##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM718289v1
#!genome-build-accession NCBI_Assembly:GCF_007182895.1
#!annotation-date 12/31/2022 01:48:50
#!annotation-source NCBI RefSeq 
##sequence-region NZ_AP019516.1 1 3188207
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2517899
NZ_AP019516.1	RefSeq	region	1	3188207	.	+	.	ID=NZ_AP019516.1:1..3188207;Dbxref=taxon:2517899;Is_circular=true;Name=ANONYMOUS;collection-date=2017-04-30;country=Japan: Nankai Trough 33.27.005 N%2C 137.16.990 E;gbkey=Src;genome=chromosome;isolation-source=deep-sea sediment;mol_type=genomic DNA;strain=KH172YL61
NZ_AP019516.1	RefSeq	gene	1118	2293	.	+	.	ID=gene-PKHYL_RS00010;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=PKHYL_RS00010;old_locus_tag=PKHYL_00020
NZ_AP019516.1	Protein Homology	CDS	1118	2293	.	+	0	ID=cds-WP_240365692.1;Parent=gene-PKHYL_RS00010;Dbxref=Genbank:WP_240365692.1;Name=WP_240365692.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512380.1;locus_tag=PKHYL_RS00010;product=DNA polymerase III subunit beta;protein_id=WP_240365692.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2423	3655	.	+	.	ID=gene-PKHYL_RS00015;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=PKHYL_RS00015;old_locus_tag=PKHYL_00030
NZ_AP019516.1	Protein Homology	CDS	2423	3655	.	+	0	ID=cds-WP_240365693.1;Parent=gene-PKHYL_RS00015;Dbxref=Genbank:WP_240365693.1;Name=WP_240365693.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512381.1;locus_tag=PKHYL_RS00015;product=DNA replication and repair protein RecF;protein_id=WP_240365693.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	4187	6816	.	+	.	ID=gene-PKHYL_RS00020;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=pseudogene;locus_tag=PKHYL_RS00020;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	4187	6816	.	+	0	ID=cds-PKHYL_RS00020;Parent=gene-PKHYL_RS00020;Note=frameshifted;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512382.1;locus_tag=PKHYL_RS00020;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	6942	7513	.	+	.	ID=gene-PKHYL_RS00025;Name=PKHYL_RS00025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00025;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	6942	7513	.	+	0	ID=cds-PKHYL_RS00025;Parent=gene-PKHYL_RS00025;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197151.1;locus_tag=PKHYL_RS00025;product=manganese efflux pump MntP family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	7728	8764	.	-	.	ID=gene-PKHYL_RS00030;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=pseudogene;locus_tag=PKHYL_RS00030;old_locus_tag=PKHYL_00100;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	7728	8764	.	-	0	ID=cds-PKHYL_RS00030;Parent=gene-PKHYL_RS00030;Note=frameshifted;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279321.1;locus_tag=PKHYL_RS00030;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	8841	9533	.	-	.	ID=gene-PKHYL_RS00035;Name=PKHYL_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00035;old_locus_tag=PKHYL_00110
NZ_AP019516.1	Protein Homology	CDS	8841	9533	.	-	0	ID=cds-WP_071002660.1;Parent=gene-PKHYL_RS00035;Dbxref=Genbank:WP_071002660.1;Name=WP_071002660.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442408.1;locus_tag=PKHYL_RS00035;product=LysE family transporter;protein_id=WP_071002660.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	10047	10848	.	+	.	ID=gene-PKHYL_RS00040;Name=PKHYL_RS00040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00040;old_locus_tag=PKHYL_00120;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	10047	10848	.	+	0	ID=cds-PKHYL_RS00040;Parent=gene-PKHYL_RS00040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442409.1;locus_tag=PKHYL_RS00040;product=crotonase/enoyl-CoA hydratase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	11108	11317	.	+	.	ID=gene-PKHYL_RS00045;Name=PKHYL_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00045;old_locus_tag=PKHYL_00130
NZ_AP019516.1	GeneMarkS-2+	CDS	11108	11317	.	+	0	ID=cds-WP_240365694.1;Parent=gene-PKHYL_RS00045;Dbxref=Genbank:WP_240365694.1;Name=WP_240365694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00045;product=hypothetical protein;protein_id=WP_240365694.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	11341	11637	.	+	.	ID=gene-PKHYL_RS00050;Name=PKHYL_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00050;old_locus_tag=PKHYL_00140
NZ_AP019516.1	Protein Homology	CDS	11341	11637	.	+	0	ID=cds-WP_240365695.1;Parent=gene-PKHYL_RS00050;Dbxref=Genbank:WP_240365695.1;Name=WP_240365695.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033832.1;locus_tag=PKHYL_RS00050;product=sce7726 family protein;protein_id=WP_240365695.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	11957	12763	.	+	.	ID=gene-PKHYL_RS00055;Name=PKHYL_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00055;old_locus_tag=PKHYL_00160
NZ_AP019516.1	Protein Homology	CDS	11957	12763	.	+	0	ID=cds-WP_240365696.1;Parent=gene-PKHYL_RS00055;Dbxref=Genbank:WP_240365696.1;Name=WP_240365696.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033831.1;locus_tag=PKHYL_RS00055;product=sce7725 family protein;protein_id=WP_240365696.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	12903	13193	.	+	.	ID=gene-PKHYL_RS00060;Name=PKHYL_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00060;old_locus_tag=PKHYL_00170
NZ_AP019516.1	GeneMarkS-2+	CDS	12903	13193	.	+	0	ID=cds-WP_240365697.1;Parent=gene-PKHYL_RS00060;Dbxref=Genbank:WP_240365697.1;Name=WP_240365697.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00060;product=hypothetical protein;protein_id=WP_240365697.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	13451	13906	.	+	.	ID=gene-PKHYL_RS00065;Name=PKHYL_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00065;old_locus_tag=PKHYL_00190
NZ_AP019516.1	Protein Homology	CDS	13451	13906	.	+	0	ID=cds-WP_240365698.1;Parent=gene-PKHYL_RS00065;Dbxref=Genbank:WP_240365698.1;Name=WP_240365698.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020387.2;locus_tag=PKHYL_RS00065;product=RES domain-containing protein;protein_id=WP_240365698.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	14089	14601	.	-	.	ID=gene-PKHYL_RS00070;Name=PKHYL_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00070;old_locus_tag=PKHYL_00200
NZ_AP019516.1	Protein Homology	CDS	14089	14601	.	-	0	ID=cds-WP_240365699.1;Parent=gene-PKHYL_RS00070;Dbxref=Genbank:WP_240365699.1;Name=WP_240365699.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019498.2;locus_tag=PKHYL_RS00070;product=cupin domain-containing protein;protein_id=WP_240365699.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	14880	15943	.	+	.	ID=gene-PKHYL_RS00075;Name=PKHYL_RS00075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00075;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	14880	15943	.	+	0	ID=cds-PKHYL_RS00075;Parent=gene-PKHYL_RS00075;Note=frameshifted;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012382.2;locus_tag=PKHYL_RS00075;product=PatB family C-S lyase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	16031	16618	.	+	.	ID=gene-PKHYL_RS00080;Name=PKHYL_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00080;old_locus_tag=PKHYL_00230
NZ_AP019516.1	GeneMarkS-2+	CDS	16031	16618	.	+	0	ID=cds-WP_240365700.1;Parent=gene-PKHYL_RS00080;Dbxref=Genbank:WP_240365700.1;Name=WP_240365700.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00080;product=hypothetical protein;protein_id=WP_240365700.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	16844	17086	.	-	.	ID=gene-PKHYL_RS00085;Name=PKHYL_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00085;old_locus_tag=PKHYL_00240
NZ_AP019516.1	GeneMarkS-2+	CDS	16844	17086	.	-	0	ID=cds-WP_240365701.1;Parent=gene-PKHYL_RS00085;Dbxref=Genbank:WP_240365701.1;Name=WP_240365701.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00085;product=hypothetical protein;protein_id=WP_240365701.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	17049	17804	.	-	.	ID=gene-PKHYL_RS00090;Name=PKHYL_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00090;old_locus_tag=PKHYL_00250
NZ_AP019516.1	Protein Homology	CDS	17049	17804	.	-	0	ID=cds-WP_240365702.1;Parent=gene-PKHYL_RS00090;Dbxref=Genbank:WP_240365702.1;Name=WP_240365702.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021616.2;locus_tag=PKHYL_RS00090;product=glycosyltransferase;protein_id=WP_240365702.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	17879	19033	.	-	.	ID=gene-PKHYL_RS00095;Name=PKHYL_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00095;old_locus_tag=PKHYL_00260
NZ_AP019516.1	GeneMarkS-2+	CDS	17879	19033	.	-	0	ID=cds-WP_071002653.1;Parent=gene-PKHYL_RS00095;Dbxref=Genbank:WP_071002653.1;Name=WP_071002653.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00095;product=hypothetical protein;protein_id=WP_071002653.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	19037	20308	.	-	.	ID=gene-PKHYL_RS00100;Name=PKHYL_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00100;old_locus_tag=PKHYL_00270
NZ_AP019516.1	Protein Homology	CDS	19037	20308	.	-	0	ID=cds-WP_071002652.1;Parent=gene-PKHYL_RS00100;Dbxref=Genbank:WP_071002652.1;Name=WP_071002652.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024831.2;locus_tag=PKHYL_RS00100;product=glycosyltransferase;protein_id=WP_071002652.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	20430	21185	.	-	.	ID=gene-PKHYL_RS00105;Name=PKHYL_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00105;old_locus_tag=PKHYL_00290
NZ_AP019516.1	GeneMarkS-2+	CDS	20430	21185	.	-	0	ID=cds-WP_240365703.1;Parent=gene-PKHYL_RS00105;Dbxref=Genbank:WP_240365703.1;Name=WP_240365703.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00105;product=hypothetical protein;protein_id=WP_240365703.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	21089	21367	.	-	.	ID=gene-PKHYL_RS00110;Name=PKHYL_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00110
NZ_AP019516.1	GeneMarkS-2+	CDS	21089	21367	.	-	0	ID=cds-WP_240365704.1;Parent=gene-PKHYL_RS00110;Dbxref=Genbank:WP_240365704.1;Name=WP_240365704.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00110;product=hypothetical protein;protein_id=WP_240365704.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	21325	22032	.	-	.	ID=gene-PKHYL_RS00115;Name=PKHYL_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00115;old_locus_tag=PKHYL_00300
NZ_AP019516.1	Protein Homology	CDS	21325	22032	.	-	0	ID=cds-WP_240365705.1;Parent=gene-PKHYL_RS00115;Dbxref=Genbank:WP_240365705.1;Name=WP_240365705.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.2;locus_tag=PKHYL_RS00115;product=glycosyltransferase;protein_id=WP_240365705.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	22459	24066	.	+	.	ID=gene-PKHYL_RS00120;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=pseudogene;locus_tag=PKHYL_RS00120;old_locus_tag=PKHYL_00320;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	22459	24066	.	+	0	ID=cds-PKHYL_RS00120;Parent=gene-PKHYL_RS00120;Note=frameshifted;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005154414.1;locus_tag=PKHYL_RS00120;product=glutamine-hydrolyzing GMP synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	24172	26145	.	+	.	ID=gene-PKHYL_RS00125;Name=PKHYL_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00125;old_locus_tag=PKHYL_00340
NZ_AP019516.1	Protein Homology	CDS	24172	26145	.	+	0	ID=cds-WP_071002649.1;Parent=gene-PKHYL_RS00125;Dbxref=Genbank:WP_071002649.1;Name=WP_071002649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018677690.1;locus_tag=PKHYL_RS00125;product=DUF2075 domain-containing protein;protein_id=WP_071002649.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	26218	27222	.	-	.	ID=gene-PKHYL_RS00130;Name=PKHYL_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00130;old_locus_tag=PKHYL_00350
NZ_AP019516.1	Protein Homology	CDS	26218	27222	.	-	0	ID=cds-WP_071002648.1;Parent=gene-PKHYL_RS00130;Dbxref=Genbank:WP_071002648.1;Name=WP_071002648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442420.1;locus_tag=PKHYL_RS00130;product=YhdH/YhfP family quinone oxidoreductase;protein_id=WP_071002648.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	27588	28565	.	-	.	ID=gene-PKHYL_RS00135;Name=PKHYL_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00135;old_locus_tag=PKHYL_00360
NZ_AP019516.1	Protein Homology	CDS	27588	28565	.	-	0	ID=cds-WP_071002647.1;Parent=gene-PKHYL_RS00135;Dbxref=Genbank:WP_071002647.1;Name=WP_071002647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512395.1;locus_tag=PKHYL_RS00135;product=zinc-binding dehydrogenase;protein_id=WP_071002647.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	28921	29172	.	-	.	ID=gene-PKHYL_RS00140;Name=PKHYL_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00140;old_locus_tag=PKHYL_00370
NZ_AP019516.1	Protein Homology	CDS	28921	29172	.	-	0	ID=cds-WP_240365706.1;Parent=gene-PKHYL_RS00140;Dbxref=Genbank:WP_240365706.1;Name=WP_240365706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512396.1;locus_tag=PKHYL_RS00140;product=DUF2798 domain-containing protein;protein_id=WP_240365706.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	29394	29729	.	+	.	ID=gene-PKHYL_RS00145;Name=PKHYL_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00145;old_locus_tag=PKHYL_00380
NZ_AP019516.1	Protein Homology	CDS	29394	29729	.	+	0	ID=cds-WP_240365707.1;Parent=gene-PKHYL_RS00145;Dbxref=Genbank:WP_240365707.1;Name=WP_240365707.1;Ontology_term=GO:0006520,GO:0047689;gbkey=CDS;go_function=aspartate racemase activity|0047689||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: protein motif:HMM:TIGR00035.1;locus_tag=PKHYL_RS00145;product=amino acid racemase;protein_id=WP_240365707.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	29791	29949	.	-	.	ID=gene-PKHYL_RS00150;Name=PKHYL_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00150
NZ_AP019516.1	GeneMarkS-2+	CDS	29791	29949	.	-	0	ID=cds-WP_156770986.1;Parent=gene-PKHYL_RS00150;Dbxref=Genbank:WP_156770986.1;Name=WP_156770986.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00150;product=hypothetical protein;protein_id=WP_156770986.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	30360	31310	.	+	.	ID=gene-PKHYL_RS00155;Name=PKHYL_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00155;old_locus_tag=PKHYL_00390
NZ_AP019516.1	Protein Homology	CDS	30360	31310	.	+	0	ID=cds-WP_071002645.1;Parent=gene-PKHYL_RS00155;Dbxref=Genbank:WP_071002645.1;Name=WP_071002645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394717.1;locus_tag=PKHYL_RS00155;product=alpha/beta hydrolase;protein_id=WP_071002645.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	31312	31650	.	-	.	ID=gene-PKHYL_RS00160;Name=PKHYL_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00160;old_locus_tag=PKHYL_00400
NZ_AP019516.1	Protein Homology	CDS	31312	31650	.	-	0	ID=cds-WP_240365708.1;Parent=gene-PKHYL_RS00160;Dbxref=Genbank:WP_240365708.1;Name=WP_240365708.1;Ontology_term=GO:0018580;gbkey=CDS;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: protein motif:HMM:NF015047.2;locus_tag=PKHYL_RS00160;product=nitronate monooxygenase;protein_id=WP_240365708.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	31647	32228	.	-	.	ID=gene-PKHYL_RS00165;Name=PKHYL_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00165;old_locus_tag=PKHYL_00410
NZ_AP019516.1	Protein Homology	CDS	31647	32228	.	-	0	ID=cds-WP_240365709.1;Parent=gene-PKHYL_RS00165;Dbxref=Genbank:WP_240365709.1;Name=WP_240365709.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015047.2;locus_tag=PKHYL_RS00165;product=nitronate monooxygenase;protein_id=WP_240365709.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	32571	33479	.	+	.	ID=gene-PKHYL_RS00170;Name=PKHYL_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00170;old_locus_tag=PKHYL_00420
NZ_AP019516.1	Protein Homology	CDS	32571	33479	.	+	0	ID=cds-WP_071002643.1;Parent=gene-PKHYL_RS00170;Dbxref=Genbank:WP_071002643.1;Name=WP_071002643.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037530.2;locus_tag=PKHYL_RS00170;product=abortive infection family protein;protein_id=WP_071002643.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	33981	34523	.	-	.	ID=gene-PKHYL_RS00175;Name=PKHYL_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00175;old_locus_tag=PKHYL_00440
NZ_AP019516.1	Protein Homology	CDS	33981	34523	.	-	0	ID=cds-WP_071002642.1;Parent=gene-PKHYL_RS00175;Dbxref=Genbank:WP_071002642.1;Name=WP_071002642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512404.1;locus_tag=PKHYL_RS00175;product=acyl-CoA thioesterase;protein_id=WP_071002642.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	34598	35645	.	-	.	ID=gene-PKHYL_RS00180;Name=PKHYL_RS00180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00180;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	34598	35645	.	-	0	ID=cds-PKHYL_RS00180;Parent=gene-PKHYL_RS00180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279335.1;locus_tag=PKHYL_RS00180;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	35982	36584	.	-	.	ID=gene-PKHYL_RS00185;Name=PKHYL_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00185;old_locus_tag=PKHYL_00470
NZ_AP019516.1	Protein Homology	CDS	35982	36584	.	-	0	ID=cds-WP_071002640.1;Parent=gene-PKHYL_RS00185;Dbxref=Genbank:WP_071002640.1;Name=WP_071002640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197635.1;locus_tag=PKHYL_RS00185;product=YigZ family protein;protein_id=WP_071002640.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	36782	37490	.	+	.	ID=gene-PKHYL_RS00190;Name=PKHYL_RS00190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00190;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	36782	37490	.	+	0	ID=cds-PKHYL_RS00190;Parent=gene-PKHYL_RS00190;Note=frameshifted%3B internal stop;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662138.1;locus_tag=PKHYL_RS00190;product=pseudouridine synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	37821	38132	.	+	.	ID=gene-PKHYL_RS00195;Name=PKHYL_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00195
NZ_AP019516.1	GeneMarkS-2+	CDS	37821	38132	.	+	0	ID=cds-WP_240365710.1;Parent=gene-PKHYL_RS00195;Dbxref=Genbank:WP_240365710.1;Name=WP_240365710.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00195;product=hypothetical protein;protein_id=WP_240365710.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	38161	38820	.	+	.	ID=gene-PKHYL_RS00200;Name=PKHYL_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00200;old_locus_tag=PKHYL_00500
NZ_AP019516.1	Protein Homology	CDS	38161	38820	.	+	0	ID=cds-WP_240365711.1;Parent=gene-PKHYL_RS00200;Dbxref=Genbank:WP_240365711.1;Name=WP_240365711.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024498.2;locus_tag=PKHYL_RS00200;product=thioredoxin fold domain-containing protein;protein_id=WP_240365711.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	39028	39633	.	-	.	ID=gene-PKHYL_RS00205;Name=PKHYL_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00205;old_locus_tag=PKHYL_00510
NZ_AP019516.1	Protein Homology	CDS	39028	39633	.	-	0	ID=cds-WP_240365712.1;Parent=gene-PKHYL_RS00205;Dbxref=Genbank:WP_240365712.1;Name=WP_240365712.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022607.2;locus_tag=PKHYL_RS00205;product=DUF2939 domain-containing protein;protein_id=WP_240365712.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	40123	41216	.	+	.	ID=gene-PKHYL_RS00210;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=pseudogene;locus_tag=PKHYL_RS00210;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	40123	41216	.	+	0	ID=cds-PKHYL_RS00210;Parent=gene-PKHYL_RS00210;Note=frameshifted;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512410.1;locus_tag=PKHYL_RS00210;product=molecular chaperone DnaJ;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	41402	42231	.	+	.	ID=gene-PKHYL_RS00215;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=pseudogene;locus_tag=PKHYL_RS00215;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	41402	42231	.	+	0	ID=cds-PKHYL_RS00215;Parent=gene-PKHYL_RS00215;Note=frameshifted;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442434.1;locus_tag=PKHYL_RS00215;product=4-hydroxy-tetrahydrodipicolinate reductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	42369	42725	.	+	.	ID=gene-PKHYL_RS00220;Name=PKHYL_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00220;old_locus_tag=PKHYL_00560
NZ_AP019516.1	Protein Homology	CDS	42369	42725	.	+	0	ID=cds-WP_071002712.1;Parent=gene-PKHYL_RS00220;Dbxref=Genbank:WP_071002712.1;Name=WP_071002712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442976.1;locus_tag=PKHYL_RS00220;product=IS630 transposase-related protein;protein_id=WP_071002712.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	42706	43218	.	+	.	ID=gene-PKHYL_RS00225;Name=PKHYL_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00225;old_locus_tag=PKHYL_00570
NZ_AP019516.1	Protein Homology	CDS	42706	43218	.	+	0	ID=cds-WP_227517133.1;Parent=gene-PKHYL_RS00225;Dbxref=Genbank:WP_227517133.1;Name=WP_227517133.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033545.0;locus_tag=PKHYL_RS00225;product=IS630 family transposase;protein_id=WP_227517133.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	43238	43921	.	+	.	ID=gene-PKHYL_RS00230;Name=PKHYL_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00230;old_locus_tag=PKHYL_00580
NZ_AP019516.1	GeneMarkS-2+	CDS	43238	43921	.	+	0	ID=cds-WP_240365713.1;Parent=gene-PKHYL_RS00230;Dbxref=Genbank:WP_240365713.1;Name=WP_240365713.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00230;product=hypothetical protein;protein_id=WP_240365713.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	43881	44090	.	+	.	ID=gene-PKHYL_RS00235;Name=PKHYL_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00235
NZ_AP019516.1	GeneMarkS-2+	CDS	43881	44090	.	+	0	ID=cds-WP_240365714.1;Parent=gene-PKHYL_RS00235;Dbxref=Genbank:WP_240365714.1;Name=WP_240365714.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00235;product=hypothetical protein;protein_id=WP_240365714.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	44173	44877	.	-	.	ID=gene-PKHYL_RS16980;Name=PKHYL_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16980;old_locus_tag=PKHYL_00590
NZ_AP019516.1	Protein Homology	CDS	44173	44877	.	-	0	ID=cds-WP_269778205.1;Parent=gene-PKHYL_RS16980;Dbxref=Genbank:WP_269778205.1;Name=WP_269778205.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014803.2;locus_tag=PKHYL_RS16980;product=hypothetical protein;protein_id=WP_269778205.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	44861	45355	.	-	.	ID=gene-PKHYL_RS16985;Name=PKHYL_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16985;old_locus_tag=PKHYL_00600
NZ_AP019516.1	Protein Homology	CDS	44861	45355	.	-	0	ID=cds-WP_269778206.1;Parent=gene-PKHYL_RS16985;Dbxref=Genbank:WP_269778206.1;Name=WP_269778206.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014803.2;locus_tag=PKHYL_RS16985;product=hypothetical protein;protein_id=WP_269778206.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	45545	46018	.	-	.	ID=gene-PKHYL_RS00250;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=PKHYL_RS00250;old_locus_tag=PKHYL_00610
NZ_AP019516.1	Protein Homology	CDS	45545	46018	.	-	0	ID=cds-WP_269778207.1;Parent=gene-PKHYL_RS00250;Dbxref=Genbank:WP_269778207.1;Name=WP_269778207.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: protein motif:HMM:TIGR00079.1;locus_tag=PKHYL_RS00250;product=peptide deformylase;protein_id=WP_269778207.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	46218	46607	.	+	.	ID=gene-PKHYL_RS00255;Name=PKHYL_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00255;old_locus_tag=PKHYL_00620
NZ_AP019516.1	Protein Homology	CDS	46218	46607	.	+	0	ID=cds-WP_240365635.1;Parent=gene-PKHYL_RS00255;Dbxref=Genbank:WP_240365635.1;Name=WP_240365635.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024908.2;locus_tag=PKHYL_RS00255;product=transposase;protein_id=WP_240365635.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	46679	47566	.	+	.	ID=gene-PKHYL_RS00260;Name=PKHYL_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00260;old_locus_tag=PKHYL_00630
NZ_AP019516.1	Protein Homology	CDS	46679	47566	.	+	0	ID=cds-WP_240365636.1;Parent=gene-PKHYL_RS00260;Dbxref=Genbank:WP_240365636.1;Name=WP_240365636.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=PKHYL_RS00260;product=IS3 family transposase;protein_id=WP_240365636.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	47641	47895	.	-	.	ID=gene-PKHYL_RS00265;Name=PKHYL_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00265;old_locus_tag=PKHYL_00640
NZ_AP019516.1	Protein Homology	CDS	47641	47895	.	-	0	ID=cds-WP_058024727.1;Parent=gene-PKHYL_RS00265;Dbxref=Genbank:WP_058024727.1;Name=WP_058024727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279344.1;locus_tag=PKHYL_RS00265;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_058024727.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	48276	49764	.	-	.	ID=gene-PKHYL_RS00270;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=pseudogene;locus_tag=PKHYL_RS00270;old_locus_tag=PKHYL_00650;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	48276	49764	.	-	0	ID=cds-PKHYL_RS00270;Parent=gene-PKHYL_RS00270;Note=frameshifted;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519126.1;locus_tag=PKHYL_RS00270;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	50048	50518	.	-	.	ID=gene-PKHYL_RS00275;Name=PKHYL_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00275;old_locus_tag=PKHYL_00660
NZ_AP019516.1	Protein Homology	CDS	50048	50518	.	-	0	ID=cds-WP_240365715.1;Parent=gene-PKHYL_RS00275;Dbxref=Genbank:WP_240365715.1;Name=WP_240365715.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016087.2;locus_tag=PKHYL_RS00275;product=copper resistance protein NlpE N-terminal domain-containing protein;protein_id=WP_240365715.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	51104	51635	.	-	.	ID=gene-PKHYL_RS00280;Name=PKHYL_RS00280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00280;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	51104	51635	.	-	0	ID=cds-PKHYL_RS00280;Parent=gene-PKHYL_RS00280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279347.1;locus_tag=PKHYL_RS00280;product=disulfide bond formation protein B;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	51689	53265	.	-	.	ID=gene-PKHYL_RS00285;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=pseudogene;locus_tag=PKHYL_RS00285;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	51689	53265	.	-	0	ID=cds-PKHYL_RS00285;Parent=gene-PKHYL_RS00285;Note=frameshifted;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442441.1;locus_tag=PKHYL_RS00285;product=glutamate--cysteine ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	53609	53989	.	-	.	ID=gene-PKHYL_RS00290;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=PKHYL_RS00290;old_locus_tag=PKHYL_00710
NZ_AP019516.1	Protein Homology	CDS	53609	53989	.	-	0	ID=cds-WP_058024722.1;Parent=gene-PKHYL_RS00290;Dbxref=Genbank:WP_058024722.1;Name=WP_058024722.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279349.1;locus_tag=PKHYL_RS00290;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_058024722.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	54544	56572	.	+	.	ID=gene-PKHYL_RS00295;Name=PKHYL_RS00295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00295;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	54544	56572	.	+	0	ID=cds-PKHYL_RS00295;Parent=gene-PKHYL_RS00295;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519816.1;locus_tag=PKHYL_RS00295;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	56677	57039	.	-	.	ID=gene-PKHYL_RS00300;Name=PKHYL_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00300;old_locus_tag=PKHYL_00750
NZ_AP019516.1	Protein Homology	CDS	56677	57039	.	-	0	ID=cds-WP_058024720.1;Parent=gene-PKHYL_RS00300;Dbxref=Genbank:WP_058024720.1;Name=WP_058024720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512421.1;locus_tag=PKHYL_RS00300;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_058024720.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	57660	58217	.	-	.	ID=gene-PKHYL_RS00305;Name=PKHYL_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00305;old_locus_tag=PKHYL_00760
NZ_AP019516.1	Protein Homology	CDS	57660	58217	.	-	0	ID=cds-WP_240366564.1;Parent=gene-PKHYL_RS00305;Dbxref=Genbank:WP_240366564.1;Name=WP_240366564.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013752.2;locus_tag=PKHYL_RS00305;product=transposase;protein_id=WP_240366564.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	58109	58753	.	-	.	ID=gene-PKHYL_RS00310;Name=PKHYL_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00310;old_locus_tag=PKHYL_00770
NZ_AP019516.1	GeneMarkS-2+	CDS	58109	58753	.	-	0	ID=cds-WP_240365716.1;Parent=gene-PKHYL_RS00310;Dbxref=Genbank:WP_240365716.1;Name=WP_240365716.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00310;product=hypothetical protein;protein_id=WP_240365716.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	59017	59316	.	+	.	ID=gene-PKHYL_RS00315;Name=PKHYL_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00315;old_locus_tag=PKHYL_00780
NZ_AP019516.1	Protein Homology	CDS	59017	59316	.	+	0	ID=cds-WP_071002626.1;Parent=gene-PKHYL_RS00315;Dbxref=Genbank:WP_071002626.1;Name=WP_071002626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005004884.1;locus_tag=PKHYL_RS00315;product=Bor family protein;protein_id=WP_071002626.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	59329	59622	.	+	.	ID=gene-PKHYL_RS00320;Name=PKHYL_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00320;old_locus_tag=PKHYL_00790
NZ_AP019516.1	Protein Homology	CDS	59329	59622	.	+	0	ID=cds-WP_071002625.1;Parent=gene-PKHYL_RS00320;Dbxref=Genbank:WP_071002625.1;Name=WP_071002625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005004885.1;locus_tag=PKHYL_RS00320;product=Bor family protein;protein_id=WP_071002625.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	59953	60970	.	+	.	ID=gene-PKHYL_RS00325;Name=PKHYL_RS00325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00325;old_locus_tag=PKHYL_00800;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	59953	60970	.	+	0	ID=cds-PKHYL_RS00325;Parent=gene-PKHYL_RS00325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442444.1;locus_tag=PKHYL_RS00325;product=DnaJ domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	61071	61394	.	+	.	ID=gene-PKHYL_RS00330;Name=PKHYL_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00330;old_locus_tag=PKHYL_00810
NZ_AP019516.1	Protein Homology	CDS	61071	61394	.	+	0	ID=cds-WP_071002623.1;Parent=gene-PKHYL_RS00330;Dbxref=Genbank:WP_071002623.1;Name=WP_071002623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512423.1;locus_tag=PKHYL_RS00330;product=MerR family transcriptional regulator;protein_id=WP_071002623.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	61471	62674	.	-	.	ID=gene-PKHYL_RS00335;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=pseudogene;locus_tag=PKHYL_RS00335;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	61471	62674	.	-	0	ID=cds-PKHYL_RS00335;Parent=gene-PKHYL_RS00335;Note=frameshifted;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279354.1;locus_tag=PKHYL_RS00335;product=serine/threonine transporter SstT;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	63032	63433	.	-	.	ID=gene-PKHYL_RS00340;Name=PKHYL_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00340;old_locus_tag=PKHYL_00840
NZ_AP019516.1	Protein Homology	CDS	63032	63433	.	-	0	ID=cds-WP_240365717.1;Parent=gene-PKHYL_RS00340;Dbxref=Genbank:WP_240365717.1;Name=WP_240365717.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512425.1;locus_tag=PKHYL_RS00340;product=DNA polymerase III subunit chi;protein_id=WP_240365717.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	63574	65231	.	-	.	ID=gene-PKHYL_RS00345;Name=PKHYL_RS00345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00345;old_locus_tag=PKHYL_00850;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	63574	65231	.	-	0	ID=cds-PKHYL_RS00345;Parent=gene-PKHYL_RS00345;Note=frameshifted;Ontology_term=GO:0019538,GO:0070006;gbkey=CDS;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442447.1;locus_tag=PKHYL_RS00345;product=leucyl aminopeptidase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	65412	65612	.	-	.	ID=gene-PKHYL_RS16990;Name=PKHYL_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16990;old_locus_tag=PKHYL_00870
NZ_AP019516.1	Protein Homology	CDS	65412	65612	.	-	0	ID=cds-WP_269778208.1;Parent=gene-PKHYL_RS16990;Dbxref=Genbank:WP_269778208.1;Name=WP_269778208.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013053.2;locus_tag=PKHYL_RS16990;product=isochorismatase family protein;protein_id=WP_269778208.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	65578	66030	.	-	.	ID=gene-PKHYL_RS16995;Name=PKHYL_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16995;old_locus_tag=PKHYL_00880
NZ_AP019516.1	Protein Homology	CDS	65578	66030	.	-	0	ID=cds-WP_269778209.1;Parent=gene-PKHYL_RS16995;Dbxref=Genbank:WP_269778209.1;Name=WP_269778209.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013053.2;locus_tag=PKHYL_RS16995;product=isochorismatase family protein;protein_id=WP_269778209.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	66515	67804	.	+	.	ID=gene-PKHYL_RS00355;Name=PKHYL_RS00355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00355;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	66515	67804	.	+	0	ID=cds-PKHYL_RS00355;Parent=gene-PKHYL_RS00355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512428.1;locus_tag=PKHYL_RS00355;product=LPS export ABC transporter permease LptF;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	67804	69012	.	+	.	ID=gene-PKHYL_RS00360;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=PKHYL_RS00360;old_locus_tag=PKHYL_00920
NZ_AP019516.1	Protein Homology	CDS	67804	69012	.	+	0	ID=cds-WP_071002618.1;Parent=gene-PKHYL_RS00360;Dbxref=Genbank:WP_071002618.1;Name=WP_071002618.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512429.1;locus_tag=PKHYL_RS00360;product=LPS export ABC transporter permease LptG;protein_id=WP_071002618.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	69082	69345	.	-	.	ID=gene-PKHYL_RS00365;Name=PKHYL_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00365;old_locus_tag=PKHYL_00930
NZ_AP019516.1	Protein Homology	CDS	69082	69345	.	-	0	ID=cds-WP_240365718.1;Parent=gene-PKHYL_RS00365;Dbxref=Genbank:WP_240365718.1;Name=WP_240365718.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017026.2;locus_tag=PKHYL_RS00365;product=class I SAM-dependent methyltransferase;protein_id=WP_240365718.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	69384	69560	.	-	.	ID=gene-PKHYL_RS00370;Name=PKHYL_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00370;old_locus_tag=PKHYL_00940
NZ_AP019516.1	Protein Homology	CDS	69384	69560	.	-	0	ID=cds-WP_240365719.1;Parent=gene-PKHYL_RS00370;Dbxref=Genbank:WP_240365719.1;Name=WP_240365719.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF017026.2;locus_tag=PKHYL_RS00370;product=methyltransferase;protein_id=WP_240365719.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	69929	70636	.	+	.	ID=gene-PKHYL_RS00375;Name=PKHYL_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00375;old_locus_tag=PKHYL_00950
NZ_AP019516.1	Protein Homology	CDS	69929	70636	.	+	0	ID=cds-WP_227517129.1;Parent=gene-PKHYL_RS00375;Dbxref=Genbank:WP_227517129.1;Name=WP_227517129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700622.1;locus_tag=PKHYL_RS00375;product=hypothetical protein;protein_id=WP_227517129.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	71316	71618	.	-	.	ID=gene-PKHYL_RS00380;Name=PKHYL_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00380;old_locus_tag=PKHYL_00960
NZ_AP019516.1	Protein Homology	CDS	71316	71618	.	-	0	ID=cds-WP_240365720.1;Parent=gene-PKHYL_RS00380;Dbxref=Genbank:WP_240365720.1;Name=WP_240365720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513686.1;locus_tag=PKHYL_RS00380;product=DUF3817 domain-containing protein;protein_id=WP_240365720.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	71666	72604	.	-	.	ID=gene-PKHYL_RS00385;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=PKHYL_RS00385;old_locus_tag=PKHYL_00970
NZ_AP019516.1	Protein Homology	CDS	71666	72604	.	-	0	ID=cds-WP_071002615.1;Parent=gene-PKHYL_RS00385;Dbxref=Genbank:WP_071002615.1;Name=WP_071002615.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512432.1;locus_tag=PKHYL_RS00385;product=site-specific tyrosine recombinase XerD;protein_id=WP_071002615.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	72753	72959	.	-	.	ID=gene-PKHYL_RS00390;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=pseudogene;locus_tag=PKHYL_RS00390;partial=true;pseudo=true;start_range=.,72753
NZ_AP019516.1	Protein Homology	CDS	72753	72959	.	-	0	ID=cds-PKHYL_RS00390;Parent=gene-PKHYL_RS00390;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512434.1;locus_tag=PKHYL_RS00390;partial=true;product=sulfurtransferase TusA;pseudo=true;start_range=.,72753;transl_table=11
NZ_AP019516.1	RefSeq	gene	73017	73520	.	-	.	ID=gene-PKHYL_RS00395;Name=PKHYL_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00395;old_locus_tag=PKHYL_00990
NZ_AP019516.1	Protein Homology	CDS	73017	73520	.	-	0	ID=cds-WP_071002613.1;Parent=gene-PKHYL_RS00395;Dbxref=Genbank:WP_071002613.1;Name=WP_071002613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442454.1;locus_tag=PKHYL_RS00395;product=hypothetical protein;protein_id=WP_071002613.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	73606	74106	.	-	.	ID=gene-PKHYL_RS00400;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=PKHYL_RS00400;old_locus_tag=PKHYL_01000
NZ_AP019516.1	Protein Homology	CDS	73606	74106	.	-	0	ID=cds-WP_071003723.1;Parent=gene-PKHYL_RS00400;Dbxref=Genbank:WP_071003723.1;Name=WP_071003723.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197719.1;locus_tag=PKHYL_RS00400;product=Holliday junction resolvase RuvX;protein_id=WP_071003723.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	74233	74796	.	-	.	ID=gene-PKHYL_RS00405;Name=PKHYL_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00405;old_locus_tag=PKHYL_01010
NZ_AP019516.1	Protein Homology	CDS	74233	74796	.	-	0	ID=cds-WP_071002612.1;Parent=gene-PKHYL_RS00405;Dbxref=Genbank:WP_071002612.1;Name=WP_071002612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279370.1;locus_tag=PKHYL_RS00405;product=YqgE/AlgH family protein;protein_id=WP_071002612.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	74954	76631	.	-	.	ID=gene-PKHYL_RS00410;Name=recN;gbkey=Gene;gene=recN;gene_biotype=pseudogene;locus_tag=PKHYL_RS00410;old_locus_tag=PKHYL_01020;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	74954	76631	.	-	0	ID=cds-PKHYL_RS00410;Parent=gene-PKHYL_RS00410;Note=frameshifted;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279371.1;locus_tag=PKHYL_RS00410;product=DNA repair protein RecN;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	77351	77686	.	+	.	ID=gene-PKHYL_RS00415;Name=PKHYL_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00415;old_locus_tag=PKHYL_01030
NZ_AP019516.1	Protein Homology	CDS	77351	77686	.	+	0	ID=cds-WP_058023616.1;Parent=gene-PKHYL_RS00415;Dbxref=Genbank:WP_058023616.1;Name=WP_058023616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197725.1;locus_tag=PKHYL_RS00415;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_058023616.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	77933	78704	.	+	.	ID=gene-PKHYL_RS00420;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=pseudogene;locus_tag=PKHYL_RS00420;old_locus_tag=PKHYL_01040;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	77933	78704	.	+	0	ID=cds-PKHYL_RS00420;Parent=gene-PKHYL_RS00420;Note=frameshifted;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197727.1;locus_tag=PKHYL_RS00420;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	78667	79353	.	-	.	ID=gene-PKHYL_RS00425;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=pseudogene;locus_tag=PKHYL_RS00425;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	78667	79353	.	-	0	ID=cds-PKHYL_RS00425;Parent=gene-PKHYL_RS00425;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.%3B frameshifted;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197729.1;locus_tag=PKHYL_RS00425;product=dephospho-CoA kinase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	79458	80361	.	-	.	ID=gene-PKHYL_RS00430;Name=PKHYL_RS00430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00430;old_locus_tag=PKHYL_01070;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	79458	80361	.	-	0	ID=cds-PKHYL_RS00430;Parent=gene-PKHYL_RS00430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197731.1;locus_tag=PKHYL_RS00430;product=A24 family peptidase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	80369	81590	.	-	.	ID=gene-PKHYL_RS00435;Name=PKHYL_RS00435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00435;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	80369	81590	.	-	0	ID=cds-PKHYL_RS00435;Parent=gene-PKHYL_RS00435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016653221.1;locus_tag=PKHYL_RS00435;product=type II secretion system F family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	82078	83792	.	-	.	ID=gene-PKHYL_RS00440;Name=pilB;gbkey=Gene;gene=pilB;gene_biotype=pseudogene;locus_tag=PKHYL_RS00440;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	82078	83792	.	-	0	ID=cds-PKHYL_RS00440;Parent=gene-PKHYL_RS00440;Note=frameshifted;Ontology_term=GO:0009297,GO:0016887;gbkey=CDS;gene=pilB;go_function=ATP hydrolysis activity|0016887||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004692712.1;locus_tag=PKHYL_RS00440;product=type IV-A pilus assembly ATPase PilB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	84181	84993	.	+	.	ID=gene-PKHYL_RS00445;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=PKHYL_RS00445;old_locus_tag=PKHYL_01120
NZ_AP019516.1	Protein Homology	CDS	84181	84993	.	+	0	ID=cds-WP_240365721.1;Parent=gene-PKHYL_RS00445;Dbxref=Genbank:WP_240365721.1;Name=WP_240365721.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512445.1;locus_tag=PKHYL_RS00445;product=triose-phosphate isomerase;protein_id=WP_240365721.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	85209	85517	.	+	.	ID=gene-PKHYL_RS00450;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=PKHYL_RS00450;old_locus_tag=PKHYL_01130
NZ_AP019516.1	Protein Homology	CDS	85209	85517	.	+	0	ID=cds-WP_021814138.1;Parent=gene-PKHYL_RS00450;Dbxref=Genbank:WP_021814138.1;Name=WP_021814138.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279379.1;locus_tag=PKHYL_RS00450;product=preprotein translocase subunit SecG;protein_id=WP_021814138.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	85660	85742	.	+	.	ID=gene-PKHYL_RS00455;Name=PKHYL_RS00455;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS00455;old_locus_tag=PKHYL_t00010
NZ_AP019516.1	tRNAscan-SE	tRNA	85660	85742	.	+	.	ID=rna-PKHYL_RS00455;Parent=gene-PKHYL_RS00455;anticodon=(pos:85693..85695);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS00455;product=tRNA-Leu
NZ_AP019516.1	tRNAscan-SE	exon	85660	85742	.	+	.	ID=exon-PKHYL_RS00455-1;Parent=rna-PKHYL_RS00455;anticodon=(pos:85693..85695);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS00455;product=tRNA-Leu
NZ_AP019516.1	RefSeq	gene	85867	85943	.	+	.	ID=gene-PKHYL_RS00460;Name=PKHYL_RS00460;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS00460;old_locus_tag=PKHYL_t00020
NZ_AP019516.1	tRNAscan-SE	tRNA	85867	85943	.	+	.	ID=rna-PKHYL_RS00460;Parent=gene-PKHYL_RS00460;anticodon=(pos:85901..85903);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS00460;product=tRNA-Met
NZ_AP019516.1	tRNAscan-SE	exon	85867	85943	.	+	.	ID=exon-PKHYL_RS00460-1;Parent=rna-PKHYL_RS00460;anticodon=(pos:85901..85903);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS00460;product=tRNA-Met
NZ_AP019516.1	RefSeq	gene	86384	86884	.	+	.	ID=gene-PKHYL_RS00465;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=PKHYL_RS00465;old_locus_tag=PKHYL_01140
NZ_AP019516.1	Protein Homology	CDS	86384	86884	.	+	0	ID=cds-WP_058023609.1;Parent=gene-PKHYL_RS00465;Dbxref=Genbank:WP_058023609.1;Name=WP_058023609.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279380.1;locus_tag=PKHYL_RS00465;product=ribosome maturation factor RimP;protein_id=WP_058023609.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	87022	88506	.	+	.	ID=gene-PKHYL_RS00470;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=PKHYL_RS00470;old_locus_tag=PKHYL_01150
NZ_AP019516.1	Protein Homology	CDS	87022	88506	.	+	0	ID=cds-WP_071002604.1;Parent=gene-PKHYL_RS00470;Dbxref=Genbank:WP_071002604.1;Name=WP_071002604.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197744.1;locus_tag=PKHYL_RS00470;product=transcription termination factor NusA;protein_id=WP_071002604.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	88658	91392	.	+	.	ID=gene-PKHYL_RS00475;Name=infB;gbkey=Gene;gene=infB;gene_biotype=pseudogene;locus_tag=PKHYL_RS00475;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	88658	91392	.	+	0	ID=cds-PKHYL_RS00475;Parent=gene-PKHYL_RS00475;Note=frameshifted;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959452.1;locus_tag=PKHYL_RS00475;product=translation initiation factor IF-2;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	91595	91984	.	+	.	ID=gene-PKHYL_RS00480;Name=PKHYL_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00480;old_locus_tag=PKHYL_01200
NZ_AP019516.1	Protein Homology	CDS	91595	91984	.	+	0	ID=cds-WP_071002602.1;Parent=gene-PKHYL_RS00480;Dbxref=Genbank:WP_071002602.1;Name=WP_071002602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007115084.1;locus_tag=PKHYL_RS00480;product=ribosome-binding factor A;protein_id=WP_071002602.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	92089	93081	.	+	.	ID=gene-PKHYL_RS00485;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=PKHYL_RS00485;old_locus_tag=PKHYL_01210
NZ_AP019516.1	Protein Homology	CDS	92089	93081	.	+	0	ID=cds-WP_240366565.1;Parent=gene-PKHYL_RS00485;Dbxref=Genbank:WP_240366565.1;Name=WP_240366565.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197751.1;locus_tag=PKHYL_RS00485;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_240366565.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	93416	93940	.	+	.	ID=gene-PKHYL_RS00490;Name=PKHYL_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00490;old_locus_tag=PKHYL_01220
NZ_AP019516.1	Protein Homology	CDS	93416	93940	.	+	0	ID=cds-WP_071002600.1;Parent=gene-PKHYL_RS00490;Dbxref=Genbank:WP_071002600.1;Name=WP_071002600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442466.1;locus_tag=PKHYL_RS00490;product=type 1 glutamine amidotransferase;protein_id=WP_071002600.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	94033	94194	.	+	.	ID=gene-PKHYL_RS00495;Name=PKHYL_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00495;old_locus_tag=PKHYL_01230
NZ_AP019516.1	GeneMarkS-2+	CDS	94033	94194	.	+	0	ID=cds-WP_156770984.1;Parent=gene-PKHYL_RS00495;Dbxref=Genbank:WP_156770984.1;Name=WP_156770984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00495;product=hypothetical protein;protein_id=WP_156770984.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	94871	95137	.	+	.	ID=gene-PKHYL_RS00500;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=PKHYL_RS00500;old_locus_tag=PKHYL_01240
NZ_AP019516.1	Protein Homology	CDS	94871	95137	.	+	0	ID=cds-WP_058023603.1;Parent=gene-PKHYL_RS00500;Dbxref=Genbank:WP_058023603.1;Name=WP_058023603.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512454.1;locus_tag=PKHYL_RS00500;product=30S ribosomal protein S15;protein_id=WP_058023603.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	95860	97961	.	+	.	ID=gene-PKHYL_RS00505;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=pseudogene;locus_tag=PKHYL_RS00505;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	95860	97961	.	+	0	ID=cds-PKHYL_RS00505;Parent=gene-PKHYL_RS00505;Note=frameshifted;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279387.1;locus_tag=PKHYL_RS00505;product=polyribonucleotide nucleotidyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	98071	98634	.	-	.	ID=gene-PKHYL_RS00510;Name=PKHYL_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00510;old_locus_tag=PKHYL_01270
NZ_AP019516.1	Protein Homology	CDS	98071	98634	.	-	0	ID=cds-WP_071002598.1;Parent=gene-PKHYL_RS00510;Dbxref=Genbank:WP_071002598.1;Name=WP_071002598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200721.1;locus_tag=PKHYL_RS00510;product=hypothetical protein;protein_id=WP_071002598.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	98663	99196	.	-	.	ID=gene-PKHYL_RS00515;Name=PKHYL_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00515;old_locus_tag=PKHYL_01280
NZ_AP019516.1	Protein Homology	CDS	98663	99196	.	-	0	ID=cds-WP_240365722.1;Parent=gene-PKHYL_RS00515;Dbxref=Genbank:WP_240365722.1;Name=WP_240365722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279389.1;locus_tag=PKHYL_RS00515;product=hypothetical protein;protein_id=WP_240365722.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	99353	99610	.	-	.	ID=gene-PKHYL_RS00520;Name=PKHYL_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00520;old_locus_tag=PKHYL_01290
NZ_AP019516.1	Protein Homology	CDS	99353	99610	.	-	0	ID=cds-WP_071002596.1;Parent=gene-PKHYL_RS00520;Dbxref=Genbank:WP_071002596.1;Name=WP_071002596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442472.1;locus_tag=PKHYL_RS00520;product=YheV family putative metal-binding protein;protein_id=WP_071002596.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	99611	101812	.	-	.	ID=gene-PKHYL_RS00525;Name=PKHYL_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00525;old_locus_tag=PKHYL_01300
NZ_AP019516.1	Protein Homology	CDS	99611	101812	.	-	0	ID=cds-WP_071002595.1;Parent=gene-PKHYL_RS00525;Dbxref=Genbank:WP_071002595.1;Name=WP_071002595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442473.1;locus_tag=PKHYL_RS00525;product=M3 family metallopeptidase;protein_id=WP_071002595.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	102517	102666	.	+	.	ID=gene-PKHYL_RS00530;Name=PKHYL_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00530;old_locus_tag=PKHYL_01310
NZ_AP019516.1	GeneMarkS-2+	CDS	102517	102666	.	+	0	ID=cds-WP_240365723.1;Parent=gene-PKHYL_RS00530;Dbxref=Genbank:WP_240365723.1;Name=WP_240365723.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00530;product=hypothetical protein;protein_id=WP_240365723.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	102638	103630	.	+	.	ID=gene-PKHYL_RS00535;Name=PKHYL_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00535;old_locus_tag=PKHYL_01320
NZ_AP019516.1	Protein Homology	CDS	102638	103630	.	+	0	ID=cds-WP_240365724.1;Parent=gene-PKHYL_RS00535;Dbxref=Genbank:WP_240365724.1;Name=WP_240365724.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037527.2;locus_tag=PKHYL_RS00535;product=hypothetical protein;protein_id=WP_240365724.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	103834	104589	.	+	.	ID=gene-PKHYL_RS00540;Name=PKHYL_RS00540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00540;old_locus_tag=PKHYL_01330;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	103834	104589	.	+	0	ID=cds-PKHYL_RS00540;Parent=gene-PKHYL_RS00540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200741.1;locus_tag=PKHYL_RS00540;product=endonuclease/exonuclease/phosphatase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	104768	105793	.	+	.	ID=gene-PKHYL_RS00545;Name=PKHYL_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00545;old_locus_tag=PKHYL_01350
NZ_AP019516.1	Protein Homology	CDS	104768	105793	.	+	0	ID=cds-WP_071002593.1;Parent=gene-PKHYL_RS00545;Dbxref=Genbank:WP_071002593.1;Name=WP_071002593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279394.1;locus_tag=PKHYL_RS00545;product=NADP-dependent oxidoreductase;protein_id=WP_071002593.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	106020	106193	.	+	.	ID=gene-PKHYL_RS00550;Name=PKHYL_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00550;old_locus_tag=PKHYL_01360
NZ_AP019516.1	GeneMarkS-2+	CDS	106020	106193	.	+	0	ID=cds-WP_240365725.1;Parent=gene-PKHYL_RS00550;Dbxref=Genbank:WP_240365725.1;Name=WP_240365725.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00550;product=hypothetical protein;protein_id=WP_240365725.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	106210	106347	.	+	.	ID=gene-PKHYL_RS00555;Name=PKHYL_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00555
NZ_AP019516.1	GeneMarkS-2+	CDS	106210	106347	.	+	0	ID=cds-WP_240365726.1;Parent=gene-PKHYL_RS00555;Dbxref=Genbank:WP_240365726.1;Name=WP_240365726.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00555;product=hypothetical protein;protein_id=WP_240365726.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	106396	106842	.	+	.	ID=gene-PKHYL_RS00560;Name=PKHYL_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00560;old_locus_tag=PKHYL_01370
NZ_AP019516.1	Protein Homology	CDS	106396	106842	.	+	0	ID=cds-WP_240365727.1;Parent=gene-PKHYL_RS00560;Dbxref=Genbank:WP_240365727.1;Name=WP_240365727.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024197.2;locus_tag=PKHYL_RS00560;product=EcsC family protein;protein_id=WP_240365727.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	106875	107454	.	-	.	ID=gene-PKHYL_RS00565;Name=PKHYL_RS00565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00565;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	106875	107454	.	-	0	ID=cds-PKHYL_RS00565;Parent=gene-PKHYL_RS00565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279395.1;locus_tag=PKHYL_RS00565;product=alpha-ketoglutarate-dependent dioxygenase AlkB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	107513	108403	.	-	.	ID=gene-PKHYL_RS00570;Name=PKHYL_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00570;old_locus_tag=PKHYL_01390
NZ_AP019516.1	Protein Homology	CDS	107513	108403	.	-	0	ID=cds-WP_071002589.1;Parent=gene-PKHYL_RS00570;Dbxref=Genbank:WP_071002589.1;Name=WP_071002589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442477.1;locus_tag=PKHYL_RS00570;product=alpha/beta hydrolase;protein_id=WP_071002589.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	108441	110354	.	-	.	ID=gene-PKHYL_RS00575;Name=PKHYL_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00575;old_locus_tag=PKHYL_01400
NZ_AP019516.1	Protein Homology	CDS	108441	110354	.	-	0	ID=cds-WP_071002588.1;Parent=gene-PKHYL_RS00575;Dbxref=Genbank:WP_071002588.1;Name=WP_071002588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512465.1;locus_tag=PKHYL_RS00575;product=ABC transporter ATP-binding protein;protein_id=WP_071002588.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	110716	111564	.	+	.	ID=gene-PKHYL_RS00580;Name=PKHYL_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00580;old_locus_tag=PKHYL_01410
NZ_AP019516.1	Protein Homology	CDS	110716	111564	.	+	0	ID=cds-WP_071002587.1;Parent=gene-PKHYL_RS00580;Dbxref=Genbank:WP_071002587.1;Name=WP_071002587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200751.1;locus_tag=PKHYL_RS00580;product=hypothetical protein;protein_id=WP_071002587.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	111742	112632	.	+	.	ID=gene-PKHYL_RS00585;Name=PKHYL_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00585;old_locus_tag=PKHYL_01420
NZ_AP019516.1	Protein Homology	CDS	111742	112632	.	+	0	ID=cds-WP_058023584.1;Parent=gene-PKHYL_RS00585;Dbxref=Genbank:WP_058023584.1;Name=WP_058023584.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442480.1;locus_tag=PKHYL_RS00585;product=fructose bisphosphate aldolase;protein_id=WP_058023584.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	112661	114694	.	-	.	ID=gene-PKHYL_RS00590;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=pseudogene;locus_tag=PKHYL_RS00590;old_locus_tag=PKHYL_01430;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	112661	114694	.	-	0	ID=cds-PKHYL_RS00590;Parent=gene-PKHYL_RS00590;Note=frameshifted;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279399.1;locus_tag=PKHYL_RS00590;product=phosphomethylpyrimidine synthase ThiC;pseudo=true;transl_table=11
NZ_AP019516.1	cmsearch	riboswitch	115034	115189	.	-	.	ID=id-NZ_AP019516.1:115034..115189;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_AP019516.1	RefSeq	gene	115483	116655	.	+	.	ID=gene-PKHYL_RS00595;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=PKHYL_RS00595;old_locus_tag=PKHYL_01460
NZ_AP019516.1	Protein Homology	CDS	115483	116655	.	+	0	ID=cds-WP_071002586.1;Parent=gene-PKHYL_RS00595;Dbxref=Genbank:WP_071002586.1;Name=WP_071002586.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281183.1;locus_tag=PKHYL_RS00595;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_071002586.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	116865	117819	.	+	.	ID=gene-PKHYL_RS00600;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=pseudogene;locus_tag=PKHYL_RS00600;old_locus_tag=PKHYL_01470;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	116865	117819	.	+	0	ID=cds-PKHYL_RS00600;Parent=gene-PKHYL_RS00600;Note=frameshifted;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200767.1;locus_tag=PKHYL_RS00600;product=phosphate ABC transporter permease subunit PstC;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	117910	118785	.	+	.	ID=gene-PKHYL_RS00605;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=PKHYL_RS00605;old_locus_tag=PKHYL_01480
NZ_AP019516.1	Protein Homology	CDS	117910	118785	.	+	0	ID=cds-WP_240366470.1;Parent=gene-PKHYL_RS00605;Dbxref=Genbank:WP_240366470.1;Name=WP_240366470.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007117173.1;locus_tag=PKHYL_RS00605;product=phosphate ABC transporter permease PstA;protein_id=WP_240366470.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	119013	119779	.	+	.	ID=gene-PKHYL_RS00610;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=pseudogene;locus_tag=PKHYL_RS00610;old_locus_tag=PKHYL_01500;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	119013	119779	.	+	0	ID=cds-PKHYL_RS00610;Parent=gene-PKHYL_RS00610;Note=frameshifted;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444347.1;locus_tag=PKHYL_RS00610;product=phosphate ABC transporter ATP-binding protein PstB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	119880	120662	.	+	.	ID=gene-PKHYL_RS00615;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=PKHYL_RS00615;old_locus_tag=PKHYL_01510
NZ_AP019516.1	Protein Homology	CDS	119880	120662	.	+	0	ID=cds-WP_058023580.1;Parent=gene-PKHYL_RS00615;Dbxref=Genbank:WP_058023580.1;Name=WP_058023580.1;Ontology_term=GO:0051049,GO:0003700;gbkey=CDS;gene=phoU;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transport|0051049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961478.1;locus_tag=PKHYL_RS00615;product=phosphate signaling complex protein PhoU;protein_id=WP_058023580.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	120746	120961	.	-	.	ID=gene-PKHYL_RS00620;Name=PKHYL_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00620
NZ_AP019516.1	Protein Homology	CDS	120746	120961	.	-	0	ID=cds-WP_240366471.1;Parent=gene-PKHYL_RS00620;Dbxref=Genbank:WP_240366471.1;Name=WP_240366471.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: protein motif:HMM:NF003817.0;locus_tag=PKHYL_RS00620;product=oxidative damage protection protein;protein_id=WP_240366471.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	120945	121037	.	-	.	ID=gene-PKHYL_RS00625;Name=PKHYL_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00625
NZ_AP019516.1	GeneMarkS-2+	CDS	120945	121037	.	-	0	ID=cds-WP_240365728.1;Parent=gene-PKHYL_RS00625;Dbxref=Genbank:WP_240365728.1;Name=WP_240365728.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00625;product=Fe(2+)-trafficking protein;protein_id=WP_240365728.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	121609	122983	.	-	.	ID=gene-PKHYL_RS00630;Name=argH;gbkey=Gene;gene=argH;gene_biotype=pseudogene;locus_tag=PKHYL_RS00630;old_locus_tag=PKHYL_01540;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	121609	122983	.	-	0	ID=cds-PKHYL_RS00630;Parent=gene-PKHYL_RS00630;Note=frameshifted;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279401.1;locus_tag=PKHYL_RS00630;product=argininosuccinate lyase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	123223	124248	.	+	.	ID=gene-PKHYL_RS00635;Name=PKHYL_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00635;old_locus_tag=PKHYL_01550
NZ_AP019516.1	Protein Homology	CDS	123223	124248	.	+	0	ID=cds-WP_240365729.1;Parent=gene-PKHYL_RS00635;Dbxref=Genbank:WP_240365729.1;Name=WP_240365729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442483.1;locus_tag=PKHYL_RS00635;product=sensor histidine kinase;protein_id=WP_240365729.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	124523	125320	.	+	.	ID=gene-PKHYL_RS00640;Name=PKHYL_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00640;old_locus_tag=PKHYL_01560
NZ_AP019516.1	Protein Homology	CDS	124523	125320	.	+	0	ID=cds-WP_240365730.1;Parent=gene-PKHYL_RS00640;Dbxref=Genbank:WP_240365730.1;Name=WP_240365730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005095238.1;locus_tag=PKHYL_RS00640;product=LytTR family DNA-binding domain-containing protein;protein_id=WP_240365730.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	125466	126509	.	+	.	ID=gene-PKHYL_RS00645;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=PKHYL_RS00645;old_locus_tag=PKHYL_01570
NZ_AP019516.1	Protein Homology	CDS	125466	126509	.	+	0	ID=cds-WP_071002580.1;Parent=gene-PKHYL_RS00645;Dbxref=Genbank:WP_071002580.1;Name=WP_071002580.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442485.1;locus_tag=PKHYL_RS00645;product=hydroxymethylbilane synthase;protein_id=WP_071002580.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	126665	127594	.	+	.	ID=gene-PKHYL_RS00650;Name=PKHYL_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00650;old_locus_tag=PKHYL_01580
NZ_AP019516.1	Protein Homology	CDS	126665	127594	.	+	0	ID=cds-WP_240365731.1;Parent=gene-PKHYL_RS00650;Dbxref=Genbank:WP_240365731.1;Name=WP_240365731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512474.1;locus_tag=PKHYL_RS00650;product=uroporphyrinogen-III synthase;protein_id=WP_240365731.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	127763	128800	.	+	.	ID=gene-PKHYL_RS00655;Name=PKHYL_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00655;old_locus_tag=PKHYL_01590
NZ_AP019516.1	Protein Homology	CDS	127763	128800	.	+	0	ID=cds-WP_186475291.1;Parent=gene-PKHYL_RS00655;Dbxref=Genbank:WP_186475291.1;Name=WP_186475291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512475.1;locus_tag=PKHYL_RS00655;product=hypothetical protein;protein_id=WP_186475291.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	128863	129342	.	+	.	ID=gene-PKHYL_RS00660;Name=PKHYL_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00660;old_locus_tag=PKHYL_01600
NZ_AP019516.1	Protein Homology	CDS	128863	129342	.	+	0	ID=cds-WP_156771010.1;Parent=gene-PKHYL_RS00660;Dbxref=Genbank:WP_156771010.1;Name=WP_156771010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961473.1;locus_tag=PKHYL_RS00660;product=thioesterase family protein;protein_id=WP_156771010.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	129474	130587	.	-	.	ID=gene-PKHYL_RS00665;Name=ribBA;gbkey=Gene;gene=ribBA;gene_biotype=pseudogene;locus_tag=PKHYL_RS00665;old_locus_tag=PKHYL_01610;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	129474	130587	.	-	0	ID=cds-PKHYL_RS00665;Parent=gene-PKHYL_RS00665;Note=frameshifted;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;gene=ribBA;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005108349.1;locus_tag=PKHYL_RS00665;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	130898	132185	.	-	.	ID=gene-PKHYL_RS00670;Name=PKHYL_RS00670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00670;old_locus_tag=PKHYL_01630;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	130898	132185	.	-	0	ID=cds-PKHYL_RS00670;Parent=gene-PKHYL_RS00670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279407.1;locus_tag=PKHYL_RS00670;product=replication-associated recombination protein A;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	132601	133133	.	+	.	ID=gene-PKHYL_RS00675;Name=PKHYL_RS00675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00675;old_locus_tag=PKHYL_01640;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	132601	133133	.	+	0	ID=cds-PKHYL_RS00675;Parent=gene-PKHYL_RS00675;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200789.1;locus_tag=PKHYL_RS00675;product=type IV secretion protein Rhs;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	133218	133970	.	+	.	ID=gene-PKHYL_RS00680;Name=PKHYL_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00680;old_locus_tag=PKHYL_01650
NZ_AP019516.1	GeneMarkS-2+	CDS	133218	133970	.	+	0	ID=cds-WP_240365732.1;Parent=gene-PKHYL_RS00680;Dbxref=Genbank:WP_240365732.1;Name=WP_240365732.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00680;product=hypothetical protein;protein_id=WP_240365732.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	133982	134116	.	+	.	ID=gene-PKHYL_RS17000;Name=PKHYL_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17000;old_locus_tag=PKHYL_01660
NZ_AP019516.1	GeneMarkS-2+	CDS	133982	134116	.	+	0	ID=cds-WP_269778210.1;Parent=gene-PKHYL_RS17000;Dbxref=Genbank:WP_269778210.1;Name=WP_269778210.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17000;product=hypothetical protein;protein_id=WP_269778210.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	134251	135531	.	-	.	ID=gene-PKHYL_RS00685;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=PKHYL_RS00685;old_locus_tag=PKHYL_01670
NZ_AP019516.1	Protein Homology	CDS	134251	135531	.	-	0	ID=cds-WP_071002573.1;Parent=gene-PKHYL_RS00685;Dbxref=Genbank:WP_071002573.1;Name=WP_071002573.1;Ontology_term=GO:0006099,GO:0004108;gbkey=CDS;gene=gltA;go_function=citrate (Si)-synthase activity|0004108||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200792.1;locus_tag=PKHYL_RS00685;product=citrate synthase;protein_id=WP_071002573.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	136561	136947	.	+	.	ID=gene-PKHYL_RS00690;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=PKHYL_RS00690;old_locus_tag=PKHYL_01680
NZ_AP019516.1	Protein Homology	CDS	136561	136947	.	+	0	ID=cds-WP_083328899.1;Parent=gene-PKHYL_RS00690;Dbxref=Genbank:WP_083328899.1;Name=WP_083328899.1;Ontology_term=GO:0006099,GO:0000104,GO:0045282;gbkey=CDS;gene=sdhC;go_component=plasma membrane succinate dehydrogenase complex|0045282||IEA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017401997.1;locus_tag=PKHYL_RS00690;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=WP_083328899.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	136968	137354	.	+	.	ID=gene-PKHYL_RS00695;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=PKHYL_RS00695;old_locus_tag=PKHYL_01690
NZ_AP019516.1	Protein Homology	CDS	136968	137354	.	+	0	ID=cds-WP_227511562.1;Parent=gene-PKHYL_RS00695;Dbxref=Genbank:WP_227511562.1;Name=WP_227511562.1;Ontology_term=GO:0006099,GO:0000104,GO:0045282;gbkey=CDS;gene=sdhD;go_component=plasma membrane succinate dehydrogenase complex|0045282||IEA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279412.1;locus_tag=PKHYL_RS00695;product=succinate dehydrogenase%2C hydrophobic membrane anchor protein;protein_id=WP_227511562.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	137709	139559	.	+	.	ID=gene-PKHYL_RS00700;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=pseudogene;locus_tag=PKHYL_RS00700;old_locus_tag=PKHYL_01720;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	137709	139559	.	+	0	ID=cds-PKHYL_RS00700;Parent=gene-PKHYL_RS00700;Note=frameshifted;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672358.1;locus_tag=PKHYL_RS00700;product=succinate dehydrogenase flavoprotein subunit;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	139766	140474	.	+	.	ID=gene-PKHYL_RS00705;Name=PKHYL_RS00705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00705;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	139766	140474	.	+	0	ID=cds-PKHYL_RS00705;Parent=gene-PKHYL_RS00705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016651020.1;locus_tag=PKHYL_RS00705;product=succinate dehydrogenase iron-sulfur subunit;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	141411	144295	.	+	.	ID=gene-PKHYL_RS00710;Name=PKHYL_RS00710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00710;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	141411	144295	.	+	0	ID=cds-PKHYL_RS00710;Parent=gene-PKHYL_RS00710;Note=frameshifted;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200797.1;locus_tag=PKHYL_RS00710;product=2-oxoglutarate dehydrogenase E1 component;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	144449	145684	.	+	.	ID=gene-PKHYL_RS00715;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=PKHYL_RS00715;old_locus_tag=PKHYL_01780
NZ_AP019516.1	Protein Homology	CDS	144449	145684	.	+	0	ID=cds-WP_071002569.1;Parent=gene-PKHYL_RS00715;Dbxref=Genbank:WP_071002569.1;Name=WP_071002569.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003667308.1;locus_tag=PKHYL_RS00715;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_071002569.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	145942	147397	.	+	.	ID=gene-PKHYL_RS00720;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=pseudogene;locus_tag=PKHYL_RS00720;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	145942	147397	.	+	0	ID=cds-PKHYL_RS00720;Parent=gene-PKHYL_RS00720;Note=frameshifted;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200808.1;locus_tag=PKHYL_RS00720;product=dihydrolipoyl dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	147555	148756	.	+	.	ID=gene-PKHYL_RS00725;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=pseudogene;locus_tag=PKHYL_RS00725;old_locus_tag=PKHYL_01810;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	147555	148756	.	+	0	ID=cds-PKHYL_RS00725;Parent=gene-PKHYL_RS00725;Note=frameshifted;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004753545.1;locus_tag=PKHYL_RS00725;product=ADP-forming succinate--CoA ligase subunit beta;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	148821	149696	.	+	.	ID=gene-PKHYL_RS00730;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=PKHYL_RS00730;old_locus_tag=PKHYL_01830
NZ_AP019516.1	Protein Homology	CDS	148821	149696	.	+	0	ID=cds-WP_058023974.1;Parent=gene-PKHYL_RS00730;Dbxref=Genbank:WP_058023974.1;Name=WP_058023974.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672364.1;locus_tag=PKHYL_RS00730;product=succinate--CoA ligase subunit alpha;protein_id=WP_058023974.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	150032	150904	.	+	.	ID=gene-PKHYL_RS00735;Name=PKHYL_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00735;old_locus_tag=PKHYL_01840
NZ_AP019516.1	Protein Homology	CDS	150032	150904	.	+	0	ID=cds-WP_071002567.1;Parent=gene-PKHYL_RS00735;Dbxref=Genbank:WP_071002567.1;Name=WP_071002567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442499.1;locus_tag=PKHYL_RS00735;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_071002567.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	150907	152582	.	+	.	ID=gene-PKHYL_RS00740;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=pseudogene;locus_tag=PKHYL_RS00740;old_locus_tag=PKHYL_01850;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	150907	152582	.	+	0	ID=cds-PKHYL_RS00740;Parent=gene-PKHYL_RS00740;Note=frameshifted;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442500.1;locus_tag=PKHYL_RS00740;product=glucose-6-phosphate isomerase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	152690	154024	.	+	.	ID=gene-PKHYL_RS00745;Name=PKHYL_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00745;old_locus_tag=PKHYL_01860
NZ_AP019516.1	Protein Homology	CDS	152690	154024	.	+	0	ID=cds-WP_240365733.1;Parent=gene-PKHYL_RS00745;Dbxref=Genbank:WP_240365733.1;Name=WP_240365733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279423.1;locus_tag=PKHYL_RS00745;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=WP_240365733.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	154090	155577	.	-	.	ID=gene-PKHYL_RS00750;Name=PKHYL_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00750;old_locus_tag=PKHYL_01870
NZ_AP019516.1	Protein Homology	CDS	154090	155577	.	-	0	ID=cds-WP_240365734.1;Parent=gene-PKHYL_RS00750;Dbxref=Genbank:WP_240365734.1;Name=WP_240365734.1;Note=capsular polysaccharide biosynthesis protein%3B catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200849.1;locus_tag=PKHYL_RS00750;product=phosphomannomutase CpsG;protein_id=WP_240365734.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	155822	156688	.	+	.	ID=gene-PKHYL_RS00755;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=PKHYL_RS00755;old_locus_tag=PKHYL_01880
NZ_AP019516.1	Protein Homology	CDS	155822	156688	.	+	0	ID=cds-WP_223334353.1;Parent=gene-PKHYL_RS00755;Dbxref=Genbank:WP_223334353.1;Name=WP_223334353.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200851.1;locus_tag=PKHYL_RS00755;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_223334353.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	156765	157064	.	+	.	ID=gene-PKHYL_RS00760;Name=PKHYL_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00760;old_locus_tag=PKHYL_01890
NZ_AP019516.1	Protein Homology	CDS	156765	157064	.	+	0	ID=cds-WP_240365735.1;Parent=gene-PKHYL_RS00760;Dbxref=Genbank:WP_240365735.1;Name=WP_240365735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279426.1;locus_tag=PKHYL_RS00760;product=ComEA family DNA-binding protein;protein_id=WP_240365735.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	157231	159376	.	+	.	ID=gene-PKHYL_RS00765;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=pseudogene;locus_tag=PKHYL_RS00765;old_locus_tag=PKHYL_01910;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	157231	159376	.	+	0	ID=cds-PKHYL_RS00765;Parent=gene-PKHYL_RS00765;Note=frameshifted;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200853.1;locus_tag=PKHYL_RS00765;product=polynucleotide adenylyltransferase PcnB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	159390	159898	.	+	.	ID=gene-PKHYL_RS00770;Name=folK;gbkey=Gene;gene=folK;gene_biotype=pseudogene;locus_tag=PKHYL_RS00770;old_locus_tag=PKHYL_01920;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	159390	159898	.	+	0	ID=cds-PKHYL_RS00770;Parent=gene-PKHYL_RS00770;Note=frameshifted;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279428.1;locus_tag=PKHYL_RS00770;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	160017	160817	.	+	.	ID=gene-PKHYL_RS00775;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=PKHYL_RS00775;old_locus_tag=PKHYL_01930
NZ_AP019516.1	Protein Homology	CDS	160017	160817	.	+	0	ID=cds-WP_071002559.1;Parent=gene-PKHYL_RS00775;Dbxref=Genbank:WP_071002559.1;Name=WP_071002559.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200855.1;locus_tag=PKHYL_RS00775;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_071002559.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	160868	161770	.	+	.	ID=gene-PKHYL_RS00780;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=PKHYL_RS00780;old_locus_tag=PKHYL_01940
NZ_AP019516.1	Protein Homology	CDS	160868	161770	.	+	0	ID=cds-WP_083328898.1;Parent=gene-PKHYL_RS00780;Dbxref=Genbank:WP_083328898.1;Name=WP_083328898.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279430.1;locus_tag=PKHYL_RS00780;product=pantoate--beta-alanine ligase;protein_id=WP_083328898.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	161821	162801	.	+	.	ID=gene-PKHYL_RS00785;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=PKHYL_RS00785;old_locus_tag=PKHYL_01950
NZ_AP019516.1	Protein Homology	CDS	161821	162801	.	+	0	ID=cds-WP_093069802.1;Parent=gene-PKHYL_RS00785;Dbxref=Genbank:WP_093069802.1;Name=WP_093069802.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673118.1;locus_tag=PKHYL_RS00785;product=RNase adapter RapZ;protein_id=WP_093069802.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	162850	163362	.	+	.	ID=gene-PKHYL_RS00790;Name=PKHYL_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00790;old_locus_tag=PKHYL_01960
NZ_AP019516.1	Protein Homology	CDS	162850	163362	.	+	0	ID=cds-WP_071002557.1;Parent=gene-PKHYL_RS00790;Dbxref=Genbank:WP_071002557.1;Name=WP_071002557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279432.1;locus_tag=PKHYL_RS00790;product=DUF615 domain-containing protein;protein_id=WP_071002557.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	163462	164082	.	-	.	ID=gene-PKHYL_RS00795;Name=PKHYL_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00795;old_locus_tag=PKHYL_01970
NZ_AP019516.1	Protein Homology	CDS	163462	164082	.	-	0	ID=cds-WP_071002556.1;Parent=gene-PKHYL_RS00795;Dbxref=Genbank:WP_071002556.1;Name=WP_071002556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279433.1;locus_tag=PKHYL_RS00795;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_071002556.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	164583	165431	.	+	.	ID=gene-PKHYL_RS00800;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=PKHYL_RS00800;old_locus_tag=PKHYL_01980
NZ_AP019516.1	Protein Homology	CDS	164583	165431	.	+	0	ID=cds-WP_071002555.1;Parent=gene-PKHYL_RS00800;Dbxref=Genbank:WP_071002555.1;Name=WP_071002555.1;Ontology_term=GO:0006744,GO:0008689;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinone-9 3-O-methyltransferase activity|0008689||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200863.1;locus_tag=PKHYL_RS00800;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_071002555.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	165515	166225	.	+	.	ID=gene-PKHYL_RS00805;Name=PKHYL_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00805;old_locus_tag=PKHYL_01990
NZ_AP019516.1	Protein Homology	CDS	165515	166225	.	+	0	ID=cds-WP_071002554.1;Parent=gene-PKHYL_RS00805;Dbxref=Genbank:WP_071002554.1;Name=WP_071002554.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512506.1;locus_tag=PKHYL_RS00805;product=HAD-IA family hydrolase;protein_id=WP_071002554.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	166324	167161	.	+	.	ID=gene-PKHYL_RS00810;Name=PKHYL_RS00810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00810;old_locus_tag=PKHYL_02000;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	166324	167161	.	+	0	ID=cds-PKHYL_RS00810;Parent=gene-PKHYL_RS00810;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442511.1;locus_tag=PKHYL_RS00810;product=YciK family oxidoreductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	167312	167578	.	+	.	ID=gene-PKHYL_RS00815;Name=PKHYL_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00815;old_locus_tag=PKHYL_02010
NZ_AP019516.1	Protein Homology	CDS	167312	167578	.	+	0	ID=cds-WP_071002552.1;Parent=gene-PKHYL_RS00815;Dbxref=Genbank:WP_071002552.1;Name=WP_071002552.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279437.1;locus_tag=PKHYL_RS00815;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_071002552.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	167692	168846	.	-	.	ID=gene-PKHYL_RS00820;Name=PKHYL_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00820;old_locus_tag=PKHYL_02020
NZ_AP019516.1	Protein Homology	CDS	167692	168846	.	-	0	ID=cds-WP_240365736.1;Parent=gene-PKHYL_RS00820;Dbxref=Genbank:WP_240365736.1;Name=WP_240365736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672787.1;locus_tag=PKHYL_RS00820;product=GTP-binding protein;protein_id=WP_240365736.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	168926	169684	.	-	.	ID=gene-PKHYL_RS00825;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=PKHYL_RS00825;old_locus_tag=PKHYL_02030
NZ_AP019516.1	Protein Homology	CDS	168926	169684	.	-	0	ID=cds-WP_071002551.1;Parent=gene-PKHYL_RS00825;Dbxref=Genbank:WP_071002551.1;Name=WP_071002551.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF007005.1;locus_tag=PKHYL_RS00825;product=two-component system response regulator OmpR;protein_id=WP_071002551.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	170060	172604	.	+	.	ID=gene-PKHYL_RS00830;Name=PKHYL_RS00830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00830;old_locus_tag=PKHYL_02050;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	170060	172604	.	+	0	ID=cds-PKHYL_RS00830;Parent=gene-PKHYL_RS00830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442513.1;locus_tag=PKHYL_RS00830;product=Tex family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	172720	173268	.	-	.	ID=gene-PKHYL_RS00835;Name=PKHYL_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00835;old_locus_tag=PKHYL_02060
NZ_AP019516.1	GeneMarkS-2+	CDS	172720	173268	.	-	0	ID=cds-WP_240365737.1;Parent=gene-PKHYL_RS00835;Dbxref=Genbank:WP_240365737.1;Name=WP_240365737.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00835;product=hypothetical protein;protein_id=WP_240365737.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	174034	175320	.	-	.	ID=gene-PKHYL_RS00840;Name=PKHYL_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00840;old_locus_tag=PKHYL_02070
NZ_AP019516.1	Protein Homology	CDS	174034	175320	.	-	0	ID=cds-WP_240365738.1;Parent=gene-PKHYL_RS00840;Dbxref=Genbank:WP_240365738.1;Name=WP_240365738.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200880.1;locus_tag=PKHYL_RS00840;product=saccharopine dehydrogenase NADP-binding domain-containing protein;protein_id=WP_240365738.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	175747	175902	.	+	.	ID=gene-PKHYL_RS00845;Name=PKHYL_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00845;old_locus_tag=PKHYL_02080
NZ_AP019516.1	Protein Homology	CDS	175747	175902	.	+	0	ID=cds-WP_021814049.1;Parent=gene-PKHYL_RS00845;Dbxref=Genbank:WP_021814049.1;Name=WP_021814049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512513.1;locus_tag=PKHYL_RS00845;product=DUF1328 domain-containing protein;protein_id=WP_021814049.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	176010	176303	.	-	.	ID=gene-PKHYL_RS00850;Name=PKHYL_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00850;old_locus_tag=PKHYL_02090
NZ_AP019516.1	Protein Homology	CDS	176010	176303	.	-	0	ID=cds-WP_071002546.1;Parent=gene-PKHYL_RS00850;Dbxref=Genbank:WP_071002546.1;Name=WP_071002546.1;Ontology_term=GO:0006729,GO:0008124;gbkey=CDS;go_function=4-alpha-hydroxytetrahydrobiopterin dehydratase activity|0008124||IEA;go_process=tetrahydrobiopterin biosynthetic process|0006729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279444.1;locus_tag=PKHYL_RS00850;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_071002546.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	176413	176705	.	-	.	ID=gene-PKHYL_RS00855;Name=PKHYL_RS00855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00855;old_locus_tag=PKHYL_02100;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	176413	176705	.	-	0	ID=cds-PKHYL_RS00855;Parent=gene-PKHYL_RS00855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512515.1;locus_tag=PKHYL_RS00855;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	176930	177604	.	-	.	ID=gene-PKHYL_RS00860;Name=PKHYL_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00860;old_locus_tag=PKHYL_02110
