locus-tag class description AA042_RS00060 PF13244 Domain of unknown function (DUF4040) AA042_RS00060 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AA042_RS00060 PF00361 Proton-conducting membrane transporter AA042_RS00060 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AA042_RS00065 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AA042_RS00070 PF00361 Proton-conducting membrane transporter AA042_RS00080 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AA042_RS00085 PF03334 Na+/H+ antiporter subunit AA042_RS00090 PF00939 Sodium:sulfate symporter transmembrane region AA042_RS00100 PF02472 Biopolymer transport protein ExbD/TolR AA042_RS00105 PF01618 MotA/TolQ/ExbB proton channel family AA042_RS00110 PF02333 Phytase AA042_RS00120 PF05231 MASE1 AA042_RS00120 PF00563 EAL domain AA042_RS00120 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS00120 PF08447 PAS fold AA042_RS00120 PF08448 PAS fold AA042_RS00120 PF13426 PAS domain AA042_RS00130 PF02615 Malate/L-lactate dehydrogenase AA042_RS00140 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA042_RS00145 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS00150 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS00160 PF00005 ABC transporter AA042_RS00165 PF03717 Penicillin-binding Protein dimerisation domain AA042_RS00165 PF00905 Penicillin binding protein transpeptidase domain AA042_RS00170 PF07969 Amidohydrolase family AA042_RS00180 PF02560 Cyanate lyase C-terminal domain AA042_RS00185 PF00484 Carbonic anhydrase AA042_RS00190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS00190 PF03466 LysR substrate binding domain AA042_RS00215 PF00905 Penicillin binding protein transpeptidase domain AA042_RS00215 PF03717 Penicillin-binding Protein dimerisation domain AA042_RS00220 PF01183 Glycosyl hydrolases family 25 AA042_RS00230 PF01066 CDP-alcohol phosphatidyltransferase AA042_RS00235 PF01541 GIY-YIG catalytic domain AA042_RS00235 PF08459 UvrC Helix-hairpin-helix N-terminal AA042_RS00235 PF02151 UvrB/uvrC motif AA042_RS00240 PF00196 Bacterial regulatory proteins, luxR family AA042_RS00240 PF00072 Response regulator receiver domain AA042_RS00255 PF00793 DAHP synthetase I family AA042_RS00260 PF00561 alpha/beta hydrolase fold AA042_RS00265 PF05698 Bacterial trigger factor protein (TF) C-terminus AA042_RS00270 PF00106 short chain dehydrogenase AA042_RS00275 PF00378 Enoyl-CoA hydratase/isomerase AA042_RS00280 PF02770 Acyl-CoA dehydrogenase, middle domain AA042_RS00280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS00280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS00285 PF00378 Enoyl-CoA hydratase/isomerase AA042_RS00290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS00290 PF02770 Acyl-CoA dehydrogenase, middle domain AA042_RS00290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS00295 PF02803 Thiolase, C-terminal domain AA042_RS00295 PF00108 Thiolase, N-terminal domain AA042_RS00300 PF00106 short chain dehydrogenase AA042_RS00305 PF00501 AMP-binding enzyme AA042_RS00305 PF13193 AMP-binding enzyme C-terminal domain AA042_RS00330 PF00766 Electron transfer flavoprotein FAD-binding domain AA042_RS00330 PF01012 Electron transfer flavoprotein domain AA042_RS00335 PF01012 Electron transfer flavoprotein domain AA042_RS00340 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AA042_RS00345 PF02770 Acyl-CoA dehydrogenase, middle domain AA042_RS00345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS00345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS00350 PF02515 CoA-transferase family III AA042_RS00355 PF01175 Urocanase Rossmann-like domain AA042_RS00355 PF17391 Urocanase N-terminal domain AA042_RS00355 PF17392 Urocanase C-terminal domain AA042_RS00360 PF00392 Bacterial regulatory proteins, gntR family AA042_RS00360 PF07702 UTRA domain AA042_RS00365 PF06912 Protein of unknown function (DUF1275) AA042_RS00375 PF00892 EamA-like transporter family AA042_RS00380 PF03466 LysR substrate binding domain AA042_RS00380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS00395 PF00005 ABC transporter AA042_RS00410 PF09339 IclR helix-turn-helix domain AA042_RS00410 PF01614 Bacterial transcriptional regulator AA042_RS00415 PF03773 Predicted permease AA042_RS00425 PF01740 STAS domain AA042_RS00425 PF00916 Sulfate permease family AA042_RS00430 PF12833 Helix-turn-helix domain AA042_RS00435 PF00355 Rieske [2Fe-2S] domain AA042_RS00465 PF01554 MatE AA042_RS00470 PF02803 Thiolase, C-terminal domain AA042_RS00470 PF00108 Thiolase, N-terminal domain AA042_RS00475 PF01575 MaoC like domain AA042_RS00485 PF00106 short chain dehydrogenase AA042_RS00490 PF02803 Thiolase, C-terminal domain AA042_RS00490 PF00108 Thiolase, N-terminal domain AA042_RS00495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS00495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS00495 PF02770 Acyl-CoA dehydrogenase, middle domain AA042_RS00505 PF00378 Enoyl-CoA hydratase/isomerase AA042_RS00510 PF03551 Transcriptional regulator PadR-like family AA042_RS00540 PF02770 Acyl-CoA dehydrogenase, middle domain AA042_RS00540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS00540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS00545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS00545 PF02770 Acyl-CoA dehydrogenase, middle domain AA042_RS00545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS00590 PF01258 Prokaryotic dksA/traR C4-type zinc finger AA042_RS00595 PF02653 Branched-chain amino acid transport system / permease component AA042_RS00600 PF00005 ABC transporter AA042_RS00605 PF13407 Periplasmic binding protein domain AA042_RS00615 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AA042_RS00615 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AA042_RS00625 PF00171 Aldehyde dehydrogenase family AA042_RS00630 PF04962 KduI/IolB family AA042_RS00635 PF01261 Xylose isomerase-like TIM barrel AA042_RS00640 PF00294 pfkB family carbohydrate kinase AA042_RS00645 PF01380 SIS domain AA042_RS00645 PF01418 Helix-turn-helix domain, rpiR family AA042_RS00665 PF00563 EAL domain AA042_RS00665 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS00670 PF02321 Outer membrane efflux protein AA042_RS00680 PF00873 AcrB/AcrD/AcrF family AA042_RS00685 PF13533 Biotin-lipoyl like AA042_RS00690 PF08534 Redoxin AA042_RS00700 PF11769 Protein of unknown function (DUF3313) AA042_RS00705 PF00115 Cytochrome C and Quinol oxidase polypeptide I AA042_RS00715 PF00923 Transaldolase/Fructose-6-phosphate aldolase AA042_RS00740 PF08323 Starch synthase catalytic domain AA042_RS00740 PF00534 Glycosyl transferases group 1 AA042_RS00745 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AA042_RS00745 PF00128 Alpha amylase, catalytic domain AA042_RS00745 PF11941 Domain of unknown function (DUF3459) AA042_RS00755 PF00128 Alpha amylase, catalytic domain AA042_RS00765 PF00128 Alpha amylase, catalytic domain AA042_RS00765 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AA042_RS00790 PF03372 Endonuclease/Exonuclease/phosphatase family AA042_RS00795 PF02806 Alpha amylase, C-terminal all-beta domain AA042_RS00795 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AA042_RS00795 PF00128 Alpha amylase, catalytic domain AA042_RS00800 PF16657 Maltogenic Amylase, C-terminal domain AA042_RS00800 PF00128 Alpha amylase, catalytic domain AA042_RS00825 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AA042_RS00825 PF12801 4Fe-4S binding domain AA042_RS00825 PF13746 4Fe-4S dicluster domain AA042_RS00830 PF00155 Aminotransferase class I and II AA042_RS00830 PF00392 Bacterial regulatory proteins, gntR family AA042_RS00840 PF00873 AcrB/AcrD/AcrF family AA042_RS00845 PF13533 Biotin-lipoyl like AA042_RS00860 PF02599 Global regulator protein family AA042_RS00875 PF01906 Putative heavy-metal-binding AA042_RS00880 PF11892 Domain of unknown function (DUF3412) AA042_RS00880 PF03641 Possible lysine decarboxylase AA042_RS00880 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AA042_RS00890 PF00182 Chitinase class I AA042_RS00900 PF13404 AsnC-type helix-turn-helix domain AA042_RS00900 PF01037 Lrp/AsnC ligand binding domain AA042_RS00905 PF01053 Cys/Met metabolism PLP-dependent enzyme AA042_RS00910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS00910 PF03466 LysR substrate binding domain AA042_RS00925 PF01470 Pyroglutamyl peptidase AA042_RS00940 PF00067 Cytochrome P450 AA042_RS00950 PF01320 Colicin immunity protein / pyocin immunity protein AA042_RS00995 PF05593 RHS Repeat AA042_RS00995 PF03527 RHS protein AA042_RS00995 PF14220 Domain of unknown function (DUF4329) AA042_RS01000 PF05638 Type VI secretion system effector, Hcp AA042_RS01010 PF01320 Colicin immunity protein / pyocin immunity protein AA042_RS01015 PF09722 Protein of unknown function (DUF2384) AA042_RS01015 PF01936 NYN domain AA042_RS01040 PF01266 FAD dependent oxidoreductase AA042_RS01050 PF03741 Integral membrane protein TerC family AA042_RS01050 PF03471 Transporter associated domain AA042_RS01060 PF03466 LysR substrate binding domain AA042_RS01060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS01065 PF07690 Major Facilitator Superfamily AA042_RS01070 PF00375 Sodium:dicarboxylate symporter family AA042_RS01085 PF08501 Shikimate dehydrogenase substrate binding domain AA042_RS01110 PF03591 AzlC protein AA042_RS01115 PF00210 Ferritin-like domain AA042_RS01125 PF00768 D-alanyl-D-alanine carboxypeptidase AA042_RS01130 PF05230 MASE2 domain AA042_RS01130 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS01135 PF00011 Hsp20/alpha crystallin family AA042_RS01170 PF00749 tRNA synthetases class I (E and Q), catalytic domain AA042_RS01175 PF01566 Natural resistance-associated macrophage protein AA042_RS01180 PF07859 alpha/beta hydrolase fold AA042_RS01235 PF00950 ABC 3 transport family AA042_RS01250 PF04231 Endonuclease I AA042_RS01260 PF03747 ADP-ribosylglycohydrolase AA042_RS01290 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal AA042_RS01290 PF00676 Dehydrogenase E1 component AA042_RS01295 PF02779 Transketolase, pyrimidine binding domain AA042_RS01295 PF02780 Transketolase, C-terminal domain AA042_RS01305 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA042_RS01305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AA042_RS01310 PF03109 ABC1 family AA042_RS01315 PF00860 Permease family AA042_RS01325 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS01360 PF00005 ABC transporter AA042_RS01365 PF00005 ABC transporter AA042_RS01370 PF12911 N-terminal TM domain of oligopeptide transport permease C AA042_RS01370 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS01375 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS01380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AA042_RS01390 PF00392 Bacterial regulatory proteins, gntR family AA042_RS01390 PF00155 Aminotransferase class I and II AA042_RS01395 PF00892 EamA-like transporter family AA042_RS01400 PF03472 Autoinducer binding domain AA042_RS01400 PF00196 Bacterial regulatory proteins, luxR family AA042_RS01430 PF00216 Bacterial DNA-binding protein AA042_RS01435 PF03483 B3/4 domain AA042_RS01435 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AA042_RS01435 PF01588 Putative tRNA binding domain AA042_RS01435 PF03147 Ferredoxin-fold anticodon binding domain AA042_RS01435 PF03484 tRNA synthetase B5 domain AA042_RS01440 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AA042_RS01440 PF01409 tRNA synthetases class II core domain (F) AA042_RS01445 PF00453 Ribosomal protein L20 AA042_RS01450 PF01632 Ribosomal protein L35 AA042_RS01455 PF00707 Translation initiation factor IF-3, C-terminal domain AA042_RS01455 PF05198 Translation initiation factor IF-3, N-terminal domain AA042_RS01460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AA042_RS01460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AA042_RS01460 PF02824 TGS domain AA042_RS01460 PF03129 Anticodon binding domain AA042_RS01475 PF00313 'Cold-shock' DNA-binding domain AA042_RS01495 PF05025 RbsD / FucU transport protein family AA042_RS01500 PF00294 pfkB family carbohydrate kinase AA042_RS01510 PF02653 Branched-chain amino acid transport system / permease component AA042_RS01515 PF00005 ABC transporter AA042_RS01520 PF13407 Periplasmic binding protein domain AA042_RS01525 PF00710 Asparaginase, N-terminal AA042_RS01525 PF17763 Glutaminase/Asparaginase C-terminal domain AA042_RS01530 PF03621 MbtH-like protein AA042_RS01535 PF00202 Aminotransferase class-III AA042_RS01540 PF00324 Amino acid permease AA042_RS01545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS01545 PF08521 Two-component sensor kinase N-terminal AA042_RS01545 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS01560 PF00578 AhpC/TSA family AA042_RS01565 PF13098 Thioredoxin-like domain AA042_RS01575 PF00975 Thioesterase domain AA042_RS01600 PF06865 Pyrimidine/purine nucleoside phosphorylase AA042_RS01610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AA042_RS01610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AA042_RS01610 PF11890 Domain of unknown function (DUF3410) AA042_RS01615 PF01554 MatE AA042_RS01620 PF01206 Sulfurtransferase TusA AA042_RS01625 PF01728 FtsJ-like methyltransferase AA042_RS01625 PF18125 RlmM ferredoxin-like domain AA042_RS01640 PF08447 PAS fold AA042_RS01640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS01650 PF00115 Cytochrome C and Quinol oxidase polypeptide I AA042_RS01665 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AA042_RS01665 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AA042_RS01670 PF00115 Cytochrome C and Quinol oxidase polypeptide I AA042_RS01685 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AA042_RS01685 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AA042_RS01715 PF06969 HemN C-terminal domain AA042_RS01715 PF04055 Radical SAM superfamily AA042_RS01725 PF00027 Cyclic nucleotide-binding domain AA042_RS01725 PF13545 Crp-like helix-turn-helix domain AA042_RS01730 PF00156 Phosphoribosyl transferase domain AA042_RS01735 PF13662 Toprim domain AA042_RS01735 PF02132 RecR protein AA042_RS01740 PF02575 YbaB/EbfC DNA-binding family AA042_RS01745 PF12169 DNA polymerase III subunits gamma and tau domain III AA042_RS01745 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AA042_RS01745 PF12170 DNA polymerase III tau subunit V interacting with alpha AA042_RS01755 PF00563 EAL domain AA042_RS01755 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS01755 PF03707 Bacterial signalling protein N terminal repeat AA042_RS01760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS01760 PF08447 PAS fold AA042_RS01780 PF04354 ZipA, C-terminal FtsZ-binding domain AA042_RS01785 PF02463 RecF/RecN/SMC N terminal domain AA042_RS01795 PF00111 2Fe-2S iron-sulfur cluster binding domain AA042_RS01795 PF01799 [2Fe-2S] binding domain AA042_RS01800 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AA042_RS01800 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AA042_RS01810 PF01979 Amidohydrolase family AA042_RS01815 PF07729 FCD domain AA042_RS01815 PF00392 Bacterial regulatory proteins, gntR family AA042_RS01820 PF03594 Benzoate membrane transport protein AA042_RS01830 PF00107 Zinc-binding dehydrogenase AA042_RS01830 PF16884 N-terminal domain of oxidoreductase AA042_RS01835 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AA042_RS01855 PF02719 Polysaccharide biosynthesis protein AA042_RS01860 PF00953 Glycosyl transferase family 4 AA042_RS01865 PF01370 NAD dependent epimerase/dehydratase family AA042_RS01870 PF00535 Glycosyl transferase family 2 AA042_RS01875 PF00483 Nucleotidyl transferase AA042_RS01875 PF01050 Mannose-6-phosphate isomerase AA042_RS01880 PF00293 NUDIX domain AA042_RS01885 PF01370 NAD dependent epimerase/dehydratase family AA042_RS01890 PF16363 GDP-mannose 4,6 dehydratase AA042_RS01910 PF00535 Glycosyl transferase family 2 AA042_RS01915 PF01943 Polysaccharide biosynthesis protein AA042_RS01920 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AA042_RS01925 PF00551 Formyl transferase AA042_RS01925 PF02911 Formyl transferase, C-terminal domain AA042_RS01930 PF05523 WxcM-like, C-terminal AA042_RS01935 PF00483 Nucleotidyl transferase AA042_RS01945 PF00753 Metallo-beta-lactamase superfamily AA042_RS01945 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AA042_RS01945 PF10996 Beta-Casp domain AA042_RS01950 PF13614 AAA domain AA042_RS01950 PF13807 G-rich domain on putative tyrosine kinase AA042_RS01950 PF02706 Chain length determinant protein AA042_RS01960 PF00216 Bacterial DNA-binding protein AA042_RS01965 PF00575 S1 RNA binding domain AA042_RS01970 PF02224 Cytidylate kinase AA042_RS01975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AA042_RS01980 PF00155 Aminotransferase class I and II AA042_RS01985 PF00800 Prephenate dehydratase AA042_RS01985 PF01817 Chorismate mutase type II AA042_RS01985 PF01842 ACT domain AA042_RS01990 PF00266 Aminotransferase class-V AA042_RS01995 PF00521 DNA gyrase/topoisomerase IV, subunit A AA042_RS01995 PF03989 DNA gyrase C-terminal domain, beta-propeller AA042_RS02000 PF01008 Initiation factor 2 subunit family AA042_RS02005 PF01979 Amidohydrolase family AA042_RS02015 PF13419 Haloacid dehalogenase-like hydrolase AA042_RS02020 PF00106 short chain dehydrogenase AA042_RS02035 PF00005 ABC transporter AA042_RS02035 PF00664 ABC transporter transmembrane region AA042_RS02050 PF01722 BolA-like protein AA042_RS02060 PF00206 Lyase AA042_RS02060 PF10415 Fumarase C C-terminus AA042_RS02065 PF03976 Polyphosphate kinase 2 (PPK2) AA042_RS02070 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AA042_RS02070 PF01266 FAD dependent oxidoreductase AA042_RS02080 PF00733 Asparagine synthase AA042_RS02080 PF13537 Glutamine amidotransferase domain AA042_RS02085 PF08245 Mur ligase middle domain AA042_RS02085 PF02875 Mur ligase family, glutamate ligase domain AA042_RS02085 PF08443 RimK-like ATP-grasp domain AA042_RS02095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AA042_RS02095 PF10414 Sirohaem synthase dimerisation region AA042_RS02095 PF14824 Sirohaem biosynthesis protein central AA042_RS02100 PF02403 Seryl-tRNA synthetase N-terminal domain AA042_RS02100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AA042_RS02105 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AA042_RS02110 PF12002 MgsA AAA+ ATPase C terminal AA042_RS02110 PF16193 AAA C-terminal domain AA042_RS02110 PF00004 ATPase family associated with various cellular activities (AAA) AA042_RS02115 PF03548 Outer membrane lipoprotein carrier protein LolA AA042_RS02120 PF09397 Ftsk gamma domain AA042_RS02120 PF01580 FtsK/SpoIIIE family AA042_RS02120 PF17854 FtsK alpha domain AA042_RS02120 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AA042_RS02125 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AA042_RS02130 PF04376 Arginine-tRNA-protein transferase, N terminus AA042_RS02130 PF04377 Arginine-tRNA-protein transferase, C terminus AA042_RS02135 PF01176 Translation initiation factor 1A / IF-1 AA042_RS02140 PF10431 C-terminal, D2-small domain, of ClpB protein AA042_RS02140 PF07724 AAA domain (Cdc48 subfamily) AA042_RS02140 PF17871 AAA lid domain AA042_RS02140 PF00004 ATPase family associated with various cellular activities (AAA) AA042_RS02140 PF02861 Clp amino terminal domain, pathogenicity island component AA042_RS02145 PF02617 ATP-dependent Clp protease adaptor protein ClpS AA042_RS02150 PF00313 'Cold-shock' DNA-binding domain AA042_RS02155 PF00180 Isocitrate/isopropylmalate dehydrogenase AA042_RS02160 PF03971 Monomeric isocitrate dehydrogenase AA042_RS02165 PF00293 NUDIX domain AA042_RS02175 PF04356 Protein of unknown function (DUF489) AA042_RS02180 PF08328 Adenylosuccinate lyase C-terminal AA042_RS02180 PF00206 Lyase AA042_RS02185 PF08007 Cupin superfamily protein AA042_RS02190 PF13673 Acetyltransferase (GNAT) domain AA042_RS02200 PF00463 Isocitrate lyase family AA042_RS02205 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AA042_RS02210 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AA042_RS02215 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AA042_RS02215 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AA042_RS02225 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AA042_RS02225 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AA042_RS02230 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AA042_RS02230 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AA042_RS02230 PF00384 Molybdopterin oxidoreductase AA042_RS02235 PF00146 NADH dehydrogenase AA042_RS02240 PF12838 4Fe-4S dicluster domain AA042_RS02245 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AA042_RS02250 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AA042_RS02255 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AA042_RS02255 PF00361 Proton-conducting membrane transporter AA042_RS02260 PF00361 Proton-conducting membrane transporter AA042_RS02265 PF00361 Proton-conducting membrane transporter AA042_RS02270 PF00561 alpha/beta hydrolase fold AA042_RS02305 PF00183 Hsp90 protein AA042_RS02305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS02325 PF05525 Branched-chain amino acid transport protein AA042_RS02330 PF00549 CoA-ligase AA042_RS02330 PF02629 CoA binding domain AA042_RS02335 PF00549 CoA-ligase AA042_RS02335 PF08442 ATP-grasp domain AA042_RS02340 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA042_RS02340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AA042_RS02345 PF00364 Biotin-requiring enzyme AA042_RS02345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AA042_RS02345 PF02817 e3 binding domain AA042_RS02350 PF16078 2-oxoglutarate dehydrogenase N-terminus AA042_RS02350 PF00676 Dehydrogenase E1 component AA042_RS02350 PF16870 2-oxoglutarate dehydrogenase C-terminal AA042_RS02350 PF02779 Transketolase, pyrimidine binding domain AA042_RS02355 PF13085 2Fe-2S iron-sulfur cluster binding domain AA042_RS02360 PF02910 Fumarate reductase flavoprotein C-term AA042_RS02360 PF00890 FAD binding domain AA042_RS02365 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AA042_RS02370 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AA042_RS02375 PF00285 Citrate synthase, C-terminal domain AA042_RS02380 PF00474 Sodium:solute symporter family AA042_RS02385 PF04341 Protein of unknown function, DUF485 AA042_RS02390 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AA042_RS02410 PF04333 MlaA lipoprotein AA042_RS02455 PF02753 Pili assembly chaperone PapD, C-terminal domain AA042_RS02455 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AA042_RS02465 PF00419 Fimbrial protein AA042_RS02490 PF03279 Bacterial lipid A biosynthesis acyltransferase AA042_RS02495 PF05209 Septum formation inhibitor MinC, N-terminal domain AA042_RS02495 PF03775 Septum formation inhibitor MinC, C-terminal domain AA042_RS02500 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AA042_RS02505 PF03776 Septum formation topological specificity factor MinE AA042_RS02510 PF00849 RNA pseudouridylate synthase AA042_RS02515 PF02127 Aminopeptidase I zinc metalloprotease (M18) AA042_RS02525 PF00924 Mechanosensitive ion channel AA042_RS02530 PF07702 UTRA domain AA042_RS02530 PF00392 Bacterial regulatory proteins, gntR family AA042_RS02545 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS02555 PF00005 ABC transporter AA042_RS02555 PF08402 TOBE domain AA042_RS02565 PF08659 KR domain AA042_RS02565 PF08240 Alcohol dehydrogenase GroES-like domain AA042_RS02565 PF00550 Phosphopantetheine attachment site AA042_RS02565 PF00698 Acyl transferase domain AA042_RS02565 PF14765 Polyketide synthase dehydratase AA042_RS02570 PF17804 Tail specific protease N-terminal domain AA042_RS02570 PF11818 C-terminal domain of tail specific protease (DUF3340) AA042_RS02570 PF00595 PDZ domain AA042_RS02570 PF03572 Peptidase family S41 AA042_RS02590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AA042_RS02590 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AA042_RS02610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS02610 PF03466 LysR substrate binding domain AA042_RS02635 PF00793 DAHP synthetase I family AA042_RS02640 PF03976 Polyphosphate kinase 2 (PPK2) AA042_RS02655 PF11839 Alanine-zipper, major outer membrane lipoprotein AA042_RS02660 PF03734 L,D-transpeptidase catalytic domain AA042_RS02660 PF17969 L,D-transpeptidase C-terminal domain AA042_RS02670 PF13472 GDSL-like Lipase/Acylhydrolase family AA042_RS02675 PF00005 ABC transporter AA042_RS02685 PF01272 Transcription elongation factor, GreA/GreB, C-term AA042_RS02685 PF03449 Transcription elongation factor, N-terminal AA042_RS02705 PF01464 Transglycosylase SLT domain AA042_RS02705 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA042_RS02710 PF01026 TatD related DNase AA042_RS02715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS02715 PF00672 HAMP domain AA042_RS02745 PF00486 Transcriptional regulatory protein, C terminal AA042_RS02745 PF00072 Response regulator receiver domain AA042_RS02750 PF02702 Osmosensitive K+ channel His kinase sensor domain AA042_RS02750 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS02750 PF13493 Domain of unknown function (DUF4118) AA042_RS02750 PF13492 GAF domain AA042_RS02750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS02755 PF02669 K+-transporting ATPase, c chain AA042_RS02780 PF03692 Putative zinc- or iron-chelating domain AA042_RS02785 PF00881 Nitroreductase family AA042_RS02790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AA042_RS02795 PF05166 YcgL domain AA042_RS02800 PF00570 HRDC domain AA042_RS02800 PF01612 3'-5' exonuclease AA042_RS02805 PF00144 Beta-lactamase AA042_RS02815 PF00120 Glutamine synthetase, catalytic domain AA042_RS02820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AA042_RS02820 PF00205 Thiamine pyrophosphate enzyme, central domain AA042_RS02820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AA042_RS02825 PF03741 Integral membrane protein TerC family AA042_RS02825 PF03471 Transporter associated domain AA042_RS02825 PF00571 CBS domain AA042_RS02835 PF00557 Metallopeptidase family M24 AA042_RS02850 PF03527 RHS protein AA042_RS02850 PF05593 RHS Repeat AA042_RS02850 PF14220 Domain of unknown function (DUF4329) AA042_RS02855 PF05638 Type VI secretion system effector, Hcp AA042_RS02880 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AA042_RS02890 PF01259 SAICAR synthetase AA042_RS02895 PF00753 Metallo-beta-lactamase superfamily AA042_RS02900 PF06804 NlpB/DapX lipoprotein AA042_RS02905 PF00701 Dihydrodipicolinate synthetase family AA042_RS02915 PF00578 AhpC/TSA family AA042_RS02920 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AA042_RS02920 PF14489 QueF-like protein AA042_RS02925 PF00127 Copper binding proteins, plastocyanin/azurin family AA042_RS02930 PF00072 Response regulator receiver domain AA042_RS02930 PF00486 Transcriptional regulatory protein, C terminal AA042_RS02935 PF00672 HAMP domain AA042_RS02935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS02935 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS02940 PF12704 MacB-like periplasmic core domain AA042_RS02940 PF02687 FtsX-like permease family AA042_RS02945 PF00005 ABC transporter AA042_RS02950 PF12704 MacB-like periplasmic