locus-tag class description PB01_RS00005 PF00308 Bacterial dnaA protein PB01_RS00005 PF11638 DnaA N-terminal domain PB01_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix PB01_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain PB01_RS00010 PF02767 DNA polymerase III beta subunit, central domain PB01_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain PB01_RS00020 PF02463 RecF/RecN/SMC N terminal domain PB01_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus PB01_RS00025 PF01751 Toprim domain PB01_RS00025 PF00204 DNA gyrase B PB01_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A PB01_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller PB01_RS00035 PF01966 HD domain PB01_RS00035 PF00072 Response regulator receiver domain PB01_RS00055 PF00255 Glutathione peroxidase PB01_RS00060 PF00478 IMP dehydrogenase / GMP reductase domain PB01_RS00060 PF00571 CBS domain PB01_RS00065 PF07943 Penicillin-binding protein 5, C-terminal domain PB01_RS00065 PF00768 D-alanyl-D-alanine carboxypeptidase PB01_RS00070 PF00392 Bacterial regulatory proteins, gntR family PB01_RS00070 PF00155 Aminotransferase class I and II PB01_RS00075 PF01680 SOR/SNZ family PB01_RS00080 PF01174 SNO glutamine amidotransferase family PB01_RS00085 PF02403 Seryl-tRNA synthetase N-terminal domain PB01_RS00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PB01_RS00090 PF14437 MafB19-like deaminase PB01_RS00095 PF00704 Glycosyl hydrolases family 18 PB01_RS00095 PF01476 LysM domain PB01_RS00100 PF01712 Deoxynucleoside kinase PB01_RS00105 PF01712 Deoxynucleoside kinase PB01_RS00120 PF12169 DNA polymerase III subunits gamma and tau domain III PB01_RS00125 PF02575 YbaB/EbfC DNA-binding family PB01_RS00130 PF13662 Toprim domain PB01_RS00130 PF02132 RecR protein PB01_RS00160 PF01276 Orn/Lys/Arg decarboxylase, major domain PB01_RS00160 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain PB01_RS00165 PF02223 Thymidylate kinase PB01_RS00170 PF06153 Cyclic-di-AMP receptor PB01_RS00175 PF03885 Protein of unknown function (DUF327) PB01_RS00180 PF09115 DNA polymerase III, delta subunit, C terminal PB01_RS00185 PF04468 PSP1 C-terminal conserved region PB01_RS00190 PF06156 Initiation control protein YabA PB01_RS00195 PF05175 Methyltransferase small domain PB01_RS00200 PF01541 GIY-YIG catalytic domain PB01_RS00205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PB01_RS00210 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin PB01_RS00210 PF18277 AbrB C-terminal domain PB01_RS00215 PF01588 Putative tRNA binding domain PB01_RS00215 PF09334 tRNA synthetases class I (M) PB01_RS00215 PF08264 Anticodon-binding domain of tRNA PB01_RS00220 PF01026 TatD related DNase PB01_RS00225 PF03990 G5-linked-Ubiquitin-like domain PB01_RS00225 PF07501 G5 domain PB01_RS00225 PF06725 3D domain PB01_RS00230 PF13331 Domain of unknown function (DUF4093) PB01_RS00230 PF13662 Toprim domain PB01_RS00235 PF00398 Ribosomal RNA adenine dimethylase PB01_RS00240 PF06257 Biofilm formation stimulator VEG PB01_RS00245 PF00269 Small, acid-soluble spore proteins, alpha/beta type PB01_RS00250 PF08544 GHMP kinases C terminal PB01_RS00250 PF00288 GHMP kinases N terminal domain PB01_RS00255 PF09182 Bacterial purine repressor, N-terminal PB01_RS00255 PF00156 Phosphoribosyl transferase domain PB01_RS00260 PF01042 Endoribonuclease L-PSP PB01_RS00265 PF04026 SpoVG PB01_RS00270 PF00132 Bacterial transferase hexapeptide (six repeats) PB01_RS00270 PF00483 Nucleotidyl transferase PB01_RS00275 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PB01_RS00275 PF14572 Phosphoribosyl synthetase-associated domain PB01_RS00280 PF01386 Ribosomal L25p family PB01_RS00280 PF14693 Ribosomal protein TL5, C-terminal domain PB01_RS00285 PF01195 Peptidyl-tRNA hydrolase PB01_RS00295 PF00271 Helicase conserved C-terminal domain PB01_RS00295 PF00270 DEAD/DEAH box helicase PB01_RS00295 PF17757 UvrB interaction domain PB01_RS00295 PF03461 TRCF domain PB01_RS00295 PF02559 CarD-like/TRCF domain PB01_RS00300 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin PB01_RS00300 PF15714 Stage V sporulation protein T C-terminal, transcription factor PB01_RS00305 PF14667 Polysaccharide biosynthesis C-terminal domain PB01_RS00305 PF01943 Polysaccharide biosynthesis protein PB01_RS00310 PF03819 MazG nucleotide pyrophosphohydrolase domain PB01_RS00310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PB01_RS00315 PF01479 S4 domain PB01_RS00320 PF07873 YabP family PB01_RS00335 PF00575 S1 RNA binding domain PB01_RS00340 PF00497 Bacterial extracellular solute-binding proteins, family 3 PB01_RS00345 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS00350 PF00005 ABC transporter PB01_RS00375 PF07228 Stage II sporulation protein E (SpoIIE) PB01_RS00380 PF01171 PP-loop family PB01_RS00380 PF09179 TilS substrate binding domain PB01_RS00380 PF11734 TilS substrate C-terminal domain PB01_RS00385 PF00156 Phosphoribosyl transferase domain PB01_RS00390 PF06480 FtsH Extracellular PB01_RS00390 PF17862 AAA+ lid domain PB01_RS00390 PF01434 Peptidase family M41 PB01_RS00390 PF00004 ATPase family associated with various cellular activities (AAA) PB01_RS00395 PF03309 Type III pantothenate kinase PB01_RS00400 PF01430 Hsp33 protein PB01_RS00405 PF13145 PPIC-type PPIASE domain PB01_RS00410 PF00291 Pyridoxal-phosphate dependent enzyme PB01_RS00415 PF00425 chorismate binding enzyme PB01_RS00415 PF04715 Anthranilate synthase component I, N terminal region PB01_RS00420 PF00117 Glutamine amidotransferase class-I PB01_RS00425 PF01063 Amino-transferase class IV PB01_RS00430 PF00809 Pterin binding enzyme PB01_RS00435 PF02152 Dihydroneopterin aldolase PB01_RS00440 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PB01_RS00445 PF01381 Helix-turn-helix PB01_RS00455 PF00152 tRNA synthetases class II (D, K and N) PB01_RS00455 PF01336 OB-fold nucleic acid binding domain PB01_RS00550 PF00486 Transcriptional regulatory protein, C terminal PB01_RS00550 PF00072 Response regulator receiver domain PB01_RS00555 PF13426 PAS domain PB01_RS00555 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS00555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS00555 PF00672 HAMP domain PB01_RS00575 PF13396 Phospholipase_D-nuclease N-terminal PB01_RS00580 PF00005 ABC transporter PB01_RS00580 PF13732 Domain of unknown function (DUF4162) PB01_RS00585 PF12679 ABC-2 family transporter protein PB01_RS00600 PF13460 NAD(P)H-binding PB01_RS00605 PF00149 Calcineurin-like phosphoesterase PB01_RS00615 PF00196 Bacterial regulatory proteins, luxR family PB01_RS00615 PF00072 Response regulator receiver domain PB01_RS00620 PF07730 Histidine kinase PB01_RS00625 PF00487 Fatty acid desaturase PB01_RS00630 PF00474 Sodium:solute symporter family PB01_RS00635 PF12320 Type 5 capsule protein repressor C-terminal domain PB01_RS00635 PF00149 Calcineurin-like phosphoesterase PB01_RS00640 PF13476 AAA domain PB01_RS00645 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS00650 PF00005 ABC transporter PB01_RS00660 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 PB01_RS00665 PF03009 Glycerophosphoryl diester phosphodiesterase family PB01_RS00670 PF12368 Rhodanase C-terminal PB01_RS00670 PF17773 UPF0176 acylphosphatase like domain PB01_RS00670 PF00581 Rhodanese-like domain PB01_RS00680 PF00291 Pyridoxal-phosphate dependent enzyme PB01_RS00720 PF05036 Sporulation related domain PB01_RS00720 PF01520 N-acetylmuramoyl-L-alanine amidase PB01_RS00725 PF07702 UTRA domain PB01_RS00725 PF00392 Bacterial regulatory proteins, gntR family PB01_RS00735 PF01906 Putative heavy-metal-binding PB01_RS00745 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PB01_RS00750 PF00672 HAMP domain PB01_RS00750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS00750 PF00989 PAS fold PB01_RS00750 PF18698 Histidine kinase sensor domain PB01_RS00750 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS00755 PF00072 Response regulator receiver domain PB01_RS00755 PF00486 Transcriptional regulatory protein, C terminal PB01_RS00760 PF00072 Response regulator receiver domain PB01_RS00760 PF00990 Diguanylate cyclase, GGDEF domain PB01_RS00765 PF07729 FCD domain PB01_RS00765 PF00392 Bacterial regulatory proteins, gntR family PB01_RS00770 PF07687 Peptidase dimerisation domain PB01_RS00770 PF01546 Peptidase family M20/M25/M40 PB01_RS00775 PF03606 C4-dicarboxylate anaerobic carrier PB01_RS00780 PF01546 Peptidase family M20/M25/M40 PB01_RS00780 PF07687 Peptidase dimerisation domain PB01_RS00785 PF00106 short chain dehydrogenase PB01_RS00795 PF03466 LysR substrate binding domain PB01_RS00795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PB01_RS00800 PF09962 Uncharacterized conserved protein (DUF2196) PB01_RS00805 PF01546 Peptidase family M20/M25/M40 PB01_RS00805 PF07687 Peptidase dimerisation domain PB01_RS00810 PF03553 Na+/H+ antiporter family PB01_RS00820 PF13378 Enolase C-terminal domain-like PB01_RS00820 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PB01_RS00835 PF02445 Quinolinate synthetase A protein PB01_RS00840 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PB01_RS00840 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PB01_RS00845 PF00890 FAD binding domain PB01_RS00845 PF02910 Fumarate reductase flavoprotein C-term PB01_RS00850 PF00266 Aminotransferase class-V PB01_RS00855 PF08279 HTH domain PB01_RS00855 PF02829 3H domain PB01_RS00865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PB01_RS00865 PF00672 HAMP domain PB01_RS00865 PF02743 Cache domain PB01_RS00875 PF00893 Small Multidrug Resistance protein PB01_RS00880 PF00893 Small Multidrug Resistance protein PB01_RS00890 PF06445 GyrI-like small molecule binding domain PB01_RS00890 PF13411 MerR HTH family regulatory protein PB01_RS00895 PF07690 Major Facilitator Superfamily PB01_RS00900 PF00106 short chain dehydrogenase PB01_RS00920 PF00210 Ferritin-like domain PB01_RS00925 PF02632 BioY family PB01_RS00930 PF13193 AMP-binding enzyme C-terminal domain PB01_RS00930 PF00501 AMP-binding enzyme PB01_RS00935 PF00108 Thiolase, N-terminal domain PB01_RS00935 PF02803 Thiolase, C-terminal domain PB01_RS00955 PF00005 ABC transporter PB01_RS00960 PF00005 ABC transporter PB01_RS00965 PF02361 Cobalt transport protein PB01_RS00980 PF10672 S-adenosylmethionine-dependent methyltransferase PB01_RS00980 PF17785 PUA-like domain PB01_RS00990 PF16124 RecQ zinc-binding PB01_RS00990 PF09382 RQC domain PB01_RS00990 PF00270 DEAD/DEAH box helicase PB01_RS00990 PF00570 HRDC domain PB01_RS00990 PF00271 Helicase conserved C-terminal domain PB01_RS01000 PF00270 DEAD/DEAH box helicase PB01_RS01000 PF03880 DbpA RNA binding domain PB01_RS01000 PF00271 Helicase conserved C-terminal domain PB01_RS01005 PF13344 Haloacid dehalogenase-like hydrolase PB01_RS01005 PF00293 NUDIX domain PB01_RS01010 PF01594 AI-2E family transporter PB01_RS01025 PF02632 BioY family PB01_RS01035 PF11588 Protein of unknown function (DUF3243) PB01_RS01045 PF03949 Malic enzyme, NAD binding domain PB01_RS01045 PF00390 Malic enzyme, N-terminal domain PB01_RS01055 PF13536 Putative multidrug resistance efflux transporter PB01_RS01060 PF07687 Peptidase dimerisation domain PB01_RS01060 PF01546 Peptidase family M20/M25/M40 PB01_RS01070 PF06271 RDD family PB01_RS01095 PF02660 Glycerol-3-phosphate acyltransferase PB01_RS01100 PF01053 Cys/Met metabolism PLP-dependent enzyme PB01_RS01105 PF03447 Homoserine dehydrogenase, NAD binding domain PB01_RS01105 PF00742 Homoserine dehydrogenase PB01_RS01105 PF01842 ACT domain PB01_RS01115 PF12728 Helix-turn-helix domain PB01_RS01120 PF00892 EamA-like transporter family PB01_RS01130 PF00072 Response regulator receiver domain PB01_RS01130 PF00486 Transcriptional regulatory protein, C terminal PB01_RS01135 PF00989 PAS fold PB01_RS01135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS01135 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS01135 PF16736 Single Cache-like PB01_RS01150 PF01761 3-dehydroquinate synthase PB01_RS01150 PF01202 Shikimate kinase PB01_RS01160 PF00072 Response regulator receiver domain PB01_RS01160 PF00196 Bacterial regulatory proteins, luxR family PB01_RS01165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS01165 PF07730 Histidine kinase PB01_RS01185 PF00149 Calcineurin-like phosphoesterase PB01_RS01190 PF09335 SNARE associated Golgi protein PB01_RS01195 PF02673 Bacitracin resistance protein BacA PB01_RS01200 PF02867 Ribonucleotide reductase, barrel domain PB01_RS01200 PF00317 Ribonucleotide reductase, all-alpha domain PB01_RS01200 PF03477 ATP cone domain PB01_RS01205 PF00268 Ribonucleotide reductase, small chain PB01_RS01220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PB01_RS01220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PB01_RS01230 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PB01_RS01235 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS01240 PF00571 CBS domain PB01_RS01240 PF00005 ABC transporter PB01_RS01245 PF00990 Diguanylate cyclase, GGDEF domain PB01_RS01245 PF00563 EAL domain PB01_RS01245 PF03707 Bacterial signalling protein N terminal repeat PB01_RS01250 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PB01_RS01250 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PB01_RS01255 PF00440 Bacterial regulatory proteins, tetR family PB01_RS01255 PF08360 QacR-like protein, C-terminal region PB01_RS01260 PF00005 ABC transporter PB01_RS01260 PF13732 Domain of unknown function (DUF4162) PB01_RS01280 PF00753 Metallo-beta-lactamase superfamily PB01_RS01285 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal PB01_RS01285 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal PB01_RS01290 PF02386 Cation transport protein PB01_RS01295 PF13426 PAS domain PB01_RS01295 PF13188 PAS domain PB01_RS01295 PF00989 PAS fold PB01_RS01295 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS01295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS01300 PF17755 UvrA DNA-binding domain PB01_RS01300 PF17760 UvrA interaction domain PB01_RS01310 PF04239 Protein of unknown function (DUF421) PB01_RS01315 PF04294 VanW like protein PB01_RS01320 PF00271 Helicase conserved C-terminal domain PB01_RS01320 PF04434 SWIM zinc finger PB01_RS01320 PF00176 SNF2 family N-terminal domain PB01_RS01335 PF00293 NUDIX domain PB01_RS01340 PF00565 Staphylococcal nuclease homologue PB01_RS01340 PF05901 Excalibur calcium-binding domain PB01_RS01355 PF00145 C-5 cytosine-specific DNA methylase PB01_RS01360 PF00145 C-5 cytosine-specific DNA methylase PB01_RS01370 PF00145 C-5 cytosine-specific DNA methylase PB01_RS01375 PF00145 C-5 cytosine-specific DNA methylase PB01_RS01375 PF01381 Helix-turn-helix PB01_RS01400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PB01_RS01400 PF03466 LysR substrate binding domain PB01_RS01405 PF03606 C4-dicarboxylate anaerobic carrier PB01_RS01410 PF01546 Peptidase family M20/M25/M40 PB01_RS01415 PF00990 Diguanylate cyclase, GGDEF domain PB01_RS01425 PF00392 Bacterial regulatory proteins, gntR family PB01_RS01435 PF02361 Cobalt transport protein PB01_RS01440 PF00005 ABC transporter PB01_RS01445 PF00005 ABC transporter PB01_RS01455 PF00294 pfkB family carbohydrate kinase PB01_RS01465 PF08000 Bacterial PH domain PB01_RS01470 PF01212 Beta-eliminating lyase PB01_RS01480 PF01609 Transposase DDE domain PB01_RS01490 PF06039 Malate:quinone oxidoreductase (Mqo) PB01_RS01495 PF14489 QueF-like protein PB01_RS01500 PF06508 Queuosine biosynthesis protein QueC PB01_RS01505 PF01242 6-pyruvoyl tetrahydropterin synthase PB01_RS01510 PF04055 Radical SAM superfamily PB01_RS01520 PF01048 Phosphorylase superfamily PB01_RS01525 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain PB01_RS01525 PF04616 Glycosyl hydrolases family 43 PB01_RS01530 PF00480 ROK family PB01_RS01535 PF01547 Bacterial extracellular solute-binding protein PB01_RS01540 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS01545 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS01550 PF04854 Protein of unknown function, DUF624 PB01_RS01560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PB01_RS01560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PB01_RS01565 PF00248 Aldo/keto reductase family PB01_RS01570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PB01_RS01570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PB01_RS01575 PF01263 Aldose 1-epimerase PB01_RS01585 PF00248 Aldo/keto reductase family PB01_RS01635 PF07687 Peptidase dimerisation domain PB01_RS01635 PF01546 Peptidase family M20/M25/M40 PB01_RS01640 PF00005 ABC transporter PB01_RS01640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PB01_RS01645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PB01_RS01645 PF00005 ABC transporter PB01_RS01650 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS01655 PF12911 N-terminal TM domain of oligopeptide transport permease C PB01_RS01655 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS01660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PB01_RS01665 PF00176 SNF2 family N-terminal domain PB01_RS01665 PF00271 Helicase conserved C-terminal domain PB01_RS01670 PF11079 Bacterial protein YqhG of unknown function PB01_RS01675 PF00860 Permease family PB01_RS01680 PF01979 Amidohydrolase family PB01_RS01685 PF00300 Histidine phosphatase superfamily (branch 1) PB01_RS01690 PF01476 LysM domain PB01_RS01690 PF06725 3D domain PB01_RS01710 PF04402 Protein of unknown function (DUF541) PB01_RS01720 PF01476 LysM domain PB01_RS01720 PF00704 Glycosyl hydrolases family 18 PB01_RS01725 PF02423 Ornithine cyclodeaminase/mu-crystallin family PB01_RS01730 PF01244 Membrane dipeptidase (Peptidase family M19) PB01_RS01735 PF02129 X-Pro dipeptidyl-peptidase (S15 family) PB01_RS01735 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain PB01_RS01740 PF03773 Predicted permease PB01_RS01745 PF09323 Domain of unknown function (DUF1980) PB01_RS01750 PF07683 Cobalamin synthesis protein cobW C-terminal domain PB01_RS01750 PF02492 CobW/HypB/UreG, nucleotide-binding domain PB01_RS01770 PF01594 AI-2E family transporter PB01_RS01775 PF02769 AIR synthase related protein, C-terminal domain PB01_RS01775 PF00586 AIR synthase related protein, N-terminal domain PB01_RS01780 PF00581 Rhodanese-like domain PB01_RS01785 PF00171 Aldehyde dehydrogenase family PB01_RS01795 PF03575 Peptidase family S51 PB01_RS01810 PF00892 EamA-like transporter family PB01_RS01815 PF02583 Metal-sensitive transcriptional repressor PB01_RS01825 PF01206 Sulfurtransferase TusA PB01_RS01825 PF00581 Rhodanese-like domain PB01_RS01830 PF00581 Rhodanese-like domain PB01_RS01830 PF01206 Sulfurtransferase TusA PB01_RS01835 PF13686 DsrE/DsrF/DrsH-like family PB01_RS01840 PF00581 Rhodanese-like domain PB01_RS01840 PF00753 Metallo-beta-lactamase superfamily PB01_RS01845 PF01206 Sulfurtransferase TusA PB01_RS01850 PF01925 Sulfite exporter TauE/SafE PB01_RS01855 PF00206 Lyase PB01_RS01855 PF02655 ATP-grasp domain PB01_RS01865 PF08245 Mur ligase middle domain PB01_RS01865 PF02875 Mur ligase family, glutamate ligase domain PB01_RS01865 PF01225 Mur ligase family, catalytic domain PB01_RS01875 PF08245 Mur ligase middle domain PB01_RS01875 PF01225 Mur ligase family, catalytic domain PB01_RS01875 PF02875 Mur ligase family, glutamate ligase domain PB01_RS01880 PF02875 Mur ligase family, glutamate ligase domain PB01_RS01880 PF08245 Mur ligase middle domain PB01_RS01885 PF00877 NlpC/P60 family PB01_RS01900 PF00491 Arginase family PB01_RS01920 PF12697 Alpha/beta hydrolase family PB01_RS01930 PF01497 Periplasmic binding protein PB01_RS01940 PF13180 PDZ domain PB01_RS01960 PF03626 Prokaryotic Cytochrome C oxidase subunit IV PB01_RS01965 PF00510 Cytochrome c oxidase subunit III PB01_RS01970 PF00115 Cytochrome C and Quinol oxidase polypeptide I PB01_RS01975 PF02790 Cytochrome C oxidase subunit II, transmembrane domain PB01_RS01980 PF09844 Uncharacterized conserved protein (COG2071) PB01_RS01985 PF07690 Major Facilitator Superfamily PB01_RS01995 PF00990 Diguanylate cyclase, GGDEF domain PB01_RS01995 PF00563 EAL domain PB01_RS01995 PF00498 FHA domain PB01_RS02000 PF01061 ABC-2 type transporter PB01_RS02025 PF00664 ABC transporter transmembrane region PB01_RS02025 PF00005 ABC transporter PB01_RS02030 PF00664 ABC transporter transmembrane region PB01_RS02030 PF00005 ABC transporter PB01_RS02040 PF08827 Domain of unknown function (DUF1805) PB01_RS02045 PF01699 Sodium/calcium exchanger protein PB01_RS02050 PF00999 Sodium/hydrogen exchanger family PB01_RS02060 PF00269 Small, acid-soluble spore proteins, alpha/beta type PB01_RS02075 PF08970 Sporulation inhibitor A PB01_RS02080 PF01476 LysM domain PB01_RS02080 PF03734 L,D-transpeptidase catalytic domain PB01_RS02085 PF00221 Aromatic amino acid lyase PB01_RS02090 PF01979 Amidohydrolase family PB01_RS02095 PF01175 Urocanase Rossmann-like domain PB01_RS02095 PF17392 Urocanase C-terminal domain PB01_RS02095 PF17391 Urocanase N-terminal domain PB01_RS02105 PF08298 PrkA AAA domain PB01_RS02105 PF06798 PrkA serine protein kinase C-terminal domain PB01_RS02110 PF04285 Protein of unknown function (DUF444) PB01_RS02115 PF04293 SpoVR like protein PB01_RS02125 PF00109 Beta-ketoacyl synthase, N-terminal domain PB01_RS02125 PF02801 Beta-ketoacyl synthase, C-terminal domain PB01_RS02140 PF01212 Beta-eliminating lyase PB01_RS02155 PF13520 Amino acid permease PB01_RS02160 PF01734 Patatin-like phospholipase PB01_RS02165 PF16242 Pyridoxamine 5'-phosphate oxidase like PB01_RS02175 PF01636 Phosphotransferase enzyme family PB01_RS02180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PB01_RS02180 PF02378 Phosphotransferase system, EIIC PB01_RS02185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PB01_RS02185 PF08279 HTH domain PB01_RS02185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PB01_RS02185 PF05043 Mga helix-turn-helix domain PB01_RS02185 PF00874 PRD domain PB01_RS02190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PB01_RS02195 PF08125 Mannitol dehydrogenase C-terminal domain PB01_RS02195 PF01232 Mannitol dehydrogenase Rossmann domain PB01_RS02200 PF00381 PTS HPr component phosphorylation site PB01_RS02205 PF02896 PEP-utilising enzyme, TIM barrel domain PB01_RS02205 PF05524 PEP-utilising enzyme, N-terminal PB01_RS02205 PF00391 PEP-utilising enzyme, mobile domain PB01_RS02215 PF13188 PAS domain PB01_RS02215 PF00989 PAS fold PB01_RS02215 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS02215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS02215 PF13426 PAS domain PB01_RS02220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS02220 PF00989 PAS fold PB01_RS02220 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS02230 PF08281 Sigma-70, region 4 PB01_RS02230 PF04542 Sigma-70 region 2 PB01_RS02260 PF00892 EamA-like transporter family PB01_RS02265 PF07969 Amidohydrolase family PB01_RS02270 PF07969 Amidohydrolase family PB01_RS02275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PB01_RS02280 PF12911 N-terminal TM domain of oligopeptide transport permease C PB01_RS02280 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS02285 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS02290 PF00005 ABC transporter PB01_RS02290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PB01_RS02295 PF00005 ABC transporter PB01_RS02295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PB01_RS02300 PF06580 Histidine kinase PB01_RS02300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS02300 PF07694 5TMR of 5TMR-LYT PB01_RS02300 PF13492 GAF domain PB01_RS02305 PF00072 Response regulator receiver domain PB01_RS02305 PF04397 LytTr DNA-binding domain PB01_RS02320 PF01609 Transposase DDE domain PB01_RS02325 PF01979 Amidohydrolase family PB01_RS02330 PF01979 Amidohydrolase family PB01_RS02335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PB01_RS02340 PF07969 Amidohydrolase family PB01_RS02345 PF00072 Response regulator receiver domain PB01_RS02345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS02345 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS02345 PF09308 LuxQ, periplasmic PB01_RS02350 PF03705 CheR methyltransferase, all-alpha domain PB01_RS02350 PF01739 CheR methyltransferase, SAM binding domain PB01_RS02355 PF13426 PAS domain PB01_RS02355 PF07228 Stage II sporulation protein E (SpoIIE) PB01_RS02365 PF02810 SEC-C motif PB01_RS02365 PF05225 helix-turn-helix, Psq domain PB01_RS02370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PB01_RS02370 PF00672 HAMP domain PB01_RS02370 PF02743 Cache domain PB01_RS02375 PF09924 Uncharacterised conserved protein (DUF2156) PB01_RS02375 PF03706 Lysylphosphatidylglycerol synthase TM region PB01_RS02405 PF11490 DNA polymerase III polC-type N-terminus II PB01_RS02405 PF14480 DNA