NZ_AP019516.1	Protein Homology	CDS	176930	177604	.	-	0	ID=cds-WP_240365739.1;Parent=gene-PKHYL_RS00860;Dbxref=Genbank:WP_240365739.1;Name=WP_240365739.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: protein motif:HMM:NF012699.2;locus_tag=PKHYL_RS00860;product=fatty acid desaturase;protein_id=WP_240365739.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	177582	178298	.	-	.	ID=gene-PKHYL_RS00865;Name=PKHYL_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00865;old_locus_tag=PKHYL_02120
NZ_AP019516.1	GeneMarkS-2+	CDS	177582	178298	.	-	0	ID=cds-WP_240365740.1;Parent=gene-PKHYL_RS00865;Dbxref=Genbank:WP_240365740.1;Name=WP_240365740.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00865;product=hypothetical protein;protein_id=WP_240365740.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	178459	179667	.	-	.	ID=gene-PKHYL_RS00870;Name=PKHYL_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00870;old_locus_tag=PKHYL_02130
NZ_AP019516.1	Protein Homology	CDS	178459	179667	.	-	0	ID=cds-WP_240365741.1;Parent=gene-PKHYL_RS00870;Dbxref=Genbank:WP_240365741.1;Name=WP_240365741.1;Ontology_term=GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442519.1;locus_tag=PKHYL_RS00870;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_240365741.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	180111	181772	.	+	.	ID=gene-PKHYL_RS00875;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=pseudogene;locus_tag=PKHYL_RS00875;old_locus_tag=PKHYL_02140;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	180111	181772	.	+	0	ID=cds-PKHYL_RS00875;Parent=gene-PKHYL_RS00875;Note=frameshifted;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200887.1;locus_tag=PKHYL_RS00875;product=energy-dependent translational throttle protein EttA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	181868	183821	.	-	.	ID=gene-PKHYL_RS00880;Name=plsB;end_range=183821,.;gbkey=Gene;gene=plsB;gene_biotype=pseudogene;locus_tag=PKHYL_RS00880;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	181868	183821	.	-	0	ID=cds-PKHYL_RS00880;Parent=gene-PKHYL_RS00880;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008654,GO:0004366;end_range=183821,.;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959460.1;locus_tag=PKHYL_RS00880;partial=true;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	184289	184546	.	-	.	ID=gene-PKHYL_RS00885;Name=PKHYL_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00885;old_locus_tag=PKHYL_02180
NZ_AP019516.1	GeneMarkS-2+	CDS	184289	184546	.	-	0	ID=cds-WP_240365742.1;Parent=gene-PKHYL_RS00885;Dbxref=Genbank:WP_240365742.1;Name=WP_240365742.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00885;product=hypothetical protein;protein_id=WP_240365742.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	184518	184826	.	-	.	ID=gene-PKHYL_RS00890;Name=PKHYL_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00890;old_locus_tag=PKHYL_02190
NZ_AP019516.1	GeneMarkS-2+	CDS	184518	184826	.	-	0	ID=cds-WP_240365743.1;Parent=gene-PKHYL_RS00890;Dbxref=Genbank:WP_240365743.1;Name=WP_240365743.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00890;product=hypothetical protein;protein_id=WP_240365743.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	185052	185541	.	+	.	ID=gene-PKHYL_RS00895;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=pseudogene;locus_tag=PKHYL_RS00895;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	185052	185541	.	+	0	ID=cds-PKHYL_RS00895;Parent=gene-PKHYL_RS00895;Note=frameshifted;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442522.1;locus_tag=PKHYL_RS00895;product=Cys-tRNA(Pro) deacylase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	185631	186005	.	+	.	ID=gene-PKHYL_RS00900;Name=PKHYL_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00900;old_locus_tag=PKHYL_02220
NZ_AP019516.1	Protein Homology	CDS	185631	186005	.	+	0	ID=cds-WP_240365744.1;Parent=gene-PKHYL_RS00900;Dbxref=Genbank:WP_240365744.1;Name=WP_240365744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512521.1;locus_tag=PKHYL_RS00900;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_240365744.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	186091	186279	.	-	.	ID=gene-PKHYL_RS00905;Name=PKHYL_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00905;old_locus_tag=PKHYL_02230
NZ_AP019516.1	GeneMarkS-2+	CDS	186091	186279	.	-	0	ID=cds-WP_240365745.1;Parent=gene-PKHYL_RS00905;Dbxref=Genbank:WP_240365745.1;Name=WP_240365745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00905;product=hypothetical protein;protein_id=WP_240365745.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	186346	186579	.	+	.	ID=gene-PKHYL_RS00910;Name=PKHYL_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00910
NZ_AP019516.1	GeneMarkS-2+	CDS	186346	186579	.	+	0	ID=cds-WP_240365746.1;Parent=gene-PKHYL_RS00910;Dbxref=Genbank:WP_240365746.1;Name=WP_240365746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00910;product=hypothetical protein;protein_id=WP_240365746.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	186681	188501	.	-	.	ID=gene-PKHYL_RS00915;Name=PKHYL_RS00915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS00915;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	186681	188501	.	-	0	ID=cds-PKHYL_RS00915;Parent=gene-PKHYL_RS00915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656236.1;locus_tag=PKHYL_RS00915;product=acyl-CoA dehydrogenase C-terminal domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	189000	190124	.	+	.	ID=gene-PKHYL_RS00920;Name=PKHYL_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00920;old_locus_tag=PKHYL_02270
NZ_AP019516.1	Protein Homology	CDS	189000	190124	.	+	0	ID=cds-WP_240365747.1;Parent=gene-PKHYL_RS00920;Dbxref=Genbank:WP_240365747.1;Name=WP_240365747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200903.1;locus_tag=PKHYL_RS00920;product=FUSC family protein;protein_id=WP_240365747.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	190161	191021	.	-	.	ID=gene-PKHYL_RS00925;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=pseudogene;locus_tag=PKHYL_RS00925;old_locus_tag=PKHYL_02280;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	190161	191021	.	-	0	ID=cds-PKHYL_RS00925;Parent=gene-PKHYL_RS00925;Note=frameshifted;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512524.1;locus_tag=PKHYL_RS00925;product=shikimate dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	191387	192073	.	+	.	ID=gene-PKHYL_RS00930;Name=PKHYL_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00930;old_locus_tag=PKHYL_02290
NZ_AP019516.1	Protein Homology	CDS	191387	192073	.	+	0	ID=cds-WP_228724646.1;Parent=gene-PKHYL_RS00930;Dbxref=Genbank:WP_228724646.1;Name=WP_228724646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200905.1;locus_tag=PKHYL_RS00930;product=hypothetical protein;protein_id=WP_228724646.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	192086	193063	.	+	.	ID=gene-PKHYL_RS00935;Name=PKHYL_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00935;old_locus_tag=PKHYL_02300
NZ_AP019516.1	Protein Homology	CDS	192086	193063	.	+	0	ID=cds-WP_240365748.1;Parent=gene-PKHYL_RS00935;Dbxref=Genbank:WP_240365748.1;Name=WP_240365748.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512526.1;locus_tag=PKHYL_RS00935;product=aminotransferase class IV;protein_id=WP_240365748.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	193103	193891	.	-	.	ID=gene-PKHYL_RS00940;Name=PKHYL_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00940;old_locus_tag=PKHYL_02310
NZ_AP019516.1	Protein Homology	CDS	193103	193891	.	-	0	ID=cds-WP_240365749.1;Parent=gene-PKHYL_RS00940;Dbxref=Genbank:WP_240365749.1;Name=WP_240365749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659193.1;locus_tag=PKHYL_RS00940;product=site-specific DNA-methyltransferase;protein_id=WP_240365749.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	193894	194142	.	-	.	ID=gene-PKHYL_RS00945;Name=PKHYL_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00945;old_locus_tag=PKHYL_02320
NZ_AP019516.1	GeneMarkS-2+	CDS	193894	194142	.	-	0	ID=cds-WP_240365750.1;Parent=gene-PKHYL_RS00945;Dbxref=Genbank:WP_240365750.1;Name=WP_240365750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00945;product=hypothetical protein;protein_id=WP_240365750.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	194237	195304	.	+	.	ID=gene-PKHYL_RS00950;Name=PKHYL_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00950;old_locus_tag=PKHYL_02330
NZ_AP019516.1	Protein Homology	CDS	194237	195304	.	+	0	ID=cds-WP_240365751.1;Parent=gene-PKHYL_RS00950;Dbxref=Genbank:WP_240365751.1;Name=WP_240365751.1;Ontology_term=GO:0006306,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:TIGR00571.1;locus_tag=PKHYL_RS00950;product=Dam family site-specific DNA-(adenine-N6)-methyltransferase;protein_id=WP_240365751.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	195307	195591	.	+	.	ID=gene-PKHYL_RS00955;Name=PKHYL_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00955;old_locus_tag=PKHYL_02340
NZ_AP019516.1	GeneMarkS-2+	CDS	195307	195591	.	+	0	ID=cds-WP_240365752.1;Parent=gene-PKHYL_RS00955;Dbxref=Genbank:WP_240365752.1;Name=WP_240365752.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00955;product=hypothetical protein;protein_id=WP_240365752.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	195619	196458	.	+	.	ID=gene-PKHYL_RS00960;Name=PKHYL_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00960;old_locus_tag=PKHYL_02350
NZ_AP019516.1	GeneMarkS-2+	CDS	195619	196458	.	+	0	ID=cds-WP_240365753.1;Parent=gene-PKHYL_RS00960;Dbxref=Genbank:WP_240365753.1;Name=WP_240365753.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00960;product=hypothetical protein;protein_id=WP_240365753.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	196727	198005	.	+	.	ID=gene-PKHYL_RS00965;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=pseudogene;locus_tag=PKHYL_RS00965;old_locus_tag=PKHYL_02370;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	196727	198005	.	+	0	ID=cds-PKHYL_RS00965;Parent=gene-PKHYL_RS00965;Note=frameshifted;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442530.1;locus_tag=PKHYL_RS00965;product=endolytic transglycosylase MltG;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	198191	198823	.	+	.	ID=gene-PKHYL_RS00970;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=pseudogene;locus_tag=PKHYL_RS00970;old_locus_tag=PKHYL_02390;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	198191	198823	.	+	0	ID=cds-PKHYL_RS00970;Parent=gene-PKHYL_RS00970;Note=frameshifted;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442531.1;locus_tag=PKHYL_RS00970;product=dTMP kinase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	198938	199879	.	-	.	ID=gene-PKHYL_RS00975;Name=PKHYL_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00975;old_locus_tag=PKHYL_02400
NZ_AP019516.1	Protein Homology	CDS	198938	199879	.	-	0	ID=cds-WP_240365754.1;Parent=gene-PKHYL_RS00975;Dbxref=Genbank:WP_240365754.1;Name=WP_240365754.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=PKHYL_RS00975;product=IS3 family transposase;protein_id=WP_240365754.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	199896	200285	.	-	.	ID=gene-PKHYL_RS00980;Name=PKHYL_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00980;old_locus_tag=PKHYL_02410
NZ_AP019516.1	Protein Homology	CDS	199896	200285	.	-	0	ID=cds-WP_240365635.1-2;Parent=gene-PKHYL_RS00980;Dbxref=Genbank:WP_240365635.1;Name=WP_240365635.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024908.2;locus_tag=PKHYL_RS00980;product=transposase;protein_id=WP_240365635.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	200404	200541	.	-	.	ID=gene-PKHYL_RS00985;Name=PKHYL_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00985;old_locus_tag=PKHYL_02420
NZ_AP019516.1	GeneMarkS-2+	CDS	200404	200541	.	-	0	ID=cds-WP_240365755.1;Parent=gene-PKHYL_RS00985;Dbxref=Genbank:WP_240365755.1;Name=WP_240365755.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00985;product=hypothetical protein;protein_id=WP_240365755.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	200519	200953	.	-	.	ID=gene-PKHYL_RS00990;Name=PKHYL_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00990;old_locus_tag=PKHYL_02430
NZ_AP019516.1	GeneMarkS-2+	CDS	200519	200953	.	-	0	ID=cds-WP_240365756.1;Parent=gene-PKHYL_RS00990;Dbxref=Genbank:WP_240365756.1;Name=WP_240365756.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS00990;product=hypothetical protein;protein_id=WP_240365756.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	200923	202713	.	-	.	ID=gene-PKHYL_RS00995;Name=PKHYL_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS00995;old_locus_tag=PKHYL_02440
NZ_AP019516.1	Protein Homology	CDS	200923	202713	.	-	0	ID=cds-WP_240365757.1;Parent=gene-PKHYL_RS00995;Dbxref=Genbank:WP_240365757.1;Name=WP_240365757.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013188.2;locus_tag=PKHYL_RS00995;product=sodium:proton antiporter;protein_id=WP_240365757.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	203694	205148	.	+	.	ID=gene-PKHYL_RS01000;Name=PKHYL_RS01000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01000;old_locus_tag=PKHYL_02460;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	203694	205148	.	+	0	ID=cds-PKHYL_RS01000;Parent=gene-PKHYL_RS01000;Note=frameshifted;Ontology_term=GO:0006508,GO:0006950,GO:0004252,GO:0005515,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279460.1;locus_tag=PKHYL_RS01000;product=Do family serine endopeptidase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	205802	206707	.	+	.	ID=gene-PKHYL_RS01005;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=PKHYL_RS01005;old_locus_tag=PKHYL_02470
NZ_AP019516.1	Protein Homology	CDS	205802	206707	.	+	0	ID=cds-WP_071002526.1;Parent=gene-PKHYL_RS01005;Dbxref=Genbank:WP_071002526.1;Name=WP_071002526.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196115.1;locus_tag=PKHYL_RS01005;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_071002526.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	206830	207144	.	+	.	ID=gene-PKHYL_RS01010;Name=PKHYL_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01010;old_locus_tag=PKHYL_02480
NZ_AP019516.1	Protein Homology	CDS	206830	207144	.	+	0	ID=cds-WP_227517122.1;Parent=gene-PKHYL_RS01010;Dbxref=Genbank:WP_227517122.1;Name=WP_227517122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442535.1;locus_tag=PKHYL_RS01010;product=hypothetical protein;protein_id=WP_227517122.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	207354	208067	.	+	.	ID=gene-PKHYL_RS01015;Name=PKHYL_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01015;old_locus_tag=PKHYL_02490
NZ_AP019516.1	Protein Homology	CDS	207354	208067	.	+	0	ID=cds-WP_071002524.1;Parent=gene-PKHYL_RS01015;Dbxref=Genbank:WP_071002524.1;Name=WP_071002524.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004781395.1;locus_tag=PKHYL_RS01015;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_071002524.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	208254	208787	.	+	.	ID=gene-PKHYL_RS01020;Name=PKHYL_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01020;old_locus_tag=PKHYL_02500
NZ_AP019516.1	GeneMarkS-2+	CDS	208254	208787	.	+	0	ID=cds-WP_071002523.1;Parent=gene-PKHYL_RS01020;Dbxref=Genbank:WP_071002523.1;Name=WP_071002523.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01020;product=hypothetical protein;protein_id=WP_071002523.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	209073	209704	.	+	.	ID=gene-PKHYL_RS01025;Name=PKHYL_RS01025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01025;old_locus_tag=PKHYL_02510;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	209073	209704	.	+	0	ID=cds-PKHYL_RS01025;Parent=gene-PKHYL_RS01025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196108.1;locus_tag=PKHYL_RS01025;product=DNA-3-methyladenine glycosylase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	209742	210052	.	+	.	ID=gene-PKHYL_RS01030;Name=PKHYL_RS01030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01030;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	209742	210052	.	+	0	ID=cds-PKHYL_RS01030;Parent=gene-PKHYL_RS01030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512537.1;locus_tag=PKHYL_RS01030;product=NGG1p interacting factor NIF3;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	210311	210598	.	-	.	ID=gene-PKHYL_RS01035;Name=PKHYL_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01035;old_locus_tag=PKHYL_02530
NZ_AP019516.1	GeneMarkS-2+	CDS	210311	210598	.	-	0	ID=cds-WP_240365758.1;Parent=gene-PKHYL_RS01035;Dbxref=Genbank:WP_240365758.1;Name=WP_240365758.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01035;product=hypothetical protein;protein_id=WP_240365758.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	210913	211368	.	-	.	ID=gene-PKHYL_RS01040;Name=PKHYL_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01040;old_locus_tag=PKHYL_02550
NZ_AP019516.1	GeneMarkS-2+	CDS	210913	211368	.	-	0	ID=cds-WP_240365759.1;Parent=gene-PKHYL_RS01040;Dbxref=Genbank:WP_240365759.1;Name=WP_240365759.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01040;product=hypothetical protein;protein_id=WP_240365759.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	212120	212323	.	-	.	ID=gene-PKHYL_RS01045;Name=PKHYL_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01045;old_locus_tag=PKHYL_02560
NZ_AP019516.1	Protein Homology	CDS	212120	212323	.	-	0	ID=cds-WP_240365760.1;Parent=gene-PKHYL_RS01045;Dbxref=Genbank:WP_240365760.1;Name=WP_240365760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512540.1;locus_tag=PKHYL_RS01045;product=CsbD family protein;protein_id=WP_240365760.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	213018	213164	.	-	.	ID=gene-PKHYL_RS01050;Name=PKHYL_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01050
NZ_AP019516.1	GeneMarkS-2+	CDS	213018	213164	.	-	0	ID=cds-WP_240365761.1;Parent=gene-PKHYL_RS01050;Dbxref=Genbank:WP_240365761.1;Name=WP_240365761.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01050;product=hypothetical protein;protein_id=WP_240365761.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	213596	213844	.	+	.	ID=gene-PKHYL_RS01055;Name=PKHYL_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01055;old_locus_tag=PKHYL_02570
NZ_AP019516.1	GeneMarkS-2+	CDS	213596	213844	.	+	0	ID=cds-WP_240365762.1;Parent=gene-PKHYL_RS01055;Dbxref=Genbank:WP_240365762.1;Name=WP_240365762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01055;product=hypothetical protein;protein_id=WP_240365762.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	213897	214103	.	+	.	ID=gene-PKHYL_RS01060;Name=PKHYL_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01060;old_locus_tag=PKHYL_02580
NZ_AP019516.1	GeneMarkS-2+	CDS	213897	214103	.	+	0	ID=cds-WP_240365763.1;Parent=gene-PKHYL_RS01060;Dbxref=Genbank:WP_240365763.1;Name=WP_240365763.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01060;product=hypothetical protein;protein_id=WP_240365763.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	214153	215154	.	+	.	ID=gene-PKHYL_RS01065;Name=PKHYL_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01065;old_locus_tag=PKHYL_02590
NZ_AP019516.1	Protein Homology	CDS	214153	215154	.	+	0	ID=cds-WP_240365764.1;Parent=gene-PKHYL_RS01065;Dbxref=Genbank:WP_240365764.1;Name=WP_240365764.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012602.2;locus_tag=PKHYL_RS01065;product=molybdopterin-dependent oxidoreductase;protein_id=WP_240365764.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	215124	215261	.	+	.	ID=gene-PKHYL_RS01070;Name=PKHYL_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01070;old_locus_tag=PKHYL_02600
NZ_AP019516.1	GeneMarkS-2+	CDS	215124	215261	.	+	0	ID=cds-WP_240365765.1;Parent=gene-PKHYL_RS01070;Dbxref=Genbank:WP_240365765.1;Name=WP_240365765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01070;product=hypothetical protein;protein_id=WP_240365765.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	215338	216349	.	+	.	ID=gene-PKHYL_RS01075;Name=PKHYL_RS01075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01075;old_locus_tag=PKHYL_02610;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	215338	216349	.	+	0	ID=cds-PKHYL_RS01075;Parent=gene-PKHYL_RS01075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013717.2;locus_tag=PKHYL_RS01075;product=molybdopterin oxidoreductase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	216440	217765	.	-	.	ID=gene-PKHYL_RS01080;Name=PKHYL_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01080;old_locus_tag=PKHYL_02630
NZ_AP019516.1	Protein Homology	CDS	216440	217765	.	-	0	ID=cds-WP_240365766.1;Parent=gene-PKHYL_RS01080;Dbxref=Genbank:WP_240365766.1;Name=WP_240365766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196093.1;locus_tag=PKHYL_RS01080;product=D-amino acid dehydrogenase;protein_id=WP_240365766.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	217857	218611	.	-	.	ID=gene-PKHYL_RS01085;Name=PKHYL_RS01085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01085;old_locus_tag=PKHYL_02640;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	217857	218611	.	-	0	ID=cds-PKHYL_RS01085;Parent=gene-PKHYL_RS01085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512543.1;locus_tag=PKHYL_RS01085;product=folate-binding Fe/S cluster repair protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	218927	219280	.	+	.	ID=gene-PKHYL_RS01090;Name=PKHYL_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01090;old_locus_tag=PKHYL_02660
NZ_AP019516.1	Protein Homology	CDS	218927	219280	.	+	0	ID=cds-WP_071002514.1;Parent=gene-PKHYL_RS01090;Dbxref=Genbank:WP_071002514.1;Name=WP_071002514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512544.1;locus_tag=PKHYL_RS01090;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_071002514.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	219387	220688	.	+	.	ID=gene-PKHYL_RS01095;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=PKHYL_RS01095;old_locus_tag=PKHYL_02670
NZ_AP019516.1	Protein Homology	CDS	219387	220688	.	+	0	ID=cds-WP_240365767.1;Parent=gene-PKHYL_RS01095;Dbxref=Genbank:WP_240365767.1;Name=WP_240365767.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520037.1;locus_tag=PKHYL_RS01095;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_240365767.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	220738	221095	.	-	.	ID=gene-PKHYL_RS01100;Name=PKHYL_RS01100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01100;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	220738	221095	.	-	0	ID=cds-PKHYL_RS01100;Parent=gene-PKHYL_RS01100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512546.1;locus_tag=PKHYL_RS01100;product=DUF962 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	221549	223111	.	+	.	ID=gene-PKHYL_RS01105;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=PKHYL_RS01105;old_locus_tag=PKHYL_02680
NZ_AP019516.1	Protein Homology	CDS	221549	223111	.	+	0	ID=cds-WP_071002510.1;Parent=gene-PKHYL_RS01105;Dbxref=Genbank:WP_071002510.1;Name=WP_071002510.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394346.1;locus_tag=PKHYL_RS01105;product=exopolyphosphatase;protein_id=WP_071002510.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	223277	224081	.	+	.	ID=gene-PKHYL_RS01110;Name=PKHYL_RS01110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01110;old_locus_tag=PKHYL_02690;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	223277	224081	.	+	0	ID=cds-PKHYL_RS01110;Parent=gene-PKHYL_RS01110;Note=frameshifted;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672433.1;locus_tag=PKHYL_RS01110;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	224216	225721	.	+	.	ID=gene-PKHYL_RS01115;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=PKHYL_RS01115;old_locus_tag=PKHYL_02710
NZ_AP019516.1	Protein Homology	CDS	224216	225721	.	+	0	ID=cds-WP_240365768.1;Parent=gene-PKHYL_RS01115;Dbxref=Genbank:WP_240365768.1;Name=WP_240365768.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196079.1;locus_tag=PKHYL_RS01115;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_240365768.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	226095	226928	.	+	.	ID=gene-PKHYL_RS01120;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=PKHYL_RS01120;old_locus_tag=PKHYL_02720
NZ_AP019516.1	Protein Homology	CDS	226095	226928	.	+	0	ID=cds-WP_240365769.1;Parent=gene-PKHYL_RS01120;Dbxref=Genbank:WP_240365769.1;Name=WP_240365769.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442547.1;locus_tag=PKHYL_RS01120;product=pyrroline-5-carboxylate reductase;protein_id=WP_240365769.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	227071	227379	.	+	.	ID=gene-PKHYL_RS01125;Name=PKHYL_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01125;old_locus_tag=PKHYL_02730
NZ_AP019516.1	GeneMarkS-2+	CDS	227071	227379	.	+	0	ID=cds-WP_240365770.1;Parent=gene-PKHYL_RS01125;Dbxref=Genbank:WP_240365770.1;Name=WP_240365770.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01125;product=hypothetical protein;protein_id=WP_240365770.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	227379	227639	.	+	.	ID=gene-PKHYL_RS01130;Name=PKHYL_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01130;old_locus_tag=PKHYL_02740
NZ_AP019516.1	Protein Homology	CDS	227379	227639	.	+	0	ID=cds-WP_240365771.1;Parent=gene-PKHYL_RS01130;Dbxref=Genbank:WP_240365771.1;Name=WP_240365771.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014389.2;locus_tag=PKHYL_RS01130;product=YggT family protein;protein_id=WP_240365771.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	227771	228565	.	-	.	ID=gene-PKHYL_RS01135;Name=PKHYL_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01135;old_locus_tag=PKHYL_02750
NZ_AP019516.1	Protein Homology	CDS	227771	228565	.	-	0	ID=cds-WP_240365772.1;Parent=gene-PKHYL_RS01135;Dbxref=Genbank:WP_240365772.1;Name=WP_240365772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767535.1;locus_tag=PKHYL_RS01135;product=hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;protein_id=WP_240365772.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	228783	228917	.	+	.	ID=gene-PKHYL_RS17005;Name=PKHYL_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17005
NZ_AP019516.1	GeneMarkS-2+	CDS	228783	228917	.	+	0	ID=cds-WP_269778211.1;Parent=gene-PKHYL_RS17005;Dbxref=Genbank:WP_269778211.1;Name=WP_269778211.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17005;product=hypothetical protein;protein_id=WP_269778211.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	228937	229800	.	+	.	ID=gene-PKHYL_RS01140;Name=PKHYL_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01140;old_locus_tag=PKHYL_02760
NZ_AP019516.1	Protein Homology	CDS	228937	229800	.	+	0	ID=cds-WP_240365773.1;Parent=gene-PKHYL_RS01140;Dbxref=Genbank:WP_240365773.1;Name=WP_240365773.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=PKHYL_RS01140;product=IS30 family transposase;protein_id=WP_240365773.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	230117	230206	.	+	.	ID=gene-PKHYL_RS01145;Name=PKHYL_RS01145;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS01145;old_locus_tag=PKHYL_t00030
NZ_AP019516.1	tRNAscan-SE	tRNA	230117	230206	.	+	.	ID=rna-PKHYL_RS01145;Parent=gene-PKHYL_RS01145;anticodon=(pos:230151..230153);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS01145;product=tRNA-Ser
NZ_AP019516.1	tRNAscan-SE	exon	230117	230206	.	+	.	ID=exon-PKHYL_RS01145-1;Parent=rna-PKHYL_RS01145;anticodon=(pos:230151..230153);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS01145;product=tRNA-Ser
NZ_AP019516.1	RefSeq	gene	230390	230464	.	+	.	ID=gene-PKHYL_RS01150;Name=PKHYL_RS01150;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS01150;old_locus_tag=PKHYL_t00040
NZ_AP019516.1	tRNAscan-SE	tRNA	230390	230464	.	+	.	ID=rna-PKHYL_RS01150;Parent=gene-PKHYL_RS01150;anticodon=(pos:230424..230426);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS01150;product=tRNA-Arg
NZ_AP019516.1	tRNAscan-SE	exon	230390	230464	.	+	.	ID=exon-PKHYL_RS01150-1;Parent=rna-PKHYL_RS01150;anticodon=(pos:230424..230426);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS01150;product=tRNA-Arg
NZ_AP019516.1	RefSeq	pseudogene	230697	231359	.	+	.	ID=gene-PKHYL_RS01155;Name=PKHYL_RS01155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01155;old_locus_tag=PKHYL_02770;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	230697	231359	.	+	0	ID=cds-PKHYL_RS01155;Parent=gene-PKHYL_RS01155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442550.1;locus_tag=PKHYL_RS01155;product=RDD family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	231405	232379	.	-	.	ID=gene-PKHYL_RS01160;Name=PKHYL_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01160;old_locus_tag=PKHYL_02780
NZ_AP019516.1	Protein Homology	CDS	231405	232379	.	-	0	ID=cds-WP_240365774.1;Parent=gene-PKHYL_RS01160;Dbxref=Genbank:WP_240365774.1;Name=WP_240365774.1;Ontology_term=GO:0098662,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=inorganic cation transmembrane transport|0098662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019838459.1;locus_tag=PKHYL_RS01160;product=calcium/sodium antiporter;protein_id=WP_240365774.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	232569	232949	.	-	.	ID=gene-PKHYL_RS01165;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=PKHYL_RS01165;old_locus_tag=PKHYL_02790
NZ_AP019516.1	Protein Homology	CDS	232569	232949	.	-	0	ID=cds-WP_010196068.1;Parent=gene-PKHYL_RS01165;Dbxref=Genbank:WP_010196068.1;Name=WP_010196068.1;Ontology_term=GO:0015940,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279481.1;locus_tag=PKHYL_RS01165;product=aspartate 1-decarboxylase;protein_id=WP_010196068.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	233050	233632	.	-	.	ID=gene-PKHYL_RS01170;Name=pth;gbkey=Gene;gene=pth;gene_biotype=pseudogene;locus_tag=PKHYL_RS01170;old_locus_tag=PKHYL_02800;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	233050	233632	.	-	0	ID=cds-PKHYL_RS01170;Parent=gene-PKHYL_RS01170;Note=frameshifted;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279482.1;locus_tag=PKHYL_RS01170;product=aminoacyl-tRNA hydrolase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	234089	234776	.	-	.	ID=gene-PKHYL_RS01175;Name=PKHYL_RS01175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01175;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	234089	234776	.	-	0	ID=cds-PKHYL_RS01175;Parent=gene-PKHYL_RS01175;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0008097;gbkey=CDS;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673142.1;locus_tag=PKHYL_RS01175;product=50S ribosomal protein L25/general stress protein Ctc;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	235183	236130	.	-	.	ID=gene-PKHYL_RS01180;Name=PKHYL_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01180;old_locus_tag=PKHYL_02830
NZ_AP019516.1	Protein Homology	CDS	235183	236130	.	-	0	ID=cds-WP_057758042.1;Parent=gene-PKHYL_RS01180;Dbxref=Genbank:WP_057758042.1;Name=WP_057758042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279484.1;locus_tag=PKHYL_RS01180;product=ribose-phosphate pyrophosphokinase;protein_id=WP_057758042.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	236240	236315	.	-	.	ID=gene-PKHYL_RS01185;Name=PKHYL_RS01185;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS01185;old_locus_tag=PKHYL_t00050
NZ_AP019516.1	tRNAscan-SE	tRNA	236240	236315	.	-	.	ID=rna-PKHYL_RS01185;Parent=gene-PKHYL_RS01185;anticodon=(pos:complement(236280..236282));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS01185;product=tRNA-Gln
NZ_AP019516.1	tRNAscan-SE	exon	236240	236315	.	-	.	ID=exon-PKHYL_RS01185-1;Parent=rna-PKHYL_RS01185;anticodon=(pos:complement(236280..236282));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS01185;product=tRNA-Gln
NZ_AP019516.1	RefSeq	gene	236556	236631	.	-	.	ID=gene-PKHYL_RS01190;Name=PKHYL_RS01190;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS01190;old_locus_tag=PKHYL_t00060
NZ_AP019516.1	tRNAscan-SE	tRNA	236556	236631	.	-	.	ID=rna-PKHYL_RS01190;Parent=gene-PKHYL_RS01190;anticodon=(pos:complement(236596..236598));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS01190;product=tRNA-Gln
NZ_AP019516.1	tRNAscan-SE	exon	236556	236631	.	-	.	ID=exon-PKHYL_RS01190-1;Parent=rna-PKHYL_RS01190;anticodon=(pos:complement(236596..236598));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS01190;product=tRNA-Gln
NZ_AP019516.1	RefSeq	gene	236981	237382	.	-	.	ID=gene-PKHYL_RS01195;Name=PKHYL_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01195;old_locus_tag=PKHYL_02840
NZ_AP019516.1	GeneMarkS-2+	CDS	236981	237382	.	-	0	ID=cds-WP_240365775.1;Parent=gene-PKHYL_RS01195;Dbxref=Genbank:WP_240365775.1;Name=WP_240365775.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01195;product=hypothetical protein;protein_id=WP_240365775.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	237379	237951	.	-	.	ID=gene-PKHYL_RS01200;Name=PKHYL_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01200;old_locus_tag=PKHYL_02850
NZ_AP019516.1	Protein Homology	CDS	237379	237951	.	-	0	ID=cds-WP_240365776.1;Parent=gene-PKHYL_RS01200;Dbxref=Genbank:WP_240365776.1;Name=WP_240365776.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012509.2;locus_tag=PKHYL_RS01200;product=hypothetical protein;protein_id=WP_240365776.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	237905	238348	.	-	.	ID=gene-PKHYL_RS01205;Name=PKHYL_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01205;old_locus_tag=PKHYL_02860
NZ_AP019516.1	GeneMarkS-2+	CDS	237905	238348	.	-	0	ID=cds-WP_240365777.1;Parent=gene-PKHYL_RS01205;Dbxref=Genbank:WP_240365777.1;Name=WP_240365777.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01205;product=hypothetical protein;protein_id=WP_240365777.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	238438	239067	.	-	.	ID=gene-PKHYL_RS01210;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=PKHYL_RS01210;old_locus_tag=PKHYL_02870
NZ_AP019516.1	Protein Homology	CDS	238438	239067	.	-	0	ID=cds-WP_071002491.1;Parent=gene-PKHYL_RS01210;Dbxref=Genbank:WP_071002491.1;Name=WP_071002491.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196056.1;locus_tag=PKHYL_RS01210;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_071002491.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	239246	239578	.	-	.	ID=gene-PKHYL_RS01215;Name=PKHYL_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01215;old_locus_tag=PKHYL_02880
NZ_AP019516.1	GeneMarkS-2+	CDS	239246	239578	.	-	0	ID=cds-WP_240365778.1;Parent=gene-PKHYL_RS01215;Dbxref=Genbank:WP_240365778.1;Name=WP_240365778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01215;product=hypothetical protein;protein_id=WP_240365778.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	239562	240218	.	-	.	ID=gene-PKHYL_RS01220;Name=PKHYL_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01220;old_locus_tag=PKHYL_02890
NZ_AP019516.1	Protein Homology	CDS	239562	240218	.	-	0	ID=cds-WP_240365779.1;Parent=gene-PKHYL_RS01220;Dbxref=Genbank:WP_240365779.1;Name=WP_240365779.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF024572.2;locus_tag=PKHYL_RS01220;product=tetratricopeptide repeat protein;protein_id=WP_240365779.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	240229	241185	.	-	.	ID=gene-PKHYL_RS01225;Name=PKHYL_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01225;old_locus_tag=PKHYL_02900
NZ_AP019516.1	GeneMarkS-2+	CDS	240229	241185	.	-	0	ID=cds-WP_240365780.1;Parent=gene-PKHYL_RS01225;Dbxref=Genbank:WP_240365780.1;Name=WP_240365780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01225;product=hypothetical protein;protein_id=WP_240365780.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	241737	243128	.	+	.	ID=gene-PKHYL_RS01230;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=PKHYL_RS01230;old_locus_tag=PKHYL_02910
NZ_AP019516.1	Protein Homology	CDS	241737	243128	.	+	0	ID=cds-WP_071002488.1;Parent=gene-PKHYL_RS01230;Dbxref=Genbank:WP_071002488.1;Name=WP_071002488.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959600.1;locus_tag=PKHYL_RS01230;product=glutamyl-tRNA reductase;protein_id=WP_071002488.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	243440	244438	.	+	.	ID=gene-PKHYL_RS01235;Name=PKHYL_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01235;old_locus_tag=PKHYL_02920
NZ_AP019516.1	Protein Homology	CDS	243440	244438	.	+	0	ID=cds-WP_240365781.1;Parent=gene-PKHYL_RS01235;Dbxref=Genbank:WP_240365781.1;Name=WP_240365781.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=PKHYL_RS01235;product=IS30 family transposase;protein_id=WP_240365781.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	244703	245838	.	+	.	ID=gene-PKHYL_RS01240;Name=PKHYL_RS01240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01240;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	244703	245838	.	+	0	ID=cds-PKHYL_RS01240;Parent=gene-PKHYL_RS01240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196048.1;locus_tag=PKHYL_RS01240;product=aminotransferase class V-fold PLP-dependent enzyme;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	246043	246479	.	+	.	ID=gene-PKHYL_RS01245;Name=PKHYL_RS01245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01245;old_locus_tag=PKHYL_02950;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	246043	246479	.	+	0	ID=cds-PKHYL_RS01245;Parent=gene-PKHYL_RS01245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512564.1;locus_tag=PKHYL_RS01245;product=YeeE/YedE family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	246575	246994	.	+	.	ID=gene-PKHYL_RS01250;Name=PKHYL_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01250;old_locus_tag=PKHYL_02960
NZ_AP019516.1	Protein Homology	CDS	246575	246994	.	+	0	ID=cds-WP_071002483.1;Parent=gene-PKHYL_RS01250;Dbxref=Genbank:WP_071002483.1;Name=WP_071002483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196042.1;locus_tag=PKHYL_RS01250;product=hypothetical protein;protein_id=WP_071002483.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	247090	248754	.	-	.	ID=gene-PKHYL_RS01255;Name=PKHYL_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01255;old_locus_tag=PKHYL_02970
NZ_AP019516.1	Protein Homology	CDS	247090	248754	.	-	0	ID=cds-WP_240365782.1;Parent=gene-PKHYL_RS01255;Dbxref=Genbank:WP_240365782.1;Name=WP_240365782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279492.1;locus_tag=PKHYL_RS01255;product=AMP-binding protein;protein_id=WP_240365782.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	249154	251287	.	+	.	ID=gene-PKHYL_RS01260;Name=PKHYL_RS01260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01260;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	249154	251287	.	+	0	ID=cds-PKHYL_RS01260;Parent=gene-PKHYL_RS01260;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442561.1;locus_tag=PKHYL_RS01260;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	251606	252169	.	-	.	ID=gene-PKHYL_RS01265;Name=PKHYL_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01265;old_locus_tag=PKHYL_03010
NZ_AP019516.1	GeneMarkS-2+	CDS	251606	252169	.	-	0	ID=cds-WP_071002480.1;Parent=gene-PKHYL_RS01265;Dbxref=Genbank:WP_071002480.1;Name=WP_071002480.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01265;product=hypothetical protein;protein_id=WP_071002480.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	252273	252968	.	-	.	ID=gene-PKHYL_RS01270;Name=PKHYL_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01270;old_locus_tag=PKHYL_03020
NZ_AP019516.1	Protein Homology	CDS	252273	252968	.	-	0	ID=cds-WP_240366472.1;Parent=gene-PKHYL_RS01270;Dbxref=Genbank:WP_240366472.1;Name=WP_240366472.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00545.1;locus_tag=PKHYL_RS01270;product=hypothetical protein;protein_id=WP_240366472.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	252953	253276	.	-	.	ID=gene-PKHYL_RS01275;Name=PKHYL_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01275;old_locus_tag=PKHYL_03030
NZ_AP019516.1	GeneMarkS-2+	CDS	252953	253276	.	-	0	ID=cds-WP_240365783.1;Parent=gene-PKHYL_RS01275;Dbxref=Genbank:WP_240365783.1;Name=WP_240365783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01275;product=hypothetical protein;protein_id=WP_240365783.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	253551	253997	.	+	.	ID=gene-PKHYL_RS01280;Name=PKHYL_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01280;old_locus_tag=PKHYL_03040
NZ_AP019516.1	Protein Homology	CDS	253551	253997	.	+	0	ID=cds-WP_240365784.1;Parent=gene-PKHYL_RS01280;Dbxref=Genbank:WP_240365784.1;Name=WP_240365784.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022633.2;locus_tag=PKHYL_RS01280;product=DUF2971 domain-containing protein;protein_id=WP_240365784.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	254541	254795	.	-	.	ID=gene-PKHYL_RS01285;Name=PKHYL_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01285;old_locus_tag=PKHYL_03050
NZ_AP019516.1	GeneMarkS-2+	CDS	254541	254795	.	-	0	ID=cds-WP_071002476.1;Parent=gene-PKHYL_RS01285;Dbxref=Genbank:WP_071002476.1;Name=WP_071002476.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01285;product=hypothetical protein;protein_id=WP_071002476.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	255423	255764	.	+	.	ID=gene-PKHYL_RS01290;Name=PKHYL_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01290
NZ_AP019516.1	Protein Homology	CDS	255423	255764	.	+	0	ID=cds-WP_240365785.1;Parent=gene-PKHYL_RS01290;Dbxref=Genbank:WP_240365785.1;Name=WP_240365785.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013088.2;locus_tag=PKHYL_RS01290;product=EamA family transporter;protein_id=WP_240365785.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	255688	256350	.	+	.	ID=gene-PKHYL_RS01295;Name=PKHYL_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01295;old_locus_tag=PKHYL_03060
NZ_AP019516.1	Protein Homology	CDS	255688	256350	.	+	0	ID=cds-WP_240365786.1;Parent=gene-PKHYL_RS01295;Dbxref=Genbank:WP_240365786.1;Name=WP_240365786.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013088.2;locus_tag=PKHYL_RS01295;product=DMT family transporter;protein_id=WP_240365786.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	256592	256999	.	+	.	ID=gene-PKHYL_RS17010;Name=PKHYL_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17010;old_locus_tag=PKHYL_03070
NZ_AP019516.1	Protein Homology	CDS	256592	256999	.	+	0	ID=cds-WP_269778212.1;Parent=gene-PKHYL_RS17010;Dbxref=Genbank:WP_269778212.1;Name=WP_269778212.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012927.2;locus_tag=PKHYL_RS17010;product=hypothetical protein;protein_id=WP_269778212.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	256920	257699	.	+	.	ID=gene-PKHYL_RS01300;Name=PKHYL_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01300;old_locus_tag=PKHYL_03080
NZ_AP019516.1	Protein Homology	CDS	256920	257699	.	+	0	ID=cds-WP_269778213.1;Parent=gene-PKHYL_RS01300;Dbxref=Genbank:WP_269778213.1;Name=WP_269778213.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012927.2;locus_tag=PKHYL_RS01300;product=hypothetical protein;protein_id=WP_269778213.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	257797	258813	.	-	.	ID=gene-PKHYL_RS01305;Name=PKHYL_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01305;old_locus_tag=PKHYL_03090
NZ_AP019516.1	Protein Homology	CDS	257797	258813	.	-	0	ID=cds-WP_240365787.1;Parent=gene-PKHYL_RS01305;Dbxref=Genbank:WP_240365787.1;Name=WP_240365787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196022.1;locus_tag=PKHYL_RS01305;product=pirin family protein;protein_id=WP_240365787.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	258930	260214	.	-	.	ID=gene-PKHYL_RS01310;Name=PKHYL_RS01310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01310;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	258930	260214	.	-	0	ID=cds-PKHYL_RS01310;Parent=gene-PKHYL_RS01310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004987344.1;locus_tag=PKHYL_RS01310;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	260652	262613	.	+	.	ID=gene-PKHYL_RS01315;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=PKHYL_RS01315;old_locus_tag=PKHYL_03120
NZ_AP019516.1	Protein Homology	CDS	260652	262613	.	+	0	ID=cds-WP_071002467.1;Parent=gene-PKHYL_RS01315;Dbxref=Genbank:WP_071002467.1;Name=WP_071002467.1;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279496.1;locus_tag=PKHYL_RS01315;product=acetate--CoA ligase;protein_id=WP_071002467.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	262873	264036	.	+	.	ID=gene-PKHYL_RS01320;Name=PKHYL_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01320;old_locus_tag=PKHYL_03130
NZ_AP019516.1	Protein Homology	CDS	262873	264036	.	+	0	ID=cds-WP_212563995.1;Parent=gene-PKHYL_RS01320;Dbxref=Genbank:WP_212563995.1;Name=WP_212563995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196001.1;locus_tag=PKHYL_RS01320;product=NAD(P)-binding protein;protein_id=WP_212563995.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	264337	264501	.	+	.	ID=gene-PKHYL_RS01325;Name=PKHYL_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01325;old_locus_tag=PKHYL_03140
NZ_AP019516.1	GeneMarkS-2+	CDS	264337	264501	.	+	0	ID=cds-WP_240365788.1;Parent=gene-PKHYL_RS01325;Dbxref=Genbank:WP_240365788.1;Name=WP_240365788.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01325;product=hypothetical protein;protein_id=WP_240365788.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	264512	265195	.	+	.	ID=gene-PKHYL_RS01330;Name=PKHYL_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01330;old_locus_tag=PKHYL_03150
NZ_AP019516.1	GeneMarkS-2+	CDS	264512	265195	.	+	0	ID=cds-WP_240365789.1;Parent=gene-PKHYL_RS01330;Dbxref=Genbank:WP_240365789.1;Name=WP_240365789.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01330;product=hypothetical protein;protein_id=WP_240365789.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	265197	265673	.	+	.	ID=gene-PKHYL_RS01335;Name=PKHYL_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01335;old_locus_tag=PKHYL_03160
NZ_AP019516.1	GeneMarkS-2+	CDS	265197	265673	.	+	0	ID=cds-WP_240365790.1;Parent=gene-PKHYL_RS01335;Dbxref=Genbank:WP_240365790.1;Name=WP_240365790.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01335;product=hypothetical protein;protein_id=WP_240365790.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	265789	266112	.	+	.	ID=gene-PKHYL_RS01340;Name=PKHYL_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01340;old_locus_tag=PKHYL_03170
NZ_AP019516.1	GeneMarkS-2+	CDS	265789	266112	.	+	0	ID=cds-WP_240365791.1;Parent=gene-PKHYL_RS01340;Dbxref=Genbank:WP_240365791.1;Name=WP_240365791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01340;product=hypothetical protein;protein_id=WP_240365791.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	266131	266973	.	+	.	ID=gene-PKHYL_RS01345;Name=PKHYL_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01345;old_locus_tag=PKHYL_03180
NZ_AP019516.1	GeneMarkS-2+	CDS	266131	266973	.	+	0	ID=cds-WP_240365792.1;Parent=gene-PKHYL_RS01345;Dbxref=Genbank:WP_240365792.1;Name=WP_240365792.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01345;product=hypothetical protein;protein_id=WP_240365792.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	267080	267493	.	+	.	ID=gene-PKHYL_RS01350;Name=PKHYL_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01350;old_locus_tag=PKHYL_03190
NZ_AP019516.1	Protein Homology	CDS	267080	267493	.	+	0	ID=cds-WP_240365793.1;Parent=gene-PKHYL_RS01350;Dbxref=Genbank:WP_240365793.1;Name=WP_240365793.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: protein motif:HMM:NF018262.2;locus_tag=PKHYL_RS01350;product=antiterminator Q family protein;protein_id=WP_240365793.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	267709	268446	.	+	.	ID=gene-PKHYL_RS01355;Name=PKHYL_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01355;old_locus_tag=PKHYL_03200
NZ_AP019516.1	GeneMarkS-2+	CDS	267709	268446	.	+	0	ID=cds-WP_240365794.1;Parent=gene-PKHYL_RS01355;Dbxref=Genbank:WP_240365794.1;Name=WP_240365794.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01355;product=hypothetical protein;protein_id=WP_240365794.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	268523	269881	.	+	.	ID=gene-PKHYL_RS01360;Name=PKHYL_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01360;old_locus_tag=PKHYL_03210
NZ_AP019516.1	GeneMarkS-2+	CDS	268523	269881	.	+	0	ID=cds-WP_240365795.1;Parent=gene-PKHYL_RS01360;Dbxref=Genbank:WP_240365795.1;Name=WP_240365795.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01360;product=hypothetical protein;protein_id=WP_240365795.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	270030	270584	.	+	.	ID=gene-PKHYL_RS01365;Name=PKHYL_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01365;old_locus_tag=PKHYL_03220
NZ_AP019516.1	GeneMarkS-2+	CDS	270030	270584	.	+	0	ID=cds-WP_240365796.1;Parent=gene-PKHYL_RS01365;Dbxref=Genbank:WP_240365796.1;Name=WP_240365796.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01365;product=hypothetical protein;protein_id=WP_240365796.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	270783	271013	.	+	.	ID=gene-PKHYL_RS01370;Name=PKHYL_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01370;old_locus_tag=PKHYL_03230
NZ_AP019516.1	GeneMarkS-2+	CDS	270783	271013	.	+	0	ID=cds-WP_240365797.1;Parent=gene-PKHYL_RS01370;Dbxref=Genbank:WP_240365797.1;Name=WP_240365797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01370;product=helix-turn-helix domain-containing protein;protein_id=WP_240365797.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	271016	271300	.	+	.	ID=gene-PKHYL_RS01375;Name=PKHYL_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01375;old_locus_tag=PKHYL_03240
NZ_AP019516.1	Protein Homology	CDS	271016	271300	.	+	0	ID=cds-WP_240365798.1;Parent=gene-PKHYL_RS01375;Dbxref=Genbank:WP_240365798.1;Name=WP_240365798.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025456.2;locus_tag=PKHYL_RS01375;product=helix-turn-helix domain-containing protein;protein_id=WP_240365798.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	271297	271572	.	+	.	ID=gene-PKHYL_RS01380;Name=PKHYL_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01380;old_locus_tag=PKHYL_03250
NZ_AP019516.1	Protein Homology	CDS	271297	271572	.	+	0	ID=cds-WP_240365799.1;Parent=gene-PKHYL_RS01380;Dbxref=Genbank:WP_240365799.1;Name=WP_240365799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196988.1;locus_tag=PKHYL_RS01380;product=hypothetical protein;protein_id=WP_240365799.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	271565	271837	.	+	.	ID=gene-PKHYL_RS01385;Name=PKHYL_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01385;old_locus_tag=PKHYL_03260
NZ_AP019516.1	GeneMarkS-2+	CDS	271565	271837	.	+	0	ID=cds-WP_240365800.1;Parent=gene-PKHYL_RS01385;Dbxref=Genbank:WP_240365800.1;Name=WP_240365800.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01385;product=hypothetical protein;protein_id=WP_240365800.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	272084	272398	.	+	.	ID=gene-PKHYL_RS01390;Name=PKHYL_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01390;old_locus_tag=PKHYL_03280
NZ_AP019516.1	GeneMarkS-2+	CDS	272084	272398	.	+	0	ID=cds-WP_240365801.1;Parent=gene-PKHYL_RS01390;Dbxref=Genbank:WP_240365801.1;Name=WP_240365801.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01390;product=hypothetical protein;protein_id=WP_240365801.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	272611	272826	.	-	.	ID=gene-PKHYL_RS01395;Name=PKHYL_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01395
NZ_AP019516.1	GeneMarkS-2+	CDS	272611	272826	.	-	0	ID=cds-WP_240365802.1;Parent=gene-PKHYL_RS01395;Dbxref=Genbank:WP_240365802.1;Name=WP_240365802.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01395;product=hypothetical protein;protein_id=WP_240365802.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	273013	273201	.	+	.	ID=gene-PKHYL_RS01400;Name=PKHYL_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01400;old_locus_tag=PKHYL_03300
NZ_AP019516.1	GeneMarkS-2+	CDS	273013	273201	.	+	0	ID=cds-WP_240365803.1;Parent=gene-PKHYL_RS01400;Dbxref=Genbank:WP_240365803.1;Name=WP_240365803.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01400;product=hypothetical protein;protein_id=WP_240365803.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	273555	275471	.	+	.	ID=gene-PKHYL_RS01405;Name=PKHYL_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01405;old_locus_tag=PKHYL_03310
NZ_AP019516.1	Protein Homology	CDS	273555	275471	.	+	0	ID=cds-WP_240365804.1;Parent=gene-PKHYL_RS01405;Dbxref=Genbank:WP_240365804.1;Name=WP_240365804.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024547.2;locus_tag=PKHYL_RS01405;product=DUF3987 domain-containing protein;protein_id=WP_240365804.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	277888	278568	.	+	.	ID=gene-PKHYL_RS01410;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=PKHYL_RS01410;old_locus_tag=PKHYL_03320
NZ_AP019516.1	Protein Homology	CDS	277888	278568	.	+	0	ID=cds-WP_071003712.1;Parent=gene-PKHYL_RS01410;Dbxref=Genbank:WP_071003712.1;Name=WP_071003712.1;Ontology_term=GO:0008654,GO:0008444;gbkey=CDS;gene=pgsA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195999.1;locus_tag=PKHYL_RS01410;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_071003712.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	278669	279163	.	-	.	ID=gene-PKHYL_RS01415;Name=PKHYL_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01415;old_locus_tag=PKHYL_03330
NZ_AP019516.1	Protein Homology	CDS	278669	279163	.	-	0	ID=cds-WP_240365805.1;Parent=gene-PKHYL_RS01415;Dbxref=Genbank:WP_240365805.1;Name=WP_240365805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195997.1;locus_tag=PKHYL_RS01415;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_240365805.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	279475	279675	.	-	.	ID=gene-PKHYL_RS01420;Name=PKHYL_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01420
NZ_AP019516.1	Protein Homology	CDS	279475	279675	.	-	0	ID=cds-WP_240366473.1;Parent=gene-PKHYL_RS01420;Dbxref=Genbank:WP_240366473.1;Name=WP_240366473.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027567.2;locus_tag=PKHYL_RS01420;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_240366473.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	279681	279908	.	-	.	ID=gene-PKHYL_RS01425;Name=PKHYL_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01425;old_locus_tag=PKHYL_03340
NZ_AP019516.1	Protein Homology	CDS	279681	279908	.	-	0	ID=cds-WP_240365806.1;Parent=gene-PKHYL_RS01425;Dbxref=Genbank:WP_240365806.1;Name=WP_240365806.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027567.2;locus_tag=PKHYL_RS01425;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_240365806.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	280408	284395	.	+	.	ID=gene-PKHYL_RS01440;Name=purL;gbkey=Gene;gene=purL;gene_biotype=pseudogene;gene_synonym=purI;locus_tag=PKHYL_RS01440;old_locus_tag=PKHYL_03370;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	280408	284395	.	+	0	ID=cds-PKHYL_RS01440;Parent=gene-PKHYL_RS01440;Note=frameshifted;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673496.1;locus_tag=PKHYL_RS01440;product=phosphoribosylformylglycinamidine synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	284563	284898	.	+	.	ID=gene-PKHYL_RS01445;Name=PKHYL_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01445;old_locus_tag=PKHYL_03380
NZ_AP019516.1	Protein Homology	CDS	284563	284898	.	+	0	ID=cds-WP_025643795.1;Parent=gene-PKHYL_RS01445;Dbxref=Genbank:WP_025643795.1;Name=WP_025643795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518702.1;locus_tag=PKHYL_RS01445;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_025643795.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	284888	285169	.	+	.	ID=gene-PKHYL_RS01450;Name=nadS;gbkey=Gene;gene=nadS;gene_biotype=protein_coding;locus_tag=PKHYL_RS01450;old_locus_tag=PKHYL_03390
NZ_AP019516.1	Protein Homology	CDS	284888	285169	.	+	0	ID=cds-WP_058024381.1;Parent=gene-PKHYL_RS01450;Dbxref=Genbank:WP_058024381.1;Name=WP_058024381.1;gbkey=CDS;gene=nadS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673833.1;locus_tag=PKHYL_RS01450;product=NadS family protein;protein_id=WP_058024381.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	285347	285532	.	+	.	ID=gene-PKHYL_RS01455;Name=PKHYL_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01455
NZ_AP019516.1	GeneMarkS-2+	CDS	285347	285532	.	+	0	ID=cds-WP_240365809.1;Parent=gene-PKHYL_RS01455;Dbxref=Genbank:WP_240365809.1;Name=WP_240365809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01455;product=hypothetical protein;protein_id=WP_240365809.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	285643	286038	.	+	.	ID=gene-PKHYL_RS01460;Name=PKHYL_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01460;old_locus_tag=PKHYL_03400
NZ_AP019516.1	GeneMarkS-2+	CDS	285643	286038	.	+	0	ID=cds-WP_071002456.1;Parent=gene-PKHYL_RS01460;Dbxref=Genbank:WP_071002456.1;Name=WP_071002456.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01460;product=hypothetical protein;protein_id=WP_071002456.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	286280	286444	.	-	.	ID=gene-PKHYL_RS01465;Name=PKHYL_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01465;old_locus_tag=PKHYL_03410
NZ_AP019516.1	GeneMarkS-2+	CDS	286280	286444	.	-	0	ID=cds-WP_240365810.1;Parent=gene-PKHYL_RS01465;Dbxref=Genbank:WP_240365810.1;Name=WP_240365810.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01465;product=hypothetical protein;protein_id=WP_240365810.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	286460	286624	.	-	.	ID=gene-PKHYL_RS01470;Name=PKHYL_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01470;old_locus_tag=PKHYL_03420
NZ_AP019516.1	GeneMarkS-2+	CDS	286460	286624	.	-	0	ID=cds-WP_240365811.1;Parent=gene-PKHYL_RS01470;Dbxref=Genbank:WP_240365811.1;Name=WP_240365811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01470;product=hypothetical protein;protein_id=WP_240365811.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	286608	287207	.	-	.	ID=gene-PKHYL_RS01475;Name=PKHYL_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01475;old_locus_tag=PKHYL_03430
NZ_AP019516.1	Protein Homology	CDS	286608	287207	.	-	0	ID=cds-WP_240365812.1;Parent=gene-PKHYL_RS01475;Dbxref=Genbank:WP_240365812.1;Name=WP_240365812.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012345.2;locus_tag=PKHYL_RS01475;product=type 1 glutamine amidotransferase;protein_id=WP_240365812.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	287233	287979	.	-	.	ID=gene-PKHYL_RS01480;Name=PKHYL_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01480;old_locus_tag=PKHYL_03440
NZ_AP019516.1	Protein Homology	CDS	287233	287979	.	-	0	ID=cds-WP_071002451.1;Parent=gene-PKHYL_RS01480;Dbxref=Genbank:WP_071002451.1;Name=WP_071002451.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195968.1;locus_tag=PKHYL_RS01480;product=pyridoxine 5'-phosphate synthase;protein_id=WP_071002451.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	288150	289058	.	-	.	ID=gene-PKHYL_RS01485;Name=PKHYL_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01485;old_locus_tag=PKHYL_03450
NZ_AP019516.1	Protein Homology	CDS	288150	289058	.	-	0	ID=cds-WP_240365813.1;Parent=gene-PKHYL_RS01485;Dbxref=Genbank:WP_240365813.1;Name=WP_240365813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959831.1;locus_tag=PKHYL_RS01485;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_240365813.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	289132	289380	.	-	.	ID=gene-PKHYL_RS01490;Name=PKHYL_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01490;old_locus_tag=PKHYL_03460
NZ_AP019516.1	GeneMarkS-2+	CDS	289132	289380	.	-	0	ID=cds-WP_071002448.1;Parent=gene-PKHYL_RS01490;Dbxref=Genbank:WP_071002448.1;Name=WP_071002448.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01490;product=hypothetical protein;protein_id=WP_071002448.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	289395	289823	.	-	.	ID=gene-PKHYL_RS01495;Name=PKHYL_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01495;old_locus_tag=PKHYL_03470
NZ_AP019516.1	Protein Homology	CDS	289395	289823	.	-	0	ID=cds-WP_240365814.1;Parent=gene-PKHYL_RS01495;Dbxref=Genbank:WP_240365814.1;Name=WP_240365814.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017355.2;locus_tag=PKHYL_RS01495;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_240365814.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	289884	290144	.	-	.	ID=gene-PKHYL_RS01500;Name=PKHYL_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01500;old_locus_tag=PKHYL_03480
NZ_AP019516.1	Protein Homology	CDS	289884	290144	.	-	0	ID=cds-WP_071002444.1;Parent=gene-PKHYL_RS01500;Dbxref=Genbank:WP_071002444.1;Name=WP_071002444.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019540.2;locus_tag=PKHYL_RS01500;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_071002444.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	290285	291002	.	-	.	ID=gene-PKHYL_RS01505;Name=PKHYL_RS01505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01505;old_locus_tag=PKHYL_03490;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	290285	291002	.	-	0	ID=cds-PKHYL_RS01505;Parent=gene-PKHYL_RS01505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195957.1;locus_tag=PKHYL_RS01505;product=MOSC domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	291297	291710	.	-	.	ID=gene-PKHYL_RS01510;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=PKHYL_RS01510;old_locus_tag=PKHYL_03510
NZ_AP019516.1	Protein Homology	CDS	291297	291710	.	-	0	ID=cds-WP_071002442.1;Parent=gene-PKHYL_RS01510;Dbxref=Genbank:WP_071002442.1;Name=WP_071002442.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195955.1;locus_tag=PKHYL_RS01510;product=ribosome silencing factor;protein_id=WP_071002442.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	291842	292762	.	-	.	ID=gene-PKHYL_RS01515;Name=PKHYL_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01515;old_locus_tag=PKHYL_03520
NZ_AP019516.1	Protein Homology	CDS	291842	292762	.	-	0	ID=cds-WP_071002440.1;Parent=gene-PKHYL_RS01515;Dbxref=Genbank:WP_071002440.1;Name=WP_071002440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442578.1;locus_tag=PKHYL_RS01515;product=nicotinate-nicotinamide nucleotide adenylyltransferase;protein_id=WP_071002440.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	292802	293794	.	-	.	ID=gene-PKHYL_RS01520;Name=PKHYL_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01520;old_locus_tag=PKHYL_03530
NZ_AP019516.1	Protein Homology	CDS	292802	293794	.	-	0	ID=cds-WP_240365287.1;Parent=gene-PKHYL_RS01520;Dbxref=Genbank:WP_240365287.1;Name=WP_240365287.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=PKHYL_RS01520;product=IS30 family transposase;protein_id=WP_240365287.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	294180	296326	.	-	.	ID=gene-PKHYL_RS01525;Name=pta;gbkey=Gene;gene=pta;gene_biotype=pseudogene;locus_tag=PKHYL_RS01525;old_locus_tag=PKHYL_03540;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	294180	296326	.	-	0	ID=cds-PKHYL_RS01525;Parent=gene-PKHYL_RS01525;Note=frameshifted;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442579.1;locus_tag=PKHYL_RS01525;product=phosphate acetyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	296461	297692	.	-	.	ID=gene-PKHYL_RS01530;Name=PKHYL_RS01530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01530;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	296461	297692	.	-	0	ID=cds-PKHYL_RS01530;Parent=gene-PKHYL_RS01530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195949.1;locus_tag=PKHYL_RS01530;product=acetate kinase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	298407	298574	.	+	.	ID=gene-PKHYL_RS01535;Name=PKHYL_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01535
NZ_AP019516.1	GeneMarkS-2+	CDS	298407	298574	.	+	0	ID=cds-WP_240365815.1;Parent=gene-PKHYL_RS01535;Dbxref=Genbank:WP_240365815.1;Name=WP_240365815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01535;product=hypothetical protein;protein_id=WP_240365815.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	298547	298720	.	+	.	ID=gene-PKHYL_RS01540;Name=PKHYL_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01540;old_locus_tag=PKHYL_03580
NZ_AP019516.1	GeneMarkS-2+	CDS	298547	298720	.	+	0	ID=cds-WP_240365816.1;Parent=gene-PKHYL_RS01540;Dbxref=Genbank:WP_240365816.1;Name=WP_240365816.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01540;product=hypothetical protein;protein_id=WP_240365816.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	298914	300143	.	+	.	ID=gene-PKHYL_RS01545;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=PKHYL_RS01545;old_locus_tag=PKHYL_03590
NZ_AP019516.1	Protein Homology	CDS	298914	300143	.	+	0	ID=cds-WP_240366474.1;Parent=gene-PKHYL_RS01545;Dbxref=Genbank:WP_240366474.1;Name=WP_240366474.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195944.1;locus_tag=PKHYL_RS01545;product=diaminopimelate decarboxylase;protein_id=WP_240366474.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	300356	301243	.	+	.	ID=gene-PKHYL_RS01550;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=PKHYL_RS01550;old_locus_tag=PKHYL_03600
NZ_AP019516.1	Protein Homology	CDS	300356	301243	.	+	0	ID=cds-WP_093067369.1;Parent=gene-PKHYL_RS01550;Dbxref=Genbank:WP_093067369.1;Name=WP_093067369.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195942.1;locus_tag=PKHYL_RS01550;product=diaminopimelate epimerase;protein_id=WP_093067369.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	301290	302315	.	+	.	ID=gene-PKHYL_RS01555;Name=PKHYL_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01555;old_locus_tag=PKHYL_03610
NZ_AP019516.1	Protein Homology	CDS	301290	302315	.	+	0	ID=cds-WP_093067908.1;Parent=gene-PKHYL_RS01555;Dbxref=Genbank:WP_093067908.1;Name=WP_093067908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195939.1;locus_tag=PKHYL_RS01555;product=tyrosine recombinase XerC;protein_id=WP_093067908.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	302358	303257	.	-	.	ID=gene-PKHYL_RS01560;Name=PKHYL_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01560;old_locus_tag=PKHYL_03620
NZ_AP019516.1	Protein Homology	CDS	302358	303257	.	-	0	ID=cds-WP_093067373.1;Parent=gene-PKHYL_RS01560;Dbxref=Genbank:WP_093067373.1;Name=WP_093067373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279514.1;locus_tag=PKHYL_RS01560;product=carbon-nitrogen hydrolase;protein_id=WP_093067373.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	303556	305201	.	+	.	ID=gene-PKHYL_RS01565;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=pseudogene;locus_tag=PKHYL_RS01565;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	303556	305201	.	+	0	ID=cds-PKHYL_RS01565;Parent=gene-PKHYL_RS01565;Note=frameshifted;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoN;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195934.1;locus_tag=PKHYL_RS01565;product=RNA polymerase factor sigma-54;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	305644	306024	.	+	.	ID=gene-PKHYL_RS01570;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=PKHYL_RS01570;old_locus_tag=PKHYL_03660
NZ_AP019516.1	Protein Homology	CDS	305644	306024	.	+	0	ID=cds-WP_240365817.1;Parent=gene-PKHYL_RS01570;Dbxref=Genbank:WP_240365817.1;Name=WP_240365817.1;Ontology_term=GO:0009386,GO:0045182,GO:0005840,GO:0022626;gbkey=CDS;gene=raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome|0022626||IEA;go_function=translation regulator activity|0045182||IEA;go_process=translational attenuation|0009386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512597.1;locus_tag=PKHYL_RS01570;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_240365817.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	306252	306452	.	-	.	ID=gene-PKHYL_RS01575;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=PKHYL_RS01575;old_locus_tag=PKHYL_03670
NZ_AP019516.1	Protein Homology	CDS	306252	306452	.	-	0	ID=cds-WP_058025626.1;Parent=gene-PKHYL_RS01575;Dbxref=Genbank:WP_058025626.1;Name=WP_058025626.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279517.1;locus_tag=PKHYL_RS01575;product=sulfur carrier protein ThiS;protein_id=WP_058025626.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	306601	306975	.	-	.	ID=gene-PKHYL_RS01580;Name=PKHYL_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01580;old_locus_tag=PKHYL_03680
NZ_AP019516.1	Protein Homology	CDS	306601	306975	.	-	0	ID=cds-WP_240365818.1;Parent=gene-PKHYL_RS01580;Dbxref=Genbank:WP_240365818.1;Name=WP_240365818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673880.1;locus_tag=PKHYL_RS01580;product=DUF423 domain-containing protein;protein_id=WP_240365818.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	307000	307863	.	-	.	ID=gene-PKHYL_RS01585;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=PKHYL_RS01585;old_locus_tag=PKHYL_03690
NZ_AP019516.1	Protein Homology	CDS	307000	307863	.	-	0	ID=cds-WP_201587611.1;Parent=gene-PKHYL_RS01585;Dbxref=Genbank:WP_201587611.1;Name=WP_201587611.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279519.1;locus_tag=PKHYL_RS01585;product=RNA polymerase sigma factor RpoH;protein_id=WP_201587611.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	308105	308572	.	-	.	ID=gene-PKHYL_RS01590;Name=PKHYL_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01590;old_locus_tag=PKHYL_03700
NZ_AP019516.1	Protein Homology	CDS	308105	308572	.	-	0	ID=cds-WP_240365819.1;Parent=gene-PKHYL_RS01590;Dbxref=Genbank:WP_240365819.1;Name=WP_240365819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195916.1;locus_tag=PKHYL_RS01590;product=sulfurtransferase TusA family protein;protein_id=WP_240365819.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	309108	310586	.	+	.	ID=gene-PKHYL_RS01595;Name=PKHYL_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01595;old_locus_tag=PKHYL_03710
NZ_AP019516.1	Protein Homology	CDS	309108	310586	.	+	0	ID=cds-WP_240365820.1;Parent=gene-PKHYL_RS01595;Dbxref=Genbank:WP_240365820.1;Name=WP_240365820.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013594.2;locus_tag=PKHYL_RS01595;product=M48 family metalloprotease;protein_id=WP_240365820.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	310691	311140	.	-	.	ID=gene-PKHYL_RS01600;Name=PKHYL_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01600;old_locus_tag=PKHYL_03720
NZ_AP019516.1	Protein Homology	CDS	310691	311140	.	-	0	ID=cds-WP_240365821.1;Parent=gene-PKHYL_RS01600;Dbxref=Genbank:WP_240365821.1;Name=WP_240365821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512603.1;locus_tag=PKHYL_RS01600;product=GatB/YqeY domain-containing protein;protein_id=WP_240365821.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	311347	311562	.	-	.	ID=gene-PKHYL_RS01605;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=PKHYL_RS01605;old_locus_tag=PKHYL_03730
NZ_AP019516.1	Protein Homology	CDS	311347	311562	.	-	0	ID=cds-WP_010195908.1;Parent=gene-PKHYL_RS01605;Dbxref=Genbank:WP_010195908.1;Name=WP_010195908.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011235429.1;locus_tag=PKHYL_RS01605;product=30S ribosomal protein S21;protein_id=WP_010195908.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	311955	312296	.	+	.	ID=gene-PKHYL_RS01610;Name=PKHYL_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01610;old_locus_tag=PKHYL_03740
NZ_AP019516.1	Protein Homology	CDS	311955	312296	.	+	0	ID=cds-WP_240366475.1;Parent=gene-PKHYL_RS01610;Dbxref=Genbank:WP_240366475.1;Name=WP_240366475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442592.1;locus_tag=PKHYL_RS01610;product=hypothetical protein;protein_id=WP_240366475.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	312514	313017	.	+	.	ID=gene-PKHYL_RS01615;Name=PKHYL_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01615;old_locus_tag=PKHYL_03750
NZ_AP019516.1	Protein Homology	CDS	312514	313017	.	+	0	ID=cds-WP_240365822.1;Parent=gene-PKHYL_RS01615;Dbxref=Genbank:WP_240365822.1;Name=WP_240365822.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195895.1;locus_tag=PKHYL_RS01615;product=c-type cytochrome;protein_id=WP_240365822.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	313238	314308	.	+	.	ID=gene-PKHYL_RS01620;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=PKHYL_RS01620;old_locus_tag=PKHYL_03760
NZ_AP019516.1	Protein Homology	CDS	313238	314308	.	+	0	ID=cds-WP_240365823.1;Parent=gene-PKHYL_RS01620;Dbxref=Genbank:WP_240365823.1;Name=WP_240365823.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672601.1;locus_tag=PKHYL_RS01620;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_240365823.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	314341	314712	.	+	.	ID=gene-PKHYL_RS01625;Name=PKHYL_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01625;old_locus_tag=PKHYL_03770
NZ_AP019516.1	Protein Homology	CDS	314341	314712	.	+	0	ID=cds-WP_240365824.1;Parent=gene-PKHYL_RS01625;Dbxref=Genbank:WP_240365824.1;Name=WP_240365824.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442595.1;locus_tag=PKHYL_RS01625;product=CrcB family protein;protein_id=WP_240365824.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	314977	315600	.	+	.	ID=gene-PKHYL_RS01630;Name=PKHYL_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01630;old_locus_tag=PKHYL_03780
NZ_AP019516.1	Protein Homology	CDS	314977	315600	.	+	0	ID=cds-WP_240365825.1;Parent=gene-PKHYL_RS01630;Dbxref=Genbank:WP_240365825.1;Name=WP_240365825.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024565.2;locus_tag=PKHYL_RS01630;product=AAA family ATPase;protein_id=WP_240365825.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	315590	316042	.	-	.	ID=gene-PKHYL_RS01635;Name=PKHYL_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01635;old_locus_tag=PKHYL_03790
NZ_AP019516.1	Protein Homology	CDS	315590	316042	.	-	0	ID=cds-WP_240365373.1;Parent=gene-PKHYL_RS01635;Dbxref=Genbank:WP_240365373.1;Name=WP_240365373.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF024752.2;locus_tag=PKHYL_RS01635;product=transposase;protein_id=WP_240365373.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	316002	316421	.	-	.	ID=gene-PKHYL_RS01640;Name=PKHYL_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01640;old_locus_tag=PKHYL_03800
NZ_AP019516.1	Protein Homology	CDS	316002	316421	.	-	0	ID=cds-WP_240365372.1;Parent=gene-PKHYL_RS01640;Dbxref=Genbank:WP_240365372.1;Name=WP_240365372.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025000.2;locus_tag=PKHYL_RS01640;product=transposase family protein;protein_id=WP_240365372.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	316415	318109	.	+	.	ID=gene-PKHYL_RS01645;Name=PKHYL_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01645;old_locus_tag=PKHYL_03810
NZ_AP019516.1	Protein Homology	CDS	316415	318109	.	+	0	ID=cds-WP_240365826.1;Parent=gene-PKHYL_RS01645;Dbxref=Genbank:WP_240365826.1;Name=WP_240365826.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024565.2;locus_tag=PKHYL_RS01645;product=AAA family ATPase;protein_id=WP_240365826.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	318123	319039	.	-	.	ID=gene-PKHYL_RS01650;Name=PKHYL_RS01650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01650;old_locus_tag=PKHYL_03820;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	318123	319039	.	-	0	ID=cds-PKHYL_RS01650;Parent=gene-PKHYL_RS01650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279527.1;locus_tag=PKHYL_RS01650;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	319131	319919	.	-	.	ID=gene-PKHYL_RS01655;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=PKHYL_RS01655;old_locus_tag=PKHYL_03830
NZ_AP019516.1	Protein Homology	CDS	319131	319919	.	-	0	ID=cds-WP_240365827.1;Parent=gene-PKHYL_RS01655;Dbxref=Genbank:WP_240365827.1;Name=WP_240365827.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195885.1;locus_tag=PKHYL_RS01655;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_240365827.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	319919	320521	.	-	.	ID=gene-PKHYL_RS01660;Name=PKHYL_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01660;old_locus_tag=PKHYL_03840
NZ_AP019516.1	Protein Homology	CDS	319919	320521	.	-	0	ID=cds-WP_240365828.1;Parent=gene-PKHYL_RS01660;Dbxref=Genbank:WP_240365828.1;Name=WP_240365828.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012738.2;locus_tag=PKHYL_RS01660;product=ABC transporter permease subunit;protein_id=WP_240365828.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	320467	320796	.	-	.	ID=gene-PKHYL_RS01665;Name=PKHYL_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01665;old_locus_tag=PKHYL_03850
NZ_AP019516.1	GeneMarkS-2+	CDS	320467	320796	.	-	0	ID=cds-WP_240365829.1;Parent=gene-PKHYL_RS01665;Dbxref=Genbank:WP_240365829.1;Name=WP_240365829.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01665;product=hypothetical protein;protein_id=WP_240365829.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	320796	322037	.	-	.	ID=gene-PKHYL_RS01670;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=PKHYL_RS01670;old_locus_tag=PKHYL_03860
NZ_AP019516.1	Protein Homology	CDS	320796	322037	.	-	0	ID=cds-WP_093067429.1;Parent=gene-PKHYL_RS01670;Dbxref=Genbank:WP_093067429.1;Name=WP_093067429.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195880.1;locus_tag=PKHYL_RS01670;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_093067429.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	322469	323107	.	+	.	ID=gene-PKHYL_RS01675;Name=PKHYL_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01675;old_locus_tag=PKHYL_03870
NZ_AP019516.1	Protein Homology	CDS	322469	323107	.	+	0	ID=cds-WP_093067434.1;Parent=gene-PKHYL_RS01675;Dbxref=Genbank:WP_093067434.1;Name=WP_093067434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512612.1;locus_tag=PKHYL_RS01675;product=carbonic anhydrase;protein_id=WP_093067434.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	323259	323819	.	+	.	ID=gene-PKHYL_RS01680;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=PKHYL_RS01680;old_locus_tag=PKHYL_03880
NZ_AP019516.1	Protein Homology	CDS	323259	323819	.	+	0	ID=cds-WP_240365830.1;Parent=gene-PKHYL_RS01680;Dbxref=Genbank:WP_240365830.1;Name=WP_240365830.1;Ontology_term=GO:0005975,GO:0051596,GO:0004462;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||IEA;go_process=carbohydrate metabolic process|0005975||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442601.1;locus_tag=PKHYL_RS01680;product=lactoylglutathione lyase;protein_id=WP_240365830.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	324102	324764	.	+	.	ID=gene-PKHYL_RS01685;Name=PKHYL_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01685;old_locus_tag=PKHYL_03890
NZ_AP019516.1	Protein Homology	CDS	324102	324764	.	+	0	ID=cds-WP_240365831.1;Parent=gene-PKHYL_RS01685;Dbxref=Genbank:WP_240365831.1;Name=WP_240365831.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013117.2;locus_tag=PKHYL_RS01685;product=mechanosensitive ion channel;protein_id=WP_240365831.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	325151	325624	.	-	.	ID=gene-PKHYL_RS01690;Name=PKHYL_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01690;old_locus_tag=PKHYL_03900
NZ_AP019516.1	Protein Homology	CDS	325151	325624	.	-	0	ID=cds-WP_093067440.1;Parent=gene-PKHYL_RS01690;Dbxref=Genbank:WP_093067440.1;Name=WP_093067440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512614.1;locus_tag=PKHYL_RS01690;product=cytochrome c;protein_id=WP_093067440.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	325915	326913	.	-	.	ID=gene-PKHYL_RS01695;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=PKHYL_RS01695;old_locus_tag=PKHYL_03910
NZ_AP019516.1	Protein Homology	CDS	325915	326913	.	-	0	ID=cds-WP_093067444.1;Parent=gene-PKHYL_RS01695;Dbxref=Genbank:WP_093067444.1;Name=WP_093067444.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512615.1;locus_tag=PKHYL_RS01695;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_093067444.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	326921	327592	.	-	.	ID=gene-PKHYL_RS01700;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=PKHYL_RS01700;old_locus_tag=PKHYL_03920
NZ_AP019516.1	Protein Homology	CDS	326921	327592	.	-	0	ID=cds-WP_093067447.1;Parent=gene-PKHYL_RS01700;Dbxref=Genbank:WP_093067447.1;Name=WP_093067447.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512616.1;locus_tag=PKHYL_RS01700;product=GTP cyclohydrolase II;protein_id=WP_093067447.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	328121	330177	.	+	.	ID=gene-PKHYL_RS01705;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=pseudogene;locus_tag=PKHYL_RS01705;old_locus_tag=PKHYL_03940;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	328121	330177	.	+	0	ID=cds-PKHYL_RS01705;Parent=gene-PKHYL_RS01705;Note=frameshifted;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512617.1;locus_tag=PKHYL_RS01705;product=1-deoxy-D-xylulose-5-phosphate synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	330531	331359	.	+	.	ID=gene-PKHYL_RS01710;Name=PKHYL_RS01710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01710;old_locus_tag=PKHYL_03950;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	330531	331359	.	+	0	ID=cds-PKHYL_RS01710;Parent=gene-PKHYL_RS01710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279533.1;locus_tag=PKHYL_RS01710;product=inositol monophosphatase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	331377	332842	.	-	.	ID=gene-PKHYL_RS01715;Name=PKHYL_RS01715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01715;old_locus_tag=PKHYL_03960;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	331377	332842	.	-	0	ID=cds-PKHYL_RS01715;Parent=gene-PKHYL_RS01715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512619.1;locus_tag=PKHYL_RS01715;product=wax ester/triacylglycerol synthase family O-acyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	332963	333746	.	-	.	ID=gene-PKHYL_RS01720;Name=PKHYL_RS01720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01720;old_locus_tag=PKHYL_03980;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	332963	333746	.	-	0	ID=cds-PKHYL_RS01720;Parent=gene-PKHYL_RS01720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996028.1;locus_tag=PKHYL_RS01720;product=thiazole synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	334131	334328	.	+	.	ID=gene-PKHYL_RS01725;Name=PKHYL_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01725;old_locus_tag=PKHYL_04000