core domain AA042_RS02950 PF02687 FtsX-like permease family AA042_RS02960 PF03009 Glycerophosphoryl diester phosphodiesterase family AA042_RS02965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AA042_RS02965 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA042_RS02975 PF07690 Major Facilitator Superfamily AA042_RS02980 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AA042_RS02980 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AA042_RS02990 PF00271 Helicase conserved C-terminal domain AA042_RS02990 PF00176 SNF2 family N-terminal domain AA042_RS02990 PF12419 SNF2 Helicase protein AA042_RS02995 PF01048 Phosphorylase superfamily AA042_RS03000 PF00933 Glycosyl hydrolase family 3 N terminal domain AA042_RS03005 PF00440 Bacterial regulatory proteins, tetR family AA042_RS03010 PF01726 LexA DNA binding domain AA042_RS03010 PF00717 Peptidase S24-like AA042_RS03015 PF03846 Cell division inhibitor SulA AA042_RS03030 PF08272 Topoisomerase I zinc-ribbon-like AA042_RS03030 PF01751 Toprim domain AA042_RS03030 PF01396 Topoisomerase DNA binding C4 zinc finger AA042_RS03030 PF01131 DNA topoisomerase AA042_RS03040 PF00108 Thiolase, N-terminal domain AA042_RS03040 PF02803 Thiolase, C-terminal domain AA042_RS03045 PF00378 Enoyl-CoA hydratase/isomerase AA042_RS03045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AA042_RS03045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AA042_RS03055 PF00582 Universal stress protein family AA042_RS03065 PF14718 Soluble lytic murein transglycosylase L domain AA042_RS03065 PF01464 Transglycosylase SLT domain AA042_RS03085 PF07730 Histidine kinase AA042_RS03085 PF05231 MASE1 AA042_RS03085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS03090 PF00072 Response regulator receiver domain AA042_RS03090 PF00196 Bacterial regulatory proteins, luxR family AA042_RS03095 PF00781 Diacylglycerol kinase catalytic domain AA042_RS03100 PF02397 Bacterial sugar transferase AA042_RS03105 PF01050 Mannose-6-phosphate isomerase AA042_RS03105 PF00483 Nucleotidyl transferase AA042_RS03130 PF00534 Glycosyl transferases group 1 AA042_RS03130 PF13439 Glycosyltransferase Family 4 AA042_RS03150 PF03023 Lipid II flippase MurJ AA042_RS03155 PF00535 Glycosyl transferase family 2 AA042_RS03160 PF00994 Probable molybdopterin binding domain AA042_RS03160 PF03454 MoeA C-terminal region (domain IV) AA042_RS03160 PF03453 MoeA N-terminal region (domain I and II) AA042_RS03165 PF00994 Probable molybdopterin binding domain AA042_RS03170 PF12804 MobA-like NTP transferase domain AA042_RS03180 PF00849 RNA pseudouridylate synthase AA042_RS03195 PF01757 Acyltransferase family AA042_RS03200 PF02254 TrkA-N domain AA042_RS03200 PF02080 TrkA-C domain AA042_RS03200 PF00999 Sodium/hydrogen exchanger family AA042_RS03220 PF01966 HD domain AA042_RS03225 PF00072 Response regulator receiver domain AA042_RS03225 PF00196 Bacterial regulatory proteins, luxR family AA042_RS03240 PF13185 GAF domain AA042_RS03250 PF00672 HAMP domain AA042_RS03250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA042_RS03250 PF00072 Response regulator receiver domain AA042_RS03250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS03250 PF01627 Hpt domain AA042_RS03250 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS03255 PF00255 Glutathione peroxidase AA042_RS03260 PF01641 SelR domain AA042_RS03265 PF00155 Aminotransferase class I and II AA042_RS03270 PF01435 Peptidase family M48 AA042_RS03275 PF05724 Thiopurine S-methyltransferase (TPMT) AA042_RS03285 PF03880 DbpA RNA binding domain AA042_RS03285 PF00271 Helicase conserved C-terminal domain AA042_RS03285 PF00270 DEAD/DEAH box helicase AA042_RS03300 PF01474 Class-II DAHP synthetase family AA042_RS03310 PF03466 LysR substrate binding domain AA042_RS03310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS03320 PF09285 Elongation factor P, C-terminal AA042_RS03320 PF08207 Elongation factor P (EF-P) KOW-like domain AA042_RS03320 PF01132 Elongation factor P (EF-P) OB domain AA042_RS03335 PF03449 Transcription elongation factor, N-terminal AA042_RS03335 PF01272 Transcription elongation factor, GreA/GreB, C-term AA042_RS03350 PF07690 Major Facilitator Superfamily AA042_RS03385 PF02770 Acyl-CoA dehydrogenase, middle domain AA042_RS03385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS03385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS03405 PF01553 Acyltransferase AA042_RS03410 PF01544 CorA-like Mg2+ transporter protein AA042_RS03415 PF02540 NAD synthase AA042_RS03415 PF00117 Glutamine amidotransferase class-I AA042_RS03415 PF00958 GMP synthase C terminal domain AA042_RS03435 PF01852 START domain AA042_RS03440 PF03692 Putative zinc- or iron-chelating domain AA042_RS03455 PF00691 OmpA family AA042_RS03455 PF05736 OprF membrane domain AA042_RS03470 PF00766 Electron transfer flavoprotein FAD-binding domain AA042_RS03470 PF01012 Electron transfer flavoprotein domain AA042_RS03475 PF01012 Electron transfer flavoprotein domain AA042_RS03485 PF12833 Helix-turn-helix domain AA042_RS03485 PF06719 AraC-type transcriptional regulator N-terminus AA042_RS03490 PF00107 Zinc-binding dehydrogenase AA042_RS03490 PF08240 Alcohol dehydrogenase GroES-like domain AA042_RS03505 PF06463 Molybdenum Cofactor Synthesis C AA042_RS03505 PF04055 Radical SAM superfamily AA042_RS03510 PF00440 Bacterial regulatory proteins, tetR family AA042_RS03515 PF01026 TatD related DNase AA042_RS03520 PF09115 DNA polymerase III, delta subunit, C terminal AA042_RS03525 PF02223 Thymidylate kinase AA042_RS03530 PF02618 YceG-like family AA042_RS03535 PF01063 Amino-transferase class IV AA042_RS03540 PF02801 Beta-ketoacyl synthase, C-terminal domain AA042_RS03540 PF00109 Beta-ketoacyl synthase, N-terminal domain AA042_RS03545 PF00550 Phosphopantetheine attachment site AA042_RS03555 PF00698 Acyl transferase domain AA042_RS03560 PF02504 Fatty acid synthesis protein AA042_RS03565 PF01783 Ribosomal L32p protein family AA042_RS03570 PF02620 Large ribosomal RNA subunit accumulation protein YceD AA042_RS03575 PF02545 Maf-like protein AA042_RS03580 PF01343 Peptidase family S49 AA042_RS03580 PF06965 Na+/H+ antiporter 1 AA042_RS03585 PF13419 Haloacid dehalogenase-like hydrolase AA042_RS03590 PF00849 RNA pseudouridylate synthase AA042_RS03590 PF01479 S4 domain AA042_RS03595 PF00575 S1 RNA binding domain AA042_RS03595 PF10150 Ribonuclease E/G family AA042_RS03595 PF12111 Polyribonucleotide phosphorylase C terminal AA042_RS03605 PF01565 FAD binding domain AA042_RS03605 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AA042_RS03610 PF01451 Low molecular weight phosphotyrosine protein phosphatase AA042_RS03620 PF03966 Trm112p-like protein AA042_RS03625 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AA042_RS03635 PF01618 MotA/TolQ/ExbB proton channel family AA042_RS03640 PF00753 Metallo-beta-lactamase superfamily AA042_RS03640 PF03772 Competence protein AA042_RS03650 PF01061 ABC-2 type transporter AA042_RS03655 PF00005 ABC transporter AA042_RS03660 PF00043 Glutathione S-transferase, C-terminal domain AA042_RS03660 PF13417 Glutathione S-transferase, N-terminal domain AA042_RS03665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS03665 PF09317 Domain of unknown function (DUF1974) AA042_RS03665 PF02770 Acyl-CoA dehydrogenase, middle domain AA042_RS03665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS03675 PF03466 LysR substrate binding domain AA042_RS03675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS03680 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AA042_RS03680 PF02272 DHHA1 domain AA042_RS03680 PF01411 tRNA synthetases class II (A) AA042_RS03690 PF00571 CBS domain AA042_RS03690 PF00005 ABC transporter AA042_RS03695 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS03740 PF04320 Protein with unknown function (DUF469) AA042_RS03745 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AA042_RS03750 PF10672 S-adenosylmethionine-dependent methyltransferase AA042_RS03750 PF01170 Putative RNA methylase family UPF0020 AA042_RS03750 PF02926 THUMP domain AA042_RS03760 PF04957 Ribosome modulation factor AA042_RS03765 PF01180 Dihydroorotate dehydrogenase AA042_RS03770 PF05736 OprF membrane domain AA042_RS03770 PF00691 OmpA family AA042_RS03780 PF00924 Mechanosensitive ion channel AA042_RS03780 PF05552 Conserved TM helix AA042_RS03790 PF01544 CorA-like Mg2+ transporter protein AA042_RS03795 PF03737 Aldolase/RraA AA042_RS03805 PF00391 PEP-utilising enzyme, mobile domain AA042_RS03805 PF02896 PEP-utilising enzyme, TIM barrel domain AA042_RS03805 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AA042_RS03810 PF03618 Kinase/pyrophosphorylase AA042_RS03815 PF03972 MmgE/PrpD family AA042_RS03820 PF04303 PrpF protein AA042_RS03825 PF00330 Aconitase family (aconitate hydratase) AA042_RS03825 PF00694 Aconitase C-terminal domain AA042_RS03830 PF00285 Citrate synthase, C-terminal domain AA042_RS03840 PF00392 Bacterial regulatory proteins, gntR family AA042_RS03840 PF07729 FCD domain AA042_RS03845 PF08443 RimK-like ATP-grasp domain AA042_RS03845 PF18030 RimK PreATP-grasp domain AA042_RS03865 PF01507 Phosphoadenosine phosphosulfate reductase family AA042_RS03870 PF04542 Sigma-70 region 2 AA042_RS03870 PF08281 Sigma-70, region 4 AA042_RS03880 PF00593 TonB dependent receptor AA042_RS03880 PF07660 Secretin and TonB N terminus short domain AA042_RS03880 PF07715 TonB-dependent Receptor Plug Domain AA042_RS03905 PF04381 Putative exonuclease, RdgC AA042_RS03910 PF00893 Small Multidrug Resistance protein AA042_RS03915 PF07690 Major Facilitator Superfamily AA042_RS03925 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS03925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS03930 PF02646 RmuC family AA042_RS03950 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AA042_RS03955 PF00255 Glutathione peroxidase AA042_RS03970 PF02654 Cobalamin-5-phosphate synthase AA042_RS03980 PF02277 Phosphoribosyltransferase AA042_RS03985 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AA042_RS03990 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AA042_RS03990 PF07685 CobB/CobQ-like glutamine amidotransferase domain AA042_RS03995 PF00155 Aminotransferase class I and II AA042_RS04000 PF03186 CobD/Cbib protein AA042_RS04000 PF17113 Regulatory signalling modulator protein AmpE AA042_RS04005 PF00881 Nitroreductase family AA042_RS04010 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AA042_RS04010 PF07685 CobB/CobQ-like glutamine amidotransferase domain AA042_RS04015 PF12557 Cob(I)alamin adenosyltransferase N terminal AA042_RS04015 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AA042_RS04020 PF07995 Glucose / Sorbosone dehydrogenase AA042_RS04025 PF00877 NlpC/P60 family AA042_RS04030 PF00877 NlpC/P60 family AA042_RS04035 PF00308 Bacterial dnaA protein AA042_RS04040 PF01594 AI-2E family transporter AA042_RS04050 PF00586 AIR synthase related protein, N-terminal domain AA042_RS04050 PF02769 AIR synthase related protein, C-terminal domain AA042_RS04055 PF00551 Formyl transferase AA042_RS04070 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AA042_RS04075 PF03819 MazG nucleotide pyrophosphohydrolase domain AA042_RS04080 PF13291 ACT domain AA042_RS04080 PF04607 Region found in RelA / SpoT proteins AA042_RS04080 PF02824 TGS domain AA042_RS04085 PF05958 tRNA (Uracil-5-)-methyltransferase AA042_RS04090 PF00291 Pyridoxal-phosphate dependent enzyme AA042_RS04095 PF16750 Sensor domain of 2-component histidine kinase AA042_RS04095 PF00672 HAMP domain AA042_RS04095 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS04095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS04100 PF00072 Response regulator receiver domain AA042_RS04100 PF00486 Transcriptional regulatory protein, C terminal AA042_RS04105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS04105 PF00672 HAMP domain AA042_RS04105 PF00072 Response regulator receiver domain AA042_RS04105 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA042_RS04105 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS04105 PF01627 Hpt domain AA042_RS04110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AA042_RS04110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AA042_RS04125 PF08534 Redoxin AA042_RS04130 PF03960 ArsC family AA042_RS04135 PF03358 NADPH-dependent FMN reductase AA042_RS04145 PF03352 Methyladenine glycosylase AA042_RS04150 PF01171 PP-loop family AA042_RS04155 PF04893 Yip1 domain AA042_RS04160 PF17283 SprT-like zinc ribbon domain AA042_RS04160 PF10263 SprT-like family AA042_RS04200 PF05593 RHS Repeat AA042_RS04200 PF14220 Domain of unknown function (DUF4329) AA042_RS04200 PF03527 RHS protein AA042_RS04205 PF05638 Type VI secretion system effector, Hcp AA042_RS04215 PF00375 Sodium:dicarboxylate symporter family AA042_RS04220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS04220 PF08918 PhoQ Sensor AA042_RS04225 PF00486 Transcriptional regulatory protein, C terminal AA042_RS04225 PF00072 Response regulator receiver domain AA042_RS04250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS04250 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS04255 PF00158 Sigma-54 interaction domain AA042_RS04255 PF00072 Response regulator receiver domain AA042_RS04255 PF02954 Bacterial regulatory protein, Fis family AA042_RS04260 PF00083 Sugar (and other) transporter AA042_RS04295 PF12833 Helix-turn-helix domain AA042_RS04295 PF06719 AraC-type transcriptional regulator N-terminus AA042_RS04300 PF13460 NAD(P)H-binding AA042_RS04310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS04310 PF03466 LysR substrate binding domain AA042_RS04315 PF07690 Major Facilitator Superfamily AA042_RS04325 PF08338 Domain of unknown function (DUF1731) AA042_RS04325 PF01370 NAD dependent epimerase/dehydratase family AA042_RS04330 PF03466 LysR substrate binding domain AA042_RS04330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS04340 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AA042_RS04340 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AA042_RS04345 PF03707 Bacterial signalling protein N terminal repeat AA042_RS04345 PF00563 EAL domain AA042_RS04345 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS04385 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS04385 PF08521 Two-component sensor kinase N-terminal AA042_RS04385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS04390 PF00486 Transcriptional regulatory protein, C terminal AA042_RS04390 PF00072 Response regulator receiver domain AA042_RS04395 PF00884 Sulfatase AA042_RS04405 PF01348 Type II intron maturase AA042_RS04405 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AA042_RS04410 PF00118 TCP-1/cpn60 chaperonin family AA042_RS04415 PF00166 Chaperonin 10 Kd subunit AA042_RS04420 PF04186 FxsA cytoplasmic membrane protein AA042_RS04440 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AA042_RS04445 PF07690 Major Facilitator Superfamily AA042_RS04450 PF04073 Aminoacyl-tRNA editing domain AA042_RS04450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AA042_RS04450 PF03129 Anticodon binding domain AA042_RS04460 PF11798 IMS family HHH motif AA042_RS04460 PF00817 impB/mucB/samB family AA042_RS04480 PF09924 Uncharacterised conserved protein (DUF2156) AA042_RS04480 PF03706 Lysylphosphatidylglycerol synthase TM region AA042_RS04490 PF02705 K+ potassium transporter AA042_RS04500 PF00919 Uncharacterized protein family UPF0004 AA042_RS04500 PF18693 TRAM domain AA042_RS04500 PF04055 Radical SAM superfamily AA042_RS04505 PF13302 Acetyltransferase (GNAT) domain AA042_RS04505 PF13673 Acetyltransferase (GNAT) domain AA042_RS04505 PF03352 Methyladenine glycosylase AA042_RS04505 PF00117 Glutamine amidotransferase class-I AA042_RS04505 PF00958 GMP synthase C terminal domain AA042_RS04510 PF00849 RNA pseudouridylate synthase AA042_RS04510 PF01479 S4 domain AA042_RS04515 PF07308 Protein of unknown function (DUF1456) AA042_RS04520 PF01980 tRNA-methyltransferase O AA042_RS04520 PF18389 TrmO C-terminal domain AA042_RS04525 PF00970 Oxidoreductase FAD-binding domain AA042_RS04525 PF00175 Oxidoreductase NAD-binding domain AA042_RS04530 PF03466 LysR substrate binding domain AA042_RS04530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS04535 PF01219 Prokaryotic diacylglycerol kinase AA042_RS04540 PF00196 Bacterial regulatory proteins, luxR family AA042_RS04540 PF00072 Response regulator receiver domain AA042_RS04555 PF03641 Possible lysine decarboxylase AA042_RS04560 PF02631 RecX family AA042_RS04565 PF00154 recA bacterial DNA recombination protein AA042_RS04570 PF02464 Competence-damaged protein AA042_RS04580 PF00717 Peptidase S24-like AA042_RS04580 PF01381 Helix-turn-helix AA042_RS04585 PF01624 MutS domain I AA042_RS04585 PF05188 MutS domain II AA042_RS04585 PF05192 MutS domain III AA042_RS04585 PF00488 MutS domain V AA042_RS04585 PF05190 MutS family domain IV AA042_RS04590 PF11953 Domain of unknown function (DUF3470) AA042_RS04590 PF00037 4Fe-4S binding domain AA042_RS04595 PF01144 Coenzyme A transferase AA042_RS04600 PF01144 Coenzyme A transferase AA042_RS04605 PF08361 MAATS-type transcriptional repressor, C-terminal region AA042_RS04605 PF00440 Bacterial regulatory proteins, tetR family AA042_RS04610 PF00529 HlyD membrane-fusion protein of T1SS AA042_RS04610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AA042_RS04615 PF00873 AcrB/AcrD/AcrF family AA042_RS04620 PF02321 Outer membrane efflux protein AA042_RS04630 PF01384 Phosphate transporter family AA042_RS04640 PF12137 RNA polymerase recycling family C-terminal AA042_RS04640 PF00271 Helicase conserved C-terminal domain AA042_RS04640 PF00176 SNF2 family N-terminal domain AA042_RS04640 PF18339 RapA N-terminal Tudor like domain 1 AA042_RS04640 PF18337 RapA N-terminal Tudor like domain AA042_RS04645 PF00563 EAL domain AA042_RS04645 PF03707 Bacterial signalling protein N terminal repeat AA042_RS04645 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS04660 PF13458 Periplasmic binding protein AA042_RS04665 PF02653 Branched-chain amino acid transport system / permease component AA042_RS04670 PF02653 Branched-chain amino acid transport system / permease component AA042_RS04670 PF11862 Domain of unknown function (DUF3382) AA042_RS04675 PF12399 Branched-chain amino acid ATP-binding cassette transporter AA042_RS04675 PF00005 ABC transporter AA042_RS04680 PF00005 ABC transporter AA042_RS04710 PF05114 Protein of unknown function (DUF692) AA042_RS04725 PF03466 LysR substrate binding domain AA042_RS04725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS04745 PF06965 Na+/H+ antiporter 1 AA042_RS04750 PF05433 Glycine zipper 2TM domain AA042_RS04760 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AA042_RS04760 PF01243 Pyridoxamine 5'-phosphate oxidase AA042_RS04765 PF00691 OmpA family AA042_RS04765 PF04972 BON domain AA042_RS04770 PF00144 Beta-lactamase AA042_RS04775 PF02449 Beta-galactosidase AA042_RS04775 PF17992 Agarase CBM like domain AA042_RS04780 PF13307 Helicase C-terminal domain AA042_RS04780 PF06733 DEAD_2 AA042_RS04805 PF02810 SEC-C motif AA042_RS04815 PF07516 SecA Wing and Scaffold domain AA042_RS04815 PF01043 SecA preprotein cross-linking domain AA042_RS04815 PF07517 SecA DEAD-like domain AA042_RS04815 PF02810 SEC-C motif AA042_RS04820 PF00043 Glutathione S-transferase, C-terminal domain AA042_RS04820 PF02798 Glutathione S-transferase, N-terminal domain AA042_RS04825 PF01804 Penicillin amidase AA042_RS04835 PF04679 ATP dependent DNA ligase C terminal region AA042_RS04835 PF01068 ATP dependent DNA ligase domain AA042_RS04835 PF04675 DNA ligase N terminus AA042_RS04845 PF00270 DEAD/DEAH box helicase AA042_RS04845 PF08494 DEAD/H associated AA042_RS04845 PF00271 Helicase conserved C-terminal domain AA042_RS04860 PF00692 dUTPase AA042_RS04865 PF00313 'Cold-shock' DNA-binding domain AA042_RS04870 PF10609 NUBPL iron-transfer P-loop NTPase AA042_RS04875 PF09334 tRNA synthetases class I (M) AA042_RS04875 PF01588 Putative tRNA binding domain AA042_RS04880 PF04060 Putative Fe-S cluster AA042_RS04885 PF00633 Helix-hairpin-helix motif AA042_RS04885 PF10576 Iron-sulfur binding domain of endonuclease III AA042_RS04885 PF00730 HhH-GPD superfamily base excision DNA repair protein AA042_RS04895 PF00196 Bacterial regulatory proteins, luxR family AA042_RS04895 PF00072 Response regulator receiver domain AA042_RS04905 PF00764 Arginosuccinate synthase AA042_RS04915 PF01979 Amidohydrolase family AA042_RS04920 PF00929 Exonuclease AA042_RS04925 PF00578 AhpC/TSA family AA042_RS04925 PF10417 C-terminal domain of 1-Cys peroxiredoxin AA042_RS04930 PF04324 BFD-like [2Fe-2S] binding domain AA042_RS04935 PF00210 Ferritin-like domain AA042_RS04940 PF00462 Glutaredoxin AA042_RS04945 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AA042_RS04945 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AA042_RS04955 PF04073 Aminoacyl-tRNA editing domain AA042_RS04960 PF00230 Major intrinsic protein AA042_RS04965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AA042_RS04965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AA042_RS04970 PF00455 DeoR C terminal sensor domain AA042_RS04970 PF08220 DeoR-like helix-turn-helix domain AA042_RS04975 PF01266 FAD dependent oxidoreductase AA042_RS04975 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AA042_RS04980 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA042_RS04990 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS04995 PF00005 ABC transporter AA042_RS05000 PF02743 Cache domain AA042_RS05000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS05000 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS05005 PF00158 Sigma-54 interaction domain AA042_RS05005 PF00072 Response regulator receiver domain AA042_RS05005 PF02954 Bacterial regulatory protein, Fis family AA042_RS05010 PF06942 GlpM protein AA042_RS05025 PF00892 EamA-like transporter family AA042_RS05040 PF00202 Aminotransferase class-III AA042_RS05055 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS05055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS05060 PF00158 Sigma-54 interaction domain AA042_RS05060 PF00072 Response regulator receiver domain AA042_RS05060 PF02954 Bacterial regulatory protein, Fis family AA042_RS05065 PF01717 Cobalamin-independent synthase, Catalytic domain AA042_RS05065 PF08267 Cobalamin-independent synthase, N-terminal domain AA042_RS05070 PF03466 LysR substrate binding domain AA042_RS05070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS05080 PF01810 LysE type translocator AA042_RS05085 PF00293 NUDIX domain AA042_RS05090 PF01645 Conserved region in glutamate synthase AA042_RS05105 PF00324 Amino acid permease AA042_RS05115 PF03551 Transcriptional regulator PadR-like family AA042_RS05120 PF04954 Siderophore-interacting protein AA042_RS05120 PF08021 Siderophore-interacting FAD-binding domain AA042_RS05130 PF09905 DNA-binding protein VF530 AA042_RS05135 PF07715 TonB-dependent Receptor Plug Domain AA042_RS05135 PF00593 TonB dependent receptor AA042_RS05145 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AA042_RS05150 PF04966 Carbohydrate-selective porin, OprB family AA042_RS05155 PF01011 PQQ enzyme repeat AA042_RS05165 PF00563 EAL domain AA042_RS05165 PF03707 Bacterial signalling protein N terminal repeat AA042_RS05165 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS05170 PF02190 ATP-dependent protease La (LON) substrate-binding domain AA042_RS05170 PF00004 ATPase family associated with various cellular activities (AAA) AA042_RS05170 PF05362 Lon protease (S16) C-terminal proteolytic domain AA042_RS05195 PF13649 Methyltransferase domain AA042_RS05205 PF14437 MafB19-like deaminase AA042_RS05210 PF07732 Multicopper oxidase AA042_RS05210 PF07731 Multicopper oxidase AA042_RS05210 PF00394 Multicopper oxidase AA042_RS05225 PF02264 LamB porin AA042_RS05230 PF16657 Maltogenic Amylase, C-terminal domain AA042_RS05230 PF00128 Alpha amylase, catalytic domain AA042_RS05235 PF02378 Phosphotransferase system, EIIC AA042_RS05235 PF00367 phosphotransferase system, EIIB AA042_RS05240 PF00392 Bacterial regulatory proteins, gntR family AA042_RS05240 PF07702 UTRA domain AA042_RS05255 PF01070 FMN-dependent dehydrogenase AA042_RS05260 PF03466 LysR substrate binding domain AA042_RS05260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS05265 PF04851 Type III restriction enzyme, res subunit AA042_RS05265 PF00271 Helicase conserved C-terminal domain AA042_RS05265 PF08463 EcoEI R protein C-terminal AA042_RS05265 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AA042_RS05310 PF13356 Arm DNA-binding domain AA042_RS05310 PF00589 Phage integrase family AA042_RS05315 PF00958 GMP synthase C terminal domain AA042_RS05315 PF02540 NAD synthase AA042_RS05315 PF00117 Glutamine amidotransferase class-I AA042_RS05320 PF00571 CBS domain AA042_RS05320 PF00478 IMP dehydrogenase / GMP reductase domain AA042_RS05335 PF02601 Exonuclease VII, large subunit AA042_RS05335 PF13742 OB-fold nucleic acid binding domain AA042_RS05340 PF01551 Peptidase family M23 AA042_RS05340 PF01476 LysM domain AA042_RS05340 PF08525 Opacity-associated protein A N-terminal motif AA042_RS05345 PF00682 HMGL-like AA042_RS05345 PF08502 LeuA allosteric (dimerisation) domain AA042_RS05350 PF00795 Carbon-nitrogen hydrolase AA042_RS05355 PF00155 Aminotransferase class I and II AA042_RS05360 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AA042_RS05360 PF01926 50S ribosome-binding GTPase AA042_RS05365 PF13360 PQQ-like domain AA042_RS05375 PF03129 Anticodon binding domain AA042_RS05375 PF13393 Histidyl-tRNA synthetase AA042_RS05380 PF04551 GcpE protein AA042_RS05385 PF13464 Domain of unknown function (DUF4115) AA042_RS05395 PF04055 Radical SAM superfamily AA042_RS05400 PF00334 Nucleoside diphosphate kinase AA042_RS05405 PF04384 Iron-sulphur cluster assembly AA042_RS05410 PF00111 2Fe-2S iron-sulfur cluster binding domain AA042_RS05415 PF00012 Hsp70 protein AA042_RS05420 PF00226 DnaJ domain AA042_RS05420 PF07743 HSCB C-terminal oligomerisation domain AA042_RS05425 PF01521 Iron-sulphur cluster biosynthesis AA042_RS05430 PF01592 NifU-like N terminal domain AA042_RS05435 PF00266 Aminotransferase class-V AA042_RS05440 PF02082 Transcriptional regulator AA042_RS05445 PF00132 Bacterial transferase hexapeptide (six repeats) AA042_RS05450 PF00588 SpoU rRNA Methylase family AA042_RS05455 PF00459 Inositol monophosphatase family AA042_RS05460 PF05433 Glycine zipper 2TM domain AA042_RS05465 PF07549 SecD/SecF GG Motif AA042_RS05465 PF02355 Protein export membrane protein AA042_RS05470 PF13721 SecD export protein N-terminal TM region AA042_RS05470 PF07549 SecD/SecF GG Motif AA042_RS05470 PF02355 Protein export membrane protein AA042_RS05475 PF02699 Preprotein translocase subunit AA042_RS05480 PF01702 Queuine tRNA-ribosyltransferase AA042_RS05485 PF02547 Queuosine biosynthesis protein AA042_RS05500 PF00034 Cytochrome c AA042_RS05515 PF00593 TonB dependent receptor AA042_RS05515 PF07660 Secretin and TonB N terminus short domain AA042_RS05515 PF07715 TonB-dependent Receptor Plug Domain AA042_RS05525 PF13404 AsnC-type helix-turn-helix domain AA042_RS05525 PF01037 Lrp/AsnC ligand binding domain AA042_RS05535 PF00551 Formyl transferase AA042_RS05535 PF02911 Formyl