polymerase III polC-type N-terminus I PB01_RS02405 PF07733 Bacterial DNA polymerase III alpha NTPase domain PB01_RS02405 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PB01_RS02405 PF14579 Helix-hairpin-helix motif PB01_RS02405 PF02811 PHP domain PB01_RS02405 PF00929 Exonuclease PB01_RS02410 PF05746 DALR anticodon binding domain PB01_RS02410 PF00750 tRNA synthetases class I (R) PB01_RS02410 PF03485 Arginyl tRNA synthetase N terminal domain PB01_RS02435 PF02872 5'-nucleotidase, C-terminal domain PB01_RS02440 PF03576 Peptidase family S58 PB01_RS02445 PF01751 Toprim domain PB01_RS02445 PF01131 DNA topoisomerase PB01_RS02450 PF11181 Heat induced stress protein YflT PB01_RS02455 PF01613 Flavin reductase like domain PB01_RS02470 PF08241 Methyltransferase domain PB01_RS02475 PF00156 Phosphoribosyl transferase domain PB01_RS02475 PF05139 Erythromycin esterase PB01_RS02485 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family PB01_RS02495 PF03176 MMPL family PB01_RS02500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PB01_RS02500 PF00672 HAMP domain PB01_RS02505 PF01522 Polysaccharide deacetylase PB01_RS02510 PF05067 Manganese containing catalase PB01_RS02515 PF12652 CotJB protein PB01_RS02530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PB01_RS02530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PB01_RS02530 PF02770 Acyl-CoA dehydrogenase, middle domain PB01_RS02555 PF11849 Domain of unknown function (DUF3369) PB01_RS02580 PF01717 Cobalamin-independent synthase, Catalytic domain PB01_RS02590 PF00440 Bacterial regulatory proteins, tetR family PB01_RS02605 PF00171 Aldehyde dehydrogenase family PB01_RS02610 PF03435 Saccharopine dehydrogenase NADP binding domain PB01_RS02610 PF16653 Saccharopine dehydrogenase C-terminal domain PB01_RS02615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PB01_RS02615 PF02770 Acyl-CoA dehydrogenase, middle domain PB01_RS02615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PB01_RS02625 PF11738 Protein of unknown function (DUF3298) PB01_RS02625 PF01522 Polysaccharide deacetylase PB01_RS02625 PF13739 Deacetylase PdaC PB01_RS02630 PF06738 Putative threonine/serine exporter PB01_RS02635 PF12821 Threonine/Serine exporter, ThrE PB01_RS02635 PF06738 Putative threonine/serine exporter PB01_RS02640 PF00360 Phytochrome region PB01_RS02640 PF00990 Diguanylate cyclase, GGDEF domain PB01_RS02640 PF01590 GAF domain PB01_RS02640 PF00563 EAL domain PB01_RS02645 PF00892 EamA-like transporter family PB01_RS02650 PF00664 ABC transporter transmembrane region PB01_RS02650 PF00005 ABC transporter PB01_RS02655 PF00005 ABC transporter PB01_RS02655 PF00664 ABC transporter transmembrane region PB01_RS02660 PF00583 Acetyltransferase (GNAT) family PB01_RS02660 PF00814 Glycoprotease family PB01_RS02675 PF09335 SNARE associated Golgi protein PB01_RS02680 PF03009 Glycerophosphoryl diester phosphodiesterase family PB01_RS02685 PF01032 FecCD transport family PB01_RS02690 PF01032 FecCD transport family PB01_RS02695 PF01497 Periplasmic binding protein PB01_RS02700 PF00005 ABC transporter PB01_RS02705 PF07992 Pyridine nucleotide-disulphide oxidoreductase PB01_RS02715 PF12671 Putative amidase domain PB01_RS02720 PF02645 Uncharacterised protein, DegV family COG1307 PB01_RS02725 PF02660 Glycerol-3-phosphate acyltransferase PB01_RS02730 PF00990 Diguanylate cyclase, GGDEF domain PB01_RS02730 PF07694 5TMR of 5TMR-LYT PB01_RS02735 PF00881 Nitroreductase family PB01_RS02775 PF13302 Acetyltransferase (GNAT) domain PB01_RS02805 PF01546 Peptidase family M20/M25/M40 PB01_RS02805 PF07687 Peptidase dimerisation domain PB01_RS02810 PF01497 Periplasmic binding protein PB01_RS02820 PF04542 Sigma-70 region 2 PB01_RS02820 PF08281 Sigma-70, region 4 PB01_RS02825 PF12848 ABC transporter PB01_RS02825 PF00005 ABC transporter PB01_RS02840 PF13460 NAD(P)H-binding PB01_RS02845 PF03358 NADPH-dependent FMN reductase PB01_RS02855 PF08281 Sigma-70, region 4 PB01_RS02855 PF04542 Sigma-70 region 2 PB01_RS02865 PF13276 HTH-like domain PB01_RS02865 PF00665 Integrase core domain PB01_RS02865 PF13333 Integrase core domain PB01_RS02875 PF07730 Histidine kinase PB01_RS02880 PF00072 Response regulator receiver domain PB01_RS02880 PF00196 Bacterial regulatory proteins, luxR family PB01_RS02885 PF00005 ABC transporter PB01_RS02900 PF02040 Arsenical pump membrane protein PB01_RS02930 PF01131 DNA topoisomerase PB01_RS02930 PF01751 Toprim domain PB01_RS02940 PF01435 Peptidase family M48 PB01_RS02950 PF02600 Disulfide bond formation protein DsbB PB01_RS02965 PF02583 Metal-sensitive transcriptional repressor PB01_RS02970 PF00403 Heavy-metal-associated domain PB01_RS02975 PF00403 Heavy-metal-associated domain PB01_RS02980 PF07563 Protein of unknown function (DUF1541) PB01_RS02985 PF01569 PAP2 superfamily PB01_RS02995 PF04073 Aminoacyl-tRNA editing domain PB01_RS03015 PF00155 Aminotransferase class I and II PB01_RS03020 PF01370 NAD dependent epimerase/dehydratase family PB01_RS03025 PF07670 Nucleoside recognition PB01_RS03030 PF02585 GlcNAc-PI de-N-acetylase PB01_RS03035 PF08830 Protein of unknown function (DUF1806) PB01_RS03040 PF08543 Phosphomethylpyrimidine kinase PB01_RS03055 PF03167 Uracil DNA glycosylase superfamily PB01_RS03070 PF04241 Protein of unknown function (DUF423) PB01_RS03075 PF09671 Spore coat protein (Spore_GerQ) PB01_RS03080 PF07486 Cell Wall Hydrolase PB01_RS03085 PF06778 Chlorite dismutase PB01_RS03090 PF01515 Phosphate acetyl/butaryl transferase PB01_RS03095 PF03099 Biotin/lipoate A/B protein ligase family PB01_RS03105 PF07293 Protein of unknown function (DUF1450) PB01_RS03110 PF01966 HD domain PB01_RS03120 PF01361 Tautomerase enzyme PB01_RS03125 PF08741 YwhD family PB01_RS03130 PF00912 Transglycosylase PB01_RS03130 PF00905 Penicillin binding protein transpeptidase domain PB01_RS03135 PF17284 Spermidine synthase tetramerisation domain PB01_RS03140 PF00491 Arginase family PB01_RS03150 PF03485 Arginyl tRNA synthetase N terminal domain PB01_RS03150 PF00750 tRNA synthetases class I (R) PB01_RS03150 PF05746 DALR anticodon binding domain PB01_RS03160 PF01497 Periplasmic binding protein PB01_RS03165 PF01032 FecCD transport family PB01_RS03170 PF00005 ABC transporter PB01_RS03175 PF03186 CobD/Cbib protein PB01_RS03180 PF00155 Aminotransferase class I and II PB01_RS03190 PF07685 CobB/CobQ-like glutamine amidotransferase domain PB01_RS03195 PF02654 Cobalamin-5-phosphate synthase PB01_RS03210 PF01923 Cobalamin adenosyltransferase PB01_RS03230 PF13183 4Fe-4S dicluster domain PB01_RS03230 PF02754 Cysteine-rich domain PB01_RS03235 PF00108 Thiolase, N-terminal domain PB01_RS03235 PF02803 Thiolase, C-terminal domain PB01_RS03240 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PB01_RS03240 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PB01_RS03245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PB01_RS03245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PB01_RS03245 PF02770 Acyl-CoA dehydrogenase, middle domain PB01_RS03250 PF02770 Acyl-CoA dehydrogenase, middle domain PB01_RS03250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PB01_RS03250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PB01_RS03255 PF00440 Bacterial regulatory proteins, tetR family PB01_RS03255 PF13977 BetI-type transcriptional repressor, C-terminal PB01_RS03260 PF01642 Methylmalonyl-CoA mutase PB01_RS03260 PF02310 B12 binding domain PB01_RS03265 PF05066 HB1, ASXL, restriction endonuclease HTH domain PB01_RS03270 PF00117 Glutamine amidotransferase class-I PB01_RS03270 PF06418 CTP synthase N-terminus PB01_RS03280 PF00072 Response regulator receiver domain PB01_RS03285 PF01116 Fructose-bisphosphate aldolase class-II PB01_RS03290 PF00923 Transaldolase/Fructose-6-phosphate aldolase PB01_RS03295 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PB01_RS03300 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded PB01_RS03305 PF07497 Rho termination factor, RNA-binding domain PB01_RS03305 PF07498 Rho termination factor, N-terminal domain PB01_RS03305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PB01_RS03310 PF01197 Ribosomal protein L31 PB01_RS03315 PF00265 Thymidine kinase PB01_RS03320 PF03462 PCRF domain PB01_RS03320 PF00472 RF-1 domain PB01_RS03325 PF17827 PrmC N-terminal domain PB01_RS03325 PF13847 Methyltransferase domain PB01_RS03330 PF09551 Stage II sporulation protein R (spore_II_R) PB01_RS03335 PF01300 Telomere recombination PB01_RS03335 PF03481 Putative GTP-binding controlling metal-binding PB01_RS03345 PF01451 Low molecular weight phosphotyrosine protein phosphatase PB01_RS03350 PF12729 Four helix bundle sensory module for signal transduction PB01_RS03350 PF00672 HAMP domain PB01_RS03350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PB01_RS03355 PF02502 Ribose/Galactose Isomerase PB01_RS03360 PF04260 Protein of unknown function (DUF436) PB01_RS03365 PF00464 Serine hydroxymethyltransferase PB01_RS03380 PF03899 ATP synthase I chain PB01_RS03385 PF00119 ATP synthase A chain PB01_RS03390 PF00137 ATP synthase subunit C PB01_RS03395 PF00430 ATP synthase B/B' CF(0) PB01_RS03400 PF00213 ATP synthase delta (OSCP) subunit PB01_RS03405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PB01_RS03405 PF00306 ATP synthase alpha/beta chain, C terminal domain PB01_RS03405 PF02874 ATP synthase alpha/beta family, beta-barrel domain PB01_RS03410 PF00231 ATP synthase PB01_RS03415 PF02874 ATP synthase alpha/beta family, beta-barrel domain PB01_RS03415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PB01_RS03420 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PB01_RS03420 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain PB01_RS03425 PF06612 Protein of unknown function (DUF1146) PB01_RS03430 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PB01_RS03440 PF08486 Stage II sporulation protein PB01_RS03450 PF12116 Stage III sporulation protein D PB01_RS03460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PB01_RS03460 PF00460 Flagella basal body rod protein PB01_RS03465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PB01_RS03465 PF00460 Flagella basal body rod protein PB01_RS03475 PF07977 FabA-like domain PB01_RS03490 PF00436 Single-strand binding protein family PB01_RS03495 PF00271 Helicase conserved C-terminal domain PB01_RS03495 PF00176 SNF2 family N-terminal domain PB01_RS03495 PF12419 SNF2 Helicase protein PB01_RS03500 PF04434 SWIM zinc finger PB01_RS03520 PF00669 Bacterial flagellin N-terminal helical region PB01_RS03520 PF00700 Bacterial flagellin C-terminal helical region PB01_RS03525 PF03572 Peptidase family S41 PB01_RS03525 PF00595 PDZ domain PB01_RS03545 PF00474 Sodium:solute symporter family PB01_RS03550 PF00892 EamA-like transporter family PB01_RS03560 PF04542 Sigma-70 region 2 PB01_RS03570 PF02774 Semialdehyde dehydrogenase, dimerisation domain PB01_RS03570 PF01118 Semialdehyde dehydrogenase, NAD binding domain PB01_RS03575 PF01960 ArgJ family PB01_RS03580 PF00696 Amino acid kinase family PB01_RS03585 PF00202 Aminotransferase class-III PB01_RS03600 PF01381 Helix-turn-helix PB01_RS03605 PF00497 Bacterial extracellular solute-binding proteins, family 3 PB01_RS03610 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS03615 PF00005 ABC transporter PB01_RS03640 PF01061 ABC-2 type transporter PB01_RS03645 PF08239 Bacterial SH3 domain PB01_RS03645 PF00005 ABC transporter PB01_RS03650 PF00535 Glycosyl transferase family 2 PB01_RS03655 PF01050 Mannose-6-phosphate isomerase PB01_RS03655 PF00483 Nucleotidyl transferase PB01_RS03660 PF16363 GDP-mannose 4,6 dehydratase PB01_RS03665 PF16363 GDP-mannose 4,6 dehydratase PB01_RS03675 PF00483 Nucleotidyl transferase PB01_RS03680 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PB01_RS03685 PF16363 GDP-mannose 4,6 dehydratase PB01_RS03690 PF04321 RmlD substrate binding domain PB01_RS03695 PF00535 Glycosyl transferase family 2 PB01_RS03700 PF02397 Bacterial sugar transferase PB01_RS03705 PF16363 GDP-mannose 4,6 dehydratase PB01_RS03715 PF13205 Bacterial Ig-like domain PB01_RS03715 PF18058 SbsC C-terminal domain PB01_RS03735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS03735 PF07730 Histidine kinase PB01_RS03735 PF05384 Sensor protein DegS PB01_RS03740 PF00196 Bacterial regulatory proteins, luxR family PB01_RS03740 PF00072 Response regulator receiver domain PB01_RS03745 PF00082 Subtilase family PB01_RS03745 PF02225 PA domain PB01_RS03745 PF05922 Peptidase inhibitor I9 PB01_RS03745 PF13860 FlgD Ig-like domain PB01_RS03760 PF00082 Subtilase family PB01_RS03800 PF13807 G-rich domain on putative tyrosine kinase PB01_RS03800 PF02706 Chain length determinant protein PB01_RS03805 PF13614 AAA domain PB01_RS03815 PF02719 Polysaccharide biosynthesis protein PB01_RS03820 PF00483 Nucleotidyl transferase PB01_RS03825 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PB01_RS03830 PF02397 Bacterial sugar transferase PB01_RS03855 PF02719 Polysaccharide biosynthesis protein PB01_RS03855 PF08485 Polysaccharide biosynthesis protein C-terminal PB01_RS03860 PF01370 NAD dependent epimerase/dehydratase family PB01_RS03865 PF02350 UDP-N-acetylglucosamine 2-epimerase PB01_RS03870 PF00534 Glycosyl transferases group 1 PB01_RS03875 PF00534 Glycosyl transferases group 1 PB01_RS03875 PF00862 Sucrose synthase PB01_RS03895 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PB01_RS03905 PF00665 Integrase core domain PB01_RS03910 PF01695 IstB-like ATP binding protein PB01_RS03925 PF13614 AAA domain PB01_RS03940 PF07690 Major Facilitator Superfamily PB01_RS03965 PF06580 Histidine kinase PB01_RS03965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS03970 PF04397 LytTr DNA-binding domain PB01_RS03970 PF00072 Response regulator receiver domain PB01_RS03975 PF18058 SbsC C-terminal domain PB01_RS03975 PF13205 Bacterial Ig-like domain PB01_RS03980 PF13333 Integrase core domain PB01_RS03980 PF00665 Integrase core domain PB01_RS03980 PF13276 HTH-like domain PB01_RS03990 PF00356 Bacterial regulatory proteins, lacI family PB01_RS03995 PF01156 Inosine-uridine preferring nucleoside hydrolase PB01_RS04010 PF00005 ABC transporter PB01_RS04015 PF12558 ATP-binding cassette cobalt transporter PB01_RS04015 PF00005 ABC transporter PB01_RS04020 PF00294 pfkB family carbohydrate kinase PB01_RS04030 PF00665 Integrase core domain PB01_RS04030 PF13333 Integrase core domain PB01_RS04030 PF13276 HTH-like domain PB01_RS04045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PB01_RS04045 PF00205 Thiamine pyrophosphate enzyme, central domain PB01_RS04045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PB01_RS04050 PF03707 Bacterial signalling protein N terminal repeat PB01_RS04050 PF00990 Diguanylate cyclase, GGDEF domain PB01_RS04050 PF00563 EAL domain PB01_RS04075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS04075 PF00989 PAS fold PB01_RS04075 PF13188 PAS domain PB01_RS04075 PF13426 PAS domain PB01_RS04075 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS04080 PF01255 Putative undecaprenyl diphosphate synthase PB01_RS04085 PF00563 EAL domain PB01_RS04085 PF00990 Diguanylate cyclase, GGDEF domain PB01_RS04085 PF03707 Bacterial signalling protein N terminal repeat PB01_RS04105 PF01979 Amidohydrolase family PB01_RS04115 PF00381 PTS HPr component phosphorylation site PB01_RS04120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PB01_RS04125 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit PB01_RS04130 PF02378 Phosphotransferase system, EIIC PB01_RS04140 PF00149 Calcineurin-like phosphoesterase PB01_RS04140 PF02872 5'-nucleotidase, C-terminal domain PB01_RS04145 PF04231 Endonuclease I PB01_RS04170 PF04307 LexA-binding, inner membrane-associated putative hydrolase PB01_RS04175 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS04175 PF18698 Histidine kinase sensor domain PB01_RS04175 PF00989 PAS fold PB01_RS04175 PF00672 HAMP domain PB01_RS04175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS04185 PF03707 Bacterial signalling protein N terminal repeat PB01_RS04185 PF00990 Diguanylate cyclase, GGDEF domain PB01_RS04185 PF00563 EAL domain PB01_RS04195 PF00082 Subtilase family PB01_RS04195 PF02225 PA domain PB01_RS04195 PF05922 Peptidase inhibitor I9 PB01_RS04195 PF13860 FlgD Ig-like domain PB01_RS04200 PF13860 FlgD Ig-like domain PB01_RS04200 PF00082 Subtilase family PB01_RS04200 PF05922 Peptidase inhibitor I9 PB01_RS04200 PF02225 PA domain PB01_RS04205 PF00082 Subtilase family PB01_RS04205 PF06280 Fn3-like domain PB01_RS04205 PF00746 LPXTG cell wall anchor motif PB01_RS04205 PF02225 PA domain PB01_RS04225 PF05922 Peptidase inhibitor I9 PB01_RS04225 PF00082 Subtilase family PB01_RS04230 PF00196 Bacterial regulatory proteins, luxR family PB01_RS04230 PF00072 Response regulator receiver domain PB01_RS04235 PF00989 PAS fold PB01_RS04235 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS04235 PF18698 Histidine kinase sensor domain PB01_RS04235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS04235 PF00672 HAMP domain PB01_RS04240 PF00072 Response regulator receiver domain PB01_RS04245 PF00563 EAL domain PB01_RS04245 PF00990 Diguanylate cyclase, GGDEF domain PB01_RS04245 PF03707 Bacterial signalling protein N terminal repeat PB01_RS04250 PF02368 Bacterial Ig-like domain (group 2) PB01_RS04260 PF08386 TAP-like protein PB01_RS04260 PF00561 alpha/beta hydrolase fold PB01_RS04265 PF12796 Ankyrin repeats (3 copies) PB01_RS04270 PF00578 AhpC/TSA family PB01_RS04270 PF10417 C-terminal domain of 1-Cys peroxiredoxin PB01_RS04275 PF00578 AhpC/TSA family PB01_RS04280 PF14437 MafB19-like deaminase PB01_RS04285 PF07722 Peptidase C26 PB01_RS04290 PF01551 Peptidase family M23 PB01_RS04305 PF11009 Protein of unknown function (DUF2847) PB01_RS04310 PF01740 STAS domain PB01_RS04315 PF11588 Protein of unknown function (DUF3243) PB01_RS04320 PF05552 Conserved TM helix PB01_RS04325 PF00440 Bacterial regulatory proteins, tetR family PB01_RS04340 PF00392 Bacterial regulatory proteins, gntR family PB01_RS04340 PF07729 FCD domain PB01_RS04345 PF00005 ABC transporter PB01_RS04345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PB01_RS04350 PF00005 ABC transporter PB01_RS04350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PB01_RS04355 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS04360 PF12911 N-terminal TM domain of oligopeptide transport permease C PB01_RS04360 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS04365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PB01_RS04420 PF00324 Amino acid permease PB01_RS04425 PF01546 Peptidase family M20/M25/M40 PB01_RS04430 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PB01_RS04430 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PB01_RS04435 PF01476 LysM domain PB01_RS04435 PF00877 NlpC/P60 family PB01_RS04440 PF17853 GGDEF-like domain PB01_RS04440 PF05651 Putative sugar diacid recognition PB01_RS04440 PF13556 PucR C-terminal helix-turn-helix domain PB01_RS04445 PF02595 Glycerate kinase family PB01_RS04450 PF02447 GntP family permease PB01_RS04465 PF01063 Amino-transferase class IV PB01_RS04470 PF07722 Peptidase C26 PB01_RS04480 PF00486 Transcriptional regulatory protein, C terminal PB01_RS04480 PF00072 Response regulator receiver domain PB01_RS04485 PF00672 HAMP domain PB01_RS04485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS04485 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS04495 PF01619 Proline dehydrogenase PB01_RS04500 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PB01_RS04500 PF13378 Enolase C-terminal domain-like PB01_RS04510 PF07687 Peptidase dimerisation domain PB01_RS04510 PF01546 Peptidase family M20/M25/M40 PB01_RS04520 PF00478 IMP dehydrogenase / GMP reductase domain PB01_RS04530 PF00155 Aminotransferase class I and II PB01_RS04535 PF01470 Pyroglutamyl peptidase PB01_RS04540 PF02682 Carboxyltransferase domain, subdomain C and D PB01_RS04545 PF03746 LamB/YcsF family PB01_RS04550 PF02626 Carboxyltransferase domain, subdomain A and B PB01_RS04555 PF03816 Cell envelope-related transcriptional attenuator domain PB01_RS04565 PF07517 SecA DEAD-like domain PB01_RS04565 PF01043 SecA preprotein cross-linking domain PB01_RS04565 PF07516 SecA Wing and Scaffold domain PB01_RS04585 PF00953 Glycosyl transferase family 4 PB01_RS04590 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PB01_RS04600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PB01_RS04600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PB01_RS04605 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PB01_RS04605 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PB01_RS04605 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PB01_RS04625 PF02350 UDP-N-acetylglucosamine 2-epimerase PB01_RS04640 PF00534 Glycosyl transferases group 1 PB01_RS04640 PF13439 Glycosyltransferase Family 4 PB01_RS04645 PF00483 Nucleotidyl transferase PB01_RS04655 PF03816 Cell envelope-related transcriptional attenuator domain PB01_RS04660 PF01520 N-acetylmuramoyl-L-alanine amidase PB01_RS04670 PF08486 Stage II sporulation protein PB01_RS04670 PF04122 Putative cell wall binding repeat 2 PB01_RS04675 PF14504 CAP-associated N-terminal PB01_RS04675 PF00188 Cysteine-rich secretory protein family PB01_RS04680 PF09186 Domain of unknown function (DUF1949) PB01_RS04680 PF01205 Uncharacterized protein family UPF0029 PB01_RS04685 PF05384 Sensor protein DegS PB01_RS04685 PF07730 Histidine kinase PB01_RS04685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS04690 PF00196 Bacterial regulatory proteins, luxR family PB01_RS04690 PF00072 Response regulator receiver domain PB01_RS04705 PF04851 Type III restriction enzyme, res subunit PB01_RS04705 PF00271 Helicase conserved C-terminal domain PB01_RS04720 PF04316 Anti-sigma-28 factor, FlgM PB01_RS04725 PF05130 FlgN protein PB01_RS04730 PF00460 Flagella basal body rod protein PB01_RS04730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PB01_RS04735 PF00700 Bacterial flagellin C-terminal helical region PB01_RS04735 PF00669 Bacterial flagellin N-terminal helical region PB01_RS04745 PF02623 FliW protein PB01_RS04750 PF02599 Global regulator protein family PB01_RS04755 PF00669 Bacterial flagellin N-terminal helical region PB01_RS04755 PF00700 Bacterial flagellin C-terminal helical region PB01_RS04760 PF03646 FlaG protein PB01_RS04765 PF07196 Flagellin hook IN motif PB01_RS04765 PF07195 Flagellar hook-associated protein 2 C-terminus PB01_RS04765 PF02465 Flagellar hook-associated protein 2 N-terminus PB01_RS04770 PF02561 Flagellar protein FliS PB01_RS04785 PF00990 Diguanylate cyclase, GGDEF domain PB01_RS04785 PF03707 Bacterial signalling protein N terminal repeat PB01_RS04785 PF00563 EAL domain PB01_RS04790 PF01476 LysM domain PB01_RS04790 PF00877 NlpC/P60 family PB01_RS04795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PB01_RS04795 PF00672 HAMP domain PB01_RS04795 PF02743 Cache domain PB01_RS04805 PF00920 Dehydratase family PB01_RS04810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PB01_RS04810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PB01_RS04810 PF00205 Thiamine pyrophosphate enzyme, central domain PB01_RS04815 PF01842 ACT domain PB01_RS04815 PF10369 Small subunit of acetolactate synthase PB01_RS04820 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PB01_RS04820 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PB01_RS04825 PF08502 LeuA allosteric (dimerisation) domain PB01_RS04825 PF00682 HMGL-like PB01_RS04830 PF00180 Isocitrate/isopropylmalate dehydrogenase PB01_RS04835 PF00330 Aconitase family (aconitate hydratase) PB01_RS04840 PF00694 Aconitase C-terminal domain PB01_RS04845 PF13291 ACT domain PB01_RS04845 PF00291 Pyridoxal-phosphate dependent enzyme PB01_RS04850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PB01_RS04860 PF00672 HAMP domain PB01_RS04860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PB01_RS04860 PF12729 Four helix bundle sensory module for signal transduction PB01_RS04865 PF00877 NlpC/P60 family PB01_RS04875 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus PB01_RS04875 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PB01_RS04880 PF07517 SecA DEAD-like domain PB01_RS04880 PF01043 SecA preprotein cross-linking domain PB01_RS04880 PF07516 SecA Wing and Scaffold domain PB01_RS04880 PF02810 SEC-C motif PB01_RS04890 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PB01_RS04890 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PB01_RS04895 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PB01_RS04900 PF00005 ABC transporter PB01_RS04905 PF18075 FtsX extracellular domain PB01_RS04905 PF02687 FtsX-like permease family PB01_RS04910 PF01464 Transglycosylase SLT domain PB01_RS04910 PF10145 Phage-related minor tail protein