NZ_AP019516.1	GeneMarkS-2+	CDS	334131	334328	.	+	0	ID=cds-WP_240365832.1;Parent=gene-PKHYL_RS01725;Dbxref=Genbank:WP_240365832.1;Name=WP_240365832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01725;product=hypothetical protein;protein_id=WP_240365832.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	334336	335686	.	+	.	ID=gene-PKHYL_RS01730;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=pseudogene;locus_tag=PKHYL_RS01730;old_locus_tag=PKHYL_04010;partial=true;pseudo=true;start_range=.,334336
NZ_AP019516.1	Protein Homology	CDS	334336	335686	.	+	0	ID=cds-PKHYL_RS01730;Parent=gene-PKHYL_RS01730;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512621.1;locus_tag=PKHYL_RS01730;partial=true;product=type II secretion system ATPase GspE;pseudo=true;start_range=.,334336;transl_table=11
NZ_AP019516.1	RefSeq	gene	335831	336178	.	-	.	ID=gene-PKHYL_RS01735;Name=PKHYL_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01735;old_locus_tag=PKHYL_04030
NZ_AP019516.1	Protein Homology	CDS	335831	336178	.	-	0	ID=cds-WP_240365833.1;Parent=gene-PKHYL_RS01735;Dbxref=Genbank:WP_240365833.1;Name=WP_240365833.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013228.2;locus_tag=PKHYL_RS01735;product=RidA family protein;protein_id=WP_240365833.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	336395	337173	.	-	.	ID=gene-PKHYL_RS01740;Name=PKHYL_RS01740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01740;old_locus_tag=PKHYL_04050;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	336395	337173	.	-	0	ID=cds-PKHYL_RS01740;Parent=gene-PKHYL_RS01740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512623.1;locus_tag=PKHYL_RS01740;product=DUF4442 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	337433	338104	.	+	.	ID=gene-PKHYL_RS01745;Name=PKHYL_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01745;old_locus_tag=PKHYL_04060
NZ_AP019516.1	GeneMarkS-2+	CDS	337433	338104	.	+	0	ID=cds-WP_240365834.1;Parent=gene-PKHYL_RS01745;Dbxref=Genbank:WP_240365834.1;Name=WP_240365834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01745;product=hypothetical protein;protein_id=WP_240365834.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	338149	338895	.	+	.	ID=gene-PKHYL_RS01750;Name=PKHYL_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01750;old_locus_tag=PKHYL_04070
NZ_AP019516.1	Protein Homology	CDS	338149	338895	.	+	0	ID=cds-WP_240365835.1;Parent=gene-PKHYL_RS01750;Dbxref=Genbank:WP_240365835.1;Name=WP_240365835.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF019348.2;locus_tag=PKHYL_RS01750;product=AAA family ATPase;protein_id=WP_240365835.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	338908	339177	.	+	.	ID=gene-PKHYL_RS01755;Name=PKHYL_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01755;old_locus_tag=PKHYL_04080
NZ_AP019516.1	GeneMarkS-2+	CDS	338908	339177	.	+	0	ID=cds-WP_240365836.1;Parent=gene-PKHYL_RS01755;Dbxref=Genbank:WP_240365836.1;Name=WP_240365836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01755;product=hypothetical protein;protein_id=WP_240365836.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	339162	340028	.	+	.	ID=gene-PKHYL_RS01760;Name=PKHYL_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01760;old_locus_tag=PKHYL_04090
NZ_AP019516.1	Protein Homology	CDS	339162	340028	.	+	0	ID=cds-WP_269778214.1;Parent=gene-PKHYL_RS01760;Dbxref=Genbank:WP_269778214.1;Name=WP_269778214.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021622.2;locus_tag=PKHYL_RS01760;product=hypothetical protein;protein_id=WP_269778214.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	340022	340438	.	+	.	ID=gene-PKHYL_RS17015;Name=PKHYL_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17015;old_locus_tag=PKHYL_04100
NZ_AP019516.1	Protein Homology	CDS	340022	340438	.	+	0	ID=cds-WP_269778215.1;Parent=gene-PKHYL_RS17015;Dbxref=Genbank:WP_269778215.1;Name=WP_269778215.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021622.2;locus_tag=PKHYL_RS17015;product=hypothetical protein;protein_id=WP_269778215.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	340670	340746	.	+	.	ID=gene-PKHYL_RS01765;Name=PKHYL_RS01765;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS01765;old_locus_tag=PKHYL_t00070
NZ_AP019516.1	tRNAscan-SE	tRNA	340670	340746	.	+	.	ID=rna-PKHYL_RS01765;Parent=gene-PKHYL_RS01765;anticodon=(pos:340704..340706);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS01765;product=tRNA-Pro
NZ_AP019516.1	tRNAscan-SE	exon	340670	340746	.	+	.	ID=exon-PKHYL_RS01765-1;Parent=rna-PKHYL_RS01765;anticodon=(pos:340704..340706);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS01765;product=tRNA-Pro
NZ_AP019516.1	RefSeq	gene	340856	340933	.	+	.	ID=gene-PKHYL_RS01770;Name=PKHYL_RS01770;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS01770;old_locus_tag=PKHYL_t00080
NZ_AP019516.1	tRNAscan-SE	tRNA	340856	340933	.	+	.	ID=rna-PKHYL_RS01770;Parent=gene-PKHYL_RS01770;anticodon=(pos:340891..340893);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS01770;product=tRNA-Arg
NZ_AP019516.1	tRNAscan-SE	exon	340856	340933	.	+	.	ID=exon-PKHYL_RS01770-1;Parent=rna-PKHYL_RS01770;anticodon=(pos:340891..340893);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS01770;product=tRNA-Arg
NZ_AP019516.1	RefSeq	gene	340976	341051	.	+	.	ID=gene-PKHYL_RS01775;Name=PKHYL_RS01775;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS01775;old_locus_tag=PKHYL_t00090
NZ_AP019516.1	tRNAscan-SE	tRNA	340976	341051	.	+	.	ID=rna-PKHYL_RS01775;Parent=gene-PKHYL_RS01775;anticodon=(pos:341009..341011);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS01775;product=tRNA-His
NZ_AP019516.1	tRNAscan-SE	exon	340976	341051	.	+	.	ID=exon-PKHYL_RS01775-1;Parent=rna-PKHYL_RS01775;anticodon=(pos:341009..341011);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS01775;product=tRNA-His
NZ_AP019516.1	RefSeq	gene	341627	342418	.	+	.	ID=gene-PKHYL_RS01780;Name=PKHYL_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01780;old_locus_tag=PKHYL_04110
NZ_AP019516.1	Protein Homology	CDS	341627	342418	.	+	0	ID=cds-WP_240366476.1;Parent=gene-PKHYL_RS01780;Dbxref=Genbank:WP_240366476.1;Name=WP_240366476.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024260.2;locus_tag=PKHYL_RS01780;product=AraC family transcriptional regulator;protein_id=WP_240366476.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	342817	343764	.	+	.	ID=gene-PKHYL_RS01785;Name=PKHYL_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01785;old_locus_tag=PKHYL_04120
NZ_AP019516.1	Protein Homology	CDS	342817	343764	.	+	0	ID=cds-WP_240365837.1;Parent=gene-PKHYL_RS01785;Dbxref=Genbank:WP_240365837.1;Name=WP_240365837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395720.1;locus_tag=PKHYL_RS01785;product=hypothetical protein;protein_id=WP_240365837.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	343993	345196	.	+	.	ID=gene-PKHYL_RS01790;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=pseudogene;locus_tag=PKHYL_RS01790;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	343993	345196	.	+	0	ID=cds-PKHYL_RS01790;Parent=gene-PKHYL_RS01790;Note=frameshifted;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442616.1;locus_tag=PKHYL_RS01790;product=type II secretion system inner membrane protein GspF;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	345779	346219	.	+	.	ID=gene-PKHYL_RS01795;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=PKHYL_RS01795;old_locus_tag=PKHYL_04150
NZ_AP019516.1	Protein Homology	CDS	345779	346219	.	+	0	ID=cds-WP_058025683.1;Parent=gene-PKHYL_RS01795;Dbxref=Genbank:WP_058025683.1;Name=WP_058025683.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009767595.1;locus_tag=PKHYL_RS01795;product=type II secretion system major pseudopilin GspG;protein_id=WP_058025683.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	346461	347027	.	+	.	ID=gene-PKHYL_RS01800;Name=PKHYL_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01800;old_locus_tag=PKHYL_04170
NZ_AP019516.1	Protein Homology	CDS	346461	347027	.	+	0	ID=cds-WP_071002393.1;Parent=gene-PKHYL_RS01800;Dbxref=Genbank:WP_071002393.1;Name=WP_071002393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442618.1;locus_tag=PKHYL_RS01800;product=protein-disulfide reductase DsbD N-terminal domain-containing protein;protein_id=WP_071002393.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	347081	347515	.	+	.	ID=gene-PKHYL_RS01805;Name=PKHYL_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01805;old_locus_tag=PKHYL_04180
NZ_AP019516.1	Protein Homology	CDS	347081	347515	.	+	0	ID=cds-WP_269778216.1;Parent=gene-PKHYL_RS01805;Dbxref=Genbank:WP_269778216.1;Name=WP_269778216.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022853.2;locus_tag=PKHYL_RS01805;product=protein-disulfide reductase DsbD family protein;protein_id=WP_269778216.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	347476	347721	.	+	.	ID=gene-PKHYL_RS17020;Name=PKHYL_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17020;old_locus_tag=PKHYL_04190
NZ_AP019516.1	Protein Homology	CDS	347476	347721	.	+	0	ID=cds-WP_269778217.1;Parent=gene-PKHYL_RS17020;Dbxref=Genbank:WP_269778217.1;Name=WP_269778217.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022853.2;locus_tag=PKHYL_RS17020;product=protein-disulfide reductase DsbD family protein;protein_id=WP_269778217.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	347690	348385	.	+	.	ID=gene-PKHYL_RS01810;Name=PKHYL_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01810;old_locus_tag=PKHYL_04200
NZ_AP019516.1	Protein Homology	CDS	347690	348385	.	+	0	ID=cds-WP_240365838.1;Parent=gene-PKHYL_RS01810;Dbxref=Genbank:WP_240365838.1;Name=WP_240365838.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024778.2;locus_tag=PKHYL_RS01810;product=sulfite exporter TauE/SafE family protein;protein_id=WP_240365838.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	348382	349239	.	+	.	ID=gene-PKHYL_RS01815;Name=PKHYL_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01815;old_locus_tag=PKHYL_04210
NZ_AP019516.1	Protein Homology	CDS	348382	349239	.	+	0	ID=cds-WP_240365839.1;Parent=gene-PKHYL_RS01815;Dbxref=Genbank:WP_240365839.1;Name=WP_240365839.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012314.2;locus_tag=PKHYL_RS01815;product=thioredoxin domain-containing protein;protein_id=WP_240365839.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	349607	351019	.	+	.	ID=gene-PKHYL_RS01820;Name=PKHYL_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01820;old_locus_tag=PKHYL_04220
NZ_AP019516.1	Protein Homology	CDS	349607	351019	.	+	0	ID=cds-WP_240365840.1;Parent=gene-PKHYL_RS01820;Dbxref=Genbank:WP_240365840.1;Name=WP_240365840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195826.1;locus_tag=PKHYL_RS01820;product=phospholipase A;protein_id=WP_240365840.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	351072	351896	.	+	.	ID=gene-PKHYL_RS01825;Name=PKHYL_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01825;old_locus_tag=PKHYL_04230
NZ_AP019516.1	Protein Homology	CDS	351072	351896	.	+	0	ID=cds-WP_240365841.1;Parent=gene-PKHYL_RS01825;Dbxref=Genbank:WP_240365841.1;Name=WP_240365841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442621.1;locus_tag=PKHYL_RS01825;product=ComF family protein;protein_id=WP_240365841.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	352164	352661	.	+	.	ID=gene-PKHYL_RS01830;Name=PKHYL_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01830;old_locus_tag=PKHYL_04250
NZ_AP019516.1	Protein Homology	CDS	352164	352661	.	+	0	ID=cds-WP_227674181.1;Parent=gene-PKHYL_RS01830;Dbxref=Genbank:WP_227674181.1;Name=WP_227674181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195819.1;locus_tag=PKHYL_RS01830;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_227674181.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	352661	352810	.	+	.	ID=gene-PKHYL_RS01835;Name=PKHYL_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01835
NZ_AP019516.1	Protein Homology	CDS	352661	352810	.	+	0	ID=cds-WP_240365842.1;Parent=gene-PKHYL_RS01835;Dbxref=Genbank:WP_240365842.1;Name=WP_240365842.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019575.2;locus_tag=PKHYL_RS01835;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_240365842.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	352935	353225	.	+	.	ID=gene-PKHYL_RS01840;Name=PKHYL_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01840;old_locus_tag=PKHYL_04260
NZ_AP019516.1	GeneMarkS-2+	CDS	352935	353225	.	+	0	ID=cds-WP_240365843.1;Parent=gene-PKHYL_RS01840;Dbxref=Genbank:WP_240365843.1;Name=WP_240365843.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01840;product=hypothetical protein;protein_id=WP_240365843.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	353225	353782	.	+	.	ID=gene-PKHYL_RS01845;Name=PKHYL_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01845;old_locus_tag=PKHYL_04270
NZ_AP019516.1	Protein Homology	CDS	353225	353782	.	+	0	ID=cds-WP_240365844.1;Parent=gene-PKHYL_RS01845;Dbxref=Genbank:WP_240365844.1;Name=WP_240365844.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019575.2;locus_tag=PKHYL_RS01845;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_240365844.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	353734	354204	.	+	.	ID=gene-PKHYL_RS01850;Name=PKHYL_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01850;old_locus_tag=PKHYL_04280
NZ_AP019516.1	Protein Homology	CDS	353734	354204	.	+	0	ID=cds-WP_240365845.1;Parent=gene-PKHYL_RS01850;Dbxref=Genbank:WP_240365845.1;Name=WP_240365845.1;Ontology_term=GO:0043683;gbkey=CDS;go_process=type IV pilus assembly|0043683||IEA;inference=COORDINATES: protein motif:HMM:NF027400.2;locus_tag=PKHYL_RS01850;product=PilW family protein;protein_id=WP_240365845.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	354462	354935	.	+	.	ID=gene-PKHYL_RS01855;Name=PKHYL_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01855;old_locus_tag=PKHYL_04300
NZ_AP019516.1	GeneMarkS-2+	CDS	354462	354935	.	+	0	ID=cds-WP_240365846.1;Parent=gene-PKHYL_RS01855;Dbxref=Genbank:WP_240365846.1;Name=WP_240365846.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01855;product=hypothetical protein;protein_id=WP_240365846.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	354965	355099	.	+	.	ID=gene-PKHYL_RS17025;Name=PKHYL_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17025
NZ_AP019516.1	GeneMarkS-2+	CDS	354965	355099	.	+	0	ID=cds-WP_269778218.1;Parent=gene-PKHYL_RS17025;Dbxref=Genbank:WP_269778218.1;Name=WP_269778218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17025;product=hypothetical protein;protein_id=WP_269778218.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	355132	355998	.	+	.	ID=gene-PKHYL_RS01860;Name=PKHYL_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01860;old_locus_tag=PKHYL_04310
NZ_AP019516.1	GeneMarkS-2+	CDS	355132	355998	.	+	0	ID=cds-WP_240365847.1;Parent=gene-PKHYL_RS01860;Dbxref=Genbank:WP_240365847.1;Name=WP_240365847.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01860;product=hypothetical protein;protein_id=WP_240365847.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	356403	359276	.	+	.	ID=gene-PKHYL_RS01865;Name=PKHYL_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01865;old_locus_tag=PKHYL_04320
NZ_AP019516.1	GeneMarkS-2+	CDS	356403	359276	.	+	0	ID=cds-WP_240365848.1;Parent=gene-PKHYL_RS01865;Dbxref=Genbank:WP_240365848.1;Name=WP_240365848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01865;product=pilus assembly protein PilY;protein_id=WP_240365848.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	359289	359840	.	+	.	ID=gene-PKHYL_RS01870;Name=PKHYL_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01870;old_locus_tag=PKHYL_04330
NZ_AP019516.1	Protein Homology	CDS	359289	359840	.	+	0	ID=cds-WP_240365849.1;Parent=gene-PKHYL_RS01870;Dbxref=Genbank:WP_240365849.1;Name=WP_240365849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195811.1;locus_tag=PKHYL_RS01870;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_240365849.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	359840	360283	.	+	.	ID=gene-PKHYL_RS01875;Name=PKHYL_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01875;old_locus_tag=PKHYL_04340
NZ_AP019516.1	Protein Homology	CDS	359840	360283	.	+	0	ID=cds-WP_240365850.1;Parent=gene-PKHYL_RS01875;Dbxref=Genbank:WP_240365850.1;Name=WP_240365850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195809.1;locus_tag=PKHYL_RS01875;product=type IV pilin protein;protein_id=WP_240365850.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	360647	360772	.	+	.	ID=gene-PKHYL_RS01880;Name=PKHYL_RS01880;end_range=360772,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01880;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	360647	360772	.	+	0	ID=cds-PKHYL_RS01880;Parent=gene-PKHYL_RS01880;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=360772,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010980743.1;locus_tag=PKHYL_RS01880;partial=true;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	360806	361099	.	+	.	ID=gene-PKHYL_RS01885;Name=PKHYL_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01885
NZ_AP019516.1	Protein Homology	CDS	360806	361099	.	+	0	ID=cds-WP_240366477.1;Parent=gene-PKHYL_RS01885;Dbxref=Genbank:WP_240366477.1;Name=WP_240366477.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012342.2;locus_tag=PKHYL_RS01885;product=pilin;protein_id=WP_240366477.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	361190	361384	.	+	.	ID=gene-PKHYL_RS17030;Name=PKHYL_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17030;old_locus_tag=PKHYL_04360
NZ_AP019516.1	Protein Homology	CDS	361190	361384	.	+	0	ID=cds-WP_269778219.1;Parent=gene-PKHYL_RS17030;Dbxref=Genbank:WP_269778219.1;Name=WP_269778219.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019575.2;locus_tag=PKHYL_RS17030;product=pilin;protein_id=WP_269778219.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	361356	361640	.	+	.	ID=gene-PKHYL_RS01895;Name=PKHYL_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01895;old_locus_tag=PKHYL_04370
NZ_AP019516.1	Protein Homology	CDS	361356	361640	.	+	0	ID=cds-WP_240365851.1;Parent=gene-PKHYL_RS01895;Dbxref=Genbank:WP_240365851.1;Name=WP_240365851.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012342.2;locus_tag=PKHYL_RS01895;product=pilin;protein_id=WP_240365851.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	361800	362456	.	+	.	ID=gene-PKHYL_RS01900;Name=tfpZ;gbkey=Gene;gene=tfpZ;gene_biotype=protein_coding;locus_tag=PKHYL_RS01900;old_locus_tag=PKHYL_04380
NZ_AP019516.1	Protein Homology	CDS	361800	362456	.	+	0	ID=cds-WP_240365852.1;Parent=gene-PKHYL_RS01900;Dbxref=Genbank:WP_240365852.1;Name=WP_240365852.1;gbkey=CDS;gene=tfpZ;inference=COORDINATES: protein motif:HMM:NF041437.1;locus_tag=PKHYL_RS01900;product=TfpX/TfpZ family type IV pilin accessory protein;protein_id=WP_240365852.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	362542	362865	.	-	.	ID=gene-PKHYL_RS01905;Name=PKHYL_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01905;old_locus_tag=PKHYL_04390
NZ_AP019516.1	Protein Homology	CDS	362542	362865	.	-	0	ID=cds-WP_011279554.1;Parent=gene-PKHYL_RS01905;Dbxref=Genbank:WP_011279554.1;Name=WP_011279554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016138692.1;locus_tag=PKHYL_RS01905;product=ferredoxin family protein;protein_id=WP_011279554.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	362963	366048	.	-	.	ID=gene-PKHYL_RS01910;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=pseudogene;locus_tag=PKHYL_RS01910;old_locus_tag=PKHYL_04400;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	362963	366048	.	-	0	ID=cds-PKHYL_RS01910;Parent=gene-PKHYL_RS01910;Note=frameshifted;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512645.1;locus_tag=PKHYL_RS01910;product=DNA mismatch repair protein MutS;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	366508	369299	.	+	.	ID=gene-PKHYL_RS01915;Name=secA;gbkey=Gene;gene=secA;gene_biotype=pseudogene;locus_tag=PKHYL_RS01915;old_locus_tag=PKHYL_04430;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	366508	369299	.	+	0	ID=cds-PKHYL_RS01915;Parent=gene-PKHYL_RS01915;Note=frameshifted;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442631.1;locus_tag=PKHYL_RS01915;product=preprotein translocase subunit SecA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	369518	370060	.	+	.	ID=gene-PKHYL_RS01920;Name=PKHYL_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01920;old_locus_tag=PKHYL_04440
NZ_AP019516.1	Protein Homology	CDS	369518	370060	.	+	0	ID=cds-WP_240365853.1;Parent=gene-PKHYL_RS01920;Dbxref=Genbank:WP_240365853.1;Name=WP_240365853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442632.1;locus_tag=PKHYL_RS01920;product=hypothetical protein;protein_id=WP_240365853.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	370167	370733	.	-	.	ID=gene-PKHYL_RS01925;Name=PKHYL_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01925;old_locus_tag=PKHYL_04450
NZ_AP019516.1	Protein Homology	CDS	370167	370733	.	-	0	ID=cds-WP_240365854.1;Parent=gene-PKHYL_RS01925;Dbxref=Genbank:WP_240365854.1;Name=WP_240365854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442633.1;locus_tag=PKHYL_RS01925;product=DUF2382 domain-containing protein;protein_id=WP_240365854.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	370976	371824	.	-	.	ID=gene-PKHYL_RS01930;Name=PKHYL_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01930;old_locus_tag=PKHYL_04460
NZ_AP019516.1	Protein Homology	CDS	370976	371824	.	-	0	ID=cds-WP_240365855.1;Parent=gene-PKHYL_RS01930;Dbxref=Genbank:WP_240365855.1;Name=WP_240365855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195780.1;locus_tag=PKHYL_RS01930;product=PRC and DUF2382 domain-containing protein;protein_id=WP_240365855.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	372281	373460	.	-	.	ID=gene-PKHYL_RS01935;Name=PKHYL_RS01935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01935;old_locus_tag=PKHYL_04480;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	372281	373460	.	-	0	ID=cds-PKHYL_RS01935;Parent=gene-PKHYL_RS01935;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395699.1;locus_tag=PKHYL_RS01935;product=thiolase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	373609	374967	.	-	.	ID=gene-PKHYL_RS01940;Name=PKHYL_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01940;old_locus_tag=PKHYL_04490
NZ_AP019516.1	Protein Homology	CDS	373609	374967	.	-	0	ID=cds-WP_240365856.1;Parent=gene-PKHYL_RS01940;Dbxref=Genbank:WP_240365856.1;Name=WP_240365856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442636.1;locus_tag=PKHYL_RS01940;product=homoserine dehydrogenase;protein_id=WP_240365856.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	375354	375473	.	-	.	ID=gene-PKHYL_RS17035;Name=PKHYL_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17035;old_locus_tag=PKHYL_04500
NZ_AP019516.1	Protein Homology	CDS	375354	375473	.	-	0	ID=cds-WP_269778220.1;Parent=gene-PKHYL_RS17035;Dbxref=Genbank:WP_269778220.1;Name=WP_269778220.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024498.2;locus_tag=PKHYL_RS17035;product=thioredoxin fold domain-containing protein;protein_id=WP_269778220.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	375464	376207	.	-	.	ID=gene-PKHYL_RS17040;Name=PKHYL_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17040;old_locus_tag=PKHYL_04510
NZ_AP019516.1	Protein Homology	CDS	375464	376207	.	-	0	ID=cds-WP_269778221.1;Parent=gene-PKHYL_RS17040;Dbxref=Genbank:WP_269778221.1;Name=WP_269778221.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024498.2;locus_tag=PKHYL_RS17040;product=thioredoxin fold domain-containing protein;protein_id=WP_269778221.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	376627	377555	.	+	.	ID=gene-PKHYL_RS01950;Name=PKHYL_RS01950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01950;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	376627	377555	.	+	0	ID=cds-PKHYL_RS01950;Parent=gene-PKHYL_RS01950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195774.1;locus_tag=PKHYL_RS01950;product=DUF808 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	377682	378773	.	-	.	ID=gene-PKHYL_RS01955;Name=PKHYL_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01955;old_locus_tag=PKHYL_04540
NZ_AP019516.1	GeneMarkS-2+	CDS	377682	378773	.	-	0	ID=cds-WP_240365857.1;Parent=gene-PKHYL_RS01955;Dbxref=Genbank:WP_240365857.1;Name=WP_240365857.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01955;product=hypothetical protein;protein_id=WP_240365857.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	378770	379045	.	-	.	ID=gene-PKHYL_RS01960;Name=PKHYL_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01960;old_locus_tag=PKHYL_04550
NZ_AP019516.1	GeneMarkS-2+	CDS	378770	379045	.	-	0	ID=cds-WP_240365858.1;Parent=gene-PKHYL_RS01960;Dbxref=Genbank:WP_240365858.1;Name=WP_240365858.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01960;product=hypothetical protein;protein_id=WP_240365858.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	379425	381880	.	-	.	ID=gene-PKHYL_RS01965;Name=PKHYL_RS01965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01965;partial=true;pseudo=true;start_range=.,379425
NZ_AP019516.1	Protein Homology	CDS	379425	381880	.	-	0	ID=cds-PKHYL_RS01965;Parent=gene-PKHYL_RS01965;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006401,GO:0004540;gbkey=CDS;go_function=ribonuclease activity|0004540||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003674271.1;locus_tag=PKHYL_RS01965;partial=true;product=Rne/Rng family ribonuclease;pseudo=true;start_range=.,379425;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	383080	384090	.	+	.	ID=gene-PKHYL_RS01970;Name=PKHYL_RS01970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS01970;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	383080	384090	.	+	0	ID=cds-PKHYL_RS01970;Parent=gene-PKHYL_RS01970;Note=frameshifted;Ontology_term=GO:0001522,GO:0009451,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010195770.1;locus_tag=PKHYL_RS01970;product=RluA family pseudouridine synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	384230	384667	.	+	.	ID=gene-PKHYL_RS17045;Name=PKHYL_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17045;old_locus_tag=PKHYL_04610
NZ_AP019516.1	Protein Homology	CDS	384230	384667	.	+	0	ID=cds-WP_269778222.1;Parent=gene-PKHYL_RS17045;Dbxref=Genbank:WP_269778222.1;Name=WP_269778222.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024811.2;locus_tag=PKHYL_RS17045;product=HAD hydrolase-like protein;protein_id=WP_269778222.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	384654	384944	.	+	.	ID=gene-PKHYL_RS17050;Name=PKHYL_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17050;old_locus_tag=PKHYL_04620
NZ_AP019516.1	Protein Homology	CDS	384654	384944	.	+	0	ID=cds-WP_269778223.1;Parent=gene-PKHYL_RS17050;Dbxref=Genbank:WP_269778223.1;Name=WP_269778223.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: protein motif:HMM:NF024811.2;locus_tag=PKHYL_RS17050;product=HAD-IA family hydrolase;protein_id=WP_269778223.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	385028	385794	.	-	.	ID=gene-PKHYL_RS01980;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=pseudogene;locus_tag=PKHYL_RS01980;old_locus_tag=PKHYL_04630;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	385028	385794	.	-	0	ID=cds-PKHYL_RS01980;Parent=gene-PKHYL_RS01980;Note=frameshifted;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512657.1;locus_tag=PKHYL_RS01980;product=ribosome biogenesis GTP-binding protein YihA/YsxC;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	386465	386719	.	+	.	ID=gene-PKHYL_RS01985;Name=PKHYL_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01985;old_locus_tag=PKHYL_04640
NZ_AP019516.1	GeneMarkS-2+	CDS	386465	386719	.	+	0	ID=cds-WP_240365859.1;Parent=gene-PKHYL_RS01985;Dbxref=Genbank:WP_240365859.1;Name=WP_240365859.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS01985;product=cytochrome c5 family protein;protein_id=WP_240365859.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	387119	387790	.	+	.	ID=gene-PKHYL_RS01990;Name=PKHYL_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01990
NZ_AP019516.1	Protein Homology	CDS	387119	387790	.	+	0	ID=cds-WP_240366478.1;Parent=gene-PKHYL_RS01990;Dbxref=Genbank:WP_240366478.1;Name=WP_240366478.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279569.1;locus_tag=PKHYL_RS01990;product=c-type cytochrome;protein_id=WP_240366478.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	388100	389230	.	+	.	ID=gene-PKHYL_RS01995;Name=PKHYL_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS01995;old_locus_tag=PKHYL_04660
NZ_AP019516.1	Protein Homology	CDS	388100	389230	.	+	0	ID=cds-WP_240365860.1;Parent=gene-PKHYL_RS01995;Dbxref=Genbank:WP_240365860.1;Name=WP_240365860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442644.1;locus_tag=PKHYL_RS01995;product=hypothetical protein;protein_id=WP_240365860.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	389206	389583	.	+	.	ID=gene-PKHYL_RS02000;Name=PKHYL_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02000;old_locus_tag=PKHYL_04670
NZ_AP019516.1	Protein Homology	CDS	389206	389583	.	+	0	ID=cds-WP_240365861.1;Parent=gene-PKHYL_RS02000;Dbxref=Genbank:WP_240365861.1;Name=WP_240365861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512661.1;locus_tag=PKHYL_RS02000;product=RnfH family protein;protein_id=WP_240365861.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	389634	390053	.	-	.	ID=gene-PKHYL_RS02005;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=PKHYL_RS02005;old_locus_tag=PKHYL_04680
NZ_AP019516.1	Protein Homology	CDS	389634	390053	.	-	0	ID=cds-WP_058024230.1;Parent=gene-PKHYL_RS02005;Dbxref=Genbank:WP_058024230.1;Name=WP_058024230.1;Ontology_term=GO:0019867;gbkey=CDS;gene=bamE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279572.1;locus_tag=PKHYL_RS02005;product=outer membrane protein assembly factor BamE;protein_id=WP_058024230.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	390382	390816	.	+	.	ID=gene-PKHYL_RS02010;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=PKHYL_RS02010;old_locus_tag=PKHYL_04690
NZ_AP019516.1	Protein Homology	CDS	390382	390816	.	+	0	ID=cds-WP_058024231.1;Parent=gene-PKHYL_RS02010;Dbxref=Genbank:WP_058024231.1;Name=WP_058024231.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512663.1;locus_tag=PKHYL_RS02010;product=ferric iron uptake transcriptional regulator;protein_id=WP_058024231.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	390953	392077	.	-	.	ID=gene-PKHYL_RS02015;Name=PKHYL_RS02015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02015;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	390953	392077	.	-	0	ID=cds-PKHYL_RS02015;Parent=gene-PKHYL_RS02015;Note=frameshifted;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512664.1;locus_tag=PKHYL_RS02015;product=PilT/PilU family type 4a pilus ATPase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	392198	393253	.	-	.	ID=gene-PKHYL_RS02020;Name=PKHYL_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02020;old_locus_tag=PKHYL_04730
NZ_AP019516.1	Protein Homology	CDS	392198	393253	.	-	0	ID=cds-WP_071002368.1;Parent=gene-PKHYL_RS02020;Dbxref=Genbank:WP_071002368.1;Name=WP_071002368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512665.1;locus_tag=PKHYL_RS02020;product=type IV pilus twitching motility protein PilT;protein_id=WP_071002368.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	393618	394346	.	+	.	ID=gene-PKHYL_RS02025;Name=PKHYL_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02025;old_locus_tag=PKHYL_04740
NZ_AP019516.1	Protein Homology	CDS	393618	394346	.	+	0	ID=cds-WP_093067942.1;Parent=gene-PKHYL_RS02025;Dbxref=Genbank:WP_093067942.1;Name=WP_093067942.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672255.1;locus_tag=PKHYL_RS02025;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_093067942.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	394413	395549	.	-	.	ID=gene-PKHYL_RS02030;Name=PKHYL_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02030;old_locus_tag=PKHYL_04750
NZ_AP019516.1	Protein Homology	CDS	394413	395549	.	-	0	ID=cds-WP_240365862.1;Parent=gene-PKHYL_RS02030;Dbxref=Genbank:WP_240365862.1;Name=WP_240365862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673883.1;locus_tag=PKHYL_RS02030;product=hemolysin family protein;protein_id=WP_240365862.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	396190	397881	.	-	.	ID=gene-PKHYL_RS02035;Name=PKHYL_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02035;old_locus_tag=PKHYL_04760
NZ_AP019516.1	Protein Homology	CDS	396190	397881	.	-	0	ID=cds-WP_223334572.1;Parent=gene-PKHYL_RS02035;Dbxref=Genbank:WP_223334572.1;Name=WP_223334572.1;Ontology_term=GO:0009435,GO:0003952,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,ATP binding|0005524||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512668.1;locus_tag=PKHYL_RS02035;product=NAD+ synthase;protein_id=WP_223334572.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	398719	399864	.	+	.	ID=gene-PKHYL_RS02040;Name=PKHYL_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02040;old_locus_tag=PKHYL_04770
NZ_AP019516.1	Protein Homology	CDS	398719	399864	.	+	0	ID=cds-WP_240365863.1;Parent=gene-PKHYL_RS02040;Dbxref=Genbank:WP_240365863.1;Name=WP_240365863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659021.1;locus_tag=PKHYL_RS02040;product=AI-2E family transporter;protein_id=WP_240365863.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	399942	401060	.	+	.	ID=gene-PKHYL_RS02045;Name=PKHYL_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02045;old_locus_tag=PKHYL_04780
NZ_AP019516.1	Protein Homology	CDS	399942	401060	.	+	0	ID=cds-WP_240366479.1;Parent=gene-PKHYL_RS02045;Dbxref=Genbank:WP_240366479.1;Name=WP_240366479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279580.1;locus_tag=PKHYL_RS02045;product=4-phosphoerythronate dehydrogenase;protein_id=WP_240366479.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	401147	402163	.	+	.	ID=gene-PKHYL_RS02050;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=PKHYL_RS02050;old_locus_tag=PKHYL_04790
NZ_AP019516.1	Protein Homology	CDS	401147	402163	.	+	0	ID=cds-WP_071002364.1;Parent=gene-PKHYL_RS02050;Dbxref=Genbank:WP_071002364.1;Name=WP_071002364.1;Ontology_term=GO:0006430,GO:0000166,GO:0004824,GO:0005524;gbkey=CDS;gene=epmA;go_function=nucleotide binding|0000166||IEA,lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442654.1;locus_tag=PKHYL_RS02050;product=EF-P lysine aminoacylase EpmA;protein_id=WP_071002364.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	402321	402962	.	-	.	ID=gene-PKHYL_RS02055;Name=PKHYL_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02055;old_locus_tag=PKHYL_04800
NZ_AP019516.1	Protein Homology	CDS	402321	402962	.	-	0	ID=cds-WP_071002363.1;Parent=gene-PKHYL_RS02055;Dbxref=Genbank:WP_071002363.1;Name=WP_071002363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512672.1;locus_tag=PKHYL_RS02055;product=NAD(P)H-binding protein;protein_id=WP_071002363.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	403192	403642	.	-	.	ID=gene-PKHYL_RS02060;Name=PKHYL_RS02060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02060;old_locus_tag=PKHYL_04820;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	403192	403642	.	-	0	ID=cds-PKHYL_RS02060;Parent=gene-PKHYL_RS02060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279582.1;locus_tag=PKHYL_RS02060;product=YaiI/YqxD family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	403642	404970	.	-	.	ID=gene-PKHYL_RS02065;Name=PKHYL_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02065;old_locus_tag=PKHYL_04830
NZ_AP019516.1	Protein Homology	CDS	403642	404970	.	-	0	ID=cds-WP_071002361.1;Parent=gene-PKHYL_RS02065;Dbxref=Genbank:WP_071002361.1;Name=WP_071002361.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442656.1;locus_tag=PKHYL_RS02065;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_071002361.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	405168	405720	.	-	.	ID=gene-PKHYL_RS02070;Name=purE;gbkey=Gene;gene=purE;gene_biotype=pseudogene;locus_tag=PKHYL_RS02070;old_locus_tag=PKHYL_04840;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	405168	405720	.	-	0	ID=cds-PKHYL_RS02070;Parent=gene-PKHYL_RS02070;Note=frameshifted;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201919.1;locus_tag=PKHYL_RS02070;product=5-(carboxyamino)imidazole ribonucleotide mutase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	405819	406785	.	-	.	ID=gene-PKHYL_RS02075;Name=PKHYL_RS02075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02075;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	405819	406785	.	-	0	ID=cds-PKHYL_RS02075;Parent=gene-PKHYL_RS02075;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201916.1;locus_tag=PKHYL_RS02075;product=metallophosphoesterase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	406869	407477	.	-	.	ID=gene-PKHYL_RS02080;Name=PKHYL_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02080;old_locus_tag=PKHYL_04870
NZ_AP019516.1	Protein Homology	CDS	406869	407477	.	-	0	ID=cds-WP_071002359.1;Parent=gene-PKHYL_RS02080;Dbxref=Genbank:WP_071002359.1;Name=WP_071002359.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442660.1;locus_tag=PKHYL_RS02080;product=rhomboid family intramembrane serine protease;protein_id=WP_071002359.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	407893	408195	.	+	.	ID=gene-PKHYL_RS02085;Name=PKHYL_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02085;old_locus_tag=PKHYL_04880
NZ_AP019516.1	GeneMarkS-2+	CDS	407893	408195	.	+	0	ID=cds-WP_240365864.1;Parent=gene-PKHYL_RS02085;Dbxref=Genbank:WP_240365864.1;Name=WP_240365864.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02085;product=hypothetical protein;protein_id=WP_240365864.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	408108	409526	.	+	.	ID=gene-PKHYL_RS02090;Name=PKHYL_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02090;old_locus_tag=PKHYL_04890
NZ_AP019516.1	GeneMarkS-2+	CDS	408108	409526	.	+	0	ID=cds-WP_240365865.1;Parent=gene-PKHYL_RS02090;Dbxref=Genbank:WP_240365865.1;Name=WP_240365865.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02090;product=hypothetical protein;protein_id=WP_240365865.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	409998	410420	.	+	.	ID=gene-PKHYL_RS02095;Name=PKHYL_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02095;old_locus_tag=PKHYL_04900
NZ_AP019516.1	GeneMarkS-2+	CDS	409998	410420	.	+	0	ID=cds-WP_240365866.1;Parent=gene-PKHYL_RS02095;Dbxref=Genbank:WP_240365866.1;Name=WP_240365866.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02095;product=hypothetical protein;protein_id=WP_240365866.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	410387	410899	.	+	.	ID=gene-PKHYL_RS02100;Name=PKHYL_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02100;old_locus_tag=PKHYL_04910
NZ_AP019516.1	GeneMarkS-2+	CDS	410387	410899	.	+	0	ID=cds-WP_240365867.1;Parent=gene-PKHYL_RS02100;Dbxref=Genbank:WP_240365867.1;Name=WP_240365867.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02100;product=hypothetical protein;protein_id=WP_240365867.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	410883	411590	.	+	.	ID=gene-PKHYL_RS02105;Name=PKHYL_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02105;old_locus_tag=PKHYL_04920
NZ_AP019516.1	Protein Homology	CDS	410883	411590	.	+	0	ID=cds-WP_240365868.1;Parent=gene-PKHYL_RS02105;Dbxref=Genbank:WP_240365868.1;Name=WP_240365868.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012894.2;locus_tag=PKHYL_RS02105;product=OmpA family protein;protein_id=WP_240365868.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	411724	412809	.	-	.	ID=gene-PKHYL_RS02110;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=PKHYL_RS02110;old_locus_tag=PKHYL_04930
NZ_AP019516.1	Protein Homology	CDS	411724	412809	.	-	0	ID=cds-WP_071002356.1;Parent=gene-PKHYL_RS02110;Dbxref=Genbank:WP_071002356.1;Name=WP_071002356.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201903.1;locus_tag=PKHYL_RS02110;product=beta-N-acetylhexosaminidase;protein_id=WP_071002356.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	413376	415544	.	+	.	ID=gene-PKHYL_RS02115;Name=PKHYL_RS02115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02115;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	413376	415544	.	+	0	ID=cds-PKHYL_RS02115;Parent=gene-PKHYL_RS02115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201902.1;locus_tag=PKHYL_RS02115;product=carboxy terminal-processing peptidase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	416103	416589	.	-	.	ID=gene-PKHYL_RS02120;Name=PKHYL_RS02120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02120;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	416103	416589	.	-	0	ID=cds-PKHYL_RS02120;Parent=gene-PKHYL_RS02120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005402252.1;locus_tag=PKHYL_RS02120;product=peptidylprolyl isomerase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	416912	417796	.	+	.	ID=gene-PKHYL_RS02125;Name=PKHYL_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02125;old_locus_tag=PKHYL_05000
NZ_AP019516.1	Protein Homology	CDS	416912	417796	.	+	0	ID=cds-WP_240365869.1;Parent=gene-PKHYL_RS02125;Dbxref=Genbank:WP_240365869.1;Name=WP_240365869.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036516.2;locus_tag=PKHYL_RS02125;product=hypothetical protein;protein_id=WP_240365869.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	417771	418748	.	+	.	ID=gene-PKHYL_RS02130;Name=PKHYL_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02130;old_locus_tag=PKHYL_05010
NZ_AP019516.1	Protein Homology	CDS	417771	418748	.	+	0	ID=cds-WP_240365870.1;Parent=gene-PKHYL_RS02130;Dbxref=Genbank:WP_240365870.1;Name=WP_240365870.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF017142.2;locus_tag=PKHYL_RS02130;product=PDZ domain-containing protein;protein_id=WP_240365870.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	418732	418923	.	+	.	ID=gene-PKHYL_RS02135;Name=PKHYL_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02135;old_locus_tag=PKHYL_05020
NZ_AP019516.1	GeneMarkS-2+	CDS	418732	418923	.	+	0	ID=cds-WP_240365871.1;Parent=gene-PKHYL_RS02135;Dbxref=Genbank:WP_240365871.1;Name=WP_240365871.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02135;product=hypothetical protein;protein_id=WP_240365871.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	419118	419783	.	-	.	ID=gene-PKHYL_RS02140;Name=PKHYL_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02140;old_locus_tag=PKHYL_05030
NZ_AP019516.1	Protein Homology	CDS	419118	419783	.	-	0	ID=cds-WP_240365872.1;Parent=gene-PKHYL_RS02140;Dbxref=Genbank:WP_240365872.1;Name=WP_240365872.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015658.2;locus_tag=PKHYL_RS02140;product=DUF305 domain-containing protein;protein_id=WP_240365872.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	419780	419902	.	-	.	ID=gene-PKHYL_RS17055;Name=PKHYL_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17055
NZ_AP019516.1	GeneMarkS-2+	CDS	419780	419902	.	-	0	ID=cds-WP_269778224.1;Parent=gene-PKHYL_RS17055;Dbxref=Genbank:WP_269778224.1;Name=WP_269778224.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17055;product=hypothetical protein;protein_id=WP_269778224.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	420190	420804	.	-	.	ID=gene-PKHYL_RS02145;Name=PKHYL_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02145;old_locus_tag=PKHYL_05040
NZ_AP019516.1	Protein Homology	CDS	420190	420804	.	-	0	ID=cds-WP_071002351.1;Parent=gene-PKHYL_RS02145;Dbxref=Genbank:WP_071002351.1;Name=WP_071002351.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201894.1;locus_tag=PKHYL_RS02145;product=pseudouridine synthase;protein_id=WP_071002351.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	421422	422682	.	+	.	ID=gene-PKHYL_RS02150;Name=icd;gbkey=Gene;gene=icd;gene_biotype=pseudogene;locus_tag=PKHYL_RS02150;old_locus_tag=PKHYL_05070;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	421422	422682	.	+	0	ID=cds-PKHYL_RS02150;Parent=gene-PKHYL_RS02150;Note=frameshifted;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004645539.1;locus_tag=PKHYL_RS02150;product=NADP-dependent isocitrate dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	422943	425160	.	-	.	ID=gene-PKHYL_RS02155;Name=PKHYL_RS02155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02155;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	422943	425160	.	-	0	ID=cds-PKHYL_RS02155;Parent=gene-PKHYL_RS02155;Note=frameshifted;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442671.1;locus_tag=PKHYL_RS02155;product=NADP-dependent isocitrate dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	425783	427133	.	+	.	ID=gene-PKHYL_RS02160;Name=PKHYL_RS02160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02160;old_locus_tag=PKHYL_05110;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	425783	427133	.	+	0	ID=cds-PKHYL_RS02160;Parent=gene-PKHYL_RS02160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201889.1;locus_tag=PKHYL_RS02160;product=peptidogalycan biosysnthesis protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	427210	427749	.	+	.	ID=gene-PKHYL_RS02165;Name=PKHYL_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02165;old_locus_tag=PKHYL_05130
NZ_AP019516.1	Protein Homology	CDS	427210	427749	.	+	0	ID=cds-WP_240365873.1;Parent=gene-PKHYL_RS02165;Dbxref=Genbank:WP_240365873.1;Name=WP_240365873.1;Ontology_term=GO:0006744,GO:0008813,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=chorismate lyase activity|0008813||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442673.1;locus_tag=PKHYL_RS02165;product=chorismate lyase;protein_id=WP_240365873.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	428437	429699	.	+	.	ID=gene-PKHYL_RS02170;Name=PKHYL_RS02170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02170;old_locus_tag=PKHYL_05150;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	428437	429699	.	+	0	ID=cds-PKHYL_RS02170;Parent=gene-PKHYL_RS02170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996068.1;locus_tag=PKHYL_RS02170;product=serine hydroxymethyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	429785	430243	.	+	.	ID=gene-PKHYL_RS02175;Name=PKHYL_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02175;old_locus_tag=PKHYL_05160
NZ_AP019516.1	GeneMarkS-2+	CDS	429785	430243	.	+	0	ID=cds-WP_071002344.1;Parent=gene-PKHYL_RS02175;Dbxref=Genbank:WP_071002344.1;Name=WP_071002344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02175;product=hypothetical protein;protein_id=WP_071002344.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	430419	430865	.	-	.	ID=gene-PKHYL_RS02180;Name=PKHYL_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02180;old_locus_tag=PKHYL_05170
NZ_AP019516.1	GeneMarkS-2+	CDS	430419	430865	.	-	0	ID=cds-WP_240365874.1;Parent=gene-PKHYL_RS02180;Dbxref=Genbank:WP_240365874.1;Name=WP_240365874.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02180;product=hypothetical protein;protein_id=WP_240365874.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	430799	431116	.	-	.	ID=gene-PKHYL_RS02185;Name=PKHYL_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02185;old_locus_tag=PKHYL_05180
NZ_AP019516.1	GeneMarkS-2+	CDS	430799	431116	.	-	0	ID=cds-WP_240365875.1;Parent=gene-PKHYL_RS02185;Dbxref=Genbank:WP_240365875.1;Name=WP_240365875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02185;product=hypothetical protein;protein_id=WP_240365875.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	431297	431889	.	-	.	ID=gene-PKHYL_RS02190;Name=PKHYL_RS02190;end_range=431889,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02190;old_locus_tag=PKHYL_05190;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	431297	431889	.	-	0	ID=cds-PKHYL_RS02190;Parent=gene-PKHYL_RS02190;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=431889,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395772.1;locus_tag=PKHYL_RS02190;partial=true;product=sodium/glutamate symporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	432039	432338	.	-	.	ID=gene-PKHYL_RS02195;Name=PKHYL_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02195;old_locus_tag=PKHYL_05200
NZ_AP019516.1	Protein Homology	CDS	432039	432338	.	-	0	ID=cds-WP_240365876.1;Parent=gene-PKHYL_RS02195;Dbxref=Genbank:WP_240365876.1;Name=WP_240365876.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013500.2;locus_tag=PKHYL_RS02195;product=barstar family protein;protein_id=WP_240365876.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	432340	432978	.	-	.	ID=gene-PKHYL_RS02200;Name=PKHYL_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02200;old_locus_tag=PKHYL_05210
NZ_AP019516.1	Protein Homology	CDS	432340	432978	.	-	0	ID=cds-WP_240365877.1;Parent=gene-PKHYL_RS02200;Dbxref=Genbank:WP_240365877.1;Name=WP_240365877.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012755.2;locus_tag=PKHYL_RS02200;product=DNA-binding protein;protein_id=WP_240365877.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	432981	433082	.	-	.	ID=gene-PKHYL_RS02205;Name=PKHYL_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02205
NZ_AP019516.1	GeneMarkS-2+	CDS	432981	433082	.	-	0	ID=cds-WP_240365878.1;Parent=gene-PKHYL_RS02205;Dbxref=Genbank:WP_240365878.1;Name=WP_240365878.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02205;product=cold shock domain-containing protein;protein_id=WP_240365878.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	433205	434507	.	-	.	ID=gene-PKHYL_RS02210;Name=PKHYL_RS02210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02210;old_locus_tag=PKHYL_05220;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	433205	434507	.	-	0	ID=cds-PKHYL_RS02210;Parent=gene-PKHYL_RS02210;Note=frameshifted;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512692.1;locus_tag=PKHYL_RS02210;product=glutamate-5-semialdehyde dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	434872	435102	.	+	.	ID=gene-PKHYL_RS02215;Name=PKHYL_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02215;old_locus_tag=PKHYL_05240
NZ_AP019516.1	GeneMarkS-2+	CDS	434872	435102	.	+	0	ID=cds-WP_240365879.1;Parent=gene-PKHYL_RS02215;Dbxref=Genbank:WP_240365879.1;Name=WP_240365879.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02215;product=hypothetical protein;protein_id=WP_240365879.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	435516	436313	.	+	.	ID=gene-PKHYL_RS02220;Name=PKHYL_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02220;old_locus_tag=PKHYL_05250
NZ_AP019516.1	Protein Homology	CDS	435516	436313	.	+	0	ID=cds-WP_071002339.1;Parent=gene-PKHYL_RS02220;Dbxref=Genbank:WP_071002339.1;Name=WP_071002339.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512694.1;locus_tag=PKHYL_RS02220;product=ATP-binding cassette domain-containing protein;protein_id=WP_071002339.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	436615	437415	.	+	.	ID=gene-PKHYL_RS02225;Name=PKHYL_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02225;old_locus_tag=PKHYL_05260
NZ_AP019516.1	Protein Homology	CDS	436615	437415	.	+	0	ID=cds-WP_240365880.1;Parent=gene-PKHYL_RS02225;Dbxref=Genbank:WP_240365880.1;Name=WP_240365880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279603.1;locus_tag=PKHYL_RS02225;product=transporter substrate-binding domain-containing protein;protein_id=WP_240365880.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	437702	438402	.	+	.	ID=gene-PKHYL_RS02230;Name=PKHYL_RS02230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02230;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	437702	438402	.	+	0	ID=cds-PKHYL_RS02230;Parent=gene-PKHYL_RS02230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=PKHYL_RS02230;product=transporter substrate-binding domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	438532	439460	.	+	.	ID=gene-PKHYL_RS02235;Name=PKHYL_RS02235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02235;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	438532	439460	.	+	0	ID=cds-PKHYL_RS02235;Parent=gene-PKHYL_RS02235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201854.1;locus_tag=PKHYL_RS02235;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	439930	440664	.	+	.	ID=gene-PKHYL_RS02240;Name=PKHYL_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02240;old_locus_tag=PKHYL_05300
NZ_AP019516.1	Protein Homology	CDS	439930	440664	.	+	0	ID=cds-WP_071002335.1;Parent=gene-PKHYL_RS02240;Dbxref=Genbank:WP_071002335.1;Name=WP_071002335.1;Note=The N-terminal region of this protein%2C as described by TIGR01726%2C is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits%2C which specificities that include histidine%2C arginine%2C glutamine%2C glutamate%2C L-cystine (sic)%2C the opines (in Agrobacterium) octopine and nopaline%2C etc.;Ontology_term=GO:0015837,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442682.1;locus_tag=PKHYL_RS02240;product=ABC transporter permease subunit;protein_id=WP_071002335.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	440677	441401	.	+	.	ID=gene-PKHYL_RS02245;Name=PKHYL_RS02245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02245;old_locus_tag=PKHYL_05310;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	440677	441401	.	+	0	ID=cds-PKHYL_RS02245;Parent=gene-PKHYL_RS02245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201852.1;locus_tag=PKHYL_RS02245;product=ABC transporter permease;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	441507	442223	.	+	.	ID=gene-PKHYL_RS02250;Name=PKHYL_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02250;old_locus_tag=PKHYL_05320
NZ_AP019516.1	Protein Homology	CDS	441507	442223	.	+	0	ID=cds-WP_240365881.1;Parent=gene-PKHYL_RS02250;Dbxref=Genbank:WP_240365881.1;Name=WP_240365881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201851.1;locus_tag=PKHYL_RS02250;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_240365881.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	442507	444733	.	+	.	ID=gene-PKHYL_RS02255;Name=PKHYL_RS02255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02255;old_locus_tag=PKHYL_05330;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	442507	444733	.	+	0	ID=cds-PKHYL_RS02255;Parent=gene-PKHYL_RS02255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005250669.1;locus_tag=PKHYL_RS02255;product=PhoX family phosphatase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	444992	445249	.	+	.	ID=gene-PKHYL_RS02260;Name=PKHYL_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02260;old_locus_tag=PKHYL_05350
NZ_AP019516.1	GeneMarkS-2+	CDS	444992	445249	.	+	0	ID=cds-WP_240365882.1;Parent=gene-PKHYL_RS02260;Dbxref=Genbank:WP_240365882.1;Name=WP_240365882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02260;product=hypothetical protein;protein_id=WP_240365882.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	445287	446486	.	+	.	ID=gene-PKHYL_RS02265;Name=PKHYL_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02265;old_locus_tag=PKHYL_05360
NZ_AP019516.1	Protein Homology	CDS	445287	446486	.	+	0	ID=cds-WP_240365883.1;Parent=gene-PKHYL_RS02265;Dbxref=Genbank:WP_240365883.1;Name=WP_240365883.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019436.2;locus_tag=PKHYL_RS02265;product=GPI inositol-deacylase;protein_id=WP_240365883.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	446522	446953	.	-	.	ID=gene-PKHYL_RS02270;Name=PKHYL_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02270;old_locus_tag=PKHYL_05370
NZ_AP019516.1	GeneMarkS-2+	CDS	446522	446953	.	-	0	ID=cds-WP_071002332.1;Parent=gene-PKHYL_RS02270;Dbxref=Genbank:WP_071002332.1;Name=WP_071002332.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02270;product=hypothetical protein;protein_id=WP_071002332.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	447188	447409	.	-	.	ID=gene-PKHYL_RS02275;Name=PKHYL_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02275;old_locus_tag=PKHYL_05380
NZ_AP019516.1	GeneMarkS-2+	CDS	447188	447409	.	-	0	ID=cds-WP_071002331.1;Parent=gene-PKHYL_RS02275;Dbxref=Genbank:WP_071002331.1;Name=WP_071002331.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02275;product=hypothetical protein;protein_id=WP_071002331.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	447513	448493	.	-	.	ID=gene-PKHYL_RS02280;Name=PKHYL_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02280;old_locus_tag=PKHYL_05390
NZ_AP019516.1	Protein Homology	CDS	447513	448493	.	-	0	ID=cds-WP_071002330.1;Parent=gene-PKHYL_RS02280;Dbxref=Genbank:WP_071002330.1;Name=WP_071002330.1;Ontology_term=GO:0006457,GO:0051082,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512703.1;locus_tag=PKHYL_RS02280;product=Hsp33 family molecular chaperone HslO;protein_id=WP_071002330.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	448901	449887	.	+	.	ID=gene-PKHYL_RS02285;Name=PKHYL_RS02285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02285;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	448901	449887	.	+	0	ID=cds-PKHYL_RS02285;Parent=gene-PKHYL_RS02285;Note=frameshifted;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201843.1;locus_tag=PKHYL_RS02285;product=glutamate/aspartate ABC transporter substrate-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	449977	450723	.	+	.	ID=gene-PKHYL_RS02290;Name=PKHYL_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02290;old_locus_tag=PKHYL_05430
NZ_AP019516.1	Protein Homology	CDS	449977	450723	.	+	0	ID=cds-WP_071002328.1;Parent=gene-PKHYL_RS02290;Dbxref=Genbank:WP_071002328.1;Name=WP_071002328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201841.1;locus_tag=PKHYL_RS02290;product=amino acid ABC transporter permease;protein_id=WP_071002328.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	450720	451391	.	+	.	ID=gene-PKHYL_RS02295;Name=PKHYL_RS02295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02295;old_locus_tag=PKHYL_05440;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	450720	451391	.	+	0	ID=cds-PKHYL_RS02295;Parent=gene-PKHYL_RS02295;Note=The N-terminal region of this protein%2C as described by TIGR01726%2C is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits%2C which specificities that include histidine%2C arginine%2C glutamine%2C glutamate%2C L-cystine (sic)%2C the opines (in Agrobacterium) octopine and nopaline%2C etc.%3B internal stop;Ontology_term=GO:0015837,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201838.1;locus_tag=PKHYL_RS02295;product=ABC transporter permease subunit;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	451567	452299	.	+	.	ID=gene-PKHYL_RS02300;Name=PKHYL_RS02300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02300;old_locus_tag=PKHYL_05460;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	451567	452299	.	+	0	ID=cds-PKHYL_RS02300;Parent=gene-PKHYL_RS02300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_250030.1;locus_tag=PKHYL_RS02300;product=amino acid ABC transporter ATP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	452630	453127	.	+	.	ID=gene-PKHYL_RS02305;Name=PKHYL_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02305;old_locus_tag=PKHYL_05470
NZ_AP019516.1	Protein Homology	CDS	452630	453127	.	+	0	ID=cds-WP_240365884.1;Parent=gene-PKHYL_RS02305;Dbxref=Genbank:WP_240365884.1;Name=WP_240365884.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF019604.2;locus_tag=PKHYL_RS02305;product=FAD-dependent oxidoreductase;protein_id=WP_240365884.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	453024	453890	.	+	.	ID=gene-PKHYL_RS02310;Name=PKHYL_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02310;old_locus_tag=PKHYL_05480
NZ_AP019516.1	Protein Homology	CDS	453024	453890	.	+	0	ID=cds-WP_240365885.1;Parent=gene-PKHYL_RS02310;Dbxref=Genbank:WP_240365885.1;Name=WP_240365885.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF019604.2;locus_tag=PKHYL_RS02310;product=FAD-dependent oxidoreductase;protein_id=WP_240365885.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	454196	455973	.	+	.	ID=gene-PKHYL_RS02315;Name=PKHYL_RS02315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02315;old_locus_tag=PKHYL_05490;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	454196	455973	.	+	0	ID=cds-PKHYL_RS02315;Parent=gene-PKHYL_RS02315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201827.1;locus_tag=PKHYL_RS02315;product=AMP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	456166	457709	.	+	.	ID=gene-PKHYL_RS02320;Name=PKHYL_RS02320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02320;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	456166	457709	.	+	0	ID=cds-PKHYL_RS02320;Parent=gene-PKHYL_RS02320;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013225.2;locus_tag=PKHYL_RS02320;product=methylcrotonoyl-CoA carboxylase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	457880	458698	.	+	.	ID=gene-PKHYL_RS02325;Name=PKHYL_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02325;old_locus_tag=PKHYL_05540
NZ_AP019516.1	Protein Homology	CDS	457880	458698	.	+	0	ID=cds-WP_240365886.1;Parent=gene-PKHYL_RS02325;Dbxref=Genbank:WP_240365886.1;Name=WP_240365886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201822.1;locus_tag=PKHYL_RS02325;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_240365886.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	458769	460150	.	+	.	ID=gene-PKHYL_RS02330;Name=PKHYL_RS02330;end_range=460150,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02330;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	458769	460150	.	+	0	ID=cds-PKHYL_RS02330;Parent=gene-PKHYL_RS02330;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524,GO:0046872;end_range=460150,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014206448.1;locus_tag=PKHYL_RS02330;partial=true;product=acetyl-CoA carboxylase biotin carboxylase subunit;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	460585	460764	.	+	.	ID=gene-PKHYL_RS02335;Name=PKHYL_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02335;old_locus_tag=PKHYL_05570
NZ_AP019516.1	GeneMarkS-2+	CDS	460585	460764	.	+	0	ID=cds-WP_240365887.1;Parent=gene-PKHYL_RS02335;Dbxref=Genbank:WP_240365887.1;Name=WP_240365887.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02335;product=hypothetical protein;protein_id=WP_240365887.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	460761	460883	.	+	.	ID=gene-PKHYL_RS02340;Name=PKHYL_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02340;old_locus_tag=PKHYL_05580
NZ_AP019516.1	Protein Homology	CDS	460761	460883	.	+	0	ID=cds-WP_240365888.1;Parent=gene-PKHYL_RS02340;Dbxref=Genbank:WP_240365888.1;Name=WP_240365888.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012584.2;locus_tag=PKHYL_RS02340;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=WP_240365888.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	460899	461819	.	+	.	ID=gene-PKHYL_RS02345;Name=PKHYL_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02345;old_locus_tag=PKHYL_05590
NZ_AP019516.1	Protein Homology	CDS	460899	461819	.	+	0	ID=cds-WP_071002321.1;Parent=gene-PKHYL_RS02345;Dbxref=Genbank:WP_071002321.1;Name=WP_071002321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279620.1;locus_tag=PKHYL_RS02345;product=hydroxymethylglutaryl-CoA lyase;protein_id=WP_071002321.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	461967	463154	.	+	.	ID=gene-PKHYL_RS02350;Name=PKHYL_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02350;old_locus_tag=PKHYL_05600
NZ_AP019516.1	Protein Homology	CDS	461967	463154	.	+	0	ID=cds-WP_071002320.1;Parent=gene-PKHYL_RS02350;Dbxref=Genbank:WP_071002320.1;Name=WP_071002320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017396625.1;locus_tag=PKHYL_RS02350;product=isovaleryl-CoA dehydrogenase;protein_id=WP_071002320.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	463308	464017	.	-	.	ID=gene-PKHYL_RS02355;Name=PKHYL_RS02355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02355;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	463308	464017	.	-	0	ID=cds-PKHYL_RS02355;Parent=gene-PKHYL_RS02355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442698.1;locus_tag=PKHYL_RS02355;product=pantothenate kinase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	464213	465064	.	-	.	ID=gene-PKHYL_RS02360;Name=PKHYL_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02360;old_locus_tag=PKHYL_05640
NZ_AP019516.1	Protein Homology	CDS	464213	465064	.	-	0	ID=cds-WP_240365889.1;Parent=gene-PKHYL_RS02360;Dbxref=Genbank:WP_240365889.1;Name=WP_240365889.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015084.2;locus_tag=PKHYL_RS02360;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_240365889.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	465518	466321	.	+	.	ID=gene-PKHYL_RS02365;Name=PKHYL_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02365;old_locus_tag=PKHYL_05650
NZ_AP019516.1	Protein Homology	CDS	465518	466321	.	+	0	ID=cds-WP_240366480.1;Parent=gene-PKHYL_RS02365;Dbxref=Genbank:WP_240366480.1;Name=WP_240366480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444447.1;locus_tag=PKHYL_RS02365;product=sulfite exporter TauE/SafE family protein;protein_id=WP_240366480.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	466471	467319	.	-	.	ID=gene-PKHYL_RS02370;Name=PKHYL_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02370;old_locus_tag=PKHYL_05660
NZ_AP019516.1	Protein Homology	CDS	466471	467319	.	-	0	ID=cds-WP_240365890.1;Parent=gene-PKHYL_RS02370;Dbxref=Genbank:WP_240365890.1;Name=WP_240365890.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513671.1;locus_tag=PKHYL_RS02370;product=IS630 family transposase;protein_id=WP_240365890.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	467376	468014	.	+	.	ID=gene-PKHYL_RS02375;Name=PKHYL_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02375;old_locus_tag=PKHYL_05670
NZ_AP019516.1	Protein Homology	CDS	467376	468014	.	+	0	ID=cds-WP_240365891.1;Parent=gene-PKHYL_RS02375;Dbxref=Genbank:WP_240365891.1;Name=WP_240365891.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037126.2;locus_tag=PKHYL_RS02375;product=hypothetical protein;protein_id=WP_240365891.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	468263	469204	.	+	.	ID=gene-PKHYL_RS02380;Name=PKHYL_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02380;old_locus_tag=PKHYL_05690
NZ_AP019516.1	GeneMarkS-2+	CDS	468263	469204	.	+	0	ID=cds-WP_240365892.1;Parent=gene-PKHYL_RS02380;Dbxref=Genbank:WP_240365892.1;Name=WP_240365892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02380;product=hypothetical protein;protein_id=WP_240365892.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	469271	469764	.	+	.	ID=gene-PKHYL_RS02385;Name=PKHYL_RS02385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02385;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	469271	469764	.	+	0	ID=cds-PKHYL_RS02385;Parent=gene-PKHYL_RS02385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014516.2;locus_tag=PKHYL_RS02385;product=AAA family ATPase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	469736	469957	.	+	.	ID=gene-PKHYL_RS02390;Name=PKHYL_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02390;old_locus_tag=PKHYL_05710
NZ_AP019516.1	GeneMarkS-2+	CDS	469736	469957	.	+	0	ID=cds-WP_240365893.1;Parent=gene-PKHYL_RS02390;Dbxref=Genbank:WP_240365893.1;Name=WP_240365893.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02390;product=hypothetical protein;protein_id=WP_240365893.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	469950	472937	.	+	.	ID=gene-PKHYL_RS02395;Name=PKHYL_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02395;old_locus_tag=PKHYL_05720
NZ_AP019516.1	GeneMarkS-2+	CDS	469950	472937	.	+	0	ID=cds-WP_240365894.1;Parent=gene-PKHYL_RS02395;Dbxref=Genbank:WP_240365894.1;Name=WP_240365894.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02395;product=chromosome segregation protein SMC;protein_id=WP_240365894.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	472943	473212	.	+	.	ID=gene-PKHYL_RS02400;Name=PKHYL_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02400;old_locus_tag=PKHYL_05730
NZ_AP019516.1	Protein Homology	CDS	472943	473212	.	+	0	ID=cds-WP_240365895.1;Parent=gene-PKHYL_RS02400;Dbxref=Genbank:WP_240365895.1;Name=WP_240365895.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014516.2;locus_tag=PKHYL_RS02400;product=hypothetical protein;protein_id=WP_240365895.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	473428	474093	.	+	.	ID=gene-PKHYL_RS02405;Name=PKHYL_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02405;old_locus_tag=PKHYL_05740
NZ_AP019516.1	GeneMarkS-2+	CDS	473428	474093	.	+	0	ID=cds-WP_240365896.1;Parent=gene-PKHYL_RS02405;Dbxref=Genbank:WP_240365896.1;Name=WP_240365896.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02405;product=hypothetical protein;protein_id=WP_240365896.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	474104	474193	.	+	.	ID=gene-PKHYL_RS17060;Name=PKHYL_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17060
NZ_AP019516.1	Protein Homology	CDS	474104	474193	.	+	0	ID=cds-WP_269778225.1;Parent=gene-PKHYL_RS17060;Dbxref=Genbank:WP_269778225.1;Name=WP_269778225.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016257.2;locus_tag=PKHYL_RS17060;product=hypothetical protein;protein_id=WP_269778225.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	474180	474446	.	+	.	ID=gene-PKHYL_RS02410;Name=PKHYL_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02410;old_locus_tag=PKHYL_05760
NZ_AP019516.1	Protein Homology	CDS	474180	474446	.	+	0	ID=cds-WP_269778226.1;Parent=gene-PKHYL_RS02410;Dbxref=Genbank:WP_269778226.1;Name=WP_269778226.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016257.2;locus_tag=PKHYL_RS02410;product=hypothetical protein;protein_id=WP_269778226.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	474867	476860	.	+	.	ID=gene-PKHYL_RS02415;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=pseudogene;locus_tag=PKHYL_RS02415;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	474867	476860	.	+	0	ID=cds-PKHYL_RS02415;Parent=gene-PKHYL_RS02415;Note=frameshifted;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519989.1;locus_tag=PKHYL_RS02415;product=NAD-dependent DNA ligase LigA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	477061	477528	.	+	.	ID=gene-PKHYL_RS02420;Name=PKHYL_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02420;old_locus_tag=PKHYL_05800
NZ_AP019516.1	GeneMarkS-2+	CDS	477061	477528	.	+	0	ID=cds-WP_240365897.1;Parent=gene-PKHYL_RS02420;Dbxref=Genbank:WP_240365897.1;Name=WP_240365897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02420;product=hypothetical protein;protein_id=WP_240365897.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	477666	477815	.	+	.	ID=gene-PKHYL_RS02425;Name=PKHYL_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02425;old_locus_tag=PKHYL_05810
NZ_AP019516.1	GeneMarkS-2+	CDS	477666	477815	.	+	0	ID=cds-WP_240365898.1;Parent=gene-PKHYL_RS02425;Dbxref=Genbank:WP_240365898.1;Name=WP_240365898.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02425;product=hypothetical protein;protein_id=WP_240365898.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	478281	479138	.	+	.	ID=gene-PKHYL_RS02430;Name=PKHYL_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02430;old_locus_tag=PKHYL_05820
NZ_AP019516.1	Protein Homology	CDS	478281	479138	.	+	0	ID=cds-WP_156770978.1;Parent=gene-PKHYL_RS02430;Dbxref=Genbank:WP_156770978.1;Name=WP_156770978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014978043.1;locus_tag=PKHYL_RS02430;product=glutaredoxin;protein_id=WP_156770978.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	479183	479710	.	-	.	ID=gene-PKHYL_RS02435;Name=PKHYL_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02435;old_locus_tag=PKHYL_05830
NZ_AP019516.1	GeneMarkS-2+	CDS	479183	479710	.	-	0	ID=cds-WP_240365899.1;Parent=gene-PKHYL_RS02435;Dbxref=Genbank:WP_240365899.1;Name=WP_240365899.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02435;product=hypothetical protein;protein_id=WP_240365899.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	480089	480268	.	-	.	ID=gene-PKHYL_RS02440;Name=PKHYL_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02440;old_locus_tag=PKHYL_05840
NZ_AP019516.1	GeneMarkS-2+	CDS	480089	480268	.	-	0	ID=cds-WP_240365900.1;Parent=gene-PKHYL_RS02440;Dbxref=Genbank:WP_240365900.1;Name=WP_240365900.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02440;product=hypothetical protein;protein_id=WP_240365900.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	480661	483137	.	-	.	ID=gene-PKHYL_RS02445;Name=PKHYL_RS02445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02445;old_locus_tag=PKHYL_05850;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	480661	483137	.	-	0	ID=cds-PKHYL_RS02445;Parent=gene-PKHYL_RS02445;Note=frameshifted;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005804000.1;locus_tag=PKHYL_RS02445;product=YgiQ family radical SAM protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	483657	484968	.	+	.	ID=gene-PKHYL_RS02450;Name=PKHYL_RS02450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02450;old_locus_tag=PKHYL_05860;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	483657	484968	.	+	0	ID=cds-PKHYL_RS02450;Parent=gene-PKHYL_RS02450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201800.1;locus_tag=PKHYL_RS02450;product=ammonium transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	484979	485611	.	+	.	ID=gene-PKHYL_RS02455;Name=PKHYL_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02455;old_locus_tag=PKHYL_05870
NZ_AP019516.1	GeneMarkS-2+	CDS	484979	485611	.	+	0	ID=cds-WP_071002306.1;Parent=gene-PKHYL_RS02455;Dbxref=Genbank:WP_071002306.1;Name=WP_071002306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02455;product=hypothetical protein;protein_id=WP_071002306.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	485704	486093	.	-	.	ID=gene-PKHYL_RS02460;Name=PKHYL_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02460;old_locus_tag=PKHYL_05880
NZ_AP019516.1	GeneMarkS-2+	CDS	485704	486093	.	-	0	ID=cds-WP_240365901.1;Parent=gene-PKHYL_RS02460;Dbxref=Genbank:WP_240365901.1;Name=WP_240365901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02460;product=hypothetical protein;protein_id=WP_240365901.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	486111	486371	.	-	.	ID=gene-PKHYL_RS02465;Name=PKHYL_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02465;old_locus_tag=PKHYL_05890
NZ_AP019516.1	GeneMarkS-2+	CDS	486111	486371	.	-	0	ID=cds-WP_240365902.1;Parent=gene-PKHYL_RS02465;Dbxref=Genbank:WP_240365902.1;Name=WP_240365902.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02465;product=hypothetical protein;protein_id=WP_240365902.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	486607	487074	.	-	.	ID=gene-PKHYL_RS02470;Name=PKHYL_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02470;old_locus_tag=PKHYL_05900
NZ_AP019516.1	Protein Homology	CDS	486607	487074	.	-	0	ID=cds-WP_071002305.1;Parent=gene-PKHYL_RS02470;Dbxref=Genbank:WP_071002305.1;Name=WP_071002305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512726.1;locus_tag=PKHYL_RS02470;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_071002305.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	487319	488338	.	+	.	ID=gene-PKHYL_RS02475;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=PKHYL_RS02475;old_locus_tag=PKHYL_05910
NZ_AP019516.1	Protein Homology	CDS	487319	488338	.	+	0	ID=cds-WP_237182795.1;Parent=gene-PKHYL_RS02475;Dbxref=Genbank:WP_237182795.1;Name=WP_237182795.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201797.1;locus_tag=PKHYL_RS02475;product=EamA family transporter RarD;protein_id=WP_237182795.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	488611	489087	.	-	.	ID=gene-PKHYL_RS02480;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=PKHYL_RS02480;old_locus_tag=PKHYL_05920
NZ_AP019516.1	Protein Homology	CDS	488611	489087	.	-	0	ID=cds-WP_071002304.1;Parent=gene-PKHYL_RS02480;Dbxref=Genbank:WP_071002304.1;Name=WP_071002304.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279632.1;locus_tag=PKHYL_RS02480;product=SsrA-binding protein SmpB;protein_id=WP_071002304.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	489347	489859	.	+	.	ID=gene-PKHYL_RS02485;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=PKHYL_RS02485;old_locus_tag=PKHYL_05930
NZ_AP019516.1	Protein Homology	CDS	489347	489859	.	+	0	ID=cds-WP_240366481.1;Parent=gene-PKHYL_RS02485;Dbxref=Genbank:WP_240366481.1;Name=WP_240366481.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279633.1;locus_tag=PKHYL_RS02485;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_240366481.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	489956	490204	.	+	.	ID=gene-PKHYL_RS02490;Name=PKHYL_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02490;old_locus_tag=PKHYL_05940
NZ_AP019516.1	Protein Homology	CDS	489956	490204	.	+	0	ID=cds-WP_058024492.1;Parent=gene-PKHYL_RS02490;Dbxref=Genbank:WP_058024492.1;Name=WP_058024492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512730.1;locus_tag=PKHYL_RS02490;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_058024492.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	490275	491578	.	+	.	ID=gene-PKHYL_RS02495;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=pseudogene;locus_tag=PKHYL_RS02495;old_locus_tag=PKHYL_05950;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	490275	491578	.	+	0	ID=cds-PKHYL_RS02495;Parent=gene-PKHYL_RS02495;Note=frameshifted;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442710.1;locus_tag=PKHYL_RS02495;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	491581	492299	.	+	.	ID=gene-PKHYL_RS02500;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=pseudogene;locus_tag=PKHYL_RS02500;old_locus_tag=PKHYL_05970;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	491581	492299	.	+	0	ID=cds-PKHYL_RS02500;Parent=gene-PKHYL_RS02500;Note=frameshifted;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003675485.1;locus_tag=PKHYL_RS02500;product=dethiobiotin synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	492394	492776	.	+	.	ID=gene-PKHYL_RS02505;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=PKHYL_RS02505
NZ_AP019516.1	cmsearch	RNase_P_RNA	492394	492776	.	+	.	ID=rna-PKHYL_RS02505;Parent=gene-PKHYL_RS02505;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS02505;product=RNase P RNA component class A
NZ_AP019516.1	cmsearch	exon	492394	492776	.	+	.	ID=exon-PKHYL_RS02505-1;Parent=rna-PKHYL_RS02505;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS02505;product=RNase P RNA component class A
NZ_AP019516.1	RefSeq	gene	492899	492975	.	+	.	ID=gene-PKHYL_RS02510;Name=PKHYL_RS02510;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS02510;old_locus_tag=PKHYL_t00100
NZ_AP019516.1	tRNAscan-SE	tRNA	492899	492975	.	+	.	ID=rna-PKHYL_RS02510;Parent=gene-PKHYL_RS02510;anticodon=(pos:492933..492935);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS02510;product=tRNA-Met
NZ_AP019516.1	tRNAscan-SE	exon	492899	492975	.	+	.	ID=exon-PKHYL_RS02510-1;Parent=rna-PKHYL_RS02510;anticodon=(pos:492933..492935);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS02510;product=tRNA-Met
NZ_AP019516.1	RefSeq	gene	493380	495179	.	+	.	ID=gene-PKHYL_RS02515;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=PKHYL_RS02515;old_locus_tag=PKHYL_05980
NZ_AP019516.1	Protein Homology	CDS	493380	495179	.	+	0	ID=cds-WP_071002301.1;Parent=gene-PKHYL_RS02515;Dbxref=Genbank:WP_071002301.1;Name=WP_071002301.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004751732.1;locus_tag=PKHYL_RS02515;product=translation elongation factor 4;protein_id=WP_071002301.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	495282	496181	.	+	.	ID=gene-PKHYL_RS02520;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=PKHYL_RS02520;old_locus_tag=PKHYL_05990
NZ_AP019516.1	Protein Homology	CDS	495282	496181	.	+	0	ID=cds-WP_240365903.1;Parent=gene-PKHYL_RS02520;Dbxref=Genbank:WP_240365903.1;Name=WP_240365903.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279638.1;locus_tag=PKHYL_RS02520;product=signal peptidase I;protein_id=WP_240365903.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	496325	496717	.	+	.	ID=gene-PKHYL_RS02525;Name=PKHYL_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02525;old_locus_tag=PKHYL_06000
NZ_AP019516.1	Protein Homology	CDS	496325	496717	.	+	0	ID=cds-WP_223334848.1;Parent=gene-PKHYL_RS02525;Dbxref=Genbank:WP_223334848.1;Name=WP_223334848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512735.1;locus_tag=PKHYL_RS02525;product=DUF4845 domain-containing protein;protein_id=WP_223334848.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	496821	497618	.	+	.	ID=gene-PKHYL_RS02530;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=PKHYL_RS02530;old_locus_tag=PKHYL_06010
NZ_AP019516.1	Protein Homology	CDS	496821	497618	.	+	0	ID=cds-WP_071002298.1;Parent=gene-PKHYL_RS02530;Dbxref=Genbank:WP_071002298.1;Name=WP_071002298.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442714.1;locus_tag=PKHYL_RS02530;product=ribonuclease III;protein_id=WP_071002298.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	497867	498898	.	+	.	ID=gene-PKHYL_RS02535;Name=era;gbkey=Gene;gene=era;gene_biotype=pseudogene;locus_tag=PKHYL_RS02535;old_locus_tag=PKHYL_06020;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	497867	498898	.	+	0	ID=cds-PKHYL_RS02535;Parent=gene-PKHYL_RS02535;Note=internal stop;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658708.1;locus_tag=PKHYL_RS02535;product=GTPase Era;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	498961	499131	.	+	.	ID=gene-PKHYL_RS02540;Name=PKHYL_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02540
NZ_AP019516.1	Protein Homology	CDS	498961	499131	.	+	0	ID=cds-WP_240365904.1;Parent=gene-PKHYL_RS02540;Dbxref=Genbank:WP_240365904.1;Name=WP_240365904.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023393.2;locus_tag=PKHYL_RS02540;product=recombination protein O N-terminal domain-containing protein;protein_id=WP_240365904.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	499310	499504	.	+	.	ID=gene-PKHYL_RS02545;Name=PKHYL_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02545;old_locus_tag=PKHYL_06030
NZ_AP019516.1	Protein Homology	CDS	499310	499504	.	+	0	ID=cds-WP_240366482.1;Parent=gene-PKHYL_RS02545;Dbxref=Genbank:WP_240366482.1;Name=WP_240366482.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014607.2;locus_tag=PKHYL_RS02545;product=hypothetical protein;protein_id=WP_240366482.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	499482	499736	.	+	.	ID=gene-PKHYL_RS02550;Name=PKHYL_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02550;old_locus_tag=PKHYL_06040