transferase, C-terminal domain AA042_RS05540 PF14849 YidC periplasmic domain AA042_RS05540 PF02096 60Kd inner membrane protein AA042_RS05555 PF00483 Nucleotidyl transferase AA042_RS05560 PF00117 Glutamine amidotransferase class-I AA042_RS05565 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AA042_RS05565 PF00391 PEP-utilising enzyme, mobile domain AA042_RS05575 PF13416 Bacterial extracellular solute-binding protein AA042_RS05580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS05580 PF00672 HAMP domain AA042_RS05580 PF12729 Four helix bundle sensory module for signal transduction AA042_RS05585 PF01040 UbiA prenyltransferase family AA042_RS05590 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AA042_RS05595 PF00510 Cytochrome c oxidase subunit III AA042_RS05600 PF00115 Cytochrome C and Quinol oxidase polypeptide I AA042_RS05605 PF06481 COX Aromatic Rich Motif AA042_RS05605 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AA042_RS05610 PF02600 Disulfide bond formation protein DsbB AA042_RS05615 PF00970 Oxidoreductase FAD-binding domain AA042_RS05615 PF00042 Globin AA042_RS05615 PF00175 Oxidoreductase NAD-binding domain AA042_RS05620 PF01590 GAF domain AA042_RS05620 PF00158 Sigma-54 interaction domain AA042_RS05625 PF00072 Response regulator receiver domain AA042_RS05625 PF01584 CheW-like domain AA042_RS05635 PF12729 Four helix bundle sensory module for signal transduction AA042_RS05635 PF00672 HAMP domain AA042_RS05635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS05665 PF03573 outer membrane porin, OprD family AA042_RS05670 PF01590 GAF domain AA042_RS05670 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS05670 PF00360 Phytochrome region AA042_RS05670 PF00563 EAL domain AA042_RS05675 PF00360 Phytochrome region AA042_RS05675 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS05675 PF01590 GAF domain AA042_RS05675 PF00563 EAL domain AA042_RS05680 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AA042_RS05685 PF00091 Tubulin/FtsZ family, GTPase domain AA042_RS05685 PF12327 FtsZ family, C-terminal domain AA042_RS05690 PF02491 SHS2 domain inserted in FTSA AA042_RS05695 PF03799 Cell division protein FtsQ AA042_RS05695 PF08478 POTRA domain, FtsQ-type AA042_RS05700 PF01820 D-ala D-ala ligase N-terminus AA042_RS05700 PF07478 D-ala D-ala ligase C-terminus AA042_RS05705 PF01225 Mur ligase family, catalytic domain AA042_RS05705 PF08245 Mur ligase middle domain AA042_RS05705 PF02875 Mur ligase family, glutamate ligase domain AA042_RS05710 PF04101 Glycosyltransferase family 28 C-terminal domain AA042_RS05710 PF03033 Glycosyltransferase family 28 N-terminal domain AA042_RS05720 PF02875 Mur ligase family, glutamate ligase domain AA042_RS05720 PF08245 Mur ligase middle domain AA042_RS05730 PF02875 Mur ligase family, glutamate ligase domain AA042_RS05730 PF08245 Mur ligase middle domain AA042_RS05730 PF01225 Mur ligase family, catalytic domain AA042_RS05735 PF08245 Mur ligase middle domain AA042_RS05735 PF02875 Mur ligase family, glutamate ligase domain AA042_RS05735 PF01225 Mur ligase family, catalytic domain AA042_RS05740 PF03717 Penicillin-binding Protein dimerisation domain AA042_RS05740 PF00905 Penicillin binding protein transpeptidase domain AA042_RS05745 PF04999 Cell division protein FtsL AA042_RS05750 PF01795 MraW methylase family AA042_RS05755 PF02381 MraZ protein, putative antitoxin-like AA042_RS05765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AA042_RS05770 PF04348 LppC putative lipoprotein AA042_RS05775 PF02021 Uncharacterised protein family UPF0102 AA042_RS05780 PF13580 SIS domain AA042_RS05785 PF04972 BON domain AA042_RS05790 PF04386 Stringent starvation protein B AA042_RS05795 PF00043 Glutathione S-transferase, C-terminal domain AA042_RS05795 PF02798 Glutathione S-transferase, N-terminal domain AA042_RS05800 PF02167 Cytochrome C1 family AA042_RS05805 PF00033 Cytochrome b/b6/petB AA042_RS05805 PF00032 Cytochrome b(C-terminal)/b6/petD AA042_RS05815 PF00380 Ribosomal protein S9/S16 AA042_RS05820 PF00572 Ribosomal protein L13 AA042_RS05825 PF00248 Aldo/keto reductase family AA042_RS05835 PF03969 AFG1-like ATPase AA042_RS05840 PF00579 tRNA synthetases class I (W and Y) AA042_RS05855 PF13488 Glycine zipper AA042_RS05855 PF00691 OmpA family AA042_RS05860 PF00753 Metallo-beta-lactamase superfamily AA042_RS05870 PF13193 AMP-binding enzyme C-terminal domain AA042_RS05870 PF00501 AMP-binding enzyme AA042_RS05875 PF01810 LysE type translocator AA042_RS05880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AA042_RS05880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AA042_RS05885 PF08468 Methyltransferase small domain N-terminal AA042_RS05885 PF05175 Methyltransferase small domain AA042_RS05890 PF01169 Uncharacterized protein family UPF0016 AA042_RS05895 PF01435 Peptidase family M48 AA042_RS05900 PF02586 SOS response associated peptidase (SRAP) AA042_RS05935 PF06039 Malate:quinone oxidoreductase (Mqo) AA042_RS05960 PF02954 Bacterial regulatory protein, Fis family AA042_RS05960 PF00072 Response regulator receiver domain AA042_RS05965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS05965 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS05965 PF00989 PAS fold AA042_RS05975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AA042_RS05980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AA042_RS05985 PF03573 outer membrane porin, OprD family AA042_RS05990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AA042_RS05995 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS06000 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS06000 PF12911 N-terminal TM domain of oligopeptide transport permease C AA042_RS06005 PF00005 ABC transporter AA042_RS06005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AA042_RS06025 PF03144 Elongation factor Tu domain 2 AA042_RS06025 PF00009 Elongation factor Tu GTP binding domain AA042_RS06025 PF16658 Class II release factor RF3, C-terminal domain AA042_RS06030 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS06035 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AA042_RS06040 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS06045 PF00005 ABC transporter AA042_RS06045 PF00571 CBS domain AA042_RS06050 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AA042_RS06050 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AA042_RS06080 PF18331 PKHD-type hydroxylase C-terminal domain AA042_RS06080 PF13640 2OG-Fe(II) oxygenase superfamily AA042_RS06085 PF07715 TonB-dependent Receptor Plug Domain AA042_RS06085 PF00593 TonB dependent receptor AA042_RS06090 PF00175 Oxidoreductase NAD-binding domain AA042_RS06090 PF00258 Flavodoxin AA042_RS06090 PF00667 FAD binding domain AA042_RS06105 PF00294 pfkB family carbohydrate kinase AA042_RS06115 PF00356 Bacterial regulatory proteins, lacI family AA042_RS06115 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AA042_RS06120 PF01026 TatD related DNase AA042_RS06130 PF01510 N-acetylmuramoyl-L-alanine amidase AA042_RS06140 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AA042_RS06140 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AA042_RS06145 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AA042_RS06145 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AA042_RS06150 PF00730 HhH-GPD superfamily base excision DNA repair protein AA042_RS06150 PF06029 AlkA N-terminal domain AA042_RS06150 PF02805 Metal binding domain of Ada AA042_RS06150 PF12833 Helix-turn-helix domain AA042_RS06200 PF02899 Phage integrase, N-terminal SAM-like domain AA042_RS06200 PF00589 Phage integrase family AA042_RS06220 PF13356 Arm DNA-binding domain AA042_RS06220 PF14659 Phage integrase, N-terminal SAM-like domain AA042_RS06220 PF00589 Phage integrase family AA042_RS06230 PF07963 Prokaryotic N-terminal methylation motif AA042_RS06230 PF00114 Pilin (bacterial filament) AA042_RS06235 PF00482 Type II secretion system (T2SS), protein F AA042_RS06240 PF06750 Bacterial Peptidase A24 N-terminal domain AA042_RS06240 PF01478 Type IV leader peptidase family AA042_RS06245 PF01121 Dephospho-CoA kinase AA042_RS06250 PF03884 DNA gyrase inhibitor YacG AA042_RS06275 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA042_RS06280 PF00282 Pyridoxal-dependent decarboxylase conserved domain AA042_RS06285 PF04960 Glutaminase AA042_RS06290 PF13520 Amino acid permease AA042_RS06315 PF07724 AAA domain (Cdc48 subfamily) AA042_RS06315 PF10431 C-terminal, D2-small domain, of ClpB protein AA042_RS06315 PF02861 Clp amino terminal domain, pathogenicity island component AA042_RS06315 PF17871 AAA lid domain AA042_RS06315 PF00004 ATPase family associated with various cellular activities (AAA) AA042_RS06330 PF13525 Outer membrane lipoprotein AA042_RS06340 PF01266 FAD dependent oxidoreductase AA042_RS06345 PF00114 Pilin (bacterial filament) AA042_RS06345 PF07963 Prokaryotic N-terminal methylation motif AA042_RS06370 PF02401 LytB protein AA042_RS06375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AA042_RS06380 PF01252 Signal peptidase (SPase) II AA042_RS06385 PF00133 tRNA synthetases class I (I, L, M and V) AA042_RS06385 PF08264 Anticodon-binding domain of tRNA AA042_RS06385 PF06827 Zinc finger found in FPG and IleRS AA042_RS06390 PF01687 Riboflavin kinase AA042_RS06390 PF06574 FAD synthetase AA042_RS06395 PF03023 Lipid II flippase MurJ AA042_RS06405 PF01649 Ribosomal protein S20 AA042_RS06410 PF05981 CreA protein AA042_RS06420 PF01926 50S ribosome-binding GTPase AA042_RS06420 PF01018 GTP1/OBG AA042_RS06425 PF01016 Ribosomal L27 protein AA042_RS06430 PF00829 Ribosomal prokaryotic L21 protein AA042_RS06435 PF00348 Polyprenyl synthetase AA042_RS06440 PF08274 PhnA Zinc-Ribbon AA042_RS06440 PF03831 PhnA domain AA042_RS06445 PF00132 Bacterial transferase hexapeptide (six repeats) AA042_RS06445 PF12804 MobA-like NTP transferase domain AA042_RS06450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AA042_RS06450 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AA042_RS06455 PF03350 Uncharacterized protein family, UPF0114 AA042_RS06470 PF05362 Lon protease (S16) C-terminal proteolytic domain AA042_RS06470 PF13654 AAA domain AA042_RS06505 PF00005 ABC transporter AA042_RS06505 PF12848 ABC transporter AA042_RS06510 PF00563 EAL domain AA042_RS06510 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS06510 PF03707 Bacterial signalling protein N terminal repeat AA042_RS06515 PF00464 Serine hydroxymethyltransferase AA042_RS06520 PF02492 CobW/HypB/UreG, nucleotide-binding domain AA042_RS06520 PF07683 Cobalamin synthesis protein cobW C-terminal domain AA042_RS06525 PF04328 Selenoprotein, putative AA042_RS06530 PF02554 Carbon starvation protein CstA AA042_RS06530 PF13722 5TM C-terminal transporter carbon starvation CstA AA042_RS06535 PF07238 PilZ domain AA042_RS06540 PF18073 Rubredoxin metal binding domain AA042_RS06550 PF06628 Catalase-related immune-responsive AA042_RS06550 PF00199 Catalase AA042_RS06555 PF01741 Large-conductance mechanosensitive channel, MscL AA042_RS06560 PF00175 Oxidoreductase NAD-binding domain AA042_RS06560 PF00970 Oxidoreductase FAD-binding domain AA042_RS06565 PF00196 Bacterial regulatory proteins, luxR family AA042_RS06565 PF03472 Autoinducer binding domain AA042_RS06570 PF05175 Methyltransferase small domain AA042_RS06580 PF02322 Cytochrome bd terminal oxidase subunit II AA042_RS06585 PF01654 Cytochrome bd terminal oxidase subunit I AA042_RS06600 PF00860 Permease family AA042_RS06605 PF05958 tRNA (Uracil-5-)-methyltransferase AA042_RS06610 PF02321 Outer membrane efflux protein AA042_RS06615 PF00529 HlyD membrane-fusion protein of T1SS AA042_RS06620 PF00664 ABC transporter transmembrane region AA042_RS06620 PF00005 ABC transporter AA042_RS06625 PF06438 Heme-binding protein A (HasA) AA042_RS06645 PF04228 Putative neutral zinc metallopeptidase AA042_RS06650 PF13419 Haloacid dehalogenase-like hydrolase AA042_RS06660 PF13302 Acetyltransferase (GNAT) domain AA042_RS06665 PF00850 Histone deacetylase domain AA042_RS06670 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA042_RS06670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AA042_RS06675 PF00271 Helicase conserved C-terminal domain AA042_RS06675 PF00270 DEAD/DEAH box helicase AA042_RS06680 PF00892 EamA-like transporter family AA042_RS06730 PF00270 DEAD/DEAH box helicase AA042_RS06730 PF04408 Helicase associated domain (HA2) AA042_RS06730 PF08482 ATP-dependent helicase C-terminal AA042_RS06730 PF00271 Helicase conserved C-terminal domain AA042_RS06740 PF01545 Cation efflux family AA042_RS06740 PF16916 Dimerisation domain of Zinc Transporter AA042_RS06750 PF13404 AsnC-type helix-turn-helix domain AA042_RS06750 PF01037 Lrp/AsnC ligand binding domain AA042_RS06760 PF00849 RNA pseudouridylate synthase AA042_RS06765 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AA042_RS06765 PF01048 Phosphorylase superfamily AA042_RS06770 PF18158 Adaptive response protein AidB N-terminal domain AA042_RS06770 PF02770 Acyl-CoA dehydrogenase, middle domain AA042_RS06770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS06775 PF01627 Hpt domain AA042_RS06775 PF00072 Response regulator receiver domain AA042_RS06775 PF00672 HAMP domain AA042_RS06775 PF17149 Periplasmic sensor domain found in signal transduction proteins AA042_RS06775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS06775 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS06780 PF08543 Phosphomethylpyrimidine kinase AA042_RS06785 PF02581 Thiamine monophosphate synthase AA042_RS06790 PF00202 Aminotransferase class-III AA042_RS06805 PF04055 Radical SAM superfamily AA042_RS06805 PF00919 Uncharacterized protein family UPF0004 AA042_RS06805 PF01938 TRAM domain AA042_RS06810 PF02562 PhoH-like protein AA042_RS06815 PF02130 Uncharacterized protein family UPF0054 AA042_RS06820 PF03471 Transporter associated domain AA042_RS06820 PF00571 CBS domain AA042_RS06825 PF00795 Carbon-nitrogen hydrolase AA042_RS06840 PF08264 Anticodon-binding domain of tRNA AA042_RS06840 PF00133 tRNA synthetases class I (I, L, M and V) AA042_RS06840 PF13603 Leucyl-tRNA synthetase, Domain 2 AA042_RS06840 PF09334 tRNA synthetases class I (M) AA042_RS06860 PF13406 Transglycosylase SLT domain AA042_RS06865 PF02016 LD-carboxypeptidase N-terminal domain AA042_RS06865 PF17676 LD-carboxypeptidase C-terminal domain AA042_RS06870 PF04055 Radical SAM superfamily AA042_RS06870 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AA042_RS06875 PF03099 Biotin/lipoate A/B protein ligase family AA042_RS06880 PF04359 Protein of unknown function (DUF493) AA042_RS06885 PF00768 D-alanyl-D-alanine carboxypeptidase AA042_RS06885 PF07943 Penicillin-binding protein 5, C-terminal domain AA042_RS06890 PF05036 Sporulation related domain AA042_RS06890 PF03330 Lytic transglycolase AA042_RS06900 PF01098 Cell cycle protein AA042_RS06905 PF00905 Penicillin binding protein transpeptidase domain AA042_RS06905 PF03717 Penicillin-binding Protein dimerisation domain AA042_RS06910 PF02590 Predicted SPOUT methyltransferase AA042_RS06920 PF01467 Cytidylyltransferase-like AA042_RS06925 PF00171 Aldehyde dehydrogenase family AA042_RS06930 PF02245 Methylpurine-DNA glycosylase (MPG) AA042_RS06935 PF09335 SNARE associated Golgi protein AA042_RS06945 PF04172 LrgB-like family AA042_RS06950 PF03788 LrgA family AA042_RS06960 PF13460 NAD(P)H-binding AA042_RS06970 PF02441 Flavoprotein AA042_RS06975 PF08245 Mur ligase middle domain AA042_RS06975 PF02875 Mur ligase family, glutamate ligase domain AA042_RS06975 PF01225 Mur ligase family, catalytic domain AA042_RS06990 PF00171 Aldehyde dehydrogenase family AA042_RS06995 PF13520 Amino acid permease AA042_RS07000 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AA042_RS07005 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AA042_RS07010 PF09335 SNARE associated Golgi protein AA042_RS07015 PF06167 Glucose-regulated metallo-peptidase M90 AA042_RS07020 PF00719 Inorganic pyrophosphatase AA042_RS07025 PF01381 Helix-turn-helix AA042_RS07025 PF00717 Peptidase S24-like AA042_RS07065 PF09588 YqaJ-like viral recombinase domain AA042_RS07075 PF04002 RadC-like JAB domain AA042_RS07155 PF03793 PASTA domain AA042_RS07155 PF00069 Protein kinase domain AA042_RS07195 PF01590 GAF domain AA042_RS07195 PF02954 Bacterial regulatory protein, Fis family AA042_RS07195 PF00158 Sigma-54 interaction domain AA042_RS07200 PF10431 C-terminal, D2-small domain, of ClpB protein AA042_RS07200 PF00004 ATPase family associated with various cellular activities (AAA) AA042_RS07200 PF07724 AAA domain (Cdc48 subfamily) AA042_RS07200 PF17871 AAA lid domain AA042_RS07235 PF02609 Exonuclease VII small subunit AA042_RS07240 PF00348 Polyprenyl synthetase AA042_RS07245 PF02779 Transketolase, pyrimidine binding domain AA042_RS07245 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AA042_RS07245 PF02780 Transketolase, C-terminal domain AA042_RS07250 PF07715 TonB-dependent Receptor Plug Domain AA042_RS07250 PF00593 TonB dependent receptor AA042_RS07255 PF01497 Periplasmic binding protein AA042_RS07265 PF00925 GTP cyclohydrolase II AA042_RS07270 PF02769 AIR synthase related protein, C-terminal domain AA042_RS07270 PF00586 AIR synthase related protein, N-terminal domain AA042_RS07275 PF01029 NusB family AA042_RS07280 PF00885 6,7-dimethyl-8-ribityllumazine synthase AA042_RS07285 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AA042_RS07285 PF00925 GTP cyclohydrolase II AA042_RS07290 PF00677 Lumazine binding domain AA042_RS07295 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AA042_RS07295 PF01872 RibD C-terminal domain AA042_RS07300 PF03477 ATP cone domain AA042_RS07315 PF00085 Thioredoxin AA042_RS07330 PF00005 ABC transporter AA042_RS07345 PF03922 OmpW family AA042_RS07350 PF16363 GDP-mannose 4,6 dehydratase AA042_RS07360 PF00924 Mechanosensitive ion channel AA042_RS07365 PF03466 LysR substrate binding domain AA042_RS07365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS07370 PF07690 Major Facilitator Superfamily AA042_RS07375 PF03573 outer membrane porin, OprD family AA042_RS07385 PF04303 PrpF protein AA042_RS07390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS07390 PF03466 LysR substrate binding domain AA042_RS07395 PF00436 Single-strand binding protein family AA042_RS07400 PF07690 Major Facilitator Superfamily AA042_RS07410 PF00210 Ferritin-like domain AA042_RS07420 PF01196 Ribosomal protein L17 AA042_RS07425 PF01000 RNA polymerase Rpb3/RpoA insert domain AA042_RS07425 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AA042_RS07425 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AA042_RS07430 PF00163 Ribosomal protein S4/S9 N-terminal domain AA042_RS07430 PF01479 S4 domain AA042_RS07435 PF00411 Ribosomal protein S11 AA042_RS07440 PF00416 Ribosomal protein S13/S18 AA042_RS07445 PF00444 Ribosomal protein L36 AA042_RS07450 PF00344 SecY translocase AA042_RS07455 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AA042_RS07460 PF00327 Ribosomal protein L30p/L7e AA042_RS07465 PF03719 Ribosomal protein S5, C-terminal domain AA042_RS07465 PF00333 Ribosomal protein S5, N-terminal domain AA042_RS07470 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AA042_RS07475 PF00347 Ribosomal protein L6 AA042_RS07480 PF00410 Ribosomal protein S8 AA042_RS07485 PF00253 Ribosomal protein S14p/S29e AA042_RS07490 PF00673 ribosomal L5P family C-terminus AA042_RS07490 PF00281 Ribosomal protein L5 AA042_RS07495 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AA042_RS07495 PF00467 KOW motif AA042_RS07500 PF00238 Ribosomal protein L14p/L23e AA042_RS07505 PF00366 Ribosomal protein S17 AA042_RS07510 PF00831 Ribosomal L29 protein AA042_RS07515 PF00252 Ribosomal protein L16p/L10e AA042_RS07520 PF07650 KH domain AA042_RS07520 PF00189 Ribosomal protein S3, C-terminal domain AA042_RS07525 PF00237 Ribosomal protein L22p/L17e AA042_RS07530 PF00203 Ribosomal protein S19 AA042_RS07535 PF03947 Ribosomal Proteins L2, C-terminal domain AA042_RS07535 PF00181 Ribosomal Proteins L2, RNA binding domain AA042_RS07540 PF00276 Ribosomal protein L23 AA042_RS07545 PF00573 Ribosomal protein L4/L1 family AA042_RS07550 PF00297 Ribosomal protein L3 AA042_RS07555 PF00338 Ribosomal protein S10p/S20e AA042_RS07560 PF00009 Elongation factor Tu GTP binding domain AA042_RS07560 PF03144 Elongation factor Tu domain 2 AA042_RS07560 PF03143 Elongation factor Tu C-terminal domain AA042_RS07565 PF00009 Elongation factor Tu GTP binding domain AA042_RS07565 PF14492 Elongation Factor G, domain II AA042_RS07565 PF03764 Elongation factor G, domain IV AA042_RS07565 PF00679 Elongation factor G C-terminus AA042_RS07565 PF03144 Elongation factor Tu domain 2 AA042_RS07570 PF00177 Ribosomal protein S7p/S5e AA042_RS07575 PF00164 Ribosomal protein S12/S23 AA042_RS07580 PF04998 RNA polymerase Rpb1, domain 5 AA042_RS07580 PF05000 RNA polymerase Rpb1, domain 4 AA042_RS07580 PF04983 RNA polymerase Rpb1, domain 3 AA042_RS07580 PF00623 RNA polymerase Rpb1, domain 2 AA042_RS07580 PF04997 RNA polymerase Rpb1, domain 1 AA042_RS07585 PF04563 RNA polymerase beta subunit AA042_RS07585 PF04561 RNA polymerase Rpb2, domain 2 AA042_RS07585 PF04560 RNA polymerase Rpb2, domain 7 AA042_RS07585 PF04565 RNA polymerase Rpb2, domain 3 AA042_RS07585 PF10385 RNA polymerase beta subunit external 1 domain AA042_RS07585 PF00562 RNA polymerase Rpb2, domain 6 AA042_RS07590 PF00542 Ribosomal protein L7/L12 C-terminal domain AA042_RS07590 PF16320 Ribosomal protein L7/L12 dimerisation domain AA042_RS07595 PF00466 Ribosomal protein L10 AA042_RS07600 PF00687 Ribosomal protein L1p/L10e family AA042_RS07605 PF00298 Ribosomal protein L11, RNA binding domain AA042_RS07605 PF03946 Ribosomal protein L11, N-terminal domain AA042_RS07610 PF02357 Transcription termination factor nusG AA042_RS07610 PF00467 KOW motif AA042_RS07615 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AA042_RS07645 PF03309 Type III pantothenate kinase AA042_RS07650 PF02237 Biotin protein ligase C terminal domain AA042_RS07650 PF03099 Biotin/lipoate A/B protein ligase family AA042_RS07650 PF08279 HTH domain AA042_RS07685 PF00579 tRNA synthetases class I (W and Y) AA042_RS07685 PF01479 S4 domain AA042_RS07690 PF04225 Opacity-associated protein A LysM-like domain AA042_RS07690 PF01551 Peptidase family M23 AA042_RS07695 PF03702 Anhydro-N-acetylmuramic acid kinase AA042_RS07700 PF01521 Iron-sulphur cluster biosynthesis AA042_RS07705 PF02774 Semialdehyde dehydrogenase, dimerisation domain AA042_RS07705 PF01118 Semialdehyde dehydrogenase, NAD binding domain AA042_RS07725 PF00106 short chain dehydrogenase AA042_RS07730 PF01230 HIT domain AA042_RS07735 PF03232 Ubiquinone biosynthesis protein COQ7 AA042_RS07740 PF02675 S-adenosylmethionine decarboxylase AA042_RS07745 PF02566 OsmC-like protein AA042_RS07750 PF00027 Cyclic nucleotide-binding domain AA042_RS07750 PF13545 Crp-like helix-turn-helix domain AA042_RS07760 PF00218 Indole-3-glycerol phosphate synthase AA042_RS07765 PF02885 Glycosyl transferase family, helical bundle domain AA042_RS07765 PF00591 Glycosyl transferase family, a/b domain AA042_RS07770 PF00117 Glutamine amidotransferase class-I AA042_RS07775 PF04715 Anthranilate synthase component I, N terminal region AA042_RS07775 PF00425 chorismate binding enzyme AA042_RS07780 PF13419 Haloacid dehalogenase-like hydrolase AA042_RS07785 PF00834 Ribulose-phosphate 3 epimerase family AA042_RS07795 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS07810 PF08402 TOBE domain AA042_RS07810 PF00005 ABC transporter AA042_RS07815 PF00072 Response regulator receiver domain AA042_RS07815 PF00196 Bacterial regulatory proteins, luxR family AA042_RS07820 PF07730 Histidine kinase AA042_RS07820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS07820 PF00672 HAMP domain AA042_RS07830 PF00226 DnaJ domain AA042_RS07830 PF05099 Tellurite resistance protein TerB AA042_RS07845 PF03968 OstA-like protein AA042_RS07845 PF04453 LPS transport system D AA042_RS07850 PF00639 PPIC-type PPIASE domain AA042_RS07850 PF09312 SurA N-terminal domain AA042_RS07855 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AA042_RS07860 PF00398 Ribosomal RNA adenine dimethylase AA042_RS07865 PF04379 ApaG domain AA042_RS07870 PF00149 Calcineurin-like phosphoesterase AA042_RS07875 PF00581 Rhodanese-like domain AA042_RS07880 PF06798 PrkA serine protein kinase C-terminal domain AA042_RS07880 PF08298 PrkA AAA domain AA042_RS07885 PF04285 Protein of unknown function (DUF444) AA042_RS07890 PF04293 SpoVR like protein AA042_RS07895 PF12627 Probable RNA and SrmB- binding site of polymerase A AA042_RS07895 PF01743 Poly A polymerase head domain AA042_RS07895 PF01966 HD domain AA042_RS07900 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AA042_RS07900 PF00809 Pterin binding enzyme AA042_RS07910 PF02660 Glycerol-3-phosphate acyltransferase AA042_RS07915 PF00814 Glycoprotease family AA042_RS07920 PF01165 Ribosomal protein S21 AA042_RS07925 PF08278 DNA primase DnaG DnaB-binding AA042_RS07925 PF13662 Toprim domain AA042_RS07925 PF10410 DnaB-helicase binding domain of primase AA042_RS07925 PF08275 DNA primase catalytic core, N-terminal domain AA042_RS07925 PF01807 CHC2 zinc finger AA042_RS07930 PF04539 Sigma-70 region 3 AA042_RS07930 PF04546 Sigma-70, non-essential region AA042_RS07930 PF03979 Sigma-70 factor, region 1.1 AA042_RS07930 PF00140 Sigma-70 factor, region 1.2 AA042_RS07930 PF04542 Sigma-70 region 2 AA042_RS07930 PF04545 Sigma-70, region 4 AA042_RS07935 PF00563 EAL domain AA042_RS07935 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS07935 PF03707 Bacterial signalling protein N terminal repeat AA042_RS07950 PF01593 Flavin containing amine oxidoreductase AA042_RS07955 PF00795 Carbon-nitrogen hydrolase AA042_RS07960 PF00675 Insulinase (Peptidase family M16) AA042_RS07960 PF05193 Peptidase M16 inactive domain AA042_RS07965 PF08042 PqqA family AA042_RS07970 PF12706 Beta-lactamase superfamily domain AA042_RS07980 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AA042_RS07985 PF13186 Iron-sulfur cluster-binding domain AA042_RS07985 PF04055 Radical SAM superfamily AA042_RS07990 PF00326 Prolyl oligopeptidase family AA042_RS07995 PF01679 Proteolipid membrane potential modulator AA042_RS08000 PF00202 Aminotransferase class-III AA042_RS08005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS08005 PF03466 LysR substrate binding domain AA042_RS08010 PF02770 Acyl-CoA dehydrogenase, middle domain AA042_RS08010 PF12806 Acetyl-CoA dehydrogenase C-terminal like AA042_RS08010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS08010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS08015 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS08020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS08020 PF02770 Acyl-CoA dehydrogenase, middle domain AA042_RS08020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS08020 PF12806 Acetyl-CoA dehydrogenase C-terminal like AA042_RS08035 PF08241 Methyltransferase domain AA042_RS08045 PF00155 Aminotransferase class I and II AA042_RS08055 PF00156 Phosphoribosyl transferase domain AA042_RS08060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS08060 PF03459 TOBE domain AA042_RS08070 PF01636 Phosphotransferase enzyme family AA042_RS08075 PF00892 EamA-like