PB01_RS04910 PF01551 Peptidase family M23 PB01_RS04915 PF00578 AhpC/TSA family PB01_RS04920 PF03572 Peptidase family S41 PB01_RS04920 PF17820 PDZ domain PB01_RS04920 PF01471 Putative peptidoglycan binding domain PB01_RS04925 PF17820 PDZ domain PB01_RS04930 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) PB01_RS04940 PF03591 AzlC protein PB01_RS04945 PF09335 SNARE associated Golgi protein PB01_RS04950 PF12705 PD-(D/E)XK nuclease superfamily PB01_RS04955 PF13361 UvrD-like helicase C-terminal domain PB01_RS04955 PF12705 PD-(D/E)XK nuclease superfamily PB01_RS04955 PF00580 UvrD/REP helicase N-terminal domain PB01_RS04960 PF04235 Protein of unknown function (DUF418) PB01_RS04965 PF01557 Fumarylacetoacetate (FAA) hydrolase family PB01_RS04970 PF07457 Protein of unknown function (DUF1516) PB01_RS04975 PF01373 Glycosyl hydrolase family 14 PB01_RS04975 PF03423 Carbohydrate binding domain (family 25) PB01_RS04975 PF00128 Alpha amylase, catalytic domain PB01_RS04980 PF11553 Protein of unknown function (DUF3231) PB01_RS04985 PF02645 Uncharacterised protein, DegV family COG1307 PB01_RS04995 PF00326 Prolyl oligopeptidase family PB01_RS05000 PF01883 Iron-sulfur cluster assembly protein PB01_RS05010 PF00004 ATPase family associated with various cellular activities (AAA) PB01_RS05010 PF07724 AAA domain (Cdc48 subfamily) PB01_RS05010 PF17871 AAA lid domain PB01_RS05010 PF02861 Clp amino terminal domain, pathogenicity island component PB01_RS05010 PF10431 C-terminal, D2-small domain, of ClpB protein PB01_RS05020 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PB01_RS05020 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PB01_RS05025 PF02801 Beta-ketoacyl synthase, C-terminal domain PB01_RS05025 PF00109 Beta-ketoacyl synthase, N-terminal domain PB01_RS05030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PB01_RS05030 PF00005 ABC transporter PB01_RS05035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PB01_RS05035 PF00005 ABC transporter PB01_RS05040 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS05045 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS05050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PB01_RS05055 PF00579 tRNA synthetases class I (W and Y) PB01_RS05065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PB01_RS05070 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS05075 PF12911 N-terminal TM domain of oligopeptide transport permease C PB01_RS05075 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS05080 PF00005 ABC transporter PB01_RS05080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PB01_RS05085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PB01_RS05085 PF00005 ABC transporter PB01_RS05095 PF03960 ArsC family PB01_RS05100 PF05389 Negative regulator of genetic competence (MecA) PB01_RS05110 PF01432 Peptidase family M3 PB01_RS05110 PF08439 Oligopeptidase F PB01_RS05120 PF01152 Bacterial-like globin PB01_RS05125 PF01464 Transglycosylase SLT domain PB01_RS05125 PF10145 Phage-related minor tail protein PB01_RS05125 PF01551 Peptidase family M23 PB01_RS05130 PF01928 CYTH domain PB01_RS05140 PF04607 Region found in RelA / SpoT proteins PB01_RS05145 PF01513 ATP-NAD kinase PB01_RS05150 PF00849 RNA pseudouridylate synthase PB01_RS05155 PF00571 CBS domain PB01_RS05155 PF01769 Divalent cation transporter PB01_RS05155 PF03448 MgtE intracellular N domain PB01_RS05165 PF10612 Spore coat protein Z PB01_RS05175 PF03862 SpoVAC/SpoVAEB sporulation membrane protein PB01_RS05180 PF07451 Stage V sporulation protein AD (SpoVAD) PB01_RS05185 PF03862 SpoVAC/SpoVAEB sporulation membrane protein PB01_RS05190 PF09680 Family of unknown function PB01_RS05195 PF14069 Stage VI sporulation protein F PB01_RS05225 PF02040 Arsenical pump membrane protein PB01_RS05240 PF00756 Putative esterase PB01_RS05245 PF04608 Phosphatidylglycerophosphatase A PB01_RS05250 PF00171 Aldehyde dehydrogenase family PB01_RS05255 PF05343 M42 glutamyl aminopeptidase PB01_RS05260 PF03144 Elongation factor Tu domain 2 PB01_RS05260 PF00009 Elongation factor Tu GTP binding domain PB01_RS05260 PF16658 Class II release factor RF3, C-terminal domain PB01_RS05265 PF00873 AcrB/AcrD/AcrF family PB01_RS05270 PF03741 Integral membrane protein TerC family PB01_RS05275 PF02386 Cation transport protein PB01_RS05285 PF13188 PAS domain PB01_RS05285 PF13426 PAS domain PB01_RS05285 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS05285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS05285 PF00989 PAS fold PB01_RS05290 PF01047 MarR family PB01_RS05305 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) PB01_RS05320 PF07726 ATPase family associated with various cellular activities (AAA) PB01_RS05320 PF17863 AAA lid domain PB01_RS05335 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PB01_RS05335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PB01_RS05340 PF01584 CheW-like domain PB01_RS05340 PF00072 Response regulator receiver domain PB01_RS05345 PF14177 YkyB-like protein PB01_RS05350 PF00563 EAL domain PB01_RS05350 PF03707 Bacterial signalling protein N terminal repeat PB01_RS05350 PF00990 Diguanylate cyclase, GGDEF domain PB01_RS05365 PF03466 LysR substrate binding domain PB01_RS05365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PB01_RS05375 PF00005 ABC transporter PB01_RS05390 PF17863 AAA lid domain PB01_RS05390 PF07726 ATPase family associated with various cellular activities (AAA) PB01_RS05410 PF07690 Major Facilitator Superfamily PB01_RS05415 PF13416 Bacterial extracellular solute-binding protein PB01_RS05420 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS05425 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS05430 PF08402 TOBE domain PB01_RS05430 PF00005 ABC transporter PB01_RS05435 PF01381 Helix-turn-helix PB01_RS05445 PF00578 AhpC/TSA family PB01_RS05450 PF02254 TrkA-N domain PB01_RS05450 PF02080 TrkA-C domain PB01_RS05455 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PB01_RS05455 PF00753 Metallo-beta-lactamase superfamily PB01_RS05455 PF17770 Ribonuclease J C-terminal domain PB01_RS05460 PF07288 Protein of unknown function (DUF1447) PB01_RS05470 PF00294 pfkB family carbohydrate kinase PB01_RS05475 PF01327 Polypeptide deformylase PB01_RS05485 PF00676 Dehydrogenase E1 component PB01_RS05490 PF02779 Transketolase, pyrimidine binding domain PB01_RS05490 PF02780 Transketolase, C-terminal domain PB01_RS05495 PF00364 Biotin-requiring enzyme PB01_RS05495 PF02817 e3 binding domain PB01_RS05495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PB01_RS05500 PF07992 Pyridine nucleotide-disulphide oxidoreductase PB01_RS05500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PB01_RS05505 PF00440 Bacterial regulatory proteins, tetR family PB01_RS05510 PF00873 AcrB/AcrD/AcrF family PB01_RS05520 PF03788 LrgA family PB01_RS05525 PF04172 LrgB-like family PB01_RS05530 PF01276 Orn/Lys/Arg decarboxylase, major domain PB01_RS05530 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain PB01_RS05535 PF03060 Nitronate monooxygenase PB01_RS05540 PF05256 Uncharacterised protein family (UPF0223) PB01_RS05545 PF06335 Protein of unknown function (DUF1054) PB01_RS05555 PF00459 Inositol monophosphatase family PB01_RS05565 PF14492 Elongation Factor G, domain II PB01_RS05565 PF00009 Elongation factor Tu GTP binding domain PB01_RS05565 PF03144 Elongation factor Tu domain 2 PB01_RS05565 PF00679 Elongation factor G C-terminus PB01_RS05570 PF14036 YlaH-like protein PB01_RS05575 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) PB01_RS05585 PF07408 Protein of unknown function (DUF1507) PB01_RS05590 PF01098 Cell cycle protein PB01_RS05595 PF02785 Biotin carboxylase C-terminal domain PB01_RS05595 PF00289 Biotin carboxylase, N-terminal domain PB01_RS05595 PF00364 Biotin-requiring enzyme PB01_RS05595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PB01_RS05595 PF02436 Conserved carboxylase domain PB01_RS05595 PF00682 HMGL-like PB01_RS05600 PF02628 Cytochrome oxidase assembly protein PB01_RS05605 PF01040 UbiA prenyltransferase family PB01_RS05610 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PB01_RS05610 PF00034 Cytochrome c PB01_RS05610 PF02790 Cytochrome C oxidase subunit II, transmembrane domain PB01_RS05615 PF00115 Cytochrome C and Quinol oxidase polypeptide I PB01_RS05620 PF00510 Cytochrome c oxidase subunit III PB01_RS05625 PF03626 Prokaryotic Cytochrome C oxidase subunit IV PB01_RS05630 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) PB01_RS05640 PF01594 AI-2E family transporter PB01_RS05645 PF08868 YugN-like family PB01_RS05650 PF14504 CAP-associated N-terminal PB01_RS05650 PF00188 Cysteine-rich secretory protein family PB01_RS05655 PF00696 Amino acid kinase family PB01_RS05655 PF13840 ACT domain PB01_RS05655 PF01842 ACT domain PB01_RS05660 PF01225 Mur ligase family, catalytic domain PB01_RS05660 PF02875 Mur ligase family, glutamate ligase domain PB01_RS05660 PF08245 Mur ligase middle domain PB01_RS05670 PF06133 Control of competence regulator ComK, YlbF/YmcA PB01_RS05675 PF03009 Glycerophosphoryl diester phosphodiesterase family PB01_RS05680 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) PB01_RS05700 PF01467 Cytidylyltransferase-like PB01_RS05710 PF13180 PDZ domain PB01_RS05710 PF05362 Lon protease (S16) C-terminal proteolytic domain PB01_RS05715 PF05636 HIGH Nucleotidyl Transferase PB01_RS05725 PF01783 Ribosomal L32p protein family PB01_RS05730 PF00378 Enoyl-CoA hydratase/isomerase PB01_RS05740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PB01_RS05740 PF02785 Biotin carboxylase C-terminal domain PB01_RS05740 PF00289 Biotin carboxylase, N-terminal domain PB01_RS05745 PF00364 Biotin-requiring enzyme PB01_RS05750 PF01039 Carboxyl transferase domain PB01_RS05755 PF08546 Ketopantoate reductase PanE/ApbA C terminal PB01_RS05755 PF02558 Ketopantoate reductase PanE/ApbA PB01_RS05765 PF10079 Bacillithiol biosynthesis BshC PB01_RS05770 PF02381 MraZ protein, putative antitoxin-like PB01_RS05775 PF01795 MraW methylase family PB01_RS05785 PF03793 PASTA domain PB01_RS05785 PF03717 Penicillin-binding Protein dimerisation domain PB01_RS05785 PF00905 Penicillin binding protein transpeptidase domain PB01_RS05790 PF03717 Penicillin-binding Protein dimerisation domain PB01_RS05790 PF03793 PASTA domain PB01_RS05790 PF00905 Penicillin binding protein transpeptidase domain PB01_RS05795 PF00953 Glycosyl transferase family 4 PB01_RS05800 PF02875 Mur ligase family, glutamate ligase domain PB01_RS05800 PF08245 Mur ligase middle domain PB01_RS05805 PF01098 Cell cycle protein PB01_RS05810 PF08478 POTRA domain, FtsQ-type PB01_RS05815 PF05949 Bacterial protein of unknown function (DUF881) PB01_RS05820 PF05949 Bacterial protein of unknown function (DUF881) PB01_RS05825 PF06947 Protein of unknown function (DUF1290) PB01_RS05830 PF02491 SHS2 domain inserted in FTSA PB01_RS05835 PF12327 FtsZ family, C-terminal domain PB01_RS05835 PF00091 Tubulin/FtsZ family, GTPase domain PB01_RS05845 PF04545 Sigma-70, region 4 PB01_RS05845 PF04542 Sigma-70 region 2 PB01_RS05850 PF04539 Sigma-70 region 3 PB01_RS05850 PF04542 Sigma-70 region 2 PB01_RS05850 PF04545 Sigma-70, region 4 PB01_RS05860 PF01168 Alanine racemase, N-terminal domain PB01_RS05865 PF04472 Cell division protein SepF PB01_RS05870 PF02325 YGGT family PB01_RS05875 PF17774 Putative RNA-binding domain in YlmH PB01_RS05875 PF01479 S4 domain PB01_RS05880 PF05103 DivIVA protein PB01_RS05885 PF08264 Anticodon-binding domain of tRNA PB01_RS05885 PF06827 Zinc finger found in FPG and IleRS PB01_RS05885 PF00133 tRNA synthetases class I (I, L, M and V) PB01_RS05890 PF01252 Signal peptidase (SPase) II PB01_RS05895 PF00849 RNA pseudouridylate synthase PB01_RS05895 PF01479 S4 domain PB01_RS05900 PF00156 Phosphoribosyl transferase domain PB01_RS05905 PF00860 Permease family PB01_RS05910 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PB01_RS05910 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PB01_RS05915 PF01979 Amidohydrolase family PB01_RS05920 PF00117 Glutamine amidotransferase class-I PB01_RS05920 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PB01_RS05925 PF02142 MGS-like domain PB01_RS05925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PB01_RS05925 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PB01_RS05930 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B PB01_RS05930 PF00970 Oxidoreductase FAD-binding domain PB01_RS05935 PF01180 Dihydroorotate dehydrogenase PB01_RS05940 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PB01_RS05945 PF00156 Phosphoribosyl transferase domain PB01_RS05950 PF00672 HAMP domain PB01_RS05950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PB01_RS05950 PF12729 Four helix bundle sensory module for signal transduction PB01_RS05960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PB01_RS05965 PF00005 ABC transporter PB01_RS05970 PF02687 FtsX-like permease family PB01_RS05970 PF12704 MacB-like periplasmic core domain PB01_RS05975 PF00072 Response regulator receiver domain PB01_RS05975 PF00486 Transcriptional regulatory protein, C terminal PB01_RS05980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS05980 PF00672 HAMP domain PB01_RS05980 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS05985 PF12146 Serine aminopeptidase, S33 PB01_RS05995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PB01_RS05995 PF03466 LysR substrate binding domain PB01_RS06000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PB01_RS06000 PF03466 LysR substrate binding domain PB01_RS06005 PF02567 Phenazine biosynthesis-like protein PB01_RS06015 PF00732 GMC oxidoreductase PB01_RS06015 PF05199 GMC oxidoreductase PB01_RS06020 PF02416 mttA/Hcf106 family PB01_RS06025 PF00902 Sec-independent protein translocase protein (TatC) PB01_RS06035 PF07664 Ferrous iron transport protein B C terminus PB01_RS06035 PF17910 FeoB cytosolic helical domain PB01_RS06035 PF02421 Ferrous iron transport protein B PB01_RS06035 PF07670 Nucleoside recognition PB01_RS06045 PF00486 Transcriptional regulatory protein, C terminal PB01_RS06045 PF00072 Response regulator receiver domain PB01_RS06050 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS06050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS06050 PF18719 ArlS sensor domain PB01_RS06070 PF02603 HPr Serine kinase N terminus PB01_RS06070 PF07475 HPr Serine kinase C-terminal domain PB01_RS06075 PF00005 ABC transporter PB01_RS06075 PF00664 ABC transporter transmembrane region PB01_RS06080 PF00486 Transcriptional regulatory protein, C terminal PB01_RS06080 PF00072 Response regulator receiver domain PB01_RS06085 PF18698 Histidine kinase sensor domain PB01_RS06085 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS06085 PF00989 PAS fold PB01_RS06085 PF00672 HAMP domain PB01_RS06085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS06090 PF05656 Protein of unknown function (DUF805) PB01_RS06095 PF01773 Na+ dependent nucleoside transporter N-terminus PB01_RS06095 PF07662 Na+ dependent nucleoside transporter C-terminus PB01_RS06110 PF03062 MBOAT, membrane-bound O-acyltransferase family PB01_RS06125 PF01235 Sodium:alanine symporter family PB01_RS06145 PF11132 Transcriptional regulator protein (SplA) PB01_RS06160 PF02578 Multi-copper polyphenol oxidoreductase laccase PB01_RS06180 PF01235 Sodium:alanine symporter family PB01_RS06190 PF12833 Helix-turn-helix domain PB01_RS06190 PF02805 Metal binding domain of Ada PB01_RS06200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PB01_RS06200 PF03466 LysR substrate binding domain PB01_RS06205 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PB01_RS06205 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PB01_RS06210 PF16403 Domain of unknown function (DUF5011) PB01_RS06220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PB01_RS06220 PF00672 HAMP domain PB01_RS06220 PF12729 Four helix bundle sensory module for signal transduction PB01_RS06225 PF02638 Glycosyl hydrolase-like 10 PB01_RS06230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PB01_RS06230 PF03466 LysR substrate binding domain PB01_RS06235 PF07690 Major Facilitator Superfamily PB01_RS06240 PF01476 LysM domain PB01_RS06240 PF00877 NlpC/P60 family PB01_RS06250 PF00563 EAL domain PB01_RS06250 PF00990 Diguanylate cyclase, GGDEF domain PB01_RS06250 PF03707 Bacterial signalling protein N terminal repeat PB01_RS06310 PF08281 Sigma-70, region 4 PB01_RS06310 PF04542 Sigma-70 region 2 PB01_RS06330 PF08281 Sigma-70, region 4 PB01_RS06330 PF12680 SnoaL-like domain PB01_RS06330 PF04542 Sigma-70 region 2 PB01_RS06335 PF07992 Pyridine nucleotide-disulphide oxidoreductase PB01_RS06340 PF10415 Fumarase C C-terminus PB01_RS06340 PF00206 Lyase PB01_RS06350 PF05670 NFACT protein RNA binding domain PB01_RS06355 PF00625 Guanylate kinase PB01_RS06360 PF01192 RNA polymerase Rpb6 PB01_RS06365 PF02441 Flavoprotein PB01_RS06365 PF04127 DNA / pantothenate metabolism flavoprotein PB01_RS06370 PF04851 Type III restriction enzyme, res subunit PB01_RS06370 PF00271 Helicase conserved C-terminal domain PB01_RS06370 PF17764 3′ DNA-binding domain (3′BD) PB01_RS06370 PF18074 Primosomal protein N C-terminal domain PB01_RS06370 PF18319 PriA DNA helicase Cys-rich region (CRR) domain PB01_RS06375 PF01327 Polypeptide deformylase PB01_RS06380 PF02911 Formyl transferase, C-terminal domain PB01_RS06380 PF00551 Formyl transferase PB01_RS06385 PF01029 NusB family PB01_RS06385 PF01189 16S rRNA methyltransferase RsmB/F PB01_RS06395 PF03793 PASTA domain PB01_RS06395 PF00069 Protein kinase domain PB01_RS06400 PF16745 RsgA N-terminal domain PB01_RS06400 PF03193 RsgA GTPase PB01_RS06405 PF00834 Ribulose-phosphate 3 epimerase family PB01_RS06420 PF00830 Ribosomal L28 family PB01_RS06425 PF03780 Asp23 family, cell envelope-related function PB01_RS06430 PF02734 DAK2 domain PB01_RS06430 PF13684 Dihydroxyacetone kinase family PB01_RS06435 PF01842 ACT domain PB01_RS06435 PF03315 Serine dehydratase beta chain PB01_RS06440 PF03313 Serine dehydratase alpha chain PB01_RS06445 PF17191 RecG wedge domain PB01_RS06445 PF00270 DEAD/DEAH box helicase PB01_RS06445 PF00271 Helicase conserved C-terminal domain PB01_RS06455 PF02504 Fatty acid synthesis protein PB01_RS06460 PF00698 Acyl transferase domain PB01_RS06470 PF00550 Phosphopantetheine attachment site PB01_RS06475 PF14622 Ribonuclease-III-like PB01_RS06475 PF00035 Double-stranded RNA binding motif PB01_RS06480 PF06470 SMC proteins Flexible Hinge Domain PB01_RS06480 PF02463 RecF/RecN/SMC N terminal domain PB01_RS06485 PF00448 SRP54-type protein, GTPase domain PB01_RS06485 PF02881 SRP54-type protein, helical bundle domain PB01_RS06490 PF04297 Putative helix-turn-helix protein, YlxM / p13 like PB01_RS06495 PF02978 Signal peptide binding domain PB01_RS06495 PF00448 SRP54-type protein, GTPase domain PB01_RS06495 PF02881 SRP54-type protein, helical bundle domain PB01_RS06500 PF00886 Ribosomal protein S16 PB01_RS06510 PF01782 RimM N-terminal domain PB01_RS06510 PF05239 PRC-barrel domain PB01_RS06515 PF01746 tRNA (Guanine-1)-methyltransferase PB01_RS06520 PF01245 Ribosomal protein L19 PB01_RS06525 PF10502 Signal peptidase, peptidase S26 PB01_RS06530 PF01926 50S ribosome-binding GTPase PB01_RS06535 PF01351 Ribonuclease HII PB01_RS06545 PF01312 FlhB HrpN YscU SpaS Family PB01_RS06550 PF08442 ATP-grasp domain PB01_RS06550 PF00549 CoA-ligase PB01_RS06555 PF00549 CoA-ligase PB01_RS06555 PF02629 CoA binding domain PB01_RS06565 PF02481 DNA recombination-mediator protein A PB01_RS06570 PF01396 Topoisomerase DNA binding C4 zinc finger PB01_RS06570 PF01131 DNA topoisomerase PB01_RS06570 PF01751 Toprim domain PB01_RS06575 PF01134 Glucose inhibited division protein A PB01_RS06580 PF02899 Phage integrase, N-terminal SAM-like domain PB01_RS06580 PF00589 Phage integrase family PB01_RS06585 PF00227 Proteasome subunit PB01_RS06590 PF07724 AAA domain (Cdc48 subfamily) PB01_RS06590 PF10431 C-terminal, D2-small domain, of ClpB protein PB01_RS06590 PF00004 ATPase family associated with various cellular activities (AAA) PB01_RS06595 PF08222 CodY helix-turn-helix domain PB01_RS06595 PF06018 CodY GAF-like domain PB01_RS06600 PF00460 Flagella basal body rod protein PB01_RS06605 PF00460 Flagella basal body rod protein PB01_RS06605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PB01_RS06610 PF02049 Flagellar hook-basal body complex protein FliE PB01_RS06615 PF01514 Secretory protein of YscJ/FliF family PB01_RS06615 PF08345 Flagellar M-ring protein C-terminal PB01_RS06620 PF01706 FliG C-terminal domain PB01_RS06620 PF14841 FliG middle domain PB01_RS06620 PF14842 FliG N-terminal domain PB01_RS06625 PF02108 Flagellar assembly protein FliH PB01_RS06630 PF02874 ATP synthase alpha/beta family, beta-barrel domain PB01_RS06630 PF18269 T3SS EscN ATPase C-terminal domain PB01_RS06630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PB01_RS06635 PF02050 Flagellar FliJ protein PB01_RS06650 PF03963 Flagellar hook capping protein - N-terminal region PB01_RS06660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PB01_RS06660 PF00460 Flagella basal body rod protein PB01_RS06665 PF06289 Flagellar and Swarming motility proteins PB01_RS06670 PF03748 Flagellar basal body-associated protein FliL PB01_RS06675 PF02154 Flagellar motor switch protein FliM PB01_RS06675 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PB01_RS06680 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PB01_RS06680 PF04509 CheC-like family PB01_RS06685 PF00072 Response regulator receiver domain PB01_RS06690 PF04347 Flagellar biosynthesis protein, FliO PB01_RS06695 PF00813 FliP family PB01_RS06700 PF01313 Bacterial export proteins, family 3 PB01_RS06705 PF01311 Bacterial export proteins, family 1 PB01_RS06710 PF01312 FlhB HrpN YscU SpaS Family PB01_RS06715 PF00771 FHIPEP family PB01_RS06720 PF00448 SRP54-type protein, GTPase domain PB01_RS06725 PF10609 NUBPL iron-transfer P-loop NTPase PB01_RS06730 PF00072 Response regulator receiver domain PB01_RS06730 PF01339 CheB methylesterase PB01_RS06735 PF01584 CheW-like domain PB01_RS06735 PF02895 Signal transducing histidine kinase, homodimeric domain PB01_RS06735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS06735 PF01627 Hpt domain PB01_RS06735 PF07194 P2 response regulator binding domain PB01_RS06740 PF01584 CheW-like domain PB01_RS06745 PF04509 CheC-like family PB01_RS06750 PF03975 CheD chemotactic sensory transduction PB01_RS06760 PF04542 Sigma-70 region 2 PB01_RS06760 PF04539 Sigma-70 region 3 PB01_RS06760 PF04545 Sigma-70, region 4 PB01_RS06775 PF00318 Ribosomal protein S2 PB01_RS06780 PF00889 Elongation factor TS PB01_RS06785 PF00696 Amino acid kinase family PB01_RS06790 PF01765 Ribosome recycling factor PB01_RS06795 PF01255 Putative undecaprenyl diphosphate synthase PB01_RS06805 PF13288 DXP reductoisomerase C-terminal domain PB01_RS06805 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PB01_RS06805 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PB01_RS06810 PF02163 Peptidase family M50 PB01_RS06810 PF13180 PDZ domain PB01_RS06815 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PB01_RS06815 PF11490 DNA polymerase III polC-type N-terminus II PB01_RS06815 PF14480 DNA polymerase III polC-type N-terminus I PB01_RS06815 PF14579 Helix-hairpin-helix motif PB01_RS06815 PF07733 Bacterial DNA polymerase III alpha NTPase domain PB01_RS06815 PF02811 PHP domain PB01_RS06815 PF00929 Exonuclease PB01_RS06820 PF02576 RimP N-terminal domain PB01_RS06820 PF17384 RimP C-terminal SH3 domain PB01_RS06825 PF13184 NusA-like KH domain PB01_RS06825 PF00575 S1 RNA binding domain PB01_RS06825 PF08529 NusA N-terminal domain PB01_RS06830 PF04296 Protein of unknown function (DUF448) PB01_RS06835 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PB01_RS06840 PF00009 Elongation factor Tu GTP binding domain PB01_RS06840 PF11987 Translation-initiation factor 2 PB01_RS06840 PF04760 Translation initiation factor IF-2, N-terminal region PB01_RS06845 PF04456 Protein of unknown function (DUF503) PB01_RS06850 PF02033 Ribosome-binding factor A PB01_RS06855 PF01509 TruB family pseudouridylate synthase (N terminal domain) PB01_RS06855 PF16198 tRNA pseudouridylate synthase B C-terminal domain PB01_RS06860 PF06574 FAD synthetase PB01_RS06860 PF01687 Riboflavin kinase PB01_RS06865 PF00312 Ribosomal protein S15 PB01_RS06870 PF03725 3' exoribonuclease family, domain 2 PB01_RS06870 PF01138 3' exoribonuclease family, domain 1 PB01_RS06870 PF00575 S1 RNA binding domain PB01_RS06870 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PB01_RS06870 PF00013 KH domain PB01_RS06875 PF05193 Peptidase M16 inactive domain PB01_RS06875 PF00675 Insulinase (Peptidase family M16) PB01_RS06890 PF02441 Flavoprotein