NZ_AP019516.1	GeneMarkS-2+	CDS	499482	499736	.	+	0	ID=cds-WP_240365905.1;Parent=gene-PKHYL_RS02550;Dbxref=Genbank:WP_240365905.1;Name=WP_240365905.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02550;product=hypothetical protein;protein_id=WP_240365905.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	499942	500670	.	-	.	ID=gene-PKHYL_RS02555;Name=PKHYL_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02555;old_locus_tag=PKHYL_06050
NZ_AP019516.1	Protein Homology	CDS	499942	500670	.	-	0	ID=cds-WP_227517195.1;Parent=gene-PKHYL_RS02555;Dbxref=Genbank:WP_227517195.1;Name=WP_227517195.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279644.1;locus_tag=PKHYL_RS02555;product=GspH/FimT family pseudopilin;protein_id=WP_227517195.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	501536	502720	.	+	.	ID=gene-PKHYL_RS02560;Name=PKHYL_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02560;old_locus_tag=PKHYL_06060
NZ_AP019516.1	Protein Homology	CDS	501536	502720	.	+	0	ID=cds-WP_186475117.1;Parent=gene-PKHYL_RS02560;Dbxref=Genbank:WP_186475117.1;Name=WP_186475117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003662682.1;locus_tag=PKHYL_RS02560;product=OmpA family protein;protein_id=WP_186475117.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	503068	504918	.	+	.	ID=gene-PKHYL_RS02565;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=PKHYL_RS02565;old_locus_tag=PKHYL_06070
NZ_AP019516.1	Protein Homology	CDS	503068	504918	.	+	0	ID=cds-WP_071002295.1;Parent=gene-PKHYL_RS02565;Dbxref=Genbank:WP_071002295.1;Name=WP_071002295.1;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201777.1;locus_tag=PKHYL_RS02565;product=translational GTPase TypA;protein_id=WP_071002295.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	505192	505635	.	+	.	ID=gene-PKHYL_RS02570;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=PKHYL_RS02570;old_locus_tag=PKHYL_06080
NZ_AP019516.1	Protein Homology	CDS	505192	505635	.	+	0	ID=cds-WP_058025799.1;Parent=gene-PKHYL_RS02570;Dbxref=Genbank:WP_058025799.1;Name=WP_058025799.1;Ontology_term=GO:0034220,GO:0008381,GO:0016020;gbkey=CDS;gene=mscL;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512743.1;locus_tag=PKHYL_RS02570;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_058025799.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	505747	506187	.	-	.	ID=gene-PKHYL_RS02575;Name=PKHYL_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02575;old_locus_tag=PKHYL_06090
NZ_AP019516.1	Protein Homology	CDS	505747	506187	.	-	0	ID=cds-WP_071002294.1;Parent=gene-PKHYL_RS02575;Dbxref=Genbank:WP_071002294.1;Name=WP_071002294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442721.1;locus_tag=PKHYL_RS02575;product=hypothetical protein;protein_id=WP_071002294.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	506478	507408	.	-	.	ID=gene-PKHYL_RS02580;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=pseudogene;locus_tag=PKHYL_RS02580;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	506478	507408	.	-	0	ID=cds-PKHYL_RS02580;Parent=gene-PKHYL_RS02580;Note=frameshifted;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201774.1;locus_tag=PKHYL_RS02580;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	507464	510000	.	-	.	ID=gene-PKHYL_RS02585;Name=PKHYL_RS02585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02585;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	507464	510000	.	-	0	ID=cds-PKHYL_RS02585;Parent=gene-PKHYL_RS02585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512746.1;locus_tag=PKHYL_RS02585;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	510381	511933	.	-	.	ID=gene-PKHYL_RS02590;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=pseudogene;locus_tag=PKHYL_RS02590;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	510381	511933	.	-	0	ID=cds-PKHYL_RS02590;Parent=gene-PKHYL_RS02590;Note=frameshifted;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279651.1;locus_tag=PKHYL_RS02590;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	511996	512820	.	-	.	ID=gene-PKHYL_RS02595;Name=PKHYL_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02595;old_locus_tag=PKHYL_06170
NZ_AP019516.1	Protein Homology	CDS	511996	512820	.	-	0	ID=cds-WP_093067765.1;Parent=gene-PKHYL_RS02595;Dbxref=Genbank:WP_093067765.1;Name=WP_093067765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201771.1;locus_tag=PKHYL_RS02595;product=3'-5' exonuclease;protein_id=WP_093067765.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	512848	513804	.	-	.	ID=gene-PKHYL_RS02600;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=PKHYL_RS02600;old_locus_tag=PKHYL_06180
NZ_AP019516.1	Protein Homology	CDS	512848	513804	.	-	0	ID=cds-WP_186475426.1;Parent=gene-PKHYL_RS02600;Dbxref=Genbank:WP_186475426.1;Name=WP_186475426.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512749.1;locus_tag=PKHYL_RS02600;product=cysteine synthase CysM;protein_id=WP_186475426.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	514378	514941	.	+	.	ID=gene-PKHYL_RS02605;Name=PKHYL_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02605;old_locus_tag=PKHYL_06200
NZ_AP019516.1	GeneMarkS-2+	CDS	514378	514941	.	+	0	ID=cds-WP_240365906.1;Parent=gene-PKHYL_RS02605;Dbxref=Genbank:WP_240365906.1;Name=WP_240365906.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02605;product=hypothetical protein;protein_id=WP_240365906.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	515217	515902	.	+	.	ID=gene-PKHYL_RS02610;Name=PKHYL_RS02610;end_range=515902,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02610;old_locus_tag=PKHYL_06210;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	515217	515902	.	+	0	ID=cds-PKHYL_RS02610;Parent=gene-PKHYL_RS02610;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=515902,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=PKHYL_RS02610;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	516761	517843	.	+	.	ID=gene-PKHYL_RS02615;Name=PKHYL_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02615
NZ_AP019516.1	Protein Homology	CDS	516761	517843	.	+	0	ID=cds-WP_240366483.1;Parent=gene-PKHYL_RS02615;Dbxref=Genbank:WP_240366483.1;Name=WP_240366483.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF013767.2;locus_tag=PKHYL_RS02615;product=Hpt domain-containing protein;protein_id=WP_240366483.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	518331	519144	.	+	.	ID=gene-PKHYL_RS02620;Name=PKHYL_RS02620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02620;old_locus_tag=PKHYL_06230;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	518331	519144	.	+	0	ID=cds-PKHYL_RS02620;Parent=gene-PKHYL_RS02620;Note=frameshifted;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512751.1;locus_tag=PKHYL_RS02620;product=crotonase/enoyl-CoA hydratase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	519438	520697	.	+	.	ID=gene-PKHYL_RS02625;Name=PKHYL_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02625;old_locus_tag=PKHYL_06250
NZ_AP019516.1	Protein Homology	CDS	519438	520697	.	+	0	ID=cds-WP_240365907.1;Parent=gene-PKHYL_RS02625;Dbxref=Genbank:WP_240365907.1;Name=WP_240365907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512752.1;locus_tag=PKHYL_RS02625;product=multidrug effflux MFS transporter;protein_id=WP_240365907.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	521019	521891	.	+	.	ID=gene-PKHYL_RS02630;Name=PKHYL_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02630;old_locus_tag=PKHYL_06260
NZ_AP019516.1	Protein Homology	CDS	521019	521891	.	+	0	ID=cds-WP_240365908.1;Parent=gene-PKHYL_RS02630;Dbxref=Genbank:WP_240365908.1;Name=WP_240365908.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=PKHYL_RS02630;product=transporter substrate-binding domain-containing protein;protein_id=WP_240365908.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	521973	522221	.	+	.	ID=gene-PKHYL_RS02635;Name=PKHYL_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02635;old_locus_tag=PKHYL_06270
NZ_AP019516.1	GeneMarkS-2+	CDS	521973	522221	.	+	0	ID=cds-WP_240365909.1;Parent=gene-PKHYL_RS02635;Dbxref=Genbank:WP_240365909.1;Name=WP_240365909.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02635;product=hypothetical protein;protein_id=WP_240365909.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	522229	523122	.	+	.	ID=gene-PKHYL_RS02640;Name=PKHYL_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02640;old_locus_tag=PKHYL_06280
NZ_AP019516.1	GeneMarkS-2+	CDS	522229	523122	.	+	0	ID=cds-WP_240365910.1;Parent=gene-PKHYL_RS02640;Dbxref=Genbank:WP_240365910.1;Name=WP_240365910.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02640;product=hypothetical protein;protein_id=WP_240365910.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	523116	524180	.	+	.	ID=gene-PKHYL_RS02645;Name=PKHYL_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02645;old_locus_tag=PKHYL_06290
NZ_AP019516.1	Protein Homology	CDS	523116	524180	.	+	0	ID=cds-WP_240365911.1;Parent=gene-PKHYL_RS02645;Dbxref=Genbank:WP_240365911.1;Name=WP_240365911.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=PKHYL_RS02645;product=ATP-binding protein;protein_id=WP_240365911.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	524243	524605	.	+	.	ID=gene-PKHYL_RS02650;Name=PKHYL_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02650;old_locus_tag=PKHYL_06300
NZ_AP019516.1	Protein Homology	CDS	524243	524605	.	+	0	ID=cds-WP_058025789.1;Parent=gene-PKHYL_RS02650;Dbxref=Genbank:WP_058025789.1;Name=WP_058025789.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512755.1;locus_tag=PKHYL_RS02650;product=response regulator;protein_id=WP_058025789.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	524636	525085	.	+	.	ID=gene-PKHYL_RS02655;Name=PKHYL_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02655;old_locus_tag=PKHYL_06310
NZ_AP019516.1	Protein Homology	CDS	524636	525085	.	+	0	ID=cds-WP_240365912.1;Parent=gene-PKHYL_RS02655;Dbxref=Genbank:WP_240365912.1;Name=WP_240365912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512756.1;locus_tag=PKHYL_RS02655;product=chemotaxis protein CheX;protein_id=WP_240365912.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	525124	525573	.	+	.	ID=gene-PKHYL_RS02660;Name=PKHYL_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02660;old_locus_tag=PKHYL_06320
NZ_AP019516.1	Protein Homology	CDS	525124	525573	.	+	0	ID=cds-WP_093067793.1;Parent=gene-PKHYL_RS02660;Dbxref=Genbank:WP_093067793.1;Name=WP_093067793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512757.1;locus_tag=PKHYL_RS02660;product=chemotaxis protein CheX;protein_id=WP_093067793.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	525969	526754	.	+	.	ID=gene-PKHYL_RS02665;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=PKHYL_RS02665;old_locus_tag=PKHYL_06330
NZ_AP019516.1	Protein Homology	CDS	525969	526754	.	+	0	ID=cds-WP_186475105.1;Parent=gene-PKHYL_RS02665;Dbxref=Genbank:WP_186475105.1;Name=WP_186475105.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279657.1;locus_tag=PKHYL_RS02665;product=30S ribosomal protein S2;protein_id=WP_186475105.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	527116	527997	.	+	.	ID=gene-PKHYL_RS02670;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=PKHYL_RS02670;old_locus_tag=PKHYL_06340
NZ_AP019516.1	Protein Homology	CDS	527116	527997	.	+	0	ID=cds-WP_240365913.1;Parent=gene-PKHYL_RS02670;Dbxref=Genbank:WP_240365913.1;Name=WP_240365913.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201759.1;locus_tag=PKHYL_RS02670;product=translation elongation factor Ts;protein_id=WP_240365913.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	528191	528943	.	-	.	ID=gene-PKHYL_RS02675;Name=PKHYL_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02675;old_locus_tag=PKHYL_06350
NZ_AP019516.1	Protein Homology	CDS	528191	528943	.	-	0	ID=cds-WP_240365914.1;Parent=gene-PKHYL_RS02675;Dbxref=Genbank:WP_240365914.1;Name=WP_240365914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672243.1;locus_tag=PKHYL_RS02675;product=lytic transglycosylase domain-containing protein;protein_id=WP_240365914.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	529508	530197	.	-	.	ID=gene-PKHYL_RS02680;Name=PKHYL_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02680;old_locus_tag=PKHYL_06360
NZ_AP019516.1	Protein Homology	CDS	529508	530197	.	-	0	ID=cds-WP_240365915.1;Parent=gene-PKHYL_RS02680;Dbxref=Genbank:WP_240365915.1;Name=WP_240365915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201757.1;locus_tag=PKHYL_RS02680;product=LrgB family protein;protein_id=WP_240365915.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	530214	530348	.	-	.	ID=gene-PKHYL_RS17065;Name=PKHYL_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17065
NZ_AP019516.1	GeneMarkS-2+	CDS	530214	530348	.	-	0	ID=cds-WP_269778227.1;Parent=gene-PKHYL_RS17065;Dbxref=Genbank:WP_269778227.1;Name=WP_269778227.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17065;product=hypothetical protein;protein_id=WP_269778227.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	530416	530589	.	-	.	ID=gene-PKHYL_RS02685;Name=PKHYL_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02685;old_locus_tag=PKHYL_06370
NZ_AP019516.1	GeneMarkS-2+	CDS	530416	530589	.	-	0	ID=cds-WP_240365916.1;Parent=gene-PKHYL_RS02685;Dbxref=Genbank:WP_240365916.1;Name=WP_240365916.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02685;product=hypothetical protein;protein_id=WP_240365916.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	530998	532431	.	-	.	ID=gene-PKHYL_RS02690;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=PKHYL_RS02690;old_locus_tag=PKHYL_06380
NZ_AP019516.1	Protein Homology	CDS	530998	532431	.	-	0	ID=cds-WP_240365917.1;Parent=gene-PKHYL_RS02690;Dbxref=Genbank:WP_240365917.1;Name=WP_240365917.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201755.1;locus_tag=PKHYL_RS02690;product=GTPase HflX;protein_id=WP_240365917.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	532739	533539	.	+	.	ID=gene-PKHYL_RS02695;Name=PKHYL_RS02695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02695;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	532739	533539	.	+	0	ID=cds-PKHYL_RS02695;Parent=gene-PKHYL_RS02695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201754.1;locus_tag=PKHYL_RS02695;product=lysophospholipid acyltransferase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	533673	534713	.	-	.	ID=gene-PKHYL_RS02700;Name=PKHYL_RS02700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02700;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	533673	534713	.	-	0	ID=cds-PKHYL_RS02700;Parent=gene-PKHYL_RS02700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442737.1;locus_tag=PKHYL_RS02700;product=aldo/keto reductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	534761	535257	.	-	.	ID=gene-PKHYL_RS02705;Name=PKHYL_RS02705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02705;old_locus_tag=PKHYL_06440;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	534761	535257	.	-	0	ID=cds-PKHYL_RS02705;Parent=gene-PKHYL_RS02705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442738.1;locus_tag=PKHYL_RS02705;product=peptidylprolyl isomerase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	535500	535754	.	+	.	ID=gene-PKHYL_RS02710;Name=PKHYL_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02710;old_locus_tag=PKHYL_06450
NZ_AP019516.1	Protein Homology	CDS	535500	535754	.	+	0	ID=cds-WP_240366484.1;Parent=gene-PKHYL_RS02710;Dbxref=Genbank:WP_240366484.1;Name=WP_240366484.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012534.2;locus_tag=PKHYL_RS02710;product=hypothetical protein;protein_id=WP_240366484.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	535790	536086	.	+	.	ID=gene-PKHYL_RS02715;Name=PKHYL_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02715;old_locus_tag=PKHYL_06460
NZ_AP019516.1	Protein Homology	CDS	535790	536086	.	+	0	ID=cds-WP_240365918.1;Parent=gene-PKHYL_RS02715;Dbxref=Genbank:WP_240365918.1;Name=WP_240365918.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018644.2;locus_tag=PKHYL_RS02715;product=DUF1294 domain-containing protein;protein_id=WP_240365918.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	536107	536589	.	+	.	ID=gene-PKHYL_RS02720;Name=PKHYL_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02720;old_locus_tag=PKHYL_06470
NZ_AP019516.1	GeneMarkS-2+	CDS	536107	536589	.	+	0	ID=cds-WP_240365919.1;Parent=gene-PKHYL_RS02720;Dbxref=Genbank:WP_240365919.1;Name=WP_240365919.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02720;product=hypothetical protein;protein_id=WP_240365919.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	536758	536919	.	+	.	ID=gene-PKHYL_RS02725;Name=PKHYL_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02725;old_locus_tag=PKHYL_06480
NZ_AP019516.1	Protein Homology	CDS	536758	536919	.	+	0	ID=cds-WP_240365920.1;Parent=gene-PKHYL_RS02725;Dbxref=Genbank:WP_240365920.1;Name=WP_240365920.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01443.1;locus_tag=PKHYL_RS02725;product=HINT domain-containing protein;protein_id=WP_240365920.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	537049	537698	.	-	.	ID=gene-PKHYL_RS02730;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=pseudogene;locus_tag=PKHYL_RS02730;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	537049	537698	.	-	0	ID=cds-PKHYL_RS02730;Parent=gene-PKHYL_RS02730;Note=frameshifted;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201749.1;locus_tag=PKHYL_RS02730;product=signal peptidase II;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	537691	540551	.	-	.	ID=gene-PKHYL_RS02735;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=pseudogene;locus_tag=PKHYL_RS02735;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	537691	540551	.	-	0	ID=cds-PKHYL_RS02735;Parent=gene-PKHYL_RS02735;Note=frameshifted;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961109.1;locus_tag=PKHYL_RS02735;product=isoleucine--tRNA ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	541005	541562	.	-	.	ID=gene-PKHYL_RS02740;Name=PKHYL_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02740;old_locus_tag=PKHYL_06540
NZ_AP019516.1	Protein Homology	CDS	541005	541562	.	-	0	ID=cds-WP_240365921.1;Parent=gene-PKHYL_RS02740;Dbxref=Genbank:WP_240365921.1;Name=WP_240365921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442744.1;locus_tag=PKHYL_RS02740;product=protein disulfide oxidoreductase;protein_id=WP_240365921.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	541670	542914	.	-	.	ID=gene-PKHYL_RS02745;Name=PKHYL_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02745;old_locus_tag=PKHYL_06550
NZ_AP019516.1	Protein Homology	CDS	541670	542914	.	-	0	ID=cds-WP_240365922.1;Parent=gene-PKHYL_RS02745;Dbxref=Genbank:WP_240365922.1;Name=WP_240365922.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012993.2;locus_tag=PKHYL_RS02745;product=carbon-nitrogen hydrolase family protein;protein_id=WP_240365922.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	542976	543305	.	-	.	ID=gene-PKHYL_RS02750;Name=PKHYL_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02750;old_locus_tag=PKHYL_06560
NZ_AP019516.1	GeneMarkS-2+	CDS	542976	543305	.	-	0	ID=cds-WP_240365923.1;Parent=gene-PKHYL_RS02750;Dbxref=Genbank:WP_240365923.1;Name=WP_240365923.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02750;product=hypothetical protein;protein_id=WP_240365923.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	543838	544467	.	+	.	ID=gene-PKHYL_RS02755;Name=PKHYL_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02755;old_locus_tag=PKHYL_06570
NZ_AP019516.1	Protein Homology	CDS	543838	544467	.	+	0	ID=cds-WP_186475091.1;Parent=gene-PKHYL_RS02755;Dbxref=Genbank:WP_186475091.1;Name=WP_186475091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394103.1;locus_tag=PKHYL_RS02755;product=BLUF domain-containing protein;protein_id=WP_186475091.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	544563	546003	.	-	.	ID=gene-PKHYL_RS02760;Name=PKHYL_RS02760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02760;old_locus_tag=PKHYL_06590;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	544563	546003	.	-	0	ID=cds-PKHYL_RS02760;Parent=gene-PKHYL_RS02760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279675.1;locus_tag=PKHYL_RS02760;product=FAD-binding oxidoreductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	546339	547565	.	+	.	ID=gene-PKHYL_RS02765;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=PKHYL_RS02765;old_locus_tag=PKHYL_06600
NZ_AP019516.1	Protein Homology	CDS	546339	547565	.	+	0	ID=cds-WP_240365924.1;Parent=gene-PKHYL_RS02765;Dbxref=Genbank:WP_240365924.1;Name=WP_240365924.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003663188.1;locus_tag=PKHYL_RS02765;product=phosphoglycerate dehydrogenase;protein_id=WP_240365924.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	547706	548778	.	-	.	ID=gene-PKHYL_RS02770;Name=PKHYL_RS02770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02770;old_locus_tag=PKHYL_06610;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	547706	548778	.	-	0	ID=cds-PKHYL_RS02770;Parent=gene-PKHYL_RS02770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442748.1;locus_tag=PKHYL_RS02770;product=rhodanese-related sulfurtransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	549041	549622	.	-	.	ID=gene-PKHYL_RS02775;Name=PKHYL_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02775;old_locus_tag=PKHYL_06630
NZ_AP019516.1	Protein Homology	CDS	549041	549622	.	-	0	ID=cds-WP_058025769.1;Parent=gene-PKHYL_RS02775;Dbxref=Genbank:WP_058025769.1;Name=WP_058025769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201739.1;locus_tag=PKHYL_RS02775;product=tetratricopeptide repeat protein;protein_id=WP_058025769.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	549990	550637	.	-	.	ID=gene-PKHYL_RS02780;Name=metW;gbkey=Gene;gene=metW;gene_biotype=pseudogene;locus_tag=PKHYL_RS02780;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	549990	550637	.	-	0	ID=cds-PKHYL_RS02780;Parent=gene-PKHYL_RS02780;Note=frameshifted;Ontology_term=GO:0009086;gbkey=CDS;gene=metW;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442749.1;locus_tag=PKHYL_RS02780;product=methionine biosynthesis protein MetW;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	550634	551986	.	-	.	ID=gene-PKHYL_RS02785;Name=PKHYL_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02785;old_locus_tag=PKHYL_06660
NZ_AP019516.1	Protein Homology	CDS	550634	551986	.	-	0	ID=cds-WP_240366485.1;Parent=gene-PKHYL_RS02785;Dbxref=Genbank:WP_240366485.1;Name=WP_240366485.1;Ontology_term=GO:0009058,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279682.1;locus_tag=PKHYL_RS02785;product=homoserine O-acetyltransferase;protein_id=WP_240366485.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	552430	553450	.	+	.	ID=gene-PKHYL_RS02790;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=pseudogene;locus_tag=PKHYL_RS02790;old_locus_tag=PKHYL_06670;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	552430	553450	.	+	0	ID=cds-PKHYL_RS02790;Parent=gene-PKHYL_RS02790;Note=frameshifted;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201736.1;locus_tag=PKHYL_RS02790;product=ferrochelatase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	553566	553916	.	-	.	ID=gene-PKHYL_RS02795;Name=PKHYL_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02795;old_locus_tag=PKHYL_06690
NZ_AP019516.1	Protein Homology	CDS	553566	553916	.	-	0	ID=cds-WP_071002267.1;Parent=gene-PKHYL_RS02795;Dbxref=Genbank:WP_071002267.1;Name=WP_071002267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442752.1;locus_tag=PKHYL_RS02795;product=hypothetical protein;protein_id=WP_071002267.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	554181	554408	.	-	.	ID=gene-PKHYL_RS02800;Name=PKHYL_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02800;old_locus_tag=PKHYL_06700
NZ_AP019516.1	GeneMarkS-2+	CDS	554181	554408	.	-	0	ID=cds-WP_240365925.1;Parent=gene-PKHYL_RS02800;Dbxref=Genbank:WP_240365925.1;Name=WP_240365925.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02800;product=hypothetical protein;protein_id=WP_240365925.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	554978	557867	.	-	.	ID=gene-PKHYL_RS02805;Name=polA;gbkey=Gene;gene=polA;gene_biotype=pseudogene;locus_tag=PKHYL_RS02805;old_locus_tag=PKHYL_06720;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	554978	557867	.	-	0	ID=cds-PKHYL_RS02805;Parent=gene-PKHYL_RS02805;Note=frameshifted;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672054.1;locus_tag=PKHYL_RS02805;product=DNA polymerase I;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	558181	558594	.	-	.	ID=gene-PKHYL_RS02810;Name=PKHYL_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02810;old_locus_tag=PKHYL_06730
NZ_AP019516.1	Protein Homology	CDS	558181	558594	.	-	0	ID=cds-WP_071002265.1;Parent=gene-PKHYL_RS02810;Dbxref=Genbank:WP_071002265.1;Name=WP_071002265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512788.1;locus_tag=PKHYL_RS02810;product=organic hydroperoxide resistance protein;protein_id=WP_071002265.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	558849	559751	.	+	.	ID=gene-PKHYL_RS02815;Name=PKHYL_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02815;old_locus_tag=PKHYL_06740
NZ_AP019516.1	GeneMarkS-2+	CDS	558849	559751	.	+	0	ID=cds-WP_240365926.1;Parent=gene-PKHYL_RS02815;Dbxref=Genbank:WP_240365926.1;Name=WP_240365926.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02815;product=hypothetical protein;protein_id=WP_240365926.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	559933	561526	.	+	.	ID=gene-PKHYL_RS02820;Name=PKHYL_RS02820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02820;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	559933	561526	.	+	0	ID=cds-PKHYL_RS02820;Parent=gene-PKHYL_RS02820;Note=frameshifted;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395735.1;locus_tag=PKHYL_RS02820;product=peptide chain release factor 3;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	561889	562743	.	+	.	ID=gene-PKHYL_RS02825;Name=PKHYL_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02825;old_locus_tag=PKHYL_06780
NZ_AP019516.1	Protein Homology	CDS	561889	562743	.	+	0	ID=cds-WP_083328872.1;Parent=gene-PKHYL_RS02825;Dbxref=Genbank:WP_083328872.1;Name=WP_083328872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201723.1;locus_tag=PKHYL_RS02825;product=DUF3298 and DUF4163 domain-containing protein;protein_id=WP_083328872.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	562860	563561	.	+	.	ID=gene-PKHYL_RS02830;Name=PKHYL_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02830;old_locus_tag=PKHYL_06790
NZ_AP019516.1	Protein Homology	CDS	562860	563561	.	+	0	ID=cds-WP_240365927.1;Parent=gene-PKHYL_RS02830;Dbxref=Genbank:WP_240365927.1;Name=WP_240365927.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF028007.2;locus_tag=PKHYL_RS02830;product=FHA domain-containing protein;protein_id=WP_240365927.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	563524	564069	.	+	.	ID=gene-PKHYL_RS02835;Name=PKHYL_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02835;old_locus_tag=PKHYL_06800
NZ_AP019516.1	GeneMarkS-2+	CDS	563524	564069	.	+	0	ID=cds-WP_240365928.1;Parent=gene-PKHYL_RS02835;Dbxref=Genbank:WP_240365928.1;Name=WP_240365928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02835;product=hypothetical protein;protein_id=WP_240365928.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	564307	565803	.	+	.	ID=gene-PKHYL_RS02840;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=PKHYL_RS02840;old_locus_tag=PKHYL_06810
NZ_AP019516.1	Protein Homology	CDS	564307	565803	.	+	0	ID=cds-WP_071002262.1;Parent=gene-PKHYL_RS02840;Dbxref=Genbank:WP_071002262.1;Name=WP_071002262.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201721.1;locus_tag=PKHYL_RS02840;product=anthranilate synthase component I;protein_id=WP_071002262.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	565998	566073	.	+	.	ID=gene-PKHYL_RS02845;Name=PKHYL_RS02845;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS02845;old_locus_tag=PKHYL_t00110
NZ_AP019516.1	tRNAscan-SE	tRNA	565998	566073	.	+	.	ID=rna-PKHYL_RS02845;Parent=gene-PKHYL_RS02845;anticodon=(pos:566031..566033);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS02845;product=tRNA-Thr
NZ_AP019516.1	tRNAscan-SE	exon	565998	566073	.	+	.	ID=exon-PKHYL_RS02845-1;Parent=rna-PKHYL_RS02845;anticodon=(pos:566031..566033);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS02845;product=tRNA-Thr
NZ_AP019516.1	RefSeq	gene	566141	566224	.	+	.	ID=gene-PKHYL_RS02850;Name=PKHYL_RS02850;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS02850;old_locus_tag=PKHYL_t00120
NZ_AP019516.1	tRNAscan-SE	tRNA	566141	566224	.	+	.	ID=rna-PKHYL_RS02850;Parent=gene-PKHYL_RS02850;anticodon=(pos:566175..566177);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS02850;product=tRNA-Tyr
NZ_AP019516.1	tRNAscan-SE	exon	566141	566224	.	+	.	ID=exon-PKHYL_RS02850-1;Parent=rna-PKHYL_RS02850;anticodon=(pos:566175..566177);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS02850;product=tRNA-Tyr
NZ_AP019516.1	RefSeq	gene	566310	566383	.	+	.	ID=gene-PKHYL_RS02855;Name=PKHYL_RS02855;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS02855;old_locus_tag=PKHYL_t00130
NZ_AP019516.1	tRNAscan-SE	tRNA	566310	566383	.	+	.	ID=rna-PKHYL_RS02855;Parent=gene-PKHYL_RS02855;anticodon=(pos:566342..566344);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS02855;product=tRNA-Gly
NZ_AP019516.1	tRNAscan-SE	exon	566310	566383	.	+	.	ID=exon-PKHYL_RS02855-1;Parent=rna-PKHYL_RS02855;anticodon=(pos:566342..566344);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS02855;product=tRNA-Gly
NZ_AP019516.1	RefSeq	gene	566487	566561	.	+	.	ID=gene-PKHYL_RS02860;Name=PKHYL_RS02860;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS02860;old_locus_tag=PKHYL_t00140
NZ_AP019516.1	tRNAscan-SE	tRNA	566487	566561	.	+	.	ID=rna-PKHYL_RS02860;Parent=gene-PKHYL_RS02860;anticodon=(pos:566519..566521);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS02860;product=tRNA-Thr
NZ_AP019516.1	tRNAscan-SE	exon	566487	566561	.	+	.	ID=exon-PKHYL_RS02860-1;Parent=rna-PKHYL_RS02860;anticodon=(pos:566519..566521);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS02860;product=tRNA-Thr
NZ_AP019516.1	RefSeq	gene	566773	567051	.	+	.	ID=gene-PKHYL_RS02865;Name=PKHYL_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02865
NZ_AP019516.1	Protein Homology	CDS	566773	567051	.	+	0	ID=cds-WP_240365929.1;Parent=gene-PKHYL_RS02865;Dbxref=Genbank:WP_240365929.1;Name=WP_240365929.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039999.1;locus_tag=PKHYL_RS02865;product=DUF6122 family protein;protein_id=WP_240365929.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	567364	568555	.	+	.	ID=gene-PKHYL_RS02870;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=PKHYL_RS02870;old_locus_tag=PKHYL_06830;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	567364	568555	.	+	0	ID=cds-PKHYL_RS02870;Parent=gene-PKHYL_RS02870;Note=frameshifted;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961077.1;locus_tag=PKHYL_RS02870;product=elongation factor Tu;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	568824	569351	.	+	.	ID=gene-PKHYL_RS02875;Name=PKHYL_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02875;old_locus_tag=PKHYL_06840
NZ_AP019516.1	Protein Homology	CDS	568824	569351	.	+	0	ID=cds-WP_071002259.1;Parent=gene-PKHYL_RS02875;Dbxref=Genbank:WP_071002259.1;Name=WP_071002259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444073.1;locus_tag=PKHYL_RS02875;product=peroxiredoxin;protein_id=WP_071002259.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	569642	570133	.	+	.	ID=gene-PKHYL_RS02880;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=PKHYL_RS02880;old_locus_tag=PKHYL_06850
NZ_AP019516.1	Protein Homology	CDS	569642	570133	.	+	0	ID=cds-WP_071002258.1;Parent=gene-PKHYL_RS02880;Dbxref=Genbank:WP_071002258.1;Name=WP_071002258.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=peptide-alanine-alpha-N-acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197133.1;locus_tag=PKHYL_RS02880;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_071002258.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	570213	570647	.	-	.	ID=gene-PKHYL_RS02885;Name=PKHYL_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02885;old_locus_tag=PKHYL_06860
NZ_AP019516.1	Protein Homology	CDS	570213	570647	.	-	0	ID=cds-WP_058023725.1;Parent=gene-PKHYL_RS02885;Dbxref=Genbank:WP_058023725.1;Name=WP_058023725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512795.1;locus_tag=PKHYL_RS02885;product=MerR family transcriptional regulator;protein_id=WP_058023725.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	570681	571495	.	-	.	ID=gene-PKHYL_RS02890;Name=aat;gbkey=Gene;gene=aat;gene_biotype=pseudogene;locus_tag=PKHYL_RS02890;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	570681	571495	.	-	0	ID=cds-PKHYL_RS02890;Parent=gene-PKHYL_RS02890;Note=frameshifted;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197135.1;locus_tag=PKHYL_RS02890;product=leucyl/phenylalanyl-tRNA--protein transferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	571505	572518	.	-	.	ID=gene-PKHYL_RS02895;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=PKHYL_RS02895;old_locus_tag=PKHYL_06880
NZ_AP019516.1	Protein Homology	CDS	571505	572518	.	-	0	ID=cds-WP_186475078.1;Parent=gene-PKHYL_RS02895;Dbxref=Genbank:WP_186475078.1;Name=WP_186475078.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512797.1;locus_tag=PKHYL_RS02895;product=thioredoxin-disulfide reductase;protein_id=WP_186475078.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	573480	574295	.	+	.	ID=gene-PKHYL_RS02900;Name=PKHYL_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02900;old_locus_tag=PKHYL_06890
NZ_AP019516.1	Protein Homology	CDS	573480	574295	.	+	0	ID=cds-WP_240365930.1;Parent=gene-PKHYL_RS02900;Dbxref=Genbank:WP_240365930.1;Name=WP_240365930.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024882.2;locus_tag=PKHYL_RS02900;product=DNA translocase FtsK 4TM domain-containing protein;protein_id=WP_240365930.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	574373	574555	.	+	.	ID=gene-PKHYL_RS02905;Name=PKHYL_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02905;old_locus_tag=PKHYL_06900
NZ_AP019516.1	GeneMarkS-2+	CDS	574373	574555	.	+	0	ID=cds-WP_240365931.1;Parent=gene-PKHYL_RS02905;Dbxref=Genbank:WP_240365931.1;Name=WP_240365931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02905;product=hypothetical protein;protein_id=WP_240365931.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	574548	576671	.	+	.	ID=gene-PKHYL_RS02910;Name=PKHYL_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02910;old_locus_tag=PKHYL_06910
NZ_AP019516.1	Protein Homology	CDS	574548	576671	.	+	0	ID=cds-WP_269778228.1;Parent=gene-PKHYL_RS02910;Dbxref=Genbank:WP_269778228.1;Name=WP_269778228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004945846.1;locus_tag=PKHYL_RS02910;product=DNA translocase FtsK;protein_id=WP_269778228.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	576888	577880	.	-	.	ID=gene-PKHYL_RS02915;Name=PKHYL_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02915;old_locus_tag=PKHYL_06920
NZ_AP019516.1	Protein Homology	CDS	576888	577880	.	-	0	ID=cds-WP_240365287.1-2;Parent=gene-PKHYL_RS02915;Dbxref=Genbank:WP_240365287.1;Name=WP_240365287.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=PKHYL_RS02915;product=IS30 family transposase;protein_id=WP_240365287.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	577965	578351	.	+	.	ID=gene-PKHYL_RS17070;Name=PKHYL_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17070;old_locus_tag=PKHYL_06930
NZ_AP019516.1	Protein Homology	CDS	577965	578351	.	+	0	ID=cds-WP_269778229.1;Parent=gene-PKHYL_RS17070;Dbxref=Genbank:WP_269778229.1;Name=WP_269778229.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013584.2;locus_tag=PKHYL_RS17070;product=amidase family protein;protein_id=WP_269778229.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	578281	579458	.	+	.	ID=gene-PKHYL_RS02920;Name=PKHYL_RS02920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02920;old_locus_tag=PKHYL_06940;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	578281	579458	.	+	0	ID=cds-PKHYL_RS02920;Parent=gene-PKHYL_RS02920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013584.2;locus_tag=PKHYL_RS02920;product=amidase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	579508	580279	.	-	.	ID=gene-PKHYL_RS02925;Name=PKHYL_RS02925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02925;old_locus_tag=PKHYL_06950;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	579508	580279	.	-	0	ID=cds-PKHYL_RS02925;Parent=gene-PKHYL_RS02925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442764.1;locus_tag=PKHYL_RS02925;product=class III extradiol ring-cleavage dioxygenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	580484	580973	.	-	.	ID=gene-PKHYL_RS02930;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=pseudogene;locus_tag=PKHYL_RS02930;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	580484	580973	.	-	0	ID=cds-PKHYL_RS02930;Parent=gene-PKHYL_RS02930;Note=frameshifted;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442765.1;locus_tag=PKHYL_RS02930;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	581063	581611	.	-	.	ID=gene-PKHYL_RS02935;Name=PKHYL_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02935;old_locus_tag=PKHYL_06980
NZ_AP019516.1	Protein Homology	CDS	581063	581611	.	-	0	ID=cds-WP_240365932.1;Parent=gene-PKHYL_RS02935;Dbxref=Genbank:WP_240365932.1;Name=WP_240365932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196498.1;locus_tag=PKHYL_RS02935;product=DUF421 domain-containing protein;protein_id=WP_240365932.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	581762	582247	.	-	.	ID=gene-PKHYL_RS02940;Name=PKHYL_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02940;old_locus_tag=PKHYL_06990
NZ_AP019516.1	Protein Homology	CDS	581762	582247	.	-	0	ID=cds-WP_240365933.1;Parent=gene-PKHYL_RS02940;Dbxref=Genbank:WP_240365933.1;Name=WP_240365933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196501.1;locus_tag=PKHYL_RS02940;product=ABZJ_00895 family protein;protein_id=WP_240365933.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	582400	583230	.	-	.	ID=gene-PKHYL_RS02945;Name=PKHYL_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02945;old_locus_tag=PKHYL_07000
NZ_AP019516.1	Protein Homology	CDS	582400	583230	.	-	0	ID=cds-WP_240365934.1;Parent=gene-PKHYL_RS02945;Dbxref=Genbank:WP_240365934.1;Name=WP_240365934.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF014200.2;locus_tag=PKHYL_RS02945;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_240365934.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	583314	584207	.	-	.	ID=gene-PKHYL_RS02950;Name=PKHYL_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02950;old_locus_tag=PKHYL_07010
NZ_AP019516.1	Protein Homology	CDS	583314	584207	.	-	0	ID=cds-WP_240365935.1;Parent=gene-PKHYL_RS02950;Dbxref=Genbank:WP_240365935.1;Name=WP_240365935.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF014200.2;locus_tag=PKHYL_RS02950;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_240365935.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	584189	584389	.	-	.	ID=gene-PKHYL_RS02955;Name=PKHYL_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02955
NZ_AP019516.1	GeneMarkS-2+	CDS	584189	584389	.	-	0	ID=cds-WP_240365936.1;Parent=gene-PKHYL_RS02955;Dbxref=Genbank:WP_240365936.1;Name=WP_240365936.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02955;product=hypothetical protein;protein_id=WP_240365936.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	584489	585095	.	-	.	ID=gene-PKHYL_RS02960;Name=PKHYL_RS02960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS02960;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	584489	585095	.	-	0	ID=cds-PKHYL_RS02960;Parent=gene-PKHYL_RS02960;Note=frameshifted;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196511.1;locus_tag=PKHYL_RS02960;product=3'-5' exonuclease;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	585130	587076	.	-	.	ID=gene-PKHYL_RS02965;Name=PKHYL_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02965;old_locus_tag=PKHYL_07030
NZ_AP019516.1	Protein Homology	CDS	585130	587076	.	-	0	ID=cds-WP_071002250.1;Parent=gene-PKHYL_RS02965;Dbxref=Genbank:WP_071002250.1;Name=WP_071002250.1;Ontology_term=GO:0008773;gbkey=CDS;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196514.1;locus_tag=PKHYL_RS02965;product=DUF294 nucleotidyltransferase-like domain-containing protein;protein_id=WP_071002250.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	587219	588450	.	-	.	ID=gene-PKHYL_RS02970;Name=dapC;gbkey=Gene;gene=dapC;gene_biotype=pseudogene;locus_tag=PKHYL_RS02970;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	587219	588450	.	-	0	ID=cds-PKHYL_RS02970;Parent=gene-PKHYL_RS02970;Note=frameshifted;Ontology_term=GO:0019877,GO:0009016;gbkey=CDS;gene=dapC;go_function=succinyldiaminopimelate transaminase activity|0009016||IEA;go_process=diaminopimelate biosynthetic process|0019877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196517.1;locus_tag=PKHYL_RS02970;product=succinyldiaminopimelate transaminase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	588704	589375	.	+	.	ID=gene-PKHYL_RS02975;Name=PKHYL_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02975;old_locus_tag=PKHYL_07060
NZ_AP019516.1	Protein Homology	CDS	588704	589375	.	+	0	ID=cds-WP_071002248.1;Parent=gene-PKHYL_RS02975;Dbxref=Genbank:WP_071002248.1;Name=WP_071002248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442772.1;locus_tag=PKHYL_RS02975;product=hypothetical protein;protein_id=WP_071002248.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	589411	592168	.	-	.	ID=gene-PKHYL_RS02980;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=pseudogene;locus_tag=PKHYL_RS02980;old_locus_tag=PKHYL_07070;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	589411	592168	.	-	0	ID=cds-PKHYL_RS02980;Parent=gene-PKHYL_RS02980;Note=frameshifted;Ontology_term=GO:0018177,GO:0008773;gbkey=CDS;gene=glnD;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;go_process=protein uridylylation|0018177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442773.1;locus_tag=PKHYL_RS02980;product=[protein-PII] uridylyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	592411	593157	.	-	.	ID=gene-PKHYL_RS02985;Name=map;gbkey=Gene;gene=map;gene_biotype=pseudogene;locus_tag=PKHYL_RS02985;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	592411	593157	.	-	0	ID=cds-PKHYL_RS02985;Parent=gene-PKHYL_RS02985;Note=frameshifted;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016657082.1;locus_tag=PKHYL_RS02985;product=type I methionyl aminopeptidase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	593922	594578	.	+	.	ID=gene-PKHYL_RS02990;Name=PKHYL_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02990;old_locus_tag=PKHYL_07110
NZ_AP019516.1	GeneMarkS-2+	CDS	593922	594578	.	+	0	ID=cds-WP_240365937.1;Parent=gene-PKHYL_RS02990;Dbxref=Genbank:WP_240365937.1;Name=WP_240365937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02990;product=hypothetical protein;protein_id=WP_240365937.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	594605	595213	.	+	.	ID=gene-PKHYL_RS02995;Name=PKHYL_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS02995;old_locus_tag=PKHYL_07120
NZ_AP019516.1	GeneMarkS-2+	CDS	594605	595213	.	+	0	ID=cds-WP_240365938.1;Parent=gene-PKHYL_RS02995;Dbxref=Genbank:WP_240365938.1;Name=WP_240365938.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS02995;product=hypothetical protein;protein_id=WP_240365938.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	595185	595706	.	+	.	ID=gene-PKHYL_RS03000;Name=PKHYL_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03000;old_locus_tag=PKHYL_07130
NZ_AP019516.1	Protein Homology	CDS	595185	595706	.	+	0	ID=cds-WP_240365939.1;Parent=gene-PKHYL_RS03000;Dbxref=Genbank:WP_240365939.1;Name=WP_240365939.1;Ontology_term=GO:0006457,GO:0051082,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: protein motif:HMM:NF015252.2;locus_tag=PKHYL_RS03000;product=lipase secretion chaperone;protein_id=WP_240365939.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	595880	596011	.	+	.	ID=gene-PKHYL_RS17075;Name=PKHYL_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17075
NZ_AP019516.1	GeneMarkS-2+	CDS	595880	596011	.	+	0	ID=cds-WP_269778230.1;Parent=gene-PKHYL_RS17075;Dbxref=Genbank:WP_269778230.1;Name=WP_269778230.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17075;product=hypothetical protein;protein_id=WP_269778230.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	596448	596936	.	+	.	ID=gene-PKHYL_RS03005;Name=PKHYL_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03005;old_locus_tag=PKHYL_07150
NZ_AP019516.1	Protein Homology	CDS	596448	596936	.	+	0	ID=cds-WP_240365940.1;Parent=gene-PKHYL_RS03005;Dbxref=Genbank:WP_240365940.1;Name=WP_240365940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442777.1;locus_tag=PKHYL_RS03005;product=META domain-containing protein;protein_id=WP_240365940.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	597093	598112	.	+	.	ID=gene-PKHYL_RS03010;Name=PKHYL_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03010;old_locus_tag=PKHYL_07160
NZ_AP019516.1	Protein Homology	CDS	597093	598112	.	+	0	ID=cds-WP_186475065.1;Parent=gene-PKHYL_RS03010;Dbxref=Genbank:WP_186475065.1;Name=WP_186475065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196535.1;locus_tag=PKHYL_RS03010;product=PD40 domain-containing protein;protein_id=WP_186475065.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	598376	598780	.	+	.	ID=gene-PKHYL_RS03015;Name=PKHYL_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03015;old_locus_tag=PKHYL_07170
NZ_AP019516.1	GeneMarkS-2+	CDS	598376	598780	.	+	0	ID=cds-WP_186475064.1;Parent=gene-PKHYL_RS03015;Dbxref=Genbank:WP_186475064.1;Name=WP_186475064.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03015;product=hypothetical protein;protein_id=WP_186475064.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	598796	598942	.	+	.	ID=gene-PKHYL_RS03020;Name=PKHYL_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03020
NZ_AP019516.1	Protein Homology	CDS	598796	598942	.	+	0	ID=cds-WP_186475063.1;Parent=gene-PKHYL_RS03020;Dbxref=Genbank:WP_186475063.1;Name=WP_186475063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279705.1;locus_tag=PKHYL_RS03020;product=DUF2256 domain-containing protein;protein_id=WP_186475063.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	599079	599366	.	+	.	ID=gene-PKHYL_RS03025;Name=PKHYL_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03025;old_locus_tag=PKHYL_07180
NZ_AP019516.1	GeneMarkS-2+	CDS	599079	599366	.	+	0	ID=cds-WP_240365941.1;Parent=gene-PKHYL_RS03025;Dbxref=Genbank:WP_240365941.1;Name=WP_240365941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03025;product=hypothetical protein;protein_id=WP_240365941.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	599469	599816	.	-	.	ID=gene-PKHYL_RS03030;Name=PKHYL_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03030;old_locus_tag=PKHYL_07190
NZ_AP019516.1	GeneMarkS-2+	CDS	599469	599816	.	-	0	ID=cds-WP_240365942.1;Parent=gene-PKHYL_RS03030;Dbxref=Genbank:WP_240365942.1;Name=WP_240365942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03030;product=hypothetical protein;protein_id=WP_240365942.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	599795	600475	.	-	.	ID=gene-PKHYL_RS03035;Name=PKHYL_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03035;old_locus_tag=PKHYL_07200
NZ_AP019516.1	GeneMarkS-2+	CDS	599795	600475	.	-	0	ID=cds-WP_240365943.1;Parent=gene-PKHYL_RS03035;Dbxref=Genbank:WP_240365943.1;Name=WP_240365943.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03035;product=hypothetical protein;protein_id=WP_240365943.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	600486	600869	.	-	.	ID=gene-PKHYL_RS03040;Name=PKHYL_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03040;old_locus_tag=PKHYL_07210
NZ_AP019516.1	GeneMarkS-2+	CDS	600486	600869	.	-	0	ID=cds-WP_240365944.1;Parent=gene-PKHYL_RS03040;Dbxref=Genbank:WP_240365944.1;Name=WP_240365944.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03040;product=hypothetical protein;protein_id=WP_240365944.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	601175	601423	.	-	.	ID=gene-PKHYL_RS03045;Name=PKHYL_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03045;old_locus_tag=PKHYL_07220
NZ_AP019516.1	GeneMarkS-2+	CDS	601175	601423	.	-	0	ID=cds-WP_240365945.1;Parent=gene-PKHYL_RS03045;Dbxref=Genbank:WP_240365945.1;Name=WP_240365945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03045;product=hypothetical protein;protein_id=WP_240365945.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	601443	605098	.	-	.	ID=gene-PKHYL_RS03050;Name=metH;gbkey=Gene;gene=metH;gene_biotype=pseudogene;locus_tag=PKHYL_RS03050;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	601443	605098	.	-	0	ID=cds-PKHYL_RS03050;Parent=gene-PKHYL_RS03050;Note=frameshifted;Ontology_term=GO:0009086,GO:0008270,GO:0008705;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004703133.1;locus_tag=PKHYL_RS03050;product=methionine synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	605913	606371	.	+	.	ID=gene-PKHYL_RS03055;Name=PKHYL_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03055;old_locus_tag=PKHYL_07270
NZ_AP019516.1	Protein Homology	CDS	605913	606371	.	+	0	ID=cds-WP_240365946.1;Parent=gene-PKHYL_RS03055;Dbxref=Genbank:WP_240365946.1;Name=WP_240365946.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014522.2;locus_tag=PKHYL_RS03055;product=fasciclin domain-containing protein;protein_id=WP_240365946.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	606796	607416	.	+	.	ID=gene-PKHYL_RS03060;Name=PKHYL_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03060;old_locus_tag=PKHYL_07290
NZ_AP019516.1	Protein Homology	CDS	606796	607416	.	+	0	ID=cds-WP_093069503.1;Parent=gene-PKHYL_RS03060;Dbxref=Genbank:WP_093069503.1;Name=WP_093069503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512819.1;locus_tag=PKHYL_RS03060;product=fasciclin domain-containing protein;protein_id=WP_093069503.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	607636	609173	.	-	.	ID=gene-PKHYL_RS03065;Name=PKHYL_RS03065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03065;old_locus_tag=PKHYL_07300;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	607636	609173	.	-	0	ID=cds-PKHYL_RS03065;Parent=gene-PKHYL_RS03065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196574.1;locus_tag=PKHYL_RS03065;product=alanine/glycine:cation symporter family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	610191	610817	.	+	.	ID=gene-PKHYL_RS03070;Name=PKHYL_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03070;old_locus_tag=PKHYL_07320
NZ_AP019516.1	Protein Homology	CDS	610191	610817	.	+	0	ID=cds-WP_071002235.1;Parent=gene-PKHYL_RS03070;Dbxref=Genbank:WP_071002235.1;Name=WP_071002235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442783.1;locus_tag=PKHYL_RS03070;product=LemA family protein;protein_id=WP_071002235.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	610934	612122	.	+	.	ID=gene-PKHYL_RS17080;Name=PKHYL_RS17080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17080;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	610934	612122	.	+	0	ID=cds-PKHYL_RS17080;Parent=gene-PKHYL_RS17080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196578.1;locus_tag=PKHYL_RS17080;product=TPM domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	612221	612658	.	+	.	ID=gene-PKHYL_RS03080;Name=PKHYL_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03080;old_locus_tag=PKHYL_07350
NZ_AP019516.1	Protein Homology	CDS	612221	612658	.	+	0	ID=cds-WP_240365947.1;Parent=gene-PKHYL_RS03080;Dbxref=Genbank:WP_240365947.1;Name=WP_240365947.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016424.2;locus_tag=PKHYL_RS03080;product=TPM domain-containing protein;protein_id=WP_240365947.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	612914	613909	.	+	.	ID=gene-PKHYL_RS03085;Name=PKHYL_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03085;old_locus_tag=PKHYL_07360
NZ_AP019516.1	Protein Homology	CDS	612914	613909	.	+	0	ID=cds-WP_071002232.1;Parent=gene-PKHYL_RS03085;Dbxref=Genbank:WP_071002232.1;Name=WP_071002232.1;Ontology_term=GO:0006146,GO:0000034;gbkey=CDS;go_function=adenine deaminase activity|0000034||IEA;go_process=adenine catabolic process|0006146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512824.1;locus_tag=PKHYL_RS03085;product=adenosine deaminase;protein_id=WP_071002232.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	614042	614842	.	-	.	ID=gene-PKHYL_RS03090;Name=PKHYL_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03090;old_locus_tag=PKHYL_07370
NZ_AP019516.1	Protein Homology	CDS	614042	614842	.	-	0	ID=cds-WP_186475053.1;Parent=gene-PKHYL_RS03090;Dbxref=Genbank:WP_186475053.1;Name=WP_186475053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196585.1;locus_tag=PKHYL_RS03090;product=NAD-dependent deacylase;protein_id=WP_186475053.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	614878	615039	.	+	.	ID=gene-PKHYL_RS03095;Name=PKHYL_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03095
NZ_AP019516.1	GeneMarkS-2+	CDS	614878	615039	.	+	0	ID=cds-WP_240365948.1;Parent=gene-PKHYL_RS03095;Dbxref=Genbank:WP_240365948.1;Name=WP_240365948.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03095;product=hypothetical protein;protein_id=WP_240365948.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	615066	615239	.	+	.	ID=gene-PKHYL_RS03100;Name=PKHYL_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03100;old_locus_tag=PKHYL_07380
NZ_AP019516.1	GeneMarkS-2+	CDS	615066	615239	.	+	0	ID=cds-WP_240365949.1;Parent=gene-PKHYL_RS03100;Dbxref=Genbank:WP_240365949.1;Name=WP_240365949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03100;product=hypothetical protein;protein_id=WP_240365949.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	615509	615585	.	-	.	ID=gene-PKHYL_RS03105;Name=PKHYL_RS03105;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS03105;old_locus_tag=PKHYL_t00150
NZ_AP019516.1	tRNAscan-SE	tRNA	615509	615585	.	-	.	ID=rna-PKHYL_RS03105;Parent=gene-PKHYL_RS03105;anticodon=(pos:complement(615549..615551));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS03105;product=tRNA-Arg
NZ_AP019516.1	tRNAscan-SE	exon	615509	615585	.	-	.	ID=exon-PKHYL_RS03105-1;Parent=rna-PKHYL_RS03105;anticodon=(pos:complement(615549..615551));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS03105;product=tRNA-Arg
NZ_AP019516.1	RefSeq	gene	615954	616595	.	+	.	ID=gene-PKHYL_RS03110;Name=PKHYL_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03110;old_locus_tag=PKHYL_07390
NZ_AP019516.1	Protein Homology	CDS	615954	616595	.	+	0	ID=cds-WP_240365950.1;Parent=gene-PKHYL_RS03110;Dbxref=Genbank:WP_240365950.1;Name=WP_240365950.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196587.1;locus_tag=PKHYL_RS03110;product=c-type cytochrome;protein_id=WP_240365950.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	616896	617857	.	+	.	ID=gene-PKHYL_RS03115;Name=PKHYL_RS03115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03115;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	616896	617857	.	+	0	ID=cds-PKHYL_RS03115;Parent=gene-PKHYL_RS03115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019671884.1;locus_tag=PKHYL_RS03115;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	617887	618660	.	+	.	ID=gene-PKHYL_RS03120;Name=PKHYL_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03120;old_locus_tag=PKHYL_07420
NZ_AP019516.1	Protein Homology	CDS	617887	618660	.	+	0	ID=cds-WP_071003675.1;Parent=gene-PKHYL_RS03120;Dbxref=Genbank:WP_071003675.1;Name=WP_071003675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108116.1;locus_tag=PKHYL_RS03120;product=ABC transporter permease;protein_id=WP_071003675.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	618745	619614	.	+	.	ID=gene-PKHYL_RS03125;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=PKHYL_RS03125;old_locus_tag=PKHYL_07430
NZ_AP019516.1	Protein Homology	CDS	618745	619614	.	+	0	ID=cds-WP_071002227.1;Parent=gene-PKHYL_RS03125;Dbxref=Genbank:WP_071002227.1;Name=WP_071002227.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512830.1;locus_tag=PKHYL_RS03125;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_071002227.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	619731	621446	.	-	.	ID=gene-PKHYL_RS03130;Name=PKHYL_RS03130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03130;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	619731	621446	.	-	0	ID=cds-PKHYL_RS03130;Parent=gene-PKHYL_RS03130;Note=frameshifted;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA editing activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512831.1;locus_tag=PKHYL_RS03130;product=proline--tRNA ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	622041	622784	.	+	.	ID=gene-PKHYL_RS03135;Name=PKHYL_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03135;old_locus_tag=PKHYL_07460
NZ_AP019516.1	Protein Homology	CDS	622041	622784	.	+	0	ID=cds-WP_240365951.1;Parent=gene-PKHYL_RS03135;Dbxref=Genbank:WP_240365951.1;Name=WP_240365951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442793.1;locus_tag=PKHYL_RS03135;product=DUF4230 domain-containing protein;protein_id=WP_240365951.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	622786	622899	.	-	.	ID=gene-PKHYL_RS03140;Name=PKHYL_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03140
NZ_AP019516.1	GeneMarkS-2+	CDS	622786	622899	.	-	0	ID=cds-WP_240365952.1;Parent=gene-PKHYL_RS03140;Dbxref=Genbank:WP_240365952.1;Name=WP_240365952.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03140;product=FAD-binding domain-containing protein;protein_id=WP_240365952.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	622901	623386	.	-	.	ID=gene-PKHYL_RS03145;Name=PKHYL_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03145;old_locus_tag=PKHYL_07470
NZ_AP019516.1	Protein Homology	CDS	622901	623386	.	-	0	ID=cds-WP_240365953.1;Parent=gene-PKHYL_RS03145;Dbxref=Genbank:WP_240365953.1;Name=WP_240365953.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015406.2;locus_tag=PKHYL_RS03145;product=hypothetical protein;protein_id=WP_240365953.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	623346	623708	.	-	.	ID=gene-PKHYL_RS03150;Name=PKHYL_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03150
NZ_AP019516.1	GeneMarkS-2+	CDS	623346	623708	.	-	0	ID=cds-WP_240365954.1;Parent=gene-PKHYL_RS03150;Dbxref=Genbank:WP_240365954.1;Name=WP_240365954.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03150;product=hypothetical protein;protein_id=WP_240365954.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	623653	624405	.	-	.	ID=gene-PKHYL_RS03155;Name=PKHYL_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03155;old_locus_tag=PKHYL_07480
NZ_AP019516.1	Protein Homology	CDS	623653	624405	.	-	0	ID=cds-WP_240365955.1;Parent=gene-PKHYL_RS03155;Dbxref=Genbank:WP_240365955.1;Name=WP_240365955.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013071.2;locus_tag=PKHYL_RS03155;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_240365955.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	624607	625278	.	+	.	ID=gene-PKHYL_RS03160;Name=PKHYL_RS03160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03160;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	624607	625278	.	+	0	ID=cds-PKHYL_RS03160;Parent=gene-PKHYL_RS03160;Note=frameshifted;Ontology_term=GO:0000162,GO:0004640;gbkey=CDS;go_function=phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196616.1;locus_tag=PKHYL_RS03160;product=phosphoribosylanthranilate isomerase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	625414	626688	.	+	.	ID=gene-PKHYL_RS03165;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=PKHYL_RS03165;old_locus_tag=PKHYL_07510
NZ_AP019516.1	Protein Homology	CDS	625414	626688	.	+	0	ID=cds-WP_240365956.1;Parent=gene-PKHYL_RS03165;Dbxref=Genbank:WP_240365956.1;Name=WP_240365956.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512835.1;locus_tag=PKHYL_RS03165;product=tryptophan synthase subunit beta;protein_id=WP_240365956.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	626829	627653	.	+	.	ID=gene-PKHYL_RS03170;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=PKHYL_RS03170;old_locus_tag=PKHYL_07520
NZ_AP019516.1	Protein Homology	CDS	626829	627653	.	+	0	ID=cds-WP_212563843.1;Parent=gene-PKHYL_RS03170;Dbxref=Genbank:WP_212563843.1;Name=WP_212563843.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960031.1;locus_tag=PKHYL_RS03170;product=tryptophan synthase subunit alpha;protein_id=WP_212563843.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	628138	629083	.	+	.	ID=gene-PKHYL_RS03175;Name=accD;gbkey=Gene;gene=accD;gene_biotype=pseudogene;locus_tag=PKHYL_RS03175;old_locus_tag=PKHYL_07540;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	628138	629083	.	+	0	ID=cds-PKHYL_RS03175;Parent=gene-PKHYL_RS03175;Note=frameshifted;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279733.1;locus_tag=PKHYL_RS03175;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	629270	630628	.	+	.	ID=gene-PKHYL_RS03180;Name=PKHYL_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03180;old_locus_tag=PKHYL_07550
NZ_AP019516.1	Protein Homology	CDS	629270	630628	.	+	0	ID=cds-WP_240365957.1;Parent=gene-PKHYL_RS03180;Dbxref=Genbank:WP_240365957.1;Name=WP_240365957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196638.1;locus_tag=PKHYL_RS03180;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_240365957.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	630877	631137	.	+	.	ID=gene-PKHYL_RS03185;Name=PKHYL_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03185;old_locus_tag=PKHYL_07560
NZ_AP019516.1	GeneMarkS-2+	CDS	630877	631137	.	+	0	ID=cds-WP_240365958.1;Parent=gene-PKHYL_RS03185;Dbxref=Genbank:WP_240365958.1;Name=WP_240365958.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03185;product=hypothetical protein;protein_id=WP_240365958.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	631134	631556	.	+	.	ID=gene-PKHYL_RS03190;Name=PKHYL_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03190;old_locus_tag=PKHYL_07570
NZ_AP019516.1	GeneMarkS-2+	CDS	631134	631556	.	+	0	ID=cds-WP_240365959.1;Parent=gene-PKHYL_RS03190;Dbxref=Genbank:WP_240365959.1;Name=WP_240365959.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03190;product=hypothetical protein;protein_id=WP_240365959.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	631553	632017	.	+	.	ID=gene-PKHYL_RS03195;Name=PKHYL_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03195;old_locus_tag=PKHYL_07580
NZ_AP019516.1	Protein Homology	CDS	631553	632017	.	+	0	ID=cds-WP_240365960.1;Parent=gene-PKHYL_RS03195;Dbxref=Genbank:WP_240365960.1;Name=WP_240365960.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: protein motif:HMM:NF016895.2;locus_tag=PKHYL_RS03195;product=SPOR domain-containing protein;protein_id=WP_240365960.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	632309	632740	.	+	.	ID=gene-PKHYL_RS03200;Name=PKHYL_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03200;old_locus_tag=PKHYL_07590
NZ_AP019516.1	Protein Homology	CDS	632309	632740	.	+	0	ID=cds-WP_240365961.1;Parent=gene-PKHYL_RS03200;Dbxref=Genbank:WP_240365961.1;Name=WP_240365961.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022337.2;locus_tag=PKHYL_RS03200;product=DUF2726 domain-containing protein;protein_id=WP_240365961.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	632901	633869	.	-	.	ID=gene-PKHYL_RS03205;Name=PKHYL_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03205;old_locus_tag=PKHYL_07600
NZ_AP019516.1	Protein Homology	CDS	632901	633869	.	-	0	ID=cds-WP_186475042.1;Parent=gene-PKHYL_RS03205;Dbxref=Genbank:WP_186475042.1;Name=WP_186475042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512841.1;locus_tag=PKHYL_RS03205;product=DUF1853 family protein;protein_id=WP_186475042.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	634022	634276	.	-	.	ID=gene-PKHYL_RS03210;Name=PKHYL_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03210;old_locus_tag=PKHYL_07620
NZ_AP019516.1	GeneMarkS-2+	CDS	634022	634276	.	-	0	ID=cds-WP_240365962.1;Parent=gene-PKHYL_RS03210;Dbxref=Genbank:WP_240365962.1;Name=WP_240365962.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03210;product=hypothetical protein;protein_id=WP_240365962.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	634482	634700	.	-	.	ID=gene-PKHYL_RS03215;Name=PKHYL_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03215;old_locus_tag=PKHYL_07630
NZ_AP019516.1	GeneMarkS-2+	CDS	634482	634700	.	-	0	ID=cds-WP_212563838.1;Parent=gene-PKHYL_RS03215;Dbxref=Genbank:WP_212563838.1;Name=WP_212563838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03215;product=hypothetical protein;protein_id=WP_212563838.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	634736	635041	.	-	.	ID=gene-PKHYL_RS03220;Name=PKHYL_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03220;old_locus_tag=PKHYL_07640
NZ_AP019516.1	Protein Homology	CDS	634736	635041	.	-	0	ID=cds-WP_201592207.1;Parent=gene-PKHYL_RS03220;Dbxref=Genbank:WP_201592207.1;Name=WP_201592207.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520703.1;locus_tag=PKHYL_RS03220;product=putative addiction module antidote protein;protein_id=WP_201592207.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	635038	635361	.	-	.	ID=gene-PKHYL_RS03225;Name=PKHYL_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03225;old_locus_tag=PKHYL_07650
NZ_AP019516.1	Protein Homology	CDS	635038	635361	.	-	0	ID=cds-WP_212563837.1;Parent=gene-PKHYL_RS03225;Dbxref=Genbank:WP_212563837.1;Name=WP_212563837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019671618.1;locus_tag=PKHYL_RS03225;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_212563837.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	635521	636012	.	-	.	ID=gene-PKHYL_RS03230;Name=PKHYL_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03230;old_locus_tag=PKHYL_07660
NZ_AP019516.1	Protein Homology	CDS	635521	636012	.	-	0	ID=cds-WP_240365963.1;Parent=gene-PKHYL_RS03230;Dbxref=Genbank:WP_240365963.1;Name=WP_240365963.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037202.2;locus_tag=PKHYL_RS03230;product=hypothetical protein;protein_id=WP_240365963.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	636039	636413	.	-	.	ID=gene-PKHYL_RS03235;Name=PKHYL_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03235;old_locus_tag=PKHYL_07670
NZ_AP019516.1	Protein Homology	CDS	636039	636413	.	-	0	ID=cds-WP_240365964.1;Parent=gene-PKHYL_RS03235;Dbxref=Genbank:WP_240365964.1;Name=WP_240365964.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037202.2;locus_tag=PKHYL_RS03235;product=hypothetical protein;protein_id=WP_240365964.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	636520	638747	.	-	.	ID=gene-PKHYL_RS03240;Name=PKHYL_RS03240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03240;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	636520	638747	.	-	0	ID=cds-PKHYL_RS03240;Parent=gene-PKHYL_RS03240;Note=frameshifted%3B internal stop;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004757106.1;locus_tag=PKHYL_RS03240;product=N-6 DNA methylase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	638845	639144	.	-	.	ID=gene-PKHYL_RS03245;Name=PKHYL_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03245;old_locus_tag=PKHYL_07710
NZ_AP019516.1	Protein Homology	CDS	638845	639144	.	-	0	ID=cds-WP_071002215.1;Parent=gene-PKHYL_RS03245;Dbxref=Genbank:WP_071002215.1;Name=WP_071002215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672466.1;locus_tag=PKHYL_RS03245;product=XRE family transcriptional regulator;protein_id=WP_071002215.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	639408	639746	.	-	.	ID=gene-PKHYL_RS03250;Name=PKHYL_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03250;old_locus_tag=PKHYL_07720
NZ_AP019516.1	GeneMarkS-2+	CDS	639408	639746	.	-	0	ID=cds-WP_240366574.1;Parent=gene-PKHYL_RS03250;Dbxref=Genbank:WP_240366574.1;Name=WP_240366574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03250;product=hypothetical protein;protein_id=WP_240366574.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	639688	640593	.	-	.	ID=gene-PKHYL_RS03255;Name=PKHYL_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03255;old_locus_tag=PKHYL_07730
NZ_AP019516.1	Protein Homology	CDS	639688	640593	.	-	0	ID=cds-WP_240365965.1;Parent=gene-PKHYL_RS03255;Dbxref=Genbank:WP_240365965.1;Name=WP_240365965.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017826.2;locus_tag=PKHYL_RS03255;product=DUF927 domain-containing protein;protein_id=WP_240365965.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	640605	641909	.	-	.	ID=gene-PKHYL_RS03260;Name=PKHYL_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03260;old_locus_tag=PKHYL_07740
NZ_AP019516.1	Protein Homology	CDS	640605	641909	.	-	0	ID=cds-WP_240365966.1;Parent=gene-PKHYL_RS03260;Dbxref=Genbank:WP_240365966.1;Name=WP_240365966.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017826.2;locus_tag=PKHYL_RS03260;product=DUF927 domain-containing protein;protein_id=WP_240365966.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	642073	642444	.	-	.	ID=gene-PKHYL_RS03265;Name=PKHYL_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03265;old_locus_tag=PKHYL_07760
NZ_AP019516.1	GeneMarkS-2+	CDS	642073	642444	.	-	0	ID=cds-WP_240365967.1;Parent=gene-PKHYL_RS03265;Dbxref=Genbank:WP_240365967.1;Name=WP_240365967.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03265;product=hypothetical protein;protein_id=WP_240365967.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	642607	642969	.	-	.	ID=gene-PKHYL_RS03270;Name=PKHYL_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03270;old_locus_tag=PKHYL_07770
NZ_AP019516.1	GeneMarkS-2+	CDS	642607	642969	.	-	0	ID=cds-WP_240365968.1;Parent=gene-PKHYL_RS03270;Dbxref=Genbank:WP_240365968.1;Name=WP_240365968.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03270;product=hypothetical protein;protein_id=WP_240365968.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	642962	643237	.	-	.	ID=gene-PKHYL_RS03275;Name=PKHYL_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03275;old_locus_tag=PKHYL_07780
NZ_AP019516.1	Protein Homology	CDS	642962	643237	.	-	0	ID=cds-WP_071002211.1;Parent=gene-PKHYL_RS03275;Dbxref=Genbank:WP_071002211.1;Name=WP_071002211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196988.1;locus_tag=PKHYL_RS03275;product=hypothetical protein;protein_id=WP_071002211.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	643188	643526	.	-	.	ID=gene-PKHYL_RS03280;Name=PKHYL_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03280;old_locus_tag=PKHYL_07790
NZ_AP019516.1	Protein Homology	CDS	643188	643526	.	-	0	ID=cds-WP_240365969.1;Parent=gene-PKHYL_RS03280;Dbxref=Genbank:WP_240365969.1;Name=WP_240365969.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025456.2;locus_tag=PKHYL_RS03280;product=helix-turn-helix domain-containing protein;protein_id=WP_240365969.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	643562	643819	.	-	.	ID=gene-PKHYL_RS03285;Name=PKHYL_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03285;old_locus_tag=PKHYL_07800
NZ_AP019516.1	Protein Homology	CDS	643562	643819	.	-	0	ID=cds-WP_240365970.1;Parent=gene-PKHYL_RS03285;Dbxref=Genbank:WP_240365970.1;Name=WP_240365970.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017717.2;locus_tag=PKHYL_RS03285;product=hypothetical protein;protein_id=WP_240365970.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	644004	644546	.	-	.	ID=gene-PKHYL_RS03290;Name=PKHYL_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03290;old_locus_tag=PKHYL_07810
NZ_AP019516.1	GeneMarkS-2+	CDS	644004	644546	.	-	0	ID=cds-WP_240365971.1;Parent=gene-PKHYL_RS03290;Dbxref=Genbank:WP_240365971.1;Name=WP_240365971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03290;product=hypothetical protein;protein_id=WP_240365971.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	644512	644964	.	-	.	ID=gene-PKHYL_RS03295;Name=PKHYL_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03295;old_locus_tag=PKHYL_07820
NZ_AP019516.1	Protein Homology	CDS	644512	644964	.	-	0	ID=cds-WP_240365373.1-2;Parent=gene-PKHYL_RS03295;Dbxref=Genbank:WP_240365373.1;Name=WP_240365373.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF024752.2;locus_tag=PKHYL_RS03295;product=transposase;protein_id=WP_240365373.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	644924	645343	.	-	.	ID=gene-PKHYL_RS03300;Name=PKHYL_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03300;old_locus_tag=PKHYL_07830
NZ_AP019516.1	Protein Homology	CDS	644924	645343	.	-	0	ID=cds-WP_240365372.1-2;Parent=gene-PKHYL_RS03300;Dbxref=Genbank:WP_240365372.1;Name=WP_240365372.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025000.2;locus_tag=PKHYL_RS03300;product=transposase family protein;protein_id=WP_240365372.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	645778	648688	.	-	.	ID=gene-PKHYL_RS03305;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=pseudogene;locus_tag=PKHYL_RS03305;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	645778	648688	.	-	0	ID=cds-PKHYL_RS03305;Parent=gene-PKHYL_RS03305;Note=frameshifted;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997029.1;locus_tag=PKHYL_RS03305;product=excinuclease ABC subunit UvrA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	649361	650724	.	+	.	ID=gene-PKHYL_RS03310;Name=PKHYL_RS03310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03310;old_locus_tag=PKHYL_07880;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	649361	650724	.	+	0	ID=cds-PKHYL_RS03310;Parent=gene-PKHYL_RS03310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514279.1;locus_tag=PKHYL_RS03310;product=MFS transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	650810	651424	.	+	.	ID=gene-PKHYL_RS03315;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=PKHYL_RS03315;old_locus_tag=PKHYL_07900
NZ_AP019516.1	Protein Homology	CDS	650810	651424	.	+	0	ID=cds-WP_071002203.1;Parent=gene-PKHYL_RS03315;Dbxref=Genbank:WP_071002203.1;Name=WP_071002203.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514278.1;locus_tag=PKHYL_RS03315;product=single-stranded DNA-binding protein;protein_id=WP_071002203.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	651993	652985	.	+	.	ID=gene-PKHYL_RS03320;Name=PKHYL_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03320;old_locus_tag=PKHYL_07910
NZ_AP019516.1	Protein Homology	CDS	651993	652985	.	+	0	ID=cds-WP_240365287.1-3;Parent=gene-PKHYL_RS03320;Dbxref=Genbank:WP_240365287.1;Name=WP_240365287.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=PKHYL_RS03320;product=IS30 family transposase;protein_id=WP_240365287.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	653301	653975	.	+	.	ID=gene-PKHYL_RS03325;Name=PKHYL_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03325;old_locus_tag=PKHYL_07920
NZ_AP019516.1	GeneMarkS-2+	CDS	653301	653975	.	+	0	ID=cds-WP_071002202.1;Parent=gene-PKHYL_RS03325;Dbxref=Genbank:WP_071002202.1;Name=WP_071002202.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03325;product=hypothetical protein;protein_id=WP_071002202.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	654051	654338	.	+	.	ID=gene-PKHYL_RS03330;Name=PKHYL_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03330;old_locus_tag=PKHYL_07930
NZ_AP019516.1	Protein Homology	CDS	654051	654338	.	+	0	ID=cds-WP_240365972.1;Parent=gene-PKHYL_RS03330;Dbxref=Genbank:WP_240365972.1;Name=WP_240365972.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016807.2;locus_tag=PKHYL_RS03330;product=BLUF domain-containing protein;protein_id=WP_240365972.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	654380	654568	.	+	.	ID=gene-PKHYL_RS03335;Name=PKHYL_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03335;old_locus_tag=PKHYL_07940
NZ_AP019516.1	GeneMarkS-2+	CDS	654380	654568	.	+	0	ID=cds-WP_240365973.1;Parent=gene-PKHYL_RS03335;Dbxref=Genbank:WP_240365973.1;Name=WP_240365973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03335;product=hypothetical protein;protein_id=WP_240365973.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	654665	655062	.	+	.	ID=gene-PKHYL_RS03340;Name=PKHYL_RS03340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03340;old_locus_tag=PKHYL_07960;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	654665	655062	.	+	0	ID=cds-PKHYL_RS03340;Parent=gene-PKHYL_RS03340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016807.2;locus_tag=PKHYL_RS03340;product=BLUF domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	655517	655840	.	+	.	ID=gene-PKHYL_RS03345;Name=PKHYL_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03345;old_locus_tag=PKHYL_07970
NZ_AP019516.1	Protein Homology	CDS	655517	655840	.	+	0	ID=cds-WP_071002199.1;Parent=gene-PKHYL_RS03345;Dbxref=Genbank:WP_071002199.1;Name=WP_071002199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444129.1;locus_tag=PKHYL_RS03345;product=H-NS histone family protein;protein_id=WP_071002199.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	656082	656918	.	+	.	ID=gene-PKHYL_RS03350;Name=gspN;gbkey=Gene;gene=gspN;gene_biotype=protein_coding;locus_tag=PKHYL_RS03350;old_locus_tag=PKHYL_07980
NZ_AP019516.1	Protein Homology	CDS	656082	656918	.	+	0	ID=cds-WP_083328865.1;Parent=gene-PKHYL_RS03350;Dbxref=Genbank:WP_083328865.1;Name=WP_083328865.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspN;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201338.1;locus_tag=PKHYL_RS03350;product=type II secretion system protein N;protein_id=WP_083328865.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	656919	657110	.	+	.	ID=gene-PKHYL_RS03355;Name=PKHYL_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03355
NZ_AP019516.1	GeneMarkS-2+	CDS	656919	657110	.	+	0	ID=cds-WP_240365974.1;Parent=gene-PKHYL_RS03355;Dbxref=Genbank:WP_240365974.1;Name=WP_240365974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03355;product=hypothetical protein;protein_id=WP_240365974.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	657121	657591	.	+	.	ID=gene-PKHYL_RS03360;Name=PKHYL_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03360;old_locus_tag=PKHYL_07990
NZ_AP019516.1	GeneMarkS-2+	CDS	657121	657591	.	+	0	ID=cds-WP_240365975.1;Parent=gene-PKHYL_RS03360;Dbxref=Genbank:WP_240365975.1;Name=WP_240365975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03360;product=hypothetical protein;protein_id=WP_240365975.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	657591	657815	.	+	.	ID=gene-PKHYL_RS03365;Name=PKHYL_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03365;old_locus_tag=PKHYL_08000
NZ_AP019516.1	Protein Homology	CDS	657591	657815	.	+	0	ID=cds-WP_240366486.1;Parent=gene-PKHYL_RS03365;Dbxref=Genbank:WP_240366486.1;Name=WP_240366486.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036497.2;locus_tag=PKHYL_RS03365;product=PDZ domain-containing protein;protein_id=WP_240366486.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	657894	659435	.	+	.	ID=gene-PKHYL_RS03370;Name=PKHYL_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03370;old_locus_tag=PKHYL_08010
NZ_AP019516.1	Protein Homology	CDS	657894	659435	.	+	0	ID=cds-WP_240365976.1;Parent=gene-PKHYL_RS03370;Dbxref=Genbank:WP_240365976.1;Name=WP_240365976.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015891.2;locus_tag=PKHYL_RS03370;product=hypothetical protein;protein_id=WP_240365976.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	659378	659593	.	+	.	ID=gene-PKHYL_RS17085;Name=PKHYL_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17085;old_locus_tag=PKHYL_08020
NZ_AP019516.1	Protein Homology	CDS	659378	659593	.	+	0	ID=cds-WP_269778231.1;Parent=gene-PKHYL_RS17085;Dbxref=Genbank:WP_269778231.1;Name=WP_269778231.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012485.2;locus_tag=PKHYL_RS17085;product=hypothetical protein;protein_id=WP_269778231.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	659610	660152	.	+	.	ID=gene-PKHYL_RS03375;Name=PKHYL_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03375;old_locus_tag=PKHYL_08030
NZ_AP019516.1	Protein Homology	CDS	659610	660152	.	+	0	ID=cds-WP_269778232.1;Parent=gene-PKHYL_RS03375;Dbxref=Genbank:WP_269778232.1;Name=WP_269778232.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012485.2;locus_tag=PKHYL_RS03375;product=hypothetical protein;protein_id=WP_269778232.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	660665	661651	.	+	.	ID=gene-PKHYL_RS03380;Name=PKHYL_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03380;old_locus_tag=PKHYL_08040
NZ_AP019516.1	Protein Homology	CDS	660665	661651	.	+	0	ID=cds-WP_071002196.1;Parent=gene-PKHYL_RS03380;Dbxref=Genbank:WP_071002196.1;Name=WP_071002196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673275.1;locus_tag=PKHYL_RS03380;product=TatD family hydrolase;protein_id=WP_071002196.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	661810	662601	.	+	.	ID=gene-PKHYL_RS03385;Name=PKHYL_RS03385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03385;old_locus_tag=PKHYL_08060;partial=true;pseudo=true;start_range=.,661810
NZ_AP019516.1	Protein Homology	CDS	661810	662601	.	+	0	ID=cds-PKHYL_RS03385;Parent=gene-PKHYL_RS03385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280945.1;locus_tag=PKHYL_RS03385;partial=true;product=tRNA threonylcarbamoyladenosine dehydratase;pseudo=true;start_range=.,661810;transl_table=11
NZ_AP019516.1	RefSeq	gene	662623	663126	.	+	.	ID=gene-PKHYL_RS03390;Name=PKHYL_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03390;old_locus_tag=PKHYL_08070
NZ_AP019516.1	Protein Homology	CDS	662623	663126	.	+	0	ID=cds-WP_240365977.1;Parent=gene-PKHYL_RS03390;Dbxref=Genbank:WP_240365977.1;Name=WP_240365977.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013736.2;locus_tag=PKHYL_RS03390;product=GAF domain-containing protein;protein_id=WP_240365977.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	663108	663236	.	+	.	ID=gene-PKHYL_RS17090;Name=PKHYL_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17090;old_locus_tag=PKHYL_08080
NZ_AP019516.1	GeneMarkS-2+	CDS	663108	663236	.	+	0	ID=cds-WP_269778233.1;Parent=gene-PKHYL_RS17090;Dbxref=Genbank:WP_269778233.1;Name=WP_269778233.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17090;product=hypothetical protein;protein_id=WP_269778233.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	663233	663388	.	+	.	ID=gene-PKHYL_RS03395;Name=PKHYL_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03395;old_locus_tag=PKHYL_08090