transporter family AA042_RS08085 PF01274 Malate synthase AA042_RS08090 PF00072 Response regulator receiver domain AA042_RS08100 PF00929 Exonuclease AA042_RS08100 PF14579 Helix-hairpin-helix motif AA042_RS08100 PF07733 Bacterial DNA polymerase III alpha NTPase domain AA042_RS08100 PF02811 PHP domain AA042_RS08100 PF11490 DNA polymerase III polC-type N-terminus II AA042_RS08100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AA042_RS08100 PF14480 DNA polymerase III polC-type N-terminus I AA042_RS08105 PF04542 Sigma-70 region 2 AA042_RS08105 PF08281 Sigma-70, region 4 AA042_RS08140 PF18030 RimK PreATP-grasp domain AA042_RS08140 PF08443 RimK-like ATP-grasp domain AA042_RS08145 PF01553 Acyltransferase AA042_RS08170 PF08240 Alcohol dehydrogenase GroES-like domain AA042_RS08170 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AA042_RS08175 PF00551 Formyl transferase AA042_RS08185 PF17806 Sarcosine oxidase A3 domain AA042_RS08185 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA042_RS08185 PF08669 Glycine cleavage T-protein C-terminal barrel domain AA042_RS08185 PF01571 Aminomethyltransferase folate-binding domain AA042_RS08195 PF01266 FAD dependent oxidoreductase AA042_RS08200 PF00464 Serine hydroxymethyltransferase AA042_RS08205 PF01212 Beta-eliminating lyase AA042_RS08220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS08220 PF00672 HAMP domain AA042_RS08220 PF12729 Four helix bundle sensory module for signal transduction AA042_RS08225 PF00042 Globin AA042_RS08225 PF00970 Oxidoreductase FAD-binding domain AA042_RS08225 PF00175 Oxidoreductase NAD-binding domain AA042_RS08230 PF00355 Rieske [2Fe-2S] domain AA042_RS08230 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AA042_RS08245 PF01012 Electron transfer flavoprotein domain AA042_RS08245 PF00766 Electron transfer flavoprotein FAD-binding domain AA042_RS08250 PF02754 Cysteine-rich domain AA042_RS08250 PF13183 4Fe-4S dicluster domain AA042_RS08250 PF02665 Nitrate reductase gamma subunit AA042_RS08255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AA042_RS08295 PF01965 DJ-1/PfpI family AA042_RS08295 PF12833 Helix-turn-helix domain AA042_RS08315 PF01609 Transposase DDE domain AA042_RS08315 PF05598 Transposase domain (DUF772) AA042_RS08335 PF03315 Serine dehydratase beta chain AA042_RS08335 PF03313 Serine dehydratase alpha chain AA042_RS08340 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AA042_RS08345 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS08350 PF00005 ABC transporter AA042_RS08350 PF00571 CBS domain AA042_RS08355 PF02028 BCCT, betaine/carnitine/choline family transporter AA042_RS08360 PF00440 Bacterial regulatory proteins, tetR family AA042_RS08360 PF13977 BetI-type transcriptional repressor, C-terminal AA042_RS08365 PF00171 Aldehyde dehydrogenase family AA042_RS08370 PF05199 GMC oxidoreductase AA042_RS08370 PF00732 GMC oxidoreductase AA042_RS08375 PF03737 Aldolase/RraA AA042_RS08390 PF07690 Major Facilitator Superfamily AA042_RS08395 PF00271 Helicase conserved C-terminal domain AA042_RS08395 PF00270 DEAD/DEAH box helicase AA042_RS08395 PF03880 DbpA RNA binding domain AA042_RS08405 PF12805 FUSC-like inner membrane protein yccS AA042_RS08415 PF13673 Acetyltransferase (GNAT) domain AA042_RS08425 PF01863 Protein of unknown function DUF45 AA042_RS08430 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS08430 PF00072 Response regulator receiver domain AA042_RS08440 PF03150 Di-haem cytochrome c peroxidase AA042_RS08440 PF00034 Cytochrome c AA042_RS08450 PF07715 TonB-dependent Receptor Plug Domain AA042_RS08450 PF07660 Secretin and TonB N terminus short domain AA042_RS08450 PF00593 TonB dependent receptor AA042_RS08460 PF08281 Sigma-70, region 4 AA042_RS08460 PF04542 Sigma-70 region 2 AA042_RS08465 PF01116 Fructose-bisphosphate aldolase class-II AA042_RS08475 PF00162 Phosphoglycerate kinase AA042_RS08480 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AA042_RS08480 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AA042_RS08485 PF02780 Transketolase, C-terminal domain AA042_RS08485 PF00456 Transketolase, thiamine diphosphate binding domain AA042_RS08485 PF02779 Transketolase, pyrimidine binding domain AA042_RS08490 PF01022 Bacterial regulatory protein, arsR family AA042_RS08495 PF02772 S-adenosylmethionine synthetase, central domain AA042_RS08495 PF00438 S-adenosylmethionine synthetase, N-terminal domain AA042_RS08495 PF02773 S-adenosylmethionine synthetase, C-terminal domain AA042_RS08520 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA042_RS08525 PF01042 Endoribonuclease L-PSP AA042_RS08530 PF01266 FAD dependent oxidoreductase AA042_RS08535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS08535 PF03466 LysR substrate binding domain AA042_RS08540 PF01011 PQQ enzyme repeat AA042_RS08550 PF00999 Sodium/hydrogen exchanger family AA042_RS08555 PF01312 FlhB HrpN YscU SpaS Family AA042_RS08560 PF01311 Bacterial export proteins, family 1 AA042_RS08565 PF01313 Bacterial export proteins, family 3 AA042_RS08570 PF00813 FliP family AA042_RS08575 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AA042_RS08585 PF07321 Type III secretion protein YscO AA042_RS08590 PF18269 T3SS EscN ATPase C-terminal domain AA042_RS08590 PF02874 ATP synthase alpha/beta family, beta-barrel domain AA042_RS08590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AA042_RS08600 PF09059 TyeA AA042_RS08620 PF00771 FHIPEP family AA042_RS08635 PF04792 V antigen (LcrV) protein AA042_RS08640 PF07720 Tetratricopeptide repeat AA042_RS08645 PF04888 Secretion system effector C (SseC) like family AA042_RS08650 PF05844 YopD protein AA042_RS08655 PF05932 Tir chaperone protein (CesT) family AA042_RS08670 PF12833 Helix-turn-helix domain AA042_RS08685 PF03958 Bacterial type II/III secretion system short domain AA042_RS08685 PF00263 Bacterial type II and III secretion system protein AA042_RS08690 PF16697 Inner membrane component of T3SS, cytoplasmic domain AA042_RS08690 PF16693 Inner membrane component of T3SS, periplasmic domain AA042_RS08700 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF AA042_RS08705 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) AA042_RS08715 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI AA042_RS08725 PF06578 YOP proteins translocation protein K (YscK) AA042_RS08730 PF02108 Flagellar assembly protein FliH AA042_RS08755 PF04452 RNA methyltransferase AA042_RS08760 PF00202 Aminotransferase class-III AA042_RS08765 PF01292 Prokaryotic cytochrome b561 AA042_RS08770 PF04264 YceI-like domain AA042_RS08775 PF00271 Helicase conserved C-terminal domain AA042_RS08775 PF00270 DEAD/DEAH box helicase AA042_RS08780 PF02219 Methylenetetrahydrofolate reductase AA042_RS08785 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AA042_RS08785 PF05221 S-adenosyl-L-homocysteine hydrolase AA042_RS08795 PF01226 Formate/nitrite transporter AA042_RS08800 PF03006 Haemolysin-III related AA042_RS08835 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AA042_RS08835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS08840 PF01584 CheW-like domain AA042_RS08845 PF00072 Response regulator receiver domain AA042_RS08850 PF00072 Response regulator receiver domain AA042_RS08855 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AA042_RS08855 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AA042_RS08865 PF02622 Uncharacterized ACR, COG1678 AA042_RS08870 PF03652 Holliday junction resolvase AA042_RS08875 PF00156 Phosphoribosyl transferase domain AA042_RS08880 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AA042_RS08880 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AA042_RS08885 PF01979 Amidohydrolase family AA042_RS08900 PF00877 NlpC/P60 family AA042_RS08905 PF00437 Type II/IV secretion system protein AA042_RS08910 PF01168 Alanine racemase, N-terminal domain AA042_RS08915 PF14748 Pyrroline-5-carboxylate reductase dimerisation AA042_RS08915 PF03807 NADP oxidoreductase coenzyme F420-dependent AA042_RS08920 PF02325 YGGT family AA042_RS08925 PF02594 Uncharacterised ACR, YggU family COG1872 AA042_RS08930 PF00561 alpha/beta hydrolase fold AA042_RS08935 PF00561 alpha/beta hydrolase fold AA042_RS08935 PF07021 Methionine biosynthesis protein MetW AA042_RS08945 PF01725 Ham1 family AA042_RS08950 PF04055 Radical SAM superfamily AA042_RS08950 PF06969 HemN C-terminal domain AA042_RS08960 PF01757 Acyltransferase family AA042_RS08960 PF01168 Alanine racemase, N-terminal domain AA042_RS08960 PF00842 Alanine racemase, C-terminal domain AA042_RS08965 PF02390 Putative methyltransferase AA042_RS08970 PF05690 Thiazole biosynthesis protein ThiG AA042_RS08975 PF02597 ThiS family AA042_RS08975 PF05690 Thiazole biosynthesis protein ThiG AA042_RS08980 PF04241 Protein of unknown function (DUF423) AA042_RS08985 PF00912 Transglycosylase AA042_RS08990 PF04542 Sigma-70 region 2 AA042_RS08990 PF04545 Sigma-70, region 4 AA042_RS08990 PF00140 Sigma-70 factor, region 1.2 AA042_RS08995 PF18075 FtsX extracellular domain AA042_RS09000 PF00005 ABC transporter AA042_RS09005 PF00448 SRP54-type protein, GTPase domain AA042_RS09005 PF02881 SRP54-type protein, helical bundle domain AA042_RS09010 PF05193 Peptidase M16 inactive domain AA042_RS09010 PF00675 Insulinase (Peptidase family M16) AA042_RS09015 PF05193 Peptidase M16 inactive domain AA042_RS09025 PF05193 Peptidase M16 inactive domain AA042_RS09025 PF00675 Insulinase (Peptidase family M16) AA042_RS09030 PF05193 Peptidase M16 inactive domain AA042_RS09030 PF00675 Insulinase (Peptidase family M16) AA042_RS09045 PF00675 Insulinase (Peptidase family M16) AA042_RS09045 PF05193 Peptidase M16 inactive domain AA042_RS09065 PF00581 Rhodanese-like domain AA042_RS09070 PF00440 Bacterial regulatory proteins, tetR family AA042_RS09075 PF00171 Aldehyde dehydrogenase family AA042_RS09090 PF01467 Cytidylyltransferase-like AA042_RS09095 PF00037 4Fe-4S binding domain AA042_RS09100 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AA042_RS09100 PF06827 Zinc finger found in FPG and IleRS AA042_RS09100 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AA042_RS09110 PF17785 PUA-like domain AA042_RS09110 PF10672 S-adenosylmethionine-dependent methyltransferase AA042_RS09135 PF00920 Dehydratase family AA042_RS09140 PF05638 Type VI secretion system effector, Hcp AA042_RS09170 PF01926 50S ribosome-binding GTPase AA042_RS09170 PF07650 KH domain AA042_RS09175 PF01266 FAD dependent oxidoreductase AA042_RS09175 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AA042_RS09185 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS09190 PF00005 ABC transporter AA042_RS09190 PF08402 TOBE domain AA042_RS09195 PF03466 LysR substrate binding domain AA042_RS09195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS09200 PF00403 Heavy-metal-associated domain AA042_RS09205 PF13411 MerR HTH family regulatory protein AA042_RS09215 PF00303 Thymidylate synthase AA042_RS09220 PF01790 Prolipoprotein diacylglyceryl transferase AA042_RS09225 PF01925 Sulfite exporter TauE/SafE AA042_RS09235 PF01590 GAF domain AA042_RS09235 PF05524 PEP-utilising enzyme, N-terminal AA042_RS09235 PF00391 PEP-utilising enzyme, mobile domain AA042_RS09235 PF02896 PEP-utilising enzyme, TIM barrel domain AA042_RS09240 PF00293 NUDIX domain AA042_RS09255 PF00291 Pyridoxal-phosphate dependent enzyme AA042_RS09255 PF00585 C-terminal regulatory domain of Threonine dehydratase AA042_RS09260 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AA042_RS09270 PF07311 Dodecin AA042_RS09285 PF00291 Pyridoxal-phosphate dependent enzyme AA042_RS09290 PF00290 Tryptophan synthase alpha chain AA042_RS09295 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS09305 PF03180 NLPA lipoprotein AA042_RS09310 PF00296 Luciferase-like monooxygenase AA042_RS09315 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS09315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS09320 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS09320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS09330 PF06977 SdiA-regulated AA042_RS09335 PF06977 SdiA-regulated AA042_RS09345 PF00194 Eukaryotic-type carbonic anhydrase AA042_RS09350 PF00120 Glutamine synthetase, catalytic domain AA042_RS09355 PF07722 Peptidase C26 AA042_RS09360 PF00120 Glutamine synthetase, catalytic domain AA042_RS09365 PF00202 Aminotransferase class-III AA042_RS09370 PF13416 Bacterial extracellular solute-binding protein AA042_RS09375 PF13416 Bacterial extracellular solute-binding protein AA042_RS09380 PF08402 TOBE domain AA042_RS09380 PF00005 ABC transporter AA042_RS09385 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS09390 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS09400 PF00486 Transcriptional regulatory protein, C terminal AA042_RS09400 PF00072 Response regulator receiver domain AA042_RS09405 PF11808 Phosphate regulon sensor protein PhoR AA042_RS09405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS09405 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS09405 PF00989 PAS fold AA042_RS09410 PF03471 Transporter associated domain AA042_RS09410 PF01595 Cyclin M transmembrane N-terminal domain AA042_RS09410 PF00571 CBS domain AA042_RS09415 PF03600 Citrate transporter AA042_RS09420 PF02690 Na+/Pi-cotransporter AA042_RS09425 PF05193 Peptidase M16 inactive domain AA042_RS09425 PF00675 Insulinase (Peptidase family M16) AA042_RS09430 PF00132 Bacterial transferase hexapeptide (six repeats) AA042_RS09435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS09435 PF03459 TOBE domain AA042_RS09440 PF00005 ABC transporter AA042_RS09445 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS09450 PF00296 Luciferase-like monooxygenase AA042_RS09460 PF03358 NADPH-dependent FMN reductase AA042_RS09465 PF00578 AhpC/TSA family AA042_RS09465 PF10417 C-terminal domain of 1-Cys peroxiredoxin AA042_RS09470 PF03573 outer membrane porin, OprD family AA042_RS09475 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AA042_RS09480 PF00005 ABC transporter AA042_RS09485 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS09490 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AA042_RS09500 PF14431 YwqJ-like deaminase AA042_RS09500 PF18807 Tripartite Tc toxins repeat AA042_RS09505 PF00296 Luciferase-like monooxygenase AA042_RS09510 PF02566 OsmC-like protein AA042_RS09535 PF13618 Gluconate 2-dehydrogenase subunit 3 AA042_RS09540 PF05199 GMC oxidoreductase AA042_RS09540 PF00732 GMC oxidoreductase AA042_RS09545 PF00034 Cytochrome c AA042_RS09545 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AA042_RS09565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AA042_RS09565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AA042_RS09565 PF01842 ACT domain AA042_RS09575 PF02913 FAD linked oxidases, C-terminal domain AA042_RS09575 PF01565 FAD binding domain AA042_RS09580 PF01557 Fumarylacetoacetate (FAA) hydrolase family AA042_RS09590 PF02405 Permease MlaE AA042_RS09595 PF00005 ABC transporter AA042_RS09610 PF07670 Nucleoside recognition AA042_RS09615 PF00375 Sodium:dicarboxylate symporter family AA042_RS09635 PF00158 Sigma-54 interaction domain AA042_RS09635 PF02954 Bacterial regulatory protein, Fis family AA042_RS09635 PF00072 Response regulator receiver domain AA042_RS09640 PF08448 PAS fold AA042_RS09640 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB AA042_RS09640 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS09640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS09640 PF00672 HAMP domain AA042_RS09645 PF12792 CSS motif domain associated with EAL AA042_RS09645 PF00563 EAL domain AA042_RS09650 PF01510 N-acetylmuramoyl-L-alanine amidase AA042_RS09655 PF00072 Response regulator receiver domain AA042_RS09655 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS09665 PF01323 DSBA-like thioredoxin domain AA042_RS09670 PF00034 Cytochrome c AA042_RS09680 PF01926 50S ribosome-binding GTPase AA042_RS09685 PF01612 3'-5' exonuclease AA042_RS09685 PF01367 5'-3' exonuclease, C-terminal SAM fold AA042_RS09685 PF00476 DNA polymerase family A AA042_RS09685 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AA042_RS09695 PF01636 Phosphotransferase enzyme family AA042_RS09700 PF01297 Zinc-uptake complex component A periplasmic AA042_RS09715 PF00950 ABC 3 transport family AA042_RS09725 PF18011 C-terminal domain found in long catalases AA042_RS09725 PF06628 Catalase-related immune-responsive AA042_RS09725 PF00199 Catalase AA042_RS09730 PF00005 ABC transporter AA042_RS09730 PF09383 NIL domain AA042_RS09740 PF03180 NLPA lipoprotein AA042_RS09745 PF02630 SCO1/SenC AA042_RS09755 PF02628 Cytochrome oxidase assembly protein AA042_RS09770 PF00510 Cytochrome c oxidase subunit III AA042_RS09775 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AA042_RS09785 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AA042_RS09785 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AA042_RS09795 PF00484 Carbonic anhydrase AA042_RS09835 PF04345 Chorismate lyase AA042_RS09840 PF00301 Rubredoxin AA042_RS09845 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA042_RS09845 PF18113 Rubredoxin binding C-terminal domain AA042_RS09850 PF00216 Bacterial DNA-binding protein AA042_RS09865 PF00271 Helicase conserved C-terminal domain AA042_RS09865 PF17191 RecG wedge domain AA042_RS09865 PF00270 DEAD/DEAH box helicase AA042_RS09870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS09870 PF03466 LysR substrate binding domain AA042_RS09875 PF03544 Gram-negative bacterial TonB protein C-terminal AA042_RS09880 PF02472 Biopolymer transport protein ExbD/TolR AA042_RS09885 PF01618 MotA/TolQ/ExbB proton channel family AA042_RS09900 PF01042 Endoribonuclease L-PSP AA042_RS09905 PF13291 ACT domain AA042_RS09905 PF04607 Region found in RelA / SpoT proteins AA042_RS09905 PF02824 TGS domain AA042_RS09910 PF01192 RNA polymerase Rpb6 AA042_RS09915 PF00625 Guanylate kinase AA042_RS09920 PF08340 Domain of unknown function (DUF1732) AA042_RS09920 PF03755 YicC-like family, N-terminal region AA042_RS09925 PF01138 3' exoribonuclease family, domain 1 AA042_RS09925 PF03725 3' exoribonuclease family, domain 2 AA042_RS09940 PF03372 Endonuclease/Exonuclease/phosphatase family AA042_RS09945 PF00156 Phosphoribosyl transferase domain AA042_RS09950 PF00696 Amino acid kinase family AA042_RS09955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AA042_RS09955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AA042_RS09955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AA042_RS09955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AA042_RS09965 PF00692 dUTPase AA042_RS09970 PF04127 DNA / pantothenate metabolism flavoprotein AA042_RS09970 PF02441 Flavoprotein AA042_RS09975 PF04002 RadC-like JAB domain AA042_RS09980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AA042_RS09985 PF00830 Ribosomal L28 family AA042_RS09990 PF00471 Ribosomal protein L33 AA042_RS10015 PF00171 Aldehyde dehydrogenase family AA042_RS10025 PF13091 PLD-like domain AA042_RS10030 PF00155 Aminotransferase class I and II AA042_RS10030 PF00392 Bacterial regulatory proteins, gntR family AA042_RS10040 PF01266 FAD dependent oxidoreductase AA042_RS10050 PF01037 Lrp/AsnC ligand binding domain AA042_RS10055 PF01266 FAD dependent oxidoreductase AA042_RS10065 PF00842 Alanine racemase, C-terminal domain AA042_RS10065 PF01168 Alanine racemase, N-terminal domain AA042_RS10075 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AA042_RS10085 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AA042_RS10085 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AA042_RS10095 PF13361 UvrD-like helicase C-terminal domain AA042_RS10095 PF00580 UvrD/REP helicase N-terminal domain AA042_RS10110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS10110 PF03466 LysR substrate binding domain AA042_RS10130 PF03781 Sulfatase-modifying factor enzyme 1 AA042_RS10140 PF00005 ABC transporter AA042_RS10175 PF04380 Membrane fusogenic activity AA042_RS10180 PF00543 Nitrogen regulatory protein P-II AA042_RS10185 PF00909 Ammonium Transporter Family AA042_RS10195 PF13419 Haloacid dehalogenase-like hydrolase AA042_RS10200 PF00589 Phage integrase family AA042_RS10200 PF02899 Phage integrase, N-terminal SAM-like domain AA042_RS10210 PF01678 Diaminopimelate epimerase AA042_RS10215 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AA042_RS10215 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AA042_RS10220 PF13627 Prokaryotic lipoprotein-attachment site AA042_RS10230 PF01491 Frataxin-like domain AA042_RS10240 PF14760 Rnk N-terminus AA042_RS10240 PF01272 Transcription elongation factor, GreA/GreB, C-term AA042_RS10245 PF12633 Adenylate cyclase NT domain AA042_RS10245 PF01295 Adenylate cyclase, class-I AA042_RS10270 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS10275 PF12857 TOBE-like domain AA042_RS10275 PF00005 ABC transporter AA042_RS10295 PF09526 Probable metal-binding protein (DUF2387) AA042_RS10300 PF01432 Peptidase family M3 AA042_RS10305 PF00132 Bacterial transferase hexapeptide (six repeats) AA042_RS10310 PF13419 Haloacid dehalogenase-like hydrolase AA042_RS10320 PF00005 ABC transporter AA042_RS10325 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS10330 PF09084 NMT1/THI5 like AA042_RS10335 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AA042_RS10340 PF00884 Sulfatase AA042_RS10340 PF16347 Domain of unknown function (DUF4976) AA042_RS10345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS10345 PF03466 LysR substrate binding domain AA042_RS10360 PF03544 Gram-negative bacterial TonB protein C-terminal AA042_RS10365 PF01618 MotA/TolQ/ExbB proton channel family AA042_RS10370 PF02472 Biopolymer transport protein ExbD/TolR AA042_RS10380 PF00158 Sigma-54 interaction domain AA042_RS10385 PF03180 NLPA lipoprotein AA042_RS10395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AA042_RS10400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AA042_RS10405 PF00873 AcrB/AcrD/AcrF family AA042_RS10415 PF02028 BCCT, betaine/carnitine/choline family transporter AA042_RS10425 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AA042_RS10425 PF01488 Shikimate / quinate 5-dehydrogenase AA042_RS10425 PF08501 Shikimate dehydrogenase substrate binding domain AA042_RS10430 PF01218 Coproporphyrinogen III oxidase AA042_RS10435 PF08240 Alcohol dehydrogenase GroES-like domain AA042_RS10435 PF00107 Zinc-binding dehydrogenase AA042_RS10440 PF01300 Telomere recombination AA042_RS10445 PF17782 DprA winged helix domain AA042_RS10445 PF02481 DNA recombination-mediator protein A AA042_RS10450 PF01327 Polypeptide deformylase AA042_RS10455 PF02911 Formyl transferase, C-terminal domain AA042_RS10455 PF00551 Formyl transferase AA042_RS10460 PF01189 16S rRNA methyltransferase RsmB/F AA042_RS10460 PF01029 NusB family AA042_RS10465 PF02254 TrkA-N domain AA042_RS10465 PF02080 TrkA-C domain AA042_RS10480 PF03352 Methyladenine glycosylase AA042_RS10485 PF02091 Glycyl-tRNA synthetase alpha subunit AA042_RS10490 PF02092 Glycyl-tRNA synthetase beta subunit AA042_RS10490 PF05746 DALR anticodon binding domain AA042_RS10505 PF08946 Osmosensory transporter coiled coil AA042_RS10505 PF00083 Sugar (and other) transporter AA042_RS10510 PF05199 GMC oxidoreductase AA042_RS10510 PF00732 GMC oxidoreductase AA042_RS10520 PF00082 Subtilase family AA042_RS10520 PF12951 Passenger-associated-transport-repeat AA042_RS10520 PF03797 Autotransporter beta-domain AA042_RS10525 PF03797 Autotransporter beta-domain AA042_RS10525 PF12951 Passenger-associated-transport-repeat AA042_RS10525 PF00082 Subtilase family AA042_RS10530 PF00204 DNA gyrase B AA042_RS10530 PF00986 DNA gyrase B subunit, carboxyl terminus AA042_RS10530 PF18053 DNA gyrase B subunit insert domain AA042_RS10530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS10530 PF01751 Toprim domain AA042_RS10535 PF02463 RecF/RecN/SMC N terminal domain AA042_RS10540 PF02767 DNA polymerase III beta subunit, central domain AA042_RS10540 PF00712 DNA polymerase III beta subunit, N-terminal domain AA042_RS10540 PF02768 DNA polymerase III beta subunit, C-terminal domain AA042_RS10545 PF11638 DnaA N-terminal domain AA042_RS10545 PF08299 Bacterial dnaA protein helix-turn-helix AA042_RS10545 PF00308 Bacterial dnaA protein AA042_RS10550 PF00468 Ribosomal protein L34 AA042_RS10555 PF00825 Ribonuclease P AA042_RS10560 PF01809 Putative membrane protein insertion efficiency factor AA042_RS10565 PF14849 YidC periplasmic domain AA042_RS10565 PF02096 60Kd inner membrane protein AA042_RS10570 PF01926 50S ribosome-binding GTPase AA042_RS10570 PF12631 MnmE helical domain AA042_RS10570 PF10396 GTP-binding protein TrmE N-terminus AA042_RS10575 PF12848 ABC transporter AA042_RS10575 PF16326 ABC transporter C-terminal domain AA042_RS10575 PF00005 ABC transporter AA042_RS10580 PF01134 Glucose inhibited division protein A AA042_RS10580 PF13932 GidA associated domain AA042_RS10585 PF02527 rRNA small subunit methyltransferase G AA042_RS10590 PF13614 AAA domain AA042_RS10595 PF02195 ParB-like nuclease domain AA042_RS10595 PF17762 HTH domain found in ParB protein AA042_RS10600 PF03899 ATP synthase I chain AA042_RS10605 PF00119 ATP synthase A chain AA042_RS10610 PF00137 ATP synthase subunit C AA042_RS10615 PF00430 ATP synthase B/B' CF(0) AA042_RS10620 PF00213 ATP synthase delta (OSCP) subunit AA042_RS10625 PF00306 ATP synthase alpha/beta chain, C terminal domain AA042_RS10625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AA042_RS10625 PF02874 ATP synthase alpha/beta family, beta-barrel domain AA042_RS10630 PF00231 ATP synthase AA042_RS10635 PF02874 ATP synthase alpha/beta family, beta-barrel domain AA042_RS10635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AA042_RS10640 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AA042_RS10640 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AA042_RS10645 PF14602 Hexapeptide repeat of succinyl-transferase AA042_RS10645 PF12804 MobA-like NTP transferase domain AA042_RS10645 PF00132 Bacterial transferase hexapeptide (six repeats) AA042_RS10650 PF00455 DeoR C terminal sensor domain AA042_RS10650 PF08220 DeoR-like helix-turn-helix domain AA042_RS10655 PF01380 SIS domain AA042_RS10670 PF07728 AAA domain (dynein-related subfamily) AA042_RS10670 PF12102 Domain of unknown function (DUF3578) AA042_RS10700 PF01272 Transcription elongation factor, GreA/GreB, C-term AA042_RS10700 PF03449 Transcription elongation factor, N-terminal AA042_RS10705 PF00144 Beta-lactamase AA042_RS10715 PF13091 PLD-like domain AA042_RS10715 PF13396 Phospholipase_D-nuclease N-terminal AA042_RS10720 PF12276 Protein of unknown function (DUF3617) AA042_RS10725 PF02649 Type I GTP cyclohydrolase folE2 AA042_RS10740 PF07683 Cobalamin synthesis protein cobW C-terminal domain AA042_RS10740 PF02492 CobW/HypB/UreG, nucleotide-binding domain AA042_RS10750 PF08543 Phosphomethylpyrimidine kinase AA042_RS10755 PF03061 Thioesterase superfamily AA042_RS10760 PF02254 TrkA-N domain AA042_RS10760 PF00999 Sodium/hydrogen exchanger family AA042_RS10775 PF00892 EamA-like transporter family AA042_RS10780 PF13361 UvrD-like helicase C-terminal domain AA042_RS10780 PF00580 UvrD/REP helicase N-terminal domain AA042_RS10785 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS10785 PF00563 EAL domain AA042_RS10785 