PB01_RS06895 PF01118 Semialdehyde dehydrogenase, NAD binding domain PB01_RS06895 PF02774 Semialdehyde dehydrogenase, dimerisation domain PB01_RS06900 PF00701 Dihydrodipicolinate synthetase family PB01_RS06905 PF17770 Ribonuclease J C-terminal domain PB01_RS06905 PF00753 Metallo-beta-lactamase superfamily PB01_RS06905 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PB01_RS06910 PF17854 FtsK alpha domain PB01_RS06910 PF09397 Ftsk gamma domain PB01_RS06910 PF01580 FtsK/SpoIIIE family PB01_RS06915 PF07702 UTRA domain PB01_RS06915 PF00392 Bacterial regulatory proteins, gntR family PB01_RS06920 PF02608 ABC transporter substrate-binding protein PnrA-like PB01_RS06925 PF00005 ABC transporter PB01_RS06930 PF02653 Branched-chain amino acid transport system / permease component PB01_RS06935 PF02653 Branched-chain amino acid transport system / permease component PB01_RS06940 PF05193 Peptidase M16 inactive domain PB01_RS06945 PF05193 Peptidase M16 inactive domain PB01_RS06945 PF00675 Insulinase (Peptidase family M16) PB01_RS06955 PF11868 Protein of unknown function (DUF3388) PB01_RS06960 PF13464 Domain of unknown function (DUF4115) PB01_RS06965 PF01066 CDP-alcohol phosphatidyltransferase PB01_RS06970 PF18146 Damage-inducible protein CinA KH domain PB01_RS06970 PF00994 Probable molybdopterin binding domain PB01_RS06970 PF02464 Competence-damaged protein PB01_RS06975 PF00154 recA bacterial DNA recombination protein PB01_RS06980 PF01966 HD domain PB01_RS06980 PF12072 Domain of unknown function (DUF3552) PB01_RS06980 PF00013 KH domain PB01_RS06985 PF13277 YmdB-like protein PB01_RS06990 PF04232 Stage V sporulation protein S (SpoVS) PB01_RS06995 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PB01_RS06995 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase PB01_RS06995 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II PB01_RS07000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PB01_RS07005 PF01938 TRAM domain PB01_RS07005 PF00919 Uncharacterized protein family UPF0004 PB01_RS07005 PF04055 Radical SAM superfamily PB01_RS07010 PF06133 Control of competence regulator ComK, YlbF/YmcA PB01_RS07020 PF07690 Major Facilitator Superfamily PB01_RS07025 PF02898 Nitric oxide synthase, oxygenase domain PB01_RS07030 PF07690 Major Facilitator Superfamily PB01_RS07035 PF00005 ABC transporter PB01_RS07055 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PB01_RS07060 PF10628 Outer spore coat protein E (CotE) PB01_RS07065 PF05188 MutS domain II PB01_RS07065 PF00488 MutS domain V PB01_RS07065 PF05190 MutS family domain IV PB01_RS07065 PF01624 MutS domain I PB01_RS07065 PF05192 MutS domain III PB01_RS07070 PF01119 DNA mismatch repair protein, C-terminal domain PB01_RS07070 PF08676 MutL C terminal dimerisation domain PB01_RS07075 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PB01_RS07075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PB01_RS07080 PF16901 C-terminal domain of alpha-glycerophosphate oxidase PB01_RS07080 PF01266 FAD dependent oxidoreductase PB01_RS07095 PF17209 Hfq protein PB01_RS07100 PF00581 Rhodanese-like domain PB01_RS07105 PF06838 Methionine gamma-lyase PB01_RS07110 PF13411 MerR HTH family regulatory protein PB01_RS07115 PF00120 Glutamine synthetase, catalytic domain PB01_RS07115 PF03951 Glutamine synthetase, beta-Grasp domain PB01_RS07140 PF00497 Bacterial extracellular solute-binding proteins, family 3 PB01_RS07145 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS07150 PF00005 ABC transporter PB01_RS07165 PF00717 Peptidase S24-like PB01_RS07165 PF01726 LexA DNA binding domain PB01_RS07175 PF00239 Resolvase, N terminal domain PB01_RS07180 PF05979 Bacterial protein of unknown function (DUF896) PB01_RS07185 PF00456 Transketolase, thiamine diphosphate binding domain PB01_RS07185 PF02780 Transketolase, C-terminal domain PB01_RS07185 PF02779 Transketolase, pyrimidine binding domain PB01_RS07190 PF03672 Uncharacterised protein family (UPF0154) PB01_RS07195 PF12146 Serine aminopeptidase, S33 PB01_RS07200 PF00682 HMGL-like PB01_RS07205 PF02803 Thiolase, C-terminal domain PB01_RS07205 PF00108 Thiolase, N-terminal domain PB01_RS07220 PF03466 LysR substrate binding domain PB01_RS07220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PB01_RS07225 PF00488 MutS domain V PB01_RS07225 PF05192 MutS domain III PB01_RS07225 PF05188 MutS domain II PB01_RS07225 PF01624 MutS domain I PB01_RS07225 PF05190 MutS family domain IV PB01_RS07230 PF13302 Acetyltransferase (GNAT) domain PB01_RS07235 PF13419 Haloacid dehalogenase-like hydrolase PB01_RS07255 PF00248 Aldo/keto reductase family PB01_RS07260 PF00293 NUDIX domain PB01_RS07270 PF01475 Ferric uptake regulator family PB01_RS07275 PF02899 Phage integrase, N-terminal SAM-like domain PB01_RS07275 PF00589 Phage integrase family PB01_RS07280 PF01676 Metalloenzyme superfamily PB01_RS07285 PF00591 Glycosyl transferase family, a/b domain PB01_RS07285 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain PB01_RS07285 PF02885 Glycosyl transferase family, helical bundle domain PB01_RS07290 PF04542 Sigma-70 region 2 PB01_RS07290 PF08281 Sigma-70, region 4 PB01_RS07295 PF07454 Stage II sporulation protein P (SpoIIP) PB01_RS07300 PF01740 STAS domain PB01_RS07305 PF13581 Histidine kinase-like ATPase domain PB01_RS07310 PF04542 Sigma-70 region 2 PB01_RS07310 PF04539 Sigma-70 region 3 PB01_RS07310 PF04545 Sigma-70, region 4 PB01_RS07315 PF03323 Bacillus/Clostridium GerA spore germination protein PB01_RS07320 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PB01_RS07320 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PB01_RS07325 PF00583 Acetyltransferase (GNAT) family PB01_RS07330 PF03745 Domain of unknown function (DUF309) PB01_RS07335 PF02616 Segregation and condensation protein ScpA PB01_RS07340 PF04079 Segregation and condensation complex subunit ScpB PB01_RS07345 PF07943 Penicillin-binding protein 5, C-terminal domain PB01_RS07345 PF00768 D-alanyl-D-alanine carboxypeptidase PB01_RS07350 PF01479 S4 domain PB01_RS07350 PF00849 RNA pseudouridylate synthase PB01_RS07355 PF00578 AhpC/TSA family PB01_RS07360 PF05140 ResB-like family PB01_RS07365 PF01578 Cytochrome C assembly protein PB01_RS07370 PF00072 Response regulator receiver domain PB01_RS07370 PF00486 Transcriptional regulatory protein, C terminal PB01_RS07375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS07375 PF00989 PAS fold PB01_RS07375 PF18698 Histidine kinase sensor domain PB01_RS07375 PF00672 HAMP domain PB01_RS07375 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS07380 PF08281 Sigma-70, region 4 PB01_RS07380 PF04542 Sigma-70 region 2 PB01_RS07390 PF12822 ECF transporter, substrate-specific component PB01_RS07405 PF00271 Helicase conserved C-terminal domain PB01_RS07405 PF00270 DEAD/DEAH box helicase PB01_RS07410 PF01476 LysM domain PB01_RS07420 PF00149 Calcineurin-like phosphoesterase PB01_RS07430 PF17763 Glutaminase/Asparaginase C-terminal domain PB01_RS07430 PF00710 Asparaginase, N-terminal PB01_RS07435 PF13367 PrsW family intramembrane metalloprotease PB01_RS07440 PF01471 Putative peptidoglycan binding domain PB01_RS07440 PF07486 Cell Wall Hydrolase PB01_RS07445 PF03413 Peptidase propeptide and YPEB domain PB01_RS07445 PF14620 YpeB sporulation PB01_RS07455 PF02224 Cytidylate kinase PB01_RS07460 PF01553 Acyltransferase PB01_RS07465 PF00575 S1 RNA binding domain PB01_RS07510 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PB01_RS07510 PF01926 50S ribosome-binding GTPase PB01_RS07515 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PB01_RS07515 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PB01_RS07530 PF09547 Stage IV sporulation protein A (spore_IV_A) PB01_RS07535 PF00216 Bacterial DNA-binding protein PB01_RS07540 PF01227 GTP cyclohydrolase I PB01_RS07545 PF02081 Tryptophan RNA-binding attenuator protein PB01_RS07550 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 PB01_RS07555 PF01209 ubiE/COQ5 methyltransferase family PB01_RS07560 PF00348 Polyprenyl synthetase PB01_RS07565 PF00334 Nucleoside diphosphate kinase PB01_RS07570 PF03705 CheR methyltransferase, all-alpha domain PB01_RS07570 PF01739 CheR methyltransferase, SAM binding domain PB01_RS07575 PF01264 Chorismate synthase PB01_RS07580 PF01761 3-dehydroquinate synthase PB01_RS07585 PF07736 Chorismate mutase type I PB01_RS07590 PF00155 Aminotransferase class I and II PB01_RS07595 PF01842 ACT domain PB01_RS07595 PF02153 Prephenate dehydrogenase PB01_RS07600 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PB01_RS07610 PF08864 UPF0302 domain PB01_RS07610 PF08858 IDEAL domain PB01_RS07620 PF00355 Rieske [2Fe-2S] domain PB01_RS07625 PF00033 Cytochrome b/b6/petB PB01_RS07630 PF00032 Cytochrome b(C-terminal)/b6/petD PB01_RS07630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PB01_RS07635 PF07187 Protein of unknown function (DUF1405) PB01_RS07640 PF04298 Putative neutral zinc metallopeptidase PB01_RS07645 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PB01_RS07645 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PB01_RS07650 PF03819 MazG nucleotide pyrophosphohydrolase domain PB01_RS07655 PF01113 Dihydrodipicolinate reductase, N-terminus PB01_RS07655 PF05173 Dihydrodipicolinate reductase, C-terminus PB01_RS07660 PF02142 MGS-like domain PB01_RS07665 PF13439 Glycosyltransferase Family 4 PB01_RS07665 PF00534 Glycosyl transferases group 1 PB01_RS07670 PF12627 Probable RNA and SrmB- binding site of polymerase A PB01_RS07670 PF01743 Poly A polymerase head domain PB01_RS07670 PF13735 tRNA nucleotidyltransferase domain 2 putative PB01_RS07675 PF08279 HTH domain PB01_RS07675 PF03099 Biotin/lipoate A/B protein ligase family PB01_RS07675 PF02237 Biotin protein ligase C terminal domain PB01_RS07680 PF02548 Ketopantoate hydroxymethyltransferase PB01_RS07685 PF02569 Pantoate-beta-alanine ligase PB01_RS07690 PF02261 Aspartate decarboxylase PB01_RS07695 PF00929 Exonuclease PB01_RS07695 PF04851 Type III restriction enzyme, res subunit PB01_RS07695 PF13307 Helicase C-terminal domain PB01_RS07700 PF14084 Protein of unknown function (DUF4264) PB01_RS07710 PF00152 tRNA synthetases class II (D, K and N) PB01_RS07710 PF01336 OB-fold nucleic acid binding domain PB01_RS07715 PF07261 Replication initiation and membrane attachment PB01_RS07720 PF00730 HhH-GPD superfamily base excision DNA repair protein PB01_RS07720 PF10576 Iron-sulfur binding domain of endonuclease III PB01_RS07720 PF00633 Helix-hairpin-helix motif PB01_RS07730 PF00912 Transglycosylase PB01_RS07730 PF00905 Penicillin binding protein transpeptidase domain PB01_RS07735 PF03838 Recombination protein U PB01_RS07745 PF09369 Domain of unknown function (DUF1998) PB01_RS07745 PF00271 Helicase conserved C-terminal domain PB01_RS07745 PF00270 DEAD/DEAH box helicase PB01_RS07750 PF13482 RNase_H superfamily PB01_RS07755 PF05103 DivIVA protein PB01_RS07765 PF03707 Bacterial signalling protein N terminal repeat PB01_RS07765 PF00990 Diguanylate cyclase, GGDEF domain PB01_RS07765 PF00563 EAL domain PB01_RS07770 PF01170 Putative RNA methylase family UPF0020 PB01_RS07770 PF02926 THUMP domain PB01_RS07775 PF13307 Helicase C-terminal domain PB01_RS07780 PF02074 Carboxypeptidase Taq (M32) metallopeptidase PB01_RS07805 PF09125 Cytochrome C oxidase subunit II, transmembrane PB01_RS07805 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PB01_RS07820 PF00350 Dynamin family PB01_RS07825 PF00581 Rhodanese-like domain PB01_RS07835 PF04055 Radical SAM superfamily PB01_RS07850 PF00005 ABC transporter PB01_RS07855 PF06628 Catalase-related immune-responsive PB01_RS07855 PF00199 Catalase PB01_RS07860 PF00585 C-terminal regulatory domain of Threonine dehydratase PB01_RS07860 PF00291 Pyridoxal-phosphate dependent enzyme PB01_RS07865 PF03358 NADPH-dependent FMN reductase PB01_RS07870 PF00117 Glutamine amidotransferase class-I PB01_RS07875 PF00977 Histidine biosynthesis protein PB01_RS07895 PF02457 DisA bacterial checkpoint controller nucleotide-binding PB01_RS07895 PF10372 Bacterial membrane-spanning protein N-terminus PB01_RS07905 PF07875 Coat F domain PB01_RS07915 PF06908 YspA SLOG family PB01_RS07920 PF02515 CoA-transferase family III PB01_RS07925 PF01070 FMN-dependent dehydrogenase PB01_RS07930 PF00378 Enoyl-CoA hydratase/isomerase PB01_RS07935 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS07940 PF09383 NIL domain PB01_RS07940 PF00005 ABC transporter PB01_RS07945 PF03180 NLPA lipoprotein PB01_RS07955 PF00155 Aminotransferase class I and II PB01_RS07960 PF00589 Phage integrase family PB01_RS07960 PF02899 Phage integrase, N-terminal SAM-like domain PB01_RS07965 PF01381 Helix-turn-helix PB01_RS08065 PF17854 FtsK alpha domain PB01_RS08065 PF01580 FtsK/SpoIIIE family PB01_RS08065 PF13491 4TM region of DNA translocase FtsK/SpoIIIE PB01_RS08065 PF09397 Ftsk gamma domain PB01_RS08120 PF10145 Phage-related minor tail protein PB01_RS08120 PF01464 Transglycosylase SLT domain PB01_RS08120 PF01551 Peptidase family M23 PB01_RS08230 PF00795 Carbon-nitrogen hydrolase PB01_RS08240 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PB01_RS08240 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PB01_RS08245 PF11700 Vacuole effluxer Atg22 like PB01_RS08260 PF07690 Major Facilitator Superfamily PB01_RS08270 PF13458 Periplasmic binding protein PB01_RS08275 PF02653 Branched-chain amino acid transport system / permease component PB01_RS08280 PF11862 Domain of unknown function (DUF3382) PB01_RS08280 PF02653 Branched-chain amino acid transport system / permease component PB01_RS08285 PF00005 ABC transporter PB01_RS08285 PF12399 Branched-chain amino acid ATP-binding cassette transporter PB01_RS08290 PF00005 ABC transporter PB01_RS08295 PF00990 Diguanylate cyclase, GGDEF domain PB01_RS08300 PF09375 Imelysin PB01_RS08305 PF04261 Dyp-type peroxidase family PB01_RS08305 PF10518 TAT (twin-arginine translocation) pathway signal sequence PB01_RS08310 PF03239 Iron permease FTR1 family PB01_RS08320 PF02566 OsmC-like protein PB01_RS08330 PF07969 Amidohydrolase family PB01_RS08340 PF03630 Fumble PB01_RS08345 PF00313 'Cold-shock' DNA-binding domain PB01_RS08355 PF13456 Reverse transcriptase-like PB01_RS08365 PF00313 'Cold-shock' DNA-binding domain PB01_RS08370 PF01047 MarR family PB01_RS08375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PB01_RS08380 PF00296 Luciferase-like monooxygenase PB01_RS08385 PF03358 NADPH-dependent FMN reductase PB01_RS08395 PF03358 NADPH-dependent FMN reductase PB01_RS08410 PF03466 LysR substrate binding domain PB01_RS08410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PB01_RS08430 PF01966 HD domain PB01_RS08435 PF00005 ABC transporter PB01_RS08435 PF16326 ABC transporter C-terminal domain PB01_RS08435 PF12848 ABC transporter PB01_RS08440 PF08712 Scaffold protein Nfu/NifU N terminal PB01_RS08440 PF13769 Virulence factor PB01_RS08445 PF03466 LysR substrate binding domain PB01_RS08445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PB01_RS08450 PF12146 Serine aminopeptidase, S33 PB01_RS08475 PF09680 Family of unknown function PB01_RS08480 PF13302 Acetyltransferase (GNAT) domain PB01_RS08525 PF01695 IstB-like ATP binding protein PB01_RS08550 PF07883 Cupin domain PB01_RS08600 PF13243 Squalene-hopene cyclase C-terminal domain PB01_RS08600 PF13249 Squalene-hopene cyclase N-terminal domain PB01_RS08605 PF08863 YolD-like protein PB01_RS08610 PF06491 Disulphide isomerase PB01_RS08620 PF14005 YpjP-like protein PB01_RS08675 PF00303 Thymidylate synthase PB01_RS08680 PF00186 Dihydrofolate reductase PB01_RS08685 PF02645 Uncharacterised protein, DegV family COG1307 PB01_RS08690 PF13472 GDSL-like Lipase/Acylhydrolase family PB01_RS08700 PF01625 Peptide methionine sulfoxide reductase PB01_RS08705 PF01641 SelR domain PB01_RS08710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PB01_RS08710 PF00672 HAMP domain PB01_RS08710 PF02743 Cache domain PB01_RS08715 PF06855 YozE SAM-like fold PB01_RS08720 PF01048 Phosphorylase superfamily PB01_RS08725 PF17820 PDZ domain PB01_RS08725 PF01471 Putative peptidoglycan binding domain PB01_RS08725 PF03572 Peptidase family S41 PB01_RS08730 PF07683 Cobalamin synthesis protein cobW C-terminal domain PB01_RS08730 PF02492 CobW/HypB/UreG, nucleotide-binding domain PB01_RS08740 PF00188 Cysteine-rich secretory protein family PB01_RS08745 PF03323 Bacillus/Clostridium GerA spore germination protein PB01_RS08760 PF01554 MatE PB01_RS08765 PF03033 Glycosyltransferase family 28 N-terminal domain PB01_RS08765 PF04101 Glycosyltransferase family 28 C-terminal domain PB01_RS08775 PF00072 Response regulator receiver domain PB01_RS08775 PF00486 Transcriptional regulatory protein, C terminal PB01_RS08780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS08780 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS08780 PF18719 ArlS sensor domain PB01_RS08785 PF16078 2-oxoglutarate dehydrogenase N-terminus PB01_RS08785 PF00676 Dehydrogenase E1 component PB01_RS08785 PF16870 2-oxoglutarate dehydrogenase C-terminal PB01_RS08785 PF02779 Transketolase, pyrimidine binding domain PB01_RS08790 PF02817 e3 binding domain PB01_RS08790 PF00364 Biotin-requiring enzyme PB01_RS08790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PB01_RS08800 PF07728 AAA domain (dynein-related subfamily) PB01_RS08805 PF00092 von Willebrand factor type A domain PB01_RS08810 PF05816 Toxic anion resistance protein (TelA) PB01_RS08815 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein PB01_RS08830 PF00313 'Cold-shock' DNA-binding domain PB01_RS08835 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain PB01_RS08835 PF01740 STAS domain PB01_RS08845 PF00005 ABC transporter PB01_RS08845 PF12848 ABC transporter PB01_RS08850 PF01625 Peptide methionine sulfoxide reductase PB01_RS08855 PF03816 Cell envelope-related transcriptional attenuator domain PB01_RS08860 PF01594 AI-2E family transporter PB01_RS08875 PF00005 ABC transporter PB01_RS08875 PF12848 ABC transporter PB01_RS08875 PF16326 ABC transporter C-terminal domain PB01_RS08880 PF04204 Homoserine O-succinyltransferase PB01_RS08885 PF00248 Aldo/keto reductase family PB01_RS08905 PF00293 NUDIX domain PB01_RS08935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PB01_RS08945 PF13419 Haloacid dehalogenase-like hydrolase PB01_RS08960 PF12841 YvrJ protein family PB01_RS08965 PF04545 Sigma-70, region 4 PB01_RS08970 PF18801 response regulator aspartate phosphatase H, N terminal PB01_RS08980 PF13411 MerR HTH family regulatory protein PB01_RS09050 PF00589 Phage integrase family PB01_RS09050 PF02899 Phage integrase, N-terminal SAM-like domain PB01_RS09090 PF00583 Acetyltransferase (GNAT) family PB01_RS09125 PF04542 Sigma-70 region 2 PB01_RS09125 PF08281 Sigma-70, region 4 PB01_RS09155 PF00005 ABC transporter PB01_RS09160 PF01433 Peptidase family M1 domain PB01_RS09160 PF11838 ERAP1-like C-terminal domain PB01_RS09185 PF03551 Transcriptional regulator PadR-like family PB01_RS09205 PF04542 Sigma-70 region 2 PB01_RS09205 PF08281 Sigma-70, region 4 PB01_RS09255 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) PB01_RS09310 PF00155 Aminotransferase class I and II PB01_RS09315 PF01678 Diaminopimelate epimerase PB01_RS09320 PF00120 Glutamine synthetase, catalytic domain PB01_RS09320 PF03951 Glutamine synthetase, beta-Grasp domain PB01_RS09325 PF13537 Glutamine amidotransferase domain PB01_RS09325 PF00733 Asparagine synthase PB01_RS09355 PF07690 Major Facilitator Superfamily PB01_RS09370 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) PB01_RS09390 PF10502 Signal peptidase, peptidase S26 PB01_RS09395 PF00133 tRNA synthetases class I (I, L, M and V) PB01_RS09395 PF08264 Anticodon-binding domain of tRNA PB01_RS09400 PF00149 Calcineurin-like phosphoesterase PB01_RS09405 PF00480 ROK family PB01_RS09420 PF04715 Anthranilate synthase component I, N terminal region PB01_RS09420 PF00425 chorismate binding enzyme PB01_RS09425 PF02885 Glycosyl transferase family, helical bundle domain PB01_RS09425 PF00591 Glycosyl transferase family, a/b domain PB01_RS09430 PF00218 Indole-3-glycerol phosphate synthase PB01_RS09435 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PB01_RS09440 PF00291 Pyridoxal-phosphate dependent enzyme PB01_RS09445 PF00290 Tryptophan synthase alpha chain PB01_RS09450 PF07690 Major Facilitator Superfamily PB01_RS09455 PF01810 LysE type translocator PB01_RS09485 PF01553 Acyltransferase PB01_RS09500 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PB01_RS09500 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PB01_RS09505 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase PB01_RS09510 PF02954 Bacterial regulatory protein, Fis family PB01_RS09510 PF00158 Sigma-54 interaction domain PB01_RS09510 PF13426 PAS domain PB01_RS09515 PF05525 Branched-chain amino acid transport protein PB01_RS09520 PF03323 Bacillus/Clostridium GerA spore germination protein PB01_RS09525 PF05504 Spore germination B3/ GerAC like, C-terminal PB01_RS09540 PF02899 Phage integrase, N-terminal SAM-like domain PB01_RS09540 PF00589 Phage integrase family PB01_RS09545 PF13302 Acetyltransferase (GNAT) domain PB01_RS09555 PF00583 Acetyltransferase (GNAT) family PB01_RS09580 PF00753 Metallo-beta-lactamase superfamily PB01_RS09580 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PB01_RS09580 PF17770 Ribonuclease J C-terminal domain PB01_RS09585 PF07885 Ion channel PB01_RS09615 PF00521 DNA gyrase/topoisomerase IV, subunit A PB01_RS09615 PF03989 DNA gyrase C-terminal domain, beta-propeller PB01_RS09620 PF00986 DNA gyrase B subunit, carboxyl terminus PB01_RS09620 PF01751 Toprim domain PB01_RS09620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS09620 PF00204 DNA gyrase B PB01_RS09625 PF02660 Glycerol-3-phosphate acyltransferase PB01_RS09640 PF03061 Thioesterase superfamily PB01_RS09645 PF13193 AMP-binding enzyme C-terminal domain PB01_RS09645 PF00501 AMP-binding enzyme PB01_RS09660 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PB01_RS09660 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PB01_RS09670 PF02653 Branched-chain amino acid transport system / permease component PB01_RS09675 PF00005 ABC transporter PB01_RS09680 PF00005 ABC transporter PB01_RS09680 PF12399 Branched-chain amino acid ATP-binding cassette transporter PB01_RS09695 PF13302 Acetyltransferase (GNAT) domain PB01_RS09705 PF00694 Aconitase C-terminal domain PB01_RS09705 PF00330 Aconitase family (aconitate hydratase) PB01_RS09715 PF08756 YfkB-like domain PB01_RS09715 PF04055 Radical SAM superfamily PB01_RS09720 PF00857 Isochorismatase family PB01_RS09735 PF02630 SCO1/SenC PB01_RS09755 PF11084 Protein of unknown function (DUF2621) PB01_RS09760 PF07301 Protein of unknown function (DUF1453) PB01_RS09765 PF00072 Response regulator receiver domain PB01_RS09770 PF02683 Cytochrome C biogenesis protein transmembrane region PB01_RS09775 PF00664 ABC transporter transmembrane region PB01_RS09775 PF00005 ABC transporter PB01_RS09780 PF00005 ABC transporter PB01_RS09780 PF00664 ABC transporter transmembrane region PB01_RS09785 PF00266 Aminotransferase class-V PB01_RS09805 PF01381 Helix-turn-helix PB01_RS09815 PF10990 Protein of unknown function (DUF2809) PB01_RS09825 PF00190 Cupin PB01_RS09835 PF08241 Methyltransferase domain PB01_RS09845 PF08281 Sigma-70, region 4 PB01_RS09845 PF04542 Sigma-70 region 2 PB01_RS09850 PF00293 NUDIX domain PB01_RS09850 PF13344 Haloacid dehalogenase-like hydrolase PB01_RS09900 PF00817 impB/mucB/samB family PB01_RS09900 PF11798 IMS family HHH motif PB01_RS09900 PF11799 impB/mucB/samB family C-terminal domain PB01_RS09910 PF00885 6,7-dimethyl-8-ribityllumazine synthase PB01_RS09915 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PB01_RS09915 PF00925 GTP cyclohydrolase II PB01_RS09920 PF00677 Lumazine binding domain PB01_RS09940 PF08281 Sigma-70, region 4 PB01_RS09940 PF04542 Sigma-70 region 2 PB01_RS09950 PF02824 TGS domain PB01_RS09950 PF04607 Region found in RelA / SpoT proteins PB01_RS09950 PF13291 ACT domain PB01_RS09960 PF01022 Bacterial regulatory protein, arsR family PB01_RS09965 PF08327 Activator of Hsp90 ATPase homolog 1-like protein PB01_RS09970 PF01022 Bacterial regulatory protein, arsR family PB01_RS09975 PF00480 ROK family PB01_RS09975 PF01325 Iron dependent repressor, N-terminal DNA binding domain PB01_RS09980 PF01263 Aldose 1-epimerase PB01_RS09985 PF01566 Natural resistance-associated macrophage protein PB01_RS09990 PF04294 VanW like protein PB01_RS09995 PF00149 Calcineurin-like phosphoesterase PB01_RS10000 PF03633 Glycosyl hydrolase family 65, C-terminal domain PB01_RS10000 PF03632 Glycosyl hydrolase family 65 central catalytic domain PB01_RS10000 PF03636 Glycosyl hydrolase family 65, N-terminal domain PB01_RS10005 PF13419 Haloacid