NZ_AP019516.1	Protein Homology	CDS	663233	663388	.	+	0	ID=cds-WP_240365978.1;Parent=gene-PKHYL_RS03395;Dbxref=Genbank:WP_240365978.1;Name=WP_240365978.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012722.2;locus_tag=PKHYL_RS03395;product=hypothetical protein;protein_id=WP_240365978.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	663560	664399	.	+	.	ID=gene-PKHYL_RS03400;Name=PKHYL_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03400;old_locus_tag=PKHYL_08110
NZ_AP019516.1	Protein Homology	CDS	663560	664399	.	+	0	ID=cds-WP_240365979.1;Parent=gene-PKHYL_RS03400;Dbxref=Genbank:WP_240365979.1;Name=WP_240365979.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=PKHYL_RS03400;product=ATP-binding protein;protein_id=WP_240365979.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	664618	665190	.	-	.	ID=gene-PKHYL_RS03405;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=PKHYL_RS03405;old_locus_tag=PKHYL_08120
NZ_AP019516.1	Protein Homology	CDS	664618	665190	.	-	0	ID=cds-WP_058025610.1;Parent=gene-PKHYL_RS03405;Dbxref=Genbank:WP_058025610.1;Name=WP_058025610.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280944.1;locus_tag=PKHYL_RS03405;product=elongation factor P;protein_id=WP_058025610.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	665353	666360	.	+	.	ID=gene-PKHYL_RS03410;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=PKHYL_RS03410;old_locus_tag=PKHYL_08130
NZ_AP019516.1	Protein Homology	CDS	665353	666360	.	+	0	ID=cds-WP_071002193.1;Parent=gene-PKHYL_RS03410;Dbxref=Genbank:WP_071002193.1;Name=WP_071002193.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201330.1;locus_tag=PKHYL_RS03410;product=EF-P beta-lysylation protein EpmB;protein_id=WP_071002193.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	666653	668392	.	+	.	ID=gene-PKHYL_RS03415;Name=PKHYL_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03415;old_locus_tag=PKHYL_08140
NZ_AP019516.1	Protein Homology	CDS	666653	668392	.	+	0	ID=cds-WP_240365980.1;Parent=gene-PKHYL_RS03415;Dbxref=Genbank:WP_240365980.1;Name=WP_240365980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201329.1;locus_tag=PKHYL_RS03415;product=hypothetical protein;protein_id=WP_240365980.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	668869	670101	.	+	.	ID=gene-PKHYL_RS03420;Name=PKHYL_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03420;old_locus_tag=PKHYL_08150
NZ_AP019516.1	Protein Homology	CDS	668869	670101	.	+	0	ID=cds-WP_240365981.1;Parent=gene-PKHYL_RS03420;Dbxref=Genbank:WP_240365981.1;Name=WP_240365981.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=PKHYL_RS03420;product=diguanylate cyclase;protein_id=WP_240365981.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	670116	670367	.	+	.	ID=gene-PKHYL_RS03425;Name=PKHYL_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03425;old_locus_tag=PKHYL_08160
NZ_AP019516.1	GeneMarkS-2+	CDS	670116	670367	.	+	0	ID=cds-WP_240365982.1;Parent=gene-PKHYL_RS03425;Dbxref=Genbank:WP_240365982.1;Name=WP_240365982.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03425;product=EAL domain-containing protein;protein_id=WP_240365982.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	670375	670956	.	+	.	ID=gene-PKHYL_RS03430;Name=PKHYL_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03430;old_locus_tag=PKHYL_08170
NZ_AP019516.1	Protein Homology	CDS	670375	670956	.	+	0	ID=cds-WP_240365983.1;Parent=gene-PKHYL_RS03430;Dbxref=Genbank:WP_240365983.1;Name=WP_240365983.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.2;locus_tag=PKHYL_RS03430;product=EAL domain-containing protein;protein_id=WP_240365983.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	671015	671398	.	+	.	ID=gene-PKHYL_RS03435;Name=PKHYL_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03435
NZ_AP019516.1	Protein Homology	CDS	671015	671398	.	+	0	ID=cds-WP_240365984.1;Parent=gene-PKHYL_RS03435;Dbxref=Genbank:WP_240365984.1;Name=WP_240365984.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: protein motif:HMM:NF012264.2;locus_tag=PKHYL_RS03435;product=c-type cytochrome;protein_id=WP_240365984.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	671530	672552	.	+	.	ID=gene-PKHYL_RS03440;Name=PKHYL_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03440;old_locus_tag=PKHYL_08180
NZ_AP019516.1	Protein Homology	CDS	671530	672552	.	+	0	ID=cds-WP_240365985.1;Parent=gene-PKHYL_RS03440;Dbxref=Genbank:WP_240365985.1;Name=WP_240365985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444118.1;locus_tag=PKHYL_RS03440;product=MoxR family ATPase;protein_id=WP_240365985.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	672737	673093	.	+	.	ID=gene-PKHYL_RS03445;Name=PKHYL_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03445;old_locus_tag=PKHYL_08190
NZ_AP019516.1	GeneMarkS-2+	CDS	672737	673093	.	+	0	ID=cds-WP_240365986.1;Parent=gene-PKHYL_RS03445;Dbxref=Genbank:WP_240365986.1;Name=WP_240365986.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03445;product=hypothetical protein;protein_id=WP_240365986.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	673348	673698	.	+	.	ID=gene-PKHYL_RS03450;Name=PKHYL_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03450;old_locus_tag=PKHYL_08200
NZ_AP019516.1	GeneMarkS-2+	CDS	673348	673698	.	+	0	ID=cds-WP_240365987.1;Parent=gene-PKHYL_RS03450;Dbxref=Genbank:WP_240365987.1;Name=WP_240365987.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03450;product=hypothetical protein;protein_id=WP_240365987.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	673695	675089	.	+	.	ID=gene-PKHYL_RS03455;Name=PKHYL_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03455;old_locus_tag=PKHYL_08210
NZ_AP019516.1	Protein Homology	CDS	673695	675089	.	+	0	ID=cds-WP_240365988.1;Parent=gene-PKHYL_RS03455;Dbxref=Genbank:WP_240365988.1;Name=WP_240365988.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023418.2;locus_tag=PKHYL_RS03455;product=DUF3488 domain-containing protein;protein_id=WP_240365988.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	675052	676002	.	+	.	ID=gene-PKHYL_RS03460;Name=PKHYL_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03460;old_locus_tag=PKHYL_08220
NZ_AP019516.1	Protein Homology	CDS	675052	676002	.	+	0	ID=cds-WP_240365989.1;Parent=gene-PKHYL_RS03460;Dbxref=Genbank:WP_240365989.1;Name=WP_240365989.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013961.2;locus_tag=PKHYL_RS03460;product=transglutaminase-like domain-containing protein;protein_id=WP_240365989.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	676038	676325	.	+	.	ID=gene-PKHYL_RS03465;Name=PKHYL_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03465;old_locus_tag=PKHYL_08230
NZ_AP019516.1	Protein Homology	CDS	676038	676325	.	+	0	ID=cds-WP_071002186.1;Parent=gene-PKHYL_RS03465;Dbxref=Genbank:WP_071002186.1;Name=WP_071002186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201315.1;locus_tag=PKHYL_RS03465;product=DUF4031 domain-containing protein;protein_id=WP_071002186.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	676417	676614	.	-	.	ID=gene-PKHYL_RS03470;Name=PKHYL_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03470;old_locus_tag=PKHYL_08240
NZ_AP019516.1	Protein Homology	CDS	676417	676614	.	-	0	ID=cds-WP_227517188.1;Parent=gene-PKHYL_RS03470;Dbxref=Genbank:WP_227517188.1;Name=WP_227517188.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015581.2;locus_tag=PKHYL_RS03470;product=DUF302 domain-containing protein;protein_id=WP_227517188.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	676726	677118	.	-	.	ID=gene-PKHYL_RS03475;Name=PKHYL_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03475
NZ_AP019516.1	Protein Homology	CDS	676726	677118	.	-	0	ID=cds-WP_240366487.1;Parent=gene-PKHYL_RS03475;Dbxref=Genbank:WP_240366487.1;Name=WP_240366487.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=PKHYL_RS03475;product=LysR substrate-binding domain-containing protein;protein_id=WP_240366487.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	677212	677589	.	-	.	ID=gene-PKHYL_RS03480;Name=PKHYL_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03480;old_locus_tag=PKHYL_08250
NZ_AP019516.1	Protein Homology	CDS	677212	677589	.	-	0	ID=cds-WP_240365990.1;Parent=gene-PKHYL_RS03480;Dbxref=Genbank:WP_240365990.1;Name=WP_240365990.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012354.2;locus_tag=PKHYL_RS03480;product=LysR family transcriptional regulator;protein_id=WP_240365990.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	677885	679009	.	+	.	ID=gene-PKHYL_RS03485;Name=PKHYL_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03485;old_locus_tag=PKHYL_08260
NZ_AP019516.1	Protein Homology	CDS	677885	679009	.	+	0	ID=cds-WP_071002184.1;Parent=gene-PKHYL_RS03485;Dbxref=Genbank:WP_071002184.1;Name=WP_071002184.1;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201309.1;locus_tag=PKHYL_RS03485;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_071002184.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	679126	679781	.	-	.	ID=gene-PKHYL_RS03490;Name=PKHYL_RS03490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03490;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	679126	679781	.	-	0	ID=cds-PKHYL_RS03490;Parent=gene-PKHYL_RS03490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201018.1;locus_tag=PKHYL_RS03490;product=DsbA family oxidoreductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	680275	680592	.	+	.	ID=gene-PKHYL_RS03495;Name=PKHYL_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03495;old_locus_tag=PKHYL_08290
NZ_AP019516.1	Protein Homology	CDS	680275	680592	.	+	0	ID=cds-WP_237182800.1;Parent=gene-PKHYL_RS03495;Dbxref=Genbank:WP_237182800.1;Name=WP_237182800.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013077.2;locus_tag=PKHYL_RS03495;product=nitroreductase family protein;protein_id=WP_237182800.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	680593	680793	.	+	.	ID=gene-PKHYL_RS03500;Name=PKHYL_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03500;old_locus_tag=PKHYL_08300
NZ_AP019516.1	GeneMarkS-2+	CDS	680593	680793	.	+	0	ID=cds-WP_240365991.1;Parent=gene-PKHYL_RS03500;Dbxref=Genbank:WP_240365991.1;Name=WP_240365991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03500;product=hypothetical protein;protein_id=WP_240365991.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	681464	681970	.	+	.	ID=gene-PKHYL_RS03505;Name=PKHYL_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03505;old_locus_tag=PKHYL_08310
NZ_AP019516.1	Protein Homology	CDS	681464	681970	.	+	0	ID=cds-WP_240365992.1;Parent=gene-PKHYL_RS03505;Dbxref=Genbank:WP_240365992.1;Name=WP_240365992.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013923.2;locus_tag=PKHYL_RS03505;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_240365992.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	681967	682959	.	+	.	ID=gene-PKHYL_RS03510;Name=PKHYL_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03510;old_locus_tag=PKHYL_08320
NZ_AP019516.1	Protein Homology	CDS	681967	682959	.	+	0	ID=cds-WP_240365993.1;Parent=gene-PKHYL_RS03510;Dbxref=Genbank:WP_240365993.1;Name=WP_240365993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514128.1;locus_tag=PKHYL_RS03510;product=xanthine dehydrogenase family protein subunit M;protein_id=WP_240365993.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	683260	683394	.	+	.	ID=gene-PKHYL_RS17095;Name=PKHYL_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17095;old_locus_tag=PKHYL_08330
NZ_AP019516.1	GeneMarkS-2+	CDS	683260	683394	.	+	0	ID=cds-WP_269778234.1;Parent=gene-PKHYL_RS17095;Dbxref=Genbank:WP_269778234.1;Name=WP_269778234.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17095;product=hypothetical protein;protein_id=WP_269778234.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	683537	684901	.	+	.	ID=gene-PKHYL_RS03515;Name=PKHYL_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03515;old_locus_tag=PKHYL_08340
NZ_AP019516.1	Protein Homology	CDS	683537	684901	.	+	0	ID=cds-WP_269778235.1;Parent=gene-PKHYL_RS03515;Dbxref=Genbank:WP_269778235.1;Name=WP_269778235.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF014758.2;locus_tag=PKHYL_RS03515;product=molybdopterin-dependent oxidoreductase;protein_id=WP_269778235.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	684853	685377	.	+	.	ID=gene-PKHYL_RS17100;Name=PKHYL_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17100;old_locus_tag=PKHYL_08350
NZ_AP019516.1	Protein Homology	CDS	684853	685377	.	+	0	ID=cds-WP_269778236.1;Parent=gene-PKHYL_RS17100;Dbxref=Genbank:WP_269778236.1;Name=WP_269778236.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF014758.2;locus_tag=PKHYL_RS17100;product=molybdopterin-dependent oxidoreductase;protein_id=WP_269778236.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	685502	686794	.	+	.	ID=gene-PKHYL_RS03520;Name=PKHYL_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03520;old_locus_tag=PKHYL_08360
NZ_AP019516.1	Protein Homology	CDS	685502	686794	.	+	0	ID=cds-WP_071002179.1;Parent=gene-PKHYL_RS03520;Dbxref=Genbank:WP_071002179.1;Name=WP_071002179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201024.1;locus_tag=PKHYL_RS03520;product=XdhC/CoxI family protein;protein_id=WP_071002179.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	686791	687501	.	+	.	ID=gene-PKHYL_RS03525;Name=PKHYL_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03525;old_locus_tag=PKHYL_08370
NZ_AP019516.1	Protein Homology	CDS	686791	687501	.	+	0	ID=cds-WP_071002178.1;Parent=gene-PKHYL_RS03525;Dbxref=Genbank:WP_071002178.1;Name=WP_071002178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201025.1;locus_tag=PKHYL_RS03525;product=nucleotidyltransferase family protein;protein_id=WP_071002178.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	687527	688086	.	+	.	ID=gene-PKHYL_RS03530;Name=PKHYL_RS03530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03530;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	687527	688086	.	+	0	ID=cds-PKHYL_RS03530;Parent=gene-PKHYL_RS03530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444109.1;locus_tag=PKHYL_RS03530;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	688140	688616	.	-	.	ID=gene-PKHYL_RS03535;Name=PKHYL_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03535;old_locus_tag=PKHYL_08400
NZ_AP019516.1	Protein Homology	CDS	688140	688616	.	-	0	ID=cds-WP_240366488.1;Parent=gene-PKHYL_RS03535;Dbxref=Genbank:WP_240366488.1;Name=WP_240366488.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021788.2;locus_tag=PKHYL_RS03535;product=protein N-lysine methyltransferase family protein;protein_id=WP_240366488.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	688573	688770	.	-	.	ID=gene-PKHYL_RS03540;Name=PKHYL_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03540;old_locus_tag=PKHYL_08410
NZ_AP019516.1	GeneMarkS-2+	CDS	688573	688770	.	-	0	ID=cds-WP_240365994.1;Parent=gene-PKHYL_RS03540;Dbxref=Genbank:WP_240365994.1;Name=WP_240365994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03540;product=hypothetical protein;protein_id=WP_240365994.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	689143	689757	.	-	.	ID=gene-PKHYL_RS03545;Name=PKHYL_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03545;old_locus_tag=PKHYL_08420
NZ_AP019516.1	Protein Homology	CDS	689143	689757	.	-	0	ID=cds-WP_186473855.1;Parent=gene-PKHYL_RS03545;Dbxref=Genbank:WP_186473855.1;Name=WP_186473855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201030.1;locus_tag=PKHYL_RS03545;product=hypothetical protein;protein_id=WP_186473855.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	689825	690454	.	-	.	ID=gene-PKHYL_RS03550;Name=PKHYL_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03550;old_locus_tag=PKHYL_08430
NZ_AP019516.1	GeneMarkS-2+	CDS	689825	690454	.	-	0	ID=cds-WP_212564260.1;Parent=gene-PKHYL_RS03550;Dbxref=Genbank:WP_212564260.1;Name=WP_212564260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03550;product=hypothetical protein;protein_id=WP_212564260.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	690555	691304	.	-	.	ID=gene-PKHYL_RS03555;Name=PKHYL_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03555;old_locus_tag=PKHYL_08440
NZ_AP019516.1	Protein Homology	CDS	690555	691304	.	-	0	ID=cds-WP_212564261.1;Parent=gene-PKHYL_RS03555;Dbxref=Genbank:WP_212564261.1;Name=WP_212564261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201033.1;locus_tag=PKHYL_RS03555;product=PhnD/SsuA/transferrin family substrate-binding protein;protein_id=WP_212564261.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	691308	691802	.	-	.	ID=gene-PKHYL_RS03560;Name=PKHYL_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03560;old_locus_tag=PKHYL_08450
NZ_AP019516.1	Protein Homology	CDS	691308	691802	.	-	0	ID=cds-WP_071002173.1;Parent=gene-PKHYL_RS03560;Dbxref=Genbank:WP_071002173.1;Name=WP_071002173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201035.1;locus_tag=PKHYL_RS03560;product=PAS domain-containing protein;protein_id=WP_071002173.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	691885	692247	.	-	.	ID=gene-PKHYL_RS03565;Name=PKHYL_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03565;old_locus_tag=PKHYL_08460
NZ_AP019516.1	Protein Homology	CDS	691885	692247	.	-	0	ID=cds-WP_071002172.1;Parent=gene-PKHYL_RS03565;Dbxref=Genbank:WP_071002172.1;Name=WP_071002172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520838.1;locus_tag=PKHYL_RS03565;product=roadblock/LC7 domain-containing protein;protein_id=WP_071002172.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	692491	693815	.	-	.	ID=gene-PKHYL_RS03570;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=pseudogene;locus_tag=PKHYL_RS03570;old_locus_tag=PKHYL_08480;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	692491	693815	.	-	0	ID=cds-PKHYL_RS03570;Parent=gene-PKHYL_RS03570;Note=frameshifted;Ontology_term=GO:0006548,GO:0050480;gbkey=CDS;gene=hutI;go_function=imidazolonepropionase activity|0050480||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201042.1;locus_tag=PKHYL_RS03570;product=imidazolonepropionase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	693879	694910	.	-	.	ID=gene-PKHYL_RS03575;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=PKHYL_RS03575;old_locus_tag=PKHYL_08490
NZ_AP019516.1	Protein Homology	CDS	693879	694910	.	-	0	ID=cds-WP_071003668.1;Parent=gene-PKHYL_RS03575;Dbxref=Genbank:WP_071003668.1;Name=WP_071003668.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201044.1;locus_tag=PKHYL_RS03575;product=formimidoylglutamase;protein_id=WP_071003668.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	694953	696515	.	-	.	ID=gene-PKHYL_RS03580;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=PKHYL_RS03580;old_locus_tag=PKHYL_08500
NZ_AP019516.1	Protein Homology	CDS	694953	696515	.	-	0	ID=cds-WP_071002171.1;Parent=gene-PKHYL_RS03580;Dbxref=Genbank:WP_071002171.1;Name=WP_071002171.1;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514252.1;locus_tag=PKHYL_RS03580;product=histidine ammonia-lyase;protein_id=WP_071002171.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	696579	698235	.	-	.	ID=gene-PKHYL_RS03585;Name=PKHYL_RS03585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03585;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	696579	698235	.	-	0	ID=cds-PKHYL_RS03585;Parent=gene-PKHYL_RS03585;Note=frameshifted;Ontology_term=GO:0016153;gbkey=CDS;go_function=urocanate hydratase activity|0016153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960125.1;locus_tag=PKHYL_RS03585;product=urocanate hydratase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	698585	699337	.	+	.	ID=gene-PKHYL_RS03590;Name=PKHYL_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03590;old_locus_tag=PKHYL_08530
NZ_AP019516.1	Protein Homology	CDS	698585	699337	.	+	0	ID=cds-WP_240365995.1;Parent=gene-PKHYL_RS03590;Dbxref=Genbank:WP_240365995.1;Name=WP_240365995.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393843.1;locus_tag=PKHYL_RS03590;product=UTRA domain-containing protein;protein_id=WP_240365995.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	699687	700523	.	+	.	ID=gene-PKHYL_RS03595;Name=PKHYL_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03595;old_locus_tag=PKHYL_08540
NZ_AP019516.1	Protein Homology	CDS	699687	700523	.	+	0	ID=cds-WP_071002168.1;Parent=gene-PKHYL_RS03595;Dbxref=Genbank:WP_071002168.1;Name=WP_071002168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444100.1;locus_tag=PKHYL_RS03595;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_071002168.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	700623	701261	.	+	.	ID=gene-PKHYL_RS03600;Name=PKHYL_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03600;old_locus_tag=PKHYL_08550
NZ_AP019516.1	Protein Homology	CDS	700623	701261	.	+	0	ID=cds-WP_227674154.1;Parent=gene-PKHYL_RS03600;Dbxref=Genbank:WP_227674154.1;Name=WP_227674154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010980845.1;locus_tag=PKHYL_RS03600;product=amino acid ABC transporter permease;protein_id=WP_227674154.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	701338	702081	.	+	.	ID=gene-PKHYL_RS03605;Name=PKHYL_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03605;old_locus_tag=PKHYL_08560
NZ_AP019516.1	Protein Homology	CDS	701338	702081	.	+	0	ID=cds-WP_240365996.1;Parent=gene-PKHYL_RS03605;Dbxref=Genbank:WP_240365996.1;Name=WP_240365996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514246.1;locus_tag=PKHYL_RS03605;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_240365996.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	702392	702904	.	+	.	ID=gene-PKHYL_RS03610;Name=PKHYL_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03610;old_locus_tag=PKHYL_08570
NZ_AP019516.1	GeneMarkS-2+	CDS	702392	702904	.	+	0	ID=cds-WP_152978606.1;Parent=gene-PKHYL_RS03610;Dbxref=Genbank:WP_152978606.1;Name=WP_152978606.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03610;product=hypothetical protein;protein_id=WP_152978606.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	703037	703399	.	-	.	ID=gene-PKHYL_RS03615;Name=PKHYL_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03615;old_locus_tag=PKHYL_08580
NZ_AP019516.1	Protein Homology	CDS	703037	703399	.	-	0	ID=cds-WP_240365997.1;Parent=gene-PKHYL_RS03615;Dbxref=Genbank:WP_240365997.1;Name=WP_240365997.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013088.2;locus_tag=PKHYL_RS03615;product=DMT family transporter;protein_id=WP_240365997.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	703362	703991	.	-	.	ID=gene-PKHYL_RS03620;Name=PKHYL_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03620;old_locus_tag=PKHYL_08590
NZ_AP019516.1	Protein Homology	CDS	703362	703991	.	-	0	ID=cds-WP_240365998.1;Parent=gene-PKHYL_RS03620;Dbxref=Genbank:WP_240365998.1;Name=WP_240365998.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013088.2;locus_tag=PKHYL_RS03620;product=EamA family transporter;protein_id=WP_240365998.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	704319	704967	.	-	.	ID=gene-PKHYL_RS03625;Name=PKHYL_RS03625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03625;old_locus_tag=PKHYL_08600;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	704319	704967	.	-	0	ID=cds-PKHYL_RS03625;Parent=gene-PKHYL_RS03625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444099.1;locus_tag=PKHYL_RS03625;product=aminodeoxychorismate/anthranilate synthase component II;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	705041	706459	.	-	.	ID=gene-PKHYL_RS03630;Name=PKHYL_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03630;old_locus_tag=PKHYL_08620
NZ_AP019516.1	Protein Homology	CDS	705041	706459	.	-	0	ID=cds-WP_179797786.1;Parent=gene-PKHYL_RS03630;Dbxref=Genbank:WP_179797786.1;Name=WP_179797786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201065.1;locus_tag=PKHYL_RS03630;product=anthranilate synthase component I family protein;protein_id=WP_179797786.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	706574	706849	.	-	.	ID=gene-PKHYL_RS03635;Name=PKHYL_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03635;old_locus_tag=PKHYL_08630
NZ_AP019516.1	Protein Homology	CDS	706574	706849	.	-	0	ID=cds-WP_240365999.1;Parent=gene-PKHYL_RS03635;Dbxref=Genbank:WP_240365999.1;Name=WP_240365999.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514242.1;locus_tag=PKHYL_RS03635;product=Trp family transcriptional regulator;protein_id=WP_240365999.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	707413	707598	.	+	.	ID=gene-PKHYL_RS03640;Name=PKHYL_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03640;old_locus_tag=PKHYL_08640
NZ_AP019516.1	GeneMarkS-2+	CDS	707413	707598	.	+	0	ID=cds-WP_240366000.1;Parent=gene-PKHYL_RS03640;Dbxref=Genbank:WP_240366000.1;Name=WP_240366000.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03640;product=hypothetical protein;protein_id=WP_240366000.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	707631	708920	.	+	.	ID=gene-PKHYL_RS03645;Name=PKHYL_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03645;old_locus_tag=PKHYL_08650
NZ_AP019516.1	Protein Homology	CDS	707631	708920	.	+	0	ID=cds-WP_240366489.1;Parent=gene-PKHYL_RS03645;Dbxref=Genbank:WP_240366489.1;Name=WP_240366489.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=PKHYL_RS03645;product=TonB-dependent receptor;protein_id=WP_240366489.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	709019	709402	.	+	.	ID=gene-PKHYL_RS03650;Name=PKHYL_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03650;old_locus_tag=PKHYL_08670
NZ_AP019516.1	Protein Homology	CDS	709019	709402	.	+	0	ID=cds-WP_240366001.1;Parent=gene-PKHYL_RS03650;Dbxref=Genbank:WP_240366001.1;Name=WP_240366001.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=PKHYL_RS03650;product=TonB-dependent receptor;protein_id=WP_240366001.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	709669	710355	.	+	.	ID=gene-PKHYL_RS17105;Name=PKHYL_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17105;old_locus_tag=PKHYL_08680
NZ_AP019516.1	Protein Homology	CDS	709669	710355	.	+	0	ID=cds-WP_269778237.1;Parent=gene-PKHYL_RS17105;Dbxref=Genbank:WP_269778237.1;Name=WP_269778237.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015863.2;locus_tag=PKHYL_RS17105;product=PepSY-associated TM helix domain-containing protein;protein_id=WP_269778237.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	710283	711005	.	+	.	ID=gene-PKHYL_RS17110;Name=PKHYL_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17110;old_locus_tag=PKHYL_08690
NZ_AP019516.1	Protein Homology	CDS	710283	711005	.	+	0	ID=cds-WP_269778310.1;Parent=gene-PKHYL_RS17110;Dbxref=Genbank:WP_269778310.1;Name=WP_269778310.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015863.2;locus_tag=PKHYL_RS17110;product=PepSY-associated TM helix domain-containing protein;protein_id=WP_269778310.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	711097	711483	.	-	.	ID=gene-PKHYL_RS03660;Name=PKHYL_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03660;old_locus_tag=PKHYL_08700
NZ_AP019516.1	Protein Homology	CDS	711097	711483	.	-	0	ID=cds-WP_240366490.1;Parent=gene-PKHYL_RS03660;Dbxref=Genbank:WP_240366490.1;Name=WP_240366490.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=PKHYL_RS03660;product=ATP-binding cassette domain-containing protein;protein_id=WP_240366490.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	711420	711866	.	-	.	ID=gene-PKHYL_RS03665;Name=PKHYL_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03665;old_locus_tag=PKHYL_08710
NZ_AP019516.1	Protein Homology	CDS	711420	711866	.	-	0	ID=cds-WP_240366002.1;Parent=gene-PKHYL_RS03665;Dbxref=Genbank:WP_240366002.1;Name=WP_240366002.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=PKHYL_RS03665;product=ATP-binding cassette domain-containing protein;protein_id=WP_240366002.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	711943	713029	.	-	.	ID=gene-PKHYL_RS03670;Name=PKHYL_RS03670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03670;old_locus_tag=PKHYL_08720;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	711943	713029	.	-	0	ID=cds-PKHYL_RS03670;Parent=gene-PKHYL_RS03670;Note=frameshifted;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196266.1;locus_tag=PKHYL_RS03670;product=iron chelate uptake ABC transporter family permease subunit;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	713144	714238	.	-	.	ID=gene-PKHYL_RS03675;Name=PKHYL_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03675;old_locus_tag=PKHYL_08740
NZ_AP019516.1	Protein Homology	CDS	713144	714238	.	-	0	ID=cds-WP_083328863.1;Parent=gene-PKHYL_RS03675;Dbxref=Genbank:WP_083328863.1;Name=WP_083328863.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444086.1;locus_tag=PKHYL_RS03675;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_083328863.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	714321	714671	.	-	.	ID=gene-PKHYL_RS03680;Name=PKHYL_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03680;old_locus_tag=PKHYL_08760
NZ_AP019516.1	Protein Homology	CDS	714321	714671	.	-	0	ID=cds-WP_240366003.1;Parent=gene-PKHYL_RS03680;Dbxref=Genbank:WP_240366003.1;Name=WP_240366003.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013648.2;locus_tag=PKHYL_RS03680;product=ABC transporter substrate-binding protein;protein_id=WP_240366003.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	714620	715360	.	-	.	ID=gene-PKHYL_RS03685;Name=PKHYL_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03685;old_locus_tag=PKHYL_08770
NZ_AP019516.1	Protein Homology	CDS	714620	715360	.	-	0	ID=cds-WP_240366004.1;Parent=gene-PKHYL_RS03685;Dbxref=Genbank:WP_240366004.1;Name=WP_240366004.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013648.2;locus_tag=PKHYL_RS03685;product=ABC transporter substrate-binding protein;protein_id=WP_240366004.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	715869	716129	.	+	.	ID=gene-PKHYL_RS03690;Name=PKHYL_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03690;old_locus_tag=PKHYL_08780
NZ_AP019516.1	GeneMarkS-2+	CDS	715869	716129	.	+	0	ID=cds-WP_240366005.1;Parent=gene-PKHYL_RS03690;Dbxref=Genbank:WP_240366005.1;Name=WP_240366005.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03690;product=hypothetical protein;protein_id=WP_240366005.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	716386	716655	.	-	.	ID=gene-PKHYL_RS03695;Name=PKHYL_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03695
NZ_AP019516.1	GeneMarkS-2+	CDS	716386	716655	.	-	0	ID=cds-WP_240366006.1;Parent=gene-PKHYL_RS03695;Dbxref=Genbank:WP_240366006.1;Name=WP_240366006.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03695;product=hypothetical protein;protein_id=WP_240366006.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	716657	716839	.	+	.	ID=gene-PKHYL_RS03700;Name=PKHYL_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03700;old_locus_tag=PKHYL_08800
NZ_AP019516.1	Protein Homology	CDS	716657	716839	.	+	0	ID=cds-WP_240366007.1;Parent=gene-PKHYL_RS03700;Dbxref=Genbank:WP_240366007.1;Name=WP_240366007.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:NF015506.2;locus_tag=PKHYL_RS03700;product=TonB family protein;protein_id=WP_240366007.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	716956	717642	.	+	.	ID=gene-PKHYL_RS03705;Name=PKHYL_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03705;old_locus_tag=PKHYL_08810
NZ_AP019516.1	Protein Homology	CDS	716956	717642	.	+	0	ID=cds-WP_240366008.1;Parent=gene-PKHYL_RS03705;Dbxref=Genbank:WP_240366008.1;Name=WP_240366008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960738.1;locus_tag=PKHYL_RS03705;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_240366008.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	717693	718094	.	+	.	ID=gene-PKHYL_RS03710;Name=PKHYL_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03710;old_locus_tag=PKHYL_08820
NZ_AP019516.1	Protein Homology	CDS	717693	718094	.	+	0	ID=cds-WP_240366009.1;Parent=gene-PKHYL_RS03710;Dbxref=Genbank:WP_240366009.1;Name=WP_240366009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003663968.1;locus_tag=PKHYL_RS03710;product=biopolymer transporter ExbD;protein_id=WP_240366009.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	718293	718826	.	-	.	ID=gene-PKHYL_RS03715;Name=PKHYL_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03715;old_locus_tag=PKHYL_08830
NZ_AP019516.1	Protein Homology	CDS	718293	718826	.	-	0	ID=cds-WP_071002154.1;Parent=gene-PKHYL_RS03715;Dbxref=Genbank:WP_071002154.1;Name=WP_071002154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394284.1;locus_tag=PKHYL_RS03715;product=DUF2799 domain-containing protein;protein_id=WP_071002154.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	719228	719830	.	+	.	ID=gene-PKHYL_RS03720;Name=PKHYL_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03720;old_locus_tag=PKHYL_08840
NZ_AP019516.1	Protein Homology	CDS	719228	719830	.	+	0	ID=cds-WP_075106813.1;Parent=gene-PKHYL_RS03720;Dbxref=Genbank:WP_075106813.1;Name=WP_075106813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196277.1;locus_tag=PKHYL_RS03720;product=hypothetical protein;protein_id=WP_075106813.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	720123	722793	.	+	.	ID=gene-PKHYL_RS03725;Name=topA;gbkey=Gene;gene=topA;gene_biotype=pseudogene;locus_tag=PKHYL_RS03725;old_locus_tag=PKHYL_08870;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	720123	722793	.	+	0	ID=cds-PKHYL_RS03725;Parent=gene-PKHYL_RS03725;Note=frameshifted%3B internal stop;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010325857.1;locus_tag=PKHYL_RS03725;product=type I DNA topoisomerase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	722873	723430	.	-	.	ID=gene-PKHYL_RS03730;Name=PKHYL_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03730;old_locus_tag=PKHYL_08880
NZ_AP019516.1	Protein Homology	CDS	722873	723430	.	-	0	ID=cds-WP_212564267.1;Parent=gene-PKHYL_RS03730;Dbxref=Genbank:WP_212564267.1;Name=WP_212564267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196279.1;locus_tag=PKHYL_RS03730;product=superoxide dismutase family protein;protein_id=WP_212564267.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	723626	723985	.	-	.	ID=gene-PKHYL_RS03735;Name=PKHYL_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03735;old_locus_tag=PKHYL_08890
NZ_AP019516.1	Protein Homology	CDS	723626	723985	.	-	0	ID=cds-WP_240366010.1;Parent=gene-PKHYL_RS03735;Dbxref=Genbank:WP_240366010.1;Name=WP_240366010.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015669.2;locus_tag=PKHYL_RS03735;product=META domain-containing protein;protein_id=WP_240366010.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	723978	724445	.	-	.	ID=gene-PKHYL_RS03740;Name=PKHYL_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03740;old_locus_tag=PKHYL_08900
NZ_AP019516.1	GeneMarkS-2+	CDS	723978	724445	.	-	0	ID=cds-WP_240366011.1;Parent=gene-PKHYL_RS03740;Dbxref=Genbank:WP_240366011.1;Name=WP_240366011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03740;product=hypothetical protein;protein_id=WP_240366011.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	724889	727490	.	-	.	ID=gene-PKHYL_RS03745;Name=lon;gbkey=Gene;gene=lon;gene_biotype=pseudogene;locus_tag=PKHYL_RS03745;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	724889	727490	.	-	0	ID=cds-PKHYL_RS03745;Parent=gene-PKHYL_RS03745;Note=frameshifted;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514219.1;locus_tag=PKHYL_RS03745;product=endopeptidase La;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	727915	729276	.	+	.	ID=gene-PKHYL_RS03750;Name=PKHYL_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03750;old_locus_tag=PKHYL_08940
NZ_AP019516.1	Protein Homology	CDS	727915	729276	.	+	0	ID=cds-WP_071002148.1;Parent=gene-PKHYL_RS03750;Dbxref=Genbank:WP_071002148.1;Name=WP_071002148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444077.1;locus_tag=PKHYL_RS03750;product=TRAP transporter large permease subunit;protein_id=WP_071002148.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	729389	729643	.	-	.	ID=gene-PKHYL_RS03755;Name=PKHYL_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03755;old_locus_tag=PKHYL_08950
NZ_AP019516.1	Protein Homology	CDS	729389	729643	.	-	0	ID=cds-WP_240366012.1;Parent=gene-PKHYL_RS03755;Dbxref=Genbank:WP_240366012.1;Name=WP_240366012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196311.1;locus_tag=PKHYL_RS03755;product=hypothetical protein;protein_id=WP_240366012.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	729643	730293	.	-	.	ID=gene-PKHYL_RS03760;Name=PKHYL_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03760;old_locus_tag=PKHYL_08960
NZ_AP019516.1	Protein Homology	CDS	729643	730293	.	-	0	ID=cds-WP_240366013.1;Parent=gene-PKHYL_RS03760;Dbxref=Genbank:WP_240366013.1;Name=WP_240366013.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673292.1;locus_tag=PKHYL_RS03760;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_240366013.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	730517	731920	.	+	.	ID=gene-PKHYL_RS03765;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=PKHYL_RS03765;old_locus_tag=PKHYL_08970
NZ_AP019516.1	Protein Homology	CDS	730517	731920	.	+	0	ID=cds-WP_240366014.1;Parent=gene-PKHYL_RS03765;Dbxref=Genbank:WP_240366014.1;Name=WP_240366014.1;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444074.1;locus_tag=PKHYL_RS03765;product=class II fumarate hydratase;protein_id=WP_240366014.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	732232	733197	.	+	.	ID=gene-PKHYL_RS03770;Name=PKHYL_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03770;old_locus_tag=PKHYL_08980
NZ_AP019516.1	Protein Homology	CDS	732232	733197	.	+	0	ID=cds-WP_240366491.1;Parent=gene-PKHYL_RS03770;Dbxref=Genbank:WP_240366491.1;Name=WP_240366491.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025388.2;locus_tag=PKHYL_RS03770;product=DUF4238 domain-containing protein;protein_id=WP_240366491.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	733343	734158	.	-	.	ID=gene-PKHYL_RS03775;Name=PKHYL_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03775;old_locus_tag=PKHYL_08990
NZ_AP019516.1	Protein Homology	CDS	733343	734158	.	-	0	ID=cds-WP_071002143.1;Parent=gene-PKHYL_RS03775;Dbxref=Genbank:WP_071002143.1;Name=WP_071002143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196329.1;locus_tag=PKHYL_RS03775;product=MipA/OmpV family protein;protein_id=WP_071002143.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	734299	735336	.	-	.	ID=gene-PKHYL_RS03780;Name=PKHYL_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03780;old_locus_tag=PKHYL_09000
NZ_AP019516.1	Protein Homology	CDS	734299	735336	.	-	0	ID=cds-WP_240366015.1;Parent=gene-PKHYL_RS03780;Dbxref=Genbank:WP_240366015.1;Name=WP_240366015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196331.1;locus_tag=PKHYL_RS03780;product=rhomboid family intramembrane serine protease;protein_id=WP_240366015.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	735443	736629	.	-	.	ID=gene-PKHYL_RS03785;Name=PKHYL_RS03785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03785;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	735443	736629	.	-	0	ID=cds-PKHYL_RS03785;Parent=gene-PKHYL_RS03785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669743.1;locus_tag=PKHYL_RS03785;product=alpha-hydroxy acid oxidase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	736668	736979	.	-	.	ID=gene-PKHYL_RS03790;Name=PKHYL_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03790;old_locus_tag=PKHYL_09030
NZ_AP019516.1	Protein Homology	CDS	736668	736979	.	-	0	ID=cds-WP_058024101.1;Parent=gene-PKHYL_RS03790;Dbxref=Genbank:WP_058024101.1;Name=WP_058024101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196332.1;locus_tag=PKHYL_RS03790;product=glutaredoxin family protein;protein_id=WP_058024101.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	737187	737873	.	+	.	ID=gene-PKHYL_RS03795;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=PKHYL_RS03795;old_locus_tag=PKHYL_09040
NZ_AP019516.1	Protein Homology	CDS	737187	737873	.	+	0	ID=cds-WP_071002140.1;Parent=gene-PKHYL_RS03795;Dbxref=Genbank:WP_071002140.1;Name=WP_071002140.1;Ontology_term=GO:0009252,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514203.1;locus_tag=PKHYL_RS03795;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_071002140.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	738231	740375	.	+	.	ID=gene-PKHYL_RS03800;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=pseudogene;locus_tag=PKHYL_RS03800;old_locus_tag=PKHYL_09050;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	738231	740375	.	+	0	ID=cds-PKHYL_RS03800;Parent=gene-PKHYL_RS03800;Note=frameshifted;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395301.1;locus_tag=PKHYL_RS03800;product=polyphosphate kinase 1;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	740736	740906	.	+	.	ID=gene-PKHYL_RS03805;Name=PKHYL_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03805;old_locus_tag=PKHYL_09060
NZ_AP019516.1	Protein Homology	CDS	740736	740906	.	+	0	ID=cds-WP_197496744.1;Parent=gene-PKHYL_RS03805;Dbxref=Genbank:WP_197496744.1;Name=WP_197496744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196338.1;locus_tag=PKHYL_RS03805;product=hypothetical protein;protein_id=WP_197496744.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	740976	741221	.	+	.	ID=gene-PKHYL_RS03810;Name=PKHYL_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03810;old_locus_tag=PKHYL_09070
NZ_AP019516.1	Protein Homology	CDS	740976	741221	.	+	0	ID=cds-WP_071002139.1;Parent=gene-PKHYL_RS03810;Dbxref=Genbank:WP_071002139.1;Name=WP_071002139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196341.1;locus_tag=PKHYL_RS03810;product=hypothetical protein;protein_id=WP_071002139.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	741280	741570	.	+	.	ID=gene-PKHYL_RS03815;Name=PKHYL_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03815;old_locus_tag=PKHYL_09080
NZ_AP019516.1	GeneMarkS-2+	CDS	741280	741570	.	+	0	ID=cds-WP_240366016.1;Parent=gene-PKHYL_RS03815;Dbxref=Genbank:WP_240366016.1;Name=WP_240366016.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03815;product=hypothetical protein;protein_id=WP_240366016.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	741773	741967	.	+	.	ID=gene-PKHYL_RS03820;Name=PKHYL_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03820;old_locus_tag=PKHYL_09090
NZ_AP019516.1	GeneMarkS-2+	CDS	741773	741967	.	+	0	ID=cds-WP_071002137.1;Parent=gene-PKHYL_RS03820;Dbxref=Genbank:WP_071002137.1;Name=WP_071002137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03820;product=hypothetical protein;protein_id=WP_071002137.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	742140	742797	.	-	.	ID=gene-PKHYL_RS03825;Name=PKHYL_RS03825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03825;old_locus_tag=PKHYL_09100;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	742140	742797	.	-	0	ID=cds-PKHYL_RS03825;Parent=gene-PKHYL_RS03825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196346.1;locus_tag=PKHYL_RS03825;product=tRNA-(ms[2]io[6]A)-hydroxylase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	743707	745880	.	+	.	ID=gene-PKHYL_RS03830;Name=PKHYL_RS03830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03830;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	743707	745880	.	+	0	ID=cds-PKHYL_RS03830;Parent=gene-PKHYL_RS03830;Note=frameshifted;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501265.1;locus_tag=PKHYL_RS03830;product=malate synthase G;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	746472	747581	.	+	.	ID=gene-PKHYL_RS03835;Name=PKHYL_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03835;old_locus_tag=PKHYL_09130
NZ_AP019516.1	Protein Homology	CDS	746472	747581	.	+	0	ID=cds-WP_071002135.1;Parent=gene-PKHYL_RS03835;Dbxref=Genbank:WP_071002135.1;Name=WP_071002135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196352.1;locus_tag=PKHYL_RS03835;product=porin;protein_id=WP_071002135.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	747777	748964	.	+	.	ID=gene-PKHYL_RS03840;Name=PKHYL_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03840;old_locus_tag=PKHYL_09140
NZ_AP019516.1	Protein Homology	CDS	747777	748964	.	+	0	ID=cds-WP_240366017.1;Parent=gene-PKHYL_RS03840;Dbxref=Genbank:WP_240366017.1;Name=WP_240366017.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024996.2;locus_tag=PKHYL_RS03840;product=porin;protein_id=WP_240366017.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	749194	750828	.	+	.	ID=gene-PKHYL_RS03845;Name=PKHYL_RS03845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03845;old_locus_tag=PKHYL_09160;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	749194	750828	.	+	0	ID=cds-PKHYL_RS03845;Parent=gene-PKHYL_RS03845;Note=frameshifted;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004995647.1;locus_tag=PKHYL_RS03845;product=CTP synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	751063	751937	.	+	.	ID=gene-PKHYL_RS03850;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=pseudogene;locus_tag=PKHYL_RS03850;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	751063	751937	.	+	0	ID=cds-PKHYL_RS03850;Parent=gene-PKHYL_RS03850;Note=frameshifted;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196356.1;locus_tag=PKHYL_RS03850;product=3-deoxy-8-phosphooctulonate synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	751965	752219	.	+	.	ID=gene-PKHYL_RS03855;Name=PKHYL_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03855;old_locus_tag=PKHYL_09190
NZ_AP019516.1	Protein Homology	CDS	751965	752219	.	+	0	ID=cds-WP_093071246.1;Parent=gene-PKHYL_RS03855;Dbxref=Genbank:WP_093071246.1;Name=WP_093071246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514193.1;locus_tag=PKHYL_RS03855;product=heavy-metal-associated domain-containing protein;protein_id=WP_093071246.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	752452	752676	.	+	.	ID=gene-PKHYL_RS03860;Name=PKHYL_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03860;old_locus_tag=PKHYL_09200
NZ_AP019516.1	Protein Homology	CDS	752452	752676	.	+	0	ID=cds-WP_071002129.1;Parent=gene-PKHYL_RS03860;Dbxref=Genbank:WP_071002129.1;Name=WP_071002129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280902.1;locus_tag=PKHYL_RS03860;product=cation transporter;protein_id=WP_071002129.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	753022	755379	.	+	.	ID=gene-PKHYL_RS03865;Name=PKHYL_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03865;old_locus_tag=PKHYL_09210
NZ_AP019516.1	Protein Homology	CDS	753022	755379	.	+	0	ID=cds-WP_240366018.1;Parent=gene-PKHYL_RS03865;Dbxref=Genbank:WP_240366018.1;Name=WP_240366018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280901.1;locus_tag=PKHYL_RS03865;product=cation-translocating P-type ATPase;protein_id=WP_240366018.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	755705	757022	.	+	.	ID=gene-PKHYL_RS03870;Name=eno;gbkey=Gene;gene=eno;gene_biotype=pseudogene;locus_tag=PKHYL_RS03870;old_locus_tag=PKHYL_09220;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	755705	757022	.	+	0	ID=cds-PKHYL_RS03870;Parent=gene-PKHYL_RS03870;Note=frameshifted;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395288.1;locus_tag=PKHYL_RS03870;product=phosphopyruvate hydratase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	757291	757443	.	+	.	ID=gene-PKHYL_RS03875;Name=PKHYL_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03875;old_locus_tag=PKHYL_09230
NZ_AP019516.1	GeneMarkS-2+	CDS	757291	757443	.	+	0	ID=cds-WP_240366019.1;Parent=gene-PKHYL_RS03875;Dbxref=Genbank:WP_240366019.1;Name=WP_240366019.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03875;product=hypothetical protein;protein_id=WP_240366019.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	757623	758084	.	+	.	ID=gene-PKHYL_RS17115;Name=PKHYL_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17115;old_locus_tag=PKHYL_09240
NZ_AP019516.1	Protein Homology	CDS	757623	758084	.	+	0	ID=cds-WP_269778238.1;Parent=gene-PKHYL_RS17115;Dbxref=Genbank:WP_269778238.1;Name=WP_269778238.1;Ontology_term=GO:0070567;gbkey=CDS;go_function=cytidylyltransferase activity|0070567||IEA;inference=COORDINATES: protein motif:HMM:NF013308.2;locus_tag=PKHYL_RS17115;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_269778238.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	758050	758358	.	+	.	ID=gene-PKHYL_RS17120;Name=PKHYL_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17120;old_locus_tag=PKHYL_09250
NZ_AP019516.1	Protein Homology	CDS	758050	758358	.	+	0	ID=cds-WP_269778239.1;Parent=gene-PKHYL_RS17120;Dbxref=Genbank:WP_269778239.1;Name=WP_269778239.1;Ontology_term=GO:0070567;gbkey=CDS;go_function=cytidylyltransferase activity|0070567||IEA;inference=COORDINATES: protein motif:HMM:NF013308.2;locus_tag=PKHYL_RS17120;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_269778239.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	758708	758959	.	+	.	ID=gene-PKHYL_RS03885;Name=PKHYL_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03885;old_locus_tag=PKHYL_09260
NZ_AP019516.1	Protein Homology	CDS	758708	758959	.	+	0	ID=cds-WP_240366020.1;Parent=gene-PKHYL_RS03885;Dbxref=Genbank:WP_240366020.1;Name=WP_240366020.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016807.2;locus_tag=PKHYL_RS03885;product=BLUF domain-containing protein;protein_id=WP_240366020.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	758973	759317	.	+	.	ID=gene-PKHYL_RS03890;Name=PKHYL_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03890;old_locus_tag=PKHYL_09270
NZ_AP019516.1	GeneMarkS-2+	CDS	758973	759317	.	+	0	ID=cds-WP_240366021.1;Parent=gene-PKHYL_RS03890;Dbxref=Genbank:WP_240366021.1;Name=WP_240366021.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03890;product=hypothetical protein;protein_id=WP_240366021.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	759592	759667	.	-	.	ID=gene-PKHYL_RS03895;Name=PKHYL_RS03895;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS03895;old_locus_tag=PKHYL_t00160
NZ_AP019516.1	tRNAscan-SE	tRNA	759592	759667	.	-	.	ID=rna-PKHYL_RS03895;Parent=gene-PKHYL_RS03895;anticodon=(pos:complement(759631..759633));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS03895;product=tRNA-Glu
NZ_AP019516.1	tRNAscan-SE	exon	759592	759667	.	-	.	ID=exon-PKHYL_RS03895-1;Parent=rna-PKHYL_RS03895;anticodon=(pos:complement(759631..759633));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS03895;product=tRNA-Glu
NZ_AP019516.1	RefSeq	gene	760199	760978	.	-	.	ID=gene-PKHYL_RS03900;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=PKHYL_RS03900;old_locus_tag=PKHYL_09290
NZ_AP019516.1	Protein Homology	CDS	760199	760978	.	-	0	ID=cds-WP_223333204.1;Parent=gene-PKHYL_RS03900;Dbxref=Genbank:WP_223333204.1;Name=WP_223333204.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196367.1;locus_tag=PKHYL_RS03900;product=ribonuclease T;protein_id=WP_223333204.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	761143	762213	.	-	.	ID=gene-PKHYL_RS03905;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=pseudogene;locus_tag=PKHYL_RS03905;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	761143	762213	.	-	0	ID=cds-PKHYL_RS03905;Parent=gene-PKHYL_RS03905;Note=frameshifted;Ontology_term=GO:0009220,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016655519.1;locus_tag=PKHYL_RS03905;product=dihydroorotase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	762508	763722	.	+	.	ID=gene-PKHYL_RS03910;Name=PKHYL_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03910;old_locus_tag=PKHYL_09320
NZ_AP019516.1	Protein Homology	CDS	762508	763722	.	+	0	ID=cds-WP_269778240.1;Parent=gene-PKHYL_RS03910;Dbxref=Genbank:WP_269778240.1;Name=WP_269778240.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: protein motif:HMM:NF001770.0;locus_tag=PKHYL_RS03910;product=argininosuccinate synthase;protein_id=WP_269778240.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	763913	764086	.	+	.	ID=gene-PKHYL_RS17125;Name=PKHYL_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17125;old_locus_tag=PKHYL_09330
NZ_AP019516.1	Protein Homology	CDS	763913	764086	.	+	0	ID=cds-WP_269778241.1;Parent=gene-PKHYL_RS17125;Dbxref=Genbank:WP_269778241.1;Name=WP_269778241.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013842.2;locus_tag=PKHYL_RS17125;product=helix-turn-helix domain-containing protein;protein_id=WP_269778241.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	764145	764219	.	+	.	ID=gene-PKHYL_RS17130;Name=PKHYL_RS17130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17130;partial=true;pseudo=true;start_range=.,764145
NZ_AP019516.1	Protein Homology	CDS	764145	764219	.	+	0	ID=cds-PKHYL_RS17130;Parent=gene-PKHYL_RS17130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013842.2;locus_tag=PKHYL_RS17130;partial=true;product=transposase;pseudo=true;start_range=.,764145;transl_table=11
NZ_AP019516.1	RefSeq	gene	764194	764634	.	+	.	ID=gene-PKHYL_RS03920;Name=PKHYL_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03920;old_locus_tag=PKHYL_09340
NZ_AP019516.1	Protein Homology	CDS	764194	764634	.	+	0	ID=cds-WP_240366022.1;Parent=gene-PKHYL_RS03920;Dbxref=Genbank:WP_240366022.1;Name=WP_240366022.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024751.2;locus_tag=PKHYL_RS03920;product=transposase;protein_id=WP_240366022.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	764808	765653	.	-	.	ID=gene-PKHYL_RS03925;Name=PKHYL_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03925;old_locus_tag=PKHYL_09350
NZ_AP019516.1	GeneMarkS-2+	CDS	764808	765653	.	-	0	ID=cds-WP_240366023.1;Parent=gene-PKHYL_RS03925;Dbxref=Genbank:WP_240366023.1;Name=WP_240366023.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03925;product=hypothetical protein;protein_id=WP_240366023.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	765745	766011	.	-	.	ID=gene-PKHYL_RS03930;Name=PKHYL_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03930;old_locus_tag=PKHYL_09360
NZ_AP019516.1	GeneMarkS-2+	CDS	765745	766011	.	-	0	ID=cds-WP_240366024.1;Parent=gene-PKHYL_RS03930;Dbxref=Genbank:WP_240366024.1;Name=WP_240366024.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03930;product=hypothetical protein;protein_id=WP_240366024.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	766227	766742	.	+	.	ID=gene-PKHYL_RS03935;Name=PKHYL_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03935;old_locus_tag=PKHYL_09370
NZ_AP019516.1	Protein Homology	CDS	766227	766742	.	+	0	ID=cds-WP_223333200.1;Parent=gene-PKHYL_RS03935;Dbxref=Genbank:WP_223333200.1;Name=WP_223333200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196374.1;locus_tag=PKHYL_RS03935;product=L%2CD-transpeptidase;protein_id=WP_223333200.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	766979	768010	.	-	.	ID=gene-PKHYL_RS03940;Name=PKHYL_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03940;old_locus_tag=PKHYL_09380
NZ_AP019516.1	GeneMarkS-2+	CDS	766979	768010	.	-	0	ID=cds-WP_240366025.1;Parent=gene-PKHYL_RS03940;Dbxref=Genbank:WP_240366025.1;Name=WP_240366025.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS03940;product=CHAD domain-containing protein;protein_id=WP_240366025.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	767953	768564	.	-	.	ID=gene-PKHYL_RS03945;Name=PKHYL_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03945;old_locus_tag=PKHYL_09390
NZ_AP019516.1	Protein Homology	CDS	767953	768564	.	-	0	ID=cds-WP_240366026.1;Parent=gene-PKHYL_RS03945;Dbxref=Genbank:WP_240366026.1;Name=WP_240366026.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014038.2;locus_tag=PKHYL_RS03945;product=CYTH domain-containing protein;protein_id=WP_240366026.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	768719	770305	.	-	.	ID=gene-PKHYL_RS03950;Name=PKHYL_RS03950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03950;old_locus_tag=PKHYL_09400;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	768719	770305	.	-	0	ID=cds-PKHYL_RS03950;Parent=gene-PKHYL_RS03950;Note=frameshifted;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196379.1;locus_tag=PKHYL_RS03950;product=isocitrate lyase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	770960	771950	.	+	.	ID=gene-PKHYL_RS03955;Name=PKHYL_RS03955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03955;old_locus_tag=PKHYL_09420;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	770960	771950	.	+	0	ID=cds-PKHYL_RS03955;Parent=gene-PKHYL_RS03955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514179.1;locus_tag=PKHYL_RS03955;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	772317	772670	.	+	.	ID=gene-PKHYL_RS17135;Name=PKHYL_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17135;old_locus_tag=PKHYL_09430
NZ_AP019516.1	Protein Homology	CDS	772317	772670	.	+	0	ID=cds-WP_269778242.1;Parent=gene-PKHYL_RS17135;Dbxref=Genbank:WP_269778242.1;Name=WP_269778242.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012398.2;locus_tag=PKHYL_RS17135;product=aldehyde dehydrogenase family protein;protein_id=WP_269778242.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	772667	773695	.	+	.	ID=gene-PKHYL_RS03960;Name=PKHYL_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03960;old_locus_tag=PKHYL_09440
NZ_AP019516.1	Protein Homology	CDS	772667	773695	.	+	0	ID=cds-WP_269778243.1;Parent=gene-PKHYL_RS03960;Dbxref=Genbank:WP_269778243.1;Name=WP_269778243.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012398.2;locus_tag=PKHYL_RS03960;product=aldehyde dehydrogenase family protein;protein_id=WP_269778243.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	773964	774647	.	-	.	ID=gene-PKHYL_RS03965;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=PKHYL_RS03965;old_locus_tag=PKHYL_09450
NZ_AP019516.1	Protein Homology	CDS	773964	774647	.	-	0	ID=cds-WP_071002116.1;Parent=gene-PKHYL_RS03965;Dbxref=Genbank:WP_071002116.1;Name=WP_071002116.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196386.1;locus_tag=PKHYL_RS03965;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_071002116.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	774647	775696	.	-	.	ID=gene-PKHYL_RS03970;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=PKHYL_RS03970;old_locus_tag=PKHYL_09460
NZ_AP019516.1	Protein Homology	CDS	774647	775696	.	-	0	ID=cds-WP_071002115.1;Parent=gene-PKHYL_RS03970;Dbxref=Genbank:WP_071002115.1;Name=WP_071002115.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444044.1;locus_tag=PKHYL_RS03970;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_071002115.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	776010	777126	.	+	.	ID=gene-PKHYL_RS03975;Name=PKHYL_RS03975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03975;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	776010	777126	.	+	0	ID=cds-PKHYL_RS03975;Parent=gene-PKHYL_RS03975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514175.1;locus_tag=PKHYL_RS03975;product=AI-2E family transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	777443	778246	.	+	.	ID=gene-PKHYL_RS03980;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=PKHYL_RS03980;old_locus_tag=PKHYL_09490
NZ_AP019516.1	Protein Homology	CDS	777443	778246	.	+	0	ID=cds-WP_071002113.1;Parent=gene-PKHYL_RS03980;Dbxref=Genbank:WP_071002113.1;Name=WP_071002113.1;Ontology_term=GO:0032297,GO:0016818;gbkey=CDS;gene=hda;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514174.1;locus_tag=PKHYL_RS03980;product=DnaA regulatory inactivator Hda;protein_id=WP_071002113.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	778350	779051	.	+	.	ID=gene-PKHYL_RS03985;Name=PKHYL_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03985;old_locus_tag=PKHYL_09500
NZ_AP019516.1	Protein Homology	CDS	778350	779051	.	+	0	ID=cds-WP_071002112.1;Parent=gene-PKHYL_RS03985;Dbxref=Genbank:WP_071002112.1;Name=WP_071002112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280885.1;locus_tag=PKHYL_RS03985;product=DUF2057 family protein;protein_id=WP_071002112.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	779171	779527	.	-	.	ID=gene-PKHYL_RS03990;Name=PKHYL_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS03990;old_locus_tag=PKHYL_09510
NZ_AP019516.1	Protein Homology	CDS	779171	779527	.	-	0	ID=cds-WP_240366027.1;Parent=gene-PKHYL_RS03990;Dbxref=Genbank:WP_240366027.1;Name=WP_240366027.1;Ontology_term=GO:0008199;gbkey=CDS;go_function=ferric iron binding|0008199||IEA;inference=COORDINATES: protein motif:HMM:NF012436.2;locus_tag=PKHYL_RS03990;product=ferritin-like domain-containing protein;protein_id=WP_240366027.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	779912	780570	.	-	.	ID=gene-PKHYL_RS03995;Name=PKHYL_RS03995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS03995;old_locus_tag=PKHYL_09540;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	779912	780570	.	-	0	ID=cds-PKHYL_RS03995;Parent=gene-PKHYL_RS03995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196398.1;locus_tag=PKHYL_RS03995;product=YcxB family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	781057	782343	.	+	.	ID=gene-PKHYL_RS04000;Name=serS;gbkey=Gene;gene=serS;gene_biotype=pseudogene;locus_tag=PKHYL_RS04000;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	781057	782343	.	+	0	ID=cds-PKHYL_RS04000;Parent=gene-PKHYL_RS04000;Note=frameshifted;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996444.1;locus_tag=PKHYL_RS04000;product=serine--tRNA ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	782639	784634	.	+	.	ID=gene-PKHYL_RS04005;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=pseudogene;locus_tag=PKHYL_RS04005;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	782639	784634	.	+	0	ID=cds-PKHYL_RS04005;Parent=gene-PKHYL_RS04005;Note=frameshifted;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280881.1;locus_tag=PKHYL_RS04005;product=transketolase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	784715	785107	.	+	.	ID=gene-PKHYL_RS04010;Name=PKHYL_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04010;old_locus_tag=PKHYL_09610
NZ_AP019516.1	GeneMarkS-2+	CDS	784715	785107	.	+	0	ID=cds-WP_240366028.1;Parent=gene-PKHYL_RS04010;Dbxref=Genbank:WP_240366028.1;Name=WP_240366028.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04010;product=hypothetical protein;protein_id=WP_240366028.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	786232	787305	.	+	.	ID=gene-PKHYL_RS04015;Name=PKHYL_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04015;old_locus_tag=PKHYL_09630
NZ_AP019516.1	GeneMarkS-2+	CDS	786232	787305	.	+	0	ID=cds-WP_240366029.1;Parent=gene-PKHYL_RS04015;Dbxref=Genbank:WP_240366029.1;Name=WP_240366029.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04015;product=hypothetical protein;protein_id=WP_240366029.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	787346	788326	.	+	.	ID=gene-PKHYL_RS04020;Name=PKHYL_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04020;old_locus_tag=PKHYL_09640
NZ_AP019516.1	Protein Homology	CDS	787346	788326	.	+	0	ID=cds-WP_240366030.1;Parent=gene-PKHYL_RS04020;Dbxref=Genbank:WP_240366030.1;Name=WP_240366030.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019976.2;locus_tag=PKHYL_RS04020;product=nuclease-related domain-containing protein;protein_id=WP_240366030.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	788353	789324	.	-	.	ID=gene-PKHYL_RS04025;Name=PKHYL_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04025;old_locus_tag=PKHYL_09650
NZ_AP019516.1	Protein Homology	CDS	788353	789324	.	-	0	ID=cds-WP_071002104.1;Parent=gene-PKHYL_RS04025;Dbxref=Genbank:WP_071002104.1;Name=WP_071002104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513103.1;locus_tag=PKHYL_RS04025;product=ABC transporter ATP-binding protein;protein_id=WP_071002104.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	789321	789518	.	-	.	ID=gene-PKHYL_RS04030;Name=PKHYL_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04030
NZ_AP019516.1	Protein Homology	CDS	789321	789518	.	-	0	ID=cds-WP_240366031.1;Parent=gene-PKHYL_RS04030;Dbxref=Genbank:WP_240366031.1;Name=WP_240366031.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01727.1;locus_tag=PKHYL_RS04030;product=hypothetical protein;protein_id=WP_240366031.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	789524	790393	.	-	.	ID=gene-PKHYL_RS04035;Name=PKHYL_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04035;old_locus_tag=PKHYL_09660
NZ_AP019516.1	Protein Homology	CDS	789524	790393	.	-	0	ID=cds-WP_240366032.1;Parent=gene-PKHYL_RS04035;Dbxref=Genbank:WP_240366032.1;Name=WP_240366032.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=PKHYL_RS04035;product=ABC transporter ATP-binding protein;protein_id=WP_240366032.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	790395	791141	.	-	.	ID=gene-PKHYL_RS04040;Name=PKHYL_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04040;old_locus_tag=PKHYL_09670
NZ_AP019516.1	Protein Homology	CDS	790395	791141	.	-	0	ID=cds-WP_240366033.1;Parent=gene-PKHYL_RS04040;Dbxref=Genbank:WP_240366033.1;Name=WP_240366033.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012738.2;locus_tag=PKHYL_RS04040;product=ABC transporter permease subunit;protein_id=WP_240366033.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	791451	792467	.	-	.	ID=gene-PKHYL_RS04050;Name=PKHYL_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04050;old_locus_tag=PKHYL_09680
NZ_AP019516.1	Protein Homology	CDS	791451	792467	.	-	0	ID=cds-WP_240366034.1;Parent=gene-PKHYL_RS04050;Dbxref=Genbank:WP_240366034.1;Name=WP_240366034.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395139.1;locus_tag=PKHYL_RS04050;product=ABC transporter permease subunit;protein_id=WP_240366034.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	792709	794298	.	-	.	ID=gene-PKHYL_RS04055;Name=PKHYL_RS04055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04055;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	792709	794298	.	-	0	ID=cds-PKHYL_RS04055;Parent=gene-PKHYL_RS04055;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012706.2;locus_tag=PKHYL_RS04055;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	794972	795298	.	-	.	ID=gene-PKHYL_RS04060;Name=PKHYL_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04060;old_locus_tag=PKHYL_09720
NZ_AP019516.1	Protein Homology	CDS	794972	795298	.	-	0	ID=cds-WP_058023776.1;Parent=gene-PKHYL_RS04060;Dbxref=Genbank:WP_058023776.1;Name=WP_058023776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444032.1;locus_tag=PKHYL_RS04060;product=DUF779 domain-containing protein;protein_id=WP_058023776.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	795501	796385	.	-	.	ID=gene-PKHYL_RS04065;Name=PKHYL_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04065;old_locus_tag=PKHYL_09730
NZ_AP019516.1	Protein Homology	CDS	795501	796385	.	-	0	ID=cds-WP_240366035.1;Parent=gene-PKHYL_RS04065;Dbxref=Genbank:WP_240366035.1;Name=WP_240366035.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024989.2;locus_tag=PKHYL_RS04065;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_240366035.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	796363	796530	.	-	.	ID=gene-PKHYL_RS04070;Name=PKHYL_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04070;old_locus_tag=PKHYL_09740
NZ_AP019516.1	Protein Homology	CDS	796363	796530	.	-	0	ID=cds-WP_240366036.1;Parent=gene-PKHYL_RS04070;Dbxref=Genbank:WP_240366036.1;Name=WP_240366036.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019845.2;locus_tag=PKHYL_RS04070;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_240366036.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	796723	798293	.	-	.	ID=gene-PKHYL_RS04075;Name=PKHYL_RS04075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04075;old_locus_tag=PKHYL_09760;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	796723	798293	.	-	0	ID=cds-PKHYL_RS04075;Parent=gene-PKHYL_RS04075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514164.1;locus_tag=PKHYL_RS04075;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	798635	800570	.	+	.	ID=gene-PKHYL_RS04080;Name=PKHYL_RS04080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04080;old_locus_tag=PKHYL_09770;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	798635	800570	.	+	0	ID=cds-PKHYL_RS04080;Parent=gene-PKHYL_RS04080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444030.1;locus_tag=PKHYL_RS04080;product=AAA family ATPase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	800715	801864	.	+	.	ID=gene-PKHYL_RS04085;Name=PKHYL_RS04085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04085;old_locus_tag=PKHYL_09780;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	800715	801864	.	+	0	ID=cds-PKHYL_RS04085;Parent=gene-PKHYL_RS04085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514162.1;locus_tag=PKHYL_RS04085;product=type I glyceraldehyde-3-phosphate dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	801958	802048	.	+	.	ID=gene-PKHYL_RS04090;Name=PKHYL_RS04090;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS04090;old_locus_tag=PKHYL_t00170
NZ_AP019516.1	tRNAscan-SE	tRNA	801958	802048	.	+	.	ID=rna-PKHYL_RS04090;Parent=gene-PKHYL_RS04090;anticodon=(pos:801992..801994);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS04090;product=tRNA-Ser
NZ_AP019516.1	tRNAscan-SE	exon	801958	802048	.	+	.	ID=exon-PKHYL_RS04090-1;Parent=rna-PKHYL_RS04090;anticodon=(pos:801992..801994);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS04090;product=tRNA-Ser
NZ_AP019516.1	RefSeq	gene	802269	802799	.	-	.	ID=gene-PKHYL_RS04095;Name=PKHYL_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04095;old_locus_tag=PKHYL_09800
NZ_AP019516.1	Protein Homology	CDS	802269	802799	.	-	0	ID=cds-WP_240366037.1;Parent=gene-PKHYL_RS04095;Dbxref=Genbank:WP_240366037.1;Name=WP_240366037.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005259497.1;locus_tag=PKHYL_RS04095;product=formyltransferase family protein;protein_id=WP_240366037.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	802792	803883	.	-	.	ID=gene-PKHYL_RS04100;Name=PKHYL_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04100;old_locus_tag=PKHYL_09810
NZ_AP019516.1	Protein Homology	CDS	802792	803883	.	-	0	ID=cds-WP_240366038.1;Parent=gene-PKHYL_RS04100;Dbxref=Genbank:WP_240366038.1;Name=WP_240366038.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671038.1;locus_tag=PKHYL_RS04100;product=GNAT family N-acetyltransferase;protein_id=WP_240366038.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	803880	804053	.	-	.	ID=gene-PKHYL_RS04105;Name=PKHYL_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04105;old_locus_tag=PKHYL_09820
NZ_AP019516.1	Protein Homology	CDS	803880	804053	.	-	0	ID=cds-WP_240366039.1;Parent=gene-PKHYL_RS04105;Dbxref=Genbank:WP_240366039.1;Name=WP_240366039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671039.1;locus_tag=PKHYL_RS04105;product=hypothetical protein;protein_id=WP_240366039.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	804384	804665	.	-	.	ID=gene-PKHYL_RS04110;Name=PKHYL_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04110;old_locus_tag=PKHYL_09830
NZ_AP019516.1	GeneMarkS-2+	CDS	804384	804665	.	-	0	ID=cds-WP_240366040.1;Parent=gene-PKHYL_RS04110;Dbxref=Genbank:WP_240366040.1;Name=WP_240366040.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04110;product=hypothetical protein;protein_id=WP_240366040.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	804730	805095	.	-	.	ID=gene-PKHYL_RS04115;Name=PKHYL_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04115;old_locus_tag=PKHYL_09840
NZ_AP019516.1	GeneMarkS-2+	CDS	804730	805095	.	-	0	ID=cds-WP_240366041.1;Parent=gene-PKHYL_RS04115;Dbxref=Genbank:WP_240366041.1;Name=WP_240366041.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04115;product=hypothetical protein;protein_id=WP_240366041.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	805105	805629	.	-	.	ID=gene-PKHYL_RS04120;Name=PKHYL_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04120;old_locus_tag=PKHYL_09850
NZ_AP019516.1	GeneMarkS-2+	CDS	805105	805629	.	-	0	ID=cds-WP_240366042.1;Parent=gene-PKHYL_RS04120;Dbxref=Genbank:WP_240366042.1;Name=WP_240366042.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04120;product=hypothetical protein;protein_id=WP_240366042.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	805626	806672	.	-	.	ID=gene-PKHYL_RS04125;Name=PKHYL_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04125;old_locus_tag=PKHYL_09860
NZ_AP019516.1	Protein Homology	CDS	805626	806672	.	-	0	ID=cds-WP_240366043.1;Parent=gene-PKHYL_RS04125;Dbxref=Genbank:WP_240366043.1;Name=WP_240366043.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016736.2;locus_tag=PKHYL_RS04125;product=baseplate J/gp47 family protein;protein_id=WP_240366043.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	806672	807043	.	-	.	ID=gene-PKHYL_RS04130;Name=PKHYL_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04130;old_locus_tag=PKHYL_09870
NZ_AP019516.1	Protein Homology	CDS	806672	807043	.	-	0	ID=cds-WP_240366044.1;Parent=gene-PKHYL_RS04130;Dbxref=Genbank:WP_240366044.1;Name=WP_240366044.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019055.2;locus_tag=PKHYL_RS04130;product=phage GP46 family protein;protein_id=WP_240366044.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	807033	807344	.	-	.	ID=gene-PKHYL_RS04135;Name=PKHYL_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04135;old_locus_tag=PKHYL_09880
NZ_AP019516.1	GeneMarkS-2+	CDS	807033	807344	.	-	0	ID=cds-WP_240366045.1;Parent=gene-PKHYL_RS04135;Dbxref=Genbank:WP_240366045.1;Name=WP_240366045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04135;product=hypothetical protein;protein_id=WP_240366045.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	807377	807511	.	-	.	ID=gene-PKHYL_RS17140;Name=PKHYL_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17140
NZ_AP019516.1	GeneMarkS-2+	CDS	807377	807511	.	-	0	ID=cds-WP_269778244.1;Parent=gene-PKHYL_RS17140;Dbxref=Genbank:WP_269778244.1;Name=WP_269778244.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17140;product=hypothetical protein;protein_id=WP_269778244.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	807508	808557	.	-	.	ID=gene-PKHYL_RS04140;Name=PKHYL_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04140;old_locus_tag=PKHYL_09890
NZ_AP019516.1	GeneMarkS-2+	CDS	807508	808557	.	-	0	ID=cds-WP_240366046.1;Parent=gene-PKHYL_RS04140;Dbxref=Genbank:WP_240366046.1;Name=WP_240366046.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04140;product=hypothetical protein;protein_id=WP_240366046.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	808570	809781	.	-	.	ID=gene-PKHYL_RS04145;Name=PKHYL_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04145;old_locus_tag=PKHYL_09900
NZ_AP019516.1	Protein Homology	CDS	808570	809781	.	-	0	ID=cds-WP_240366047.1;Parent=gene-PKHYL_RS04145;Dbxref=Genbank:WP_240366047.1;Name=WP_240366047.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018818.2;locus_tag=PKHYL_RS04145;product=DNA circularization N-terminal domain-containing protein;protein_id=WP_240366047.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	809938	810273	.	+	.	ID=gene-PKHYL_RS04150;Name=PKHYL_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04150;old_locus_tag=PKHYL_09910
NZ_AP019516.1	GeneMarkS-2+	CDS	809938	810273	.	+	0	ID=cds-WP_240366048.1;Parent=gene-PKHYL_RS04150;Dbxref=Genbank:WP_240366048.1;Name=WP_240366048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04150;product=hypothetical protein;protein_id=WP_240366048.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	810301	810906	.	+	.	ID=gene-PKHYL_RS04155;Name=PKHYL_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04155;old_locus_tag=PKHYL_09920
NZ_AP019516.1	GeneMarkS-2+	CDS	810301	810906	.	+	0	ID=cds-WP_240366049.1;Parent=gene-PKHYL_RS04155;Dbxref=Genbank:WP_240366049.1;Name=WP_240366049.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04155;product=hypothetical protein;protein_id=WP_240366049.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	810903	811772	.	-	.	ID=gene-PKHYL_RS04160;Name=PKHYL_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04160;old_locus_tag=PKHYL_09930
NZ_AP019516.1	GeneMarkS-2+	CDS	810903	811772	.	-	0	ID=cds-WP_240366050.1;Parent=gene-PKHYL_RS04160;Dbxref=Genbank:WP_240366050.1;Name=WP_240366050.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04160;product=hypothetical protein;protein_id=WP_240366050.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	811769	811897	.	-	.	ID=gene-PKHYL_RS17145;Name=PKHYL_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17145
NZ_AP019516.1	GeneMarkS-2+	CDS	811769	811897	.	-	0	ID=cds-WP_269778245.1;Parent=gene-PKHYL_RS17145;Dbxref=Genbank:WP_269778245.1;Name=WP_269778245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17145;product=hypothetical protein;protein_id=WP_269778245.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	811884	812942	.	-	.	ID=gene-PKHYL_RS04165;Name=PKHYL_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04165;old_locus_tag=PKHYL_09950
NZ_AP019516.1	Protein Homology	CDS	811884	812942	.	-	0	ID=cds-WP_240366051.1;Parent=gene-PKHYL_RS04165;Dbxref=Genbank:WP_240366051.1;Name=WP_240366051.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021648.2;locus_tag=PKHYL_RS04165;product=phage tail tape measure protein;protein_id=WP_240366051.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	812952	813155	.	-	.	ID=gene-PKHYL_RS04170;Name=PKHYL_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04170;old_locus_tag=PKHYL_09960
NZ_AP019516.1	GeneMarkS-2+	CDS	812952	813155	.	-	0	ID=cds-WP_071002087.1;Parent=gene-PKHYL_RS04170;Dbxref=Genbank:WP_071002087.1;Name=WP_071002087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04170;product=hypothetical protein;protein_id=WP_071002087.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	813173	813502	.	-	.	ID=gene-PKHYL_RS04175;Name=PKHYL_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04175;old_locus_tag=PKHYL_09970
NZ_AP019516.1	GeneMarkS-2+	CDS	813173	813502	.	-	0	ID=cds-WP_071002086.1;Parent=gene-PKHYL_RS04175;Dbxref=Genbank:WP_071002086.1;Name=WP_071002086.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04175;product=hypothetical protein;protein_id=WP_071002086.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	813540	813920	.	-	.	ID=gene-PKHYL_RS04180;Name=PKHYL_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04180;old_locus_tag=PKHYL_09980
NZ_AP019516.1	Protein Homology	CDS	813540	813920	.	-	0	ID=cds-WP_071002085.1;Parent=gene-PKHYL_RS04180;Dbxref=Genbank:WP_071002085.1;Name=WP_071002085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004997514.1;locus_tag=PKHYL_RS04180;product=hypothetical protein;protein_id=WP_071002085.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	814059	814860	.	-	.	ID=gene-PKHYL_RS04185;Name=PKHYL_RS04185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04185;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	814059	814860	.	-	0	ID=cds-PKHYL_RS04185;Parent=gene-PKHYL_RS04185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004759759.1;locus_tag=PKHYL_RS04185;product=phage tail protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	814873	815457	.	-	.	ID=gene-PKHYL_RS04190;Name=PKHYL_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04190;old_locus_tag=PKHYL_10010
NZ_AP019516.1	GeneMarkS-2+	CDS	814873	815457	.	-	0	ID=cds-WP_240366052.1;Parent=gene-PKHYL_RS04190;Dbxref=Genbank:WP_240366052.1;Name=WP_240366052.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04190;product=hypothetical protein;protein_id=WP_240366052.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	815432	816415	.	-	.	ID=gene-PKHYL_RS04195;Name=PKHYL_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04195;old_locus_tag=PKHYL_10020
NZ_AP019516.1	GeneMarkS-2+	CDS	815432	816415	.	-	0	ID=cds-WP_240366053.1;Parent=gene-PKHYL_RS04195;Dbxref=Genbank:WP_240366053.1;Name=WP_240366053.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04195;product=hypothetical protein;protein_id=WP_240366053.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	816851	817090	.	-	.	ID=gene-PKHYL_RS04200;Name=PKHYL_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04200;old_locus_tag=PKHYL_10050
NZ_AP019516.1	Protein Homology	CDS	816851	817090	.	-	0	ID=cds-WP_240366054.1;Parent=gene-PKHYL_RS04200;Dbxref=Genbank:WP_240366054.1;Name=WP_240366054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004759761.1;locus_tag=PKHYL_RS04200;product=hypothetical protein;protein_id=WP_240366054.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	817100	817711	.	-	.	ID=gene-PKHYL_RS04205;Name=PKHYL_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04205;old_locus_tag=PKHYL_10060
NZ_AP019516.1	Protein Homology	CDS	817100	817711	.	-	0	ID=cds-WP_240366492.1;Parent=gene-PKHYL_RS04205;Dbxref=Genbank:WP_240366492.1;Name=WP_240366492.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020447.2;locus_tag=PKHYL_RS04205;product=DUF1834 family protein;protein_id=WP_240366492.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	817745	818176	.	-	.	ID=gene-PKHYL_RS04210;Name=PKHYL_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04210;old_locus_tag=PKHYL_10070
NZ_AP019516.1	Protein Homology	CDS	817745	818176	.	-	0	ID=cds-WP_240366055.1;Parent=gene-PKHYL_RS04210;Dbxref=Genbank:WP_240366055.1;Name=WP_240366055.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018704.2;locus_tag=PKHYL_RS04210;product=DUF1320 domain-containing protein;protein_id=WP_240366055.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	818256	819164	.	-	.	ID=gene-PKHYL_RS04215;Name=PKHYL_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04215;old_locus_tag=PKHYL_10080
NZ_AP019516.1	Protein Homology	CDS	818256	819164	.	-	0	ID=cds-WP_071002079.1;Parent=gene-PKHYL_RS04215;Dbxref=Genbank:WP_071002079.1;Name=WP_071002079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001102133.1;locus_tag=PKHYL_RS04215;product=Mu-like prophage major head subunit gpT family protein;protein_id=WP_071002079.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	819217	819639	.	-	.	ID=gene-PKHYL_RS04220;Name=PKHYL_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04220;old_locus_tag=PKHYL_10090
NZ_AP019516.1	GeneMarkS-2+	CDS	819217	819639	.	-	0	ID=cds-WP_240366056.1;Parent=gene-PKHYL_RS04220;Dbxref=Genbank:WP_240366056.1;Name=WP_240366056.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04220;product=hypothetical protein;protein_id=WP_240366056.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	819685	820245	.	-	.	ID=gene-PKHYL_RS04225;Name=PKHYL_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04225;old_locus_tag=PKHYL_10100