PF03707 Bacterial signalling protein N terminal repeat AA042_RS10790 PF01418 Helix-turn-helix domain, rpiR family AA042_RS10790 PF01380 SIS domain AA042_RS10800 PF03466 LysR substrate binding domain AA042_RS10800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS10805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AA042_RS10805 PF02785 Biotin carboxylase C-terminal domain AA042_RS10805 PF00289 Biotin carboxylase, N-terminal domain AA042_RS10810 PF02436 Conserved carboxylase domain AA042_RS10810 PF00682 HMGL-like AA042_RS10810 PF00364 Biotin-requiring enzyme AA042_RS10845 PF00155 Aminotransferase class I and II AA042_RS10845 PF00392 Bacterial regulatory proteins, gntR family AA042_RS10850 PF13416 Bacterial extracellular solute-binding protein AA042_RS10855 PF00850 Histone deacetylase domain AA042_RS10860 PF12833 Helix-turn-helix domain AA042_RS10860 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AA042_RS10865 PF17763 Glutaminase/Asparaginase C-terminal domain AA042_RS10865 PF00710 Asparaginase, N-terminal AA042_RS10880 PF00206 Lyase AA042_RS10880 PF10415 Fumarase C C-terminus AA042_RS10885 PF03466 LysR substrate binding domain AA042_RS10885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS10895 PF00731 AIR carboxylase AA042_RS10900 PF02222 ATP-grasp domain AA042_RS10900 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AA042_RS10920 PF03061 Thioesterase superfamily AA042_RS10925 PF07690 Major Facilitator Superfamily AA042_RS10930 PF12849 PBP superfamily domain AA042_RS10935 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS10940 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS10945 PF00005 ABC transporter AA042_RS10950 PF01895 PhoU domain AA042_RS10955 PF00072 Response regulator receiver domain AA042_RS10985 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AA042_RS10985 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AA042_RS10990 PF02233 NAD(P) transhydrogenase beta subunit AA042_RS10995 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AA042_RS11000 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AA042_RS11000 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AA042_RS11005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS11005 PF03466 LysR substrate binding domain AA042_RS11010 PF02770 Acyl-CoA dehydrogenase, middle domain AA042_RS11010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS11010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS11015 PF02515 CoA-transferase family III AA042_RS11085 PF00672 HAMP domain AA042_RS11085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS11085 PF02743 Cache domain AA042_RS11090 PF07729 FCD domain AA042_RS11090 PF00392 Bacterial regulatory proteins, gntR family AA042_RS11115 PF13533 Biotin-lipoyl like AA042_RS11120 PF02321 Outer membrane efflux protein AA042_RS11135 PF07715 TonB-dependent Receptor Plug Domain AA042_RS11135 PF00593 TonB dependent receptor AA042_RS11145 PF04542 Sigma-70 region 2 AA042_RS11145 PF04545 Sigma-70, region 4 AA042_RS11155 PF00171 Aldehyde dehydrogenase family AA042_RS11160 PF00202 Aminotransferase class-III AA042_RS11165 PF00486 Transcriptional regulatory protein, C terminal AA042_RS11165 PF00072 Response regulator receiver domain AA042_RS11175 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS11175 PF03707 Bacterial signalling protein N terminal repeat AA042_RS11175 PF00563 EAL domain AA042_RS11190 PF00206 Lyase AA042_RS11190 PF14698 Argininosuccinate lyase C-terminal AA042_RS11195 PF00072 Response regulator receiver domain AA042_RS11195 PF04397 LytTr DNA-binding domain AA042_RS11200 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AA042_RS11200 PF03900 Porphobilinogen deaminase, C-terminal domain AA042_RS11225 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AA042_RS11230 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AA042_RS11230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AA042_RS11250 PF00005 ABC transporter AA042_RS11250 PF12848 ABC transporter AA042_RS11260 PF01810 LysE type translocator AA042_RS11265 PF03239 Iron permease FTR1 family AA042_RS11270 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AA042_RS11280 PF09335 SNARE associated Golgi protein AA042_RS11290 PF02541 Ppx/GppA phosphatase family AA042_RS11295 PF00085 Thioredoxin AA042_RS11300 PF07498 Rho termination factor, N-terminal domain AA042_RS11300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AA042_RS11300 PF07497 Rho termination factor, RNA-binding domain AA042_RS11305 PF01757 Acyltransferase family AA042_RS11310 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AA042_RS11315 PF00175 Oxidoreductase NAD-binding domain AA042_RS11315 PF00111 2Fe-2S iron-sulfur cluster binding domain AA042_RS11315 PF00970 Oxidoreductase FAD-binding domain AA042_RS11330 PF07690 Major Facilitator Superfamily AA042_RS11340 PF01320 Colicin immunity protein / pyocin immunity protein AA042_RS11355 PF00005 ABC transporter AA042_RS11360 PF13533 Biotin-lipoyl like AA042_RS11370 PF01812 5-formyltetrahydrofolate cyclo-ligase family AA042_RS11380 PF05164 Cell division protein ZapA AA042_RS11390 PF03695 Uncharacterised protein family (UPF0149) AA042_RS11395 PF00557 Metallopeptidase family M24 AA042_RS11395 PF05195 Aminopeptidase P, N-terminal domain AA042_RS11400 PF01494 FAD binding domain AA042_RS11405 PF01494 FAD binding domain AA042_RS11415 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS11420 PF08669 Glycine cleavage T-protein C-terminal barrel domain AA042_RS11420 PF01571 Aminomethyltransferase folate-binding domain AA042_RS11425 PF01597 Glycine cleavage H-protein AA042_RS11430 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AA042_RS11440 PF01957 NfeD-like C-terminal, partner-binding AA042_RS11445 PF01145 SPFH domain / Band 7 family AA042_RS11445 PF16200 C-terminal region of band_7 AA042_RS11450 PF00437 Type II/IV secretion system protein AA042_RS11460 PF13404 AsnC-type helix-turn-helix domain AA042_RS11460 PF01037 Lrp/AsnC ligand binding domain AA042_RS11485 PF00384 Molybdopterin oxidoreductase AA042_RS11485 PF01568 Molydopterin dinucleotide binding domain AA042_RS11490 PF02634 FdhD/NarQ family AA042_RS11495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS11495 PF03466 LysR substrate binding domain AA042_RS11500 PF04972 BON domain AA042_RS11500 PF01476 LysM domain AA042_RS11505 PF13419 Haloacid dehalogenase-like hydrolase AA042_RS11510 PF00293 NUDIX domain AA042_RS11515 PF00459 Inositol monophosphatase family AA042_RS11525 PF00158 Sigma-54 interaction domain AA042_RS11525 PF00072 Response regulator receiver domain AA042_RS11525 PF02954 Bacterial regulatory protein, Fis family AA042_RS11530 PF02743 Cache domain AA042_RS11530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS11530 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS11535 PF04321 RmlD substrate binding domain AA042_RS11540 PF16363 GDP-mannose 4,6 dehydratase AA042_RS11545 PF04371 Porphyromonas-type peptidyl-arginine deiminase AA042_RS11565 PF03573 outer membrane porin, OprD family AA042_RS11585 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS11585 PF00672 HAMP domain AA042_RS11585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS11590 PF00486 Transcriptional regulatory protein, C terminal AA042_RS11590 PF00072 Response regulator receiver domain AA042_RS11600 PF00576 HIUase/Transthyretin family AA042_RS11610 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS11615 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS11620 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA042_RS11625 PF00005 ABC transporter AA042_RS11640 PF00491 Arginase family AA042_RS11645 PF03616 Sodium/glutamate symporter AA042_RS11650 PF08446 PAS fold AA042_RS11650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS11650 PF01590 GAF domain AA042_RS11650 PF00360 Phytochrome region AA042_RS11650 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS11660 PF06906 Protein of unknown function (DUF1272) AA042_RS11665 PF01022 Bacterial regulatory protein, arsR family AA042_RS11670 PF02040 Arsenical pump membrane protein AA042_RS11685 PF01320 Colicin immunity protein / pyocin immunity protein AA042_RS11700 PF04362 Bacterial Fe(2+) trafficking AA042_RS11705 PF14815 NUDIX domain AA042_RS11705 PF00730 HhH-GPD superfamily base excision DNA repair protein AA042_RS11705 PF10576 Iron-sulfur binding domain of endonuclease III AA042_RS11705 PF00633 Helix-hairpin-helix motif AA042_RS11715 PF07690 Major Facilitator Superfamily AA042_RS11720 PF00475 Imidazoleglycerol-phosphate dehydratase AA042_RS11725 PF00117 Glutamine amidotransferase class-I AA042_RS11735 PF00977 Histidine biosynthesis protein AA042_RS11740 PF00977 Histidine biosynthesis protein AA042_RS11750 PF04748 Divergent polysaccharide deacetylase AA042_RS11755 PF03572 Peptidase family S41 AA042_RS11755 PF13180 PDZ domain AA042_RS11760 PF01551 Peptidase family M23 AA042_RS11765 PF01676 Metalloenzyme superfamily AA042_RS11765 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AA042_RS11770 PF00581 Rhodanese-like domain AA042_RS11775 PF00462 Glutaredoxin AA042_RS11780 PF02556 Preprotein translocase subunit SecB AA042_RS11785 PF00588 SpoU rRNA Methylase family AA042_RS11800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS11800 PF00989 PAS fold AA042_RS11800 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS11815 PF03951 Glutamine synthetase, beta-Grasp domain AA042_RS11815 PF00120 Glutamine synthetase, catalytic domain AA042_RS11825 PF02568 Thiamine biosynthesis protein (ThiI) AA042_RS11825 PF02926 THUMP domain AA042_RS11840 PF00343 Carbohydrate phosphorylase AA042_RS11845 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AA042_RS11855 PF08212 Lipocalin-like domain AA042_RS11865 PF07687 Peptidase dimerisation domain AA042_RS11865 PF01546 Peptidase family M20/M25/M40 AA042_RS11870 PF00583 Acetyltransferase (GNAT) family AA042_RS11870 PF00696 Amino acid kinase family AA042_RS11880 PF04262 Glutamate-cysteine ligase AA042_RS11890 PF09371 Tex-like protein N-terminal domain AA042_RS11890 PF00575 S1 RNA binding domain AA042_RS11890 PF16921 Tex protein YqgF-like domain AA042_RS11890 PF17674 HHH domain AA042_RS11895 PF00486 Transcriptional regulatory protein, C terminal AA042_RS11895 PF00072 Response regulator receiver domain AA042_RS11900 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS11900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS11900 PF00672 HAMP domain AA042_RS11905 PF08443 RimK-like ATP-grasp domain AA042_RS11905 PF18030 RimK PreATP-grasp domain AA042_RS11910 PF18030 RimK PreATP-grasp domain AA042_RS11910 PF08443 RimK-like ATP-grasp domain AA042_RS11915 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS11915 PF08495 FIST N domain AA042_RS11915 PF00563 EAL domain AA042_RS11915 PF10442 FIST C domain AA042_RS11920 PF01479 S4 domain AA042_RS11930 PF01430 Hsp33 protein AA042_RS11940 PF01293 Phosphoenolpyruvate carboxykinase AA042_RS11950 PF09382 RQC domain AA042_RS11950 PF16124 RecQ zinc-binding AA042_RS11950 PF00570 HRDC domain AA042_RS11950 PF00271 Helicase conserved C-terminal domain AA042_RS11950 PF00270 DEAD/DEAH box helicase AA042_RS11965 PF00392 Bacterial regulatory proteins, gntR family AA042_RS11965 PF07702 UTRA domain AA042_RS11970 PF05962 HutD AA042_RS11975 PF01175 Urocanase Rossmann-like domain AA042_RS11975 PF17392 Urocanase C-terminal domain AA042_RS11975 PF17391 Urocanase N-terminal domain AA042_RS11980 PF00221 Aromatic amino acid lyase AA042_RS11985 PF00324 Amino acid permease AA042_RS11990 PF01979 Amidohydrolase family AA042_RS12000 PF00561 alpha/beta hydrolase fold AA042_RS12005 PF02580 D-Tyr-tRNA(Tyr) deacylase AA042_RS12010 PF04349 Periplasmic glucan biosynthesis protein, MdoG AA042_RS12015 PF00535 Glycosyl transferase family 2 AA042_RS12020 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA042_RS12025 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS12030 PF00005 ABC transporter AA042_RS12035 PF00672 HAMP domain AA042_RS12035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS12035 PF16591 Helical bimodular sensor domain AA042_RS12040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS12040 PF16591 Helical bimodular sensor domain AA042_RS12040 PF00672 HAMP domain AA042_RS12050 PF00902 Sec-independent protein translocase protein (TatC) AA042_RS12060 PF02416 mttA/Hcf106 family AA042_RS12065 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AA042_RS12070 PF01502 Phosphoribosyl-AMP cyclohydrolase AA042_RS12085 PF01209 ubiE/COQ5 methyltransferase family AA042_RS12115 PF00004 ATPase family associated with various cellular activities (AAA) AA042_RS12115 PF07724 AAA domain (Cdc48 subfamily) AA042_RS12120 PF00227 Proteasome subunit AA042_RS12130 PF05746 DALR anticodon binding domain AA042_RS12130 PF00750 tRNA synthetases class I (R) AA042_RS12130 PF03485 Arginyl tRNA synthetase N terminal domain AA042_RS12135 PF00271 Helicase conserved C-terminal domain AA042_RS12135 PF00270 DEAD/DEAH box helicase AA042_RS12135 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AA042_RS12135 PF18074 Primosomal protein N C-terminal domain AA042_RS12135 PF17764 3′ DNA-binding domain (3′BD) AA042_RS12140 PF01197 Ribosomal protein L31 AA042_RS12145 PF00565 Staphylococcal nuclease homologue AA042_RS12150 PF03949 Malic enzyme, NAD binding domain AA042_RS12150 PF00390 Malic enzyme, N-terminal domain AA042_RS12155 PF00912 Transglycosylase AA042_RS12155 PF00905 Penicillin binding protein transpeptidase domain AA042_RS12155 PF17092 Penicillin-binding protein OB-like domain AA042_RS12180 PF07660 Secretin and TonB N terminus short domain AA042_RS12180 PF03958 Bacterial type II/III secretion system short domain AA042_RS12180 PF11741 AMIN domain AA042_RS12180 PF00263 Bacterial type II and III secretion system protein AA042_RS12185 PF01202 Shikimate kinase AA042_RS12190 PF01761 3-dehydroquinate synthase AA042_RS12205 PF01645 Conserved region in glutamate synthase AA042_RS12205 PF00310 Glutamine amidotransferases class-II AA042_RS12205 PF04898 Glutamate synthase central domain AA042_RS12205 PF01493 GXGXG motif AA042_RS12210 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AA042_RS12210 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA042_RS12215 PF01208 Uroporphyrinogen decarboxylase (URO-D) AA042_RS12220 PF18416 N-acetylglucosamine binding protein domain 2 AA042_RS12220 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AA042_RS12235 PF03958 Bacterial type II/III secretion system short domain AA042_RS12235 PF00263 Bacterial type II and III secretion system protein AA042_RS12240 PF00437 Type II/IV secretion system protein AA042_RS12245 PF00482 Type II secretion system (T2SS), protein F AA042_RS12250 PF08334 Type II secretion system (T2SS), protein G AA042_RS12250 PF07963 Prokaryotic N-terminal methylation motif AA042_RS12255 PF12019 Type II transport protein GspH AA042_RS12255 PF07963 Prokaryotic N-terminal methylation motif AA042_RS12260 PF02501 Type II secretion system (T2SS), protein I AA042_RS12260 PF07963 Prokaryotic N-terminal methylation motif AA042_RS12265 PF07963 Prokaryotic N-terminal methylation motif AA042_RS12265 PF11612 Type II secretion system (T2SS), protein J AA042_RS12270 PF03934 Type II secretion system (T2SS), protein K AA042_RS12275 PF12693 GspL periplasmic domain AA042_RS12275 PF05134 Type II secretion system (T2SS), protein L AA042_RS12285 PF07690 Major Facilitator Superfamily AA042_RS12290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS12290 PF03466 LysR substrate binding domain AA042_RS12305 PF01381 Helix-turn-helix AA042_RS12320 PF02801 Beta-ketoacyl synthase, C-terminal domain AA042_RS12320 PF00109 Beta-ketoacyl synthase, N-terminal domain AA042_RS12345 PF08241 Methyltransferase domain AA042_RS12375 PF00221 Aromatic amino acid lyase AA042_RS12400 PF00550 Phosphopantetheine attachment site AA042_RS12405 PF00550 Phosphopantetheine attachment site AA042_RS12425 PF13614 AAA domain AA042_RS12430 PF00085 Thioredoxin AA042_RS12435 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AA042_RS12440 PF12794 Mechanosensitive ion channel inner membrane domain 1 AA042_RS12440 PF00924 Mechanosensitive ion channel AA042_RS12440 PF12795 Mechanosensitive ion channel porin domain AA042_RS12445 PF00999 Sodium/hydrogen exchanger family AA042_RS12445 PF02080 TrkA-C domain AA042_RS12445 PF03471 Transporter associated domain AA042_RS12450 PF04717 Type VI secretion system, phage-baseplate injector AA042_RS12470 PF00171 Aldehyde dehydrogenase family AA042_RS12470 PF01619 Proline dehydrogenase AA042_RS12470 PF14850 DNA-binding domain of Proline dehydrogenase AA042_RS12470 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AA042_RS12475 PF00474 Sodium:solute symporter family AA042_RS12485 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AA042_RS12490 PF01625 Peptide methionine sulfoxide reductase AA042_RS12495 PF00563 EAL domain AA042_RS12495 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS12495 PF03707 Bacterial signalling protein N terminal repeat AA042_RS12500 PF16655 PhoD-like phosphatase, N-terminal domain AA042_RS12500 PF09423 PhoD-like phosphatase AA042_RS12550 PF17831 Pyruvate dehydrogenase E1 component middle domain AA042_RS12550 PF00456 Transketolase, thiamine diphosphate binding domain AA042_RS12555 PF03710 Glutamate-ammonia ligase adenylyltransferase AA042_RS12555 PF08335 GlnD PII-uridylyltransferase AA042_RS12560 PF01063 Amino-transferase class IV AA042_RS12565 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AA042_RS12570 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AA042_RS12575 PF13439 Glycosyltransferase Family 4 AA042_RS12575 PF00534 Glycosyl transferases group 1 AA042_RS12610 PF07715 TonB-dependent Receptor Plug Domain AA042_RS12610 PF00593 TonB dependent receptor AA042_RS12620 PF02543 Carbamoyltransferase N-terminus AA042_RS12620 PF16861 Carbamoyltransferase C-terminus AA042_RS12625 PF13439 Glycosyltransferase Family 4 AA042_RS12625 PF00534 Glycosyl transferases group 1 AA042_RS12645 PF13439 Glycosyltransferase Family 4 AA042_RS12645 PF00534 Glycosyl transferases group 1 AA042_RS12650 PF00535 Glycosyl transferase family 2 AA042_RS12655 PF00132 Bacterial transferase hexapeptide (six repeats) AA042_RS12670 PF00664 ABC transporter transmembrane region AA042_RS12670 PF00005 ABC transporter AA042_RS12675 PF01467 Cytidylyltransferase-like AA042_RS12675 PF00294 pfkB family carbohydrate kinase AA042_RS12690 PF01266 FAD dependent oxidoreductase AA042_RS12695 PF00893 Small Multidrug Resistance protein AA042_RS12700 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AA042_RS12710 PF02321 Outer membrane efflux protein AA042_RS12715 PF13667 ThiC-associated domain AA042_RS12715 PF01964 Radical SAM ThiC family AA042_RS12730 PF00293 NUDIX domain AA042_RS12740 PF00149 Calcineurin-like phosphoesterase AA042_RS12750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS12750 PF00204 DNA gyrase B AA042_RS12750 PF01751 Toprim domain AA042_RS12750 PF00986 DNA gyrase B subunit, carboxyl terminus AA042_RS12765 PF00521 DNA gyrase/topoisomerase IV, subunit A AA042_RS12765 PF03989 DNA gyrase C-terminal domain, beta-propeller AA042_RS12785 PF02666 Phosphatidylserine decarboxylase AA042_RS12790 PF00581 Rhodanese-like domain AA042_RS12800 PF01618 MotA/TolQ/ExbB proton channel family AA042_RS12805 PF13677 Membrane MotB of proton-channel complex MotA/MotB AA042_RS12805 PF00691 OmpA family AA042_RS12810 PF03193 RsgA GTPase AA042_RS12815 PF00929 Exonuclease AA042_RS12820 PF03458 UPF0126 domain AA042_RS12840 PF08331 Domain of unknown function (DUF1730) AA042_RS12845 PF01256 Carbohydrate kinase AA042_RS12845 PF03853 YjeF-related protein N-terminus AA042_RS12850 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AA042_RS12855 PF01520 N-acetylmuramoyl-L-alanine amidase AA042_RS12855 PF11741 AMIN domain AA042_RS12870 PF17209 Hfq protein AA042_RS12875 PF01926 50S ribosome-binding GTPase AA042_RS12875 PF13167 GTP-binding GTPase N-terminal AA042_RS12875 PF16360 GTP-binding GTPase Middle Region AA042_RS12880 PF01145 SPFH domain / Band 7 family AA042_RS12880 PF12221 Bacterial membrane protein N terminal AA042_RS12885 PF01145 SPFH domain / Band 7 family AA042_RS12890 PF13393 Histidyl-tRNA synthetase AA042_RS12895 PF00709 Adenylosuccinate synthetase AA042_RS12900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS12900 PF00672 HAMP domain AA042_RS12900 PF17200 Single Cache domain 2 AA042_RS12905 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS12910 PF01547 Bacterial extracellular solute-binding protein AA042_RS12915 PF03150 Di-haem cytochrome c peroxidase AA042_RS12920 PF07715 TonB-dependent Receptor Plug Domain AA042_RS12930 PF08281 Sigma-70, region 4 AA042_RS12930 PF04542 Sigma-70 region 2 AA042_RS12945 PF00773 RNB domain AA042_RS12945 PF17876 Cold shock domain AA042_RS12945 PF00575 S1 RNA binding domain AA042_RS12945 PF08461 Ribonuclease R winged-helix domain AA042_RS12945 PF08206 Ribonuclease B OB domain AA042_RS12950 PF00588 SpoU rRNA Methylase family AA042_RS12950 PF08032 RNA 2'-O ribose methyltransferase substrate binding AA042_RS12955 PF01250 Ribosomal protein S6 AA042_RS12960 PF01084 Ribosomal protein S18 AA042_RS12970 PF01281 Ribosomal protein L9, N-terminal domain AA042_RS12970 PF03948 Ribosomal protein L9, C-terminal domain AA042_RS12975 PF00772 DnaB-like helicase N terminal domain AA042_RS12975 PF03796 DnaB-like helicase C terminal domain AA042_RS12995 PF08497 Radical SAM N-terminal AA042_RS12995 PF04055 Radical SAM superfamily AA042_RS12995 PF11842 Domain of unknown function (DUF3362) AA042_RS13005 PF00127 Copper binding proteins, plastocyanin/azurin family AA042_RS13015 PF02540 NAD synthase AA042_RS13020 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AA042_RS13020 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AA042_RS13025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS13025 PF03466 LysR substrate binding domain AA042_RS13030 PF00171 Aldehyde dehydrogenase family AA042_RS13035 PF01266 FAD dependent oxidoreductase AA042_RS13040 PF13458 Periplasmic binding protein AA042_RS13045 PF02653 Branched-chain amino acid transport system / permease component AA042_RS13050 PF11862 Domain of unknown function (DUF3382) AA042_RS13050 PF02653 Branched-chain amino acid transport system / permease component AA042_RS13055 PF00005 ABC transporter AA042_RS13055 PF12399 Branched-chain amino acid ATP-binding cassette transporter AA042_RS13060 PF00005 ABC transporter AA042_RS13065 PF00106 short chain dehydrogenase AA042_RS13075 PF02492 CobW/HypB/UreG, nucleotide-binding domain AA042_RS13080 PF01730 UreF AA042_RS13085 PF02814 UreE urease accessory protein, N-terminal domain AA042_RS13085 PF05194 UreE urease accessory protein, C-terminal domain AA042_RS13090 PF00440 Bacterial regulatory proteins, tetR family AA042_RS13100 PF05170 AsmA family AA042_RS13110 PF00892 EamA-like transporter family AA042_RS13115 PF02311 AraC-like ligand binding domain AA042_RS13115 PF12833 Helix-turn-helix domain AA042_RS13120 PF07769 psiF repeat AA042_RS13130 PF00012 Hsp70 protein AA042_RS13135 PF01556 DnaJ C terminal domain AA042_RS13135 PF00226 DnaJ domain AA042_RS13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS13145 PF08446 PAS fold AA042_RS13145 PF01590 GAF domain AA042_RS13145 PF00360 Phytochrome region AA042_RS13145 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS13160 PF00449 Urease alpha-subunit, N-terminal domain AA042_RS13160 PF01979 Amidohydrolase family AA042_RS13165 PF00699 Urease beta subunit AA042_RS13170 PF13673 Acetyltransferase (GNAT) domain AA042_RS13180 PF00547 Urease, gamma subunit AA042_RS13185 PF01774 UreD urease accessory protein AA042_RS13195 PF00005 ABC transporter AA042_RS13205 PF02653 Branched-chain amino acid transport system / permease component AA042_RS13220 PF01032 FecCD transport family AA042_RS13235 PF00593 TonB dependent receptor AA042_RS13235 PF07715 TonB-dependent Receptor Plug Domain AA042_RS13245 PF00593 TonB dependent receptor AA042_RS13245 PF07715 TonB-dependent Receptor Plug Domain AA042_RS13270 PF05973 Phage derived protein Gp49-like (DUF891) AA042_RS13275 PF02571 Precorrin-6x reductase CbiJ/CobK AA042_RS13295 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AA042_RS13295 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AA042_RS13300 PF02570 Precorrin-8X methylmutase AA042_RS13305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AA042_RS13310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AA042_RS13330 PF01914 MarC family integral membrane protein AA042_RS13335 PF00072 Response regulator receiver domain AA042_RS13335 PF01627 Hpt domain AA042_RS13335 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS13335 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA042_RS13335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS13335 PF00672 HAMP domain AA042_RS13340 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AA042_RS13340 PF02844 Phosphoribosylglycinamide synthetase, N domain AA042_RS13340 PF02843 Phosphoribosylglycinamide synthetase, C domain AA042_RS13345 PF02142 MGS-like domain AA042_RS13345 PF01808 AICARFT/IMPCHase bienzyme AA042_RS13350 PF02954 Bacterial regulatory protein, Fis family AA042_RS13355 PF01207 Dihydrouridine synthase (Dus) AA042_RS13390 PF00289 Biotin carboxylase, N-terminal domain AA042_RS13390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AA042_RS13390 PF02785 Biotin carboxylase C-terminal domain AA042_RS13395 PF00364 Biotin-requiring enzyme AA042_RS13400 PF01220 Dehydroquinase class II AA042_RS13405 PF11412 Disulphide bond corrector protein DsbC AA042_RS13405 PF02683 Cytochrome C biogenesis protein transmembrane region AA042_RS13410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS13415 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS13415 PF00072 Response regulator receiver domain AA042_RS13425 PF00293 NUDIX domain AA042_RS13430 PF01253 Translation initiation factor SUI1 AA042_RS13435 PF17944 Arginine decarboxylase C-terminal helical extension AA042_RS13435 PF17810 Arginine decarboxylase helical bundle domain AA042_RS13435 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AA042_RS13440 PF01554 MatE AA042_RS13445 PF17962 Bacterial macroglobulin domain 6 AA042_RS13445 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AA042_RS13445 PF01835 MG2 domain AA042_RS13445 PF07703 Alpha-2-macroglobulin bait region domain AA042_RS13445 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AA042_RS13445 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AA042_RS13445 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AA042_RS13445 PF00207 Alpha-2-macroglobulin family AA042_RS13445 PF07678 A-macroglobulin TED domain AA042_RS13455 PF00905 Penicillin binding protein transpeptidase domain AA042_RS13455 PF06832 Penicillin-Binding Protein C-terminus Family AA042_RS13455 PF00912 Transglycosylase AA042_RS13465 PF08479 POTRA domain, ShlB-type AA042_RS13465 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AA042_RS13470 PF00072 Response regulator receiver domain AA042_RS13470 PF00196 Bacterial regulatory proteins, luxR family AA042_RS13495 PF00437 Type II/IV secretion system protein AA042_RS13520 PF00196 Bacterial regulatory