dehalogenase-like hydrolase PB01_RS10010 PF00356 Bacterial regulatory proteins, lacI family PB01_RS10020 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS10025 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS10035 PF03632 Glycosyl hydrolase family 65 central catalytic domain PB01_RS10035 PF03633 Glycosyl hydrolase family 65, C-terminal domain PB01_RS10035 PF03636 Glycosyl hydrolase family 65, N-terminal domain PB01_RS10060 PF00005 ABC transporter PB01_RS10060 PF03459 TOBE domain PB01_RS10060 PF17912 MalK OB fold domain PB01_RS10065 PF13556 PucR C-terminal helix-turn-helix domain PB01_RS10070 PF14698 Argininosuccinate lyase C-terminal PB01_RS10070 PF00206 Lyase PB01_RS10075 PF00764 Arginosuccinate synthase PB01_RS10080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PB01_RS10095 PF07883 Cupin domain PB01_RS10095 PF01381 Helix-turn-helix PB01_RS10120 PF13607 Succinyl-CoA ligase like flavodoxin domain PB01_RS10120 PF00583 Acetyltransferase (GNAT) family PB01_RS10120 PF13380 CoA binding domain PB01_RS10125 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PB01_RS10135 PF01695 IstB-like ATP binding protein PB01_RS10140 PF00665 Integrase core domain PB01_RS10190 PF00300 Histidine phosphatase superfamily (branch 1) PB01_RS10200 PF00293 NUDIX domain PB01_RS10200 PF13344 Haloacid dehalogenase-like hydrolase PB01_RS10210 PF01636 Phosphotransferase enzyme family PB01_RS10240 PF01274 Malate synthase PB01_RS10245 PF00860 Permease family PB01_RS10255 PF05899 Protein of unknown function (DUF861) PB01_RS10255 PF07883 Cupin domain PB01_RS10260 PF01546 Peptidase family M20/M25/M40 PB01_RS10265 PF01979 Amidohydrolase family PB01_RS10270 PF01979 Amidohydrolase family PB01_RS10275 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PB01_RS10280 PF00266 Aminotransferase class-V PB01_RS10285 PF17853 GGDEF-like domain PB01_RS10285 PF13556 PucR C-terminal helix-turn-helix domain PB01_RS10285 PF07905 Purine catabolism regulatory protein-like family PB01_RS10295 PF00690 Cation transporter/ATPase, N-terminus PB01_RS10295 PF00689 Cation transporting ATPase, C-terminus PB01_RS10300 PF01040 UbiA prenyltransferase family PB01_RS10305 PF07992 Pyridine nucleotide-disulphide oxidoreductase PB01_RS10305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PB01_RS10325 PF13538 UvrD-like helicase C-terminal domain PB01_RS10335 PF13302 Acetyltransferase (GNAT) domain PB01_RS10350 PF01938 TRAM domain PB01_RS10350 PF05958 tRNA (Uracil-5-)-methyltransferase PB01_RS10350 PF13847 Methyltransferase domain PB01_RS10355 PF01207 Dihydrouridine synthase (Dus) PB01_RS10360 PF09084 NMT1/THI5 like PB01_RS10365 PF01910 Thiamine-binding protein PB01_RS10370 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS10375 PF00005 ABC transporter PB01_RS10395 PF13472 GDSL-like Lipase/Acylhydrolase family PB01_RS10410 PF01641 SelR domain PB01_RS10410 PF01625 Peptide methionine sulfoxide reductase PB01_RS10425 PF07992 Pyridine nucleotide-disulphide oxidoreductase PB01_RS10430 PF07849 Protein of unknown function (DUF1641) PB01_RS10445 PF00717 Peptidase S24-like PB01_RS10445 PF12802 MarR family PB01_RS10460 PF02525 Flavodoxin-like fold PB01_RS10470 PF08741 YwhD family PB01_RS10475 PF00037 4Fe-4S binding domain PB01_RS10490 PF07690 Major Facilitator Superfamily PB01_RS10495 PF00072 Response regulator receiver domain PB01_RS10495 PF00196 Bacterial regulatory proteins, luxR family PB01_RS10530 PF01435 Peptidase family M48 PB01_RS10530 PF16491 CAAX prenyl protease N-terminal, five membrane helices PB01_RS10540 PF10502 Signal peptidase, peptidase S26 PB01_RS10550 PF13427 Domain of unknown function (DUF4111) PB01_RS10550 PF01909 Nucleotidyltransferase domain PB01_RS10575 PF13243 Squalene-hopene cyclase C-terminal domain PB01_RS10575 PF13249 Squalene-hopene cyclase N-terminal domain PB01_RS10630 PF13302 Acetyltransferase (GNAT) domain PB01_RS10650 PF14437 MafB19-like deaminase PB01_RS10665 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal PB01_RS10665 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal PB01_RS10690 PF07690 Major Facilitator Superfamily PB01_RS10695 PF01638 HxlR-like helix-turn-helix PB01_RS10700 PF00248 Aldo/keto reductase family PB01_RS10725 PF00440 Bacterial regulatory proteins, tetR family PB01_RS10760 PF00440 Bacterial regulatory proteins, tetR family PB01_RS10765 PF13460 NAD(P)H-binding PB01_RS10790 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) PB01_RS10790 PF01348 Type II intron maturase PB01_RS10795 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) PB01_RS10820 PF04542 Sigma-70 region 2 PB01_RS10820 PF08281 Sigma-70, region 4 PB01_RS10890 PF00589 Phage integrase family PB01_RS10890 PF02899 Phage integrase, N-terminal SAM-like domain PB01_RS10925 PF01348 Type II intron maturase PB01_RS10925 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) PB01_RS10930 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) PB01_RS10935 PF03358 NADPH-dependent FMN reductase PB01_RS10935 PF00890 FAD binding domain PB01_RS10935 PF04205 FMN-binding domain PB01_RS10945 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) PB01_RS10950 PF01494 FAD binding domain PB01_RS10955 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PB01_RS10955 PF01872 RibD C-terminal domain PB01_RS10960 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PB01_RS10960 PF00925 GTP cyclohydrolase II PB01_RS10970 PF00144 Beta-lactamase PB01_RS10975 PF13419 Haloacid dehalogenase-like hydrolase PB01_RS10980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PB01_RS10985 PF07977 FabA-like domain PB01_RS11010 PF00155 Aminotransferase class I and II PB01_RS11010 PF00392 Bacterial regulatory proteins, gntR family PB01_RS11015 PF09388 Spo0E like sporulation regulatory protein PB01_RS11030 PF00106 short chain dehydrogenase PB01_RS11035 PF00753 Metallo-beta-lactamase superfamily PB01_RS11040 PF03807 NADP oxidoreductase coenzyme F420-dependent PB01_RS11040 PF14748 Pyrroline-5-carboxylate reductase dimerisation PB01_RS11045 PF12706 Beta-lactamase superfamily domain PB01_RS11045 PF00753 Metallo-beta-lactamase superfamily PB01_RS11050 PF00817 impB/mucB/samB family PB01_RS11050 PF11798 IMS family HHH motif PB01_RS11050 PF11799 impB/mucB/samB family C-terminal domain PB01_RS11055 PF01584 CheW-like domain PB01_RS11060 PF01546 Peptidase family M20/M25/M40 PB01_RS11060 PF07687 Peptidase dimerisation domain PB01_RS11065 PF01039 Carboxyl transferase domain PB01_RS11080 PF01609 Transposase DDE domain PB01_RS11085 PF06491 Disulphide isomerase PB01_RS11095 PF01642 Methylmalonyl-CoA mutase PB01_RS11095 PF02310 B12 binding domain PB01_RS11100 PF01642 Methylmalonyl-CoA mutase PB01_RS11130 PF00583 Acetyltransferase (GNAT) family PB01_RS11135 PF07690 Major Facilitator Superfamily PB01_RS11155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS11155 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS11185 PF00583 Acetyltransferase (GNAT) family PB01_RS11190 PF00485 Phosphoribulokinase / Uridine kinase family PB01_RS11220 PF10997 Alternate to MurJ PB01_RS11250 PF03193 RsgA GTPase PB01_RS11255 PF02696 Uncharacterized ACR, YdiU/UPF0061 family PB01_RS11290 PF01098 Cell cycle protein PB01_RS11300 PF08281 Sigma-70, region 4 PB01_RS11300 PF04542 Sigma-70 region 2 PB01_RS11325 PF07690 Major Facilitator Superfamily PB01_RS11330 PF01047 MarR family PB01_RS11335 PF00296 Luciferase-like monooxygenase PB01_RS11340 PF03180 NLPA lipoprotein PB01_RS11345 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS11350 PF09383 NIL domain PB01_RS11350 PF00005 ABC transporter PB01_RS11355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PB01_RS11355 PF02817 e3 binding domain PB01_RS11355 PF00364 Biotin-requiring enzyme PB01_RS11360 PF02780 Transketolase, C-terminal domain PB01_RS11360 PF02779 Transketolase, pyrimidine binding domain PB01_RS11365 PF00676 Dehydrogenase E1 component PB01_RS11370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PB01_RS11370 PF07992 Pyridine nucleotide-disulphide oxidoreductase PB01_RS11375 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PB01_RS11375 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PB01_RS11380 PF02954 Bacterial regulatory protein, Fis family PB01_RS11380 PF00158 Sigma-54 interaction domain PB01_RS11380 PF00989 PAS fold PB01_RS11390 PF03009 Glycerophosphoryl diester phosphodiesterase family PB01_RS11400 PF08769 Sporulation initiation factor Spo0A C terminal PB01_RS11400 PF00072 Response regulator receiver domain PB01_RS11405 PF17820 PDZ domain PB01_RS11405 PF05580 SpoIVB peptidase S55 PB01_RS11410 PF02463 RecF/RecN/SMC N terminal domain PB01_RS11415 PF01316 Arginine repressor, DNA binding domain PB01_RS11415 PF02863 Arginine repressor, C-terminal domain PB01_RS11420 PF01728 FtsJ-like methyltransferase PB01_RS11420 PF01479 S4 domain PB01_RS11425 PF02779 Transketolase, pyrimidine binding domain PB01_RS11425 PF02780 Transketolase, C-terminal domain PB01_RS11425 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PB01_RS11430 PF00348 Polyprenyl synthetase PB01_RS11435 PF02609 Exonuclease VII small subunit PB01_RS11440 PF02601 Exonuclease VII, large subunit PB01_RS11440 PF13742 OB-fold nucleic acid binding domain PB01_RS11445 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PB01_RS11445 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PB01_RS11450 PF01029 NusB family PB01_RS11455 PF03780 Asp23 family, cell envelope-related function PB01_RS11460 PF02785 Biotin carboxylase C-terminal domain PB01_RS11460 PF00289 Biotin carboxylase, N-terminal domain PB01_RS11460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PB01_RS11465 PF00364 Biotin-requiring enzyme PB01_RS11470 PF12685 SpoIIIAH-like protein PB01_RS11495 PF09285 Elongation factor P, C-terminal PB01_RS11495 PF01132 Elongation factor P (EF-P) OB domain PB01_RS11495 PF08207 Elongation factor P (EF-P) KOW-like domain PB01_RS11500 PF01321 Creatinase/Prolidase N-terminal domain PB01_RS11500 PF00557 Metallopeptidase family M24 PB01_RS11510 PF03477 ATP cone domain PB01_RS11510 PF02867 Ribonucleotide reductase, barrel domain PB01_RS11510 PF00317 Ribonucleotide reductase, all-alpha domain PB01_RS11515 PF03099 Biotin/lipoate A/B protein ligase family PB01_RS11520 PF00581 Rhodanese-like domain PB01_RS11525 PF02347 Glycine cleavage system P-protein PB01_RS11530 PF02347 Glycine cleavage system P-protein PB01_RS11535 PF01571 Aminomethyltransferase folate-binding domain PB01_RS11535 PF08669 Glycine cleavage T-protein C-terminal barrel domain PB01_RS11540 PF01202 Shikimate kinase PB01_RS11560 PF07963 Prokaryotic N-terminal methylation motif PB01_RS11565 PF07963 Prokaryotic N-terminal methylation motif PB01_RS11570 PF00482 Type II secretion system (T2SS), protein F PB01_RS11575 PF00437 Type II/IV secretion system protein PB01_RS11580 PF11117 Protein of unknown function (DUF2626) PB01_RS11585 PF00753 Metallo-beta-lactamase superfamily PB01_RS11590 PF10958 Protein of unknown function (DUF2759) PB01_RS11600 PF00884 Sulfatase PB01_RS11610 PF01812 5-formyltetrahydrofolate cyclo-ligase family PB01_RS11615 PF00471 Ribosomal protein L33 PB01_RS11635 PF01895 PhoU domain PB01_RS11640 PF00005 ABC transporter PB01_RS11645 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS11650 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS11655 PF12849 PBP superfamily domain PB01_RS11660 PF00905 Penicillin binding protein transpeptidase domain PB01_RS11660 PF03717 Penicillin-binding Protein dimerisation domain PB01_RS11665 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PB01_RS11665 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PB01_RS11670 PF04306 Protein of unknown function (DUF456) PB01_RS11675 PF02690 Na+/Pi-cotransporter PB01_RS11690 PF04551 GcpE protein PB01_RS11700 PF00963 Cohesin domain PB01_RS11700 PF01522 Polysaccharide deacetylase PB01_RS11705 PF01475 Ferric uptake regulator family PB01_RS11710 PF00950 ABC 3 transport family PB01_RS11715 PF00005 ABC transporter PB01_RS11725 PF01261 Xylose isomerase-like TIM barrel PB01_RS11730 PF00270 DEAD/DEAH box helicase PB01_RS11730 PF00271 Helicase conserved C-terminal domain PB01_RS11740 PF02401 LytB protein PB01_RS11745 PF01784 NIF3 (NGG1p interacting factor 3) PB01_RS11750 PF04816 tRNA (adenine(22)-N(1))-methyltransferase PB01_RS11755 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PB01_RS11760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PB01_RS11760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PB01_RS11760 PF02770 Acyl-CoA dehydrogenase, middle domain PB01_RS11770 PF03979 Sigma-70 factor, region 1.1 PB01_RS11770 PF00140 Sigma-70 factor, region 1.2 PB01_RS11770 PF04545 Sigma-70, region 4 PB01_RS11770 PF04539 Sigma-70 region 3 PB01_RS11770 PF04542 Sigma-70 region 2 PB01_RS11775 PF01807 CHC2 zinc finger PB01_RS11775 PF10410 DnaB-helicase binding domain of primase PB01_RS11775 PF08275 DNA primase catalytic core, N-terminal domain PB01_RS11780 PF03618 Kinase/pyrophosphorylase PB01_RS11785 PF00571 CBS domain PB01_RS11785 PF08279 HTH domain PB01_RS11790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PB01_RS11790 PF03129 Anticodon binding domain PB01_RS11795 PF11967 Recombination protein O N terminal PB01_RS11795 PF02565 Recombination protein O C terminal PB01_RS11800 PF01926 50S ribosome-binding GTPase PB01_RS11800 PF07650 KH domain PB01_RS11805 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PB01_RS11810 PF01219 Prokaryotic diacylglycerol kinase PB01_RS11815 PF02130 Uncharacterized protein family UPF0054 PB01_RS11820 PF07698 7TM receptor with intracellular HD hydrolase PB01_RS11820 PF07697 7TM-HD extracellular PB01_RS11820 PF01966 HD domain PB01_RS11825 PF01609 Transposase DDE domain PB01_RS11830 PF02562 PhoH-like protein PB01_RS11850 PF12127 SigmaW regulon antibacterial PB01_RS11855 PF01972 Serine dehydrogenase proteinase PB01_RS11855 PF01957 NfeD-like C-terminal, partner-binding PB01_RS11860 PF01165 Ribosomal protein S21 PB01_RS11865 PF01791 DeoC/LacD family aldolase PB01_RS11870 PF04055 Radical SAM superfamily PB01_RS11870 PF01938 TRAM domain PB01_RS11870 PF00919 Uncharacterized protein family UPF0004 PB01_RS11875 PF04452 RNA methyltransferase PB01_RS11885 PF00226 DnaJ domain PB01_RS11885 PF01556 DnaJ C terminal domain PB01_RS11885 PF00684 DnaJ central domain PB01_RS11890 PF00012 Hsp70 protein PB01_RS11895 PF01025 GrpE PB01_RS11900 PF01628 HrcA protein C terminal domain PB01_RS11905 PF04055 Radical SAM superfamily PB01_RS11905 PF06969 HemN C-terminal domain PB01_RS11910 PF00679 Elongation factor G C-terminus PB01_RS11910 PF06421 GTP-binding protein LepA C-terminus PB01_RS11910 PF03144 Elongation factor Tu domain 2 PB01_RS11910 PF00009 Elongation factor Tu GTP binding domain PB01_RS11920 PF03418 Germination protease PB01_RS11925 PF01649 Ribosomal protein S20 PB01_RS11930 PF06144 DNA polymerase III, delta subunit PB01_RS11935 PF14141 YqzM-like protein PB01_RS11940 PF03772 Competence protein PB01_RS11940 PF13567 Domain of unknown function (DUF4131) PB01_RS11940 PF00753 Metallo-beta-lactamase superfamily PB01_RS11945 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PB01_RS11950 PF10531 SLBB domain PB01_RS11955 PF13649 Methyltransferase domain PB01_RS11965 PF01966 HD domain PB01_RS11970 PF01467 Cytidylyltransferase-like PB01_RS11975 PF01985 CRS1 / YhbY (CRM) domain PB01_RS11980 PF01488 Shikimate / quinate 5-dehydrogenase PB01_RS11980 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PB01_RS11980 PF08501 Shikimate dehydrogenase substrate binding domain PB01_RS11985 PF01926 50S ribosome-binding GTPase PB01_RS11995 PF02666 Phosphatidylserine decarboxylase PB01_RS12000 PF01066 CDP-alcohol phosphatidyltransferase PB01_RS12005 PF04542 Sigma-70 region 2 PB01_RS12005 PF04545 Sigma-70, region 4 PB01_RS12010 PF01048 Phosphorylase superfamily PB01_RS12020 PF01272 Transcription elongation factor, GreA/GreB, C-term PB01_RS12020 PF03449 Transcription elongation factor, N-terminal PB01_RS12025 PF00485 Phosphoribulokinase / Uridine kinase family PB01_RS12030 PF01136 Peptidase family U32 PB01_RS12030 PF16325 Peptidase family U32 C-terminal domain PB01_RS12035 PF01136 Peptidase family U32 PB01_RS12040 PF01596 O-methyltransferase PB01_RS12045 PF02618 YceG-like family PB01_RS12050 PF06949 Protein of unknown function (DUF1292) PB01_RS12055 PF03652 Holliday junction resolvase PB01_RS12060 PF06135 IreB regulatory phosphoprotein PB01_RS12065 PF02272 DHHA1 domain PB01_RS12065 PF01411 tRNA synthetases class II (A) PB01_RS12065 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PB01_RS12070 PF13538 UvrD-like helicase C-terminal domain PB01_RS12070 PF14490 Helix-hairpin-helix containing domain PB01_RS12070 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain PB01_RS12075 PF07719 Tetratricopeptide repeat PB01_RS12075 PF13181 Tetratricopeptide repeat PB01_RS12085 PF00266 Aminotransferase class-V PB01_RS12090 PF02082 Transcriptional regulator PB01_RS12095 PF16193 AAA C-terminal domain PB01_RS12095 PF12002 MgsA AAA+ ATPase C terminal PB01_RS12095 PF05496 Holliday junction DNA helicase RuvB P-loop domain PB01_RS12105 PF00899 ThiF family PB01_RS12115 PF02938 GAD domain PB01_RS12115 PF00152 tRNA synthetases class II (D, K and N) PB01_RS12115 PF01336 OB-fold nucleic acid binding domain PB01_RS12120 PF13393 Histidyl-tRNA synthetase PB01_RS12120 PF03129 Anticodon binding domain PB01_RS12125 PF08239 Bacterial SH3 domain PB01_RS12125 PF01520 N-acetylmuramoyl-L-alanine amidase PB01_RS12130 PF02580 D-Tyr-tRNA(Tyr) deacylase PB01_RS12135 PF02824 TGS domain PB01_RS12135 PF04607 Region found in RelA / SpoT proteins PB01_RS12135 PF13291 ACT domain PB01_RS12140 PF00156 Phosphoribosyl transferase domain PB01_RS12145 PF10141 Single-strand DNA-specific exonuclease, C terminal domain PB01_RS12145 PF02272 DHHA1 domain PB01_RS12145 PF01368 DHH family PB01_RS12145 PF17768 RecJ OB domain PB01_RS12150 PF06305 Lipopolysaccharide assembly protein A domain PB01_RS12155 PF07549 SecD/SecF GG Motif PB01_RS12155 PF02355 Protein export membrane protein PB01_RS12165 PF01943 Polysaccharide biosynthesis protein PB01_RS12165 PF14667 Polysaccharide biosynthesis C-terminal domain PB01_RS12170 PF04239 Protein of unknown function (DUF421) PB01_RS12175 PF02699 Preprotein translocase subunit PB01_RS12180 PF01702 Queuine tRNA-ribosyltransferase PB01_RS12185 PF02547 Queuosine biosynthesis protein PB01_RS12190 PF05491 RuvB C-terminal winged helix domain PB01_RS12190 PF17864 RuvB AAA lid domain PB01_RS12190 PF05496 Holliday junction DNA helicase RuvB P-loop domain PB01_RS12195 PF01330 RuvA N terminal domain PB01_RS12195 PF07499 RuvA, C-terminal domain PB01_RS12210 PF00800 Prephenate dehydratase PB01_RS12210 PF01842 ACT domain PB01_RS12220 PF09269 Domain of unknown function (DUF1967) PB01_RS12220 PF01018 GTP1/OBG PB01_RS12220 PF01926 50S ribosome-binding GTPase PB01_RS12230 PF01016 Ribosomal L27 protein PB01_RS12235 PF04327 Cysteine protease Prp PB01_RS12240 PF00829 Ribosomal prokaryotic L21 protein PB01_RS12245 PF02163 Peptidase family M50 PB01_RS12255 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PB01_RS12260 PF03775 Septum formation inhibitor MinC, C-terminal domain PB01_RS12270 PF04085 rod shape-determining protein MreC PB01_RS12280 PF04002 RadC-like JAB domain PB01_RS12285 PF02545 Maf-like protein PB01_RS12295 PF06750 Bacterial Peptidase A24 N-terminal domain PB01_RS12295 PF01478 Type IV leader peptidase family PB01_RS12300 PF00990 Diguanylate cyclase, GGDEF domain PB01_RS12300 PF17151 Periplasmic sensor domain PB01_RS12325 PF00482 Type II secretion system (T2SS), protein F PB01_RS12330 PF00437 Type II/IV secretion system protein PB01_RS12335 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PB01_RS12335 PF00437 Type II/IV secretion system protein PB01_RS12360 PF00990 Diguanylate cyclase, GGDEF domain PB01_RS12360 PF00072 Response regulator receiver domain PB01_RS12365 PF08245 Mur ligase middle domain PB01_RS12365 PF02875 Mur ligase family, glutamate ligase domain PB01_RS12370 PF08443 RimK-like ATP-grasp domain PB01_RS12380 PF00133 tRNA synthetases class I (I, L, M and V) PB01_RS12380 PF08264 Anticodon-binding domain of tRNA PB01_RS12380 PF10458 Valyl tRNA synthetase tRNA binding arm PB01_RS12395 PF00202 Aminotransferase class-III PB01_RS12400 PF00490 Delta-aminolevulinic acid dehydratase PB01_RS12410 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PB01_RS12410 PF03900 Porphobilinogen deaminase, C-terminal domain PB01_RS12415 PF01578 Cytochrome C assembly protein PB01_RS12420 PF01488 Shikimate / quinate 5-dehydrogenase PB01_RS12420 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PB01_RS12420 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PB01_RS12425 PF01926 50S ribosome-binding GTPase PB01_RS12430 PF02190 ATP-dependent protease La (LON) substrate-binding domain PB01_RS12430 PF05362 Lon protease (S16) C-terminal proteolytic domain PB01_RS12430 PF00004 ATPase family associated with various cellular activities (AAA) PB01_RS12435 PF10431 C-terminal, D2-small domain, of ClpB protein PB01_RS12435 PF06689 ClpX C4-type zinc finger PB01_RS12435 PF07724 AAA domain (Cdc48 subfamily) PB01_RS12440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PB01_RS12440 PF05697 Bacterial trigger factor protein (TF) PB01_RS12440 PF05698 Bacterial trigger factor protein (TF) C-terminus PB01_RS12470 PF07969 Amidohydrolase family PB01_RS12485 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PB01_RS12490 PF01180 Dihydroorotate dehydrogenase PB01_RS12495 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PB01_RS12495 PF07992 Pyridine nucleotide-disulphide oxidoreductase PB01_RS12500 PF01979 Amidohydrolase family PB01_RS12505 PF07687 Peptidase dimerisation domain PB01_RS12505 PF01546 Peptidase family M20/M25/M40 PB01_RS12510 PF00202 Aminotransferase class-III PB01_RS12515 PF00171 Aldehyde dehydrogenase family PB01_RS12530 PF12850 Calcineurin-like phosphoesterase superfamily domain PB01_RS12535 PF01725 Ham1 family PB01_RS12540 PF03725 3' exoribonuclease family, domain 2 PB01_RS12540 PF01138 3' exoribonuclease family, domain 1 PB01_RS12545 PF01177 Asp/Glu/Hydantoin racemase PB01_RS12550 PF01047 MarR family PB01_RS12555 PF00196 Bacterial regulatory proteins, luxR family PB01_RS12560 PF03061 Thioesterase superfamily PB01_RS12565 PF13183 4Fe-4S dicluster domain PB01_RS12565 PF13085 2Fe-2S iron-sulfur cluster binding domain PB01_RS12570 PF02910 Fumarate reductase flavoprotein C-term PB01_RS12570 PF00890 FAD binding domain PB01_RS12575 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PB01_RS12580 PF10702 Protein of unknown function (DUF2507) PB01_RS12590 PF00696 Amino acid kinase family PB01_RS12590 PF13840 ACT domain PB01_RS12595 PF01541 GIY-YIG catalytic domain PB01_RS12595 PF02151 UvrB/uvrC motif PB01_RS12595 PF08459 UvrC Helix-hairpin-helix N-terminal PB01_RS12600 PF00085 Thioredoxin PB01_RS12605 PF00766 Electron transfer flavoprotein FAD-binding domain PB01_RS12605 PF01012 Electron transfer flavoprotein domain PB01_RS12610 PF01012 Electron transfer flavoprotein domain PB01_RS12615 PF00378 Enoyl-CoA hydratase/isomerase PB01_RS12620 PF00440 Bacterial regulatory proteins, tetR family PB01_RS12620 PF08359 YsiA-like protein, C-terminal region PB01_RS12625 PF13193 AMP-binding enzyme C-terminal domain PB01_RS12625 PF00501 AMP-binding enzyme PB01_RS12630 PF03994 Domain of Unknown Function (DUF350) PB01_RS12635 PF00488 MutS domain V PB01_RS12635 PF01713 Smr domain PB01_RS12640 PF14716 Helix-hairpin-helix domain PB01_RS12640 PF02811 PHP domain PB01_RS12640 PF14791 DNA polymerase beta thumb PB01_RS12650 PF05164 Cell division protein ZapA PB01_RS12655 PF11858 Domain of unknown function (DUF3378) PB01_RS12655 PF01351 Ribonuclease HII PB01_RS12660 PF04963 Sigma-54 factor, core binding domain PB01_RS12660 PF04552 Sigma-54, DNA binding domain PB01_RS12660 PF00309 Sigma-54 factor, Activator interacting domain (AID) PB01_RS12670 PF07687 Peptidase dimerisation domain PB01_RS12670 PF01546 Peptidase family M20/M25/M40 PB01_RS12675 PF00221 Aromatic amino acid lyase PB01_RS12680 PF07687 Peptidase dimerisation domain PB01_RS12680 PF01546 Peptidase family M20/M25/M40 PB01_RS12685 PF01979 Amidohydrolase family PB01_RS12695 PF00005 ABC transporter PB01_RS12700 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS12705 PF00497 Bacterial extracellular solute-binding proteins, family 3 PB01_RS12710 PF17392 Urocanase C-terminal domain PB01_RS12710 PF17391 Urocanase N-terminal domain PB01_RS12710 PF01175 Urocanase Rossmann-like domain PB01_RS12715 PF02954 Bacterial regulatory protein, Fis family PB01_RS12715 PF00158 Sigma-54 interaction domain PB01_RS12715 PF13426 PAS domain PB01_RS12720 PF01175 Urocanase