NZ_AP019516.1	Protein Homology	CDS	819685	820245	.	-	0	ID=cds-WP_240366057.1;Parent=gene-PKHYL_RS04225;Dbxref=Genbank:WP_240366057.1;Name=WP_240366057.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021627.2;locus_tag=PKHYL_RS04225;product=phage protease;protein_id=WP_240366057.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	820345	820629	.	-	.	ID=gene-PKHYL_RS04230;Name=PKHYL_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04230
NZ_AP019516.1	Protein Homology	CDS	820345	820629	.	-	0	ID=cds-WP_240366058.1;Parent=gene-PKHYL_RS04230;Dbxref=Genbank:WP_240366058.1;Name=WP_240366058.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021627.2;locus_tag=PKHYL_RS04230;product=phage protease;protein_id=WP_240366058.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	820640	820783	.	-	.	ID=gene-PKHYL_RS04235;Name=PKHYL_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04235
NZ_AP019516.1	GeneMarkS-2+	CDS	820640	820783	.	-	0	ID=cds-WP_240366059.1;Parent=gene-PKHYL_RS04235;Dbxref=Genbank:WP_240366059.1;Name=WP_240366059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04235;product=hypothetical protein;protein_id=WP_240366059.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	821097	821579	.	-	.	ID=gene-PKHYL_RS04240;Name=PKHYL_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04240;old_locus_tag=PKHYL_10120
NZ_AP019516.1	Protein Homology	CDS	821097	821579	.	-	0	ID=cds-WP_240366060.1;Parent=gene-PKHYL_RS04240;Dbxref=Genbank:WP_240366060.1;Name=WP_240366060.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004998783.1;locus_tag=PKHYL_RS04240;product=phage virion morphogenesis protein;protein_id=WP_240366060.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	821632	821727	.	+	.	ID=gene-PKHYL_RS04245;Name=PKHYL_RS04245;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS04245
NZ_AP019516.1	tRNAscan-SE	tRNA	821632	821727	.	+	.	ID=rna-PKHYL_RS04245;Parent=gene-PKHYL_RS04245;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS04245;product=tRNA-OTHER
NZ_AP019516.1	tRNAscan-SE	exon	821632	821727	.	+	.	ID=exon-PKHYL_RS04245-1;Parent=rna-PKHYL_RS04245;gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS04245;product=tRNA-OTHER
NZ_AP019516.1	RefSeq	gene	821729	822784	.	-	.	ID=gene-PKHYL_RS04250;Name=PKHYL_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04250;old_locus_tag=PKHYL_10130
NZ_AP019516.1	Protein Homology	CDS	821729	822784	.	-	0	ID=cds-WP_240366061.1;Parent=gene-PKHYL_RS04250;Dbxref=Genbank:WP_240366061.1;Name=WP_240366061.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016148.2;locus_tag=PKHYL_RS04250;product=phage minor head protein;protein_id=WP_240366061.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	822771	822908	.	-	.	ID=gene-PKHYL_RS04255;Name=PKHYL_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04255;old_locus_tag=PKHYL_10140
NZ_AP019516.1	GeneMarkS-2+	CDS	822771	822908	.	-	0	ID=cds-WP_240366062.1;Parent=gene-PKHYL_RS04255;Dbxref=Genbank:WP_240366062.1;Name=WP_240366062.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04255;product=hypothetical protein;protein_id=WP_240366062.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	823082	824362	.	-	.	ID=gene-PKHYL_RS04260;Name=PKHYL_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04260;old_locus_tag=PKHYL_10150
NZ_AP019516.1	Protein Homology	CDS	823082	824362	.	-	0	ID=cds-WP_240366063.1;Parent=gene-PKHYL_RS04260;Dbxref=Genbank:WP_240366063.1;Name=WP_240366063.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017850.2;locus_tag=PKHYL_RS04260;product=DUF935 family protein;protein_id=WP_240366063.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	824359	824721	.	-	.	ID=gene-PKHYL_RS04265;Name=PKHYL_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04265;old_locus_tag=PKHYL_10160
NZ_AP019516.1	Protein Homology	CDS	824359	824721	.	-	0	ID=cds-WP_240366064.1;Parent=gene-PKHYL_RS04265;Dbxref=Genbank:WP_240366064.1;Name=WP_240366064.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017850.2;locus_tag=PKHYL_RS04265;product=DUF935 family protein;protein_id=WP_240366064.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	824756	825226	.	-	.	ID=gene-PKHYL_RS04270;Name=PKHYL_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04270;old_locus_tag=PKHYL_10170
NZ_AP019516.1	Protein Homology	CDS	824756	825226	.	-	0	ID=cds-WP_240366065.1;Parent=gene-PKHYL_RS04270;Dbxref=Genbank:WP_240366065.1;Name=WP_240366065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002004673.1;locus_tag=PKHYL_RS04270;product=hypothetical protein;protein_id=WP_240366065.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	825223	825537	.	-	.	ID=gene-PKHYL_RS04275;Name=PKHYL_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04275;old_locus_tag=PKHYL_10180
NZ_AP019516.1	GeneMarkS-2+	CDS	825223	825537	.	-	0	ID=cds-WP_240366066.1;Parent=gene-PKHYL_RS04275;Dbxref=Genbank:WP_240366066.1;Name=WP_240366066.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04275;product=hypothetical protein;protein_id=WP_240366066.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	825524	826162	.	-	.	ID=gene-PKHYL_RS04280;Name=PKHYL_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04280;old_locus_tag=PKHYL_10190
NZ_AP019516.1	GeneMarkS-2+	CDS	825524	826162	.	-	0	ID=cds-WP_240366067.1;Parent=gene-PKHYL_RS04280;Dbxref=Genbank:WP_240366067.1;Name=WP_240366067.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04280;product=hypothetical protein;protein_id=WP_240366067.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	826107	826334	.	-	.	ID=gene-PKHYL_RS04285;Name=PKHYL_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04285;old_locus_tag=PKHYL_10200
NZ_AP019516.1	GeneMarkS-2+	CDS	826107	826334	.	-	0	ID=cds-WP_240366068.1;Parent=gene-PKHYL_RS04285;Dbxref=Genbank:WP_240366068.1;Name=WP_240366068.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04285;product=hypothetical protein;protein_id=WP_240366068.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	826334	826582	.	-	.	ID=gene-PKHYL_RS17150;Name=PKHYL_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17150;old_locus_tag=PKHYL_10210
NZ_AP019516.1	Protein Homology	CDS	826334	826582	.	-	0	ID=cds-WP_269778246.1;Parent=gene-PKHYL_RS17150;Dbxref=Genbank:WP_269778246.1;Name=WP_269778246.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023411.2;locus_tag=PKHYL_RS17150;product=DUF3486 family protein;protein_id=WP_269778246.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	826605	826877	.	-	.	ID=gene-PKHYL_RS17155;Name=PKHYL_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17155
NZ_AP019516.1	Protein Homology	CDS	826605	826877	.	-	0	ID=cds-WP_269778247.1;Parent=gene-PKHYL_RS17155;Dbxref=Genbank:WP_269778247.1;Name=WP_269778247.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023411.2;locus_tag=PKHYL_RS17155;product=DUF3486 family protein;protein_id=WP_269778247.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	826881	827192	.	-	.	ID=gene-PKHYL_RS04295;Name=PKHYL_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04295;old_locus_tag=PKHYL_10230
NZ_AP019516.1	Protein Homology	CDS	826881	827192	.	-	0	ID=cds-WP_071002072.1;Parent=gene-PKHYL_RS04295;Dbxref=Genbank:WP_071002072.1;Name=WP_071002072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000006949.1;locus_tag=PKHYL_RS04295;product=hypothetical protein;protein_id=WP_071002072.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	827202	827525	.	-	.	ID=gene-PKHYL_RS04300;Name=PKHYL_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04300;old_locus_tag=PKHYL_10240
NZ_AP019516.1	GeneMarkS-2+	CDS	827202	827525	.	-	0	ID=cds-WP_240366069.1;Parent=gene-PKHYL_RS04300;Dbxref=Genbank:WP_240366069.1;Name=WP_240366069.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04300;product=hypothetical protein;protein_id=WP_240366069.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	827725	828096	.	-	.	ID=gene-PKHYL_RS04305;Name=PKHYL_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04305;old_locus_tag=PKHYL_10250
NZ_AP019516.1	GeneMarkS-2+	CDS	827725	828096	.	-	0	ID=cds-WP_071002069.1;Parent=gene-PKHYL_RS04305;Dbxref=Genbank:WP_071002069.1;Name=WP_071002069.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04305;product=hypothetical protein;protein_id=WP_071002069.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	828196	828846	.	-	.	ID=gene-PKHYL_RS04310;Name=PKHYL_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04310;old_locus_tag=PKHYL_10260
NZ_AP019516.1	Protein Homology	CDS	828196	828846	.	-	0	ID=cds-WP_240366070.1;Parent=gene-PKHYL_RS04310;Dbxref=Genbank:WP_240366070.1;Name=WP_240366070.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013152.2;locus_tag=PKHYL_RS04310;product=lysozyme;protein_id=WP_240366070.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	829310	829570	.	-	.	ID=gene-PKHYL_RS04315;Name=PKHYL_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04315;old_locus_tag=PKHYL_10270
NZ_AP019516.1	GeneMarkS-2+	CDS	829310	829570	.	-	0	ID=cds-WP_240366071.1;Parent=gene-PKHYL_RS04315;Dbxref=Genbank:WP_240366071.1;Name=WP_240366071.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04315;product=hypothetical protein;protein_id=WP_240366071.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	829563	829757	.	-	.	ID=gene-PKHYL_RS04320;Name=PKHYL_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04320;old_locus_tag=PKHYL_10280
NZ_AP019516.1	Protein Homology	CDS	829563	829757	.	-	0	ID=cds-WP_240366072.1;Parent=gene-PKHYL_RS04320;Dbxref=Genbank:WP_240366072.1;Name=WP_240366072.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018011.2;locus_tag=PKHYL_RS04320;product=DUF1018 domain-containing protein;protein_id=WP_240366072.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	829747	830004	.	-	.	ID=gene-PKHYL_RS04325;Name=PKHYL_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04325;old_locus_tag=PKHYL_10290
NZ_AP019516.1	Protein Homology	CDS	829747	830004	.	-	0	ID=cds-WP_240366073.1;Parent=gene-PKHYL_RS04325;Dbxref=Genbank:WP_240366073.1;Name=WP_240366073.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018011.2;locus_tag=PKHYL_RS04325;product=DUF1018 domain-containing protein;protein_id=WP_240366073.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	830630	830797	.	-	.	ID=gene-PKHYL_RS04330;Name=PKHYL_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04330;old_locus_tag=PKHYL_10300
NZ_AP019516.1	GeneMarkS-2+	CDS	830630	830797	.	-	0	ID=cds-WP_240366074.1;Parent=gene-PKHYL_RS04330;Dbxref=Genbank:WP_240366074.1;Name=WP_240366074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04330;product=hypothetical protein;protein_id=WP_240366074.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	830790	831227	.	-	.	ID=gene-PKHYL_RS04335;Name=PKHYL_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04335;old_locus_tag=PKHYL_10310
NZ_AP019516.1	GeneMarkS-2+	CDS	830790	831227	.	-	0	ID=cds-WP_240366075.1;Parent=gene-PKHYL_RS04335;Dbxref=Genbank:WP_240366075.1;Name=WP_240366075.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04335;product=hypothetical protein;protein_id=WP_240366075.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	831354	831638	.	-	.	ID=gene-PKHYL_RS04340;Name=PKHYL_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04340;old_locus_tag=PKHYL_10320
NZ_AP019516.1	GeneMarkS-2+	CDS	831354	831638	.	-	0	ID=cds-WP_240366076.1;Parent=gene-PKHYL_RS04340;Dbxref=Genbank:WP_240366076.1;Name=WP_240366076.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04340;product=hypothetical protein;protein_id=WP_240366076.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	831731	832366	.	-	.	ID=gene-PKHYL_RS04345;Name=PKHYL_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04345;old_locus_tag=PKHYL_10340
NZ_AP019516.1	Protein Homology	CDS	831731	832366	.	-	0	ID=cds-WP_240366077.1;Parent=gene-PKHYL_RS04345;Dbxref=Genbank:WP_240366077.1;Name=WP_240366077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672277.1;locus_tag=PKHYL_RS04345;product=DUF3164 family protein;protein_id=WP_240366077.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	832399	832686	.	-	.	ID=gene-PKHYL_RS04350;Name=PKHYL_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04350;old_locus_tag=PKHYL_10350
NZ_AP019516.1	GeneMarkS-2+	CDS	832399	832686	.	-	0	ID=cds-WP_071002062.1;Parent=gene-PKHYL_RS04350;Dbxref=Genbank:WP_071002062.1;Name=WP_071002062.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04350;product=hypothetical protein;protein_id=WP_071002062.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	832707	832976	.	-	.	ID=gene-PKHYL_RS04355;Name=PKHYL_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04355;old_locus_tag=PKHYL_10360
NZ_AP019516.1	GeneMarkS-2+	CDS	832707	832976	.	-	0	ID=cds-WP_071002061.1;Parent=gene-PKHYL_RS04355;Dbxref=Genbank:WP_071002061.1;Name=WP_071002061.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04355;product=hypothetical protein;protein_id=WP_071002061.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	832963	833385	.	-	.	ID=gene-PKHYL_RS04360;Name=PKHYL_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04360
NZ_AP019516.1	GeneMarkS-2+	CDS	832963	833385	.	-	0	ID=cds-WP_240366078.1;Parent=gene-PKHYL_RS04360;Dbxref=Genbank:WP_240366078.1;Name=WP_240366078.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04360;product=hypothetical protein;protein_id=WP_240366078.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	833373	833621	.	-	.	ID=gene-PKHYL_RS04365;Name=PKHYL_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04365;old_locus_tag=PKHYL_10370
NZ_AP019516.1	GeneMarkS-2+	CDS	833373	833621	.	-	0	ID=cds-WP_071002060.1;Parent=gene-PKHYL_RS04365;Dbxref=Genbank:WP_071002060.1;Name=WP_071002060.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04365;product=hypothetical protein;protein_id=WP_071002060.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	833724	834287	.	-	.	ID=gene-PKHYL_RS04370;Name=PKHYL_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04370;old_locus_tag=PKHYL_10380
NZ_AP019516.1	GeneMarkS-2+	CDS	833724	834287	.	-	0	ID=cds-WP_240366079.1;Parent=gene-PKHYL_RS04370;Dbxref=Genbank:WP_240366079.1;Name=WP_240366079.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04370;product=hypothetical protein;protein_id=WP_240366079.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	834391	835107	.	-	.	ID=gene-PKHYL_RS04375;Name=PKHYL_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04375;old_locus_tag=PKHYL_10390
NZ_AP019516.1	Protein Homology	CDS	834391	835107	.	-	0	ID=cds-WP_240366080.1;Parent=gene-PKHYL_RS04375;Dbxref=Genbank:WP_240366080.1;Name=WP_240366080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004997580.1;locus_tag=PKHYL_RS04375;product=ATP-binding protein;protein_id=WP_240366080.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	835243	835731	.	-	.	ID=gene-PKHYL_RS04380;Name=PKHYL_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04380;old_locus_tag=PKHYL_10400
NZ_AP019516.1	GeneMarkS-2+	CDS	835243	835731	.	-	0	ID=cds-WP_240366081.1;Parent=gene-PKHYL_RS04380;Dbxref=Genbank:WP_240366081.1;Name=WP_240366081.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04380;product=hypothetical protein;protein_id=WP_240366081.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	835821	837542	.	-	.	ID=gene-PKHYL_RS04385;Name=PKHYL_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04385;old_locus_tag=PKHYL_10410
NZ_AP019516.1	Protein Homology	CDS	835821	837542	.	-	0	ID=cds-WP_240366082.1;Parent=gene-PKHYL_RS04385;Dbxref=Genbank:WP_240366082.1;Name=WP_240366082.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012870.2;locus_tag=PKHYL_RS04385;product=transposase family protein;protein_id=WP_240366082.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	837484	837855	.	-	.	ID=gene-PKHYL_RS04390;Name=PKHYL_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04390;old_locus_tag=PKHYL_10420
NZ_AP019516.1	Protein Homology	CDS	837484	837855	.	-	0	ID=cds-WP_240366083.1;Parent=gene-PKHYL_RS04390;Dbxref=Genbank:WP_240366083.1;Name=WP_240366083.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025073.2;locus_tag=PKHYL_RS04390;product=helix-turn-helix domain-containing protein;protein_id=WP_240366083.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	838396	838557	.	+	.	ID=gene-PKHYL_RS04395;Name=PKHYL_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04395;old_locus_tag=PKHYL_10440
NZ_AP019516.1	GeneMarkS-2+	CDS	838396	838557	.	+	0	ID=cds-WP_240366084.1;Parent=gene-PKHYL_RS04395;Dbxref=Genbank:WP_240366084.1;Name=WP_240366084.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04395;product=hypothetical protein;protein_id=WP_240366084.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	839215	839910	.	-	.	ID=gene-PKHYL_RS04400;Name=PKHYL_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04400;old_locus_tag=PKHYL_10450
NZ_AP019516.1	GeneMarkS-2+	CDS	839215	839910	.	-	0	ID=cds-WP_240366085.1;Parent=gene-PKHYL_RS04400;Dbxref=Genbank:WP_240366085.1;Name=WP_240366085.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04400;product=hypothetical protein;protein_id=WP_240366085.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	840299	840631	.	-	.	ID=gene-PKHYL_RS04405;Name=PKHYL_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04405;old_locus_tag=PKHYL_10470
NZ_AP019516.1	Protein Homology	CDS	840299	840631	.	-	0	ID=cds-WP_212564286.1;Parent=gene-PKHYL_RS04405;Dbxref=Genbank:WP_212564286.1;Name=WP_212564286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196450.1;locus_tag=PKHYL_RS04405;product=CopG family transcriptional regulator;protein_id=WP_212564286.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	840821	840896	.	-	.	ID=gene-PKHYL_RS04410;Name=PKHYL_RS04410;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS04410;old_locus_tag=PKHYL_t00180
NZ_AP019516.1	tRNAscan-SE	tRNA	840821	840896	.	-	.	ID=rna-PKHYL_RS04410;Parent=gene-PKHYL_RS04410;anticodon=(pos:complement(840861..840863));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS04410;product=tRNA-Asn
NZ_AP019516.1	tRNAscan-SE	exon	840821	840896	.	-	.	ID=exon-PKHYL_RS04410-1;Parent=rna-PKHYL_RS04410;anticodon=(pos:complement(840861..840863));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS04410;product=tRNA-Asn
NZ_AP019516.1	RefSeq	pseudogene	841389	841734	.	+	.	ID=gene-PKHYL_RS04415;Name=PKHYL_RS04415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04415;old_locus_tag=PKHYL_10480;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	841389	841734	.	+	0	ID=cds-PKHYL_RS04415;Parent=gene-PKHYL_RS04415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005106592.1;locus_tag=PKHYL_RS04415;product=multidrug efflux SMR transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	841736	842329	.	+	.	ID=gene-PKHYL_RS04420;Name=PKHYL_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04420;old_locus_tag=PKHYL_10490
NZ_AP019516.1	Protein Homology	CDS	841736	842329	.	+	0	ID=cds-WP_058023770.1;Parent=gene-PKHYL_RS04420;Dbxref=Genbank:WP_058023770.1;Name=WP_058023770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513214.1;locus_tag=PKHYL_RS04420;product=TetR/AcrR family transcriptional regulator;protein_id=WP_058023770.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	842436	843937	.	+	.	ID=gene-PKHYL_RS04425;Name=betB;gbkey=Gene;gene=betB;gene_biotype=pseudogene;locus_tag=PKHYL_RS04425;old_locus_tag=PKHYL_10500;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	842436	843937	.	+	0	ID=cds-PKHYL_RS04425;Parent=gene-PKHYL_RS04425;Note=frameshifted;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513215.1;locus_tag=PKHYL_RS04425;product=betaine-aldehyde dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	844042	845741	.	+	.	ID=gene-PKHYL_RS04430;Name=betA;gbkey=Gene;gene=betA;gene_biotype=pseudogene;locus_tag=PKHYL_RS04430;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	844042	845741	.	+	0	ID=cds-PKHYL_RS04430;Parent=gene-PKHYL_RS04430;Note=frameshifted;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443151.1;locus_tag=PKHYL_RS04430;product=choline dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	846055	848031	.	+	.	ID=gene-PKHYL_RS04435;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=PKHYL_RS04435;old_locus_tag=PKHYL_10540
NZ_AP019516.1	Protein Homology	CDS	846055	848031	.	+	0	ID=cds-WP_240366086.1;Parent=gene-PKHYL_RS04435;Dbxref=Genbank:WP_240366086.1;Name=WP_240366086.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;gene=betT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: protein motif:HMM:NF007399.1;locus_tag=PKHYL_RS04435;product=choline BCCT transporter BetT;protein_id=WP_240366086.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	848307	848795	.	+	.	ID=gene-PKHYL_RS04440;Name=PKHYL_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04440;old_locus_tag=PKHYL_10550
NZ_AP019516.1	Protein Homology	CDS	848307	848795	.	+	0	ID=cds-WP_058023766.1;Parent=gene-PKHYL_RS04440;Dbxref=Genbank:WP_058023766.1;Name=WP_058023766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443980.1;locus_tag=PKHYL_RS04440;product=M48 family metallopeptidase;protein_id=WP_058023766.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	849183	849641	.	+	.	ID=gene-PKHYL_RS04445;Name=PKHYL_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04445;old_locus_tag=PKHYL_10560
NZ_AP019516.1	Protein Homology	CDS	849183	849641	.	+	0	ID=cds-WP_240366087.1;Parent=gene-PKHYL_RS04445;Dbxref=Genbank:WP_240366087.1;Name=WP_240366087.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013088.2;locus_tag=PKHYL_RS04445;product=DMT family transporter;protein_id=WP_240366087.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	849758	850123	.	+	.	ID=gene-PKHYL_RS04450;Name=PKHYL_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04450;old_locus_tag=PKHYL_10570
NZ_AP019516.1	GeneMarkS-2+	CDS	849758	850123	.	+	0	ID=cds-WP_240366088.1;Parent=gene-PKHYL_RS04450;Dbxref=Genbank:WP_240366088.1;Name=WP_240366088.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04450;product=hypothetical protein;protein_id=WP_240366088.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	850340	850762	.	+	.	ID=gene-PKHYL_RS04455;Name=PKHYL_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04455
NZ_AP019516.1	GeneMarkS-2+	CDS	850340	850762	.	+	0	ID=cds-WP_240366089.1;Parent=gene-PKHYL_RS04455;Dbxref=Genbank:WP_240366089.1;Name=WP_240366089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04455;product=hypothetical protein;protein_id=WP_240366089.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	850777	851973	.	+	.	ID=gene-PKHYL_RS04460;Name=PKHYL_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04460;old_locus_tag=PKHYL_10590
NZ_AP019516.1	Protein Homology	CDS	850777	851973	.	+	0	ID=cds-WP_240366090.1;Parent=gene-PKHYL_RS04460;Dbxref=Genbank:WP_240366090.1;Name=WP_240366090.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014443.2;locus_tag=PKHYL_RS04460;product=hypothetical protein;protein_id=WP_240366090.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	851978	852100	.	+	.	ID=gene-PKHYL_RS17160;Name=PKHYL_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17160
NZ_AP019516.1	GeneMarkS-2+	CDS	851978	852100	.	+	0	ID=cds-WP_269778248.1;Parent=gene-PKHYL_RS17160;Dbxref=Genbank:WP_269778248.1;Name=WP_269778248.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17160;product=hypothetical protein;protein_id=WP_269778248.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	852179	852520	.	+	.	ID=gene-PKHYL_RS04465;Name=PKHYL_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04465;old_locus_tag=PKHYL_10600
NZ_AP019516.1	Protein Homology	CDS	852179	852520	.	+	0	ID=cds-WP_240366091.1;Parent=gene-PKHYL_RS04465;Dbxref=Genbank:WP_240366091.1;Name=WP_240366091.1;Ontology_term=GO:0006813;gbkey=CDS;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: protein motif:HMM:NF014325.2;locus_tag=PKHYL_RS04465;product=NAD-binding protein;protein_id=WP_240366091.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	852617	852880	.	+	.	ID=gene-PKHYL_RS04470;Name=PKHYL_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04470;old_locus_tag=PKHYL_10610
NZ_AP019516.1	Protein Homology	CDS	852617	852880	.	+	0	ID=cds-WP_240366092.1;Parent=gene-PKHYL_RS04470;Dbxref=Genbank:WP_240366092.1;Name=WP_240366092.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014171.2;locus_tag=PKHYL_RS04470;product=TrkA C-terminal domain-containing protein;protein_id=WP_240366092.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	852924	853465	.	+	.	ID=gene-PKHYL_RS04475;Name=PKHYL_RS04475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04475;old_locus_tag=PKHYL_10620;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	852924	853465	.	+	0	ID=cds-PKHYL_RS04475;Parent=gene-PKHYL_RS04475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022766.2;locus_tag=PKHYL_RS04475;product=DUF3124 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	853528	853941	.	+	.	ID=gene-PKHYL_RS04480;Name=PKHYL_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04480;old_locus_tag=PKHYL_10630
NZ_AP019516.1	Protein Homology	CDS	853528	853941	.	+	0	ID=cds-WP_058023760.1;Parent=gene-PKHYL_RS04480;Dbxref=Genbank:WP_058023760.1;Name=WP_058023760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004815182.1;locus_tag=PKHYL_RS04480;product=PaaI family thioesterase;protein_id=WP_058023760.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	853988	854292	.	-	.	ID=gene-PKHYL_RS04485;Name=PKHYL_RS04485;end_range=854292,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04485;old_locus_tag=PKHYL_10640;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	853988	854292	.	-	0	ID=cds-PKHYL_RS04485;Parent=gene-PKHYL_RS04485;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=854292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514100.1;locus_tag=PKHYL_RS04485;partial=true;product=cytochrome c;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	854351	854698	.	-	.	ID=gene-PKHYL_RS04490;Name=PKHYL_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04490;old_locus_tag=PKHYL_10650
NZ_AP019516.1	Protein Homology	CDS	854351	854698	.	-	0	ID=cds-WP_240366093.1;Parent=gene-PKHYL_RS04490;Dbxref=Genbank:WP_240366093.1;Name=WP_240366093.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012264.2;locus_tag=PKHYL_RS04490;product=cytochrome c;protein_id=WP_240366093.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	854646	854852	.	-	.	ID=gene-PKHYL_RS04495;Name=PKHYL_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04495;old_locus_tag=PKHYL_10660
NZ_AP019516.1	GeneMarkS-2+	CDS	854646	854852	.	-	0	ID=cds-WP_240366094.1;Parent=gene-PKHYL_RS04495;Dbxref=Genbank:WP_240366094.1;Name=WP_240366094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04495;product=hypothetical protein;protein_id=WP_240366094.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	854957	855499	.	-	.	ID=gene-PKHYL_RS04500;Name=PKHYL_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04500;old_locus_tag=PKHYL_10670
NZ_AP019516.1	Protein Homology	CDS	854957	855499	.	-	0	ID=cds-WP_240366095.1;Parent=gene-PKHYL_RS04500;Dbxref=Genbank:WP_240366095.1;Name=WP_240366095.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013718.2;locus_tag=PKHYL_RS04500;product=phosphatase PAP2 family protein;protein_id=WP_240366095.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	855507	855752	.	-	.	ID=gene-PKHYL_RS04505;Name=PKHYL_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04505;old_locus_tag=PKHYL_10680
NZ_AP019516.1	GeneMarkS-2+	CDS	855507	855752	.	-	0	ID=cds-WP_240366096.1;Parent=gene-PKHYL_RS04505;Dbxref=Genbank:WP_240366096.1;Name=WP_240366096.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04505;product=phosphatase PAP2 family protein;protein_id=WP_240366096.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	855845	856313	.	-	.	ID=gene-PKHYL_RS04510;Name=PKHYL_RS04510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04510;old_locus_tag=PKHYL_10690;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	855845	856313	.	-	0	ID=cds-PKHYL_RS04510;Parent=gene-PKHYL_RS04510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199357.1;locus_tag=PKHYL_RS04510;product=diacylglycerol kinase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	856553	857539	.	-	.	ID=gene-PKHYL_RS04515;Name=PKHYL_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04515;old_locus_tag=PKHYL_10700
NZ_AP019516.1	Protein Homology	CDS	856553	857539	.	-	0	ID=cds-WP_240366097.1;Parent=gene-PKHYL_RS04515;Dbxref=Genbank:WP_240366097.1;Name=WP_240366097.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=PKHYL_RS04515;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_240366097.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	857536	857760	.	-	.	ID=gene-PKHYL_RS04520;Name=PKHYL_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04520;old_locus_tag=PKHYL_10710
NZ_AP019516.1	GeneMarkS-2+	CDS	857536	857760	.	-	0	ID=cds-WP_240366098.1;Parent=gene-PKHYL_RS04520;Dbxref=Genbank:WP_240366098.1;Name=WP_240366098.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04520;product=hypothetical protein;protein_id=WP_240366098.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	857976	858677	.	-	.	ID=gene-PKHYL_RS04525;Name=PKHYL_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04525;old_locus_tag=PKHYL_10720
NZ_AP019516.1	Protein Homology	CDS	857976	858677	.	-	0	ID=cds-WP_240366099.1;Parent=gene-PKHYL_RS04525;Dbxref=Genbank:WP_240366099.1;Name=WP_240366099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960313.1;locus_tag=PKHYL_RS04525;product=response regulator transcription factor;protein_id=WP_240366099.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	858741	860437	.	-	.	ID=gene-PKHYL_RS04530;Name=PKHYL_RS04530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04530;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	858741	860437	.	-	0	ID=cds-PKHYL_RS04530;Parent=gene-PKHYL_RS04530;Note=frameshifted;Ontology_term=GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199351.1;locus_tag=PKHYL_RS04530;product=phosphoethanolamine--lipid A transferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	860598	861287	.	-	.	ID=gene-PKHYL_RS04535;Name=PKHYL_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04535;old_locus_tag=PKHYL_10750
NZ_AP019516.1	Protein Homology	CDS	860598	861287	.	-	0	ID=cds-WP_212564292.1;Parent=gene-PKHYL_RS04535;Dbxref=Genbank:WP_212564292.1;Name=WP_212564292.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012257.2;locus_tag=PKHYL_RS04535;product=Crp/Fnr family transcriptional regulator;protein_id=WP_212564292.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	861373	862164	.	+	.	ID=gene-PKHYL_RS04540;Name=PKHYL_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04540;old_locus_tag=PKHYL_10760
NZ_AP019516.1	Protein Homology	CDS	861373	862164	.	+	0	ID=cds-WP_240366100.1;Parent=gene-PKHYL_RS04540;Dbxref=Genbank:WP_240366100.1;Name=WP_240366100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198608.1;locus_tag=PKHYL_RS04540;product=class II aldolase/adducin family protein;protein_id=WP_240366100.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	862581	862733	.	+	.	ID=gene-PKHYL_RS04545;Name=PKHYL_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04545
NZ_AP019516.1	GeneMarkS-2+	CDS	862581	862733	.	+	0	ID=cds-WP_240366101.1;Parent=gene-PKHYL_RS04545;Dbxref=Genbank:WP_240366101.1;Name=WP_240366101.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04545;product=hypothetical protein;protein_id=WP_240366101.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	862705	863742	.	+	.	ID=gene-PKHYL_RS04550;Name=PKHYL_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04550;old_locus_tag=PKHYL_10770
NZ_AP019516.1	GeneMarkS-2+	CDS	862705	863742	.	+	0	ID=cds-WP_240366102.1;Parent=gene-PKHYL_RS04550;Dbxref=Genbank:WP_240366102.1;Name=WP_240366102.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04550;product=cache domain-containing protein;protein_id=WP_240366102.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	863751	864200	.	+	.	ID=gene-PKHYL_RS04555;Name=PKHYL_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04555;old_locus_tag=PKHYL_10780
NZ_AP019516.1	GeneMarkS-2+	CDS	863751	864200	.	+	0	ID=cds-WP_240366103.1;Parent=gene-PKHYL_RS04555;Dbxref=Genbank:WP_240366103.1;Name=WP_240366103.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04555;product=hypothetical protein;protein_id=WP_240366103.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	864101	864937	.	+	.	ID=gene-PKHYL_RS04560;Name=PKHYL_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04560;old_locus_tag=PKHYL_10790
NZ_AP019516.1	Protein Homology	CDS	864101	864937	.	+	0	ID=cds-WP_240366104.1;Parent=gene-PKHYL_RS04560;Dbxref=Genbank:WP_240366104.1;Name=WP_240366104.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012722.2;locus_tag=PKHYL_RS04560;product=ATP-binding protein;protein_id=WP_240366104.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	864971	865903	.	+	.	ID=gene-PKHYL_RS04565;Name=PKHYL_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04565;old_locus_tag=PKHYL_10800
NZ_AP019516.1	Protein Homology	CDS	864971	865903	.	+	0	ID=cds-WP_071002039.1;Parent=gene-PKHYL_RS04565;Dbxref=Genbank:WP_071002039.1;Name=WP_071002039.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443905.1;locus_tag=PKHYL_RS04565;product=response regulator;protein_id=WP_071002039.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	866027	866308	.	-	.	ID=gene-PKHYL_RS04570;Name=PKHYL_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04570;old_locus_tag=PKHYL_10810
NZ_AP019516.1	GeneMarkS-2+	CDS	866027	866308	.	-	0	ID=cds-WP_240366105.1;Parent=gene-PKHYL_RS04570;Dbxref=Genbank:WP_240366105.1;Name=WP_240366105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04570;product=hypothetical protein;protein_id=WP_240366105.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	866430	866597	.	+	.	ID=gene-PKHYL_RS04575;Name=PKHYL_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04575;old_locus_tag=PKHYL_10820
NZ_AP019516.1	GeneMarkS-2+	CDS	866430	866597	.	+	0	ID=cds-WP_227517181.1;Parent=gene-PKHYL_RS04575;Dbxref=Genbank:WP_227517181.1;Name=WP_227517181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04575;product=hypothetical protein;protein_id=WP_227517181.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	866749	867444	.	-	.	ID=gene-PKHYL_RS04580;Name=PKHYL_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04580;old_locus_tag=PKHYL_10830
NZ_AP019516.1	Protein Homology	CDS	866749	867444	.	-	0	ID=cds-WP_071002038.1;Parent=gene-PKHYL_RS04580;Dbxref=Genbank:WP_071002038.1;Name=WP_071002038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443426.1;locus_tag=PKHYL_RS04580;product=hypothetical protein;protein_id=WP_071002038.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	867612	867884	.	-	.	ID=gene-PKHYL_RS04585;Name=PKHYL_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04585;old_locus_tag=PKHYL_10840
NZ_AP019516.1	GeneMarkS-2+	CDS	867612	867884	.	-	0	ID=cds-WP_071002037.1;Parent=gene-PKHYL_RS04585;Dbxref=Genbank:WP_071002037.1;Name=WP_071002037.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04585;product=hypothetical protein;protein_id=WP_071002037.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	868457	869026	.	+	.	ID=gene-PKHYL_RS17165;Name=PKHYL_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17165;old_locus_tag=PKHYL_10850
NZ_AP019516.1	Protein Homology	CDS	868457	869026	.	+	0	ID=cds-WP_269778249.1;Parent=gene-PKHYL_RS17165;Dbxref=Genbank:WP_269778249.1;Name=WP_269778249.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=PKHYL_RS17165;product=LysR substrate-binding domain-containing protein;protein_id=WP_269778249.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	869023	869286	.	+	.	ID=gene-PKHYL_RS17170;Name=PKHYL_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17170;old_locus_tag=PKHYL_10860
NZ_AP019516.1	Protein Homology	CDS	869023	869286	.	+	0	ID=cds-WP_269778311.1;Parent=gene-PKHYL_RS17170;Dbxref=Genbank:WP_269778311.1;Name=WP_269778311.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=PKHYL_RS17170;product=LysR substrate-binding domain-containing protein;protein_id=WP_269778311.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	869656	871080	.	+	.	ID=gene-PKHYL_RS04595;Name=PKHYL_RS04595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04595;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	869656	871080	.	+	0	ID=cds-PKHYL_RS04595;Parent=gene-PKHYL_RS04595;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011182339.1;locus_tag=PKHYL_RS04595;product=aspartate ammonia-lyase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	871153	871650	.	-	.	ID=gene-PKHYL_RS17175;Name=PKHYL_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17175;old_locus_tag=PKHYL_10890
NZ_AP019516.1	GeneMarkS-2+	CDS	871153	871650	.	-	0	ID=cds-WP_269778250.1;Parent=gene-PKHYL_RS17175;Dbxref=Genbank:WP_269778250.1;Name=WP_269778250.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17175;product=hypothetical protein;protein_id=WP_269778250.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	871686	871856	.	-	.	ID=gene-PKHYL_RS17180;Name=PKHYL_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17180;old_locus_tag=PKHYL_10900
NZ_AP019516.1	GeneMarkS-2+	CDS	871686	871856	.	-	0	ID=cds-WP_269778251.1;Parent=gene-PKHYL_RS17180;Dbxref=Genbank:WP_269778251.1;Name=WP_269778251.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17180;product=hypothetical protein;protein_id=WP_269778251.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	871853	872200	.	-	.	ID=gene-PKHYL_RS17185;Name=PKHYL_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17185;old_locus_tag=PKHYL_10910
NZ_AP019516.1	Protein Homology	CDS	871853	872200	.	-	0	ID=cds-WP_269778252.1;Parent=gene-PKHYL_RS17185;Dbxref=Genbank:WP_269778252.1;Name=WP_269778252.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: protein motif:HMM:NF013633.2;locus_tag=PKHYL_RS17185;product=S4 domain-containing protein;protein_id=WP_269778252.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	872312	872590	.	-	.	ID=gene-PKHYL_RS04605;Name=PKHYL_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04605;old_locus_tag=PKHYL_10920
NZ_AP019516.1	Protein Homology	CDS	872312	872590	.	-	0	ID=cds-WP_240366106.1;Parent=gene-PKHYL_RS04605;Dbxref=Genbank:WP_240366106.1;Name=WP_240366106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008215675.1;locus_tag=PKHYL_RS04605;product=peptidylprolyl isomerase;protein_id=WP_240366106.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	872765	873620	.	-	.	ID=gene-PKHYL_RS04610;Name=PKHYL_RS04610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04610;old_locus_tag=PKHYL_10930;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	872765	873620	.	-	0	ID=cds-PKHYL_RS04610;Parent=gene-PKHYL_RS04610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009512159.1;locus_tag=PKHYL_RS04610;product=patatin family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	873767	874222	.	-	.	ID=gene-PKHYL_RS04615;Name=PKHYL_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04615;old_locus_tag=PKHYL_10940
NZ_AP019516.1	Protein Homology	CDS	873767	874222	.	-	0	ID=cds-WP_240366107.1;Parent=gene-PKHYL_RS04615;Dbxref=Genbank:WP_240366107.1;Name=WP_240366107.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=PKHYL_RS04615;product=integrase core domain-containing protein;protein_id=WP_240366107.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	875124	876287	.	+	.	ID=gene-PKHYL_RS04620;Name=PKHYL_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04620;old_locus_tag=PKHYL_10950
NZ_AP019516.1	Protein Homology	CDS	875124	876287	.	+	0	ID=cds-WP_025645663.1;Parent=gene-PKHYL_RS04620;Dbxref=Genbank:WP_025645663.1;Name=WP_025645663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004994878.1;locus_tag=PKHYL_RS04620;product=glutathione-dependent formaldehyde dehydrogenase;protein_id=WP_025645663.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	876501	876701	.	-	.	ID=gene-PKHYL_RS04625;Name=PKHYL_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04625;old_locus_tag=PKHYL_10960
NZ_AP019516.1	Protein Homology	CDS	876501	876701	.	-	0	ID=cds-WP_222436693.1;Parent=gene-PKHYL_RS04625;Dbxref=Genbank:WP_222436693.1;Name=WP_222436693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003668143.1;locus_tag=PKHYL_RS04625;product=hypothetical protein;protein_id=WP_222436693.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	876830	877425	.	+	.	ID=gene-PKHYL_RS04630;Name=PKHYL_RS04630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04630;old_locus_tag=PKHYL_10970;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	876830	877425	.	+	0	ID=cds-PKHYL_RS04630;Parent=gene-PKHYL_RS04630;Note=frameshifted;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512336.1;locus_tag=PKHYL_RS04630;product=recombinase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	877593	877724	.	+	.	ID=gene-PKHYL_RS17190;Name=PKHYL_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17190
NZ_AP019516.1	GeneMarkS-2+	CDS	877593	877724	.	+	0	ID=cds-WP_267448022.1;Parent=gene-PKHYL_RS17190;Dbxref=Genbank:WP_267448022.1;Name=WP_267448022.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17190;product=hypothetical protein;protein_id=WP_267448022.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	877741	878530	.	+	.	ID=gene-PKHYL_RS04635;Name=PKHYL_RS04635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04635;partial=true;pseudo=true;start_range=.,877741
NZ_AP019516.1	Protein Homology	CDS	877741	878530	.	+	0	ID=cds-PKHYL_RS04635;Parent=gene-PKHYL_RS04635;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611467.1;locus_tag=PKHYL_RS04635;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,877741;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	878761	879049	.	-	.	ID=gene-PKHYL_RS04640;Name=PKHYL_RS04640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04640;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	878761	879049	.	-	0	ID=cds-PKHYL_RS04640;Parent=gene-PKHYL_RS04640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004769414.1;locus_tag=PKHYL_RS04640;product=putative quinol monooxygenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	879070	879227	.	-	.	ID=gene-PKHYL_RS04645;Name=PKHYL_RS04645;end_range=879227,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04645;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	879070	879227	.	-	0	ID=cds-PKHYL_RS04645;Parent=gene-PKHYL_RS04645;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=879227,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005400056.1;locus_tag=PKHYL_RS04645;partial=true;product=zinc-binding dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	879268	880341	.	-	.	ID=gene-PKHYL_RS04650;Name=PKHYL_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04650;old_locus_tag=PKHYL_10990
NZ_AP019516.1	Protein Homology	CDS	879268	880341	.	-	0	ID=cds-WP_240365295.1;Parent=gene-PKHYL_RS04650;Dbxref=Genbank:WP_240365295.1;Name=WP_240365295.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611560.1;locus_tag=PKHYL_RS04650;product=IS3 family transposase;protein_id=WP_240365295.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	880409	881258	.	-	.	ID=gene-PKHYL_RS04655;Name=PKHYL_RS04655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04655;partial=true;pseudo=true;start_range=.,880409
NZ_AP019516.1	Protein Homology	CDS	880409	881258	.	-	0	ID=cds-PKHYL_RS04655;Parent=gene-PKHYL_RS04655;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005400056.1;locus_tag=PKHYL_RS04655;partial=true;product=zinc-binding alcohol dehydrogenase family protein;pseudo=true;start_range=.,880409;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	881330	882071	.	-	.	ID=gene-PKHYL_RS04660;Name=PKHYL_RS04660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04660;old_locus_tag=PKHYL_11020;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	881330	882071	.	-	0	ID=cds-PKHYL_RS04660;Parent=gene-PKHYL_RS04660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017397564.1;locus_tag=PKHYL_RS04660;product=SDR family oxidoreductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	882206	883104	.	+	.	ID=gene-PKHYL_RS04665;Name=PKHYL_RS04665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04665;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	882206	883104	.	+	0	ID=cds-PKHYL_RS04665;Parent=gene-PKHYL_RS04665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005093666.1;locus_tag=PKHYL_RS04665;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	883364	884413	.	-	.	ID=gene-PKHYL_RS04670;Name=PKHYL_RS04670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04670;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	883364	884413	.	-	0	ID=cds-PKHYL_RS04670;Parent=gene-PKHYL_RS04670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005093663.1;locus_tag=PKHYL_RS04670;product=zinc-dependent alcohol dehydrogenase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	884403	885398	.	-	.	ID=gene-PKHYL_RS04675;Name=PKHYL_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04675;old_locus_tag=PKHYL_11060
NZ_AP019516.1	Protein Homology	CDS	884403	885398	.	-	0	ID=cds-WP_240366108.1;Parent=gene-PKHYL_RS04675;Dbxref=Genbank:WP_240366108.1;Name=WP_240366108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004647735.1;locus_tag=PKHYL_RS04675;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_240366108.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	885658	886365	.	-	.	ID=gene-PKHYL_RS04680;Name=PKHYL_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04680;old_locus_tag=PKHYL_11070
NZ_AP019516.1	Protein Homology	CDS	885658	886365	.	-	0	ID=cds-WP_240366109.1;Parent=gene-PKHYL_RS04680;Dbxref=Genbank:WP_240366109.1;Name=WP_240366109.1;Ontology_term=GO:0006813;gbkey=CDS;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: protein motif:HMM:NF014325.2;locus_tag=PKHYL_RS04680;product=NAD-binding protein;protein_id=WP_240366109.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	886362	886622	.	-	.	ID=gene-PKHYL_RS04685;Name=PKHYL_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04685;old_locus_tag=PKHYL_11080
NZ_AP019516.1	Protein Homology	CDS	886362	886622	.	-	0	ID=cds-WP_240366493.1;Parent=gene-PKHYL_RS04685;Dbxref=Genbank:WP_240366493.1;Name=WP_240366493.1;Ontology_term=GO:0006812,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013188.2;locus_tag=PKHYL_RS04685;product=cation:proton antiporter;protein_id=WP_240366493.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	886568	886930	.	-	.	ID=gene-PKHYL_RS04690;Name=PKHYL_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04690;old_locus_tag=PKHYL_11090
NZ_AP019516.1	Protein Homology	CDS	886568	886930	.	-	0	ID=cds-WP_240366110.1;Parent=gene-PKHYL_RS04690;Dbxref=Genbank:WP_240366110.1;Name=WP_240366110.1;Ontology_term=GO:0006812,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013188.2;locus_tag=PKHYL_RS04690;product=cation:proton antiporter;protein_id=WP_240366110.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	887161	887307	.	-	.	ID=gene-PKHYL_RS04695;Name=PKHYL_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04695
NZ_AP019516.1	Protein Homology	CDS	887161	887307	.	-	0	ID=cds-WP_240366111.1;Parent=gene-PKHYL_RS04695;Dbxref=Genbank:WP_240366111.1;Name=WP_240366111.1;Ontology_term=GO:0006812,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013188.2;locus_tag=PKHYL_RS04695;product=cation:proton antiporter;protein_id=WP_240366111.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	887659	887778	.	+	.	ID=gene-PKHYL_RS04700;Name=PKHYL_RS04700;end_range=887778,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04700;old_locus_tag=PKHYL_11100;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	887659	887778	.	+	0	ID=cds-PKHYL_RS04700;Parent=gene-PKHYL_RS04700;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=887778,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001133625.1;locus_tag=PKHYL_RS04700;partial=true;product=metal/formaldehyde-sensitive transcriptional repressor;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	887921	888235	.	+	.	ID=gene-PKHYL_RS04705;Name=PKHYL_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04705;old_locus_tag=PKHYL_11110
NZ_AP019516.1	Protein Homology	CDS	887921	888235	.	+	0	ID=cds-WP_058024906.1;Parent=gene-PKHYL_RS04705;Dbxref=Genbank:WP_058024906.1;Name=WP_058024906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004812141.1;locus_tag=PKHYL_RS04705;product=hypothetical protein;protein_id=WP_058024906.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	889405	889752	.	-	.	ID=gene-PKHYL_RS04710;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=PKHYL_RS04710;old_locus_tag=PKHYL_11120
NZ_AP019516.1	Protein Homology	CDS	889405	889752	.	-	0	ID=cds-WP_240366112.1;Parent=gene-PKHYL_RS04710;Dbxref=Genbank:WP_240366112.1;Name=WP_240366112.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513651.1;locus_tag=PKHYL_RS04710;product=nitrite reductase small subunit NirD;protein_id=WP_240366112.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	889842	892425	.	-	.	ID=gene-PKHYL_RS04715;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=pseudogene;locus_tag=PKHYL_RS04715;old_locus_tag=PKHYL_11150;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	889842	892425	.	-	0	ID=cds-PKHYL_RS04715;Parent=gene-PKHYL_RS04715;Note=frameshifted;Ontology_term=GO:0042128,GO:0008942,GO:0016491,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513652.1;locus_tag=PKHYL_RS04715;product=nitrite reductase large subunit NirB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	893150	893449	.	+	.	ID=gene-PKHYL_RS04720;Name=PKHYL_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04720
NZ_AP019516.1	Protein Homology	CDS	893150	893449	.	+	0	ID=cds-WP_240366494.1;Parent=gene-PKHYL_RS04720;Dbxref=Genbank:WP_240366494.1;Name=WP_240366494.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=PKHYL_RS04720;product=MFS transporter;protein_id=WP_240366494.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	893618	894538	.	+	.	ID=gene-PKHYL_RS04725;Name=PKHYL_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04725;old_locus_tag=PKHYL_11160
NZ_AP019516.1	Protein Homology	CDS	893618	894538	.	+	0	ID=cds-WP_240366113.1;Parent=gene-PKHYL_RS04725;Dbxref=Genbank:WP_240366113.1;Name=WP_240366113.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=PKHYL_RS04725;product=MFS transporter;protein_id=WP_240366113.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	894542	895882	.	+	.	ID=gene-PKHYL_RS04730;Name=PKHYL_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04730;old_locus_tag=PKHYL_11170
NZ_AP019516.1	Protein Homology	CDS	894542	895882	.	+	0	ID=cds-WP_240366114.1;Parent=gene-PKHYL_RS04730;Dbxref=Genbank:WP_240366114.1;Name=WP_240366114.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025053.2;locus_tag=PKHYL_RS04730;product=protein phosphatase 2C domain-containing protein;protein_id=WP_240366114.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	895918	896631	.	+	.	ID=gene-PKHYL_RS04735;Name=PKHYL_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04735;old_locus_tag=PKHYL_11180
NZ_AP019516.1	Protein Homology	CDS	895918	896631	.	+	0	ID=cds-WP_240366115.1;Parent=gene-PKHYL_RS04735;Dbxref=Genbank:WP_240366115.1;Name=WP_240366115.1;Ontology_term=GO:0006468,GO:0004672;gbkey=CDS;go_function=protein kinase activity|0004672||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: protein motif:HMM:NF019334.2;locus_tag=PKHYL_RS04735;product=protein kinase;protein_id=WP_240366115.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	896697	897197	.	+	.	ID=gene-PKHYL_RS17195;Name=PKHYL_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17195;old_locus_tag=PKHYL_11190
NZ_AP019516.1	Protein Homology	CDS	896697	897197	.	+	0	ID=cds-WP_269778253.1;Parent=gene-PKHYL_RS17195;Dbxref=Genbank:WP_269778253.1;Name=WP_269778253.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF019604.2;locus_tag=PKHYL_RS17195;product=FAD-dependent oxidoreductase;protein_id=WP_269778253.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	897244	898137	.	+	.	ID=gene-PKHYL_RS17200;Name=PKHYL_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17200;old_locus_tag=PKHYL_11200
NZ_AP019516.1	Protein Homology	CDS	897244	898137	.	+	0	ID=cds-WP_269778254.1;Parent=gene-PKHYL_RS17200;Dbxref=Genbank:WP_269778254.1;Name=WP_269778254.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF019604.2;locus_tag=PKHYL_RS17200;product=FAD-dependent oxidoreductase;protein_id=WP_269778254.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	898134	900086	.	+	.	ID=gene-PKHYL_RS04750;Name=PKHYL_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04750;old_locus_tag=PKHYL_11210
NZ_AP019516.1	Protein Homology	CDS	898134	900086	.	+	0	ID=cds-WP_240366116.1;Parent=gene-PKHYL_RS04750;Dbxref=Genbank:WP_240366116.1;Name=WP_240366116.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012602.2;locus_tag=PKHYL_RS04750;product=molybdopterin-dependent oxidoreductase;protein_id=WP_240366116.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	900172	901314	.	+	.	ID=gene-PKHYL_RS04755;Name=PKHYL_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04755;old_locus_tag=PKHYL_11220
NZ_AP019516.1	Protein Homology	CDS	900172	901314	.	+	0	ID=cds-WP_240366117.1;Parent=gene-PKHYL_RS04755;Dbxref=Genbank:WP_240366117.1;Name=WP_240366117.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013717.2;locus_tag=PKHYL_RS04755;product=(2Fe-2S)-binding protein;protein_id=WP_240366117.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	901556	902038	.	+	.	ID=gene-PKHYL_RS17205;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=PKHYL_RS17205;old_locus_tag=PKHYL_11230
NZ_AP019516.1	Protein Homology	CDS	901556	902038	.	+	0	ID=cds-WP_269778255.1;Parent=gene-PKHYL_RS17205;Dbxref=Genbank:WP_269778255.1;Name=WP_269778255.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: protein motif:HMM:NF004790.0;locus_tag=PKHYL_RS17205;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_269778255.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	902065	902382	.	+	.	ID=gene-PKHYL_RS17210;Name=PKHYL_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17210;old_locus_tag=PKHYL_11240
NZ_AP019516.1	Protein Homology	CDS	902065	902382	.	+	0	ID=cds-WP_269778256.1;Parent=gene-PKHYL_RS17210;Dbxref=Genbank:WP_269778256.1;Name=WP_269778256.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012799.2;locus_tag=PKHYL_RS17210;product=hypothetical protein;protein_id=WP_269778256.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	902675	902749	.	-	.	ID=gene-PKHYL_RS04765;Name=PKHYL_RS04765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04765;partial=true;pseudo=true;start_range=.,902675
NZ_AP019516.1	Protein Homology	CDS	902675	902749	.	-	0	ID=cds-PKHYL_RS04765;Parent=gene-PKHYL_RS04765;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959554.1;locus_tag=PKHYL_RS04765;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,902675;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	902825	903656	.	+	.	ID=gene-PKHYL_RS04770;Name=PKHYL_RS04770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04770;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	902825	903656	.	+	0	ID=cds-PKHYL_RS04770;Parent=gene-PKHYL_RS04770;Note=frameshifted;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015815822.1;locus_tag=PKHYL_RS04770;product=cation transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	903756	903899	.	+	.	ID=gene-PKHYL_RS04775;Name=PKHYL_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04775
NZ_AP019516.1	GeneMarkS-2+	CDS	903756	903899	.	+	0	ID=cds-WP_178377961.1;Parent=gene-PKHYL_RS04775;Dbxref=Genbank:WP_178377961.1;Name=WP_178377961.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04775;product=hypothetical protein;protein_id=WP_178377961.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	904940	905209	.	-	.	ID=gene-PKHYL_RS04780;Name=PKHYL_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04780;old_locus_tag=PKHYL_11300
NZ_AP019516.1	GeneMarkS-2+	CDS	904940	905209	.	-	0	ID=cds-WP_240366118.1;Parent=gene-PKHYL_RS04780;Dbxref=Genbank:WP_240366118.1;Name=WP_240366118.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04780;product=hypothetical protein;protein_id=WP_240366118.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	905167	906054	.	-	.	ID=gene-PKHYL_RS04785;Name=PKHYL_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04785;old_locus_tag=PKHYL_11310
NZ_AP019516.1	GeneMarkS-2+	CDS	905167	906054	.	-	0	ID=cds-WP_240366119.1;Parent=gene-PKHYL_RS04785;Dbxref=Genbank:WP_240366119.1;Name=WP_240366119.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04785;product=hypothetical protein;protein_id=WP_240366119.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	906353	907561	.	-	.	ID=gene-PKHYL_RS04790;Name=PKHYL_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04790;old_locus_tag=PKHYL_11320
NZ_AP019516.1	GeneMarkS-2+	CDS	906353	907561	.	-	0	ID=cds-WP_240366120.1;Parent=gene-PKHYL_RS04790;Dbxref=Genbank:WP_240366120.1;Name=WP_240366120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04790;product=hypothetical protein;protein_id=WP_240366120.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	907689	908276	.	-	.	ID=gene-PKHYL_RS04795;Name=PKHYL_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04795;old_locus_tag=PKHYL_11330
NZ_AP019516.1	GeneMarkS-2+	CDS	907689	908276	.	-	0	ID=cds-WP_240366121.1;Parent=gene-PKHYL_RS04795;Dbxref=Genbank:WP_240366121.1;Name=WP_240366121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04795;product=hypothetical protein;protein_id=WP_240366121.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	908263	908625	.	-	.	ID=gene-PKHYL_RS04800;Name=PKHYL_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04800;old_locus_tag=PKHYL_11340
NZ_AP019516.1	GeneMarkS-2+	CDS	908263	908625	.	-	0	ID=cds-WP_240366122.1;Parent=gene-PKHYL_RS04800;Dbxref=Genbank:WP_240366122.1;Name=WP_240366122.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04800;product=hypothetical protein;protein_id=WP_240366122.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	908588	910744	.	-	.	ID=gene-PKHYL_RS04805;Name=PKHYL_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04805;old_locus_tag=PKHYL_11350
NZ_AP019516.1	GeneMarkS-2+	CDS	908588	910744	.	-	0	ID=cds-WP_240366123.1;Parent=gene-PKHYL_RS04805;Dbxref=Genbank:WP_240366123.1;Name=WP_240366123.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04805;product=hypothetical protein;protein_id=WP_240366123.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	910741	911256	.	-	.	ID=gene-PKHYL_RS04810;Name=PKHYL_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04810;old_locus_tag=PKHYL_11360
NZ_AP019516.1	GeneMarkS-2+	CDS	910741	911256	.	-	0	ID=cds-WP_071002011.1;Parent=gene-PKHYL_RS04810;Dbxref=Genbank:WP_071002011.1;Name=WP_071002011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04810;product=hypothetical protein;protein_id=WP_071002011.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	911630	912055	.	-	.	ID=gene-PKHYL_RS04815;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=PKHYL_RS04815;old_locus_tag=PKHYL_11370
NZ_AP019516.1	Protein Homology	CDS	911630	912055	.	-	0	ID=cds-WP_025645154.1;Parent=gene-PKHYL_RS04815;Dbxref=Genbank:WP_025645154.1;Name=WP_025645154.1;Ontology_term=GO:0003677;gbkey=CDS;gene=umuD;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443861.1;locus_tag=PKHYL_RS04815;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_025645154.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	912072	912182	.	-	.	ID=gene-PKHYL_RS04820;Name=PKHYL_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04820
NZ_AP019516.1	Protein Homology	CDS	912072	912182	.	-	0	ID=cds-WP_240366124.1;Parent=gene-PKHYL_RS04820;Dbxref=Genbank:WP_240366124.1;Name=WP_240366124.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024830.2;locus_tag=PKHYL_RS04820;product=DUF4113 domain-containing protein;protein_id=WP_240366124.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	912134	912844	.	-	.	ID=gene-PKHYL_RS04825;Name=PKHYL_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04825
NZ_AP019516.1	Protein Homology	CDS	912134	912844	.	-	0	ID=cds-WP_240366125.1;Parent=gene-PKHYL_RS04825;Dbxref=Genbank:WP_240366125.1;Name=WP_240366125.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023227.2;locus_tag=PKHYL_RS04825;product=hypothetical protein;protein_id=WP_240366125.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	912792	913382	.	-	.	ID=gene-PKHYL_RS04830;Name=PKHYL_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04830;old_locus_tag=PKHYL_11390
NZ_AP019516.1	Protein Homology	CDS	912792	913382	.	-	0	ID=cds-WP_240366126.1;Parent=gene-PKHYL_RS04830;Dbxref=Genbank:WP_240366126.1;Name=WP_240366126.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013015.2;locus_tag=PKHYL_RS04830;product=hypothetical protein;protein_id=WP_240366126.1;transl_table=11
NZ_AP019516.1	RefSeq	direct_repeat	913546	923540	.	+	.	ID=id-NZ_AP019516.1:913546..923540;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=913613..913643;rpt_unit_seq=tttcaatccacgcacccgtgatgggtgcgaa
NZ_AP019516.1	RefSeq	gene	923798	924088	.	-	.	ID=gene-PKHYL_RS04835;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=PKHYL_RS04835;old_locus_tag=PKHYL_11400
NZ_AP019516.1	Protein Homology	CDS	923798	924088	.	-	0	ID=cds-WP_212564314.1;Parent=gene-PKHYL_RS04835;Dbxref=Genbank:WP_212564314.1;Name=WP_212564314.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673743.1;locus_tag=PKHYL_RS04835;product=CRISPR-associated endonuclease Cas2;protein_id=WP_212564314.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	924127	925158	.	-	.	ID=gene-PKHYL_RS04840;Name=cas1c;gbkey=Gene;gene=cas1c;gene_biotype=protein_coding;locus_tag=PKHYL_RS04840;old_locus_tag=PKHYL_11410
NZ_AP019516.1	Protein Homology	CDS	924127	925158	.	-	0	ID=cds-WP_071002008.1;Parent=gene-PKHYL_RS04840;Dbxref=Genbank:WP_071002008.1;Name=WP_071002008.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;gene=cas1c;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673744.1;locus_tag=PKHYL_RS04840;product=type I-C CRISPR-associated endonuclease Cas1c;protein_id=WP_071002008.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	925269	925421	.	+	.	ID=gene-PKHYL_RS04845;Name=PKHYL_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04845;old_locus_tag=PKHYL_11420
NZ_AP019516.1	Protein Homology	CDS	925269	925421	.	+	0	ID=cds-WP_197496727.1;Parent=gene-PKHYL_RS04845;Dbxref=Genbank:WP_197496727.1;Name=WP_197496727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005401407.1;locus_tag=PKHYL_RS04845;product=hypothetical protein;protein_id=WP_197496727.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	925456	926091	.	-	.	ID=gene-PKHYL_RS04850;Name=cas4;gbkey=Gene;gene=cas4;gene_biotype=protein_coding;locus_tag=PKHYL_RS04850;old_locus_tag=PKHYL_11430
NZ_AP019516.1	Protein Homology	CDS	925456	926091	.	-	0	ID=cds-WP_071002007.1;Parent=gene-PKHYL_RS04850;Dbxref=Genbank:WP_071002007.1;Name=WP_071002007.1;Ontology_term=GO:0043571,GO:0004518;gbkey=CDS;gene=cas4;go_function=nuclease activity|0004518||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673745.1;locus_tag=PKHYL_RS04850;product=CRISPR-associated protein Cas4;protein_id=WP_071002007.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	926179	927069	.	-	.	ID=gene-PKHYL_RS04855;Name=cas7c;gbkey=Gene;gene=cas7c;gene_biotype=pseudogene;locus_tag=PKHYL_RS04855;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	926179	927069	.	-	0	ID=cds-PKHYL_RS04855;Parent=gene-PKHYL_RS04855;Note=internal stop;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas7c;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:NF016963.2;locus_tag=PKHYL_RS04855;product=type I-C CRISPR-associated protein Cas7/Csd2;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	927126	927623	.	-	.	ID=gene-PKHYL_RS17215;Name=PKHYL_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17215;old_locus_tag=PKHYL_11460
NZ_AP019516.1	Protein Homology	CDS	927126	927623	.	-	0	ID=cds-WP_269778312.1;Parent=gene-PKHYL_RS17215;Dbxref=Genbank:WP_269778312.1;Name=WP_269778312.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021243.2;locus_tag=PKHYL_RS17215;product=type I-C CRISPR-associated protein Cas8c/Csd1;protein_id=WP_269778312.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	927602	929161	.	-	.	ID=gene-PKHYL_RS04860;Name=cas8c;gbkey=Gene;gene=cas8c;gene_biotype=protein_coding;locus_tag=PKHYL_RS04860;old_locus_tag=PKHYL_11470
NZ_AP019516.1	Protein Homology	CDS	927602	929161	.	-	0	ID=cds-WP_269778257.1;Parent=gene-PKHYL_RS04860;Dbxref=Genbank:WP_269778257.1;Name=WP_269778257.1;Ontology_term=GO:0043571,GO:0003674,GO:0005575;gbkey=CDS;gene=cas8c;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR01863.1;locus_tag=PKHYL_RS04860;product=type I-C CRISPR-associated protein Cas8c/Csd1;protein_id=WP_269778257.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	929158	929433	.	-	.	ID=gene-PKHYL_RS04865;Name=PKHYL_RS04865;end_range=929433,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04865;old_locus_tag=PKHYL_11480;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	929158	929433	.	-	0	ID=cds-PKHYL_RS04865;Parent=gene-PKHYL_RS04865;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=929433,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021240.2;locus_tag=PKHYL_RS04865;partial=true;product=type I-C CRISPR-associated protein Cas5;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	929481	929786	.	-	.	ID=gene-PKHYL_RS04870;Name=cas5c;gbkey=Gene;gene=cas5c;gene_biotype=protein_coding;locus_tag=PKHYL_RS04870;old_locus_tag=PKHYL_11490
NZ_AP019516.1	Protein Homology	CDS	929481	929786	.	-	0	ID=cds-WP_240366127.1;Parent=gene-PKHYL_RS04870;Dbxref=Genbank:WP_240366127.1;Name=WP_240366127.1;Ontology_term=GO:0043571,GO:0003674,GO:0005575;gbkey=CDS;gene=cas5c;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR01876.1;locus_tag=PKHYL_RS04870;product=type I-C CRISPR-associated protein Cas5c;protein_id=WP_240366127.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	929761	929892	.	-	.	ID=gene-PKHYL_RS04875;Name=cas5;gbkey=Gene;gene=cas5;gene_biotype=protein_coding;locus_tag=PKHYL_RS04875;old_locus_tag=PKHYL_11500
NZ_AP019516.1	Protein Homology	CDS	929761	929892	.	-	0	ID=cds-WP_240366128.1;Parent=gene-PKHYL_RS04875;Dbxref=Genbank:WP_240366128.1;Name=WP_240366128.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas5;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR02593.1;locus_tag=PKHYL_RS04875;product=CRISPR-associated protein Cas5;protein_id=WP_240366128.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	930095	930226	.	-	.	ID=gene-PKHYL_RS17220;Name=PKHYL_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17220
NZ_AP019516.1	GeneMarkS-2+	CDS	930095	930226	.	-	0	ID=cds-WP_269778258.1;Parent=gene-PKHYL_RS17220;Dbxref=Genbank:WP_269778258.1;Name=WP_269778258.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17220;product=hypothetical protein;protein_id=WP_269778258.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	930463	932385	.	-	.	ID=gene-PKHYL_RS04880;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=protein_coding;locus_tag=PKHYL_RS04880;old_locus_tag=PKHYL_11510
NZ_AP019516.1	Protein Homology	CDS	930463	932385	.	-	0	ID=cds-WP_240366129.1;Parent=gene-PKHYL_RS04880;Dbxref=Genbank:WP_240366129.1;Name=WP_240366129.1;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:TIGR01587.1;locus_tag=PKHYL_RS04880;product=CRISPR-associated helicase Cas3';protein_id=WP_240366129.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	932464	932637	.	-	.	ID=gene-PKHYL_RS04885;Name=PKHYL_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04885;old_locus_tag=PKHYL_11520
NZ_AP019516.1	GeneMarkS-2+	CDS	932464	932637	.	-	0	ID=cds-WP_240366130.1;Parent=gene-PKHYL_RS04885;Dbxref=Genbank:WP_240366130.1;Name=WP_240366130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04885;product=hypothetical protein;protein_id=WP_240366130.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	932621	933118	.	-	.	ID=gene-PKHYL_RS04890;Name=PKHYL_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04890;old_locus_tag=PKHYL_11530
NZ_AP019516.1	Protein Homology	CDS	932621	933118	.	-	0	ID=cds-WP_240366131.1;Parent=gene-PKHYL_RS04890;Dbxref=Genbank:WP_240366131.1;Name=WP_240366131.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: protein motif:HMM:NF014069.2;locus_tag=PKHYL_RS04890;product=CRISPR-associated endonuclease Cas3'';protein_id=WP_240366131.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	933606	933896	.	-	.	ID=gene-PKHYL_RS04895;Name=PKHYL_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04895;old_locus_tag=PKHYL_11550
NZ_AP019516.1	Protein Homology	CDS	933606	933896	.	-	0	ID=cds-WP_071002000.1;Parent=gene-PKHYL_RS04895;Dbxref=Genbank:WP_071002000.1;Name=WP_071002000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959966.1;locus_tag=PKHYL_RS04895;product=hypothetical protein;protein_id=WP_071002000.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	933883	935095	.	-	.	ID=gene-PKHYL_RS04900;Name=PKHYL_RS04900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04900;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	933883	935095	.	-	0	ID=cds-PKHYL_RS04900;Parent=gene-PKHYL_RS04900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004756697.1;locus_tag=PKHYL_RS04900;product=site-specific integrase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	935088	935321	.	-	.	ID=gene-PKHYL_RS04905;Name=PKHYL_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04905;old_locus_tag=PKHYL_11600
NZ_AP019516.1	Protein Homology	CDS	935088	935321	.	-	0	ID=cds-WP_240366132.1;Parent=gene-PKHYL_RS04905;Dbxref=Genbank:WP_240366132.1;Name=WP_240366132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442991.1;locus_tag=PKHYL_RS04905;product=hypothetical protein;protein_id=WP_240366132.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	935471	935695	.	+	.	ID=gene-PKHYL_RS04910;Name=PKHYL_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04910;old_locus_tag=PKHYL_11610
NZ_AP019516.1	Protein Homology	CDS	935471	935695	.	+	0	ID=cds-WP_071001997.1;Parent=gene-PKHYL_RS04910;Dbxref=Genbank:WP_071001997.1;Name=WP_071001997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443849.1;locus_tag=PKHYL_RS04910;product=helix-turn-helix transcriptional regulator;protein_id=WP_071001997.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	935937	936013	.	-	.	ID=gene-PKHYL_RS04915;Name=PKHYL_RS04915;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS04915;old_locus_tag=PKHYL_t00190
NZ_AP019516.1	tRNAscan-SE	tRNA	935937	936013	.	-	.	ID=rna-PKHYL_RS04915;Parent=gene-PKHYL_RS04915;anticodon=(pos:complement(935977..935979));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS04915;product=tRNA-Val
NZ_AP019516.1	tRNAscan-SE	exon	935937	936013	.	-	.	ID=exon-PKHYL_RS04915-1;Parent=rna-PKHYL_RS04915;anticodon=(pos:complement(935977..935979));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS04915;product=tRNA-Val
NZ_AP019516.1	RefSeq	gene	936327	937304	.	+	.	ID=gene-PKHYL_RS04920;Name=PKHYL_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04920;old_locus_tag=PKHYL_11620
NZ_AP019516.1	Protein Homology	CDS	936327	937304	.	+	0	ID=cds-WP_093068682.1;Parent=gene-PKHYL_RS04920;Dbxref=Genbank:WP_093068682.1;Name=WP_093068682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199173.1;locus_tag=PKHYL_RS04920;product=glutathione S-transferase family protein;protein_id=WP_093068682.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	937438	938446	.	-	.	ID=gene-PKHYL_RS04925;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=pseudogene;locus_tag=PKHYL_RS04925;old_locus_tag=PKHYL_11630;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	937438	938446	.	-	0	ID=cds-PKHYL_RS04925;Parent=gene-PKHYL_RS04925;Note=frameshifted;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443847.1;locus_tag=PKHYL_RS04925;product=porphobilinogen synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	938664	938924	.	-	.	ID=gene-PKHYL_RS04930;Name=PKHYL_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04930;old_locus_tag=PKHYL_11650
NZ_AP019516.1	GeneMarkS-2+	CDS	938664	938924	.	-	0	ID=cds-WP_240366133.1;Parent=gene-PKHYL_RS04930;Dbxref=Genbank:WP_240366133.1;Name=WP_240366133.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS04930;product=hypothetical protein;protein_id=WP_240366133.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	938900	940084	.	-	.	ID=gene-PKHYL_RS04935;Name=PKHYL_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04935;old_locus_tag=PKHYL_11660
NZ_AP019516.1	Protein Homology	CDS	938900	940084	.	-	0	ID=cds-WP_240366134.1;Parent=gene-PKHYL_RS04935;Dbxref=Genbank:WP_240366134.1;Name=WP_240366134.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01845.1;locus_tag=PKHYL_RS04935;product=efflux transporter outer membrane subunit;protein_id=WP_240366134.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	940171	940359	.	-	.	ID=gene-PKHYL_RS04940;Name=PKHYL_RS04940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04940;partial=true;pseudo=true;start_range=.,940171
NZ_AP019516.1	Protein Homology	CDS	940171	940359	.	-	0	ID=cds-PKHYL_RS04940;Parent=gene-PKHYL_RS04940;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015818.2;locus_tag=PKHYL_RS04940;partial=true;product=TolC family protein;pseudo=true;start_range=.,940171;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	940470	943684	.	-	.	ID=gene-PKHYL_RS04945;Name=PKHYL_RS04945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04945;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	940470	943684	.	-	0	ID=cds-PKHYL_RS04945;Parent=gene-PKHYL_RS04945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199179.1;locus_tag=PKHYL_RS04945;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	943720	945093	.	-	.	ID=gene-PKHYL_RS04950;Name=PKHYL_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04950;old_locus_tag=PKHYL_11700
NZ_AP019516.1	Protein Homology	CDS	943720	945093	.	-	0	ID=cds-WP_071001992.1;Parent=gene-PKHYL_RS04950;Dbxref=Genbank:WP_071001992.1;Name=WP_071001992.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199181.1;locus_tag=PKHYL_RS04950;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_071001992.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	945875	946900	.	-	.	ID=gene-PKHYL_RS04955;Name=PKHYL_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04955;old_locus_tag=PKHYL_11710
NZ_AP019516.1	Protein Homology	CDS	945875	946900	.	-	0	ID=cds-WP_240366135.1;Parent=gene-PKHYL_RS04955;Dbxref=Genbank:WP_240366135.1;Name=WP_240366135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280838.1;locus_tag=PKHYL_RS04955;product=polyprenyl synthetase family protein;protein_id=WP_240366135.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	947469	947780	.	+	.	ID=gene-PKHYL_RS04960;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=PKHYL_RS04960;old_locus_tag=PKHYL_11720
NZ_AP019516.1	Protein Homology	CDS	947469	947780	.	+	0	ID=cds-WP_071001990.1;Parent=gene-PKHYL_RS04960;Dbxref=Genbank:WP_071001990.1;Name=WP_071001990.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280837.1;locus_tag=PKHYL_RS04960;product=50S ribosomal protein L21;protein_id=WP_071001990.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	947872	948129	.	+	.	ID=gene-PKHYL_RS04965;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=PKHYL_RS04965;old_locus_tag=PKHYL_11730
NZ_AP019516.1	Protein Homology	CDS	947872	948129	.	+	0	ID=cds-WP_058025936.1;Parent=gene-PKHYL_RS04965;Dbxref=Genbank:WP_058025936.1;Name=WP_058025936.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199200.1;locus_tag=PKHYL_RS04965;product=50S ribosomal protein L27;protein_id=WP_058025936.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	948599	949285	.	+	.	ID=gene-PKHYL_RS04970;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=PKHYL_RS04970;old_locus_tag=PKHYL_11740
NZ_AP019516.1	Protein Homology	CDS	948599	949285	.	+	0	ID=cds-WP_240366136.1;Parent=gene-PKHYL_RS04970;Dbxref=Genbank:WP_240366136.1;Name=WP_240366136.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514076.1;locus_tag=PKHYL_RS04970;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_240366136.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	949450	950061	.	-	.	ID=gene-PKHYL_RS04975;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=PKHYL_RS04975;old_locus_tag=PKHYL_11750
NZ_AP019516.1	Protein Homology	CDS	949450	950061	.	-	0	ID=cds-WP_240366137.1;Parent=gene-PKHYL_RS04975;Dbxref=Genbank:WP_240366137.1;Name=WP_240366137.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280835.1;locus_tag=PKHYL_RS04975;product=SMC-Scp complex subunit ScpB;protein_id=WP_240366137.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	950128	950966	.	-	.	ID=gene-PKHYL_RS04980;Name=PKHYL_RS04980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS04980;old_locus_tag=PKHYL_11760;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	950128	950966	.	-	0	ID=cds-PKHYL_RS04980;Parent=gene-PKHYL_RS04980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199209.1;locus_tag=PKHYL_RS04980;product=segregation/condensation protein A;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	950972	951574	.	-	.	ID=gene-PKHYL_RS04985;Name=PKHYL_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04985;old_locus_tag=PKHYL_11780
NZ_AP019516.1	Protein Homology	CDS	950972	951574	.	-	0	ID=cds-WP_186474112.1;Parent=gene-PKHYL_RS04985;Dbxref=Genbank:WP_186474112.1;Name=WP_186474112.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013742.2;locus_tag=PKHYL_RS04985;product=class I SAM-dependent methyltransferase;protein_id=WP_186474112.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	951595	952608	.	-	.	ID=gene-PKHYL_RS04990;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=PKHYL_RS04990;old_locus_tag=PKHYL_11790
NZ_AP019516.1	Protein Homology	CDS	951595	952608	.	-	0	ID=cds-WP_240366496.1;Parent=gene-PKHYL_RS04990;Dbxref=Genbank:WP_240366496.1;Name=WP_240366496.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501619.1;locus_tag=PKHYL_RS04990;product=tryptophan--tRNA ligase;protein_id=WP_240366496.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	952775	953866	.	-	.	ID=gene-PKHYL_RS04995;Name=PKHYL_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS04995;old_locus_tag=PKHYL_11800
NZ_AP019516.1	Protein Homology	CDS	952775	953866	.	-	0	ID=cds-WP_240366138.1;Parent=gene-PKHYL_RS04995;Dbxref=Genbank:WP_240366138.1;Name=WP_240366138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280832.1;locus_tag=PKHYL_RS04995;product=lysophospholipid acyltransferase family protein;protein_id=WP_240366138.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	954326	954712	.	-	.	ID=gene-PKHYL_RS05000;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=PKHYL_RS05000;old_locus_tag=PKHYL_11810
NZ_AP019516.1	Protein Homology	CDS	954326	954712	.	-	0	ID=cds-WP_058025929.1;Parent=gene-PKHYL_RS05000;Dbxref=Genbank:WP_058025929.1;Name=WP_058025929.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=PKHYL_RS05000;product=30S ribosomal protein S9;protein_id=WP_058025929.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	954723	955151	.	-	.	ID=gene-PKHYL_RS05005;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=PKHYL_RS05005;old_locus_tag=PKHYL_11820
NZ_AP019516.1	Protein Homology	CDS	954723	955151	.	-	0	ID=cds-WP_058025928.1;Parent=gene-PKHYL_RS05005;Dbxref=Genbank:WP_058025928.1;Name=WP_058025928.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=PKHYL_RS05005;product=50S ribosomal protein L13;protein_id=WP_058025928.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	955403	955624	.	-	.	ID=gene-PKHYL_RS05010;Name=PKHYL_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05010;old_locus_tag=PKHYL_11830
NZ_AP019516.1	GeneMarkS-2+	CDS	955403	955624	.	-	0	ID=cds-WP_240366139.1;Parent=gene-PKHYL_RS05010;Dbxref=Genbank:WP_240366139.1;Name=WP_240366139.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05010;product=hypothetical protein;protein_id=WP_240366139.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	955593	955964	.	-	.	ID=gene-PKHYL_RS05015;Name=PKHYL_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05015;old_locus_tag=PKHYL_11840
NZ_AP019516.1	Protein Homology	CDS	955593	955964	.	-	0	ID=cds-WP_240366140.1;Parent=gene-PKHYL_RS05015;Dbxref=Genbank:WP_240366140.1;Name=WP_240366140.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017026.2;locus_tag=PKHYL_RS05015;product=RsmD family RNA methyltransferase;protein_id=WP_240366140.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	956178	958162	.	-	.	ID=gene-PKHYL_RS05020;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=pseudogene;locus_tag=PKHYL_RS05020;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	956178	958162	.	-	0	ID=cds-PKHYL_RS05020;Parent=gene-PKHYL_RS05020;Note=frameshifted;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280828.1;locus_tag=PKHYL_RS05020;product=penicillin-binding protein 2;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	958657	959990	.	+	.	ID=gene-PKHYL_RS05025;Name=PKHYL_RS05025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05025;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	958657	959990	.	+	0	ID=cds-PKHYL_RS05025;Parent=gene-PKHYL_RS05025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280827.1;locus_tag=PKHYL_RS05025;product=hypothetical protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	960214	960456	.	+	.	ID=gene-PKHYL_RS05030;Name=PKHYL_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05030
NZ_AP019516.1	GeneMarkS-2+	CDS	960214	960456	.	+	0	ID=cds-WP_240366141.1;Parent=gene-PKHYL_RS05030;Dbxref=Genbank:WP_240366141.1;Name=WP_240366141.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05030;product=hypothetical protein;protein_id=WP_240366141.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	960456	960728	.	+	.	ID=gene-PKHYL_RS05035;Name=PKHYL_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05035
NZ_AP019516.1	GeneMarkS-2+	CDS	960456	960728	.	+	0	ID=cds-WP_240366142.1;Parent=gene-PKHYL_RS05035;Dbxref=Genbank:WP_240366142.1;Name=WP_240366142.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05035;product=hypothetical protein;protein_id=WP_240366142.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	960664	961181	.	+	.	ID=gene-PKHYL_RS05040;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=pseudogene;locus_tag=PKHYL_RS05040;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	960664	961181	.	+	0	ID=cds-PKHYL_RS05040;Parent=gene-PKHYL_RS05040;Note=frameshifted;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: protein motif:HMM:NF013725.2;locus_tag=PKHYL_RS05040;product=cytochrome c biogenesis protein CcsA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	961178	961726	.	+	.	ID=gene-PKHYL_RS05045;Name=PKHYL_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05045;old_locus_tag=PKHYL_11910