proteins, luxR family AA042_RS13520 PF00072 Response regulator receiver domain AA042_RS13535 PF08448 PAS fold AA042_RS13535 PF08447 PAS fold AA042_RS13535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS13555 PF13847 Methyltransferase domain AA042_RS13575 PF00108 Thiolase, N-terminal domain AA042_RS13575 PF02803 Thiolase, C-terminal domain AA042_RS13580 PF13593 SBF-like CPA transporter family (DUF4137) AA042_RS13585 PF02311 AraC-like ligand binding domain AA042_RS13585 PF12833 Helix-turn-helix domain AA042_RS13595 PF00753 Metallo-beta-lactamase superfamily AA042_RS13615 PF00376 MerR family regulatory protein AA042_RS13615 PF09278 MerR, DNA binding AA042_RS13620 PF00403 Heavy-metal-associated domain AA042_RS13635 PF07690 Major Facilitator Superfamily AA042_RS13640 PF08240 Alcohol dehydrogenase GroES-like domain AA042_RS13640 PF00107 Zinc-binding dehydrogenase AA042_RS13645 PF03466 LysR substrate binding domain AA042_RS13645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS13650 PF00962 Adenosine/AMP deaminase AA042_RS13665 PF01205 Uncharacterized protein family UPF0029 AA042_RS13670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS13670 PF03466 LysR substrate binding domain AA042_RS13675 PF00202 Aminotransferase class-III AA042_RS13680 PF00171 Aldehyde dehydrogenase family AA042_RS13745 PF17946 RecC C-terminal domain AA042_RS13750 PF13361 UvrD-like helicase C-terminal domain AA042_RS13750 PF12705 PD-(D/E)XK nuclease superfamily AA042_RS13750 PF00580 UvrD/REP helicase N-terminal domain AA042_RS13765 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS13765 PF17152 Periplasmic sensor domain AA042_RS13770 PF01389 OmpA-like transmembrane domain AA042_RS13770 PF00691 OmpA family AA042_RS13780 PF01320 Colicin immunity protein / pyocin immunity protein AA042_RS13795 PF00171 Aldehyde dehydrogenase family AA042_RS13805 PF00324 Amino acid permease AA042_RS13810 PF03466 LysR substrate binding domain AA042_RS13810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS13825 PF02525 Flavodoxin-like fold AA042_RS13830 PF03466 LysR substrate binding domain AA042_RS13830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS13840 PF01740 STAS domain AA042_RS13840 PF00916 Sulfate permease family AA042_RS13855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS13855 PF00672 HAMP domain AA042_RS13855 PF16591 Helical bimodular sensor domain AA042_RS13885 PF05154 TM2 domain AA042_RS13925 PF02342 TerD domain AA042_RS13935 PF05099 Tellurite resistance protein TerB AA042_RS13940 PF03741 Integral membrane protein TerC family AA042_RS13945 PF02342 TerD domain AA042_RS13950 PF02342 TerD domain AA042_RS13955 PF05638 Type VI secretion system effector, Hcp AA042_RS13960 PF00483 Nucleotidyl transferase AA042_RS13965 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AA042_RS13975 PF08447 PAS fold AA042_RS13975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS13980 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS13980 PF00563 EAL domain AA042_RS13980 PF03707 Bacterial signalling protein N terminal repeat AA042_RS14015 PF02796 Helix-turn-helix domain of resolvase AA042_RS14015 PF00239 Resolvase, N terminal domain AA042_RS14060 PF13356 Arm DNA-binding domain AA042_RS14060 PF00589 Phage integrase family AA042_RS14080 PF11953 Domain of unknown function (DUF3470) AA042_RS14080 PF00037 4Fe-4S binding domain AA042_RS14085 PF02589 LUD domain AA042_RS14090 PF11870 Domain of unknown function (DUF3390) AA042_RS14090 PF13183 4Fe-4S dicluster domain AA042_RS14090 PF02589 LUD domain AA042_RS14095 PF02754 Cysteine-rich domain AA042_RS14100 PF02652 L-lactate permease AA042_RS14105 PF00392 Bacterial regulatory proteins, gntR family AA042_RS14105 PF07729 FCD domain AA042_RS14110 PF01668 SmpB protein AA042_RS14115 PF00209 Sodium:neurotransmitter symporter family AA042_RS14120 PF03364 Polyketide cyclase / dehydrase and lipid transport AA042_RS14125 PF03658 RnfH family Ubiquitin AA042_RS14130 PF04355 SmpA / OmlA family AA042_RS14135 PF01475 Ferric uptake regulator family AA042_RS14140 PF02463 RecF/RecN/SMC N terminal domain AA042_RS14145 PF01025 GrpE AA042_RS14150 PF00012 Hsp70 protein AA042_RS14155 PF00226 DnaJ domain AA042_RS14155 PF00684 DnaJ central domain AA042_RS14155 PF01556 DnaJ C terminal domain AA042_RS14160 PF05173 Dihydrodipicolinate reductase, C-terminus AA042_RS14160 PF01113 Dihydrodipicolinate reductase, N-terminus AA042_RS14165 PF00117 Glutamine amidotransferase class-I AA042_RS14165 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AA042_RS14170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AA042_RS14170 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AA042_RS14170 PF02142 MGS-like domain AA042_RS14175 PF03449 Transcription elongation factor, N-terminal AA042_RS14175 PF01272 Transcription elongation factor, GreA/GreB, C-term AA042_RS14185 PF01985 CRS1 / YhbY (CRM) domain AA042_RS14190 PF01728 FtsJ-like methyltransferase AA042_RS14195 PF01434 Peptidase family M41 AA042_RS14195 PF06480 FtsH Extracellular AA042_RS14195 PF00004 ATPase family associated with various cellular activities (AAA) AA042_RS14195 PF17862 AAA+ lid domain AA042_RS14200 PF00809 Pterin binding enzyme AA042_RS14205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AA042_RS14205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AA042_RS14205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AA042_RS14205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AA042_RS14210 PF00121 Triosephosphate isomerase AA042_RS14215 PF03840 Preprotein translocase SecG subunit AA042_RS14230 PF02576 RimP N-terminal domain AA042_RS14230 PF17384 RimP C-terminal SH3 domain AA042_RS14235 PF13184 NusA-like KH domain AA042_RS14235 PF08529 NusA N-terminal domain AA042_RS14235 PF00575 S1 RNA binding domain AA042_RS14240 PF04760 Translation initiation factor IF-2, N-terminal region AA042_RS14240 PF08364 Bacterial translation initiation factor IF-2 associated region AA042_RS14240 PF00009 Elongation factor Tu GTP binding domain AA042_RS14240 PF11987 Translation-initiation factor 2 AA042_RS14245 PF02033 Ribosome-binding factor A AA042_RS14250 PF16198 tRNA pseudouridylate synthase B C-terminal domain AA042_RS14250 PF09157 Pseudouridine synthase II TruB, C-terminal AA042_RS14250 PF01509 TruB family pseudouridylate synthase (N terminal domain) AA042_RS14255 PF00312 Ribosomal protein S15 AA042_RS14260 PF01138 3' exoribonuclease family, domain 1 AA042_RS14260 PF03725 3' exoribonuclease family, domain 2 AA042_RS14260 PF00575 S1 RNA binding domain AA042_RS14260 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AA042_RS14260 PF00013 KH domain AA042_RS14265 PF04972 BON domain AA042_RS14275 PF17785 PUA-like domain AA042_RS14275 PF10672 S-adenosylmethionine-dependent methyltransferase AA042_RS14280 PF00108 Thiolase, N-terminal domain AA042_RS14280 PF02803 Thiolase, C-terminal domain AA042_RS14290 PF00342 Phosphoglucose isomerase AA042_RS14295 PF02569 Pantoate-beta-alanine ligase AA042_RS14300 PF02548 Ketopantoate hydroxymethyltransferase AA042_RS14315 PF00072 Response regulator receiver domain AA042_RS14315 PF00158 Sigma-54 interaction domain AA042_RS14315 PF02954 Bacterial regulatory protein, Fis family AA042_RS14320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS14320 PF00989 PAS fold AA042_RS14320 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS14320 PF08447 PAS fold AA042_RS14325 PF00749 tRNA synthetases class I (E and Q), catalytic domain AA042_RS14330 PF01258 Prokaryotic dksA/traR C4-type zinc finger AA042_RS14335 PF00155 Aminotransferase class I and II AA042_RS14340 PF03749 Sugar fermentation stimulation protein RE domain AA042_RS14340 PF17746 SfsA N-terminal OB domain AA042_RS14350 PF01497 Periplasmic binding protein AA042_RS14360 PF00005 ABC transporter AA042_RS14380 PF00905 Penicillin binding protein transpeptidase domain AA042_RS14380 PF14814 Bifunctional transglycosylase second domain AA042_RS14380 PF00912 Transglycosylase AA042_RS14390 PF04287 tRNA pseudouridine synthase C AA042_RS14395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AA042_RS14395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AA042_RS14395 PF00205 Thiamine pyrophosphate enzyme, central domain AA042_RS14400 PF10369 Small subunit of acetolactate synthase AA042_RS14405 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AA042_RS14405 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AA042_RS14410 PF01066 CDP-alcohol phosphatidyltransferase AA042_RS14415 PF00174 Oxidoreductase molybdopterin binding domain AA042_RS14420 PF01794 Ferric reductase like transmembrane component AA042_RS14455 PF04403 Paraquat-inducible protein A AA042_RS14460 PF04403 Paraquat-inducible protein A AA042_RS14465 PF02470 MlaD protein AA042_RS14470 PF00419 Fimbrial protein AA042_RS14480 PF00577 Outer membrane usher protein AA042_RS14480 PF13953 PapC C-terminal domain AA042_RS14480 PF13954 PapC N-terminal domain AA042_RS14485 PF02753 Pili assembly chaperone PapD, C-terminal domain AA042_RS14485 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AA042_RS14490 PF00419 Fimbrial protein AA042_RS14520 PF01627 Hpt domain AA042_RS14520 PF00072 Response regulator receiver domain AA042_RS14520 PF00989 PAS fold AA042_RS14520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS14520 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS14520 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA042_RS14525 PF00196 Bacterial regulatory proteins, luxR family AA042_RS14525 PF00072 Response regulator receiver domain AA042_RS14550 PF00583 Acetyltransferase (GNAT) family AA042_RS14560 PF00484 Carbonic anhydrase AA042_RS14565 PF02667 Short chain fatty acid transporter AA042_RS14580 PF08447 PAS fold AA042_RS14580 PF13426 PAS domain AA042_RS14580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS14590 PF09456 RcsC Alpha-Beta-Loop (ABL) AA042_RS14590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS14590 PF00072 Response regulator receiver domain AA042_RS14590 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS14595 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS14595 PF03707 Bacterial signalling protein N terminal repeat AA042_RS14595 PF13188 PAS domain AA042_RS14595 PF00563 EAL domain AA042_RS14600 PF09456 RcsC Alpha-Beta-Loop (ABL) AA042_RS14600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS14600 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS14600 PF00072 Response regulator receiver domain AA042_RS14605 PF00196 Bacterial regulatory proteins, luxR family AA042_RS14605 PF00072 Response regulator receiver domain AA042_RS14610 PF02753 Pili assembly chaperone PapD, C-terminal domain AA042_RS14610 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AA042_RS14620 PF13953 PapC C-terminal domain AA042_RS14620 PF13954 PapC N-terminal domain AA042_RS14620 PF00577 Outer membrane usher protein AA042_RS14625 PF02753 Pili assembly chaperone PapD, C-terminal domain AA042_RS14625 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AA042_RS14640 PF00106 short chain dehydrogenase AA042_RS14655 PF07690 Major Facilitator Superfamily AA042_RS14665 PF06071 Protein of unknown function (DUF933) AA042_RS14665 PF01926 50S ribosome-binding GTPase AA042_RS14670 PF01195 Peptidyl-tRNA hydrolase AA042_RS14675 PF01386 Ribosomal L25p family AA042_RS14675 PF14693 Ribosomal protein TL5, C-terminal domain AA042_RS14680 PF14572 Phosphoribosyl synthetase-associated domain AA042_RS14680 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AA042_RS14690 PF08544 GHMP kinases C terminal AA042_RS14690 PF00288 GHMP kinases N terminal domain AA042_RS14695 PF03550 Outer membrane lipoprotein LolB AA042_RS14705 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AA042_RS14705 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AA042_RS14705 PF01488 Shikimate / quinate 5-dehydrogenase AA042_RS14715 PF05175 Methyltransferase small domain AA042_RS14715 PF17827 PrmC N-terminal domain AA042_RS14720 PF00899 ThiF family AA042_RS14725 PF01177 Asp/Glu/Hydantoin racemase AA042_RS14730 PF09411 Lipid A 3-O-deacylase (PagL) AA042_RS14755 PF01593 Flavin containing amine oxidoreductase AA042_RS14755 PF02027 RolB/RolC glucosidase family AA042_RS14760 PF00106 short chain dehydrogenase AA042_RS14765 PF03441 FAD binding domain of DNA photolyase AA042_RS14765 PF00875 DNA photolyase AA042_RS14770 PF13411 MerR HTH family regulatory protein AA042_RS14780 PF01593 Flavin containing amine oxidoreductase AA042_RS14790 PF00762 Ferrochelatase AA042_RS14795 PF00860 Permease family AA042_RS14820 PF02627 Carboxymuconolactone decarboxylase family AA042_RS14825 PF01699 Sodium/calcium exchanger protein AA042_RS14830 PF03330 Lytic transglycolase AA042_RS14835 PF02637 GatB domain AA042_RS14835 PF02934 GatB/GatE catalytic domain AA042_RS14840 PF01425 Amidase AA042_RS14845 PF02686 Glu-tRNAGln amidotransferase C subunit AA042_RS14855 PF04085 rod shape-determining protein MreC AA042_RS14865 PF02545 Maf-like protein AA042_RS14870 PF00575 S1 RNA binding domain AA042_RS14870 PF10150 Ribonuclease E/G family AA042_RS14880 PF00795 Carbon-nitrogen hydrolase AA042_RS14885 PF01523 Putative modulator of DNA gyrase AA042_RS14890 PF04751 Protein of unknown function (DUF615) AA042_RS14895 PF01523 Putative modulator of DNA gyrase AA042_RS14905 PF00206 Lyase AA042_RS14905 PF10415 Fumarase C C-terminus AA042_RS14915 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AA042_RS14915 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AA042_RS14920 PF02535 ZIP Zinc transporter AA042_RS14925 PF00381 PTS HPr component phosphorylation site AA042_RS14930 PF03668 P-loop ATPase protein family AA042_RS14935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AA042_RS14940 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AA042_RS14945 PF00309 Sigma-54 factor, Activator interacting domain (AID) AA042_RS14945 PF04963 Sigma-54 factor, core binding domain AA042_RS14945 PF04552 Sigma-54, DNA binding domain AA042_RS14950 PF12399 Branched-chain amino acid ATP-binding cassette transporter AA042_RS14950 PF00005 ABC transporter AA042_RS14955 PF03968 OstA-like protein AA042_RS14970 PF00571 CBS domain AA042_RS14970 PF01380 SIS domain AA042_RS14975 PF00005 ABC transporter AA042_RS14980 PF02405 Permease MlaE AA042_RS14985 PF02470 MlaD protein AA042_RS14990 PF05494 MlaC protein AA042_RS15005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AA042_RS15010 PF01634 ATP phosphoribosyltransferase AA042_RS15015 PF00815 Histidinol dehydrogenase AA042_RS15020 PF00155 Aminotransferase class I and II AA042_RS15025 PF13180 PDZ domain AA042_RS15030 PF01784 NIF3 (NGG1p interacting factor 3) AA042_RS15035 PF01507 Phosphoadenosine phosphosulfate reductase family AA042_RS15040 PF00009 Elongation factor Tu GTP binding domain AA042_RS15045 PF01553 Acyltransferase AA042_RS15060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AA042_RS15065 PF00255 Glutathione peroxidase AA042_RS15070 PF13439 Glycosyltransferase Family 4 AA042_RS15070 PF00534 Glycosyl transferases group 1 AA042_RS15080 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA042_RS15120 PF02152 Dihydroneopterin aldolase AA042_RS15125 PF01227 GTP cyclohydrolase I AA042_RS15140 PF13411 MerR HTH family regulatory protein AA042_RS15150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS15150 PF00072 Response regulator receiver domain AA042_RS15150 PF13426 PAS domain AA042_RS15155 PF00258 Flavodoxin AA042_RS15160 PF03466 LysR substrate binding domain AA042_RS15160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS15165 PF03788 LrgA family AA042_RS15170 PF04172 LrgB-like family AA042_RS15190 PF04209 homogentisate 1,2-dioxygenase AA042_RS15195 PF01557 Fumarylacetoacetate (FAA) hydrolase family AA042_RS15200 PF13417 Glutathione S-transferase, N-terminal domain AA042_RS15215 PF06146 Phosphate-starvation-inducible E AA042_RS15225 PF07715 TonB-dependent Receptor Plug Domain AA042_RS15225 PF07660 Secretin and TonB N terminus short domain AA042_RS15225 PF00593 TonB dependent receptor AA042_RS15230 PF04773 FecR protein AA042_RS15230 PF16220 Domain of unknown function (DUF4880) AA042_RS15235 PF04542 Sigma-70 region 2 AA042_RS15235 PF08281 Sigma-70, region 4 AA042_RS15250 PF07715 TonB-dependent Receptor Plug Domain AA042_RS15255 PF12833 Helix-turn-helix domain AA042_RS15265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AA042_RS15265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AA042_RS15270 PF03466 LysR substrate binding domain AA042_RS15270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS15280 PF04632 Fusaric acid resistance protein family AA042_RS15290 PF00529 HlyD membrane-fusion protein of T1SS AA042_RS15290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AA042_RS15305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS15305 PF03466 LysR substrate binding domain AA042_RS15310 PF00106 short chain dehydrogenase AA042_RS15325 PF11182 Alginate O-acetyl transferase AlgF AA042_RS15330 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX AA042_RS15335 PF03062 MBOAT, membrane-bound O-acyltransferase family AA042_RS15340 PF05426 Alginate lyase AA042_RS15345 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX AA042_RS15345 PF16824 C-terminal carbohydrate-binding module AA042_RS15350 PF05048 Periplasmic copper-binding protein (NosD) AA042_RS15355 PF13372 Alginate export AA042_RS15360 PF08238 Sel1 repeat AA042_RS15365 PF07238 PilZ domain AA042_RS15380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AA042_RS15380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AA042_RS15380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AA042_RS15385 PF03883 Peroxide stress protein YaaA AA042_RS15400 PF02562 PhoH-like protein AA042_RS15400 PF13638 PIN domain AA042_RS15405 PF04717 Type VI secretion system, phage-baseplate injector AA042_RS15405 PF16671 Actin cross-linking domain AA042_RS15440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AA042_RS15440 PF00529 HlyD membrane-fusion protein of T1SS AA042_RS15450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS15450 PF03466 LysR substrate binding domain AA042_RS15455 PF01872 RibD C-terminal domain AA042_RS15455 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AA042_RS15465 PF00925 GTP cyclohydrolase II AA042_RS15470 PF12867 DinB superfamily AA042_RS15470 PF03781 Sulfatase-modifying factor enzyme 1 AA042_RS15485 PF01967 MoaC family AA042_RS15490 PF02597 ThiS family AA042_RS15495 PF02391 MoaE protein AA042_RS15525 PF02230 Phospholipase/Carboxylesterase AA042_RS15535 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA042_RS15540 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS15545 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS15550 PF00005 ABC transporter AA042_RS15555 PF07690 Major Facilitator Superfamily AA042_RS15565 PF01541 GIY-YIG catalytic domain AA042_RS15575 PF04245 37-kD nucleoid-associated bacterial protein AA042_RS15580 PF00216 Bacterial DNA-binding protein AA042_RS15585 PF05971 RNA methyltransferase AA042_RS15590 PF08264 Anticodon-binding domain of tRNA AA042_RS15590 PF10458 Valyl tRNA synthetase tRNA binding arm AA042_RS15590 PF00133 tRNA synthetases class I (I, L, M and V) AA042_RS15600 PF04364 DNA polymerase III chi subunit, HolC AA042_RS15605 PF00883 Cytosol aminopeptidase family, catalytic domain AA042_RS15605 PF02789 Cytosol aminopeptidase family, N-terminal domain AA042_RS15610 PF03739 Lipopolysaccharide export system permease LptF/LptG AA042_RS15615 PF03739 Lipopolysaccharide export system permease LptF/LptG AA042_RS15620 PF03144 Elongation factor Tu domain 2 AA042_RS15620 PF00679 Elongation factor G C-terminus AA042_RS15620 PF06421 GTP-binding protein LepA C-terminus AA042_RS15620 PF00009 Elongation factor Tu GTP binding domain AA042_RS15625 PF10502 Signal peptidase, peptidase S26 AA042_RS15630 PF14622 Ribonuclease-III-like AA042_RS15630 PF00035 Double-stranded RNA binding motif AA042_RS15635 PF01926 50S ribosome-binding GTPase AA042_RS15635 PF07650 KH domain AA042_RS15640 PF02565 Recombination protein O C terminal AA042_RS15640 PF11967 Recombination protein O N terminal AA042_RS15650 PF01464 Transglycosylase SLT domain AA042_RS15650 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA042_RS15655 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AA042_RS15655 PF02769 AIR synthase related protein, C-terminal domain AA042_RS15655 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AA042_RS15660 PF01784 NIF3 (NGG1p interacting factor 3) AA042_RS15670 PF00293 NUDIX domain AA042_RS15670 PF09297 NADH pyrophosphatase zinc ribbon domain AA042_RS15675 PF00293 NUDIX domain AA042_RS15680 PF00132 Bacterial transferase hexapeptide (six repeats) AA042_RS15695 PF02222 ATP-grasp domain AA042_RS15700 PF07690 Major Facilitator Superfamily AA042_RS15700 PF00083 Sugar (and other) transporter AA042_RS15705 PF03471 Transporter associated domain AA042_RS15705 PF01595 Cyclin M transmembrane N-terminal domain AA042_RS15705 PF00571 CBS domain AA042_RS15715 PF02978 Signal peptide binding domain AA042_RS15715 PF02881 SRP54-type protein, helical bundle domain AA042_RS15715 PF00448 SRP54-type protein, GTPase domain AA042_RS15720 PF00886 Ribosomal protein S16 AA042_RS15725 PF01782 RimM N-terminal domain AA042_RS15725 PF05239 PRC-barrel domain AA042_RS15730 PF01746 tRNA (Guanine-1)-methyltransferase AA042_RS15735 PF01245 Ribosomal protein L19 AA042_RS15740 PF03061 Thioesterase superfamily AA042_RS15750 PF02899 Phage integrase, N-terminal SAM-like domain AA042_RS15750 PF00589 Phage integrase family AA042_RS15755 PF10411 Disulfide bond isomerase protein N-terminus AA042_RS15755 PF13098 Thioredoxin-like domain AA042_RS15760 PF01842 ACT domain AA042_RS15760 PF03447 Homoserine dehydrogenase, NAD binding domain AA042_RS15760 PF00742 Homoserine dehydrogenase AA042_RS15765 PF14821 Threonine synthase N terminus AA042_RS15765 PF00291 Pyridoxal-phosphate dependent enzyme AA042_RS15770 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA042_RS15770 PF00072 Response regulator receiver domain AA042_RS15770 PF00989 PAS fold AA042_RS15770 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS15770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS15770 PF01627 Hpt domain AA042_RS15785 PF02515 CoA-transferase family III AA042_RS15790 PF07152 YaeQ protein AA042_RS15795 PF02272 DHHA1 domain AA042_RS15795 PF01368 DHH family AA042_RS15795 PF17768 RecJ OB domain AA042_RS15815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS15815 PF02743 Cache domain AA042_RS15815 PF00672 HAMP domain AA042_RS15825 PF01739 CheR methyltransferase, SAM binding domain AA042_RS15830 PF01584 CheW-like domain AA042_RS15840 PF01339 CheB methylesterase AA042_RS15840 PF00072 Response regulator receiver domain AA042_RS15845 PF00360 Phytochrome region AA042_RS15845 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS15845 PF01590 GAF domain AA042_RS15845 PF00563 EAL domain AA042_RS15860 PF01336 OB-fold nucleic acid binding domain AA042_RS15860 PF00152 tRNA synthetases class II (D, K and N) AA042_RS15880 PF12146 Serine aminopeptidase, S33 AA042_RS15890 PF05736 OprF membrane domain AA042_RS15890 PF00691 OmpA family AA042_RS15900 PF00311 Phosphoenolpyruvate carboxylase AA042_RS15905 PF05191 Adenylate kinase, active site lid AA042_RS15910 PF00814 Glycoprotease family AA042_RS15930 PF04445 Putative SAM-dependent methyltransferase AA042_RS15940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AA042_RS15955 PF01553 Acyltransferase AA042_RS15960 PF00313 'Cold-shock' DNA-binding domain AA042_RS15970 PF13847 Methyltransferase domain AA042_RS15975 PF07687 Peptidase dimerisation domain AA042_RS15975 PF01546 Peptidase family M20/M25/M40 AA042_RS15990 PF02657 Fe-S metabolism associated domain AA042_RS15995 PF00266 Aminotransferase class-V AA042_RS16000 PF14602 Hexapeptide repeat of succinyl-transferase AA042_RS16000 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AA042_RS16005 PF03960 ArsC family AA042_RS16010 PF00999 Sodium/hydrogen exchanger family AA042_RS16015 PF00155 Aminotransferase class I and II AA042_RS16020 PF01966 HD domain AA042_RS16020 PF08335 GlnD PII-uridylyltransferase AA042_RS16020 PF01909 Nucleotidyltransferase domain AA042_RS16025 PF00557 Metallopeptidase family M24 AA042_RS16030 PF00318 Ribosomal protein S2 AA042_RS16035 PF00889 Elongation factor TS AA042_RS16040 PF00696 Amino acid kinase family AA042_RS16045 PF01765 Ribosome recycling factor AA042_RS16050 PF01255 Putative undecaprenyl diphosphate synthase AA042_RS16060 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AA042_RS16060 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AA042_RS16060 PF13288 DXP reductoisomerase C-terminal domain AA042_RS16065 PF02163 Peptidase family M50 AA042_RS16065 PF17820 PDZ domain AA042_RS16065 PF13180 PDZ domain AA042_RS16070 PF07244 Surface antigen variable number repeat AA042_RS16070 PF01103 Surface antigen AA042_RS16075 PF03938 Outer membrane protein (OmpH-like) AA042_RS16080 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AA042_RS16080 PF00132 Bacterial transferase hexapeptide (six repeats) AA042_RS16085 PF07977 FabA-like domain AA042_RS16090 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AA042_RS16090 PF00132 Bacterial transferase hexapeptide (six repeats) AA042_RS16095 PF02684 Lipid-A-disaccharide synthetase AA042_RS16100 PF01351 Ribonuclease HII AA042_RS16105 PF07733 Bacterial DNA polymerase III alpha NTPase domain AA042_RS16105 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AA042_RS16105 PF14579 Helix-hairpin-helix motif AA042_RS16105 PF02811 PHP domain AA042_RS16105 PF01336 OB-fold nucleic acid binding domain AA042_RS16110 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AA042_RS16115 PF09179 TilS substrate binding domain AA042_RS16115 PF11734 TilS substrate C-terminal domain AA042_RS16115 PF01171 PP-loop family AA042_RS16120 PF06418 CTP synthase N-terminus AA042_RS16120 PF00117 Glutamine amidotransferase class-I AA042_RS16125 PF00793 DAHP synthetase I family AA042_RS16130 PF00113 Enolase, C-terminal TIM barrel domain AA042_RS16130 PF03952 Enolase, N-terminal domain AA042_RS16135 PF04977 Septum formation initiator AA042_RS16140 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AA042_RS16145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS16145 PF03466 LysR substrate binding domain AA042_RS16150 PF00107 Zinc-binding dehydrogenase AA042_RS16150 PF08240 Alcohol dehydrogenase GroES-like domain AA042_RS16155 PF00756 Putative esterase AA042_RS16160 PF02542 YgbB family AA042_RS16165 PF01142 tRNA pseudouridine synthase D (TruD) AA042_RS16170 PF01975 Survival protein SurE AA042_RS16180 PF01476 LysM domain AA042_RS16180 PF01551 Peptidase family M23 AA042_RS16185 PF04545 Sigma-70, region 4 AA042_RS16185 PF00140 Sigma-70 factor, region 1.2 AA042_RS16185 PF04539 Sigma-70 region 3 AA042_RS16185 PF04542 Sigma-70 region 2 AA042_RS16190 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AA042_RS16195 PF07690 Major Facilitator Superfamily AA042_RS16210 PF01553 Acyltransferase AA042_RS16225 PF13091 PLD-like domain AA042_RS16235 PF03707 Bacterial signalling protein N terminal repeat AA042_RS16235 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS16235 