Rossmann-like domain PB01_RS12720 PF17391 Urocanase N-terminal domain PB01_RS12720 PF17392 Urocanase C-terminal domain PB01_RS12730 PF03060 Nitronate monooxygenase PB01_RS12740 PF04229 GrpB protein PB01_RS12740 PF13673 Acetyltransferase (GNAT) domain PB01_RS12760 PF03484 tRNA synthetase B5 domain PB01_RS12760 PF03483 B3/4 domain PB01_RS12760 PF03147 Ferredoxin-fold anticodon binding domain PB01_RS12760 PF01588 Putative tRNA binding domain PB01_RS12760 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PB01_RS12765 PF01409 tRNA synthetases class II core domain (F) PB01_RS12765 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PB01_RS12770 PF00588 SpoU rRNA Methylase family PB01_RS12770 PF08032 RNA 2'-O ribose methyltransferase substrate binding PB01_RS12775 PF14098 Small, acid-soluble spore protein I PB01_RS12785 PF01381 Helix-turn-helix PB01_RS12790 PF01565 FAD binding domain PB01_RS12790 PF02913 FAD linked oxidases, C-terminal domain PB01_RS12795 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PB01_RS12795 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PB01_RS12800 PF05343 M42 glutamyl aminopeptidase PB01_RS12820 PF00453 Ribosomal protein L20 PB01_RS12825 PF01632 Ribosomal protein L35 PB01_RS12830 PF00707 Translation initiation factor IF-3, C-terminal domain PB01_RS12830 PF05198 Translation initiation factor IF-3, N-terminal domain PB01_RS12835 PF03129 Anticodon binding domain PB01_RS12835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PB01_RS12835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PB01_RS12835 PF02824 TGS domain PB01_RS12840 PF07319 Primosomal protein DnaI N-terminus PB01_RS12840 PF01695 IstB-like ATP binding protein PB01_RS12845 PF07261 Replication initiation and membrane attachment PB01_RS12850 PF03477 ATP cone domain PB01_RS12855 PF02675 S-adenosylmethionine decarboxylase PB01_RS12860 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PB01_RS12860 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PB01_RS12865 PF01121 Dephospho-CoA kinase PB01_RS12870 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PB01_RS12870 PF06827 Zinc finger found in FPG and IleRS PB01_RS12870 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PB01_RS12875 PF01367 5'-3' exonuclease, C-terminal SAM fold PB01_RS12875 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PB01_RS12875 PF00476 DNA polymerase family A PB01_RS12880 PF01145 SPFH domain / Band 7 family PB01_RS12885 PF01145 SPFH domain / Band 7 family PB01_RS12895 PF16736 Single Cache-like PB01_RS12895 PF00989 PAS fold PB01_RS12895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS12895 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS12900 PF00486 Transcriptional regulatory protein, C terminal PB01_RS12900 PF00072 Response regulator receiver domain PB01_RS12910 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PB01_RS12910 PF00056 lactate/malate dehydrogenase, NAD binding domain PB01_RS12915 PF00180 Isocitrate/isopropylmalate dehydrogenase PB01_RS12920 PF00285 Citrate synthase, C-terminal domain PB01_RS12925 PF01594 AI-2E family transporter PB01_RS12930 PF04186 FxsA cytoplasmic membrane protein PB01_RS12935 PF00391 PEP-utilising enzyme, mobile domain PB01_RS12935 PF02887 Pyruvate kinase, alpha/beta domain PB01_RS12935 PF00224 Pyruvate kinase, barrel domain PB01_RS12940 PF00365 Phosphofructokinase PB01_RS12945 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PB01_RS12950 PF17848 Acetyl-coA carboxylase zinc finger domain PB01_RS12950 PF01039 Carboxyl transferase domain PB01_RS12955 PF00392 Bacterial regulatory proteins, gntR family PB01_RS12960 PF02811 PHP domain PB01_RS12960 PF01336 OB-fold nucleic acid binding domain PB01_RS12960 PF07733 Bacterial DNA polymerase III alpha NTPase domain PB01_RS12960 PF14579 Helix-hairpin-helix motif PB01_RS12960 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PB01_RS12965 PF02272 DHHA1 domain PB01_RS12965 PF01368 DHH family PB01_RS12975 PF03061 Thioesterase superfamily PB01_RS12975 PF00571 CBS domain PB01_RS12975 PF00392 Bacterial regulatory proteins, gntR family PB01_RS12975 PF07085 DRTGG domain PB01_RS12985 PF00557 Metallopeptidase family M24 PB01_RS12985 PF01321 Creatinase/Prolidase N-terminal domain PB01_RS12990 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PB01_RS12995 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PB01_RS13000 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PB01_RS13000 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PB01_RS13005 PF00582 Universal stress protein family PB01_RS13015 PF01609 Transposase DDE domain PB01_RS13020 PF00871 Acetokinase family PB01_RS13025 PF02384 N-6 DNA Methylase PB01_RS13030 PF08534 Redoxin PB01_RS13035 PF06271 RDD family PB01_RS13040 PF01343 Peptidase family S49 PB01_RS13045 PF01513 ATP-NAD kinase PB01_RS13050 PF00892 EamA-like transporter family PB01_RS13055 PF13193 AMP-binding enzyme C-terminal domain PB01_RS13055 PF00501 AMP-binding enzyme PB01_RS13060 PF00269 Small, acid-soluble spore proteins, alpha/beta type PB01_RS13065 PF02568 Thiamine biosynthesis protein (ThiI) PB01_RS13065 PF02926 THUMP domain PB01_RS13070 PF00266 Aminotransferase class-V PB01_RS13075 PF06160 Septation ring formation regulator, EzrA PB01_RS13080 PF02811 PHP domain PB01_RS13085 PF13185 GAF domain PB01_RS13090 PF01645 Conserved region in glutamate synthase PB01_RS13095 PF01053 Cys/Met metabolism PLP-dependent enzyme PB01_RS13100 PF00990 Diguanylate cyclase, GGDEF domain PB01_RS13105 PF00163 Ribosomal protein S4/S9 N-terminal domain PB01_RS13105 PF01479 S4 domain PB01_RS13115 PF00579 tRNA synthetases class I (W and Y) PB01_RS13115 PF01479 S4 domain PB01_RS13120 PF00905 Penicillin binding protein transpeptidase domain PB01_RS13120 PF00912 Transglycosylase PB01_RS13125 PF13193 AMP-binding enzyme C-terminal domain PB01_RS13125 PF00501 AMP-binding enzyme PB01_RS13130 PF00583 Acetyltransferase (GNAT) family PB01_RS13135 PF00571 CBS domain PB01_RS13140 PF00850 Histone deacetylase domain PB01_RS13145 PF00356 Bacterial regulatory proteins, lacI family PB01_RS13150 PF00793 DAHP synthetase I family PB01_RS13150 PF01817 Chorismate mutase type II PB01_RS13155 PF02491 SHS2 domain inserted in FTSA PB01_RS13160 PF12732 YtxH-like protein PB01_RS13165 PF06103 Bacterial protein of unknown function (DUF948) PB01_RS13170 PF01225 Mur ligase family, catalytic domain PB01_RS13170 PF08245 Mur ligase middle domain PB01_RS13170 PF02875 Mur ligase family, glutamate ligase domain PB01_RS13175 PF09397 Ftsk gamma domain PB01_RS13175 PF17854 FtsK alpha domain PB01_RS13175 PF01580 FtsK/SpoIIIE family PB01_RS13180 PF14794 Domain of unknown function (DUF4479) PB01_RS13180 PF01588 Putative tRNA binding domain PB01_RS13185 PF07285 Protein of unknown function (DUF1444) PB01_RS13190 PF00085 Thioredoxin PB01_RS13200 PF01931 Protein of unknown function DUF84 PB01_RS13205 PF05343 M42 glutamyl aminopeptidase PB01_RS13210 PF03413 Peptidase propeptide and YPEB domain PB01_RS13215 PF00753 Metallo-beta-lactamase superfamily PB01_RS13220 PF02390 Putative methyltransferase PB01_RS13225 PF00781 Diacylglycerol kinase catalytic domain PB01_RS13240 PF01063 Amino-transferase class IV PB01_RS13245 PF01546 Peptidase family M20/M25/M40 PB01_RS13255 PF08220 DeoR-like helix-turn-helix domain PB01_RS13260 PF00849 RNA pseudouridylate synthase PB01_RS13260 PF01479 S4 domain PB01_RS13265 PF14667 Polysaccharide biosynthesis C-terminal domain PB01_RS13265 PF01943 Polysaccharide biosynthesis protein PB01_RS13290 PF08818 Domain of unknown function (DU1801) PB01_RS13300 PF08264 Anticodon-binding domain of tRNA PB01_RS13300 PF09334 tRNA synthetases class I (M) PB01_RS13300 PF13603 Leucyl-tRNA synthetase, Domain 2 PB01_RS13300 PF00133 tRNA synthetases class I (I, L, M and V) PB01_RS13305 PF01144 Coenzyme A transferase PB01_RS13310 PF01144 Coenzyme A transferase PB01_RS13315 PF07690 Major Facilitator Superfamily PB01_RS13320 PF04055 Radical SAM superfamily PB01_RS13320 PF16199 Radical_SAM C-terminal domain PB01_RS13325 PF06962 Putative rRNA methylase PB01_RS13330 PF02797 Chalcone and stilbene synthases, C-terminal domain PB01_RS13330 PF00195 Chalcone and stilbene synthases, N-terminal domain PB01_RS13335 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PB01_RS13340 PF03949 Malic enzyme, NAD binding domain PB01_RS13340 PF00390 Malic enzyme, N-terminal domain PB01_RS13340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PB01_RS13345 PF12146 Serine aminopeptidase, S33 PB01_RS13350 PF00132 Bacterial transferase hexapeptide (six repeats) PB01_RS13355 PF02773 S-adenosylmethionine synthetase, C-terminal domain PB01_RS13355 PF02772 S-adenosylmethionine synthetase, central domain PB01_RS13355 PF00438 S-adenosylmethionine synthetase, N-terminal domain PB01_RS13360 PF01293 Phosphoenolpyruvate carboxykinase PB01_RS13370 PF00326 Prolyl oligopeptidase family PB01_RS13375 PF00293 NUDIX domain PB01_RS13400 PF00210 Ferritin-like domain PB01_RS13405 PF01809 Putative membrane protein insertion efficiency factor PB01_RS13410 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment PB01_RS13410 PF01297 Zinc-uptake complex component A periplasmic PB01_RS13415 PF00501 AMP-binding enzyme PB01_RS13415 PF13193 AMP-binding enzyme C-terminal domain PB01_RS13420 PF00378 Enoyl-CoA hydratase/isomerase PB01_RS13425 PF00561 alpha/beta hydrolase fold PB01_RS13430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PB01_RS13430 PF16582 Middle domain of thiamine pyrophosphate PB01_RS13430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PB01_RS13435 PF00425 chorismate binding enzyme PB01_RS13440 PF01040 UbiA prenyltransferase family PB01_RS13560 PF02308 MgtC family PB01_RS13570 PF00465 Iron-containing alcohol dehydrogenase PB01_RS13575 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PB01_RS13575 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PB01_RS13580 PF00202 Aminotransferase class-III PB01_RS13585 PF00171 Aldehyde dehydrogenase family PB01_RS13590 PF02954 Bacterial regulatory protein, Fis family PB01_RS13590 PF13426 PAS domain PB01_RS13590 PF00158 Sigma-54 interaction domain PB01_RS13595 PF00575 S1 RNA binding domain PB01_RS13605 PF08281 Sigma-70, region 4 PB01_RS13605 PF04542 Sigma-70 region 2 PB01_RS13610 PF00209 Sodium:neurotransmitter symporter family PB01_RS13625 PF00155 Aminotransferase class I and II PB01_RS13635 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PB01_RS13640 PF07690 Major Facilitator Superfamily PB01_RS13645 PF00905 Penicillin binding protein transpeptidase domain PB01_RS13645 PF00912 Transglycosylase PB01_RS13650 PF07690 Major Facilitator Superfamily PB01_RS13655 PF00440 Bacterial regulatory proteins, tetR family PB01_RS13660 PF17328 Family of unknown function (DUF5366) PB01_RS13665 PF00361 Proton-conducting membrane transporter PB01_RS13665 PF13244 Domain of unknown function (DUF4040) PB01_RS13665 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PB01_RS13670 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter PB01_RS13675 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PB01_RS13680 PF00361 Proton-conducting membrane transporter PB01_RS13685 PF01899 Na+/H+ ion antiporter subunit PB01_RS13690 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) PB01_RS13695 PF03334 Na+/H+ antiporter subunit PB01_RS13705 PF02789 Cytosol aminopeptidase family, N-terminal domain PB01_RS13705 PF00883 Cytosol aminopeptidase family, catalytic domain PB01_RS13710 PF02681 Divergent PAP2 family PB01_RS13715 PF14068 Putative membrane protein PB01_RS13720 PF00293 NUDIX domain PB01_RS13720 PF13344 Haloacid dehalogenase-like hydrolase PB01_RS13725 PF07992 Pyridine nucleotide-disulphide oxidoreductase PB01_RS13730 PF01521 Iron-sulphur cluster biosynthesis PB01_RS13740 PF01106 NifU-like domain PB01_RS13745 PF07315 Protein of unknown function (DUF1462) PB01_RS13750 PF07992 Pyridine nucleotide-disulphide oxidoreductase PB01_RS13755 PF07293 Protein of unknown function (DUF1450) PB01_RS13760 PF13344 Haloacid dehalogenase-like hydrolase PB01_RS13765 PF01934 Protein of unknown function DUF86 PB01_RS13775 PF06265 Protein of unknown function (DUF1027) PB01_RS13780 PF04055 Radical SAM superfamily PB01_RS13780 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family PB01_RS13785 PF09560 Sporulation protein YunB (Spo_YunB) PB01_RS13790 PF02872 5'-nucleotidase, C-terminal domain PB01_RS13795 PF01925 Sulfite exporter TauE/SafE PB01_RS13800 PF01904 Protein of unknown function DUF72 PB01_RS13805 PF01458 Uncharacterized protein family (UPF0051) PB01_RS13810 PF01592 NifU-like N terminal domain PB01_RS13815 PF00266 Aminotransferase class-V PB01_RS13820 PF01458 Uncharacterized protein family (UPF0051) PB01_RS13825 PF00005 ABC transporter PB01_RS13835 PF03180 NLPA lipoprotein PB01_RS13840 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS13845 PF09383 NIL domain PB01_RS13845 PF00005 ABC transporter PB01_RS13850 PF00085 Thioredoxin PB01_RS13855 PF01751 Toprim domain PB01_RS13865 PF01597 Glycine cleavage H-protein PB01_RS13870 PF03960 ArsC family PB01_RS13875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PB01_RS13875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PB01_RS13875 PF02770 Acyl-CoA dehydrogenase, middle domain PB01_RS13880 PF02803 Thiolase, C-terminal domain PB01_RS13880 PF00108 Thiolase, N-terminal domain PB01_RS13885 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PB01_RS13885 PF00378 Enoyl-CoA hydratase/isomerase PB01_RS13885 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PB01_RS13890 PF00085 Thioredoxin PB01_RS13910 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PB01_RS13910 PF01367 5'-3' exonuclease, C-terminal SAM fold PB01_RS13915 PF01266 FAD dependent oxidoreductase PB01_RS13915 PF04324 BFD-like [2Fe-2S] binding domain PB01_RS13920 PF00483 Nucleotidyl transferase PB01_RS13970 PF01501 Glycosyl transferase family 8 PB01_RS13970 PF00535 Glycosyl transferase family 2 PB01_RS13975 PF00535 Glycosyl transferase family 2 PB01_RS13985 PF12918 TcdB toxin N-terminal helical domain PB01_RS13985 PF01473 Putative cell wall binding repeat PB01_RS13985 PF11713 Peptidase C80 family PB01_RS13985 PF12919 TcdA/TcdB catalytic glycosyltransferase domain PB01_RS13985 PF12920 TcdA/TcdB pore forming domain PB01_RS13990 PF00535 Glycosyl transferase family 2 PB01_RS14000 PF16363 GDP-mannose 4,6 dehydratase PB01_RS14005 PF16363 GDP-mannose 4,6 dehydratase PB01_RS14010 PF00483 Nucleotidyl transferase PB01_RS14020 PF13614 AAA domain PB01_RS14025 PF02706 Chain length determinant protein PB01_RS14025 PF13807 G-rich domain on putative tyrosine kinase PB01_RS14035 PF02397 Bacterial sugar transferase PB01_RS14045 PF08281 Sigma-70, region 4 PB01_RS14045 PF04542 Sigma-70 region 2 PB01_RS14070 PF04960 Glutaminase PB01_RS14075 PF02308 MgtC family PB01_RS14085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PB01_RS14100 PF01636 Phosphotransferase enzyme family PB01_RS14105 PF03992 Antibiotic biosynthesis monooxygenase PB01_RS14110 PF00873 AcrB/AcrD/AcrF family PB01_RS14135 PF03606 C4-dicarboxylate anaerobic carrier PB01_RS14140 PF01546 Peptidase family M20/M25/M40 PB01_RS14140 PF07687 Peptidase dimerisation domain PB01_RS14170 PF03551 Transcriptional regulator PadR-like family PB01_RS14170 PF13847 Methyltransferase domain PB01_RS14175 PF13538 UvrD-like helicase C-terminal domain PB01_RS14200 PF13426 PAS domain PB01_RS14200 PF00672 HAMP domain PB01_RS14200 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS14200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS14215 PF07690 Major Facilitator Superfamily PB01_RS14220 PF00884 Sulfatase PB01_RS14250 PF00665 Integrase core domain PB01_RS14250 PF09299 Mu transposase, C-terminal PB01_RS14270 PF00580 UvrD/REP helicase N-terminal domain PB01_RS14270 PF13361 UvrD-like helicase C-terminal domain PB01_RS14295 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) PB01_RS14295 PF01348 Type II intron maturase PB01_RS14300 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) PB01_RS14370 PF01636 Phosphotransferase enzyme family PB01_RS14390 PF01668 SmpB protein PB01_RS14395 PF17876 Cold shock domain PB01_RS14395 PF00575 S1 RNA binding domain PB01_RS14395 PF08206 Ribonuclease B OB domain PB01_RS14395 PF00773 RNB domain PB01_RS14400 PF12146 Serine aminopeptidase, S33 PB01_RS14405 PF03840 Preprotein translocase SecG subunit PB01_RS14415 PF03952 Enolase, N-terminal domain PB01_RS14415 PF00113 Enolase, C-terminal TIM barrel domain PB01_RS14450 PF13673 Acetyltransferase (GNAT) domain PB01_RS14450 PF18014 Acetyltransferase (GNAT) domain PB01_RS14485 PF03952 Enolase, N-terminal domain PB01_RS14485 PF00113 Enolase, C-terminal TIM barrel domain PB01_RS14490 PF01676 Metalloenzyme superfamily PB01_RS14490 PF06415 BPG-independent PGAM N-terminus (iPGM_N) PB01_RS14495 PF00121 Triosephosphate isomerase PB01_RS14500 PF00162 Phosphoglycerate kinase PB01_RS14505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PB01_RS14505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PB01_RS14510 PF04198 Putative sugar-binding domain PB01_RS14530 PF00583 Acetyltransferase (GNAT) family PB01_RS14540 PF04011 LemA family PB01_RS14545 PF00199 Catalase PB01_RS14545 PF06628 Catalase-related immune-responsive PB01_RS14555 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS14555 PF00672 HAMP domain PB01_RS14555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS14560 PF00486 Transcriptional regulatory protein, C terminal PB01_RS14560 PF00072 Response regulator receiver domain PB01_RS14565 PF10518 TAT (twin-arginine translocation) pathway signal sequence PB01_RS14565 PF00149 Calcineurin-like phosphoesterase PB01_RS14575 PF00574 Clp protease PB01_RS14580 PF00381 PTS HPr component phosphorylation site PB01_RS14585 PF14527 WhiA LAGLIDADG-like domain PB01_RS14585 PF02650 WhiA C-terminal HTH domain PB01_RS14585 PF10298 WhiA N-terminal LAGLIDADG-like domain PB01_RS14590 PF01933 Uncharacterised protein family UPF0052 PB01_RS14595 PF03668 P-loop ATPase protein family PB01_RS14600 PF00293 NUDIX domain PB01_RS14605 PF07992 Pyridine nucleotide-disulphide oxidoreductase PB01_RS14615 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase PB01_RS14615 PF01502 Phosphoribosyl-AMP cyclohydrolase PB01_RS14620 PF00977 Histidine biosynthesis protein PB01_RS14625 PF00475 Imidazoleglycerol-phosphate dehydratase PB01_RS14630 PF00815 Histidinol dehydrogenase PB01_RS14635 PF01634 ATP phosphoribosyltransferase PB01_RS14640 PF13393 Histidyl-tRNA synthetase PB01_RS14645 PF14602 Hexapeptide repeat of succinyl-transferase PB01_RS14650 PF13419 Haloacid dehalogenase-like hydrolase PB01_RS14655 PF07670 Nucleoside recognition PB01_RS14660 PF01790 Prolipoprotein diacylglyceryl transferase PB01_RS14665 PF07475 HPr Serine kinase C-terminal domain PB01_RS14665 PF02603 HPr Serine kinase N terminus PB01_RS14670 PF01520 N-acetylmuramoyl-L-alanine amidase PB01_RS14670 PF05036 Sporulation related domain PB01_RS14675 PF13349 Putative adhesin PB01_RS14680 PF17760 UvrA interaction domain PB01_RS14680 PF00005 ABC transporter PB01_RS14680 PF17755 UvrA DNA-binding domain PB01_RS14685 PF12344 Ultra-violet resistance protein B PB01_RS14685 PF02151 UvrB/uvrC motif PB01_RS14685 PF17757 UvrB interaction domain PB01_RS14685 PF00271 Helicase conserved C-terminal domain PB01_RS14685 PF04851 Type III restriction enzyme, res subunit PB01_RS14705 PF08668 HDOD domain PB01_RS14705 PF00563 EAL domain PB01_RS14710 PF00378 Enoyl-CoA hydratase/isomerase PB01_RS14715 PF01565 FAD binding domain PB01_RS14720 PF07690 Major Facilitator Superfamily PB01_RS14735 PF00300 Histidine phosphatase superfamily (branch 1) PB01_RS14765 PF14158 YndJ-like protein PB01_RS14800 PF01588 Putative tRNA binding domain PB01_RS14825 PF13649 Methyltransferase domain PB01_RS14835 PF13847 Methyltransferase domain PB01_RS14840 PF01425 Amidase PB01_RS14850 PF04070 Domain of unknown function (DUF378) PB01_RS14890 PF00005 ABC transporter PB01_RS14895 PF02687 FtsX-like permease family PB01_RS14905 PF00892 EamA-like transporter family PB01_RS14910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PB01_RS14910 PF03466 LysR substrate binding domain PB01_RS14920 PF04542 Sigma-70 region 2 PB01_RS14920 PF08281 Sigma-70, region 4 PB01_RS14965 PF08241 Methyltransferase domain PB01_RS14970 PF10026 Predicted Zn-dependent protease (DUF2268) PB01_RS15000 PF01053 Cys/Met metabolism PLP-dependent enzyme PB01_RS15005 PF00291 Pyridoxal-phosphate dependent enzyme PB01_RS15010 PF02664 S-Ribosylhomocysteinase (LuxS) PB01_RS15015 PF13649 Methyltransferase domain PB01_RS15035 PF17676 LD-carboxypeptidase C-terminal domain PB01_RS15035 PF02016 LD-carboxypeptidase N-terminal domain PB01_RS15050 PF03649 Uncharacterised protein family (UPF0014) PB01_RS15055 PF00005 ABC transporter PB01_RS15065 PF00324 Amino acid permease PB01_RS15070 PF07676 WD40-like Beta Propeller Repeat PB01_RS15070 PF00326 Prolyl oligopeptidase family PB01_RS15075 PF00501 AMP-binding enzyme PB01_RS15075 PF13193 AMP-binding enzyme C-terminal domain PB01_RS15080 PF02687 FtsX-like permease family PB01_RS15085 PF00005 ABC transporter PB01_RS15090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS15095 PF00072 Response regulator receiver domain PB01_RS15095 PF00486 Transcriptional regulatory protein, C terminal PB01_RS15100 PF10437 Bacterial lipoate protein ligase C-terminus PB01_RS15100 PF03099 Biotin/lipoate A/B protein ligase family PB01_RS15105 PF14149 YhfH-like protein PB01_RS15110 PF00455 DeoR C terminal sensor domain PB01_RS15110 PF08220 DeoR-like helix-turn-helix domain PB01_RS15115 PF00296 Luciferase-like monooxygenase PB01_RS15180 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) PB01_RS15180 PF01348 Type II intron maturase PB01_RS15185 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) PB01_RS15195 PF13302 Acetyltransferase (GNAT) domain PB01_RS15200 PF02660 Glycerol-3-phosphate acyltransferase PB01_RS15250 PF17932 Tetracyclin repressor-like, C-terminal domain PB01_RS15250 PF00440 Bacterial regulatory proteins, tetR family PB01_RS15260 PF16736 Single Cache-like PB01_RS15260 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS15260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS15260 PF00989 PAS fold PB01_RS15265 PF00072 Response regulator receiver domain PB01_RS15265 PF00486 Transcriptional regulatory protein, C terminal PB01_RS15280 PF00762 Ferrochelatase PB01_RS15285 PF01208 Uroporphyrinogen decarboxylase (URO-D) PB01_RS15290 PF03992 Antibiotic biosynthesis monooxygenase PB01_RS15295 PF07687 Peptidase dimerisation domain PB01_RS15295 PF01546 Peptidase family M20/M25/M40 PB01_RS15300 PF05975 Bacterial ABC transporter protein EcsB PB01_RS15305 PF00005 ABC transporter PB01_RS15310 PF01230 HIT domain PB01_RS15315 PF17099 Tryptophan transporter TrpP PB01_RS15325 PF01047 MarR family PB01_RS15345 PF05698 Bacterial trigger factor protein (TF) C-terminus PB01_RS15355 PF01966 HD domain PB01_RS15360 PF13514 AAA domain PB01_RS15365 PF00149 Calcineurin-like phosphoesterase PB01_RS15390 PF13800 Sigma factor regulator N-terminal PB01_RS15390 PF13791 Sigma factor regulator C-terminal PB01_RS15400 PF00378 Enoyl-CoA hydratase/isomerase PB01_RS15405 PF06133 Control of competence regulator ComK, YlbF/YmcA PB01_RS15410 PF04286 Protein of unknown function (DUF445) PB01_RS15425 PF07690 Major Facilitator Superfamily PB01_RS15440 PF01381 Helix-turn-helix PB01_RS15445 PF00005 ABC transporter PB01_RS15445 PF00664 ABC transporter transmembrane region PB01_RS15450 PF00664 ABC transporter transmembrane region PB01_RS15450 PF00005 ABC transporter PB01_RS15455 PF01595 Cyclin M transmembrane N-terminal domain PB01_RS15455 PF03471 Transporter associated domain PB01_RS15455 PF00571 CBS domain PB01_RS15460 PF00196 Bacterial regulatory proteins, luxR family PB01_RS15460 PF00072 Response regulator receiver domain PB01_RS15465 PF07730 Histidine kinase PB01_RS15465 PF13185 GAF domain PB01_RS15470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PB01_RS15470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PB01_RS15470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PB01_RS15470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PB01_RS15475 PF00795 Carbon-nitrogen hydrolase PB01_RS15475 PF00583 Acetyltransferase (GNAT) family PB01_RS15480 PF02600 Disulfide bond formation protein DsbB PB01_RS15485 PF00085 Thioredoxin PB01_RS15490 PF01479 S4 domain PB01_RS15490 PF00849 RNA pseudouridylate synthase PB01_RS15515 PF00293 NUDIX domain PB01_RS15535 PF00248 Aldo/keto reductase family PB01_RS15545 PF00588 SpoU rRNA Methylase family PB01_RS15550 PF08331 Domain of unknown function (DUF1730) PB01_RS15565 PF08281 Sigma-70, region 4 