NZ_AP019516.1	Protein Homology	CDS	961178	961726	.	+	0	ID=cds-WP_240366143.1;Parent=gene-PKHYL_RS05045;Dbxref=Genbank:WP_240366143.1;Name=WP_240366143.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027651.2;locus_tag=PKHYL_RS05045;product=hypothetical protein;protein_id=WP_240366143.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	961971	962309	.	+	.	ID=gene-PKHYL_RS05050;Name=PKHYL_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05050;old_locus_tag=PKHYL_11920
NZ_AP019516.1	Protein Homology	CDS	961971	962309	.	+	0	ID=cds-WP_240366144.1;Parent=gene-PKHYL_RS05050;Dbxref=Genbank:WP_240366144.1;Name=WP_240366144.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027651.2;locus_tag=PKHYL_RS05050;product=hypothetical protein;protein_id=WP_240366144.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	962311	962951	.	+	.	ID=gene-PKHYL_RS05055;Name=PKHYL_RS05055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05055;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	962311	962951	.	+	0	ID=cds-PKHYL_RS05055;Parent=gene-PKHYL_RS05055;Note=frameshifted;Ontology_term=GO:0017004,GO:0015036,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513682.1;locus_tag=PKHYL_RS05055;product=DsbE family thiol:disulfide interchange protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	963017	963357	.	+	.	ID=gene-PKHYL_RS05060;Name=PKHYL_RS05060;end_range=963357,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05060;old_locus_tag=PKHYL_11940;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	963017	963357	.	+	0	ID=cds-PKHYL_RS05060;Parent=gene-PKHYL_RS05060;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=963357,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280824.1;locus_tag=PKHYL_RS05060;partial=true;product=cytochrome c-type biogenesis protein CcmH;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	963504	963737	.	+	.	ID=gene-PKHYL_RS05065;Name=PKHYL_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05065;old_locus_tag=PKHYL_11950
NZ_AP019516.1	GeneMarkS-2+	CDS	963504	963737	.	+	0	ID=cds-WP_240366145.1;Parent=gene-PKHYL_RS05065;Dbxref=Genbank:WP_240366145.1;Name=WP_240366145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05065;product=hypothetical protein;protein_id=WP_240366145.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	963969	964436	.	+	.	ID=gene-PKHYL_RS05070;Name=PKHYL_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05070;old_locus_tag=PKHYL_11960
NZ_AP019516.1	GeneMarkS-2+	CDS	963969	964436	.	+	0	ID=cds-WP_240366146.1;Parent=gene-PKHYL_RS05070;Dbxref=Genbank:WP_240366146.1;Name=WP_240366146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05070;product=hypothetical protein;protein_id=WP_240366146.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	964433	964780	.	+	.	ID=gene-PKHYL_RS05075;Name=PKHYL_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05075;old_locus_tag=PKHYL_11970
NZ_AP019516.1	GeneMarkS-2+	CDS	964433	964780	.	+	0	ID=cds-WP_240366147.1;Parent=gene-PKHYL_RS05075;Dbxref=Genbank:WP_240366147.1;Name=WP_240366147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05075;product=hypothetical protein;protein_id=WP_240366147.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	964999	965653	.	+	.	ID=gene-PKHYL_RS05080;Name=adk;gbkey=Gene;gene=adk;gene_biotype=pseudogene;locus_tag=PKHYL_RS05080;old_locus_tag=PKHYL_11980;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	964999	965653	.	+	0	ID=cds-PKHYL_RS05080;Parent=gene-PKHYL_RS05080;Note=frameshifted;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199237.1;locus_tag=PKHYL_RS05080;product=adenylate kinase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	965801	966793	.	+	.	ID=gene-PKHYL_RS05085;Name=PKHYL_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05085;old_locus_tag=PKHYL_11990
NZ_AP019516.1	Protein Homology	CDS	965801	966793	.	+	0	ID=cds-WP_240365287.1-4;Parent=gene-PKHYL_RS05085;Dbxref=Genbank:WP_240365287.1;Name=WP_240365287.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=PKHYL_RS05085;product=IS30 family transposase;protein_id=WP_240365287.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	966956	967408	.	-	.	ID=gene-PKHYL_RS05090;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=PKHYL_RS05090;old_locus_tag=PKHYL_12000
NZ_AP019516.1	Protein Homology	CDS	966956	967408	.	-	0	ID=cds-WP_058025921.1;Parent=gene-PKHYL_RS05090;Dbxref=Genbank:WP_058025921.1;Name=WP_058025921.1;Ontology_term=GO:0015031,GO:0051262,GO:0051082;gbkey=CDS;gene=secB;go_function=unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,protein tetramerization|0051262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906530.1;locus_tag=PKHYL_RS05090;product=protein-export chaperone SecB;protein_id=WP_058025921.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	967588	967851	.	-	.	ID=gene-PKHYL_RS05095;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=PKHYL_RS05095;old_locus_tag=PKHYL_12010
NZ_AP019516.1	Protein Homology	CDS	967588	967851	.	-	0	ID=cds-WP_058025920.1;Parent=gene-PKHYL_RS05095;Dbxref=Genbank:WP_058025920.1;Name=WP_058025920.1;Ontology_term=GO:0015036;gbkey=CDS;gene=grxC;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280820.1;locus_tag=PKHYL_RS05095;product=glutaredoxin 3;protein_id=WP_058025920.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	968150	968606	.	-	.	ID=gene-PKHYL_RS05100;Name=PKHYL_RS05100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05100;old_locus_tag=PKHYL_12020;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	968150	968606	.	-	0	ID=cds-PKHYL_RS05100;Parent=gene-PKHYL_RS05100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199245.1;locus_tag=PKHYL_RS05100;product=rhodanese-like domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	968768	969871	.	-	.	ID=gene-PKHYL_RS05105;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=PKHYL_RS05105;old_locus_tag=PKHYL_12030
NZ_AP019516.1	Protein Homology	CDS	968768	969871	.	-	0	ID=cds-WP_240366148.1;Parent=gene-PKHYL_RS05105;Dbxref=Genbank:WP_240366148.1;Name=WP_240366148.1;Ontology_term=GO:0006412,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199247.1;locus_tag=PKHYL_RS05105;product=ribosome small subunit-dependent GTPase A;protein_id=WP_240366148.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	970117	970704	.	+	.	ID=gene-PKHYL_RS05110;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=PKHYL_RS05110;old_locus_tag=PKHYL_12040
NZ_AP019516.1	Protein Homology	CDS	970117	970704	.	+	0	ID=cds-WP_240366149.1;Parent=gene-PKHYL_RS05110;Dbxref=Genbank:WP_240366149.1;Name=WP_240366149.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280817.1;locus_tag=PKHYL_RS05110;product=oligoribonuclease;protein_id=WP_240366149.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	970822	971708	.	-	.	ID=gene-PKHYL_RS05115;Name=PKHYL_RS05115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05115;old_locus_tag=PKHYL_12050;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	970822	971708	.	-	0	ID=cds-PKHYL_RS05115;Parent=gene-PKHYL_RS05115;Note=frameshifted;Ontology_term=GO:0009245,GO:0016462;gbkey=CDS;go_function=pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279978.1;locus_tag=PKHYL_RS05115;product=UDP-2%2C3-diacylglucosamine diphosphatase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	971839	972345	.	-	.	ID=gene-PKHYL_RS05120;Name=PKHYL_RS05120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05120;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	971839	972345	.	-	0	ID=cds-PKHYL_RS05120;Parent=gene-PKHYL_RS05120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501793.1;locus_tag=PKHYL_RS05120;product=peptidylprolyl isomerase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	972669	974409	.	+	.	ID=gene-PKHYL_RS05125;Name=PKHYL_RS05125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05125;old_locus_tag=PKHYL_12090;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	972669	974409	.	+	0	ID=cds-PKHYL_RS05125;Parent=gene-PKHYL_RS05125;Note=frameshifted;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279980.1;locus_tag=PKHYL_RS05125;product=glutamine--tRNA ligase/YqeY domain fusion protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	974788	975425	.	+	.	ID=gene-PKHYL_RS05130;Name=PKHYL_RS05130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05130;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	974788	975425	.	+	0	ID=cds-PKHYL_RS05130;Parent=gene-PKHYL_RS05130;Note=frameshifted;Ontology_term=GO:0098869,GO:0008379,GO:0051920;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA,peroxiredoxin activity|0051920||IEA;go_process=cellular oxidant detoxification|0098869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513017.1;locus_tag=PKHYL_RS05130;product=peroxiredoxin;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	975705	976310	.	+	.	ID=gene-PKHYL_RS05135;Name=PKHYL_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05135;old_locus_tag=PKHYL_12120
NZ_AP019516.1	Protein Homology	CDS	975705	976310	.	+	0	ID=cds-WP_240366150.1;Parent=gene-PKHYL_RS05135;Dbxref=Genbank:WP_240366150.1;Name=WP_240366150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199257.1;locus_tag=PKHYL_RS05135;product=glutathione S-transferase family protein;protein_id=WP_240366150.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	976644	977582	.	+	.	ID=gene-PKHYL_RS05140;Name=PKHYL_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05140;old_locus_tag=PKHYL_12130
NZ_AP019516.1	Protein Homology	CDS	976644	977582	.	+	0	ID=cds-WP_071001969.1;Parent=gene-PKHYL_RS05140;Dbxref=Genbank:WP_071001969.1;Name=WP_071001969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513020.1;locus_tag=PKHYL_RS05140;product=META domain-containing protein;protein_id=WP_071001969.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	977725	978309	.	-	.	ID=gene-PKHYL_RS05145;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=PKHYL_RS05145;old_locus_tag=PKHYL_12140
NZ_AP019516.1	Protein Homology	CDS	977725	978309	.	-	0	ID=cds-WP_071001968.1;Parent=gene-PKHYL_RS05145;Dbxref=Genbank:WP_071001968.1;Name=WP_071001968.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513021.1;locus_tag=PKHYL_RS05145;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_071001968.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	978463	979083	.	+	.	ID=gene-PKHYL_RS05150;Name=PKHYL_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05150;old_locus_tag=PKHYL_12150
NZ_AP019516.1	Protein Homology	CDS	978463	979083	.	+	0	ID=cds-WP_071001967.1;Parent=gene-PKHYL_RS05150;Dbxref=Genbank:WP_071001967.1;Name=WP_071001967.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003663175.1;locus_tag=PKHYL_RS05150;product=FxsA family protein;protein_id=WP_071001967.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	979197	979393	.	-	.	ID=gene-PKHYL_RS05155;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=PKHYL_RS05155
NZ_AP019516.1	cmsearch	ncRNA	979197	979393	.	-	.	ID=rna-PKHYL_RS05155;Parent=gene-PKHYL_RS05155;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS05155;product=6S RNA
NZ_AP019516.1	cmsearch	exon	979197	979393	.	-	.	ID=exon-PKHYL_RS05155-1;Parent=rna-PKHYL_RS05155;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS05155;product=6S RNA
NZ_AP019516.1	RefSeq	gene	979628	981292	.	+	.	ID=gene-PKHYL_RS05160;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=PKHYL_RS05160;old_locus_tag=PKHYL_12160
NZ_AP019516.1	Protein Homology	CDS	979628	981292	.	+	0	ID=cds-WP_083328846.1;Parent=gene-PKHYL_RS05160;Dbxref=Genbank:WP_083328846.1;Name=WP_083328846.1;Ontology_term=GO:0006096,GO:0046537;gbkey=CDS;gene=gpmI;go_function=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase activity|0046537||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199268.1;locus_tag=PKHYL_RS05160;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_083328846.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	981555	982997	.	+	.	ID=gene-PKHYL_RS05165;Name=PKHYL_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05165;old_locus_tag=PKHYL_12170
NZ_AP019516.1	Protein Homology	CDS	981555	982997	.	+	0	ID=cds-WP_240366151.1;Parent=gene-PKHYL_RS05165;Dbxref=Genbank:WP_240366151.1;Name=WP_240366151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513024.1;locus_tag=PKHYL_RS05165;product=S41 family peptidase;protein_id=WP_240366151.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	983080	983241	.	-	.	ID=gene-PKHYL_RS05170;Name=PKHYL_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05170;old_locus_tag=PKHYL_12180
NZ_AP019516.1	GeneMarkS-2+	CDS	983080	983241	.	-	0	ID=cds-WP_240366152.1;Parent=gene-PKHYL_RS05170;Dbxref=Genbank:WP_240366152.1;Name=WP_240366152.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05170;product=helix-turn-helix domain-containing protein;protein_id=WP_240366152.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	983205	983795	.	-	.	ID=gene-PKHYL_RS17225;Name=PKHYL_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17225;old_locus_tag=PKHYL_12190
NZ_AP019516.1	GeneMarkS-2+	CDS	983205	983795	.	-	0	ID=cds-WP_269778259.1;Parent=gene-PKHYL_RS17225;Dbxref=Genbank:WP_269778259.1;Name=WP_269778259.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17225;product=hypothetical protein;protein_id=WP_269778259.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	983798	984097	.	-	.	ID=gene-PKHYL_RS17230;Name=PKHYL_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17230;old_locus_tag=PKHYL_12200
NZ_AP019516.1	Protein Homology	CDS	983798	984097	.	-	0	ID=cds-WP_269778260.1;Parent=gene-PKHYL_RS17230;Dbxref=Genbank:WP_269778260.1;Name=WP_269778260.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012385.2;locus_tag=PKHYL_RS17230;product=sigma 54-interacting transcriptional regulator;protein_id=WP_269778260.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	984061	984372	.	-	.	ID=gene-PKHYL_RS17235;Name=PKHYL_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17235
NZ_AP019516.1	Protein Homology	CDS	984061	984372	.	-	0	ID=cds-WP_269778261.1;Parent=gene-PKHYL_RS17235;Dbxref=Genbank:WP_269778261.1;Name=WP_269778261.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012385.2;locus_tag=PKHYL_RS17235;product=sigma 54-interacting transcriptional regulator;protein_id=WP_269778261.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	984380	984784	.	-	.	ID=gene-PKHYL_RS17240;Name=PKHYL_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17240;old_locus_tag=PKHYL_12210
NZ_AP019516.1	Protein Homology	CDS	984380	984784	.	-	0	ID=cds-WP_269778262.1;Parent=gene-PKHYL_RS17240;Dbxref=Genbank:WP_269778262.1;Name=WP_269778262.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=PKHYL_RS17240;product=response regulator;protein_id=WP_269778262.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	984913	985188	.	-	.	ID=gene-PKHYL_RS05180;Name=PKHYL_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05180;old_locus_tag=PKHYL_12220
NZ_AP019516.1	Protein Homology	CDS	984913	985188	.	-	0	ID=cds-WP_240366153.1;Parent=gene-PKHYL_RS05180;Dbxref=Genbank:WP_240366153.1;Name=WP_240366153.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=PKHYL_RS05180;product=ATP-binding protein;protein_id=WP_240366153.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	985193	985783	.	-	.	ID=gene-PKHYL_RS05185;Name=PKHYL_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05185;old_locus_tag=PKHYL_12230
NZ_AP019516.1	Protein Homology	CDS	985193	985783	.	-	0	ID=cds-WP_240366154.1;Parent=gene-PKHYL_RS05185;Dbxref=Genbank:WP_240366154.1;Name=WP_240366154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012722.2;locus_tag=PKHYL_RS05185;product=hypothetical protein;protein_id=WP_240366154.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	985758	986438	.	-	.	ID=gene-PKHYL_RS05190;Name=PKHYL_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05190;old_locus_tag=PKHYL_12240
NZ_AP019516.1	GeneMarkS-2+	CDS	985758	986438	.	-	0	ID=cds-WP_240366155.1;Parent=gene-PKHYL_RS05190;Dbxref=Genbank:WP_240366155.1;Name=WP_240366155.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05190;product=hypothetical protein;protein_id=WP_240366155.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	986498	986707	.	-	.	ID=gene-PKHYL_RS05195;Name=PKHYL_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05195
NZ_AP019516.1	GeneMarkS-2+	CDS	986498	986707	.	-	0	ID=cds-WP_240366156.1;Parent=gene-PKHYL_RS05195;Dbxref=Genbank:WP_240366156.1;Name=WP_240366156.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05195;product=hypothetical protein;protein_id=WP_240366156.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	986744	987378	.	-	.	ID=gene-PKHYL_RS05200;Name=PKHYL_RS05200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05200;old_locus_tag=PKHYL_12250;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	986744	987378	.	-	0	ID=cds-PKHYL_RS05200;Parent=gene-PKHYL_RS05200;Note=frameshifted;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019457005.1;locus_tag=PKHYL_RS05200;product=response regulator;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	987812	988888	.	+	.	ID=gene-PKHYL_RS05205;Name=PKHYL_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05205;old_locus_tag=PKHYL_12260
NZ_AP019516.1	Protein Homology	CDS	987812	988888	.	+	0	ID=cds-WP_071001964.1;Parent=gene-PKHYL_RS05205;Dbxref=Genbank:WP_071001964.1;Name=WP_071001964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513028.1;locus_tag=PKHYL_RS05205;product=serine hydrolase;protein_id=WP_071001964.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	988976	989647	.	+	.	ID=gene-PKHYL_RS05210;Name=PKHYL_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05210;old_locus_tag=PKHYL_12270
NZ_AP019516.1	Protein Homology	CDS	988976	989647	.	+	0	ID=cds-WP_240366157.1;Parent=gene-PKHYL_RS05210;Dbxref=Genbank:WP_240366157.1;Name=WP_240366157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199284.1;locus_tag=PKHYL_RS05210;product=thiamine phosphate synthase;protein_id=WP_240366157.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	989674	990002	.	-	.	ID=gene-PKHYL_RS05215;Name=PKHYL_RS05215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05215;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	989674	990002	.	-	0	ID=cds-PKHYL_RS05215;Parent=gene-PKHYL_RS05215;Note=frameshifted;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513030.1;locus_tag=PKHYL_RS05215;product=TraR/DksA C4-type zinc finger protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	990445	991659	.	+	.	ID=gene-PKHYL_RS05220;Name=PKHYL_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05220;old_locus_tag=PKHYL_12300
NZ_AP019516.1	Protein Homology	CDS	990445	991659	.	+	0	ID=cds-WP_071001962.1;Parent=gene-PKHYL_RS05220;Dbxref=Genbank:WP_071001962.1;Name=WP_071001962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513031.1;locus_tag=PKHYL_RS05220;product=phosphoglycerate kinase;protein_id=WP_071001962.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	991914	992300	.	+	.	ID=gene-PKHYL_RS05225;Name=PKHYL_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05225;old_locus_tag=PKHYL_12310
NZ_AP019516.1	Protein Homology	CDS	991914	992300	.	+	0	ID=cds-WP_071001961.1;Parent=gene-PKHYL_RS05225;Dbxref=Genbank:WP_071001961.1;Name=WP_071001961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279993.1;locus_tag=PKHYL_RS05225;product=hypothetical protein;protein_id=WP_071001961.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	992679	993740	.	+	.	ID=gene-PKHYL_RS05230;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=PKHYL_RS05230;old_locus_tag=PKHYL_12320
NZ_AP019516.1	Protein Homology	CDS	992679	993740	.	+	0	ID=cds-WP_240366158.1;Parent=gene-PKHYL_RS05230;Dbxref=Genbank:WP_240366158.1;Name=WP_240366158.1;Note=catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle%2C glycolysis%2C and/or gluconeogenesis;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;gene=fba;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513033.1;locus_tag=PKHYL_RS05230;product=fructose-bisphosphate aldolase class II;protein_id=WP_240366158.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	993817	994436	.	+	.	ID=gene-PKHYL_RS05235;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=pseudogene;locus_tag=PKHYL_RS05235;old_locus_tag=PKHYL_12330;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	993817	994436	.	+	0	ID=cds-PKHYL_RS05235;Parent=gene-PKHYL_RS05235;Note=frameshifted;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658018.1;locus_tag=PKHYL_RS05235;product=Holliday junction branch migration protein RuvA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	994616	995595	.	+	.	ID=gene-PKHYL_RS05240;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=pseudogene;locus_tag=PKHYL_RS05240;old_locus_tag=PKHYL_12350;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	994616	995595	.	+	0	ID=cds-PKHYL_RS05240;Parent=gene-PKHYL_RS05240;Note=frameshifted;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199300.1;locus_tag=PKHYL_RS05240;product=Holliday junction branch migration DNA helicase RuvB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	995665	996300	.	-	.	ID=gene-PKHYL_RS05245;Name=PKHYL_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05245;old_locus_tag=PKHYL_12360
NZ_AP019516.1	Protein Homology	CDS	995665	996300	.	-	0	ID=cds-WP_083328844.1;Parent=gene-PKHYL_RS05245;Dbxref=Genbank:WP_083328844.1;Name=WP_083328844.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF013714.2;locus_tag=PKHYL_RS05245;product=FAD-binding protein;protein_id=WP_083328844.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	996394	998053	.	-	.	ID=gene-PKHYL_RS05250;Name=PKHYL_RS05250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05250;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	996394	998053	.	-	0	ID=cds-PKHYL_RS05250;Parent=gene-PKHYL_RS05250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199302.1;locus_tag=PKHYL_RS05250;product=AarF/UbiB family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	998172	998876	.	-	.	ID=gene-PKHYL_RS05255;Name=PKHYL_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05255;old_locus_tag=PKHYL_12400
NZ_AP019516.1	Protein Homology	CDS	998172	998876	.	-	0	ID=cds-WP_240366159.1;Parent=gene-PKHYL_RS05255;Dbxref=Genbank:WP_240366159.1;Name=WP_240366159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199305.1;locus_tag=PKHYL_RS05255;product=hypothetical protein;protein_id=WP_240366159.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	998957	1000005	.	-	.	ID=gene-PKHYL_RS05260;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=pseudogene;locus_tag=PKHYL_RS05260;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	998957	1000005	.	-	0	ID=cds-PKHYL_RS05260;Parent=gene-PKHYL_RS05260;Note=frameshifted;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513038.1;locus_tag=PKHYL_RS05260;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1000090	1000793	.	-	.	ID=gene-PKHYL_RS05265;Name=PKHYL_RS05265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05265;old_locus_tag=PKHYL_12430;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1000090	1000793	.	-	0	ID=cds-PKHYL_RS05265;Parent=gene-PKHYL_RS05265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199308.1;locus_tag=PKHYL_RS05265;product=hypothetical protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1001131	1001403	.	+	.	ID=gene-PKHYL_RS05270;Name=PKHYL_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05270
NZ_AP019516.1	GeneMarkS-2+	CDS	1001131	1001403	.	+	0	ID=cds-WP_240366160.1;Parent=gene-PKHYL_RS05270;Dbxref=Genbank:WP_240366160.1;Name=WP_240366160.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05270;product=hypothetical protein;protein_id=WP_240366160.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1001364	1002086	.	+	.	ID=gene-PKHYL_RS05275;Name=PKHYL_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05275;old_locus_tag=PKHYL_12440
NZ_AP019516.1	Protein Homology	CDS	1001364	1002086	.	+	0	ID=cds-WP_240366161.1;Parent=gene-PKHYL_RS05275;Dbxref=Genbank:WP_240366161.1;Name=WP_240366161.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015909.2;locus_tag=PKHYL_RS05275;product=hypothetical protein;protein_id=WP_240366161.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1002101	1002817	.	+	.	ID=gene-PKHYL_RS05280;Name=PKHYL_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05280;old_locus_tag=PKHYL_12450
NZ_AP019516.1	Protein Homology	CDS	1002101	1002817	.	+	0	ID=cds-WP_240366162.1;Parent=gene-PKHYL_RS05280;Dbxref=Genbank:WP_240366162.1;Name=WP_240366162.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015909.2;locus_tag=PKHYL_RS05280;product=hypothetical protein;protein_id=WP_240366162.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1003635	1005078	.	+	.	ID=gene-PKHYL_RS05285;Name=PKHYL_RS05285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05285;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1003635	1005078	.	+	0	ID=cds-PKHYL_RS05285;Parent=gene-PKHYL_RS05285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013543.2;locus_tag=PKHYL_RS05285;product=inorganic phosphate transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1005163	1006805	.	-	.	ID=gene-PKHYL_RS05290;Name=PKHYL_RS05290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05290;old_locus_tag=PKHYL_12490;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1005163	1006805	.	-	0	ID=cds-PKHYL_RS05290;Parent=gene-PKHYL_RS05290;Note=frameshifted;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672770.1;locus_tag=PKHYL_RS05290;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1007207	1007632	.	+	.	ID=gene-PKHYL_RS05300;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=PKHYL_RS05300;old_locus_tag=PKHYL_12500
NZ_AP019516.1	Protein Homology	CDS	1007207	1007632	.	+	0	ID=cds-WP_058025889.1;Parent=gene-PKHYL_RS05300;Dbxref=Genbank:WP_058025889.1;Name=WP_058025889.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442960.1;locus_tag=PKHYL_RS05300;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_058025889.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1007765	1008250	.	+	.	ID=gene-PKHYL_RS05305;Name=PKHYL_RS05305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05305;old_locus_tag=PKHYL_12510;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1007765	1008250	.	+	0	ID=cds-PKHYL_RS05305;Parent=gene-PKHYL_RS05305;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005271174.1;locus_tag=PKHYL_RS05305;product=glutathione peroxidase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1008578	1008653	.	+	.	ID=gene-PKHYL_RS05310;Name=PKHYL_RS05310;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS05310;old_locus_tag=PKHYL_t00200
NZ_AP019516.1	tRNAscan-SE	tRNA	1008578	1008653	.	+	.	ID=rna-PKHYL_RS05310;Parent=gene-PKHYL_RS05310;anticodon=(pos:1008611..1008613);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS05310;product=tRNA-Val
NZ_AP019516.1	tRNAscan-SE	exon	1008578	1008653	.	+	.	ID=exon-PKHYL_RS05310-1;Parent=rna-PKHYL_RS05310;anticodon=(pos:1008611..1008613);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS05310;product=tRNA-Val
NZ_AP019516.1	RefSeq	gene	1008706	1008782	.	+	.	ID=gene-PKHYL_RS05315;Name=PKHYL_RS05315;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS05315;old_locus_tag=PKHYL_t00210
NZ_AP019516.1	tRNAscan-SE	tRNA	1008706	1008782	.	+	.	ID=rna-PKHYL_RS05315;Parent=gene-PKHYL_RS05315;anticodon=(pos:1008740..1008742);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS05315;product=tRNA-Asp
NZ_AP019516.1	tRNAscan-SE	exon	1008706	1008782	.	+	.	ID=exon-PKHYL_RS05315-1;Parent=rna-PKHYL_RS05315;anticodon=(pos:1008740..1008742);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS05315;product=tRNA-Asp
NZ_AP019516.1	RefSeq	gene	1009619	1009978	.	+	.	ID=gene-PKHYL_RS05320;Name=PKHYL_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05320;old_locus_tag=PKHYL_12530
NZ_AP019516.1	Protein Homology	CDS	1009619	1009978	.	+	0	ID=cds-WP_240366163.1;Parent=gene-PKHYL_RS05320;Dbxref=Genbank:WP_240366163.1;Name=WP_240366163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280227.1;locus_tag=PKHYL_RS05320;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_240366163.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1010027	1010434	.	+	.	ID=gene-PKHYL_RS05325;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=PKHYL_RS05325;old_locus_tag=PKHYL_12540
NZ_AP019516.1	Protein Homology	CDS	1010027	1010434	.	+	0	ID=cds-WP_071001948.1;Parent=gene-PKHYL_RS05325;Dbxref=Genbank:WP_071001948.1;Name=WP_071001948.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443623.1;locus_tag=PKHYL_RS05325;product=arsenate reductase (glutaredoxin);protein_id=WP_071001948.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1010421	1011195	.	+	.	ID=gene-PKHYL_RS05330;Name=arsH;gbkey=Gene;gene=arsH;gene_biotype=pseudogene;locus_tag=PKHYL_RS05330;old_locus_tag=PKHYL_12550;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1010421	1011195	.	+	0	ID=cds-PKHYL_RS05330;Parent=gene-PKHYL_RS05330;Note=frameshifted;Ontology_term=GO:0003674;gbkey=CDS;gene=arsH;go_function=molecular_function|0003674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020203140.1;locus_tag=PKHYL_RS05330;product=arsenical resistance protein ArsH;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1011264	1012571	.	+	.	ID=gene-PKHYL_RS05335;Name=PKHYL_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05335;old_locus_tag=PKHYL_12560
NZ_AP019516.1	Protein Homology	CDS	1011264	1012571	.	+	0	ID=cds-WP_240366164.1;Parent=gene-PKHYL_RS05335;Dbxref=Genbank:WP_240366164.1;Name=WP_240366164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960395.1;locus_tag=PKHYL_RS05335;product=arsenic transporter;protein_id=WP_240366164.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1012702	1012777	.	-	.	ID=gene-PKHYL_RS05340;Name=PKHYL_RS05340;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS05340;old_locus_tag=PKHYL_t00220
NZ_AP019516.1	tRNAscan-SE	tRNA	1012702	1012777	.	-	.	ID=rna-PKHYL_RS05340;Parent=gene-PKHYL_RS05340;anticodon=(pos:complement(1012742..1012744));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS05340;product=tRNA-Asn
NZ_AP019516.1	tRNAscan-SE	exon	1012702	1012777	.	-	.	ID=exon-PKHYL_RS05340-1;Parent=rna-PKHYL_RS05340;anticodon=(pos:complement(1012742..1012744));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS05340;product=tRNA-Asn
NZ_AP019516.1	RefSeq	gene	1013034	1014236	.	-	.	ID=gene-PKHYL_RS05345;Name=PKHYL_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05345;old_locus_tag=PKHYL_12570
NZ_AP019516.1	Protein Homology	CDS	1013034	1014236	.	-	0	ID=cds-WP_240366165.1;Parent=gene-PKHYL_RS05345;Dbxref=Genbank:WP_240366165.1;Name=WP_240366165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200026.1;locus_tag=PKHYL_RS05345;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_240366165.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1014758	1015021	.	+	.	ID=gene-PKHYL_RS17245;Name=PKHYL_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17245;old_locus_tag=PKHYL_12580
NZ_AP019516.1	Protein Homology	CDS	1014758	1015021	.	+	0	ID=cds-WP_269778263.1;Parent=gene-PKHYL_RS17245;Dbxref=Genbank:WP_269778263.1;Name=WP_269778263.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013530.2;locus_tag=PKHYL_RS17245;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_269778263.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1015006	1015494	.	+	.	ID=gene-PKHYL_RS05350;Name=PKHYL_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05350;old_locus_tag=PKHYL_12590
NZ_AP019516.1	Protein Homology	CDS	1015006	1015494	.	+	0	ID=cds-WP_269778264.1;Parent=gene-PKHYL_RS05350;Dbxref=Genbank:WP_269778264.1;Name=WP_269778264.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=PKHYL_RS05350;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_269778264.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1015555	1015809	.	+	.	ID=gene-PKHYL_RS05355;Name=PKHYL_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05355;old_locus_tag=PKHYL_12600
NZ_AP019516.1	Protein Homology	CDS	1015555	1015809	.	+	0	ID=cds-WP_240366166.1;Parent=gene-PKHYL_RS05355;Dbxref=Genbank:WP_240366166.1;Name=WP_240366166.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF019604.2;locus_tag=PKHYL_RS05355;product=FAD-dependent oxidoreductase;protein_id=WP_240366166.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1015914	1016270	.	+	.	ID=gene-PKHYL_RS05360;Name=PKHYL_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05360;old_locus_tag=PKHYL_12610
NZ_AP019516.1	GeneMarkS-2+	CDS	1015914	1016270	.	+	0	ID=cds-WP_240366167.1;Parent=gene-PKHYL_RS05360;Dbxref=Genbank:WP_240366167.1;Name=WP_240366167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05360;product=hypothetical protein;protein_id=WP_240366167.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1016224	1017024	.	+	.	ID=gene-PKHYL_RS05365;Name=PKHYL_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05365;old_locus_tag=PKHYL_12620
NZ_AP019516.1	Protein Homology	CDS	1016224	1017024	.	+	0	ID=cds-WP_240366168.1;Parent=gene-PKHYL_RS05365;Dbxref=Genbank:WP_240366168.1;Name=WP_240366168.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF013739.2;locus_tag=PKHYL_RS05365;product=FAD-dependent oxidoreductase;protein_id=WP_240366168.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1017015	1017260	.	+	.	ID=gene-PKHYL_RS05370;Name=PKHYL_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05370;old_locus_tag=PKHYL_12630
NZ_AP019516.1	GeneMarkS-2+	CDS	1017015	1017260	.	+	0	ID=cds-WP_240366169.1;Parent=gene-PKHYL_RS05370;Dbxref=Genbank:WP_240366169.1;Name=WP_240366169.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05370;product=hypothetical protein;protein_id=WP_240366169.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1017321	1018409	.	+	.	ID=gene-PKHYL_RS05375;Name=PKHYL_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05375;old_locus_tag=PKHYL_12640
NZ_AP019516.1	Protein Homology	CDS	1017321	1018409	.	+	0	ID=cds-WP_212564348.1;Parent=gene-PKHYL_RS05375;Dbxref=Genbank:WP_212564348.1;Name=WP_212564348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280021.1;locus_tag=PKHYL_RS05375;product=DUF1365 family protein;protein_id=WP_212564348.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1018492	1019829	.	+	.	ID=gene-PKHYL_RS05380;Name=PKHYL_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05380;old_locus_tag=PKHYL_12650
NZ_AP019516.1	Protein Homology	CDS	1018492	1019829	.	+	0	ID=cds-WP_240366170.1;Parent=gene-PKHYL_RS05380;Dbxref=Genbank:WP_240366170.1;Name=WP_240366170.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014414.2;locus_tag=PKHYL_RS05380;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=WP_240366170.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1019783	1019947	.	+	.	ID=gene-PKHYL_RS05385;Name=PKHYL_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05385;old_locus_tag=PKHYL_12660
NZ_AP019516.1	GeneMarkS-2+	CDS	1019783	1019947	.	+	0	ID=cds-WP_240366171.1;Parent=gene-PKHYL_RS05385;Dbxref=Genbank:WP_240366171.1;Name=WP_240366171.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05385;product=hypothetical protein;protein_id=WP_240366171.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1020063	1021235	.	-	.	ID=gene-PKHYL_RS05390;Name=PKHYL_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05390;old_locus_tag=PKHYL_12670
NZ_AP019516.1	Protein Homology	CDS	1020063	1021235	.	-	0	ID=cds-WP_071001942.1;Parent=gene-PKHYL_RS05390;Dbxref=Genbank:WP_071001942.1;Name=WP_071001942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017062689.1;locus_tag=PKHYL_RS05390;product=MFS transporter;protein_id=WP_071001942.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1021340	1022230	.	+	.	ID=gene-PKHYL_RS05395;Name=PKHYL_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05395;old_locus_tag=PKHYL_12680
NZ_AP019516.1	Protein Homology	CDS	1021340	1022230	.	+	0	ID=cds-WP_228724559.1;Parent=gene-PKHYL_RS05395;Dbxref=Genbank:WP_228724559.1;Name=WP_228724559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017033942.1;locus_tag=PKHYL_RS05395;product=LysR family transcriptional regulator;protein_id=WP_228724559.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1022271	1022681	.	+	.	ID=gene-PKHYL_RS05400;Name=PKHYL_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05400;old_locus_tag=PKHYL_12690
NZ_AP019516.1	Protein Homology	CDS	1022271	1022681	.	+	0	ID=cds-WP_071001940.1;Parent=gene-PKHYL_RS05400;Dbxref=Genbank:WP_071001940.1;Name=WP_071001940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513081.1;locus_tag=PKHYL_RS05400;product=DUF2177 family protein;protein_id=WP_071001940.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1022836	1023386	.	+	.	ID=gene-PKHYL_RS05405;Name=PKHYL_RS05405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05405;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1022836	1023386	.	+	0	ID=cds-PKHYL_RS05405;Parent=gene-PKHYL_RS05405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200010.1;locus_tag=PKHYL_RS05405;product=acyl-CoA thioesterase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1023558	1023917	.	+	.	ID=gene-PKHYL_RS17250;Name=PKHYL_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17250;old_locus_tag=PKHYL_12710
NZ_AP019516.1	Protein Homology	CDS	1023558	1023917	.	+	0	ID=cds-WP_269778265.1;Parent=gene-PKHYL_RS17250;Dbxref=Genbank:WP_269778265.1;Name=WP_269778265.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013695.2;locus_tag=PKHYL_RS17250;product=cation transporter;protein_id=WP_269778265.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1023848	1024645	.	+	.	ID=gene-PKHYL_RS05410;Name=PKHYL_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05410;old_locus_tag=PKHYL_12720
NZ_AP019516.1	Protein Homology	CDS	1023848	1024645	.	+	0	ID=cds-WP_269778266.1;Parent=gene-PKHYL_RS05410;Dbxref=Genbank:WP_269778266.1;Name=WP_269778266.1;Ontology_term=GO:0006812,GO:0008324,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,efflux transmembrane transporter activity|0015562||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: protein motif:HMM:TIGR01297.1;locus_tag=PKHYL_RS05410;product=cation diffusion facilitator family transporter;protein_id=WP_269778266.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1024968	1025315	.	-	.	ID=gene-PKHYL_RS05415;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=PKHYL_RS05415;old_locus_tag=PKHYL_12730
NZ_AP019516.1	Protein Homology	CDS	1024968	1025315	.	-	0	ID=cds-WP_240366172.1;Parent=gene-PKHYL_RS05415;Dbxref=Genbank:WP_240366172.1;Name=WP_240366172.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: protein motif:HMM:NF006975.0;locus_tag=PKHYL_RS05415;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_240366172.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1025771	1027883	.	+	.	ID=gene-PKHYL_RS05420;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=pseudogene;locus_tag=PKHYL_RS05420;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1025771	1027883	.	+	0	ID=cds-PKHYL_RS05420;Parent=gene-PKHYL_RS05420;Note=frameshifted;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280025.1;locus_tag=PKHYL_RS05420;product=excinuclease ABC subunit UvrB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1028062	1028334	.	+	.	ID=gene-PKHYL_RS05425;Name=PKHYL_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05425;old_locus_tag=PKHYL_12760
NZ_AP019516.1	GeneMarkS-2+	CDS	1028062	1028334	.	+	0	ID=cds-WP_143007408.1;Parent=gene-PKHYL_RS05425;Dbxref=Genbank:WP_143007408.1;Name=WP_143007408.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05425;product=hypothetical protein;protein_id=WP_143007408.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1028557	1028946	.	+	.	ID=gene-PKHYL_RS05430;Name=PKHYL_RS05430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05430;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1028557	1028946	.	+	0	ID=cds-PKHYL_RS05430;Parent=gene-PKHYL_RS05430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959367.1;locus_tag=PKHYL_RS05430;product=hypothetical protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1029053	1029442	.	-	.	ID=gene-PKHYL_RS05435;Name=PKHYL_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05435;old_locus_tag=PKHYL_12780
NZ_AP019516.1	Protein Homology	CDS	1029053	1029442	.	-	0	ID=cds-WP_071001935.1;Parent=gene-PKHYL_RS05435;Dbxref=Genbank:WP_071001935.1;Name=WP_071001935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513090.1;locus_tag=PKHYL_RS05435;product=hypothetical protein;protein_id=WP_071001935.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1029606	1030130	.	-	.	ID=gene-PKHYL_RS05440;Name=PKHYL_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05440;old_locus_tag=PKHYL_12790
NZ_AP019516.1	Protein Homology	CDS	1029606	1030130	.	-	0	ID=cds-WP_240366173.1;Parent=gene-PKHYL_RS05440;Dbxref=Genbank:WP_240366173.1;Name=WP_240366173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672800.1;locus_tag=PKHYL_RS05440;product=hypothetical protein;protein_id=WP_240366173.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1030459	1032301	.	+	.	ID=gene-PKHYL_RS05445;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=pseudogene;locus_tag=PKHYL_RS05445;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1030459	1032301	.	+	0	ID=cds-PKHYL_RS05445;Parent=gene-PKHYL_RS05445;Note=frameshifted;Ontology_term=GO:0006310,GO:0008297;gbkey=CDS;gene=recJ;go_function=single-stranded DNA exodeoxyribonuclease activity|0008297||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393910.1;locus_tag=PKHYL_RS05445;product=single-stranded-DNA-specific exonuclease RecJ;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1032369	1033035	.	-	.	ID=gene-PKHYL_RS05450;Name=PKHYL_RS05450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05450;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1032369	1033035	.	-	0	ID=cds-PKHYL_RS05450;Parent=gene-PKHYL_RS05450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513071.1;locus_tag=PKHYL_RS05450;product=trimeric intracellular cation channel family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1033107	1033742	.	-	.	ID=gene-PKHYL_RS05455;Name=PKHYL_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05455;old_locus_tag=PKHYL_12840
NZ_AP019516.1	Protein Homology	CDS	1033107	1033742	.	-	0	ID=cds-WP_240366174.1;Parent=gene-PKHYL_RS05455;Dbxref=Genbank:WP_240366174.1;Name=WP_240366174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443023.1;locus_tag=PKHYL_RS05455;product=trimeric intracellular cation channel family protein;protein_id=WP_240366174.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1033841	1034956	.	-	.	ID=gene-PKHYL_RS05460;Name=PKHYL_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05460;old_locus_tag=PKHYL_12850
NZ_AP019516.1	Protein Homology	CDS	1033841	1034956	.	-	0	ID=cds-WP_240366175.1;Parent=gene-PKHYL_RS05460;Dbxref=Genbank:WP_240366175.1;Name=WP_240366175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513073.1;locus_tag=PKHYL_RS05460;product=multidrug resistance efflux transporter family protein;protein_id=WP_240366175.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1035049	1035780	.	-	.	ID=gene-PKHYL_RS05465;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=PKHYL_RS05465;old_locus_tag=PKHYL_12860
NZ_AP019516.1	Protein Homology	CDS	1035049	1035780	.	-	0	ID=cds-WP_240366176.1;Parent=gene-PKHYL_RS05465;Dbxref=Genbank:WP_240366176.1;Name=WP_240366176.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513074.1;locus_tag=PKHYL_RS05465;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_240366176.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1036027	1036848	.	-	.	ID=gene-PKHYL_RS05470;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=PKHYL_RS05470;old_locus_tag=PKHYL_12870
NZ_AP019516.1	Protein Homology	CDS	1036027	1036848	.	-	0	ID=cds-WP_071001928.1;Parent=gene-PKHYL_RS05470;Dbxref=Genbank:WP_071001928.1;Name=WP_071001928.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960167.1;locus_tag=PKHYL_RS05470;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_071001928.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1037096	1038053	.	-	.	ID=gene-PKHYL_RS05475;Name=PKHYL_RS05475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05475;old_locus_tag=PKHYL_12880;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1037096	1038053	.	-	0	ID=cds-PKHYL_RS05475;Parent=gene-PKHYL_RS05475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443028.1;locus_tag=PKHYL_RS05475;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1038420	1039094	.	-	.	ID=gene-PKHYL_RS05480;Name=PKHYL_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05480;old_locus_tag=PKHYL_12910
NZ_AP019516.1	Protein Homology	CDS	1038420	1039094	.	-	0	ID=cds-WP_240366177.1;Parent=gene-PKHYL_RS05480;Dbxref=Genbank:WP_240366177.1;Name=WP_240366177.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=PKHYL_RS05480;product=LysR substrate-binding domain-containing protein;protein_id=WP_240366177.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1039091	1039450	.	-	.	ID=gene-PKHYL_RS05485;Name=PKHYL_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05485;old_locus_tag=PKHYL_12920
NZ_AP019516.1	Protein Homology	CDS	1039091	1039450	.	-	0	ID=cds-WP_071002208.1;Parent=gene-PKHYL_RS05485;Dbxref=Genbank:WP_071002208.1;Name=WP_071002208.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024752.2;locus_tag=PKHYL_RS05485;product=transposase;protein_id=WP_071002208.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1039502	1039921	.	-	.	ID=gene-PKHYL_RS05490;Name=PKHYL_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05490;old_locus_tag=PKHYL_12930
NZ_AP019516.1	Protein Homology	CDS	1039502	1039921	.	-	0	ID=cds-WP_240365372.1-3;Parent=gene-PKHYL_RS05490;Dbxref=Genbank:WP_240365372.1;Name=WP_240365372.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025000.2;locus_tag=PKHYL_RS05490;product=transposase family protein;protein_id=WP_240365372.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1039968	1040249	.	-	.	ID=gene-PKHYL_RS05495;Name=PKHYL_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05495;old_locus_tag=PKHYL_12940
NZ_AP019516.1	Protein Homology	CDS	1039968	1040249	.	-	0	ID=cds-WP_240366178.1;Parent=gene-PKHYL_RS05495;Dbxref=Genbank:WP_240366178.1;Name=WP_240366178.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012354.2;locus_tag=PKHYL_RS05495;product=LysR family transcriptional regulator;protein_id=WP_240366178.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1040384	1041521	.	+	.	ID=gene-PKHYL_RS05500;Name=PKHYL_RS05500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05500;old_locus_tag=PKHYL_12950;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1040384	1041521	.	+	0	ID=cds-PKHYL_RS05500;Parent=gene-PKHYL_RS05500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443524.1;locus_tag=PKHYL_RS05500;product=alkene reductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1041663	1041734	.	+	.	ID=gene-PKHYL_RS05505;Name=PKHYL_RS05505;end_range=1041734,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05505;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1041663	1041734	.	+	0	ID=cds-PKHYL_RS05505;Parent=gene-PKHYL_RS05505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1041734,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959606.1;locus_tag=PKHYL_RS05505;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1042085	1043105	.	+	.	ID=gene-PKHYL_RS05510;Name=PKHYL_RS05510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05510;old_locus_tag=PKHYL_12970;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1042085	1043105	.	+	0	ID=cds-PKHYL_RS05510;Parent=gene-PKHYL_RS05510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199517.1;locus_tag=PKHYL_RS05510;product=TAXI family TRAP transporter solute-binding subunit;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1043083	1043526	.	+	.	ID=gene-PKHYL_RS05515;Name=PKHYL_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05515;old_locus_tag=PKHYL_12990
NZ_AP019516.1	Protein Homology	CDS	1043083	1043526	.	+	0	ID=cds-WP_240366179.1;Parent=gene-PKHYL_RS05515;Dbxref=Genbank:WP_240366179.1;Name=WP_240366179.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020479.2;locus_tag=PKHYL_RS05515;product=DUF1850 domain-containing protein;protein_id=WP_240366179.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1043614	1045656	.	+	.	ID=gene-PKHYL_RS05520;Name=PKHYL_RS05520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05520;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1043614	1045656	.	+	0	ID=cds-PKHYL_RS05520;Parent=gene-PKHYL_RS05520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199522.1;locus_tag=PKHYL_RS05520;product=TRAP transporter permease;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1045799	1046842	.	-	.	ID=gene-PKHYL_RS05525;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=pseudogene;locus_tag=PKHYL_RS05525;old_locus_tag=PKHYL_13040;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1045799	1046842	.	-	0	ID=cds-PKHYL_RS05525;Parent=gene-PKHYL_RS05525;Note=frameshifted;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673081.1;locus_tag=PKHYL_RS05525;product=lipoyl synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1046962	1047375	.	-	.	ID=gene-PKHYL_RS05530;Name=PKHYL_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05530;old_locus_tag=PKHYL_13050
NZ_AP019516.1	Protein Homology	CDS	1046962	1047375	.	-	0	ID=cds-WP_058025284.1;Parent=gene-PKHYL_RS05530;Dbxref=Genbank:WP_058025284.1;Name=WP_058025284.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960170.1;locus_tag=PKHYL_RS05530;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_058025284.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1047699	1050302	.	+	.	ID=gene-PKHYL_RS05535;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=PKHYL_RS05535;old_locus_tag=PKHYL_13060
NZ_AP019516.1	Protein Homology	CDS	1047699	1050302	.	+	0	ID=cds-WP_071001922.1;Parent=gene-PKHYL_RS05535;Dbxref=Genbank:WP_071001922.1;Name=WP_071001922.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280032.1;locus_tag=PKHYL_RS05535;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_071001922.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1050544	1050987	.	+	.	ID=gene-PKHYL_RS05540;Name=PKHYL_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05540;old_locus_tag=PKHYL_13070
NZ_AP019516.1	Protein Homology	CDS	1050544	1050987	.	+	0	ID=cds-WP_083328840.1;Parent=gene-PKHYL_RS05540;Dbxref=Genbank:WP_083328840.1;Name=WP_083328840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199537.1;locus_tag=PKHYL_RS05540;product=PACE efflux transporter;protein_id=WP_083328840.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1051108	1051905	.	-	.	ID=gene-PKHYL_RS05545;Name=PKHYL_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05545;old_locus_tag=PKHYL_13080
NZ_AP019516.1	Protein Homology	CDS	1051108	1051905	.	-	0	ID=cds-WP_071001921.1;Parent=gene-PKHYL_RS05545;Dbxref=Genbank:WP_071001921.1;Name=WP_071001921.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443046.1;locus_tag=PKHYL_RS05545;product=enoyl-CoA hydratase-related protein;protein_id=WP_071001921.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1052279	1052794	.	+	.	ID=gene-PKHYL_RS05550;Name=PKHYL_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05550;old_locus_tag=PKHYL_13090
NZ_AP019516.1	Protein Homology	CDS	1052279	1052794	.	+	0	ID=cds-WP_240366180.1;Parent=gene-PKHYL_RS05550;Dbxref=Genbank:WP_240366180.1;Name=WP_240366180.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023568.2;locus_tag=PKHYL_RS05550;product=alpha/beta hydrolase;protein_id=WP_240366180.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1052769	1053092	.	+	.	ID=gene-PKHYL_RS05555;Name=PKHYL_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05555;old_locus_tag=PKHYL_13100
NZ_AP019516.1	Protein Homology	CDS	1052769	1053092	.	+	0	ID=cds-WP_240366181.1;Parent=gene-PKHYL_RS05555;Dbxref=Genbank:WP_240366181.1;Name=WP_240366181.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019982.2;locus_tag=PKHYL_RS05555;product=alpha/beta hydrolase;protein_id=WP_240366181.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1053224	1054306	.	-	.	ID=gene-PKHYL_RS05560;Name=PKHYL_RS05560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05560;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1053224	1054306	.	-	0	ID=cds-PKHYL_RS05560;Parent=gene-PKHYL_RS05560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443048.1;locus_tag=PKHYL_RS05560;product=HpcH/HpaI aldolase/citrate lyase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1054376	1055557	.	-	.	ID=gene-PKHYL_RS05565;Name=PKHYL_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05565;old_locus_tag=PKHYL_13140
NZ_AP019516.1	Protein Homology	CDS	1054376	1055557	.	-	0	ID=cds-WP_240366182.1;Parent=gene-PKHYL_RS05565;Dbxref=Genbank:WP_240366182.1;Name=WP_240366182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018678209.1;locus_tag=PKHYL_RS05565;product=tellurite-like stress resistance cysteine protease StiP;protein_id=WP_240366182.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1055660	1056477	.	-	.	ID=gene-PKHYL_RS05570;Name=PKHYL_RS05570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05570;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1055660	1056477	.	-	0	ID=cds-PKHYL_RS05570;Parent=gene-PKHYL_RS05570;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443050.1;locus_tag=PKHYL_RS05570;product=hypothetical protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1056520	1056744	.	-	.	ID=gene-PKHYL_RS05575;Name=PKHYL_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05575;old_locus_tag=PKHYL_13180
NZ_AP019516.1	Protein Homology	CDS	1056520	1056744	.	-	0	ID=cds-WP_240366183.1;Parent=gene-PKHYL_RS05575;Dbxref=Genbank:WP_240366183.1;Name=WP_240366183.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023915.2;locus_tag=PKHYL_RS05575;product=TRSP domain-containing protein;protein_id=WP_240366183.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1056758	1057837	.	-	.	ID=gene-PKHYL_RS05580;Name=PKHYL_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05580;old_locus_tag=PKHYL_13190
NZ_AP019516.1	Protein Homology	CDS	1056758	1057837	.	-	0	ID=cds-WP_240366184.1;Parent=gene-PKHYL_RS05580;Dbxref=Genbank:WP_240366184.1;Name=WP_240366184.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026947.2;locus_tag=PKHYL_RS05580;product=phosphoribosyltransferase domain-containing protein;protein_id=WP_240366184.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1057886	1058179	.	-	.	ID=gene-PKHYL_RS05585;Name=PKHYL_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05585;old_locus_tag=PKHYL_13200
NZ_AP019516.1	Protein Homology	CDS	1057886	1058179	.	-	0	ID=cds-WP_240366185.1;Parent=gene-PKHYL_RS05585;Dbxref=Genbank:WP_240366185.1;Name=WP_240366185.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024278.2;locus_tag=PKHYL_RS05585;product=OST-HTH/LOTUS domain-containing protein;protein_id=WP_240366185.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1058201	1058974	.	-	.	ID=gene-PKHYL_RS05590;Name=PKHYL_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05590;old_locus_tag=PKHYL_13210
NZ_AP019516.1	Protein Homology	CDS	1058201	1058974	.	-	0	ID=cds-WP_240366186.1;Parent=gene-PKHYL_RS05590;Dbxref=Genbank:WP_240366186.1;Name=WP_240366186.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014045.2;locus_tag=PKHYL_RS05590;product=NYN domain-containing protein;protein_id=WP_240366186.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1059035	1060255	.	-	.	ID=gene-PKHYL_RS05595;Name=PKHYL_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05595;old_locus_tag=PKHYL_13220
NZ_AP019516.1	Protein Homology	CDS	1059035	1060255	.	-	0	ID=cds-WP_240366187.1;Parent=gene-PKHYL_RS05595;Dbxref=Genbank:WP_240366187.1;Name=WP_240366187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199548.1;locus_tag=PKHYL_RS05595;product=serine protease;protein_id=WP_240366187.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1060322	1061468	.	-	.	ID=gene-PKHYL_RS05600;Name=PKHYL_RS05600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05600;old_locus_tag=PKHYL_13230;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1060322	1061468	.	-	0	ID=cds-PKHYL_RS05600;Parent=gene-PKHYL_RS05600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443056.1;locus_tag=PKHYL_RS05600;product=ATP-grasp domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1061762	1063009	.	+	.	ID=gene-PKHYL_RS05605;Name=PKHYL_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05605;old_locus_tag=PKHYL_13250
NZ_AP019516.1	Protein Homology	CDS	1061762	1063009	.	+	0	ID=cds-WP_071001912.1;Parent=gene-PKHYL_RS05605;Dbxref=Genbank:WP_071001912.1;Name=WP_071001912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443057.1;locus_tag=PKHYL_RS05605;product=TerD family protein;protein_id=WP_071001912.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1063287	1063865	.	-	.	ID=gene-PKHYL_RS05610;Name=PKHYL_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05610;old_locus_tag=PKHYL_13260
NZ_AP019516.1	Protein Homology	CDS	1063287	1063865	.	-	0	ID=cds-WP_240366497.1;Parent=gene-PKHYL_RS05610;Dbxref=Genbank:WP_240366497.1;Name=WP_240366497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394551.1;locus_tag=PKHYL_RS05610;product=TerD family protein;protein_id=WP_240366497.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1063952	1064703	.	-	.	ID=gene-PKHYL_RS05615;Name=PKHYL_RS05615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05615;old_locus_tag=PKHYL_13270;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1063952	1064703	.	-	0	ID=cds-PKHYL_RS05615;Parent=gene-PKHYL_RS05615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513116.1;locus_tag=PKHYL_RS05615;product=TIGR00266 family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1064912	1065486	.	-	.	ID=gene-PKHYL_RS05620;Name=PKHYL_RS05620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05620;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1064912	1065486	.	-	0	ID=cds-PKHYL_RS05620;Parent=gene-PKHYL_RS05620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019458110.1;locus_tag=PKHYL_RS05620;product=TerD family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1066070	1067131	.	-	.	ID=gene-PKHYL_RS05625;Name=PKHYL_RS05625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05625;old_locus_tag=PKHYL_13290;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1066070	1067131	.	-	0	ID=cds-PKHYL_RS05625;Parent=gene-PKHYL_RS05625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199578.1;locus_tag=PKHYL_RS05625;product=DUF475 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1067354	1067929	.	-	.	ID=gene-PKHYL_RS05630;Name=PKHYL_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05630;old_locus_tag=PKHYL_13320
NZ_AP019516.1	Protein Homology	CDS	1067354	1067929	.	-	0	ID=cds-WP_058024753.1;Parent=gene-PKHYL_RS05630;Dbxref=Genbank:WP_058024753.1;Name=WP_058024753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513118.1;locus_tag=PKHYL_RS05630;product=TerD family protein;protein_id=WP_058024753.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1068188	1070443	.	-	.	ID=gene-PKHYL_RS05635;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=pseudogene;locus_tag=PKHYL_RS05635;old_locus_tag=PKHYL_13340;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1068188	1070443	.	-	0	ID=cds-PKHYL_RS05635;Parent=gene-PKHYL_RS05635;Note=frameshifted;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443061.1;locus_tag=PKHYL_RS05635;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1070721	1071918	.	-	.	ID=gene-PKHYL_RS05640;Name=PKHYL_RS05640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05640;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1070721	1071918	.	-	0	ID=cds-PKHYL_RS05640;Parent=gene-PKHYL_RS05640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513120.1;locus_tag=PKHYL_RS05640;product=mechanosensitive ion channel family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1072054	1072557	.	-	.	ID=gene-PKHYL_RS05645;Name=PKHYL_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05645;old_locus_tag=PKHYL_13370
NZ_AP019516.1	Protein Homology	CDS	1072054	1072557	.	-	0	ID=cds-WP_240366188.1;Parent=gene-PKHYL_RS05645;Dbxref=Genbank:WP_240366188.1;Name=WP_240366188.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014860.2;locus_tag=PKHYL_RS05645;product=hypothetical protein;protein_id=WP_240366188.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1072530	1073099	.	-	.	ID=gene-PKHYL_RS05650;Name=PKHYL_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05650;old_locus_tag=PKHYL_13380
NZ_AP019516.1	Protein Homology	CDS	1072530	1073099	.	-	0	ID=cds-WP_240366498.1;Parent=gene-PKHYL_RS05650;Dbxref=Genbank:WP_240366498.1;Name=WP_240366498.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF019604.2;locus_tag=PKHYL_RS05650;product=FAD-dependent oxidoreductase;protein_id=WP_240366498.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1073149	1073475	.	-	.	ID=gene-PKHYL_RS05655;Name=PKHYL_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05655;old_locus_tag=PKHYL_13390
NZ_AP019516.1	Protein Homology	CDS	1073149	1073475	.	-	0	ID=cds-WP_240366499.1;Parent=gene-PKHYL_RS05655;Dbxref=Genbank:WP_240366499.1;Name=WP_240366499.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF019604.2;locus_tag=PKHYL_RS05655;product=FAD-dependent oxidoreductase;protein_id=WP_240366499.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1073663	1074160	.	-	.	ID=gene-PKHYL_RS05660;Name=PKHYL_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05660;old_locus_tag=PKHYL_13400
NZ_AP019516.1	Protein Homology	CDS	1073663	1074160	.	-	0	ID=cds-WP_071001904.1;Parent=gene-PKHYL_RS05660;Dbxref=Genbank:WP_071001904.1;Name=WP_071001904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199592.1;locus_tag=PKHYL_RS05660;product=peroxiredoxin;protein_id=WP_071001904.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1074376	1074675	.	-	.	ID=gene-PKHYL_RS05665;Name=PKHYL_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05665;old_locus_tag=PKHYL_13410
NZ_AP019516.1	GeneMarkS-2+	CDS	1074376	1074675	.	-	0	ID=cds-WP_240366189.1;Parent=gene-PKHYL_RS05665;Dbxref=Genbank:WP_240366189.1;Name=WP_240366189.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05665;product=hypothetical protein;protein_id=WP_240366189.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1074952	1075703	.	-	.	ID=gene-PKHYL_RS05670;Name=queC;gbkey=Gene;gene=queC;gene_biotype=pseudogene;locus_tag=PKHYL_RS05670;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1074952	1075703	.	-	0	ID=cds-PKHYL_RS05670;Parent=gene-PKHYL_RS05670;Note=frameshifted%3B internal stop;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960983.1;locus_tag=PKHYL_RS05670;product=7-cyano-7-deazaguanine synthase QueC;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1076013	1077155	.	+	.	ID=gene-PKHYL_RS05675;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=pseudogene;locus_tag=PKHYL_RS05675;old_locus_tag=PKHYL_13450;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1076013	1077155	.	+	0	ID=cds-PKHYL_RS05675;Parent=gene-PKHYL_RS05675;Note=frameshifted;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199597.1;locus_tag=PKHYL_RS05675;product=tRNA 2-thiocytidine(32) synthetase TtcA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1077294	1077842	.	-	.	ID=gene-PKHYL_RS05680;Name=PKHYL_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05680;old_locus_tag=PKHYL_13460
NZ_AP019516.1	Protein Homology	CDS	1077294	1077842	.	-	0	ID=cds-WP_240366190.1;Parent=gene-PKHYL_RS05680;Dbxref=Genbank:WP_240366190.1;Name=WP_240366190.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017559.2;locus_tag=PKHYL_RS05680;product=FixH family protein;protein_id=WP_240366190.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1078036	1078650	.	-	.	ID=gene-PKHYL_RS05685;Name=PKHYL_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05685;old_locus_tag=PKHYL_13470
NZ_AP019516.1	Protein Homology	CDS	1078036	1078650	.	-	0	ID=cds-WP_240366191.1;Parent=gene-PKHYL_RS05685;Dbxref=Genbank:WP_240366191.1;Name=WP_240366191.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023045.2;locus_tag=PKHYL_RS05685;product=hypothetical protein;protein_id=WP_240366191.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1078592	1078744	.	-	.	ID=gene-PKHYL_RS05690;Name=PKHYL_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05690
NZ_AP019516.1	Protein Homology	CDS	1078592	1078744	.	-	0	ID=cds-WP_240366192.1;Parent=gene-PKHYL_RS05690;Dbxref=Genbank:WP_240366192.1;Name=WP_240366192.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025121.2;locus_tag=PKHYL_RS05690;product=hypothetical protein;protein_id=WP_240366192.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1078737	1079210	.	-	.	ID=gene-PKHYL_RS05695;Name=PKHYL_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05695;old_locus_tag=PKHYL_13480
NZ_AP019516.1	GeneMarkS-2+	CDS	1078737	1079210	.	-	0	ID=cds-WP_240366193.1;Parent=gene-PKHYL_RS05695;Dbxref=Genbank:WP_240366193.1;Name=WP_240366193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05695;product=4Fe-4S binding protein;protein_id=WP_240366193.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1079859	1081055	.	-	.	ID=gene-PKHYL_RS05700;Name=ccoP;gbkey=Gene;gene=ccoP;gene_biotype=pseudogene;locus_tag=PKHYL_RS05700;old_locus_tag=PKHYL_13490;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1079859	1081055	.	-	0	ID=cds-PKHYL_RS05700;Parent=gene-PKHYL_RS05700;Note=internal stop;Ontology_term=GO:0004129;gbkey=CDS;gene=ccoP;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501139.1;locus_tag=PKHYL_RS05700;product=cytochrome-c oxidase%2C cbb3-type subunit III;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1081003	1081182	.	-	.	ID=gene-PKHYL_RS05705;Name=PKHYL_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05705;old_locus_tag=PKHYL_13500
NZ_AP019516.1	Protein Homology	CDS	1081003	1081182	.	-	0	ID=cds-WP_058024764.1;Parent=gene-PKHYL_RS05705;Dbxref=Genbank:WP_058024764.1;Name=WP_058024764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513129.1;locus_tag=PKHYL_RS05705;product=CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone;protein_id=WP_058024764.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1081182	1081820	.	-	.	ID=gene-PKHYL_RS05710;Name=ccoO;gbkey=Gene;gene=ccoO;gene_biotype=protein_coding;locus_tag=PKHYL_RS05710;old_locus_tag=PKHYL_13510
NZ_AP019516.1	Protein Homology	CDS	1081182	1081820	.	-	0	ID=cds-WP_071001898.1;Parent=gene-PKHYL_RS05710;Dbxref=Genbank:WP_071001898.1;Name=WP_071001898.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ccoO;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395385.1;locus_tag=PKHYL_RS05710;product=cytochrome-c oxidase%2C cbb3-type subunit II;protein_id=WP_071001898.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1081830	1083312	.	-	.	ID=gene-PKHYL_RS05715;Name=ccoN;gbkey=Gene;gene=ccoN;gene_biotype=pseudogene;locus_tag=PKHYL_RS05715;old_locus_tag=PKHYL_13520;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1081830	1083312	.	-	0	ID=cds-PKHYL_RS05715;Parent=gene-PKHYL_RS05715;Note=frameshifted;Ontology_term=GO:0004129;gbkey=CDS;gene=ccoN;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513131.1;locus_tag=PKHYL_RS05715;product=cytochrome-c oxidase%2C cbb3-type subunit I;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1084212	1084555	.	+	.	ID=gene-PKHYL_RS05720;Name=PKHYL_RS05720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05720;old_locus_tag=PKHYL_13530;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1084212	1084555	.	+	0	ID=cds-PKHYL_RS05720;Parent=gene-PKHYL_RS05720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199611.1;locus_tag=PKHYL_RS05720;product=SCP-2 sterol transfer family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1084693	1085663	.	-	.	ID=gene-PKHYL_RS05725;Name=PKHYL_RS05725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05725;old_locus_tag=PKHYL_13540;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1084693	1085663	.	-	0	ID=cds-PKHYL_RS05725;Parent=gene-PKHYL_RS05725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280060.1;locus_tag=PKHYL_RS05725;product=hypothetical protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1086113	1087346	.	+	.	ID=gene-PKHYL_RS05730;Name=PKHYL_RS05730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05730;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1086113	1087346	.	+	0	ID=cds-PKHYL_RS05730;Parent=gene-PKHYL_RS05730;Note=frameshifted;Ontology_term=GO:0042953,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004878461.1;locus_tag=PKHYL_RS05730;product=lipoprotein-releasing ABC transporter permease subunit;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1087379	1088059	.	+	.	ID=gene-PKHYL_RS05735;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=PKHYL_RS05735;old_locus_tag=PKHYL_13570
NZ_AP019516.1	Protein Homology	CDS	1087379	1088059	.	+	0	ID=cds-WP_071001893.1;Parent=gene-PKHYL_RS05735;Dbxref=Genbank:WP_071001893.1;Name=WP_071001893.1;Ontology_term=GO:0042953,GO:0005524,GO:0043190;gbkey=CDS;gene=lolD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513135.1;locus_tag=PKHYL_RS05735;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_071001893.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1088228	1088365	.	+	.	ID=gene-PKHYL_RS05740;Name=PKHYL_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05740;old_locus_tag=PKHYL_13580
NZ_AP019516.1	GeneMarkS-2+	CDS	1088228	1088365	.	+	0	ID=cds-WP_240366194.1;Parent=gene-PKHYL_RS05740;Dbxref=Genbank:WP_240366194.1;Name=WP_240366194.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05740;product=hypothetical protein;protein_id=WP_240366194.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1088358	1088531	.	+	.	ID=gene-PKHYL_RS05745;Name=PKHYL_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05745;old_locus_tag=PKHYL_13590
NZ_AP019516.1	GeneMarkS-2+	CDS	1088358	1088531	.	+	0	ID=cds-WP_240366195.1;Parent=gene-PKHYL_RS05745;Dbxref=Genbank:WP_240366195.1;Name=WP_240366195.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05745;product=hypothetical protein;protein_id=WP_240366195.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1088601	1088843	.	-	.	ID=gene-PKHYL_RS05750;Name=PKHYL_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05750;old_locus_tag=PKHYL_13600
NZ_AP019516.1	GeneMarkS-2+	CDS	1088601	1088843	.	-	0	ID=cds-WP_240366196.1;Parent=gene-PKHYL_RS05750;Dbxref=Genbank:WP_240366196.1;Name=WP_240366196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05750;product=hypothetical protein;protein_id=WP_240366196.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1088860	1089177	.	-	.	ID=gene-PKHYL_RS05755;Name=PKHYL_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05755;old_locus_tag=PKHYL_13610
NZ_AP019516.1	Protein Homology	CDS	1088860	1089177	.	-	0	ID=cds-WP_240366197.1;Parent=gene-PKHYL_RS05755;Dbxref=Genbank:WP_240366197.1;Name=WP_240366197.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021363.2;locus_tag=PKHYL_RS05755;product=DUF2062 domain-containing protein;protein_id=WP_240366197.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1089476	1090132	.	+	.	ID=gene-PKHYL_RS05760;Name=PKHYL_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05760;old_locus_tag=PKHYL_13620
NZ_AP019516.1	GeneMarkS-2+	CDS	1089476	1090132	.	+	0	ID=cds-WP_240366198.1;Parent=gene-PKHYL_RS05760;Dbxref=Genbank:WP_240366198.1;Name=WP_240366198.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05760;product=hypothetical protein;protein_id=WP_240366198.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1090162	1092432	.	+	.	ID=gene-PKHYL_RS05765;Name=PKHYL_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05765;old_locus_tag=PKHYL_13630
NZ_AP019516.1	Protein Homology	CDS	1090162	1092432	.	+	0	ID=cds-WP_240366199.1;Parent=gene-PKHYL_RS05765;Dbxref=Genbank:WP_240366199.1;Name=WP_240366199.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015714.2;locus_tag=PKHYL_RS05765;product=ComEC/Rec2 family competence protein;protein_id=WP_240366199.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1092692	1093561	.	+	.	ID=gene-PKHYL_RS05770;Name=sppA;end_range=1093561,.;gbkey=Gene;gene=sppA;gene_biotype=pseudogene;locus_tag=PKHYL_RS05770;old_locus_tag=PKHYL_13640;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1092692	1093561	.	+	0	ID=cds-PKHYL_RS05770;Parent=gene-PKHYL_RS05770;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006465,GO:0004252;end_range=1093561,.;gbkey=CDS;gene=sppA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520072.1;locus_tag=PKHYL_RS05770;partial=true;product=signal peptide peptidase SppA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1093838	1094727	.	+	.	ID=gene-PKHYL_RS05775;Name=PKHYL_RS05775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05775;old_locus_tag=PKHYL_13650;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1093838	1094727	.	+	0	ID=cds-PKHYL_RS05775;Parent=gene-PKHYL_RS05775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199629.1;locus_tag=PKHYL_RS05775;product=alpha/beta hydrolase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1094792	1095583	.	+	.	ID=gene-PKHYL_RS05780;Name=PKHYL_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05780;old_locus_tag=PKHYL_13660
NZ_AP019516.1	Protein Homology	CDS	1094792	1095583	.	+	0	ID=cds-WP_240366500.1;Parent=gene-PKHYL_RS05780;Dbxref=Genbank:WP_240366500.1;Name=WP_240366500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_058025690.1;locus_tag=PKHYL_RS05780;product=type II CAAX endopeptidase family protein;protein_id=WP_240366500.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1095650	1096633	.	-	.	ID=gene-PKHYL_RS05785;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=PKHYL_RS05785;old_locus_tag=PKHYL_13670
NZ_AP019516.1	Protein Homology	CDS	1095650	1096633	.	-	0	ID=cds-WP_071001888.1;Parent=gene-PKHYL_RS05785;Dbxref=Genbank:WP_071001888.1;Name=WP_071001888.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199634.1;locus_tag=PKHYL_RS05785;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_071001888.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1096889	1097647	.	-	.	ID=gene-PKHYL_RS05790;Name=PKHYL_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05790;old_locus_tag=PKHYL_13680
NZ_AP019516.1	GeneMarkS-2+	CDS	1096889	1097647	.	-	0	ID=cds-WP_240366200.1;Parent=gene-PKHYL_RS05790;Dbxref=Genbank:WP_240366200.1;Name=WP_240366200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05790;product=hypothetical protein;protein_id=WP_240366200.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1097765	1098043	.	-	.	ID=gene-PKHYL_RS05795;Name=PKHYL_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05795;old_locus_tag=PKHYL_13690
NZ_AP019516.1	GeneMarkS-2+	CDS	1097765	1098043	.	-	0	ID=cds-WP_240366201.1;Parent=gene-PKHYL_RS05795;Dbxref=Genbank:WP_240366201.1;Name=WP_240366201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05795;product=hypothetical protein;protein_id=WP_240366201.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1098266	1099907	.	-	.	ID=gene-PKHYL_RS05800;Name=PKHYL_RS05800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05800;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1098266	1099907	.	-	0	ID=cds-PKHYL_RS05800;Parent=gene-PKHYL_RS05800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443080.1;locus_tag=PKHYL_RS05800;product=phospholipase D family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1100345	1101636	.	+	.	ID=gene-PKHYL_RS05805;Name=PKHYL_RS05805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05805;old_locus_tag=PKHYL_13740;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1100345	1101636	.	+	0	ID=cds-PKHYL_RS05805;Parent=gene-PKHYL_RS05805;Note=frameshifted;Ontology_term=GO:0019346,GO:0071268,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA,homocysteine biosynthetic process|0071268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513145.1;locus_tag=PKHYL_RS05805;product=O-succinylhomoserine sulfhydrylase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1101717	1102046	.	+	.	ID=gene-PKHYL_RS05810;Name=PKHYL_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05810;old_locus_tag=PKHYL_13750
NZ_AP019516.1	Protein Homology	CDS	1101717	1102046	.	+	0	ID=cds-WP_025651278.1;Parent=gene-PKHYL_RS05810;Dbxref=Genbank:WP_025651278.1;Name=WP_025651278.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280073.1;locus_tag=PKHYL_RS05810;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_025651278.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1102165	1102809	.	+	.	ID=gene-PKHYL_RS05815;Name=recR;gbkey=Gene;gene=recR;gene_biotype=pseudogene;locus_tag=PKHYL_RS05815;old_locus_tag=PKHYL_13760;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1102165	1102809	.	+	0	ID=cds-PKHYL_RS05815;Parent=gene-PKHYL_RS05815;Note=frameshifted;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004879447.1;locus_tag=PKHYL_RS05815;product=recombination mediator RecR;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1102895	1103380	.	+	.	ID=gene-PKHYL_RS05820;Name=PKHYL_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05820;old_locus_tag=PKHYL_13780
NZ_AP019516.1	Protein Homology	CDS	1102895	1103380	.	+	0	ID=cds-WP_269778267.1;Parent=gene-PKHYL_RS05820;Dbxref=Genbank:WP_269778267.1;Name=WP_269778267.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013755.2;locus_tag=PKHYL_RS05820;product=hypothetical protein;protein_id=WP_269778267.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1103377	1104036	.	+	.	ID=gene-PKHYL_RS17255;Name=PKHYL_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17255;old_locus_tag=PKHYL_13790
NZ_AP019516.1	Protein Homology	CDS	1103377	1104036	.	+	0	ID=cds-WP_269778268.1;Parent=gene-PKHYL_RS17255;Dbxref=Genbank:WP_269778268.1;Name=WP_269778268.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: protein motif:HMM:NF013755.2;locus_tag=PKHYL_RS17255;product=HRDC domain-containing protein;protein_id=WP_269778268.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1104059	1104247	.	+	.	ID=gene-PKHYL_RS05830;Name=PKHYL_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05830;old_locus_tag=PKHYL_13800
NZ_AP019516.1	GeneMarkS-2+	CDS	1104059	1104247	.	+	0	ID=cds-WP_240366202.1;Parent=gene-PKHYL_RS05830;Dbxref=Genbank:WP_240366202.1;Name=WP_240366202.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05830;product=hypothetical protein;protein_id=WP_240366202.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1104240	1104398	.	-	.	ID=gene-PKHYL_RS05835;Name=PKHYL_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05835;old_locus_tag=PKHYL_13810
NZ_AP019516.1	GeneMarkS-2+	CDS	1104240	1104398	.	-	0	ID=cds-WP_156770969.1;Parent=gene-PKHYL_RS05835;Dbxref=Genbank:WP_156770969.1;Name=WP_156770969.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05835;product=hypothetical protein;protein_id=WP_156770969.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1104453	1105143	.	-	.	ID=gene-PKHYL_RS05840;Name=PKHYL_RS05840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05840;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1104453	1105143	.	-	0	ID=cds-PKHYL_RS05840;Parent=gene-PKHYL_RS05840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443084.1;locus_tag=PKHYL_RS05840;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1105508	1105891	.	+	.	ID=gene-PKHYL_RS05845;Name=PKHYL_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05845;old_locus_tag=PKHYL_13840
NZ_AP019516.1	GeneMarkS-2+	CDS	1105508	1105891	.	+	0	ID=cds-WP_093068134.1;Parent=gene-PKHYL_RS05845;Dbxref=Genbank:WP_093068134.1;Name=WP_093068134.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05845;product=hypothetical protein;protein_id=WP_093068134.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1106000	1108895	.	-	.	ID=gene-PKHYL_RS05850;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=pseudogene;locus_tag=PKHYL_RS05850;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1106000	1108895	.	-	0	ID=cds-PKHYL_RS05850;Parent=gene-PKHYL_RS05850;Note=frameshifted;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443085.1;locus_tag=PKHYL_RS05850;product=aminomethyl-transferring glycine dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1108981	1109739	.	-	.	ID=gene-PKHYL_RS05855;Name=PKHYL_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05855;old_locus_tag=PKHYL_13880
NZ_AP019516.1	Protein Homology	CDS	1108981	1109739	.	-	0	ID=cds-WP_212564370.1;Parent=gene-PKHYL_RS05855;Dbxref=Genbank:WP_212564370.1;Name=WP_212564370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443086.1;locus_tag=PKHYL_RS05855;product=nitroreductase family protein;protein_id=WP_212564370.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1110051	1110431	.	-	.	ID=gene-PKHYL_RS05860;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=PKHYL_RS05860;old_locus_tag=PKHYL_13890
NZ_AP019516.1	Protein Homology	CDS	1110051	1110431	.	-	0	ID=cds-WP_071001880.1;Parent=gene-PKHYL_RS05860;Dbxref=Genbank:WP_071001880.1;Name=WP_071001880.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280078.1;locus_tag=PKHYL_RS05860;product=glycine cleavage system protein GcvH;protein_id=WP_071001880.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1110547	1111728	.	-	.	ID=gene-PKHYL_RS05865;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=PKHYL_RS05865;old_locus_tag=PKHYL_13900
NZ_AP019516.1	Protein Homology	CDS	1110547	1111728	.	-	0	ID=cds-WP_071001879.1;Parent=gene-PKHYL_RS05865;Dbxref=Genbank:WP_071001879.1;Name=WP_071001879.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443087.1;locus_tag=PKHYL_RS05865;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_071001879.1;transl_table=11
NZ_AP019516.1	cmsearch	riboswitch	1111894	1112039	.	-	.	ID=id-NZ_AP019516.1:1111894..1112039;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_AP019516.1	cmsearch	riboswitch	1112106	1112244	.	-	.	ID=id-NZ_AP019516.1:1112106..1112244;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_AP019516.1	RefSeq	gene	1112505	1112825	.	+	.	ID=gene-PKHYL_RS05870;Name=PKHYL_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05870;old_locus_tag=PKHYL_13910
NZ_AP019516.1	Protein Homology	CDS	1112505	1112825	.	+	0	ID=cds-WP_071001878.1;Parent=gene-PKHYL_RS05870;Dbxref=Genbank:WP_071001878.1;Name=WP_071001878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108069.1;locus_tag=PKHYL_RS05870;product=YcgL domain-containing protein;protein_id=WP_071001878.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1113102	1113770	.	+	.	ID=gene-PKHYL_RS05875;Name=PKHYL_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05875;old_locus_tag=PKHYL_13920