PF00563 EAL domain AA042_RS16245 PF00561 alpha/beta hydrolase fold AA042_RS16250 PF01479 S4 domain AA042_RS16250 PF00849 RNA pseudouridylate synthase AA042_RS16260 PF03167 Uracil DNA glycosylase superfamily AA042_RS16290 PF05145 Transition state regulatory protein AbrB AA042_RS16295 PF01970 Tripartite tricarboxylate transporter TctA family AA042_RS16310 PF00072 Response regulator receiver domain AA042_RS16310 PF00486 Transcriptional regulatory protein, C terminal AA042_RS16315 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS16315 PF08521 Two-component sensor kinase N-terminal AA042_RS16315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS16330 PF03937 Flavinator of succinate dehydrogenase AA042_RS16375 PF02910 Fumarate reductase flavoprotein C-term AA042_RS16375 PF00890 FAD binding domain AA042_RS16380 PF04542 Sigma-70 region 2 AA042_RS16380 PF08281 Sigma-70, region 4 AA042_RS16385 PF03873 Anti sigma-E protein RseA, C-terminal domain AA042_RS16385 PF03872 Anti sigma-E protein RseA, N-terminal domain AA042_RS16390 PF03888 MucB/RseB N-terminal domain AA042_RS16390 PF17188 MucB/RseB C-terminal domain AA042_RS16395 PF13180 PDZ domain AA042_RS16405 PF00313 'Cold-shock' DNA-binding domain AA042_RS16410 PF01571 Aminomethyltransferase folate-binding domain AA042_RS16410 PF08669 Glycine cleavage T-protein C-terminal barrel domain AA042_RS16415 PF03313 Serine dehydratase alpha chain AA042_RS16415 PF03315 Serine dehydratase beta chain AA042_RS16425 PF01597 Glycine cleavage H-protein AA042_RS16440 PF00696 Amino acid kinase family AA042_RS16445 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AA042_RS16445 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AA042_RS16455 PF13520 Amino acid permease AA042_RS16465 PF04304 Protein of unknown function (DUF454) AA042_RS16470 PF01126 Heme oxygenase AA042_RS16475 PF07715 TonB-dependent Receptor Plug Domain AA042_RS16475 PF00593 TonB dependent receptor AA042_RS16480 PF16220 Domain of unknown function (DUF4880) AA042_RS16480 PF04773 FecR protein AA042_RS16485 PF04542 Sigma-70 region 2 AA042_RS16485 PF08281 Sigma-70, region 4 AA042_RS16490 PF02142 MGS-like domain AA042_RS16495 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AA042_RS16495 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AA042_RS16505 PF02685 Glucokinase AA042_RS16510 PF00486 Transcriptional regulatory protein, C terminal AA042_RS16510 PF00072 Response regulator receiver domain AA042_RS16515 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS16515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS16515 PF00672 HAMP domain AA042_RS16525 PF01547 Bacterial extracellular solute-binding protein AA042_RS16530 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS16535 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS16540 PF17912 MalK OB fold domain AA042_RS16540 PF00005 ABC transporter AA042_RS16545 PF04966 Carbohydrate-selective porin, OprB family AA042_RS16550 PF01263 Aldose 1-epimerase AA042_RS16555 PF01418 Helix-turn-helix domain, rpiR family AA042_RS16555 PF01380 SIS domain AA042_RS16560 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AA042_RS16560 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AA042_RS16565 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AA042_RS16570 PF01081 KDPG and KHG aldolase AA042_RS16580 PF12843 Putative quorum-sensing-regulated virulence factor AA042_RS16590 PF01575 MaoC like domain AA042_RS16595 PF12146 Serine aminopeptidase, S33 AA042_RS16600 PF13193 AMP-binding enzyme C-terminal domain AA042_RS16600 PF00501 AMP-binding enzyme AA042_RS16605 PF13193 AMP-binding enzyme C-terminal domain AA042_RS16605 PF00501 AMP-binding enzyme AA042_RS16620 PF03631 Virulence factor BrkB AA042_RS16625 PF01327 Polypeptide deformylase AA042_RS16635 PF13426 PAS domain AA042_RS16635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS16635 PF08447 PAS fold AA042_RS16645 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AA042_RS16645 PF00356 Bacterial regulatory proteins, lacI family AA042_RS16655 PF02447 GntP family permease AA042_RS16660 PF00155 Aminotransferase class I and II AA042_RS16670 PF07298 NnrU protein AA042_RS16675 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS16675 PF00360 Phytochrome region AA042_RS16675 PF08446 PAS fold AA042_RS16675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS16675 PF01590 GAF domain AA042_RS16685 PF03009 Glycerophosphoryl diester phosphodiesterase family AA042_RS16695 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS16695 PF05230 MASE2 domain AA042_RS16705 PF00268 Ribonucleotide reductase, small chain AA042_RS16720 PF16177 Acetyl-coenzyme A synthetase N-terminus AA042_RS16720 PF00501 AMP-binding enzyme AA042_RS16720 PF13193 AMP-binding enzyme C-terminal domain AA042_RS16725 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA042_RS16730 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS16735 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS16745 PF00005 ABC transporter AA042_RS16750 PF12833 Helix-turn-helix domain AA042_RS16765 PF04958 Arginine N-succinyltransferase beta subunit AA042_RS16770 PF04958 Arginine N-succinyltransferase beta subunit AA042_RS16775 PF00171 Aldehyde dehydrogenase family AA042_RS16780 PF04996 Succinylarginine dihydrolase AA042_RS16790 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AA042_RS16800 PF00885 6,7-dimethyl-8-ribityllumazine synthase AA042_RS16805 PF01212 Beta-eliminating lyase AA042_RS16810 PF01411 tRNA synthetases class II (A) AA042_RS16810 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AA042_RS16810 PF02272 DHHA1 domain AA042_RS16815 PF00696 Amino acid kinase family AA042_RS16815 PF01842 ACT domain AA042_RS16815 PF13840 ACT domain AA042_RS16820 PF02599 Global regulator protein family AA042_RS16845 PF00571 CBS domain AA042_RS16845 PF01769 Divalent cation transporter AA042_RS16845 PF03448 MgtE intracellular N domain AA042_RS16850 PF03869 Arc-like DNA binding domain AA042_RS16880 PF01037 Lrp/AsnC ligand binding domain AA042_RS16895 PF02423 Ornithine cyclodeaminase/mu-crystallin family AA042_RS16905 PF05638 Type VI secretion system effector, Hcp AA042_RS16925 PF07690 Major Facilitator Superfamily AA042_RS16930 PF07690 Major Facilitator Superfamily AA042_RS16935 PF05336 L-rhamnose mutarotase AA042_RS16950 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AA042_RS16950 PF13378 Enolase C-terminal domain-like AA042_RS16955 PF01557 Fumarylacetoacetate (FAA) hydrolase family AA042_RS16965 PF00392 Bacterial regulatory proteins, gntR family AA042_RS16965 PF07729 FCD domain AA042_RS16975 PF00328 Histidine phosphatase superfamily (branch 2) AA042_RS16980 PF06178 Oligogalacturonate-specific porin protein (KdgM) AA042_RS16985 PF07690 Major Facilitator Superfamily AA042_RS16995 PF00356 Bacterial regulatory proteins, lacI family AA042_RS17000 PF00120 Glutamine synthetase, catalytic domain AA042_RS17010 PF07238 PilZ domain AA042_RS17010 PF07317 Flagellar regulator YcgR AA042_RS17020 PF04316 Anti-sigma-28 factor, FlgM AA042_RS17030 PF01584 CheW-like domain AA042_RS17030 PF00072 Response regulator receiver domain AA042_RS17035 PF03705 CheR methyltransferase, all-alpha domain AA042_RS17035 PF01739 CheR methyltransferase, SAM binding domain AA042_RS17040 PF00460 Flagella basal body rod protein AA042_RS17045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AA042_RS17045 PF00460 Flagella basal body rod protein AA042_RS17055 PF07559 Flagellar basal body protein FlaE AA042_RS17055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AA042_RS17055 PF00460 Flagella basal body rod protein AA042_RS17060 PF02867 Ribonucleotide reductase, barrel domain AA042_RS17060 PF00317 Ribonucleotide reductase, all-alpha domain AA042_RS17060 PF03477 ATP cone domain AA042_RS17065 PF14310 Fibronectin type III-like domain AA042_RS17065 PF00933 Glycosyl hydrolase family 3 N terminal domain AA042_RS17065 PF01915 Glycosyl hydrolase family 3 C-terminal domain AA042_RS17070 PF04011 LemA family AA042_RS17090 PF01965 DJ-1/PfpI family AA042_RS17100 PF00593 TonB dependent receptor AA042_RS17100 PF07715 TonB-dependent Receptor Plug Domain AA042_RS17115 PF07411 Domain of unknown function (DUF1508) AA042_RS17120 PF00701 Dihydrodipicolinate synthetase family AA042_RS17125 PF00596 Class II Aldolase and Adducin N-terminal domain AA042_RS17130 PF08671 Anti-repressor SinI AA042_RS17130 PF01381 Helix-turn-helix AA042_RS17140 PF00465 Iron-containing alcohol dehydrogenase AA042_RS17145 PF05683 Fumarase C-terminus AA042_RS17145 PF05681 Fumarate hydratase (Fumerase) AA042_RS17160 PF00378 Enoyl-CoA hydratase/isomerase AA042_RS17165 PF00224 Pyruvate kinase, barrel domain AA042_RS17165 PF02887 Pyruvate kinase, alpha/beta domain AA042_RS17180 PF08411 Exonuclease C-terminal AA042_RS17180 PF00929 Exonuclease AA042_RS17190 PF00551 Formyl transferase AA042_RS17195 PF02743 Cache domain AA042_RS17195 PF00672 HAMP domain AA042_RS17195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS17200 PF05872 Bacterial protein of unknown function (DUF853) AA042_RS17210 PF07516 SecA Wing and Scaffold domain AA042_RS17210 PF01043 SecA preprotein cross-linking domain AA042_RS17210 PF02810 SEC-C motif AA042_RS17210 PF07517 SecA DEAD-like domain AA042_RS17215 PF01960 ArgJ family AA042_RS17220 PF00293 NUDIX domain AA042_RS17225 PF01923 Cobalamin adenosyltransferase AA042_RS17230 PF08448 PAS fold AA042_RS17230 PF00072 Response regulator receiver domain AA042_RS17230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS17230 PF13188 PAS domain AA042_RS17230 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS17235 PF08546 Ketopantoate reductase PanE/ApbA C terminal AA042_RS17235 PF02558 Ketopantoate reductase PanE/ApbA AA042_RS17240 PF04461 Protein of unknown function (DUF520) AA042_RS17245 PF00924 Mechanosensitive ion channel AA042_RS17245 PF05552 Conserved TM helix AA042_RS17250 PF03573 outer membrane porin, OprD family AA042_RS17265 PF04102 SlyX AA042_RS17270 PF00313 'Cold-shock' DNA-binding domain AA042_RS17280 PF09723 Zinc ribbon domain AA042_RS17285 PF00152 tRNA synthetases class II (D, K and N) AA042_RS17285 PF01336 OB-fold nucleic acid binding domain AA042_RS17285 PF02938 GAD domain AA042_RS17290 PF01709 Transcriptional regulator AA042_RS17295 PF02075 Crossover junction endodeoxyribonuclease RuvC AA042_RS17300 PF01330 RuvA N terminal domain AA042_RS17300 PF07499 RuvA, C-terminal domain AA042_RS17305 PF17864 RuvB AAA lid domain AA042_RS17305 PF05491 RuvB C-terminal winged helix domain AA042_RS17305 PF05496 Holliday junction DNA helicase RuvB P-loop domain AA042_RS17310 PF03061 Thioesterase superfamily AA042_RS17315 PF01618 MotA/TolQ/ExbB proton channel family AA042_RS17320 PF02472 Biopolymer transport protein ExbD/TolR AA042_RS17330 PF04052 TolB amino-terminal domain AA042_RS17330 PF07676 WD40-like Beta Propeller Repeat AA042_RS17335 PF00691 OmpA family AA042_RS17345 PF04055 Radical SAM superfamily AA042_RS17350 PF06508 Queuosine biosynthesis protein QueC AA042_RS17370 PF02445 Quinolinate synthetase A protein AA042_RS17375 PF01435 Peptidase family M48 AA042_RS17375 PF13181 Tetratricopeptide repeat AA042_RS17380 PF01206 Sulfurtransferase TusA AA042_RS17385 PF01594 AI-2E family transporter AA042_RS17390 PF11791 Aconitate B N-terminal domain AA042_RS17390 PF00330 Aconitase family (aconitate hydratase) AA042_RS17390 PF06434 Aconitate hydratase 2 N-terminus AA042_RS17405 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AA042_RS17410 PF01047 MarR family AA042_RS17415 PF02321 Outer membrane efflux protein AA042_RS17420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AA042_RS17420 PF00529 HlyD membrane-fusion protein of T1SS AA042_RS17425 PF07690 Major Facilitator Superfamily AA042_RS17430 PF12850 Calcineurin-like phosphoesterase superfamily domain AA042_RS17435 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AA042_RS17440 PF00749 tRNA synthetases class I (E and Q), catalytic domain AA042_RS17440 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AA042_RS17445 PF09190 DALR domain AA042_RS17445 PF01406 tRNA synthetases class I (C) catalytic domain AA042_RS17470 PF05698 Bacterial trigger factor protein (TF) C-terminus AA042_RS17470 PF05697 Bacterial trigger factor protein (TF) AA042_RS17470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AA042_RS17475 PF00574 Clp protease AA042_RS17480 PF07724 AAA domain (Cdc48 subfamily) AA042_RS17480 PF06689 ClpX C4-type zinc finger AA042_RS17480 PF10431 C-terminal, D2-small domain, of ClpB protein AA042_RS17485 PF02190 ATP-dependent protease La (LON) substrate-binding domain AA042_RS17485 PF00004 ATPase family associated with various cellular activities (AAA) AA042_RS17485 PF05362 Lon protease (S16) C-terminal proteolytic domain AA042_RS17490 PF00216 Bacterial DNA-binding protein AA042_RS17495 PF09312 SurA N-terminal domain AA042_RS17495 PF00639 PPIC-type PPIASE domain AA042_RS17505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AA042_RS17505 PF00005 ABC transporter AA042_RS17510 PF12911 N-terminal TM domain of oligopeptide transport permease C AA042_RS17510 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS17515 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS17520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AA042_RS17525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AA042_RS17530 PF01464 Transglycosylase SLT domain AA042_RS17530 PF01476 LysM domain AA042_RS17535 PF16123 Hydroxyacylglutathione hydrolase C-terminus AA042_RS17535 PF00753 Metallo-beta-lactamase superfamily AA042_RS17545 PF00075 RNase H AA042_RS17550 PF00929 Exonuclease AA042_RS17565 PF03358 NADPH-dependent FMN reductase AA042_RS17570 PF13419 Haloacid dehalogenase-like hydrolase AA042_RS17580 PF03466 LysR substrate binding domain AA042_RS17580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS17585 PF01709 Transcriptional regulator AA042_RS17595 PF00246 Zinc carboxypeptidase AA042_RS17595 PF18027 Cytosolic carboxypeptidase N-terminal domain AA042_RS17600 PF01037 Lrp/AsnC ligand binding domain AA042_RS17615 PF01381 Helix-turn-helix AA042_RS17615 PF00717 Peptidase S24-like AA042_RS17620 PF00364 Biotin-requiring enzyme AA042_RS17620 PF00289 Biotin carboxylase, N-terminal domain AA042_RS17620 PF02785 Biotin carboxylase C-terminal domain AA042_RS17620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AA042_RS17625 PF00378 Enoyl-CoA hydratase/isomerase AA042_RS17630 PF01039 Carboxyl transferase domain AA042_RS17635 PF02770 Acyl-CoA dehydrogenase, middle domain AA042_RS17635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS17635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS17640 PF13193 AMP-binding enzyme C-terminal domain AA042_RS17640 PF00501 AMP-binding enzyme AA042_RS17650 PF00682 HMGL-like AA042_RS17655 PF13411 MerR HTH family regulatory protein AA042_RS17660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS17660 PF03466 LysR substrate binding domain AA042_RS17665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS17665 PF02770 Acyl-CoA dehydrogenase, middle domain AA042_RS17665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS17670 PF12849 PBP superfamily domain AA042_RS17675 PF03372 Endonuclease/Exonuclease/phosphatase family AA042_RS17685 PF01103 Surface antigen AA042_RS17685 PF17243 POTRA domain TamA domain 1 AA042_RS17685 PF07244 Surface antigen variable number repeat AA042_RS17700 PF03466 LysR substrate binding domain AA042_RS17700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS17720 PF01804 Penicillin amidase AA042_RS17745 PF03969 AFG1-like ATPase AA042_RS17750 PF00248 Aldo/keto reductase family AA042_RS17775 PF02687 FtsX-like permease family AA042_RS17775 PF00005 ABC transporter AA042_RS17775 PF12704 MacB-like periplasmic core domain AA042_RS17780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AA042_RS17790 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AA042_RS17800 PF02308 MgtC family AA042_RS17810 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA042_RS17810 PF00072 Response regulator receiver domain AA042_RS17810 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS17810 PF00989 PAS fold AA042_RS17810 PF01627 Hpt domain AA042_RS17810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS17820 PF00583 Acetyltransferase (GNAT) family AA042_RS17830 PF00884 Sulfatase AA042_RS17840 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AA042_RS17840 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AA042_RS17845 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AA042_RS17845 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AA042_RS17855 PF00378 Enoyl-CoA hydratase/isomerase AA042_RS17860 PF00293 NUDIX domain AA042_RS17860 PF09297 NADH pyrophosphatase zinc ribbon domain AA042_RS17860 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AA042_RS17865 PF01925 Sulfite exporter TauE/SafE AA042_RS17870 PF00266 Aminotransferase class-V AA042_RS17875 PF00557 Metallopeptidase family M24 AA042_RS17875 PF01321 Creatinase/Prolidase N-terminal domain AA042_RS17885 PF00892 EamA-like transporter family AA042_RS17920 PF01242 6-pyruvoyl tetrahydropterin synthase AA042_RS17930 PF00072 Response regulator receiver domain AA042_RS17930 PF00486 Transcriptional regulatory protein, C terminal AA042_RS17935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS17935 PF08918 PhoQ Sensor AA042_RS17940 PF00672 HAMP domain AA042_RS17940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS17945 PF03553 Na+/H+ antiporter family AA042_RS17945 PF13726 Na+-H+ antiporter family AA042_RS17950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS17950 PF00672 HAMP domain AA042_RS17950 PF17200 Single Cache domain 2 AA042_RS17955 PF02678 Pirin AA042_RS17955 PF05726 Pirin C-terminal cupin domain AA042_RS17975 PF00109 Beta-ketoacyl synthase, N-terminal domain AA042_RS17975 PF02801 Beta-ketoacyl synthase, C-terminal domain AA042_RS17980 PF07977 FabA-like domain AA042_RS17985 PF00672 HAMP domain AA042_RS17985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS17985 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS17985 PF01627 Hpt domain AA042_RS17985 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA042_RS17985 PF00072 Response regulator receiver domain AA042_RS17990 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AA042_RS17990 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AA042_RS18000 PF00300 Histidine phosphatase superfamily (branch 1) AA042_RS18005 PF03061 Thioesterase superfamily AA042_RS18015 PF12697 Alpha/beta hydrolase family AA042_RS18025 PF01594 AI-2E family transporter AA042_RS18040 PF01844 HNH endonuclease AA042_RS18055 PF00326 Prolyl oligopeptidase family AA042_RS18055 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AA042_RS18065 PF13230 Glutamine amidotransferases class-II AA042_RS18075 PF03746 LamB/YcsF family AA042_RS18080 PF02682 Carboxyltransferase domain, subdomain C and D AA042_RS18085 PF02626 Carboxyltransferase domain, subdomain A and B AA042_RS18095 PF07724 AAA domain (Cdc48 subfamily) AA042_RS18095 PF00004 ATPase family associated with various cellular activities (AAA) AA042_RS18095 PF10431 C-terminal, D2-small domain, of ClpB protein AA042_RS18095 PF02861 Clp amino terminal domain, pathogenicity island component AA042_RS18095 PF17871 AAA lid domain AA042_RS18100 PF00291 Pyridoxal-phosphate dependent enzyme AA042_RS18120 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AA042_RS18125 PF04408 Helicase associated domain (HA2) AA042_RS18125 PF11898 Domain of unknown function (DUF3418) AA042_RS18125 PF00270 DEAD/DEAH box helicase AA042_RS18125 PF00271 Helicase conserved C-terminal domain AA042_RS18125 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AA042_RS18130 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AA042_RS18130 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AA042_RS18135 PF04542 Sigma-70 region 2 AA042_RS18135 PF08281 Sigma-70, region 4 AA042_RS18155 PF00230 Major intrinsic protein AA042_RS18160 PF00664 ABC transporter transmembrane region AA042_RS18160 PF00005 ABC transporter AA042_RS18165 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AA042_RS18175 PF02525 Flavodoxin-like fold AA042_RS18190 PF00924 Mechanosensitive ion channel AA042_RS18195 PF00270 DEAD/DEAH box helicase AA042_RS18195 PF00271 Helicase conserved C-terminal domain AA042_RS18215 PF13509 S1 domain AA042_RS18215 PF17783 CvfB-like winged helix domain AA042_RS18225 PF00892 EamA-like transporter family AA042_RS18235 PF04304 Protein of unknown function (DUF454) AA042_RS18245 PF09382 RQC domain AA042_RS18245 PF16124 RecQ zinc-binding AA042_RS18245 PF00271 Helicase conserved C-terminal domain AA042_RS18245 PF00270 DEAD/DEAH box helicase AA042_RS18245 PF00570 HRDC domain AA042_RS18250 PF01047 MarR family AA042_RS18255 PF01734 Patatin-like phospholipase AA042_RS18275 PF02386 Cation transport protein AA042_RS18280 PF00881 Nitroreductase family AA042_RS18285 PF08521 Two-component sensor kinase N-terminal AA042_RS18285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS18285 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS18295 PF00486 Transcriptional regulatory protein, C terminal AA042_RS18295 PF00072 Response regulator receiver domain AA042_RS18305 PF03795 YCII-related domain AA042_RS18310 PF04279 Intracellular septation protein A AA042_RS18320 PF01300 Telomere recombination AA042_RS18325 PF02616 Segregation and condensation protein ScpA AA042_RS18330 PF04079 Segregation and condensation complex subunit ScpB AA042_RS18340 PF01479 S4 domain AA042_RS18340 PF00849 RNA pseudouridylate synthase AA042_RS18350 PF00472 RF-1 domain AA042_RS18355 PF07690 Major Facilitator Superfamily AA042_RS18360 PF00155 Aminotransferase class I and II AA042_RS18365 PF01329 Pterin 4 alpha carbinolamine dehydratase AA042_RS18370 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AA042_RS18375 PF00158 Sigma-54 interaction domain AA042_RS18375 PF18024 Helix-turn-helix domain AA042_RS18380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AA042_RS18380 PF00460 Flagella basal body rod protein AA042_RS18385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AA042_RS18385 PF00460 Flagella basal body rod protein AA042_RS18390 PF02107 Flagellar L-ring protein AA042_RS18395 PF02119 Flagellar P-ring protein AA042_RS18400 PF10135 Rod binding protein AA042_RS18400 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AA042_RS18415 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AA042_RS18415 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AA042_RS18420 PF00700 Bacterial flagellin C-terminal helical region AA042_RS18420 PF00669 Bacterial flagellin N-terminal helical region AA042_RS18425 PF03646 FlaG protein AA042_RS18430 PF07196 Flagellin hook IN motif AA042_RS18430 PF07195 Flagellar hook-associated protein 2 C-terminus AA042_RS18430 PF02465 Flagellar hook-associated protein 2 N-terminus AA042_RS18435 PF02561 Flagellar protein FliS AA042_RS18445 PF06490 Flagellar regulatory protein FleQ AA042_RS18445 PF02954 Bacterial regulatory protein, Fis family AA042_RS18445 PF00158 Sigma-54 interaction domain AA042_RS18455 PF00072 Response regulator receiver domain AA042_RS18455 PF00158 Sigma-54 interaction domain AA042_RS18455 PF02954 Bacterial regulatory protein, Fis family AA042_RS18460 PF02049 Flagellar hook-basal body complex protein FliE AA042_RS18465 PF01514 Secretory protein of YscJ/FliF family AA042_RS18465 PF08345 Flagellar M-ring protein C-terminal AA042_RS18470 PF14842 FliG N-terminal domain AA042_RS18470 PF01706 FliG C-terminal domain AA042_RS18470 PF14841 FliG middle domain AA042_RS18480 PF18269 T3SS EscN ATPase C-terminal domain AA042_RS18480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AA042_RS18490 PF13466 STAS domain AA042_RS18495 PF00072 Response regulator receiver domain AA042_RS18495 PF00486 Transcriptional regulatory protein, C terminal AA042_RS18515 PF02154 Flagellar motor switch protein FliM AA042_RS18515 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AA042_RS18520 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AA042_RS18525 PF04347 Flagellar biosynthesis protein, FliO AA042_RS18530 PF00813 FliP family AA042_RS18535 PF01313 Bacterial export proteins, family 3 AA042_RS18540 PF01311 Bacterial export proteins, family 1 AA042_RS18545 PF01312 FlhB HrpN YscU SpaS Family AA042_RS18565 PF00771 FHIPEP family AA042_RS18570 PF00448 SRP54-type protein, GTPase domain AA042_RS18575 PF10609 NUBPL iron-transfer P-loop NTPase AA042_RS18580 PF04545 Sigma-70, region 4 AA042_RS18580 PF04539 Sigma-70 region 3 AA042_RS18580 PF04542 Sigma-70 region 2 AA042_RS18585 PF00072 Response regulator receiver domain AA042_RS18590 PF04344 Chemotaxis phosphatase, CheZ AA042_RS18595 PF00072 Response regulator receiver domain AA042_RS18595 PF01627 Hpt domain AA042_RS18595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS18595 PF02895 Signal transducing histidine kinase, homodimeric domain AA042_RS18595 PF01584 CheW-like domain AA042_RS18605 PF01618 MotA/TolQ/ExbB proton channel family AA042_RS18610 PF00691 OmpA family AA042_RS18610 PF13677 Membrane MotB of proton-channel complex MotA/MotB AA042_RS18615 PF13614 AAA domain AA042_RS18625 PF01584 CheW-like domain AA042_RS18635 PF00293 NUDIX domain AA042_RS18640 PF01312 FlhB HrpN YscU SpaS Family AA042_RS18650 PF00005 ABC transporter AA042_RS18655 PF03379 CcmB protein AA042_RS18660 PF01578 Cytochrome C assembly protein AA042_RS18665 PF04995 Heme exporter protein D (CcmD) AA042_RS18670 PF03100 CcmE AA042_RS18675 PF01578 Cytochrome C assembly protein AA042_RS18675 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AA042_RS18680 PF08534 Redoxin AA042_RS18685 PF03918 Cytochrome C biogenesis protein AA042_RS18705 PF02567 Phenazine biosynthesis-like protein AA042_RS18720 PF00027 Cyclic nucleotide-binding domain AA042_RS18720 PF00520 Ion transport protein AA042_RS18725 PF03253 Urea transporter AA042_RS18730 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AA042_RS18730 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AA042_RS18735 PF01261 Xylose isomerase-like TIM barrel AA042_RS18750 PF08362 YcdC-like protein, C-terminal region AA042_RS18750 PF00440 Bacterial regulatory proteins, tetR family AA042_RS18755 PF05661 Protein of unknown function (DUF808) AA042_RS18760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS18770 PF00440 Bacterial regulatory proteins, tetR family AA042_RS18785 PF00860 Permease family AA042_RS18795 PF04115 Ureidoglycolate lyase AA042_RS18800 PF03561 Allantoicase repeat AA042_RS18805 PF01014 Uricase AA042_RS18805 PF09349 OHCU decarboxylase AA042_RS18810 PF01522 Polysaccharide deacetylase AA042_RS18815 PF00576 HIUase/Transthyretin family AA042_RS18830 PF00860 Permease family AA042_RS18840 PF00155 Aminotransferase class I and II AA042_RS18855 PF01227 GTP cyclohydrolase I AA042_RS18865 PF01320 Colicin immunity protein / pyocin immunity protein AA042_RS18875 PF01320 Colicin immunity protein / pyocin immunity protein AA042_RS18900 PF01713 Smr domain AA042_RS18915 PF05175 Methyltransferase small domain AA042_RS18925 PF12146 Serine aminopeptidase, S33 AA042_RS18925 PF13026 Protein of unknown function (DUF3887) AA042_RS18930 PF01264 Chorismate synthase