PB01_RS15565 PF04542 Sigma-70 region 2 PB01_RS15570 PF03129 Anticodon binding domain PB01_RS15570 PF09180 Prolyl-tRNA synthetase, C-terminal PB01_RS15570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PB01_RS15680 PF18576 Helix-turn-helix domain PB01_RS15680 PF14540 Nucleotidyltransferase-like PB01_RS15685 PF11023 Zinc-ribbon containing domain PB01_RS15690 PF01475 Ferric uptake regulator family PB01_RS15695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PB01_RS15700 PF00578 AhpC/TSA family PB01_RS15705 PF00202 Aminotransferase class-III PB01_RS15710 PF06081 Aromatic acid exporter family member 1 PB01_RS15725 PF12911 N-terminal TM domain of oligopeptide transport permease C PB01_RS15725 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS15730 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS15735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PB01_RS15740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PB01_RS15740 PF00005 ABC transporter PB01_RS15745 PF00005 ABC transporter PB01_RS15745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PB01_RS15750 PF00664 ABC transporter transmembrane region PB01_RS15750 PF00005 ABC transporter PB01_RS15755 PF04167 Protein of unknown function (DUF402) PB01_RS15770 PF00730 HhH-GPD superfamily base excision DNA repair protein PB01_RS15770 PF14815 NUDIX domain PB01_RS15775 PF04307 LexA-binding, inner membrane-associated putative hydrolase PB01_RS15780 PF14043 WVELL protein PB01_RS15785 PF08838 Protein of unknown function (DUF1811) PB01_RS15790 PF02631 RecX family PB01_RS15795 PF08338 Domain of unknown function (DUF1731) PB01_RS15795 PF01370 NAD dependent epimerase/dehydratase family PB01_RS15800 PF01522 Polysaccharide deacetylase PB01_RS15805 PF05958 tRNA (Uracil-5-)-methyltransferase PB01_RS15805 PF01938 TRAM domain PB01_RS15830 PF00144 Beta-lactamase PB01_RS15835 PF01370 NAD dependent epimerase/dehydratase family PB01_RS15840 PF04892 VanZ like family PB01_RS15860 PF07690 Major Facilitator Superfamily PB01_RS15870 PF05681 Fumarate hydratase (Fumerase) PB01_RS15870 PF05683 Fumarase C-terminus PB01_RS15880 PF13419 Haloacid dehalogenase-like hydrolase PB01_RS15890 PF00144 Beta-lactamase PB01_RS15900 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) PB01_RS15905 PF03631 Virulence factor BrkB PB01_RS15915 PF01235 Sodium:alanine symporter family PB01_RS15920 PF06569 Protein of unknown function (DUF1128) PB01_RS15925 PF04227 Indigoidine synthase A like protein PB01_RS15935 PF13677 Membrane MotB of proton-channel complex MotA/MotB PB01_RS15935 PF00691 OmpA family PB01_RS15940 PF01618 MotA/TolQ/ExbB proton channel family PB01_RS15945 PF02073 Thermophilic metalloprotease (M29) PB01_RS15950 PF02073 Thermophilic metalloprotease (M29) PB01_RS15960 PF00484 Carbonic anhydrase PB01_RS15970 PF08439 Oligopeptidase F PB01_RS15970 PF01432 Peptidase family M3 PB01_RS15980 PF00557 Metallopeptidase family M24 PB01_RS15985 PF09515 Thiamine transporter protein (Thia_YuaJ) PB01_RS15990 PF01546 Peptidase family M20/M25/M40 PB01_RS15990 PF07687 Peptidase dimerisation domain PB01_RS16005 PF02073 Thermophilic metalloprotease (M29) PB01_RS16010 PF00270 DEAD/DEAH box helicase PB01_RS16010 PF00271 Helicase conserved C-terminal domain PB01_RS16035 PF13419 Haloacid dehalogenase-like hydrolase PB01_RS16040 PF01842 ACT domain PB01_RS16040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PB01_RS16040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PB01_RS16045 PF00696 Amino acid kinase family PB01_RS16045 PF13840 ACT domain PB01_RS16050 PF00293 NUDIX domain PB01_RS16055 PF07690 Major Facilitator Superfamily PB01_RS16060 PF00860 Permease family PB01_RS16065 PF00156 Phosphoribosyl transferase domain PB01_RS16075 PF08447 PAS fold PB01_RS16075 PF13426 PAS domain PB01_RS16075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PB01_RS16080 PF01266 FAD dependent oxidoreductase PB01_RS16085 PF02016 LD-carboxypeptidase N-terminal domain PB01_RS16085 PF17676 LD-carboxypeptidase C-terminal domain PB01_RS16090 PF00072 Response regulator receiver domain PB01_RS16090 PF00486 Transcriptional regulatory protein, C terminal PB01_RS16100 PF00535 Glycosyl transferase family 2 PB01_RS16110 PF07501 G5 domain PB01_RS16110 PF06725 3D domain PB01_RS16110 PF03990 G5-linked-Ubiquitin-like domain PB01_RS16115 PF00672 HAMP domain PB01_RS16115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PB01_RS16115 PF02743 Cache domain PB01_RS16135 PF01522 Polysaccharide deacetylase PB01_RS16150 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PB01_RS16155 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS16160 PF00571 CBS domain PB01_RS16160 PF00005 ABC transporter PB01_RS16165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PB01_RS16180 PF07561 Domain of Unknown Function (DUF1540) PB01_RS16195 PF04073 Aminoacyl-tRNA editing domain PB01_RS16205 PF09529 Integral membrane protein (intg_mem_TP0381) PB01_RS16215 PF01546 Peptidase family M20/M25/M40 PB01_RS16215 PF07687 Peptidase dimerisation domain PB01_RS16220 PF00535 Glycosyl transferase family 2 PB01_RS16240 PF07308 Protein of unknown function (DUF1456) PB01_RS16245 PF01546 Peptidase family M20/M25/M40 PB01_RS16250 PF07690 Major Facilitator Superfamily PB01_RS16260 PF13520 Amino acid permease PB01_RS16265 PF00857 Isochorismatase family PB01_RS16270 PF00375 Sodium:dicarboxylate symporter family PB01_RS16285 PF05958 tRNA (Uracil-5-)-methyltransferase PB01_RS16285 PF01938 TRAM domain PB01_RS16290 PF04607 Region found in RelA / SpoT proteins PB01_RS16295 PF13419 Haloacid dehalogenase-like hydrolase PB01_RS16300 PF02322 Cytochrome bd terminal oxidase subunit II PB01_RS16305 PF01654 Cytochrome bd terminal oxidase subunit I PB01_RS16310 PF00781 Diacylglycerol kinase catalytic domain PB01_RS16320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PB01_RS16325 PF02934 GatB/GatE catalytic domain PB01_RS16325 PF02637 GatB domain PB01_RS16330 PF01425 Amidase PB01_RS16335 PF02686 Glu-tRNAGln amidotransferase C subunit PB01_RS16340 PF07537 CamS sex pheromone cAM373 precursor PB01_RS16345 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PB01_RS16345 PF01653 NAD-dependent DNA ligase adenylation domain PB01_RS16345 PF03120 NAD-dependent DNA ligase OB-fold domain PB01_RS16345 PF00533 BRCA1 C Terminus (BRCT) domain PB01_RS16345 PF12826 Helix-hairpin-helix motif PB01_RS16350 PF13361 UvrD-like helicase C-terminal domain PB01_RS16350 PF00580 UvrD/REP helicase N-terminal domain PB01_RS16355 PF01884 PcrB family PB01_RS16360 PF01371 Trp repressor protein PB01_RS16365 PF11258 Protein of unknown function (DUF3048) N-terminal domain PB01_RS16365 PF17479 Protein of unknown function (DUF3048) C-terminal domain PB01_RS16370 PF13382 Adenine deaminase C-terminal domain PB01_RS16370 PF01979 Amidohydrolase family PB01_RS16375 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PB01_RS16375 PF02843 Phosphoribosylglycinamide synthetase, C domain PB01_RS16375 PF02844 Phosphoribosylglycinamide synthetase, N domain PB01_RS16380 PF02142 MGS-like domain PB01_RS16380 PF01808 AICARFT/IMPCHase bienzyme PB01_RS16385 PF00551 Formyl transferase PB01_RS16390 PF00586 AIR synthase related protein, N-terminal domain PB01_RS16390 PF02769 AIR synthase related protein, C-terminal domain PB01_RS16395 PF00156 Phosphoribosyl transferase domain PB01_RS16400 PF00586 AIR synthase related protein, N-terminal domain PB01_RS16400 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PB01_RS16400 PF02769 AIR synthase related protein, C-terminal domain PB01_RS16410 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase PB01_RS16415 PF01259 SAICAR synthetase PB01_RS16420 PF10397 Adenylosuccinate lyase C-terminus PB01_RS16420 PF00206 Lyase PB01_RS16425 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain PB01_RS16425 PF02222 ATP-grasp domain PB01_RS16430 PF00731 AIR carboxylase PB01_RS16440 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PB01_RS16460 PF00860 Permease family PB01_RS16465 PF02540 NAD synthase PB01_RS16465 PF00958 GMP synthase C terminal domain PB01_RS16465 PF00117 Glutamine amidotransferase class-I PB01_RS16470 PF13559 Domain of unknown function (DUF4129) PB01_RS16470 PF11992 Domain of unknown function (DUF3488) PB01_RS16470 PF01841 Transglutaminase-like superfamily PB01_RS16475 PF01882 Protein of unknown function DUF58 PB01_RS16480 PF17863 AAA lid domain PB01_RS16480 PF07726 ATPase family associated with various cellular activities (AAA) PB01_RS16485 PF02540 NAD synthase PB01_RS16490 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PB01_RS16490 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain PB01_RS16490 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PB01_RS16495 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PB01_RS16495 PF13360 PQQ-like domain PB01_RS16505 PF03372 Endonuclease/Exonuclease/phosphatase family PB01_RS16510 PF06628 Catalase-related immune-responsive PB01_RS16510 PF00199 Catalase PB01_RS16520 PF01546 Peptidase family M20/M25/M40 PB01_RS16520 PF07687 Peptidase dimerisation domain PB01_RS16525 PF00135 Carboxylesterase family PB01_RS16540 PF01872 RibD C-terminal domain PB01_RS16570 PF00313 'Cold-shock' DNA-binding domain PB01_RS16595 PF13508 Acetyltransferase (GNAT) domain PB01_RS16595 PF00583 Acetyltransferase (GNAT) family PB01_RS16620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PB01_RS16630 PF00696 Amino acid kinase family PB01_RS16640 PF06545 Protein of unknown function (DUF1116) PB01_RS16645 PF02629 CoA binding domain PB01_RS16645 PF00549 CoA-ligase PB01_RS16655 PF07905 Purine catabolism regulatory protein-like family PB01_RS16655 PF13556 PucR C-terminal helix-turn-helix domain PB01_RS16655 PF17853 GGDEF-like domain PB01_RS16660 PF05675 Protein of unknown function (DUF817) PB01_RS16670 PF01593 Flavin containing amine oxidoreductase PB01_RS16680 PF04199 Putative cyclase PB01_RS16685 PF03301 Tryptophan 2,3-dioxygenase PB01_RS16690 PF00266 Aminotransferase class-V PB01_RS16710 PF13181 Tetratricopeptide repeat PB01_RS16710 PF00535 Glycosyl transferase family 2 PB01_RS16725 PF13181 Tetratricopeptide repeat PB01_RS16725 PF00535 Glycosyl transferase family 2 PB01_RS16745 PF00367 phosphotransferase system, EIIB PB01_RS16745 PF02378 Phosphotransferase system, EIIC PB01_RS16750 PF02378 Phosphotransferase system, EIIC PB01_RS16750 PF00367 phosphotransferase system, EIIB PB01_RS16750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PB01_RS16770 PF13580 SIS domain PB01_RS16775 PF07702 UTRA domain PB01_RS16775 PF00392 Bacterial regulatory proteins, gntR family PB01_RS16780 PF01979 Amidohydrolase family PB01_RS16790 PF00488 MutS domain V PB01_RS16790 PF01713 Smr domain PB01_RS16815 PF00589 Phage integrase family PB01_RS16820 PF00589 Phage integrase family PB01_RS16820 PF02899 Phage integrase, N-terminal SAM-like domain PB01_RS16825 PF02899 Phage integrase, N-terminal SAM-like domain PB01_RS16825 PF00589 Phage integrase family PB01_RS16850 PF01348 Type II intron maturase PB01_RS16850 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) PB01_RS16855 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) PB01_RS16875 PF00975 Thioesterase domain PB01_RS16875 PF00550 Phosphopantetheine attachment site PB01_RS16875 PF00501 AMP-binding enzyme PB01_RS16875 PF13193 AMP-binding enzyme C-terminal domain PB01_RS16875 PF00668 Condensation domain PB01_RS16905 PF02768 DNA polymerase III beta subunit, C-terminal domain PB01_RS16905 PF02767 DNA polymerase III beta subunit, central domain PB01_RS16905 PF00712 DNA polymerase III beta subunit, N-terminal domain PB01_RS16910 PF02768 DNA polymerase III beta subunit, C-terminal domain PB01_RS16910 PF02767 DNA polymerase III beta subunit, central domain PB01_RS16910 PF00712 DNA polymerase III beta subunit, N-terminal domain PB01_RS16925 PF01063 Amino-transferase class IV PB01_RS16930 PF00067 Cytochrome P450 PB01_RS16940 PF01648 4'-phosphopantetheinyl transferase superfamily PB01_RS16945 PF00975 Thioesterase domain PB01_RS16950 PF00550 Phosphopantetheine attachment site PB01_RS16950 PF00668 Condensation domain PB01_RS16950 PF13193 AMP-binding enzyme C-terminal domain PB01_RS16950 PF00501 AMP-binding enzyme PB01_RS16950 PF07993 Male sterility protein PB01_RS16955 PF00668 Condensation domain PB01_RS16955 PF13193 AMP-binding enzyme C-terminal domain PB01_RS16955 PF00550 Phosphopantetheine attachment site PB01_RS16955 PF00975 Thioesterase domain PB01_RS16955 PF00501 AMP-binding enzyme PB01_RS16960 PF13193 AMP-binding enzyme C-terminal domain PB01_RS16960 PF00550 Phosphopantetheine attachment site PB01_RS16960 PF00975 Thioesterase domain PB01_RS16960 PF00501 AMP-binding enzyme PB01_RS16960 PF00668 Condensation domain PB01_RS16965 PF00550 Phosphopantetheine attachment site PB01_RS16965 PF00501 AMP-binding enzyme PB01_RS16965 PF13193 AMP-binding enzyme C-terminal domain PB01_RS16965 PF00668 Condensation domain PB01_RS16970 PF07690 Major Facilitator Superfamily PB01_RS16975 PF00083 Sugar (and other) transporter PB01_RS16975 PF07690 Major Facilitator Superfamily PB01_RS16985 PF00665 Integrase core domain PB01_RS16985 PF13276 HTH-like domain PB01_RS16985 PF13333 Integrase core domain PB01_RS17010 PF02767 DNA polymerase III beta subunit, central domain PB01_RS17010 PF00712 DNA polymerase III beta subunit, N-terminal domain PB01_RS17010 PF02768 DNA polymerase III beta subunit, C-terminal domain PB01_RS17060 PF00145 C-5 cytosine-specific DNA methylase PB01_RS17070 PF02515 CoA-transferase family III PB01_RS17075 PF02803 Thiolase, C-terminal domain PB01_RS17075 PF00108 Thiolase, N-terminal domain PB01_RS17080 PF12833 Helix-turn-helix domain PB01_RS17080 PF17853 GGDEF-like domain PB01_RS17085 PF00005 ABC transporter PB01_RS17090 PF12399 Branched-chain amino acid ATP-binding cassette transporter PB01_RS17090 PF00005 ABC transporter PB01_RS17095 PF02653 Branched-chain amino acid transport system / permease component PB01_RS17105 PF13458 Periplasmic binding protein PB01_RS17110 PF02586 SOS response associated peptidase (SRAP) PB01_RS17125 PF01638 HxlR-like helix-turn-helix PB01_RS17130 PF00881 Nitroreductase family PB01_RS17135 PF13407 Periplasmic binding protein domain PB01_RS17140 PF00072 Response regulator receiver domain PB01_RS17140 PF12833 Helix-turn-helix domain PB01_RS17145 PF02743 Cache domain PB01_RS17145 PF00672 HAMP domain PB01_RS17145 PF06580 Histidine kinase PB01_RS17145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS17155 PF02653 Branched-chain amino acid transport system / permease component PB01_RS17160 PF00005 ABC transporter PB01_RS17165 PF13407 Periplasmic binding protein domain PB01_RS17190 PF07693 KAP family P-loop domain PB01_RS17195 PF02796 Helix-turn-helix domain of resolvase PB01_RS17195 PF00239 Resolvase, N terminal domain PB01_RS17200 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) PB01_RS17210 PF01596 O-methyltransferase PB01_RS17215 PF03466 LysR substrate binding domain PB01_RS17215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PB01_RS17220 PF01695 IstB-like ATP binding protein PB01_RS17225 PF00665 Integrase core domain PB01_RS17240 PF00589 Phage integrase family PB01_RS17240 PF02899 Phage integrase, N-terminal SAM-like domain PB01_RS17245 PF00118 TCP-1/cpn60 chaperonin family PB01_RS17250 PF00166 Chaperonin 10 Kd subunit PB01_RS17255 PF02517 CPBP intramembrane metalloprotease PB01_RS17260 PF02629 CoA binding domain PB01_RS17260 PF06971 Putative DNA-binding protein N-terminus PB01_RS17265 PF12848 ABC transporter PB01_RS17265 PF16326 ABC transporter C-terminal domain PB01_RS17265 PF00005 ABC transporter PB01_RS17270 PF00814 Glycoprotease family PB01_RS17275 PF00583 Acetyltransferase (GNAT) family PB01_RS17280 PF00814 Glycoprotease family PB01_RS17285 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PB01_RS17290 PF13386 Cytochrome C biogenesis protein transmembrane region PB01_RS17295 PF01774 UreD urease accessory protein PB01_RS17300 PF02492 CobW/HypB/UreG, nucleotide-binding domain PB01_RS17305 PF01730 UreF PB01_RS17310 PF02814 UreE urease accessory protein, N-terminal domain PB01_RS17310 PF05194 UreE urease accessory protein, C-terminal domain PB01_RS17315 PF00449 Urease alpha-subunit, N-terminal domain PB01_RS17315 PF01979 Amidohydrolase family PB01_RS17320 PF00699 Urease beta subunit PB01_RS17325 PF00547 Urease, gamma subunit PB01_RS17330 PF03253 Urea transporter PB01_RS17340 PF01842 ACT domain PB01_RS17340 PF00551 Formyl transferase PB01_RS17345 PF06725 3D domain PB01_RS17345 PF01476 LysM domain PB01_RS17350 PF01297 Zinc-uptake complex component A periplasmic PB01_RS17355 PF00950 ABC 3 transport family PB01_RS17360 PF00005 ABC transporter PB01_RS17370 PF02627 Carboxymuconolactone decarboxylase family PB01_RS17375 PF00857 Isochorismatase family PB01_RS17395 PF05901 Excalibur calcium-binding domain PB01_RS17395 PF00565 Staphylococcal nuclease homologue PB01_RS17405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PB01_RS17405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PB01_RS17410 PF03006 Haemolysin-III related PB01_RS17415 PF00313 'Cold-shock' DNA-binding domain PB01_RS17435 PF02810 SEC-C motif PB01_RS17435 PF07517 SecA DEAD-like domain PB01_RS17435 PF01043 SecA preprotein cross-linking domain PB01_RS17435 PF07516 SecA Wing and Scaffold domain PB01_RS17440 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS17445 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS17450 PF01547 Bacterial extracellular solute-binding protein PB01_RS17460 PF00356 Bacterial regulatory proteins, lacI family PB01_RS17480 PF13411 MerR HTH family regulatory protein PB01_RS17490 PF07517 SecA DEAD-like domain PB01_RS17490 PF07516 SecA Wing and Scaffold domain PB01_RS17490 PF02810 SEC-C motif PB01_RS17490 PF01043 SecA preprotein cross-linking domain PB01_RS17495 PF12849 PBP superfamily domain PB01_RS17505 PF01842 ACT domain PB01_RS17505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PB01_RS17505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PB01_RS17510 PF01925 Sulfite exporter TauE/SafE PB01_RS17530 PF00005 ABC transporter PB01_RS17535 PF00392 Bacterial regulatory proteins, gntR family PB01_RS17630 PF10263 SprT-like family PB01_RS17630 PF17283 SprT-like zinc ribbon domain PB01_RS17635 PF16921 Tex protein YqgF-like domain PB01_RS17635 PF09371 Tex-like protein N-terminal domain PB01_RS17635 PF17674 HHH domain PB01_RS17635 PF00575 S1 RNA binding domain PB01_RS17645 PF04545 Sigma-70, region 4 PB01_RS17645 PF04539 Sigma-70 region 3 PB01_RS17645 PF04542 Sigma-70 region 2 PB01_RS17650 PF13581 Histidine kinase-like ATPase domain PB01_RS17655 PF01740 STAS domain PB01_RS17660 PF07228 Stage II sporulation protein E (SpoIIE) PB01_RS17660 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain PB01_RS17665 PF13581 Histidine kinase-like ATPase domain PB01_RS17670 PF01740 STAS domain PB01_RS17675 PF08678 Rsbr N terminal PB01_RS17675 PF01740 STAS domain PB01_RS17680 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system PB01_RS17690 PF01168 Alanine racemase, N-terminal domain PB01_RS17690 PF00842 Alanine racemase, C-terminal domain PB01_RS17700 PF01648 4'-phosphopantetheinyl transferase superfamily PB01_RS17705 PF01694 Rhomboid family PB01_RS17710 PF03703 Bacterial PH domain PB01_RS17715 PF03703 Bacterial PH domain PB01_RS17720 PF00271 Helicase conserved C-terminal domain PB01_RS17720 PF00270 DEAD/DEAH box helicase PB01_RS17725 PF00561 alpha/beta hydrolase fold PB01_RS17730 PF01225 Mur ligase family, catalytic domain PB01_RS17730 PF02875 Mur ligase family, glutamate ligase domain PB01_RS17730 PF08245 Mur ligase middle domain PB01_RS17735 PF07478 D-ala D-ala ligase C-terminus PB01_RS17735 PF01820 D-ala D-ala ligase N-terminus PB01_RS17745 PF01098 Cell cycle protein PB01_RS17750 PF00571 CBS domain PB01_RS17755 PF07690 Major Facilitator Superfamily PB01_RS17780 PF00375 Sodium:dicarboxylate symporter family PB01_RS17785 PF13396 Phospholipase_D-nuclease N-terminal PB01_RS17785 PF13091 PLD-like domain PB01_RS17790 PF02557 D-alanyl-D-alanine carboxypeptidase PB01_RS17800 PF02096 60Kd inner membrane protein PB01_RS17805 PF12833 Helix-turn-helix domain PB01_RS17835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PB01_RS17845 PF17783 CvfB-like winged helix domain PB01_RS17845 PF13509 S1 domain PB01_RS17850 PF01325 Iron dependent repressor, N-terminal DNA binding domain PB01_RS17850 PF02742 Iron dependent repressor, metal binding and dimerisation domain PB01_RS17855 PF02743 Cache domain PB01_RS17855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PB01_RS17855 PF00672 HAMP domain PB01_RS17875 PF00403 Heavy-metal-associated domain PB01_RS17880 PF01022 Bacterial regulatory protein, arsR family PB01_RS17885 PF01804 Penicillin amidase PB01_RS17890 PF01565 FAD binding domain PB01_RS17890 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PB01_RS17895 PF01638 HxlR-like helix-turn-helix PB01_RS17900 PF04264 YceI-like domain PB01_RS17910 PF01546 Peptidase family M20/M25/M40 PB01_RS17910 PF07687 Peptidase dimerisation domain PB01_RS17920 PF00664 ABC transporter transmembrane region PB01_RS17920 PF00005 ABC transporter PB01_RS17925 PF00005 ABC transporter PB01_RS17925 PF00664 ABC transporter transmembrane region PB01_RS17930 PF03551 Transcriptional regulator PadR-like family PB01_RS17935 PF01266 FAD dependent oxidoreductase PB01_RS17935 PF00355 Rieske [2Fe-2S] domain PB01_RS17945 PF01323 DSBA-like thioredoxin domain PB01_RS17950 PF02833 DHHA2 domain PB01_RS17950 PF01368 DHH family PB01_RS17955 PF02082 Transcriptional regulator PB01_RS17960 PF00970 Oxidoreductase FAD-binding domain PB01_RS17960 PF00042 Globin PB01_RS17960 PF00175 Oxidoreductase NAD-binding domain PB01_RS17970 PF02245 Methylpurine-DNA glycosylase (MPG) PB01_RS17980 PF07690 Major Facilitator Superfamily PB01_RS17985 PF00291 Pyridoxal-phosphate dependent enzyme PB01_RS17990 PF08544 GHMP kinases C terminal PB01_RS17990 PF00288 GHMP kinases N terminal domain PB01_RS17995 PF03167 Uracil DNA glycosylase superfamily PB01_RS18005 PF01497 Periplasmic binding protein PB01_RS18010 PF00005 ABC transporter PB01_RS18015 PF01032 FecCD transport family PB01_RS18020 PF01032 FecCD transport family PB01_RS18030 PF00854 POT family PB01_RS18035 PF00005 ABC transporter PB01_RS18035 PF00664 ABC transporter transmembrane region PB01_RS18040 PF01926 50S ribosome-binding GTPase PB01_RS18040 PF16360 GTP-binding GTPase Middle Region PB01_RS18040 PF13167 GTP-binding GTPase N-terminal PB01_RS18050 PF03553 Na+/H+ antiporter family PB01_RS18065 PF02687 FtsX-like permease family PB01_RS18065 PF12704 MacB-like periplasmic core domain PB01_RS18070 PF00005 ABC transporter PB01_RS18075 PF04542 Sigma-70 region 2 PB01_RS18075 PF08281 Sigma-70, region 4 PB01_RS18080 PF11738 Protein of unknown function (DUF3298) PB01_RS18080 PF13739 Deacetylase PdaC PB01_RS18090 PF00206 Lyase PB01_RS18090 PF10415 Fumarase C C-terminus PB01_RS18095 PF01966 HD domain PB01_RS18100 PF15975 Flotillin PB01_RS18100 PF01145 SPFH domain / Band 7 family PB01_RS18110 PF01865 Protein of unknown function DUF47 PB01_RS18115 PF01384 Phosphate transporter family PB01_RS18125 PF03176 MMPL family PB01_RS18130 PF01738 Dienelactone hydrolase family PB01_RS18135 PF07690 Major Facilitator Superfamily PB01_RS18150 PF01244 Membrane dipeptidase (Peptidase family M19) PB01_RS18155 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain PB01_RS18155 PF01113 Dihydrodipicolinate reductase, N-terminus PB01_RS18160 PF05163 DinB family PB01_RS18165 PF01541 GIY-YIG catalytic domain PB01_RS18170 PF07992 Pyridine nucleotide-disulphide oxidoreductase PB01_RS18175 PF04134 Protein of unknown function, DUF393 PB01_RS18180 PF01258 Prokaryotic dksA/traR C4-type zinc finger PB01_RS18195 PF00392 Bacterial regulatory proteins, gntR family PB01_RS18195 PF07729 FCD domain PB01_RS18200 PF05525 Branched-chain amino acid transport protein PB01_RS18205 PF07690 Major Facilitator Superfamily PB01_RS18210 PF07690 Major Facilitator Superfamily PB01_RS18215 PF04239 Protein of unknown function (DUF421) PB01_RS18220 PF00933 Glycosyl hydrolase family 3 N terminal domain PB01_RS18220 PF01915 Glycosyl hydrolase family 3 C-terminal domain PB01_RS18230 PF00300 Histidine phosphatase superfamily (branch 1) PB01_RS18235 PF13411 MerR HTH family regulatory protein PB01_RS18235 PF07739 TipAS antibiotic-recognition domain PB01_RS18245 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PB01_RS18250 PF03551 Transcriptional regulator PadR-like family PB01_RS18270 PF02767 DNA polymerase III beta subunit, central domain PB01_RS18270 PF02768 DNA polymerase III beta subunit, C-terminal domain PB01_RS18270 PF00712 DNA polymerase III beta subunit, N-terminal