AA042_RS18940 PF00596 Class II Aldolase and Adducin N-terminal domain AA042_RS18945 PF03079 ARD/ARD' family AA042_RS18960 PF00023 Ankyrin repeat AA042_RS18960 PF12796 Ankyrin repeats (3 copies) AA042_RS18975 PF17284 Spermidine synthase tetramerisation domain AA042_RS18980 PF00884 Sulfatase AA042_RS18990 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AA042_RS18995 PF02599 Global regulator protein family AA042_RS19000 PF06794 Uncharacterised protein family (UPF0270) AA042_RS19005 PF13409 Glutathione S-transferase, N-terminal domain AA042_RS19010 PF02885 Glycosyl transferase family, helical bundle domain AA042_RS19010 PF00591 Glycosyl transferase family, a/b domain AA042_RS19015 PF04358 DsrC like protein AA042_RS19025 PF02635 DsrE/DsrF-like family AA042_RS19030 PF02635 DsrE/DsrF-like family AA042_RS19035 PF01027 Inhibitor of apoptosis-promoting Bax1 AA042_RS19070 PF06958 S-type Pyocin AA042_RS19095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS19095 PF13426 PAS domain AA042_RS19095 PF08447 PAS fold AA042_RS19130 PF01425 Amidase AA042_RS19150 PF03104 DNA polymerase family B, exonuclease domain AA042_RS19150 PF00136 DNA polymerase family B AA042_RS19160 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AA042_RS19165 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AA042_RS19170 PF07885 Ion channel AA042_RS19170 PF02254 TrkA-N domain AA042_RS19175 PF03824 High-affinity nickel-transport protein AA042_RS19180 PF03253 Urea transporter AA042_RS19185 PF01774 UreD urease accessory protein AA042_RS19190 PF02492 CobW/HypB/UreG, nucleotide-binding domain AA042_RS19195 PF01730 UreF AA042_RS19200 PF02814 UreE urease accessory protein, N-terminal domain AA042_RS19200 PF05194 UreE urease accessory protein, C-terminal domain AA042_RS19205 PF00449 Urease alpha-subunit, N-terminal domain AA042_RS19205 PF01979 Amidohydrolase family AA042_RS19210 PF00699 Urease beta subunit AA042_RS19215 PF00547 Urease, gamma subunit AA042_RS19220 PF04632 Fusaric acid resistance protein family AA042_RS19225 PF01565 FAD binding domain AA042_RS19225 PF02913 FAD linked oxidases, C-terminal domain AA042_RS19230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS19230 PF03466 LysR substrate binding domain AA042_RS19235 PF07690 Major Facilitator Superfamily AA042_RS19240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS19240 PF03466 LysR substrate binding domain AA042_RS19250 PF13533 Biotin-lipoyl like AA042_RS19255 PF02321 Outer membrane efflux protein AA042_RS19260 PF00083 Sugar (and other) transporter AA042_RS19260 PF08946 Osmosensory transporter coiled coil AA042_RS19265 PF04542 Sigma-70 region 2 AA042_RS19265 PF08281 Sigma-70, region 4 AA042_RS19275 PF00593 TonB dependent receptor AA042_RS19275 PF07660 Secretin and TonB N terminus short domain AA042_RS19275 PF07715 TonB-dependent Receptor Plug Domain AA042_RS19280 PF07690 Major Facilitator Superfamily AA042_RS19285 PF17757 UvrB interaction domain AA042_RS19285 PF12344 Ultra-violet resistance protein B AA042_RS19285 PF02151 UvrB/uvrC motif AA042_RS19285 PF04851 Type III restriction enzyme, res subunit AA042_RS19285 PF00271 Helicase conserved C-terminal domain AA042_RS19290 PF00155 Aminotransferase class I and II AA042_RS19310 PF01614 Bacterial transcriptional regulator AA042_RS19310 PF09339 IclR helix-turn-helix domain AA042_RS19315 PF14525 AraC-binding-like domain AA042_RS19315 PF12833 Helix-turn-helix domain AA042_RS19320 PF00355 Rieske [2Fe-2S] domain AA042_RS19320 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AA042_RS19325 PF00866 Ring hydroxylating beta subunit AA042_RS19330 PF00111 2Fe-2S iron-sulfur cluster binding domain AA042_RS19330 PF00175 Oxidoreductase NAD-binding domain AA042_RS19330 PF00970 Oxidoreductase FAD-binding domain AA042_RS19335 PF00106 short chain dehydrogenase AA042_RS19340 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AA042_RS19340 PF13378 Enolase C-terminal domain-like AA042_RS19345 PF02426 Muconolactone delta-isomerase AA042_RS19350 PF04444 Catechol dioxygenase N terminus AA042_RS19350 PF00775 Dioxygenase AA042_RS19355 PF01144 Coenzyme A transferase AA042_RS19365 PF00108 Thiolase, N-terminal domain AA042_RS19365 PF02803 Thiolase, C-terminal domain AA042_RS19370 PF12146 Serine aminopeptidase, S33 AA042_RS19380 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS19380 PF00072 Response regulator receiver domain AA042_RS19380 PF13188 PAS domain AA042_RS19380 PF08448 PAS fold AA042_RS19380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS19400 PF06039 Malate:quinone oxidoreductase (Mqo) AA042_RS19430 PF00440 Bacterial regulatory proteins, tetR family AA042_RS19435 PF13360 PQQ-like domain AA042_RS19435 PF01011 PQQ enzyme repeat AA042_RS19440 PF00583 Acetyltransferase (GNAT) family AA042_RS19450 PF00155 Aminotransferase class I and II AA042_RS19450 PF00392 Bacterial regulatory proteins, gntR family AA042_RS19460 PF07759 Protein of unknown function (DUF1615) AA042_RS19465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AA042_RS19470 PF07715 TonB-dependent Receptor Plug Domain AA042_RS19470 PF00593 TonB dependent receptor AA042_RS19505 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS19515 PF01464 Transglycosylase SLT domain AA042_RS19515 PF00497 Bacterial extracellular solute-binding proteins, family 3 AA042_RS19520 PF03306 Alpha-acetolactate decarboxylase AA042_RS19525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS19525 PF00672 HAMP domain AA042_RS19525 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS19530 PF00486 Transcriptional regulatory protein, C terminal AA042_RS19530 PF00072 Response regulator receiver domain AA042_RS19535 PF07690 Major Facilitator Superfamily AA042_RS19540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS19540 PF03466 LysR substrate binding domain AA042_RS19545 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS19545 PF03707 Bacterial signalling protein N terminal repeat AA042_RS19545 PF00563 EAL domain AA042_RS19565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS19565 PF03466 LysR substrate binding domain AA042_RS19575 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA042_RS19575 PF04324 BFD-like [2Fe-2S] binding domain AA042_RS19580 PF01266 FAD dependent oxidoreductase AA042_RS19590 PF00268 Ribonucleotide reductase, small chain AA042_RS19595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS19595 PF03466 LysR substrate binding domain AA042_RS19610 PF00723 Glycosyl hydrolases family 15 AA042_RS19615 PF00593 TonB dependent receptor AA042_RS19615 PF07660 Secretin and TonB N terminus short domain AA042_RS19615 PF07715 TonB-dependent Receptor Plug Domain AA042_RS19620 PF00664 ABC transporter transmembrane region AA042_RS19620 PF00005 ABC transporter AA042_RS19635 PF03466 LysR substrate binding domain AA042_RS19635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS19640 PF05726 Pirin C-terminal cupin domain AA042_RS19640 PF02678 Pirin AA042_RS19645 PF00857 Isochorismatase family AA042_RS19650 PF00108 Thiolase, N-terminal domain AA042_RS19650 PF02803 Thiolase, C-terminal domain AA042_RS19665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS19670 PF00330 Aconitase family (aconitate hydratase) AA042_RS19675 PF00694 Aconitase C-terminal domain AA042_RS19680 PF08241 Methyltransferase domain AA042_RS19685 PF00180 Isocitrate/isopropylmalate dehydrogenase AA042_RS19690 PF02774 Semialdehyde dehydrogenase, dimerisation domain AA042_RS19690 PF01118 Semialdehyde dehydrogenase, NAD binding domain AA042_RS19695 PF02774 Semialdehyde dehydrogenase, dimerisation domain AA042_RS19695 PF01118 Semialdehyde dehydrogenase, NAD binding domain AA042_RS19705 PF01416 tRNA pseudouridine synthase AA042_RS19710 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AA042_RS19715 PF17848 Acetyl-coA carboxylase zinc finger domain AA042_RS19715 PF01039 Carboxyl transferase domain AA042_RS19720 PF02875 Mur ligase family, glutamate ligase domain AA042_RS19720 PF08245 Mur ligase middle domain AA042_RS19730 PF02674 Colicin V production protein AA042_RS19735 PF00156 Phosphoribosyl transferase domain AA042_RS19765 PF03537 Glycoside-hydrolase family GH114 AA042_RS19790 PF13439 Glycosyltransferase Family 4 AA042_RS19805 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AA042_RS19805 PF12833 Helix-turn-helix domain AA042_RS19810 PF00795 Carbon-nitrogen hydrolase AA042_RS19815 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AA042_RS19815 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA042_RS19825 PF01292 Prokaryotic cytochrome b561 AA042_RS19835 PF01513 ATP-NAD kinase AA042_RS19840 PF00149 Calcineurin-like phosphoesterase AA042_RS19845 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AA042_RS19845 PF01694 Rhomboid family AA042_RS19850 PF07023 Protein of unknown function (DUF1315) AA042_RS19860 PF11940 Domain of unknown function (DUF3458) Ig-like fold AA042_RS19860 PF01433 Peptidase family M1 domain AA042_RS19860 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AA042_RS19865 PF00392 Bacterial regulatory proteins, gntR family AA042_RS19870 PF00920 Dehydratase family AA042_RS19875 PF07690 Major Facilitator Superfamily AA042_RS19885 PF00171 Aldehyde dehydrogenase family AA042_RS19915 PF12320 Type 5 capsule protein repressor C-terminal domain AA042_RS19915 PF00149 Calcineurin-like phosphoesterase AA042_RS19940 PF01882 Protein of unknown function DUF58 AA042_RS19945 PF07726 ATPase family associated with various cellular activities (AAA) AA042_RS19945 PF17863 AAA lid domain AA042_RS19950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS19950 PF03466 LysR substrate binding domain AA042_RS19980 PF04333 MlaA lipoprotein AA042_RS19985 PF02954 Bacterial regulatory protein, Fis family AA042_RS19985 PF00158 Sigma-54 interaction domain AA042_RS19985 PF00072 Response regulator receiver domain AA042_RS19995 PF01207 Dihydrouridine synthase (Dus) AA042_RS20030 PF03060 Nitronate monooxygenase AA042_RS20045 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AA042_RS20045 PF01118 Semialdehyde dehydrogenase, NAD binding domain AA042_RS20050 PF01557 Fumarylacetoacetate (FAA) hydrolase family AA042_RS20065 PF00171 Aldehyde dehydrogenase family AA042_RS20070 PF01425 Amidase AA042_RS20075 PF02492 CobW/HypB/UreG, nucleotide-binding domain AA042_RS20075 PF07683 Cobalamin synthesis protein cobW C-terminal domain AA042_RS20085 PF13519 von Willebrand factor type A domain AA042_RS20085 PF17863 AAA lid domain AA042_RS20085 PF07728 AAA domain (dynein-related subfamily) AA042_RS20100 PF02954 Bacterial regulatory protein, Fis family AA042_RS20100 PF00158 Sigma-54 interaction domain AA042_RS20100 PF00072 Response regulator receiver domain AA042_RS20150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AA042_RS20150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AA042_RS20150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AA042_RS20155 PF00893 Small Multidrug Resistance protein AA042_RS20160 PF00892 EamA-like transporter family AA042_RS20165 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AA042_RS20170 PF01522 Polysaccharide deacetylase AA042_RS20180 PF00535 Glycosyl transferase family 2 AA042_RS20185 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA042_RS20185 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AA042_RS20190 PF00561 alpha/beta hydrolase fold AA042_RS20195 PF07690 Major Facilitator Superfamily AA042_RS20215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AA042_RS20220 PF13193 AMP-binding enzyme C-terminal domain AA042_RS20220 PF00501 AMP-binding enzyme AA042_RS20245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AA042_RS20250 PF01144 Coenzyme A transferase AA042_RS20260 PF00378 Enoyl-CoA hydratase/isomerase AA042_RS20265 PF03060 Nitronate monooxygenase AA042_RS20295 PF08496 Peptidase family S49 N-terminal AA042_RS20295 PF01343 Peptidase family S49 AA042_RS20310 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AA042_RS20310 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AA042_RS20325 PF12468 Type III secretion system leucine rich repeat protein AA042_RS20325 PF14496 C-terminal novel E3 ligase, LRR-interacting AA042_RS20340 PF01521 Iron-sulphur cluster biosynthesis AA042_RS20340 PF01106 NifU-like domain AA042_RS20345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AA042_RS20350 PF01890 Cobalamin synthesis G C-terminus AA042_RS20365 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS20365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS20365 PF13188 PAS domain AA042_RS20365 PF00072 Response regulator receiver domain AA042_RS20365 PF08448 PAS fold AA042_RS20370 PF01627 Hpt domain AA042_RS20370 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS20370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS20370 PF00072 Response regulator receiver domain AA042_RS20375 PF03705 CheR methyltransferase, all-alpha domain AA042_RS20375 PF01739 CheR methyltransferase, SAM binding domain AA042_RS20380 PF01339 CheB methylesterase AA042_RS20385 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AA042_RS20385 PF00072 Response regulator receiver domain AA042_RS20385 PF01627 Hpt domain AA042_RS20385 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS20385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS20385 PF00672 HAMP domain AA042_RS20390 PF00486 Transcriptional regulatory protein, C terminal AA042_RS20390 PF00072 Response regulator receiver domain AA042_RS20410 PF02595 Glycerate kinase family AA042_RS20415 PF13091 PLD-like domain AA042_RS20420 PF07715 TonB-dependent Receptor Plug Domain AA042_RS20420 PF00593 TonB dependent receptor AA042_RS20435 PF01266 FAD dependent oxidoreductase AA042_RS20445 PF13416 Bacterial extracellular solute-binding protein AA042_RS20450 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AA042_RS20450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AA042_RS20460 PF00294 pfkB family carbohydrate kinase AA042_RS20470 PF00356 Bacterial regulatory proteins, lacI family AA042_RS20475 PF00067 Cytochrome P450 AA042_RS20480 PF08548 Peptidase M10 serralysin C terminal AA042_RS20480 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AA042_RS20485 PF02974 Protease inhibitor Inh AA042_RS20495 PF00529 HlyD membrane-fusion protein of T1SS AA042_RS20500 PF02321 Outer membrane efflux protein AA042_RS20505 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AA042_RS20510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS20510 PF17200 Single Cache domain 2 AA042_RS20510 PF00672 HAMP domain AA042_RS20515 PF02673 Bacitracin resistance protein BacA AA042_RS20530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS20530 PF03466 LysR substrate binding domain AA042_RS20535 PF02525 Flavodoxin-like fold AA042_RS20545 PF00005 ABC transporter AA042_RS20545 PF12848 ABC transporter AA042_RS20570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS20570 PF00672 HAMP domain AA042_RS20570 PF12729 Four helix bundle sensory module for signal transduction AA042_RS20595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS20595 PF03466 LysR substrate binding domain AA042_RS20600 PF00107 Zinc-binding dehydrogenase AA042_RS20600 PF00109 Beta-ketoacyl synthase, N-terminal domain AA042_RS20600 PF02801 Beta-ketoacyl synthase, C-terminal domain AA042_RS20600 PF08659 KR domain AA042_RS20600 PF00550 Phosphopantetheine attachment site AA042_RS20600 PF14765 Polyketide synthase dehydratase AA042_RS20600 PF00698 Acyl transferase domain AA042_RS20600 PF16197 Ketoacyl-synthetase C-terminal extension AA042_RS20600 PF08240 Alcohol dehydrogenase GroES-like domain AA042_RS20610 PF08774 VRR-NUC domain AA042_RS20610 PF18081 Fanconi anemia-associated nuclease SAP domain AA042_RS20620 PF01042 Endoribonuclease L-PSP AA042_RS20635 PF00072 Response regulator receiver domain AA042_RS20635 PF13426 PAS domain AA042_RS20635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS20640 PF03573 outer membrane porin, OprD family AA042_RS20645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AA042_RS20650 PF01757 Acyltransferase family AA042_RS20660 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS20660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS20665 PF00890 FAD binding domain AA042_RS20670 PF00890 FAD binding domain AA042_RS20675 PF00111 2Fe-2S iron-sulfur cluster binding domain AA042_RS20675 PF00970 Oxidoreductase FAD-binding domain AA042_RS20675 PF00175 Oxidoreductase NAD-binding domain AA042_RS20680 PF00501 AMP-binding enzyme AA042_RS20680 PF13193 AMP-binding enzyme C-terminal domain AA042_RS20700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS20700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS20715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS20715 PF02770 Acyl-CoA dehydrogenase, middle domain AA042_RS20715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS20720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS20720 PF02770 Acyl-CoA dehydrogenase, middle domain AA042_RS20720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS20725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS20725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS20730 PF00501 AMP-binding enzyme AA042_RS20730 PF13193 AMP-binding enzyme C-terminal domain AA042_RS20735 PF07044 Protein of unknown function (DUF1329) AA042_RS20740 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AA042_RS20750 PF03170 Bacterial cellulose synthase subunit AA042_RS20780 PF10995 Cellulose biosynthesis GIL AA042_RS20785 PF01425 Amidase AA042_RS20800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AA042_RS20800 PF12806 Acetyl-CoA dehydrogenase C-terminal like AA042_RS20800 PF02770 Acyl-CoA dehydrogenase, middle domain AA042_RS20800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AA042_RS20805 PF13193 AMP-binding enzyme C-terminal domain AA042_RS20805 PF00501 AMP-binding enzyme AA042_RS20810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS20810 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS20810 PF00989 PAS fold AA042_RS20815 PF00072 Response regulator receiver domain AA042_RS20815 PF00196 Bacterial regulatory proteins, luxR family AA042_RS20820 PF00155 Aminotransferase class I and II AA042_RS20825 PF01810 LysE type translocator AA042_RS20830 PF02899 Phage integrase, N-terminal SAM-like domain AA042_RS20830 PF00589 Phage integrase family AA042_RS20855 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain AA042_RS20855 PF18413 Neuraminidase-like domain AA042_RS20860 PF03534 Salmonella virulence plasmid 65kDa B protein AA042_RS20860 PF12256 Insecticide toxin TcdB middle/N-terminal region AA042_RS20860 PF12255 Insecticide toxin TcdB middle/C-terminal region AA042_RS20865 PF14431 YwqJ-like deaminase AA042_RS20865 PF18807 Tripartite Tc toxins repeat AA042_RS20870 PF14431 YwqJ-like deaminase AA042_RS20870 PF18807 Tripartite Tc toxins repeat AA042_RS20890 PF03573 outer membrane porin, OprD family AA042_RS20910 PF07690 Major Facilitator Superfamily AA042_RS20925 PF17954 Quercetinase C-terminal cupin domain AA042_RS20925 PF02678 Pirin AA042_RS20935 PF07690 Major Facilitator Superfamily AA042_RS20940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS20940 PF03466 LysR substrate binding domain AA042_RS20945 PF01810 LysE type translocator AA042_RS20955 PF09335 SNARE associated Golgi protein AA042_RS20990 PF13419 Haloacid dehalogenase-like hydrolase AA042_RS20995 PF01872 RibD C-terminal domain AA042_RS21000 PF08240 Alcohol dehydrogenase GroES-like domain AA042_RS21000 PF00107 Zinc-binding dehydrogenase AA042_RS21005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AA042_RS21010 PF00873 AcrB/AcrD/AcrF family AA042_RS21015 PF02321 Outer membrane efflux protein AA042_RS21020 PF13556 PucR C-terminal helix-turn-helix domain AA042_RS21020 PF17853 GGDEF-like domain AA042_RS21020 PF05651 Putative sugar diacid recognition AA042_RS21025 PF07690 Major Facilitator Superfamily AA042_RS21030 PF00892 EamA-like transporter family AA042_RS21045 PF00072 Response regulator receiver domain AA042_RS21045 PF00486 Transcriptional regulatory protein, C terminal AA042_RS21050 PF00529 HlyD membrane-fusion protein of T1SS AA042_RS21050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AA042_RS21055 PF00873 AcrB/AcrD/AcrF family AA042_RS21065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AA042_RS21070 PF12792 CSS motif domain associated with EAL AA042_RS21070 PF00563 EAL domain AA042_RS21080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AA042_RS21085 PF13192 Thioredoxin domain AA042_RS21085 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA042_RS21090 PF10417 C-terminal domain of 1-Cys peroxiredoxin AA042_RS21090 PF00578 AhpC/TSA family AA042_RS21115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AA042_RS21115 PF07992 Pyridine nucleotide-disulphide oxidoreductase AA042_RS21120 PF00483 Nucleotidyl transferase AA042_RS21140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AA042_RS21145 PF00034 Cytochrome c AA042_RS21160 PF13532 2OG-Fe(II) oxygenase superfamily AA042_RS21170 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS21175 PF00005 ABC transporter AA042_RS21175 PF03459 TOBE domain AA042_RS21185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS21185 PF03466 LysR substrate binding domain AA042_RS21190 PF01975 Survival protein SurE AA042_RS21195 PF04216 Protein involved in formate dehydrogenase formation AA042_RS21200 PF01292 Prokaryotic cytochrome b561 AA042_RS21205 PF09163 Formate dehydrogenase N, transmembrane AA042_RS21205 PF13247 4Fe-4S dicluster domain AA042_RS21210 PF00384 Molybdopterin oxidoreductase AA042_RS21210 PF01568 Molydopterin dinucleotide binding domain AA042_RS21210 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AA042_RS21215 PF00490 Delta-aminolevulinic acid dehydratase AA042_RS21225 PF14765 Polyketide synthase dehydratase AA042_RS21225 PF16197 Ketoacyl-synthetase C-terminal extension AA042_RS21225 PF08659 KR domain AA042_RS21225 PF02801 Beta-ketoacyl synthase, C-terminal domain AA042_RS21225 PF00109 Beta-ketoacyl synthase, N-terminal domain AA042_RS21225 PF00698 Acyl transferase domain AA042_RS21225 PF08240 Alcohol dehydrogenase GroES-like domain AA042_RS21225 PF00550 Phosphopantetheine attachment site AA042_RS21225 PF00107 Zinc-binding dehydrogenase AA042_RS21230 PF04073 Aminoacyl-tRNA editing domain AA042_RS21240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AA042_RS21240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AA042_RS21240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AA042_RS21240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AA042_RS21245 PF03974 Ecotin AA042_RS21250 PF07995 Glucose / Sorbosone dehydrogenase AA042_RS21270 PF06411 HdeA/HdeB family AA042_RS21275 PF00107 Zinc-binding dehydrogenase AA042_RS21275 PF13823 Alcohol dehydrogenase GroES-associated AA042_RS21275 PF08240 Alcohol dehydrogenase GroES-like domain AA042_RS21285 PF03707 Bacterial signalling protein N terminal repeat AA042_RS21285 PF00990 Diguanylate cyclase, GGDEF domain AA042_RS21285 PF00563 EAL domain AA042_RS21290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AA042_RS21290 PF00034 Cytochrome c AA042_RS21295 PF01965 DJ-1/PfpI family AA042_RS21295 PF12833 Helix-turn-helix domain AA042_RS21300 PF08946 Osmosensory transporter coiled coil AA042_RS21300 PF00083 Sugar (and other) transporter AA042_RS21305 PF00557 Metallopeptidase family M24 AA042_RS21305 PF01321 Creatinase/Prolidase N-terminal domain AA042_RS21310 PF00072 Response regulator receiver domain AA042_RS21310 PF00486 Transcriptional regulatory protein, C terminal AA042_RS21315 PF00672 HAMP domain AA042_RS21315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AA042_RS21315 PF00512 His Kinase A (phospho-acceptor) domain AA042_RS21315 PF16750 Sensor domain of 2-component histidine kinase AA042_RS21335 PF09335 SNARE associated Golgi protein AA042_RS21340 PF10518 TAT (twin-arginine translocation) pathway signal sequence AA042_RS21340 PF00149 Calcineurin-like phosphoesterase AA042_RS21345 PF01402 Ribbon-helix-helix protein, copG family AA042_RS21345 PF08753 NikR C terminal nickel binding domain AA042_RS21350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AA042_RS21355 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS21360 PF00528 Binding-protein-dependent transport system inner membrane component AA042_RS21365 PF00005 ABC transporter AA042_RS21370 PF00005 ABC transporter AA042_RS21375 PF07690 Major Facilitator Superfamily AA042_RS21380 PF07715 TonB-dependent Receptor Plug Domain AA042_RS21380 PF00593 TonB dependent receptor AA042_RS21405 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AA042_RS21415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AA042_RS21415 PF03466 LysR substrate binding domain AA042_RS21445 PF04717 Type VI secretion system, phage-baseplate injector AA042_RS21445 PF16671 Actin cross-linking domain AA042_RS21450 PF05638 Type VI secretion system effector, Hcp AA042_RS21455 PF05643 Putative bacterial lipoprotein (DUF799) AA042_RS21465 PF03783 Curli production assembly/transport component CsgG AA042_RS21470 PF12833 Helix-turn-helix domain AA042_RS21470 PF01965 DJ-1/PfpI family AA042_RS21490 PF00069 Protein kinase domain AA042_RS21490 PF03793 PASTA domain AA042_RS21530 PF02954 Bacterial regulatory protein, Fis family AA042_RS21530 PF00158 Sigma-54 interaction domain AA042_RS21530 PF00072 Response regulator receiver domain AA042_RS21535 PF00004 ATPase family associated with various cellular activities (AAA) AA042_RS21535 PF07724 AAA domain (Cdc48 subfamily) AA042_RS21535 PF17871 AAA lid domain AA042_RS21535 PF10431 C-terminal, D2-small domain, of ClpB protein AA042_RS21570 PF05638 Type VI secretion system effector, Hcp AA042_RS21575 PF04717 Type VI secretion system, phage-baseplate injector AA042_RS21580 PF05593 RHS Repeat AA042_RS21580 PF03527 RHS protein AA042_RS21635 PF09278 MerR, DNA binding AA042_RS21635 PF00376 MerR family regulatory protein AA042_RS21645 PF13438 Domain of unknown function (DUF4113) AA042_RS21645 PF11799 impB/mucB/samB family C-terminal domain AA042_RS21645 PF00817 impB/mucB/samB family AA042_RS21650 PF00717 Peptidase S24-like AA042_RS21660 PF13443 Cro/C1-type HTH DNA-binding domain AA042_RS21665 PF01053 Cys/Met metabolism PLP-dependent enzyme AA042_RS21670 PF13404 AsnC-type helix-turn-helix domain AA042_RS21670 PF01037 Lrp/AsnC ligand binding domain AA042_RS21685 PF00083 Sugar (and other) transporter AA042_RS21685 PF08946 Osmosensory transporter coiled coil AA042_RS21690 PF04816 tRNA (adenine(22)-N(1))-methyltransferase AA042_RS21755 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system AA042_RS21770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AA042_RS21770 PF00672 HAMP domain AA042_RS21775 PF00665 Integrase core domain AA042_RS21775 PF13936 Helix-turn-helix domain AA042_RS21805 PF00182 Chitinase class I AA042_RS21810 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AA042_RS21975 PF09411 Lipid A 3-O-deacylase (PagL) AA042_RS22010 PF00772 DnaB-like helicase N terminal domain AA042_RS22010 PF03796 DnaB-like helicase C terminal domain AA042_RS22175 PF01320 Colicin immunity protein / pyocin immunity protein AA042_RS22275 PF05593 RHS Repeat AA042_RS22275 PF03527 RHS protein