domain PB01_RS18280 PF01487 Type I 3-dehydroquinase PB01_RS18285 PF00583 Acetyltransferase (GNAT) family PB01_RS18290 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PB01_RS18290 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PB01_RS18295 PF12833 Helix-turn-helix domain PB01_RS18295 PF02805 Metal binding domain of Ada PB01_RS18300 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain PB01_RS18300 PF00730 HhH-GPD superfamily base excision DNA repair protein PB01_RS18310 PF13732 Domain of unknown function (DUF4162) PB01_RS18310 PF00005 ABC transporter PB01_RS18320 PF16868 NMT1-like family PB01_RS18330 PF12848 ABC transporter PB01_RS18330 PF00005 ABC transporter PB01_RS18350 PF00293 NUDIX domain PB01_RS18350 PF09297 NADH pyrophosphatase zinc ribbon domain PB01_RS18360 PF01709 Transcriptional regulator PB01_RS18380 PF01047 MarR family PB01_RS18390 PF00293 NUDIX domain PB01_RS18395 PF06445 GyrI-like small molecule binding domain PB01_RS18395 PF12833 Helix-turn-helix domain PB01_RS18415 PF13427 Domain of unknown function (DUF4111) PB01_RS18415 PF01909 Nucleotidyltransferase domain PB01_RS18425 PF02824 TGS domain PB01_RS18425 PF03129 Anticodon binding domain PB01_RS18425 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PB01_RS18425 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PB01_RS18430 PF07992 Pyridine nucleotide-disulphide oxidoreductase PB01_RS18430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PB01_RS18435 PF08264 Anticodon-binding domain of tRNA PB01_RS18435 PF09334 tRNA synthetases class I (M) PB01_RS18440 PF06628 Catalase-related immune-responsive PB01_RS18440 PF18011 C-terminal domain found in long catalases PB01_RS18440 PF00199 Catalase PB01_RS18455 PF00486 Transcriptional regulatory protein, C terminal PB01_RS18455 PF00072 Response regulator receiver domain PB01_RS18460 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS18460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS18480 PF00356 Bacterial regulatory proteins, lacI family PB01_RS18485 PF01156 Inosine-uridine preferring nucleoside hydrolase PB01_RS18490 PF00294 pfkB family carbohydrate kinase PB01_RS18495 PF02416 mttA/Hcf106 family PB01_RS18500 PF13411 MerR HTH family regulatory protein PB01_RS18515 PF02687 FtsX-like permease family PB01_RS18520 PF00005 ABC transporter PB01_RS18525 PF03441 FAD binding domain of DNA photolyase PB01_RS18525 PF00875 DNA photolyase PB01_RS18530 PF00875 DNA photolyase PB01_RS18530 PF03441 FAD binding domain of DNA photolyase PB01_RS18535 PF00155 Aminotransferase class I and II PB01_RS18540 PF01554 MatE PB01_RS18555 PF00892 EamA-like transporter family PB01_RS18570 PF16363 GDP-mannose 4,6 dehydratase PB01_RS18580 PF00534 Glycosyl transferases group 1 PB01_RS18590 PF02719 Polysaccharide biosynthesis protein PB01_RS18600 PF00005 ABC transporter PB01_RS18605 PF01032 FecCD transport family PB01_RS18610 PF01032 FecCD transport family PB01_RS18615 PF01497 Periplasmic binding protein PB01_RS18650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PB01_RS18650 PF02874 ATP synthase alpha/beta family, beta-barrel domain PB01_RS18655 PF00672 HAMP domain PB01_RS18655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PB01_RS18655 PF17202 Single cache domain 3 PB01_RS18660 PF00485 Phosphoribulokinase / Uridine kinase family PB01_RS18675 PF01773 Na+ dependent nucleoside transporter N-terminus PB01_RS18675 PF07662 Na+ dependent nucleoside transporter C-terminus PB01_RS18690 PF07155 ECF-type riboflavin transporter, S component PB01_RS18695 PF12558 ATP-binding cassette cobalt transporter PB01_RS18695 PF00005 ABC transporter PB01_RS18700 PF02361 Cobalt transport protein PB01_RS18705 PF02801 Beta-ketoacyl synthase, C-terminal domain PB01_RS18705 PF00109 Beta-ketoacyl synthase, N-terminal domain PB01_RS18705 PF00698 Acyl transferase domain PB01_RS18705 PF00107 Zinc-binding dehydrogenase PB01_RS18705 PF08240 Alcohol dehydrogenase GroES-like domain PB01_RS18705 PF00550 Phosphopantetheine attachment site PB01_RS18705 PF16197 Ketoacyl-synthetase C-terminal extension PB01_RS18705 PF14765 Polyketide synthase dehydratase PB01_RS18705 PF08659 KR domain PB01_RS18715 PF02525 Flavodoxin-like fold PB01_RS18720 PF00440 Bacterial regulatory proteins, tetR family PB01_RS18720 PF17922 Tetracyclin repressor-like, C-terminal domain PB01_RS18725 PF07690 Major Facilitator Superfamily PB01_RS18745 PF00342 Phosphoglucose isomerase PB01_RS18750 PF00128 Alpha amylase, catalytic domain PB01_RS18750 PF16657 Maltogenic Amylase, C-terminal domain PB01_RS18755 PF00356 Bacterial regulatory proteins, lacI family PB01_RS18760 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS18765 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS18775 PF00480 ROK family PB01_RS18780 PF16657 Maltogenic Amylase, C-terminal domain PB01_RS18780 PF00128 Alpha amylase, catalytic domain PB01_RS18785 PF10942 Protein of unknown function (DUF2619) PB01_RS18790 PF03831 PhnA domain PB01_RS18790 PF08274 PhnA Zinc-Ribbon PB01_RS18795 PF16916 Dimerisation domain of Zinc Transporter PB01_RS18795 PF01545 Cation efflux family PB01_RS18805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PB01_RS18810 PF00171 Aldehyde dehydrogenase family PB01_RS18815 PF00701 Dihydrodipicolinate synthetase family PB01_RS18820 PF01613 Flavin reductase like domain PB01_RS18825 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal PB01_RS18825 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal PB01_RS18830 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase PB01_RS18835 PF01557 Fumarylacetoacetate (FAA) hydrolase family PB01_RS18840 PF01557 Fumarylacetoacetate (FAA) hydrolase family PB01_RS18845 PF00005 ABC transporter PB01_RS18860 PF07992 Pyridine nucleotide-disulphide oxidoreductase PB01_RS18860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PB01_RS18865 PF02817 e3 binding domain PB01_RS18865 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PB01_RS18865 PF00364 Biotin-requiring enzyme PB01_RS18870 PF02780 Transketolase, C-terminal domain PB01_RS18870 PF02779 Transketolase, pyrimidine binding domain PB01_RS18875 PF00676 Dehydrogenase E1 component PB01_RS18880 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PB01_RS18880 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PB01_RS18890 PF03060 Nitronate monooxygenase PB01_RS18895 PF00132 Bacterial transferase hexapeptide (six repeats) PB01_RS18900 PF07848 PaaX-like protein PB01_RS18900 PF08223 PaaX-like protein C-terminal domain PB01_RS18905 PF00378 Enoyl-CoA hydratase/isomerase PB01_RS18910 PF00108 Thiolase, N-terminal domain PB01_RS18910 PF02803 Thiolase, C-terminal domain PB01_RS18915 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PB01_RS18915 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PB01_RS18920 PF00171 Aldehyde dehydrogenase family PB01_RS18925 PF00378 Enoyl-CoA hydratase/isomerase PB01_RS18930 PF00378 Enoyl-CoA hydratase/isomerase PB01_RS18955 PF05138 Phenylacetic acid catabolic protein PB01_RS18960 PF07992 Pyridine nucleotide-disulphide oxidoreductase PB01_RS18965 PF00501 AMP-binding enzyme PB01_RS18965 PF14535 AMP-binding enzyme C-terminal domain PB01_RS18970 PF05163 DinB family PB01_RS18975 PF02073 Thermophilic metalloprotease (M29) PB01_RS18985 PF13416 Bacterial extracellular solute-binding protein PB01_RS18990 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS18995 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS19000 PF00356 Bacterial regulatory proteins, lacI family PB01_RS19005 PF00232 Glycosyl hydrolase family 1 PB01_RS19010 PF12679 ABC-2 family transporter protein PB01_RS19015 PF00005 ABC transporter PB01_RS19020 PF00072 Response regulator receiver domain PB01_RS19020 PF04397 LytTr DNA-binding domain PB01_RS19040 PF03816 Cell envelope-related transcriptional attenuator domain PB01_RS19050 PF03323 Bacillus/Clostridium GerA spore germination protein PB01_RS19055 PF03845 Spore germination protein PB01_RS19060 PF01554 MatE PB01_RS19075 PF01061 ABC-2 type transporter PB01_RS19080 PF00005 ABC transporter PB01_RS19080 PF13732 Domain of unknown function (DUF4162) PB01_RS19085 PF03352 Methyladenine glycosylase PB01_RS19090 PF03737 Aldolase/RraA PB01_RS19110 PF01037 Lrp/AsnC ligand binding domain PB01_RS19120 PF00440 Bacterial regulatory proteins, tetR family PB01_RS19120 PF08361 MAATS-type transcriptional repressor, C-terminal region PB01_RS19150 PF00005 ABC transporter PB01_RS19165 PF01596 O-methyltransferase PB01_RS19175 PF01872 RibD C-terminal domain PB01_RS19180 PF00209 Sodium:neurotransmitter symporter family PB01_RS19200 PF13443 Cro/C1-type HTH DNA-binding domain PB01_RS19205 PF11188 Protein of unknown function (DUF2975) PB01_RS19215 PF00665 Integrase core domain PB01_RS19220 PF01695 IstB-like ATP binding protein PB01_RS19270 PF13401 AAA domain PB01_RS19270 PF11426 Tn7 transposition regulator TnsC PB01_RS19275 PF00665 Integrase core domain PB01_RS19280 PF08722 TnsA endonuclease N terminal PB01_RS19280 PF08721 TnsA endonuclease C terminal PB01_RS19290 PF01380 SIS domain PB01_RS19295 PF02417 Chromate transporter PB01_RS19300 PF02417 Chromate transporter PB01_RS19310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PB01_RS19310 PF00005 ABC transporter PB01_RS19315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PB01_RS19315 PF00005 ABC transporter PB01_RS19320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PB01_RS19325 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS19325 PF12911 N-terminal TM domain of oligopeptide transport permease C PB01_RS19330 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS19335 PF13404 AsnC-type helix-turn-helix domain PB01_RS19335 PF01037 Lrp/AsnC ligand binding domain PB01_RS19340 PF01965 DJ-1/PfpI family PB01_RS19345 PF08240 Alcohol dehydrogenase GroES-like domain PB01_RS19345 PF00107 Zinc-binding dehydrogenase PB01_RS19350 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PB01_RS19350 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PB01_RS19350 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PB01_RS19350 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PB01_RS19360 PF02457 DisA bacterial checkpoint controller nucleotide-binding PB01_RS19365 PF13490 Putative zinc-finger PB01_RS19370 PF08281 Sigma-70, region 4 PB01_RS19370 PF04542 Sigma-70 region 2 PB01_RS19375 PF00491 Arginase family PB01_RS19385 PF00285 Citrate synthase, C-terminal domain PB01_RS19390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PB01_RS19390 PF03466 LysR substrate binding domain PB01_RS19455 PF14089 KinB-signalling pathway activation in sporulation PB01_RS19460 PF17898 Spore germination GerD central core domain PB01_RS19465 PF10609 NUBPL iron-transfer P-loop NTPase PB01_RS19470 PF01520 N-acetylmuramoyl-L-alanine amidase PB01_RS19480 PF07690 Major Facilitator Superfamily PB01_RS19490 PF00324 Amino acid permease PB01_RS19495 PF00380 Ribosomal protein S9/S16 PB01_RS19500 PF00572 Ribosomal protein L13 PB01_RS19505 PF01416 tRNA pseudouridine synthase PB01_RS19510 PF02361 Cobalt transport protein PB01_RS19515 PF00005 ABC transporter PB01_RS19520 PF00005 ABC transporter PB01_RS19525 PF01196 Ribosomal protein L17 PB01_RS19530 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PB01_RS19530 PF01000 RNA polymerase Rpb3/RpoA insert domain PB01_RS19530 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PB01_RS19535 PF00411 Ribosomal protein S11 PB01_RS19540 PF00416 Ribosomal protein S13/S18 PB01_RS19545 PF00444 Ribosomal protein L36 PB01_RS19550 PF01176 Translation initiation factor 1A / IF-1 PB01_RS19555 PF05191 Adenylate kinase, active site lid PB01_RS19560 PF00344 SecY translocase PB01_RS19565 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PB01_RS19570 PF00327 Ribosomal protein L30p/L7e PB01_RS19575 PF00333 Ribosomal protein S5, N-terminal domain PB01_RS19575 PF03719 Ribosomal protein S5, C-terminal domain PB01_RS19580 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PB01_RS19585 PF00347 Ribosomal protein L6 PB01_RS19590 PF00410 Ribosomal protein S8 PB01_RS19595 PF00253 Ribosomal protein S14p/S29e PB01_RS19600 PF00673 ribosomal L5P family C-terminus PB01_RS19600 PF00281 Ribosomal protein L5 PB01_RS19605 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PB01_RS19605 PF00467 KOW motif PB01_RS19610 PF00238 Ribosomal protein L14p/L23e PB01_RS19615 PF00366 Ribosomal protein S17 PB01_RS19620 PF00831 Ribosomal L29 protein PB01_RS19625 PF00252 Ribosomal protein L16p/L10e PB01_RS19630 PF00189 Ribosomal protein S3, C-terminal domain PB01_RS19630 PF07650 KH domain PB01_RS19635 PF00237 Ribosomal protein L22p/L17e PB01_RS19640 PF00203 Ribosomal protein S19 PB01_RS19645 PF03947 Ribosomal Proteins L2, C-terminal domain PB01_RS19645 PF00181 Ribosomal Proteins L2, RNA binding domain PB01_RS19650 PF00276 Ribosomal protein L23 PB01_RS19655 PF00573 Ribosomal protein L4/L1 family PB01_RS19660 PF00297 Ribosomal protein L3 PB01_RS19665 PF00338 Ribosomal protein S10p/S20e PB01_RS19670 PF03553 Na+/H+ antiporter family PB01_RS19670 PF13726 Na+-H+ antiporter family PB01_RS19675 PF00009 Elongation factor Tu GTP binding domain PB01_RS19675 PF03144 Elongation factor Tu domain 2 PB01_RS19675 PF03143 Elongation factor Tu C-terminal domain PB01_RS19680 PF00679 Elongation factor G C-terminus PB01_RS19680 PF14492 Elongation Factor G, domain II PB01_RS19680 PF03764 Elongation factor G, domain IV PB01_RS19680 PF00009 Elongation factor Tu GTP binding domain PB01_RS19680 PF03144 Elongation factor Tu domain 2 PB01_RS19685 PF00177 Ribosomal protein S7p/S5e PB01_RS19690 PF00164 Ribosomal protein S12/S23 PB01_RS19695 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PB01_RS19700 PF05000 RNA polymerase Rpb1, domain 4 PB01_RS19700 PF04998 RNA polymerase Rpb1, domain 5 PB01_RS19700 PF00623 RNA polymerase Rpb1, domain 2 PB01_RS19700 PF04997 RNA polymerase Rpb1, domain 1 PB01_RS19700 PF04983 RNA polymerase Rpb1, domain 3 PB01_RS19705 PF10385 RNA polymerase beta subunit external 1 domain PB01_RS19705 PF04565 RNA polymerase Rpb2, domain 3 PB01_RS19705 PF00562 RNA polymerase Rpb2, domain 6 PB01_RS19705 PF04563 RNA polymerase beta subunit PB01_RS19705 PF04560 RNA polymerase Rpb2, domain 7 PB01_RS19705 PF04561 RNA polymerase Rpb2, domain 2 PB01_RS19710 PF05175 Methyltransferase small domain PB01_RS19715 PF00542 Ribosomal protein L7/L12 C-terminal domain PB01_RS19715 PF16320 Ribosomal protein L7/L12 dimerisation domain PB01_RS19720 PF00466 Ribosomal protein L10 PB01_RS19725 PF00687 Ribosomal protein L1p/L10e family PB01_RS19730 PF03946 Ribosomal protein L11, N-terminal domain PB01_RS19730 PF00298 Ribosomal protein L11, RNA binding domain PB01_RS19735 PF02357 Transcription termination factor nusG PB01_RS19735 PF00467 KOW motif PB01_RS19740 PF00584 SecE/Sec61-gamma subunits of protein translocation complex PB01_RS19745 PF00471 Ribosomal protein L33 PB01_RS19750 PF08281 Sigma-70, region 4 PB01_RS19750 PF04542 Sigma-70 region 2 PB01_RS19755 PF05991 YacP-like NYN domain PB01_RS19760 PF08032 RNA 2'-O ribose methyltransferase substrate binding PB01_RS19760 PF00588 SpoU rRNA Methylase family PB01_RS19765 PF00636 Ribonuclease III domain PB01_RS19770 PF01406 tRNA synthetases class I (C) catalytic domain PB01_RS19770 PF09190 DALR domain PB01_RS19775 PF00132 Bacterial transferase hexapeptide (six repeats) PB01_RS19780 PF00749 tRNA synthetases class I (E and Q), catalytic domain PB01_RS19785 PF02542 YgbB family PB01_RS19790 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PB01_RS19800 PF18073 Rubredoxin metal binding domain PB01_RS19805 PF17871 AAA lid domain PB01_RS19805 PF02861 Clp amino terminal domain, pathogenicity island component PB01_RS19805 PF10431 C-terminal, D2-small domain, of ClpB protein PB01_RS19805 PF00004 ATPase family associated with various cellular activities (AAA) PB01_RS19805 PF07724 AAA domain (Cdc48 subfamily) PB01_RS19810 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain PB01_RS19820 PF05848 CtsR N-terminal HTH domain PB01_RS19820 PF17727 CtsR C-terminal dimerization domain PB01_RS19825 PF03193 RsgA GTPase PB01_RS19830 PF12679 ABC-2 family transporter protein PB01_RS19835 PF00005 ABC transporter PB01_RS19840 PF00005 ABC transporter PB01_RS19840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PB01_RS19845 PF00877 NlpC/P60 family PB01_RS19850 PF13378 Enolase C-terminal domain-like PB01_RS19850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PB01_RS19855 PF17676 LD-carboxypeptidase C-terminal domain PB01_RS19855 PF02016 LD-carboxypeptidase N-terminal domain PB01_RS19860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PB01_RS19865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PB01_RS19865 PF00005 ABC transporter PB01_RS19870 PF12911 N-terminal TM domain of oligopeptide transport permease C PB01_RS19870 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS19875 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS19880 PF04951 D-aminopeptidase PB01_RS19890 PF01544 CorA-like Mg2+ transporter protein PB01_RS19895 PF01139 tRNA-splicing ligase RtcB PB01_RS19910 PF03061 Thioesterase superfamily PB01_RS19920 PF00849 RNA pseudouridylate synthase PB01_RS19920 PF01479 S4 domain PB01_RS19925 PF08327 Activator of Hsp90 ATPase homolog 1-like protein PB01_RS19930 PF01022 Bacterial regulatory protein, arsR family PB01_RS19935 PF08245 Mur ligase middle domain PB01_RS19935 PF02875 Mur ligase family, glutamate ligase domain PB01_RS19935 PF01225 Mur ligase family, catalytic domain PB01_RS19945 PF01740 STAS domain PB01_RS19945 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain PB01_RS19960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PB01_RS19960 PF01411 tRNA synthetases class II (A) PB01_RS19960 PF02272 DHHA1 domain PB01_RS19975 PF01047 MarR family PB01_RS19980 PF07690 Major Facilitator Superfamily PB01_RS19985 PF00080 Copper/zinc superoxide dismutase (SODC) PB01_RS19985 PF13627 Prokaryotic lipoprotein-attachment site PB01_RS19990 PF14504 CAP-associated N-terminal PB01_RS19990 PF00188 Cysteine-rich secretory protein family PB01_RS20000 PF00881 Nitroreductase family PB01_RS20010 PF00171 Aldehyde dehydrogenase family PB01_RS20015 PF00296 Luciferase-like monooxygenase PB01_RS20020 PF09335 SNARE associated Golgi protein PB01_RS20025 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 PB01_RS20025 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) PB01_RS20030 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PB01_RS20030 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PB01_RS20035 PF00072 Response regulator receiver domain PB01_RS20035 PF04397 LytTr DNA-binding domain PB01_RS20055 PF12833 Helix-turn-helix domain PB01_RS20055 PF06445 GyrI-like small molecule binding domain PB01_RS20080 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS20085 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS20090 PF12849 PBP superfamily domain PB01_RS20100 PF00679 Elongation factor G C-terminus PB01_RS20100 PF03764 Elongation factor G, domain IV PB01_RS20100 PF00009 Elongation factor Tu GTP binding domain PB01_RS20100 PF14492 Elongation Factor G, domain II PB01_RS20115 PF03601 Conserved hypothetical protein 698 PB01_RS20120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PB01_RS20120 PF03466 LysR substrate binding domain PB01_RS20135 PF09587 Bacterial capsule synthesis protein PGA_cap PB01_RS20150 PF00005 ABC transporter PB01_RS20155 PF01032 FecCD transport family PB01_RS20165 PF00005 ABC transporter PB01_RS20185 PF02653 Branched-chain amino acid transport system / permease component PB01_RS20190 PF00005 ABC transporter PB01_RS20200 PF01008 Initiation factor 2 subunit family PB01_RS20205 PF01636 Phosphotransferase enzyme family PB01_RS20210 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain PB01_RS20210 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain PB01_RS20220 PF00596 Class II Aldolase and Adducin N-terminal domain PB01_RS20225 PF03079 ARD/ARD' family PB01_RS20230 PF00902 Sec-independent protein translocase protein (TatC) PB01_RS20235 PF02416 mttA/Hcf106 family PB01_RS20240 PF00563 EAL domain PB01_RS20240 PF12792 CSS motif domain associated with EAL PB01_RS20250 PF03992 Antibiotic biosynthesis monooxygenase PB01_RS20255 PF01047 MarR family PB01_RS20260 PF07690 Major Facilitator Superfamily PB01_RS20275 PF00005 ABC transporter PB01_RS20280 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS20285 PF00497 Bacterial extracellular solute-binding proteins, family 3 PB01_RS20290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PB01_RS20290 PF02743 Cache domain PB01_RS20290 PF00672 HAMP domain PB01_RS20295 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS20300 PF00528 Binding-protein-dependent transport system inner membrane component PB01_RS20305 PF00005 ABC transporter PB01_RS20315 PF00149 Calcineurin-like phosphoesterase PB01_RS20315 PF02872 5'-nucleotidase, C-terminal domain PB01_RS20350 PF00884 Sulfatase PB01_RS20350 PF16347 Domain of unknown function (DUF4976) PB01_RS20355 PF00375 Sodium:dicarboxylate symporter family PB01_RS20360 PF08664 YcbB domain PB01_RS20360 PF00072 Response regulator receiver domain PB01_RS20365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS20370 PF13302 Acetyltransferase (GNAT) domain PB01_RS20375 PF07155 ECF-type riboflavin transporter, S component PB01_RS20405 PF04055 Radical SAM superfamily PB01_RS20420 PF02599 Global regulator protein family PB01_RS20425 PF02599 Global regulator protein family PB01_RS20435 PF00700 Bacterial flagellin C-terminal helical region PB01_RS20435 PF00669 Bacterial flagellin N-terminal helical region PB01_RS20440 PF00072 Response regulator receiver domain PB01_RS20440 PF00486 Transcriptional regulatory protein, C terminal PB01_RS20445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS20445 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS20445 PF08448 PAS fold PB01_RS20445 PF13426 PAS domain PB01_RS20445 PF00072 Response regulator receiver domain PB01_RS20450 PF02590 Predicted SPOUT methyltransferase PB01_RS20460 PF13180 PDZ domain PB01_RS20470 PF00753 Metallo-beta-lactamase superfamily PB01_RS20475 PF09648 YycH protein PB01_RS20485 PF00672 HAMP domain PB01_RS20485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PB01_RS20485 PF00512 His Kinase A (phospho-acceptor) domain PB01_RS20485 PF13426 PAS domain PB01_RS20490 PF00486 Transcriptional regulatory protein, C terminal PB01_RS20490 PF00072 Response regulator receiver domain PB01_RS20495 PF01551 Peptidase family M23 PB01_RS20500 PF00709 Adenylosuccinate synthetase PB01_RS20505 PF00772 DnaB-like helicase N terminal domain PB01_RS20505 PF03796 DnaB-like helicase C terminal domain PB01_RS20510 PF01281 Ribosomal protein L9, N-terminal domain PB01_RS20510 PF03948 Ribosomal protein L9, C-terminal domain PB01_RS20515 PF02272 DHHA1 domain PB01_RS20515 PF01368 DHH family PB01_RS20520 PF09991 Predicted membrane protein (DUF2232) PB01_RS20525 PF01084 Ribosomal protein S18 PB01_RS20530 PF00436 Single-strand binding protein family PB01_RS20535 PF01250 Ribosomal protein S6 PB01_RS20550 PF01926 50S ribosome-binding GTPase PB01_RS20550 PF06071 Protein of unknown function (DUF933) PB01_RS20555 PF06107 Bacterial protein of unknown function (DUF951) PB01_RS20560 PF00924 Mechanosensitive ion channel PB01_RS20565 PF06866 Protein of unknown function (DUF1256) PB01_RS20570 PF04474 Protein of unknown function (DUF554) PB01_RS20575 PF02195 ParB-like nuclease domain PB01_RS20575 PF17762 HTH domain found in ParB protein PB01_RS20580 PF13614 AAA domain PB01_RS20585 PF17762 HTH domain found in ParB protein PB01_RS20585 PF02195 ParB-like nuclease domain PB01_RS20590 PF02527 rRNA small subunit methyltransferase G PB01_RS20595 PF01134 Glucose inhibited division protein A PB01_RS20595 PF13932 GidA associated domain PB01_RS20600 PF12631 MnmE helical domain PB01_RS20600 PF10396 GTP-binding protein TrmE N-terminus PB01_RS20600 PF01926 50S ribosome-binding GTPase PB01_RS20605 PF01424 R3H domain PB01_RS20605 PF14804 Jag N-terminus PB01_RS20610 PF02096 60Kd inner membrane protein PB01_RS20615 PF00825 Ribonuclease P PB01_RS20620 PF00468 Ribosomal protein L34 PB01_RS20655 PF18106 Rolling Circle replication initiation protein N-terminal domain PB01_RS20655 PF02486 Replication initiation factor PB01_RS20660 PF01520 N-acetylmuramoyl-L-alanine amidase PB01_RS20660 PF08239 Bacterial SH3 domain PB01_RS20665 PF00436 Single-strand binding protein family PB01_RS20670 PF00589 Phage integrase family PB01_RS20670 PF02899 Phage integrase, N-terminal SAM-like domain PB01_RS20705 PF00239 Resolvase, N terminal domain PB01_RS20705 PF02796 Helix-turn-helix domain of resolvase PB01_RS20740 PF00145 C-5 cytosine-specific DNA methylase