NZ_AP019516.1	Protein Homology	CDS	1113102	1113770	.	+	0	ID=cds-WP_227674256.1;Parent=gene-PKHYL_RS05875;Dbxref=Genbank:WP_227674256.1;Name=WP_227674256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443089.1;locus_tag=PKHYL_RS05875;product=hypothetical protein;protein_id=WP_227674256.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1114074	1114927	.	+	.	ID=gene-PKHYL_RS05880;Name=PKHYL_RS05880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05880;old_locus_tag=PKHYL_13930;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1114074	1114927	.	+	0	ID=cds-PKHYL_RS05880;Parent=gene-PKHYL_RS05880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004995319.1;locus_tag=PKHYL_RS05880;product=MoxR family ATPase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1114985	1116205	.	+	.	ID=gene-PKHYL_RS05885;Name=PKHYL_RS05885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05885;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1114985	1116205	.	+	0	ID=cds-PKHYL_RS05885;Parent=gene-PKHYL_RS05885;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009393405.1;locus_tag=PKHYL_RS05885;product=VWA domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1116361	1117170	.	-	.	ID=gene-PKHYL_RS05890;Name=PKHYL_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05890;old_locus_tag=PKHYL_13980
NZ_AP019516.1	Protein Homology	CDS	1116361	1117170	.	-	0	ID=cds-WP_071001875.1;Parent=gene-PKHYL_RS05890;Dbxref=Genbank:WP_071001875.1;Name=WP_071001875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199689.1;locus_tag=PKHYL_RS05890;product=phosphodiester glycosidase family protein;protein_id=WP_071001875.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1117245	1118942	.	-	.	ID=gene-PKHYL_RS05895;Name=PKHYL_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05895;old_locus_tag=PKHYL_13990
NZ_AP019516.1	Protein Homology	CDS	1117245	1118942	.	-	0	ID=cds-WP_240366203.1;Parent=gene-PKHYL_RS05895;Dbxref=Genbank:WP_240366203.1;Name=WP_240366203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395572.1;locus_tag=PKHYL_RS05895;product=FMN-binding glutamate synthase family protein;protein_id=WP_240366203.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1119191	1120290	.	-	.	ID=gene-PKHYL_RS05900;Name=rtcA;gbkey=Gene;gene=rtcA;gene_biotype=pseudogene;locus_tag=PKHYL_RS05900;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1119191	1120290	.	-	0	ID=cds-PKHYL_RS05900;Parent=gene-PKHYL_RS05900;Note=frameshifted%3B internal stop;Ontology_term=GO:0006396,GO:0003963;gbkey=CDS;gene=rtcA;go_function=RNA-3'-phosphate cyclase activity|0003963||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004671449.1;locus_tag=PKHYL_RS05900;product=RNA 3'-terminal phosphate cyclase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1120633	1121091	.	-	.	ID=gene-PKHYL_RS05905;Name=PKHYL_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05905;old_locus_tag=PKHYL_14020
NZ_AP019516.1	Protein Homology	CDS	1120633	1121091	.	-	0	ID=cds-WP_071001872.1;Parent=gene-PKHYL_RS05905;Dbxref=Genbank:WP_071001872.1;Name=WP_071001872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019457118.1;locus_tag=PKHYL_RS05905;product=DIP1984 family protein;protein_id=WP_071001872.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1121103	1121831	.	-	.	ID=gene-PKHYL_RS05910;Name=PKHYL_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05910;old_locus_tag=PKHYL_14030
NZ_AP019516.1	GeneMarkS-2+	CDS	1121103	1121831	.	-	0	ID=cds-WP_071001871.1;Parent=gene-PKHYL_RS05910;Dbxref=Genbank:WP_071001871.1;Name=WP_071001871.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05910;product=hypothetical protein;protein_id=WP_071001871.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1121906	1123139	.	-	.	ID=gene-PKHYL_RS05915;Name=PKHYL_RS05915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS05915;old_locus_tag=PKHYL_14050;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1121906	1123139	.	-	0	ID=cds-PKHYL_RS05915;Parent=gene-PKHYL_RS05915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010591562.1;locus_tag=PKHYL_RS05915;product=RtcB family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1123425	1124345	.	+	.	ID=gene-PKHYL_RS05920;Name=PKHYL_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05920;old_locus_tag=PKHYL_14060
NZ_AP019516.1	Protein Homology	CDS	1123425	1124345	.	+	0	ID=cds-WP_240366204.1;Parent=gene-PKHYL_RS05920;Dbxref=Genbank:WP_240366204.1;Name=WP_240366204.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012546.2;locus_tag=PKHYL_RS05920;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_240366204.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1124357	1126018	.	+	.	ID=gene-PKHYL_RS05925;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=PKHYL_RS05925;old_locus_tag=PKHYL_14070
NZ_AP019516.1	Protein Homology	CDS	1124357	1126018	.	+	0	ID=cds-WP_071001868.1;Parent=gene-PKHYL_RS05925;Dbxref=Genbank:WP_071001868.1;Name=WP_071001868.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005204249.1;locus_tag=PKHYL_RS05925;product=RNA repair transcriptional activator RtcR;protein_id=WP_071001868.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1126037	1126801	.	+	.	ID=gene-PKHYL_RS05930;Name=PKHYL_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05930;old_locus_tag=PKHYL_14080
NZ_AP019516.1	Protein Homology	CDS	1126037	1126801	.	+	0	ID=cds-WP_240366205.1;Parent=gene-PKHYL_RS05930;Dbxref=Genbank:WP_240366205.1;Name=WP_240366205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007484120.1;locus_tag=PKHYL_RS05930;product=hypothetical protein;protein_id=WP_240366205.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1126810	1127028	.	+	.	ID=gene-PKHYL_RS05935;Name=PKHYL_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05935;old_locus_tag=PKHYL_14090
NZ_AP019516.1	GeneMarkS-2+	CDS	1126810	1127028	.	+	0	ID=cds-WP_240366206.1;Parent=gene-PKHYL_RS05935;Dbxref=Genbank:WP_240366206.1;Name=WP_240366206.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05935;product=hypothetical protein;protein_id=WP_240366206.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1127058	1127432	.	+	.	ID=gene-PKHYL_RS05940;Name=PKHYL_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05940;old_locus_tag=PKHYL_14100
NZ_AP019516.1	Protein Homology	CDS	1127058	1127432	.	+	0	ID=cds-WP_240366207.1;Parent=gene-PKHYL_RS05940;Dbxref=Genbank:WP_240366207.1;Name=WP_240366207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005009554.1;locus_tag=PKHYL_RS05940;product=Hint domain-containing protein;protein_id=WP_240366207.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1127413	1127880	.	+	.	ID=gene-PKHYL_RS05945;Name=PKHYL_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05945;old_locus_tag=PKHYL_14110
NZ_AP019516.1	GeneMarkS-2+	CDS	1127413	1127880	.	+	0	ID=cds-WP_240366208.1;Parent=gene-PKHYL_RS05945;Dbxref=Genbank:WP_240366208.1;Name=WP_240366208.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05945;product=hypothetical protein;protein_id=WP_240366208.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1127910	1128152	.	+	.	ID=gene-PKHYL_RS05950;Name=PKHYL_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05950;old_locus_tag=PKHYL_14120
NZ_AP019516.1	GeneMarkS-2+	CDS	1127910	1128152	.	+	0	ID=cds-WP_240366209.1;Parent=gene-PKHYL_RS05950;Dbxref=Genbank:WP_240366209.1;Name=WP_240366209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05950;product=Hint domain-containing protein;protein_id=WP_240366209.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1128130	1128603	.	+	.	ID=gene-PKHYL_RS05955;Name=PKHYL_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05955;old_locus_tag=PKHYL_14130
NZ_AP019516.1	GeneMarkS-2+	CDS	1128130	1128603	.	+	0	ID=cds-WP_240366210.1;Parent=gene-PKHYL_RS05955;Dbxref=Genbank:WP_240366210.1;Name=WP_240366210.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05955;product=hypothetical protein;protein_id=WP_240366210.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1128567	1129786	.	-	.	ID=gene-PKHYL_RS05960;Name=PKHYL_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05960;old_locus_tag=PKHYL_14140
NZ_AP019516.1	Protein Homology	CDS	1129501	1129786	.	-	0	ID=cds-WP_240366211.1;Parent=gene-PKHYL_RS05960;Dbxref=Genbank:WP_240366211.1;Name=WP_240366211.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1;locus_tag=PKHYL_RS05960;product=IS3 family transposase;protein_id=WP_240366211.1;transl_table=11
NZ_AP019516.1	Protein Homology	CDS	1128567	1129501	.	-	2	ID=cds-WP_240366211.1;Parent=gene-PKHYL_RS05960;Dbxref=Genbank:WP_240366211.1;Name=WP_240366211.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1;locus_tag=PKHYL_RS05960;product=IS3 family transposase;protein_id=WP_240366211.1;transl_table=11
NZ_AP019516.1	cmsearch	sequence_feature	1129395	1129511	.	-	.	ID=id-PKHYL_RS05960;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS05960
NZ_AP019516.1	RefSeq	gene	1130264	1130809	.	+	.	ID=gene-PKHYL_RS05965;Name=PKHYL_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05965;old_locus_tag=PKHYL_14170
NZ_AP019516.1	GeneMarkS-2+	CDS	1130264	1130809	.	+	0	ID=cds-WP_240366212.1;Parent=gene-PKHYL_RS05965;Dbxref=Genbank:WP_240366212.1;Name=WP_240366212.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05965;product=hypothetical protein;protein_id=WP_240366212.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1130758	1130958	.	+	.	ID=gene-PKHYL_RS05970;Name=PKHYL_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05970;old_locus_tag=PKHYL_14180
NZ_AP019516.1	GeneMarkS-2+	CDS	1130758	1130958	.	+	0	ID=cds-WP_240366213.1;Parent=gene-PKHYL_RS05970;Dbxref=Genbank:WP_240366213.1;Name=WP_240366213.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05970;product=hypothetical protein;protein_id=WP_240366213.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1131054	1131242	.	-	.	ID=gene-PKHYL_RS05975;Name=PKHYL_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05975;old_locus_tag=PKHYL_14190
NZ_AP019516.1	GeneMarkS-2+	CDS	1131054	1131242	.	-	0	ID=cds-WP_240366214.1;Parent=gene-PKHYL_RS05975;Dbxref=Genbank:WP_240366214.1;Name=WP_240366214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS05975;product=hypothetical protein;protein_id=WP_240366214.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1131330	1131863	.	-	.	ID=gene-PKHYL_RS05980;Name=PKHYL_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05980;old_locus_tag=PKHYL_14200
NZ_AP019516.1	Protein Homology	CDS	1131330	1131863	.	-	0	ID=cds-WP_240366215.1;Parent=gene-PKHYL_RS05980;Dbxref=Genbank:WP_240366215.1;Name=WP_240366215.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=PKHYL_RS05980;product=LysR family transcriptional regulator;protein_id=WP_240366215.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1132249	1133166	.	+	.	ID=gene-PKHYL_RS05985;Name=PKHYL_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05985;old_locus_tag=PKHYL_14210
NZ_AP019516.1	Protein Homology	CDS	1132249	1133166	.	+	0	ID=cds-WP_240366216.1;Parent=gene-PKHYL_RS05985;Dbxref=Genbank:WP_240366216.1;Name=WP_240366216.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: protein motif:HMM:NF014683.2;locus_tag=PKHYL_RS05985;product=L-lactate permease;protein_id=WP_240366216.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1133218	1133733	.	+	.	ID=gene-PKHYL_RS05990;Name=PKHYL_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS05990;old_locus_tag=PKHYL_14220
NZ_AP019516.1	Protein Homology	CDS	1133218	1133733	.	+	0	ID=cds-WP_269778269.1;Parent=gene-PKHYL_RS05990;Dbxref=Genbank:WP_269778269.1;Name=WP_269778269.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: protein motif:HMM:NF014683.2;locus_tag=PKHYL_RS05990;product=L-lactate permease;protein_id=WP_269778269.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1133730	1133903	.	+	.	ID=gene-PKHYL_RS17260;Name=PKHYL_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17260;old_locus_tag=PKHYL_14230
NZ_AP019516.1	Protein Homology	CDS	1133730	1133903	.	+	0	ID=cds-WP_269778270.1;Parent=gene-PKHYL_RS17260;Dbxref=Genbank:WP_269778270.1;Name=WP_269778270.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: protein motif:HMM:NF014683.2;locus_tag=PKHYL_RS17260;product=L-lactate permease;protein_id=WP_269778270.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1133930	1134532	.	+	.	ID=gene-PKHYL_RS17265;Name=PKHYL_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17265;old_locus_tag=PKHYL_14240
NZ_AP019516.1	Protein Homology	CDS	1133930	1134532	.	+	0	ID=cds-WP_269778271.1;Parent=gene-PKHYL_RS17265;Dbxref=Genbank:WP_269778271.1;Name=WP_269778271.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF013714.2;locus_tag=PKHYL_RS17265;product=FAD-binding protein;protein_id=WP_269778271.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1134808	1135615	.	+	.	ID=gene-PKHYL_RS17270;Name=PKHYL_RS17270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17270;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1134808	1135615	.	+	0	ID=cds-PKHYL_RS17270;Parent=gene-PKHYL_RS17270;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020888.2;locus_tag=PKHYL_RS17270;product=hypothetical protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1135715	1136545	.	-	.	ID=gene-PKHYL_RS06000;Name=PKHYL_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06000;old_locus_tag=PKHYL_14290
NZ_AP019516.1	Protein Homology	CDS	1135715	1136545	.	-	0	ID=cds-WP_223335235.1;Parent=gene-PKHYL_RS06000;Dbxref=Genbank:WP_223335235.1;Name=WP_223335235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513160.1;locus_tag=PKHYL_RS06000;product=IclR family transcriptional regulator;protein_id=WP_223335235.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1136750	1137934	.	+	.	ID=gene-PKHYL_RS06005;Name=PKHYL_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06005;old_locus_tag=PKHYL_14300
NZ_AP019516.1	Protein Homology	CDS	1136750	1137934	.	+	0	ID=cds-WP_223335234.1;Parent=gene-PKHYL_RS06005;Dbxref=Genbank:WP_223335234.1;Name=WP_223335234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443096.1;locus_tag=PKHYL_RS06005;product=acyl-CoA dehydrogenase;protein_id=WP_223335234.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1138151	1139368	.	+	.	ID=gene-PKHYL_RS06010;Name=PKHYL_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06010;old_locus_tag=PKHYL_14310
NZ_AP019516.1	Protein Homology	CDS	1138151	1139368	.	+	0	ID=cds-WP_240366217.1;Parent=gene-PKHYL_RS06010;Dbxref=Genbank:WP_240366217.1;Name=WP_240366217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280086.1;locus_tag=PKHYL_RS06010;product=CaiB/BaiF CoA-transferase family protein;protein_id=WP_240366217.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1139471	1139668	.	+	.	ID=gene-PKHYL_RS06015;Name=PKHYL_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06015;old_locus_tag=PKHYL_14320
NZ_AP019516.1	GeneMarkS-2+	CDS	1139471	1139668	.	+	0	ID=cds-WP_240366218.1;Parent=gene-PKHYL_RS06015;Dbxref=Genbank:WP_240366218.1;Name=WP_240366218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06015;product=hypothetical protein;protein_id=WP_240366218.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1139677	1140441	.	-	.	ID=gene-PKHYL_RS06020;Name=PKHYL_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06020;old_locus_tag=PKHYL_14330
NZ_AP019516.1	Protein Homology	CDS	1139677	1140441	.	-	0	ID=cds-WP_071001857.1;Parent=gene-PKHYL_RS06020;Dbxref=Genbank:WP_071001857.1;Name=WP_071001857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198635.1;locus_tag=PKHYL_RS06020;product=IclR family transcriptional regulator;protein_id=WP_071001857.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1140666	1142128	.	+	.	ID=gene-PKHYL_RS06025;Name=PKHYL_RS06025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06025;old_locus_tag=PKHYL_14340;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1140666	1142128	.	+	0	ID=cds-PKHYL_RS06025;Parent=gene-PKHYL_RS06025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659639.1;locus_tag=PKHYL_RS06025;product=NAD-dependent succinate-semialdehyde dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1142305	1143590	.	+	.	ID=gene-PKHYL_RS06030;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=pseudogene;locus_tag=PKHYL_RS06030;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1142305	1143590	.	+	0	ID=cds-PKHYL_RS06030;Parent=gene-PKHYL_RS06030;Note=frameshifted;Ontology_term=GO:0009450,GO:0003867;gbkey=CDS;gene=gabT;go_function=4-aminobutyrate transaminase activity|0003867||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443099.1;locus_tag=PKHYL_RS06030;product=4-aminobutyrate--2-oxoglutarate transaminase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1143865	1144176	.	+	.	ID=gene-PKHYL_RS06035;Name=PKHYL_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06035;old_locus_tag=PKHYL_14390
NZ_AP019516.1	Protein Homology	CDS	1143865	1144176	.	+	0	ID=cds-WP_240366219.1;Parent=gene-PKHYL_RS06035;Dbxref=Genbank:WP_240366219.1;Name=WP_240366219.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF024910.2;locus_tag=PKHYL_RS06035;product=amino acid permease;protein_id=WP_240366219.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1144182	1144697	.	+	.	ID=gene-PKHYL_RS06040;Name=PKHYL_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06040;old_locus_tag=PKHYL_14400
NZ_AP019516.1	GeneMarkS-2+	CDS	1144182	1144697	.	+	0	ID=cds-WP_240366220.1;Parent=gene-PKHYL_RS06040;Dbxref=Genbank:WP_240366220.1;Name=WP_240366220.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06040;product=amino acid permease;protein_id=WP_240366220.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1144676	1145308	.	+	.	ID=gene-PKHYL_RS06045;Name=PKHYL_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06045;old_locus_tag=PKHYL_14410
NZ_AP019516.1	Protein Homology	CDS	1144676	1145308	.	+	0	ID=cds-WP_240366221.1;Parent=gene-PKHYL_RS06045;Dbxref=Genbank:WP_240366221.1;Name=WP_240366221.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024910.2;locus_tag=PKHYL_RS06045;product=APC family permease;protein_id=WP_240366221.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1145397	1146770	.	-	.	ID=gene-PKHYL_RS06050;Name=PKHYL_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06050;old_locus_tag=PKHYL_14420
NZ_AP019516.1	Protein Homology	CDS	1145397	1146770	.	-	0	ID=cds-WP_071001853.1;Parent=gene-PKHYL_RS06050;Dbxref=Genbank:WP_071001853.1;Name=WP_071001853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198655.1;locus_tag=PKHYL_RS06050;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_071001853.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1146703	1147080	.	-	.	ID=gene-PKHYL_RS06055;Name=PKHYL_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06055
NZ_AP019516.1	Protein Homology	CDS	1146703	1147080	.	-	0	ID=cds-WP_083328835.1;Parent=gene-PKHYL_RS06055;Dbxref=Genbank:WP_083328835.1;Name=WP_083328835.1;Ontology_term=GO:0009446,GO:0004668;gbkey=CDS;go_function=protein-arginine deiminase activity|0004668||IEA;go_process=putrescine biosynthetic process|0009446||IEA;inference=COORDINATES: protein motif:HMM:NF016274.2;locus_tag=PKHYL_RS06055;product=agmatine deiminase family protein;protein_id=WP_083328835.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1147148	1148525	.	-	.	ID=gene-PKHYL_RS06060;Name=PKHYL_RS06060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06060;old_locus_tag=PKHYL_14430;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1147148	1148525	.	-	0	ID=cds-PKHYL_RS06060;Parent=gene-PKHYL_RS06060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513170.1;locus_tag=PKHYL_RS06060;product=glycosyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1148680	1148889	.	-	.	ID=gene-PKHYL_RS06065;Name=PKHYL_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06065
NZ_AP019516.1	Protein Homology	CDS	1148680	1148889	.	-	0	ID=cds-WP_240366222.1;Parent=gene-PKHYL_RS06065;Dbxref=Genbank:WP_240366222.1;Name=WP_240366222.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024955.2;locus_tag=PKHYL_RS06065;product=DUF4130 domain-containing protein;protein_id=WP_240366222.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1148846	1149553	.	-	.	ID=gene-PKHYL_RS06070;Name=PKHYL_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06070;old_locus_tag=PKHYL_14450
NZ_AP019516.1	Protein Homology	CDS	1148846	1149553	.	-	0	ID=cds-WP_240366223.1;Parent=gene-PKHYL_RS06070;Dbxref=Genbank:WP_240366223.1;Name=WP_240366223.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: protein motif:HMM:TIGR03915.1;locus_tag=PKHYL_RS06070;product=TIGR03915 family putative DNA repair protein;protein_id=WP_240366223.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1149873	1151142	.	-	.	ID=gene-PKHYL_RS06075;Name=PKHYL_RS06075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06075;old_locus_tag=PKHYL_14460;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1149873	1151142	.	-	0	ID=cds-PKHYL_RS06075;Parent=gene-PKHYL_RS06075;Note=frameshifted;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443111.1;locus_tag=PKHYL_RS06075;product=putative DNA modification/repair radical SAM protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1151380	1152282	.	-	.	ID=gene-PKHYL_RS06080;Name=PKHYL_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06080;old_locus_tag=PKHYL_14470
NZ_AP019516.1	Protein Homology	CDS	1151380	1152282	.	-	0	ID=cds-WP_071001850.1;Parent=gene-PKHYL_RS06080;Dbxref=Genbank:WP_071001850.1;Name=WP_071001850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198673.1;locus_tag=PKHYL_RS06080;product=hypothetical protein;protein_id=WP_071001850.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1152785	1153261	.	-	.	ID=gene-PKHYL_RS06085;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=PKHYL_RS06085;old_locus_tag=PKHYL_14480
NZ_AP019516.1	Protein Homology	CDS	1152785	1153261	.	-	0	ID=cds-WP_071001849.1;Parent=gene-PKHYL_RS06085;Dbxref=Genbank:WP_071001849.1;Name=WP_071001849.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198674.1;locus_tag=PKHYL_RS06085;product=transcription elongation factor GreA;protein_id=WP_071001849.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1153587	1156848	.	-	.	ID=gene-PKHYL_RS06090;Name=carB;gbkey=Gene;gene=carB;gene_biotype=pseudogene;locus_tag=PKHYL_RS06090;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1153587	1156848	.	-	0	ID=cds-PKHYL_RS06090;Parent=gene-PKHYL_RS06090;Note=frameshifted;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198677.1;locus_tag=PKHYL_RS06090;product=carbamoyl-phosphate synthase large subunit;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1157001	1158242	.	-	.	ID=gene-PKHYL_RS06095;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=PKHYL_RS06095;old_locus_tag=PKHYL_14520
NZ_AP019516.1	Protein Homology	CDS	1157001	1158242	.	-	0	ID=cds-WP_071001847.1;Parent=gene-PKHYL_RS06095;Dbxref=Genbank:WP_071001847.1;Name=WP_071001847.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198682.1;locus_tag=PKHYL_RS06095;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_071001847.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1158527	1158781	.	-	.	ID=gene-PKHYL_RS06100;Name=PKHYL_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06100;old_locus_tag=PKHYL_14530
NZ_AP019516.1	Protein Homology	CDS	1158527	1158781	.	-	0	ID=cds-WP_240366224.1;Parent=gene-PKHYL_RS06100;Dbxref=Genbank:WP_240366224.1;Name=WP_240366224.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013718.2;locus_tag=PKHYL_RS06100;product=hypothetical protein;protein_id=WP_240366224.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1158750	1159079	.	-	.	ID=gene-PKHYL_RS06105;Name=PKHYL_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06105;old_locus_tag=PKHYL_14540
NZ_AP019516.1	GeneMarkS-2+	CDS	1158750	1159079	.	-	0	ID=cds-WP_240366225.1;Parent=gene-PKHYL_RS06105;Dbxref=Genbank:WP_240366225.1;Name=WP_240366225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06105;product=hypothetical protein;protein_id=WP_240366225.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1159351	1159887	.	+	.	ID=gene-PKHYL_RS06110;Name=PKHYL_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06110;old_locus_tag=PKHYL_14550
NZ_AP019516.1	Protein Homology	CDS	1159351	1159887	.	+	0	ID=cds-WP_071001845.1;Parent=gene-PKHYL_RS06110;Dbxref=Genbank:WP_071001845.1;Name=WP_071001845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443115.1;locus_tag=PKHYL_RS06110;product=gamma carbonic anhydrase family protein;protein_id=WP_071001845.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1160123	1160823	.	+	.	ID=gene-PKHYL_RS06115;Name=PKHYL_RS06115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06115;old_locus_tag=PKHYL_14560;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1160123	1160823	.	+	0	ID=cds-PKHYL_RS06115;Parent=gene-PKHYL_RS06115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198688.1;locus_tag=PKHYL_RS06115;product=HAD-IB family hydrolase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1160939	1162032	.	+	.	ID=gene-PKHYL_RS06120;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=pseudogene;locus_tag=PKHYL_RS06120;old_locus_tag=PKHYL_14570;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1160939	1162032	.	+	0	ID=cds-PKHYL_RS06120;Parent=gene-PKHYL_RS06120;Note=frameshifted;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_131667308.1;locus_tag=PKHYL_RS06120;product=peptide chain release factor 2;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1162075	1162359	.	+	.	ID=gene-PKHYL_RS06125;Name=PKHYL_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06125;old_locus_tag=PKHYL_14580
NZ_AP019516.1	Protein Homology	CDS	1162075	1162359	.	+	0	ID=cds-WP_071001842.1;Parent=gene-PKHYL_RS06125;Dbxref=Genbank:WP_071001842.1;Name=WP_071001842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513181.1;locus_tag=PKHYL_RS06125;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_071001842.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1162672	1163301	.	+	.	ID=gene-PKHYL_RS17275;Name=PKHYL_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17275;old_locus_tag=PKHYL_14590
NZ_AP019516.1	Protein Homology	CDS	1162672	1163301	.	+	0	ID=cds-WP_269778272.1;Parent=gene-PKHYL_RS17275;Dbxref=Genbank:WP_269778272.1;Name=WP_269778272.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013215.2;locus_tag=PKHYL_RS17275;product=hypothetical protein;protein_id=WP_269778272.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1163298	1163699	.	+	.	ID=gene-PKHYL_RS17280;Name=PKHYL_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17280;old_locus_tag=PKHYL_14600
NZ_AP019516.1	Protein Homology	CDS	1163298	1163699	.	+	0	ID=cds-WP_269778273.1;Parent=gene-PKHYL_RS17280;Dbxref=Genbank:WP_269778273.1;Name=WP_269778273.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013215.2;locus_tag=PKHYL_RS17280;product=hypothetical protein;protein_id=WP_269778273.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1164058	1165760	.	+	.	ID=gene-PKHYL_RS06135;Name=PKHYL_RS06135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06135;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1164058	1165760	.	+	0	ID=cds-PKHYL_RS06135;Parent=gene-PKHYL_RS06135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280101.1;locus_tag=PKHYL_RS06135;product=AMP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1165856	1166290	.	+	.	ID=gene-PKHYL_RS17285;Name=PKHYL_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17285;old_locus_tag=PKHYL_14640
NZ_AP019516.1	Protein Homology	CDS	1165856	1166290	.	+	0	ID=cds-WP_269778274.1;Parent=gene-PKHYL_RS17285;Dbxref=Genbank:WP_269778274.1;Name=WP_269778274.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012334.2;locus_tag=PKHYL_RS17285;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_269778274.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1166320	1166637	.	+	.	ID=gene-PKHYL_RS17290;Name=PKHYL_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17290;old_locus_tag=PKHYL_14650
NZ_AP019516.1	Protein Homology	CDS	1166320	1166637	.	+	0	ID=cds-WP_269778313.1;Parent=gene-PKHYL_RS17290;Dbxref=Genbank:WP_269778313.1;Name=WP_269778313.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=PKHYL_RS17290;product=SDR family oxidoreductase;protein_id=WP_269778313.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1167123	1167275	.	+	.	ID=gene-PKHYL_RS06145;Name=PKHYL_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06145;old_locus_tag=PKHYL_14670
NZ_AP019516.1	GeneMarkS-2+	CDS	1167123	1167275	.	+	0	ID=cds-WP_240366226.1;Parent=gene-PKHYL_RS06145;Dbxref=Genbank:WP_240366226.1;Name=WP_240366226.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06145;product=hypothetical protein;protein_id=WP_240366226.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1167582	1170175	.	+	.	ID=gene-PKHYL_RS06150;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=pseudogene;locus_tag=PKHYL_RS06150;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1167582	1170175	.	+	0	ID=cds-PKHYL_RS06150;Parent=gene-PKHYL_RS06150;Note=frameshifted;Ontology_term=GO:0006457,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001210049.1;locus_tag=PKHYL_RS06150;product=ATP-dependent chaperone ClpB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1170384	1170737	.	+	.	ID=gene-PKHYL_RS06155;Name=PKHYL_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06155
NZ_AP019516.1	GeneMarkS-2+	CDS	1170384	1170737	.	+	0	ID=cds-WP_240366227.1;Parent=gene-PKHYL_RS06155;Dbxref=Genbank:WP_240366227.1;Name=WP_240366227.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06155;product=hypothetical protein;protein_id=WP_240366227.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1170757	1171667	.	+	.	ID=gene-PKHYL_RS06160;Name=PKHYL_RS06160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06160;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1170757	1171667	.	+	0	ID=cds-PKHYL_RS06160;Parent=gene-PKHYL_RS06160;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019607.2;locus_tag=PKHYL_RS06160;product=PQQ-dependent sugar dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1171868	1173511	.	+	.	ID=gene-PKHYL_RS06165;Name=PKHYL_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06165;old_locus_tag=PKHYL_14740
NZ_AP019516.1	Protein Homology	CDS	1171868	1173511	.	+	0	ID=cds-WP_240366228.1;Parent=gene-PKHYL_RS06165;Dbxref=Genbank:WP_240366228.1;Name=WP_240366228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443126.1;locus_tag=PKHYL_RS06165;product=BCCT family transporter;protein_id=WP_240366228.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1174179	1174537	.	-	.	ID=gene-PKHYL_RS06170;Name=PKHYL_RS06170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06170;old_locus_tag=PKHYL_14750;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1174179	1174537	.	-	0	ID=cds-PKHYL_RS06170;Parent=gene-PKHYL_RS06170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513191.1;locus_tag=PKHYL_RS06170;product=DUF3144 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1174621	1175786	.	-	.	ID=gene-PKHYL_RS06175;Name=metK;gbkey=Gene;gene=metK;gene_biotype=pseudogene;locus_tag=PKHYL_RS06175;old_locus_tag=PKHYL_14770;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1174621	1175786	.	-	0	ID=cds-PKHYL_RS06175;Parent=gene-PKHYL_RS06175;Note=frameshifted;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020753076.1;locus_tag=PKHYL_RS06175;product=methionine adenosyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1176273	1176959	.	-	.	ID=gene-PKHYL_RS06180;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=PKHYL_RS06180;old_locus_tag=PKHYL_14780
NZ_AP019516.1	Protein Homology	CDS	1176273	1176959	.	-	0	ID=cds-WP_240366229.1;Parent=gene-PKHYL_RS06180;Dbxref=Genbank:WP_240366229.1;Name=WP_240366229.1;Ontology_term=GO:0006281,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520736.1;locus_tag=PKHYL_RS06180;product=endonuclease III;protein_id=WP_240366229.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1177051	1177905	.	-	.	ID=gene-PKHYL_RS06185;Name=PKHYL_RS06185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06185;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1177051	1177905	.	-	0	ID=cds-PKHYL_RS06185;Parent=gene-PKHYL_RS06185;Note=frameshifted;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280110.1;locus_tag=PKHYL_RS06185;product=RnfABCDGE type electron transport complex subunit B;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1178210	1178356	.	-	.	ID=gene-PKHYL_RS06190;Name=PKHYL_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06190
NZ_AP019516.1	Protein Homology	CDS	1178210	1178356	.	-	0	ID=cds-WP_240366230.1;Parent=gene-PKHYL_RS06190;Dbxref=Genbank:WP_240366230.1;Name=WP_240366230.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=PKHYL_RS06190;product=hypothetical protein;protein_id=WP_240366230.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1178386	1178718	.	-	.	ID=gene-PKHYL_RS06195;Name=PKHYL_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06195;old_locus_tag=PKHYL_14810
NZ_AP019516.1	Protein Homology	CDS	1178386	1178718	.	-	0	ID=cds-WP_240366231.1;Parent=gene-PKHYL_RS06195;Dbxref=Genbank:WP_240366231.1;Name=WP_240366231.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=PKHYL_RS06195;product=LysR substrate-binding domain-containing protein;protein_id=WP_240366231.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1178746	1179099	.	-	.	ID=gene-PKHYL_RS06200;Name=PKHYL_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06200;old_locus_tag=PKHYL_14820
NZ_AP019516.1	Protein Homology	CDS	1178746	1179099	.	-	0	ID=cds-WP_240366232.1;Parent=gene-PKHYL_RS06200;Dbxref=Genbank:WP_240366232.1;Name=WP_240366232.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012354.2;locus_tag=PKHYL_RS06200;product=LysR family transcriptional regulator;protein_id=WP_240366232.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1179192	1180121	.	+	.	ID=gene-PKHYL_RS06205;Name=PKHYL_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06205;old_locus_tag=PKHYL_14830
NZ_AP019516.1	Protein Homology	CDS	1179192	1180121	.	+	0	ID=cds-WP_071001830.1;Parent=gene-PKHYL_RS06205;Dbxref=Genbank:WP_071001830.1;Name=WP_071001830.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013088.2;locus_tag=PKHYL_RS06205;product=DMT family transporter;protein_id=WP_071001830.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1180187	1180459	.	-	.	ID=gene-PKHYL_RS06210;Name=PKHYL_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06210;old_locus_tag=PKHYL_14840
NZ_AP019516.1	GeneMarkS-2+	CDS	1180187	1180459	.	-	0	ID=cds-WP_240366233.1;Parent=gene-PKHYL_RS06210;Dbxref=Genbank:WP_240366233.1;Name=WP_240366233.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06210;product=hypothetical protein;protein_id=WP_240366233.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1180490	1181131	.	-	.	ID=gene-PKHYL_RS06215;Name=PKHYL_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06215;old_locus_tag=PKHYL_14850
NZ_AP019516.1	Protein Homology	CDS	1180490	1181131	.	-	0	ID=cds-WP_240366234.1;Parent=gene-PKHYL_RS06215;Dbxref=Genbank:WP_240366234.1;Name=WP_240366234.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020857.2;locus_tag=PKHYL_RS06215;product=hypothetical protein;protein_id=WP_240366234.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1181263	1182312	.	-	.	ID=gene-PKHYL_RS06220;Name=PKHYL_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06220;old_locus_tag=PKHYL_14860
NZ_AP019516.1	GeneMarkS-2+	CDS	1181263	1182312	.	-	0	ID=cds-WP_240366235.1;Parent=gene-PKHYL_RS06220;Dbxref=Genbank:WP_240366235.1;Name=WP_240366235.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06220;product=hypothetical protein;protein_id=WP_240366235.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1182383	1182946	.	-	.	ID=gene-PKHYL_RS06225;Name=PKHYL_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06225;old_locus_tag=PKHYL_14870
NZ_AP019516.1	GeneMarkS-2+	CDS	1182383	1182946	.	-	0	ID=cds-WP_240366236.1;Parent=gene-PKHYL_RS06225;Dbxref=Genbank:WP_240366236.1;Name=WP_240366236.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06225;product=hypothetical protein;protein_id=WP_240366236.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1183095	1184734	.	-	.	ID=gene-PKHYL_RS06230;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=pseudogene;locus_tag=PKHYL_RS06230;old_locus_tag=PKHYL_14880;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1183095	1184734	.	-	0	ID=cds-PKHYL_RS06230;Parent=gene-PKHYL_RS06230;Note=frameshifted;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443134.1;locus_tag=PKHYL_RS06230;product=DNA polymerase III subunit epsilon;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1185191	1185664	.	+	.	ID=gene-PKHYL_RS06235;Name=PKHYL_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06235;old_locus_tag=PKHYL_14900
NZ_AP019516.1	Protein Homology	CDS	1185191	1185664	.	+	0	ID=cds-WP_240366237.1;Parent=gene-PKHYL_RS06235;Dbxref=Genbank:WP_240366237.1;Name=WP_240366237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673100.1;locus_tag=PKHYL_RS06235;product=hypothetical protein;protein_id=WP_240366237.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1185714	1185977	.	+	.	ID=gene-PKHYL_RS06240;Name=PKHYL_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06240;old_locus_tag=PKHYL_14910
NZ_AP019516.1	GeneMarkS-2+	CDS	1185714	1185977	.	+	0	ID=cds-WP_240366238.1;Parent=gene-PKHYL_RS06240;Dbxref=Genbank:WP_240366238.1;Name=WP_240366238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06240;product=hypothetical protein;protein_id=WP_240366238.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1186194	1186673	.	-	.	ID=gene-PKHYL_RS06245;Name=PKHYL_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06245;old_locus_tag=PKHYL_14920
NZ_AP019516.1	Protein Homology	CDS	1186194	1186673	.	-	0	ID=cds-WP_240366239.1;Parent=gene-PKHYL_RS06245;Dbxref=Genbank:WP_240366239.1;Name=WP_240366239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280116.1;locus_tag=PKHYL_RS06245;product=DUF1232 domain-containing protein;protein_id=WP_240366239.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1186943	1188189	.	+	.	ID=gene-PKHYL_RS06250;Name=PKHYL_RS06250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06250;old_locus_tag=PKHYL_14930;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1186943	1188189	.	+	0	ID=cds-PKHYL_RS06250;Parent=gene-PKHYL_RS06250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280117.1;locus_tag=PKHYL_RS06250;product=LD-carboxypeptidase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1188217	1189224	.	-	.	ID=gene-PKHYL_RS06255;Name=PKHYL_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06255;old_locus_tag=PKHYL_14940
NZ_AP019516.1	Protein Homology	CDS	1188217	1189224	.	-	0	ID=cds-WP_240366240.1;Parent=gene-PKHYL_RS06255;Dbxref=Genbank:WP_240366240.1;Name=WP_240366240.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513202.1;locus_tag=PKHYL_RS06255;product=helix-turn-helix domain-containing protein;protein_id=WP_240366240.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1189508	1191312	.	+	.	ID=gene-PKHYL_RS06260;Name=PKHYL_RS06260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06260;old_locus_tag=PKHYL_14960;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1189508	1191312	.	+	0	ID=cds-PKHYL_RS06260;Parent=gene-PKHYL_RS06260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443139.1;locus_tag=PKHYL_RS06260;product=acyl-CoA dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1191335	1192171	.	+	.	ID=gene-PKHYL_RS06265;Name=PKHYL_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06265;old_locus_tag=PKHYL_14970
NZ_AP019516.1	Protein Homology	CDS	1191335	1192171	.	+	0	ID=cds-WP_240366241.1;Parent=gene-PKHYL_RS06265;Dbxref=Genbank:WP_240366241.1;Name=WP_240366241.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028194.2;locus_tag=PKHYL_RS06265;product=NADP-dependent oxidoreductase;protein_id=WP_240366241.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1192348	1193130	.	+	.	ID=gene-PKHYL_RS06270;Name=PKHYL_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06270;old_locus_tag=PKHYL_14990
NZ_AP019516.1	Protein Homology	CDS	1192348	1193130	.	+	0	ID=cds-WP_093068272.1;Parent=gene-PKHYL_RS06270;Dbxref=Genbank:WP_093068272.1;Name=WP_093068272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443141.1;locus_tag=PKHYL_RS06270;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_093068272.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1193174	1193938	.	+	.	ID=gene-PKHYL_RS06275;Name=PKHYL_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06275;old_locus_tag=PKHYL_15000
NZ_AP019516.1	Protein Homology	CDS	1193174	1193938	.	+	0	ID=cds-WP_223335268.1;Parent=gene-PKHYL_RS06275;Dbxref=Genbank:WP_223335268.1;Name=WP_223335268.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443142.1;locus_tag=PKHYL_RS06275;product=SDR family oxidoreductase;protein_id=WP_223335268.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1194144	1195079	.	+	.	ID=gene-PKHYL_RS06280;Name=PKHYL_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06280;old_locus_tag=PKHYL_15010
NZ_AP019516.1	Protein Homology	CDS	1194144	1195079	.	+	0	ID=cds-WP_240366242.1;Parent=gene-PKHYL_RS06280;Dbxref=Genbank:WP_240366242.1;Name=WP_240366242.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015297.2;locus_tag=PKHYL_RS06280;product=CoA ester lyase;protein_id=WP_240366242.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1195076	1195489	.	+	.	ID=gene-PKHYL_RS06285;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=PKHYL_RS06285;old_locus_tag=PKHYL_15020
NZ_AP019516.1	Protein Homology	CDS	1195076	1195489	.	+	0	ID=cds-WP_071001818.1;Parent=gene-PKHYL_RS06285;Dbxref=Genbank:WP_071001818.1;Name=WP_071001818.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198548.1;locus_tag=PKHYL_RS06285;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_071001818.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1195641	1195988	.	-	.	ID=gene-PKHYL_RS17295;Name=PKHYL_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17295;old_locus_tag=PKHYL_15030
NZ_AP019516.1	Protein Homology	CDS	1195641	1195988	.	-	0	ID=cds-WP_269778275.1;Parent=gene-PKHYL_RS17295;Dbxref=Genbank:WP_269778275.1;Name=WP_269778275.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015737.2;locus_tag=PKHYL_RS17295;product=autotransporter domain-containing protein;protein_id=WP_269778275.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1195904	1196602	.	-	.	ID=gene-PKHYL_RS17300;Name=PKHYL_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17300
NZ_AP019516.1	Protein Homology	CDS	1195904	1196602	.	-	0	ID=cds-WP_269778314.1;Parent=gene-PKHYL_RS17300;Dbxref=Genbank:WP_269778314.1;Name=WP_269778314.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015737.2;locus_tag=PKHYL_RS17300;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_269778314.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1196648	1197331	.	-	.	ID=gene-PKHYL_RS17305;Name=PKHYL_RS17305;end_range=1197331,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17305;partial=true;pseudo=true;start_range=.,1196648
NZ_AP019516.1	Protein Homology	CDS	1196648	1197331	.	-	0	ID=cds-PKHYL_RS17305;Parent=gene-PKHYL_RS17305;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016788;end_range=1197331,.;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: protein motif:HMM:NF012863.2;locus_tag=PKHYL_RS17305;partial=true;product=SGNH/GDSL hydrolase family protein;pseudo=true;start_range=.,1196648;transl_table=11
NZ_AP019516.1	RefSeq	gene	1197859	1199058	.	-	.	ID=gene-PKHYL_RS06295;Name=PKHYL_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06295;old_locus_tag=PKHYL_15050
NZ_AP019516.1	Protein Homology	CDS	1197859	1199058	.	-	0	ID=cds-WP_071001816.1;Parent=gene-PKHYL_RS06295;Dbxref=Genbank:WP_071001816.1;Name=WP_071001816.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513210.1;locus_tag=PKHYL_RS06295;product=sugar transporter;protein_id=WP_071001816.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1200125	1200601	.	+	.	ID=gene-PKHYL_RS06300;Name=PKHYL_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06300;old_locus_tag=PKHYL_15060
NZ_AP019516.1	GeneMarkS-2+	CDS	1200125	1200601	.	+	0	ID=cds-WP_240366243.1;Parent=gene-PKHYL_RS06300;Dbxref=Genbank:WP_240366243.1;Name=WP_240366243.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06300;product=hypothetical protein;protein_id=WP_240366243.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1200606	1200794	.	+	.	ID=gene-PKHYL_RS06305;Name=PKHYL_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06305;old_locus_tag=PKHYL_15070
NZ_AP019516.1	GeneMarkS-2+	CDS	1200606	1200794	.	+	0	ID=cds-WP_240366244.1;Parent=gene-PKHYL_RS06305;Dbxref=Genbank:WP_240366244.1;Name=WP_240366244.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06305;product=hypothetical protein;protein_id=WP_240366244.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1200902	1201291	.	+	.	ID=gene-PKHYL_RS06310;Name=PKHYL_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06310;old_locus_tag=PKHYL_15080
NZ_AP019516.1	Protein Homology	CDS	1200902	1201291	.	+	0	ID=cds-WP_240365635.1-3;Parent=gene-PKHYL_RS06310;Dbxref=Genbank:WP_240365635.1;Name=WP_240365635.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024908.2;locus_tag=PKHYL_RS06310;product=transposase;protein_id=WP_240365635.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1201363	1202250	.	+	.	ID=gene-PKHYL_RS06315;Name=PKHYL_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06315;old_locus_tag=PKHYL_15090
NZ_AP019516.1	Protein Homology	CDS	1201363	1202250	.	+	0	ID=cds-WP_240365636.1-2;Parent=gene-PKHYL_RS06315;Dbxref=Genbank:WP_240365636.1;Name=WP_240365636.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=PKHYL_RS06315;product=IS3 family transposase;protein_id=WP_240365636.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1202252	1202962	.	-	.	ID=gene-PKHYL_RS06320;Name=PKHYL_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06320;old_locus_tag=PKHYL_15100
NZ_AP019516.1	Protein Homology	CDS	1202252	1202962	.	-	0	ID=cds-WP_083328831.1;Parent=gene-PKHYL_RS06320;Dbxref=Genbank:WP_083328831.1;Name=WP_083328831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198592.1;locus_tag=PKHYL_RS06320;product=TetR/AcrR family transcriptional regulator;protein_id=WP_083328831.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1203236	1204387	.	+	.	ID=gene-PKHYL_RS06325;Name=PKHYL_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06325;old_locus_tag=PKHYL_15110
NZ_AP019516.1	Protein Homology	CDS	1203236	1204387	.	+	0	ID=cds-WP_102090554.1;Parent=gene-PKHYL_RS06325;Dbxref=Genbank:WP_102090554.1;Name=WP_102090554.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960443.1;locus_tag=PKHYL_RS06325;product=acyl-CoA dehydrogenase family protein;protein_id=WP_102090554.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1204450	1205659	.	+	.	ID=gene-PKHYL_RS06330;Name=PKHYL_RS06330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06330;old_locus_tag=PKHYL_15130;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1204450	1205659	.	+	0	ID=cds-PKHYL_RS06330;Parent=gene-PKHYL_RS06330;Note=frameshifted;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019457521.1;locus_tag=PKHYL_RS06330;product=acetyl-CoA C-acetyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1205732	1206061	.	+	.	ID=gene-PKHYL_RS06335;Name=PKHYL_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06335;old_locus_tag=PKHYL_15140
NZ_AP019516.1	GeneMarkS-2+	CDS	1205732	1206061	.	+	0	ID=cds-WP_240366245.1;Parent=gene-PKHYL_RS06335;Dbxref=Genbank:WP_240366245.1;Name=WP_240366245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06335;product=hypothetical protein;protein_id=WP_240366245.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1206048	1206560	.	+	.	ID=gene-PKHYL_RS06340;Name=PKHYL_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06340;old_locus_tag=PKHYL_15150
NZ_AP019516.1	Protein Homology	CDS	1206048	1206560	.	+	0	ID=cds-WP_240366246.1;Parent=gene-PKHYL_RS06340;Dbxref=Genbank:WP_240366246.1;Name=WP_240366246.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF012596.2;locus_tag=PKHYL_RS06340;product=enoyl-CoA hydratase-related protein;protein_id=WP_240366246.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1206560	1206733	.	+	.	ID=gene-PKHYL_RS06345;Name=PKHYL_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06345;old_locus_tag=PKHYL_15160
NZ_AP019516.1	GeneMarkS-2+	CDS	1206560	1206733	.	+	0	ID=cds-WP_240366247.1;Parent=gene-PKHYL_RS06345;Dbxref=Genbank:WP_240366247.1;Name=WP_240366247.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06345;product=hypothetical protein;protein_id=WP_240366247.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1206742	1207560	.	+	.	ID=gene-PKHYL_RS06350;Name=PKHYL_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06350;old_locus_tag=PKHYL_15170
NZ_AP019516.1	Protein Homology	CDS	1206742	1207560	.	+	0	ID=cds-WP_240366248.1;Parent=gene-PKHYL_RS06350;Dbxref=Genbank:WP_240366248.1;Name=WP_240366248.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014757.2;locus_tag=PKHYL_RS06350;product=3-hydroxyacyl-CoA dehydrogenase family protein;protein_id=WP_240366248.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1207514	1207921	.	+	.	ID=gene-PKHYL_RS06355;Name=PKHYL_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06355;old_locus_tag=PKHYL_15180
NZ_AP019516.1	GeneMarkS-2+	CDS	1207514	1207921	.	+	0	ID=cds-WP_240366249.1;Parent=gene-PKHYL_RS06355;Dbxref=Genbank:WP_240366249.1;Name=WP_240366249.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06355;product=hypothetical protein;protein_id=WP_240366249.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1207914	1208372	.	+	.	ID=gene-PKHYL_RS17310;Name=PKHYL_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17310;old_locus_tag=PKHYL_15190
NZ_AP019516.1	Protein Homology	CDS	1207914	1208372	.	+	0	ID=cds-WP_269778276.1;Parent=gene-PKHYL_RS17310;Dbxref=Genbank:WP_269778276.1;Name=WP_269778276.1;Ontology_term=GO:0008410;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: protein motif:HMM:NF014564.2;locus_tag=PKHYL_RS17310;product=CoA transferase;protein_id=WP_269778276.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1208414	1208845	.	+	.	ID=gene-PKHYL_RS17315;Name=PKHYL_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17315;old_locus_tag=PKHYL_15200
NZ_AP019516.1	Protein Homology	CDS	1208414	1208845	.	+	0	ID=cds-WP_269778277.1;Parent=gene-PKHYL_RS17315;Dbxref=Genbank:WP_269778277.1;Name=WP_269778277.1;Ontology_term=GO:0008410;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: protein motif:HMM:NF014564.2;locus_tag=PKHYL_RS17315;product=CoA transferase;protein_id=WP_269778277.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1208817	1209077	.	+	.	ID=gene-PKHYL_RS17320;Name=PKHYL_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17320;old_locus_tag=PKHYL_15210
NZ_AP019516.1	Protein Homology	CDS	1208817	1209077	.	+	0	ID=cds-WP_269778278.1;Parent=gene-PKHYL_RS17320;Dbxref=Genbank:WP_269778278.1;Name=WP_269778278.1;Ontology_term=GO:0008410;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: protein motif:HMM:NF014564.2;locus_tag=PKHYL_RS17320;product=CoA transferase;protein_id=WP_269778278.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1209305	1209469	.	+	.	ID=gene-PKHYL_RS06365;Name=PKHYL_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06365;old_locus_tag=PKHYL_15220
NZ_AP019516.1	GeneMarkS-2+	CDS	1209305	1209469	.	+	0	ID=cds-WP_240366250.1;Parent=gene-PKHYL_RS06365;Dbxref=Genbank:WP_240366250.1;Name=WP_240366250.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06365;product=hypothetical protein;protein_id=WP_240366250.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1209457	1209822	.	+	.	ID=gene-PKHYL_RS06370;Name=PKHYL_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06370;old_locus_tag=PKHYL_15230
NZ_AP019516.1	GeneMarkS-2+	CDS	1209457	1209822	.	+	0	ID=cds-WP_240366251.1;Parent=gene-PKHYL_RS06370;Dbxref=Genbank:WP_240366251.1;Name=WP_240366251.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06370;product=hypothetical protein;protein_id=WP_240366251.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1209833	1210009	.	+	.	ID=gene-PKHYL_RS06375;Name=PKHYL_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06375;old_locus_tag=PKHYL_15240
NZ_AP019516.1	GeneMarkS-2+	CDS	1209833	1210009	.	+	0	ID=cds-WP_240366252.1;Parent=gene-PKHYL_RS06375;Dbxref=Genbank:WP_240366252.1;Name=WP_240366252.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06375;product=hypothetical protein;protein_id=WP_240366252.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1210138	1210512	.	+	.	ID=gene-PKHYL_RS06380;Name=PKHYL_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06380;old_locus_tag=PKHYL_15250
NZ_AP019516.1	Protein Homology	CDS	1210138	1210512	.	+	0	ID=cds-WP_240366253.1;Parent=gene-PKHYL_RS06380;Dbxref=Genbank:WP_240366253.1;Name=WP_240366253.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022072.2;locus_tag=PKHYL_RS06380;product=SRPBCC family protein;protein_id=WP_240366253.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1210654	1210965	.	-	.	ID=gene-PKHYL_RS06385;Name=PKHYL_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06385;old_locus_tag=PKHYL_15260
NZ_AP019516.1	Protein Homology	CDS	1210654	1210965	.	-	0	ID=cds-WP_071001807.1;Parent=gene-PKHYL_RS06385;Dbxref=Genbank:WP_071001807.1;Name=WP_071001807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199695.1;locus_tag=PKHYL_RS06385;product=DUF1244 domain-containing protein;protein_id=WP_071001807.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1211311	1211383	.	-	.	ID=gene-PKHYL_RS06390;Name=PKHYL_RS06390;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS06390;old_locus_tag=PKHYL_t00230
NZ_AP019516.1	tRNAscan-SE	tRNA	1211311	1211383	.	-	.	ID=rna-PKHYL_RS06390;Parent=gene-PKHYL_RS06390;anticodon=(pos:complement(1211349..1211351));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS06390;product=tRNA-Gly
NZ_AP019516.1	tRNAscan-SE	exon	1211311	1211383	.	-	.	ID=exon-PKHYL_RS06390-1;Parent=rna-PKHYL_RS06390;anticodon=(pos:complement(1211349..1211351));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS06390;product=tRNA-Gly
NZ_AP019516.1	RefSeq	gene	1211641	1212570	.	+	.	ID=gene-PKHYL_RS06395;Name=PKHYL_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06395;old_locus_tag=PKHYL_15270
NZ_AP019516.1	Protein Homology	CDS	1211641	1212570	.	+	0	ID=cds-WP_240366254.1;Parent=gene-PKHYL_RS06395;Dbxref=Genbank:WP_240366254.1;Name=WP_240366254.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: protein motif:HMM:NF014795.2;locus_tag=PKHYL_RS06395;product=thiamine pyrophosphate-binding protein;protein_id=WP_240366254.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1212560	1212769	.	+	.	ID=gene-PKHYL_RS06400;Name=PKHYL_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06400;old_locus_tag=PKHYL_15280
NZ_AP019516.1	GeneMarkS-2+	CDS	1212560	1212769	.	+	0	ID=cds-WP_240366255.1;Parent=gene-PKHYL_RS06400;Dbxref=Genbank:WP_240366255.1;Name=WP_240366255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06400;product=hypothetical protein;protein_id=WP_240366255.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1212878	1213270	.	+	.	ID=gene-PKHYL_RS06405;Name=PKHYL_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06405;old_locus_tag=PKHYL_15290
NZ_AP019516.1	Protein Homology	CDS	1212878	1213270	.	+	0	ID=cds-WP_240366256.1;Parent=gene-PKHYL_RS06405;Dbxref=Genbank:WP_240366256.1;Name=WP_240366256.1;Ontology_term=GO:0003824,GO:0030976;gbkey=CDS;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: protein motif:HMM:NF014794.2;locus_tag=PKHYL_RS06405;product=thiamine pyrophosphate-dependent enzyme;protein_id=WP_240366256.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1213500	1213811	.	+	.	ID=gene-PKHYL_RS06410;Name=PKHYL_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06410;old_locus_tag=PKHYL_15300
NZ_AP019516.1	Protein Homology	CDS	1213500	1213811	.	+	0	ID=cds-WP_240366257.1;Parent=gene-PKHYL_RS06410;Dbxref=Genbank:WP_240366257.1;Name=WP_240366257.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018628.2;locus_tag=PKHYL_RS06410;product=GlpM family protein;protein_id=WP_240366257.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1214217	1216011	.	+	.	ID=gene-PKHYL_RS06415;Name=PKHYL_RS06415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06415;old_locus_tag=PKHYL_15310;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1214217	1216011	.	+	0	ID=cds-PKHYL_RS06415;Parent=gene-PKHYL_RS06415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443188.1;locus_tag=PKHYL_RS06415;product=potassium/proton antiporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1216026	1216337	.	-	.	ID=gene-PKHYL_RS06420;Name=PKHYL_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06420;old_locus_tag=PKHYL_15320
NZ_AP019516.1	GeneMarkS-2+	CDS	1216026	1216337	.	-	0	ID=cds-WP_240366575.1;Parent=gene-PKHYL_RS06420;Dbxref=Genbank:WP_240366575.1;Name=WP_240366575.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06420;product=hypothetical protein;protein_id=WP_240366575.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1216417	1216605	.	-	.	ID=gene-PKHYL_RS06425;Name=PKHYL_RS06425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06425;partial=true;pseudo=true;start_range=.,1216417
NZ_AP019516.1	Protein Homology	CDS	1216417	1216605	.	-	0	ID=cds-PKHYL_RS06425;Parent=gene-PKHYL_RS06425;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=PKHYL_RS06425;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,1216417;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1216724	1216819	.	-	.	ID=gene-PKHYL_RS17325;Name=PKHYL_RS17325;end_range=1216819,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17325;partial=true;pseudo=true;start_range=.,1216724
NZ_AP019516.1	Protein Homology	CDS	1216724	1216819	.	-	0	ID=cds-PKHYL_RS17325;Parent=gene-PKHYL_RS17325;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1216819,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004642898.1;locus_tag=PKHYL_RS17325;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,1216724;transl_table=11
NZ_AP019516.1	RefSeq	gene	1216963	1217283	.	-	.	ID=gene-PKHYL_RS06430;Name=PKHYL_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06430;old_locus_tag=PKHYL_15330
NZ_AP019516.1	Protein Homology	CDS	1216963	1217283	.	-	0	ID=cds-WP_240366258.1;Parent=gene-PKHYL_RS06430;Dbxref=Genbank:WP_240366258.1;Name=WP_240366258.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014860.2;locus_tag=PKHYL_RS06430;product=hypothetical protein;protein_id=WP_240366258.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1217310	1217633	.	-	.	ID=gene-PKHYL_RS06435;Name=PKHYL_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06435;old_locus_tag=PKHYL_15340
NZ_AP019516.1	Protein Homology	CDS	1217310	1217633	.	-	0	ID=cds-WP_228724571.1;Parent=gene-PKHYL_RS06435;Dbxref=Genbank:WP_228724571.1;Name=WP_228724571.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020893.2;locus_tag=PKHYL_RS06435;product=VTT domain-containing protein;protein_id=WP_228724571.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1218068	1218600	.	-	.	ID=gene-PKHYL_RS06440;Name=PKHYL_RS06440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06440;old_locus_tag=PKHYL_15360;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1218068	1218600	.	-	0	ID=cds-PKHYL_RS06440;Parent=gene-PKHYL_RS06440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702033.1;locus_tag=PKHYL_RS06440;product=DUF2058 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1218933	1219274	.	+	.	ID=gene-PKHYL_RS06445;Name=PKHYL_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06445;old_locus_tag=PKHYL_15370
NZ_AP019516.1	Protein Homology	CDS	1218933	1219274	.	+	0	ID=cds-WP_240366259.1;Parent=gene-PKHYL_RS06445;Dbxref=Genbank:WP_240366259.1;Name=WP_240366259.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012791.2;locus_tag=PKHYL_RS06445;product=universal stress protein;protein_id=WP_240366259.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1219234	1219797	.	+	.	ID=gene-PKHYL_RS06450;Name=PKHYL_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06450;old_locus_tag=PKHYL_15380
NZ_AP019516.1	Protein Homology	CDS	1219234	1219797	.	+	0	ID=cds-WP_240366260.1;Parent=gene-PKHYL_RS06450;Dbxref=Genbank:WP_240366260.1;Name=WP_240366260.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012791.2;locus_tag=PKHYL_RS06450;product=universal stress protein;protein_id=WP_240366260.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1220012	1220695	.	+	.	ID=gene-PKHYL_RS06455;Name=PKHYL_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06455;old_locus_tag=PKHYL_15390
NZ_AP019516.1	Protein Homology	CDS	1220012	1220695	.	+	0	ID=cds-WP_240366261.1;Parent=gene-PKHYL_RS06455;Dbxref=Genbank:WP_240366261.1;Name=WP_240366261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197992.1;locus_tag=PKHYL_RS06455;product=cupin domain-containing protein;protein_id=WP_240366261.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1221183	1221419	.	+	.	ID=gene-PKHYL_RS06460;Name=PKHYL_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06460;old_locus_tag=PKHYL_15400
NZ_AP019516.1	GeneMarkS-2+	CDS	1221183	1221419	.	+	0	ID=cds-WP_240366262.1;Parent=gene-PKHYL_RS06460;Dbxref=Genbank:WP_240366262.1;Name=WP_240366262.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06460;product=hypothetical protein;protein_id=WP_240366262.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1221455	1222405	.	-	.	ID=gene-PKHYL_RS06465;Name=PKHYL_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06465;old_locus_tag=PKHYL_15410
NZ_AP019516.1	Protein Homology	CDS	1221455	1222405	.	-	0	ID=cds-WP_240366263.1;Parent=gene-PKHYL_RS06465;Dbxref=Genbank:WP_240366263.1;Name=WP_240366263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513649.1;locus_tag=PKHYL_RS06465;product=acyltransferase;protein_id=WP_240366263.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1222610	1222803	.	-	.	ID=gene-PKHYL_RS06470;Name=PKHYL_RS06470;end_range=1222803,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06470;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1222610	1222803	.	-	0	ID=cds-PKHYL_RS06470;Parent=gene-PKHYL_RS06470;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=1222803,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543393.1;locus_tag=PKHYL_RS06470;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1222820	1223059	.	+	.	ID=gene-PKHYL_RS06475;Name=PKHYL_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06475;old_locus_tag=PKHYL_15420
NZ_AP019516.1	Protein Homology	CDS	1222820	1223059	.	+	0	ID=cds-WP_240366264.1;Parent=gene-PKHYL_RS06475;Dbxref=Genbank:WP_240366264.1;Name=WP_240366264.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012273.2;locus_tag=PKHYL_RS06475;product=glutathione binding-like protein;protein_id=WP_240366264.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1223315	1223899	.	+	.	ID=gene-PKHYL_RS06480;Name=PKHYL_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06480;old_locus_tag=PKHYL_15430
NZ_AP019516.1	Protein Homology	CDS	1223315	1223899	.	+	0	ID=cds-WP_240366265.1;Parent=gene-PKHYL_RS06480;Dbxref=Genbank:WP_240366265.1;Name=WP_240366265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200982.1;locus_tag=PKHYL_RS06480;product=TetR/AcrR family transcriptional regulator;protein_id=WP_240366265.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1223982	1224158	.	-	.	ID=gene-PKHYL_RS06485;Name=PKHYL_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06485;old_locus_tag=PKHYL_15440
NZ_AP019516.1	GeneMarkS-2+	CDS	1223982	1224158	.	-	0	ID=cds-WP_240366266.1;Parent=gene-PKHYL_RS06485;Dbxref=Genbank:WP_240366266.1;Name=WP_240366266.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06485;product=hypothetical protein;protein_id=WP_240366266.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1224373	1225287	.	-	.	ID=gene-PKHYL_RS06490;Name=PKHYL_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06490;old_locus_tag=PKHYL_15450
NZ_AP019516.1	Protein Homology	CDS	1224373	1225287	.	-	0	ID=cds-WP_240366267.1;Parent=gene-PKHYL_RS06490;Dbxref=Genbank:WP_240366267.1;Name=WP_240366267.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019633.2;locus_tag=PKHYL_RS06490;product=siderophore-interacting protein;protein_id=WP_240366267.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1225310	1225477	.	-	.	ID=gene-PKHYL_RS06495;Name=PKHYL_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06495;old_locus_tag=PKHYL_15460
NZ_AP019516.1	GeneMarkS-2+	CDS	1225310	1225477	.	-	0	ID=cds-WP_240366268.1;Parent=gene-PKHYL_RS06495;Dbxref=Genbank:WP_240366268.1;Name=WP_240366268.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06495;product=hypothetical protein;protein_id=WP_240366268.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1225665	1226428	.	+	.	ID=gene-PKHYL_RS06500;Name=PKHYL_RS06500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06500;old_locus_tag=PKHYL_15480;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1225665	1226428	.	+	0	ID=cds-PKHYL_RS06500;Parent=gene-PKHYL_RS06500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197366.1;locus_tag=PKHYL_RS06500;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1226479	1226757	.	+	.	ID=gene-PKHYL_RS06505;Name=PKHYL_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06505
NZ_AP019516.1	GeneMarkS-2+	CDS	1226479	1226757	.	+	0	ID=cds-WP_240366269.1;Parent=gene-PKHYL_RS06505;Dbxref=Genbank:WP_240366269.1;Name=WP_240366269.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06505;product=hypothetical protein;protein_id=WP_240366269.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1226833	1227540	.	+	.	ID=gene-PKHYL_RS06510;Name=PKHYL_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06510;old_locus_tag=PKHYL_15490
NZ_AP019516.1	GeneMarkS-2+	CDS	1226833	1227540	.	+	0	ID=cds-WP_240366270.1;Parent=gene-PKHYL_RS06510;Dbxref=Genbank:WP_240366270.1;Name=WP_240366270.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06510;product=ABC transporter substrate-binding protein;protein_id=WP_240366270.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1227540	1227806	.	+	.	ID=gene-PKHYL_RS06515;Name=PKHYL_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06515;old_locus_tag=PKHYL_15500
NZ_AP019516.1	GeneMarkS-2+	CDS	1227540	1227806	.	+	0	ID=cds-WP_240366271.1;Parent=gene-PKHYL_RS06515;Dbxref=Genbank:WP_240366271.1;Name=WP_240366271.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06515;product=hypothetical protein;protein_id=WP_240366271.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1227748	1228860	.	+	.	ID=gene-PKHYL_RS06520;Name=PKHYL_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06520;old_locus_tag=PKHYL_15510
NZ_AP019516.1	Protein Homology	CDS	1227748	1228860	.	+	0	ID=cds-WP_240366272.1;Parent=gene-PKHYL_RS06520;Dbxref=Genbank:WP_240366272.1;Name=WP_240366272.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: protein motif:HMM:NF013219.2;locus_tag=PKHYL_RS06520;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_240366272.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1228862	1229128	.	+	.	ID=gene-PKHYL_RS17330;Name=PKHYL_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17330;old_locus_tag=PKHYL_15520
NZ_AP019516.1	Protein Homology	CDS	1228862	1229128	.	+	0	ID=cds-WP_269778279.1;Parent=gene-PKHYL_RS17330;Dbxref=Genbank:WP_269778279.1;Name=WP_269778279.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: protein motif:HMM:NF013219.2;locus_tag=PKHYL_RS17330;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_269778279.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1229119	1229679	.	+	.	ID=gene-PKHYL_RS06525;Name=PKHYL_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06525;old_locus_tag=PKHYL_15530
NZ_AP019516.1	Protein Homology	CDS	1229119	1229679	.	+	0	ID=cds-WP_269778280.1;Parent=gene-PKHYL_RS06525;Dbxref=Genbank:WP_269778280.1;Name=WP_269778280.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: protein motif:HMM:NF013219.2;locus_tag=PKHYL_RS06525;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_269778280.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1229721	1230080	.	+	.	ID=gene-PKHYL_RS17335;Name=PKHYL_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17335;old_locus_tag=PKHYL_15540
NZ_AP019516.1	Protein Homology	CDS	1229721	1230080	.	+	0	ID=cds-WP_269778281.1;Parent=gene-PKHYL_RS17335;Dbxref=Genbank:WP_269778281.1;Name=WP_269778281.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=PKHYL_RS17335;product=MFS transporter;protein_id=WP_269778281.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1230113	1231168	.	+	.	ID=gene-PKHYL_RS06530;Name=PKHYL_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06530;old_locus_tag=PKHYL_15550
NZ_AP019516.1	Protein Homology	CDS	1230113	1231168	.	+	0	ID=cds-WP_269778282.1;Parent=gene-PKHYL_RS06530;Dbxref=Genbank:WP_269778282.1;Name=WP_269778282.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=PKHYL_RS06530;product=MFS transporter;protein_id=WP_269778282.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1231519	1233138	.	+	.	ID=gene-PKHYL_RS17340;Name=PKHYL_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17340;old_locus_tag=PKHYL_15560
NZ_AP019516.1	Protein Homology	CDS	1231519	1233138	.	+	0	ID=cds-WP_269778283.1;Parent=gene-PKHYL_RS17340;Dbxref=Genbank:WP_269778283.1;Name=WP_269778283.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=PKHYL_RS17340;product=TonB-dependent receptor;protein_id=WP_269778283.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1233125	1233904	.	+	.	ID=gene-PKHYL_RS17345;Name=PKHYL_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17345;old_locus_tag=PKHYL_15570
NZ_AP019516.1	Protein Homology	CDS	1233125	1233904	.	+	0	ID=cds-WP_269778284.1;Parent=gene-PKHYL_RS17345;Dbxref=Genbank:WP_269778284.1;Name=WP_269778284.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=PKHYL_RS17345;product=TonB-dependent receptor;protein_id=WP_269778284.1;transl_table=11
NZ_AP019516.1	cmsearch	riboswitch	1234097	1234264	.	+	.	ID=id-NZ_AP019516.1:1234097..1234264;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_AP019516.1	RefSeq	gene	1234272	1234769	.	+	.	ID=gene-PKHYL_RS06540;Name=PKHYL_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06540;old_locus_tag=PKHYL_15580
NZ_AP019516.1	Protein Homology	CDS	1234272	1234769	.	+	0	ID=cds-WP_240366273.1;Parent=gene-PKHYL_RS06540;Dbxref=Genbank:WP_240366273.1;Name=WP_240366273.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014689.2;locus_tag=PKHYL_RS06540;product=manganese efflux pump MntP family protein;protein_id=WP_240366273.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1235406	1237084	.	+	.	ID=gene-PKHYL_RS06545;Name=PKHYL_RS06545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06545;old_locus_tag=PKHYL_15590;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1235406	1237084	.	+	0	ID=cds-PKHYL_RS06545;Parent=gene-PKHYL_RS06545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443203.1;locus_tag=PKHYL_RS06545;product=NAD-dependent malic enzyme;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1237259	1237378	.	+	.	ID=gene-PKHYL_RS06550;Name=PKHYL_RS06550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06550;partial=true;pseudo=true;start_range=.,1237259
NZ_AP019516.1	Protein Homology	CDS	1237259	1237378	.	+	0	ID=cds-PKHYL_RS06550;Parent=gene-PKHYL_RS06550;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197623.1;locus_tag=PKHYL_RS06550;partial=true;product=transposase;pseudo=true;start_range=.,1237259;transl_table=11
NZ_AP019516.1	RefSeq	gene	1237465	1237878	.	+	.	ID=gene-PKHYL_RS06555;Name=PKHYL_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06555
NZ_AP019516.1	Protein Homology	CDS	1237465	1237878	.	+	0	ID=cds-WP_240366274.1;Parent=gene-PKHYL_RS06555;Dbxref=Genbank:WP_240366274.1;Name=WP_240366274.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024751.2;locus_tag=PKHYL_RS06555;product=transposase;protein_id=WP_240366274.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1238177	1238503	.	+	.	ID=gene-PKHYL_RS06560;Name=PKHYL_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06560;old_locus_tag=PKHYL_15610
NZ_AP019516.1	GeneMarkS-2+	CDS	1238177	1238503	.	+	0	ID=cds-WP_240366275.1;Parent=gene-PKHYL_RS06560;Dbxref=Genbank:WP_240366275.1;Name=WP_240366275.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06560;product=hypothetical protein;protein_id=WP_240366275.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1238518	1238790	.	+	.	ID=gene-PKHYL_RS06565;Name=PKHYL_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06565;old_locus_tag=PKHYL_15620
NZ_AP019516.1	GeneMarkS-2+	CDS	1238518	1238790	.	+	0	ID=cds-WP_240366276.1;Parent=gene-PKHYL_RS06565;Dbxref=Genbank:WP_240366276.1;Name=WP_240366276.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06565;product=hypothetical protein;protein_id=WP_240366276.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1238882	1239538	.	+	.	ID=gene-PKHYL_RS06570;Name=PKHYL_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06570;old_locus_tag=PKHYL_15630
NZ_AP019516.1	GeneMarkS-2+	CDS	1238882	1239538	.	+	0	ID=cds-WP_240366277.1;Parent=gene-PKHYL_RS06570;Dbxref=Genbank:WP_240366277.1;Name=WP_240366277.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06570;product=hypothetical protein;protein_id=WP_240366277.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1239511	1239750	.	+	.	ID=gene-PKHYL_RS06575;Name=PKHYL_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06575;old_locus_tag=PKHYL_15640
NZ_AP019516.1	GeneMarkS-2+	CDS	1239511	1239750	.	+	0	ID=cds-WP_240366278.1;Parent=gene-PKHYL_RS06575;Dbxref=Genbank:WP_240366278.1;Name=WP_240366278.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06575;product=hypothetical protein;protein_id=WP_240366278.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1239729	1240445	.	+	.	ID=gene-PKHYL_RS06580;Name=PKHYL_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06580;old_locus_tag=PKHYL_15650
NZ_AP019516.1	Protein Homology	CDS	1239729	1240445	.	+	0	ID=cds-WP_240366279.1;Parent=gene-PKHYL_RS06580;Dbxref=Genbank:WP_240366279.1;Name=WP_240366279.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: protein motif:HMM:NF016173.2;locus_tag=PKHYL_RS06580;product=Dyp-type peroxidase;protein_id=WP_240366279.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1240512	1241660	.	+	.	ID=gene-PKHYL_RS06585;Name=PKHYL_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06585;old_locus_tag=PKHYL_15660
NZ_AP019516.1	GeneMarkS-2+	CDS	1240512	1241660	.	+	0	ID=cds-WP_240366280.1;Parent=gene-PKHYL_RS06585;Dbxref=Genbank:WP_240366280.1;Name=WP_240366280.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06585;product=catalase family protein;protein_id=WP_240366280.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1241714	1242208	.	+	.	ID=gene-PKHYL_RS06590;Name=PKHYL_RS06590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06590;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1241714	1242208	.	+	0	ID=cds-PKHYL_RS06590;Parent=gene-PKHYL_RS06590;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_071001643.1;locus_tag=PKHYL_RS06590;product=IS1595 family transposase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1242477	1243184	.	-	.	ID=gene-PKHYL_RS06595;Name=PKHYL_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06595;old_locus_tag=PKHYL_15680
NZ_AP019516.1	Protein Homology	CDS	1242477	1243184	.	-	0	ID=cds-WP_071001787.1;Parent=gene-PKHYL_RS06595;Dbxref=Genbank:WP_071001787.1;Name=WP_071001787.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015586042.1;locus_tag=PKHYL_RS06595;product=IS1 family transposase;protein_id=WP_071001787.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1243266	1243400	.	-	.	ID=gene-PKHYL_RS17350;Name=PKHYL_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17350
NZ_AP019516.1	GeneMarkS-2+	CDS	1243266	1243400	.	-	0	ID=cds-WP_269778285.1;Parent=gene-PKHYL_RS17350;Dbxref=Genbank:WP_269778285.1;Name=WP_269778285.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17350;product=hypothetical protein;protein_id=WP_269778285.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1243465	1244046	.	-	.	ID=gene-PKHYL_RS06600;Name=PKHYL_RS06600;end_range=1244046,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06600;old_locus_tag=PKHYL_15700;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1243465	1244046	.	-	0	ID=cds-PKHYL_RS06600;Parent=gene-PKHYL_RS06600;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016705;end_range=1244046,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: protein motif:HMM:NF012517.2;locus_tag=PKHYL_RS06600;partial=true;product=LLM class flavin-dependent oxidoreductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1244073	1244330	.	-	.	ID=gene-PKHYL_RS06605;Name=PKHYL_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06605;old_locus_tag=PKHYL_15710
NZ_AP019516.1	GeneMarkS-2+	CDS	1244073	1244330	.	-	0	ID=cds-WP_240366281.1;Parent=gene-PKHYL_RS06605;Dbxref=Genbank:WP_240366281.1;Name=WP_240366281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06605;product=hypothetical protein;protein_id=WP_240366281.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1244412	1244939	.	+	.	ID=gene-PKHYL_RS17355;Name=PKHYL_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17355;old_locus_tag=PKHYL_15720
NZ_AP019516.1	Protein Homology	CDS	1244412	1244939	.	+	0	ID=cds-WP_269778286.1;Parent=gene-PKHYL_RS17355;Dbxref=Genbank:WP_269778286.1;Name=WP_269778286.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012354.2;locus_tag=PKHYL_RS17355;product=LysR family transcriptional regulator;protein_id=WP_269778286.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1244944	1245387	.	+	.	ID=gene-PKHYL_RS17360;Name=PKHYL_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17360;old_locus_tag=PKHYL_15730
NZ_AP019516.1	Protein Homology	CDS	1244944	1245387	.	+	0	ID=cds-WP_269778287.1;Parent=gene-PKHYL_RS17360;Dbxref=Genbank:WP_269778287.1;Name=WP_269778287.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=PKHYL_RS17360;product=substrate binding domain-containing protein;protein_id=WP_269778287.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1245877	1246532	.	-	.	ID=gene-PKHYL_RS06615;Name=PKHYL_RS06615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06615;old_locus_tag=PKHYL_15740;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1245877	1246532	.	-	0	ID=cds-PKHYL_RS06615;Parent=gene-PKHYL_RS06615;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611454.1;locus_tag=PKHYL_RS06615;product=IS1595 family transposase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1246778	1247041	.	+	.	ID=gene-PKHYL_RS06620;Name=PKHYL_RS06620;end_range=1247041,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06620;old_locus_tag=PKHYL_15750;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1246778	1247041	.	+	0	ID=cds-PKHYL_RS06620;Parent=gene-PKHYL_RS06620;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1247041,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612080.1;locus_tag=PKHYL_RS06620;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1247328	1248881	.	-	.	ID=gene-PKHYL_RS06625;Name=PKHYL_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06625;old_locus_tag=PKHYL_15760
NZ_AP019516.1	Protein Homology	CDS	1247328	1248881	.	-	0	ID=cds-WP_240366282.1;Parent=gene-PKHYL_RS06625;Dbxref=Genbank:WP_240366282.1;Name=WP_240366282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007117300.1;locus_tag=PKHYL_RS06625;product=ATP-binding protein;protein_id=WP_240366282.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1248871	1249603	.	-	.	ID=gene-PKHYL_RS06630;Name=PKHYL_RS06630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06630;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1248871	1249603	.	-	0	ID=cds-PKHYL_RS06630;Parent=gene-PKHYL_RS06630;Note=frameshifted%3B internal stop;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942904.1;locus_tag=PKHYL_RS06630;product=heavy metal response regulator transcription factor;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1250462	1250590	.	+	.	ID=gene-PKHYL_RS17365;Name=PKHYL_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17365;old_locus_tag=PKHYL_15790
NZ_AP019516.1	GeneMarkS-2+	CDS	1250462	1250590	.	+	0	ID=cds-WP_269778288.1;Parent=gene-PKHYL_RS17365;Dbxref=Genbank:WP_269778288.1;Name=WP_269778288.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17365;product=hypothetical protein;protein_id=WP_269778288.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1250716	1250979	.	+	.	ID=gene-PKHYL_RS06635;Name=PKHYL_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06635;old_locus_tag=PKHYL_15800
NZ_AP019516.1	GeneMarkS-2+	CDS	1250716	1250979	.	+	0	ID=cds-WP_240366283.1;Parent=gene-PKHYL_RS06635;Dbxref=Genbank:WP_240366283.1;Name=WP_240366283.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06635;product=hypothetical protein;protein_id=WP_240366283.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1250964	1251281	.	+	.	ID=gene-PKHYL_RS06640;Name=PKHYL_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06640;old_locus_tag=PKHYL_15810
NZ_AP019516.1	Protein Homology	CDS	1250964	1251281	.	+	0	ID=cds-WP_240366284.1;Parent=gene-PKHYL_RS06640;Dbxref=Genbank:WP_240366284.1;Name=WP_240366284.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: protein motif:HMM:NF012264.2;locus_tag=PKHYL_RS06640;product=c-type cytochrome;protein_id=WP_240366284.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1251902	1252048	.	+	.	ID=gene-PKHYL_RS17370;Name=PKHYL_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17370
NZ_AP019516.1	Protein Homology	CDS	1251902	1252048	.	+	0	ID=cds-WP_269778315.1;Parent=gene-PKHYL_RS17370;Dbxref=Genbank:WP_269778315.1;Name=WP_269778315.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016130.2;locus_tag=PKHYL_RS17370;product=hypothetical protein;protein_id=WP_269778315.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1252148	1252807	.	+	.	ID=gene-PKHYL_RS06650;Name=PKHYL_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06650;old_locus_tag=PKHYL_15820
NZ_AP019516.1	Protein Homology	CDS	1252148	1252807	.	+	0	ID=cds-WP_240366285.1;Parent=gene-PKHYL_RS06650;Dbxref=Genbank:WP_240366285.1;Name=WP_240366285.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: protein motif:HMM:NF019352.2;locus_tag=PKHYL_RS06650;product=multicopper oxidase domain-containing protein;protein_id=WP_240366285.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1252831	1253355	.	+	.	ID=gene-PKHYL_RS06655;Name=PKHYL_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06655;old_locus_tag=PKHYL_15830
NZ_AP019516.1	Protein Homology	CDS	1252831	1253355	.	+	0	ID=cds-WP_240366286.1;Parent=gene-PKHYL_RS06655;Dbxref=Genbank:WP_240366286.1;Name=WP_240366286.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012612.2;locus_tag=PKHYL_RS06655;product=hypothetical protein;protein_id=WP_240366286.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1253496	1253809	.	+	.	ID=gene-PKHYL_RS06660;Name=PKHYL_RS06660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06660;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1253496	1253809	.	+	0	ID=cds-PKHYL_RS06660;Parent=gene-PKHYL_RS06660;Note=frameshifted;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF019351.2;locus_tag=PKHYL_RS06660;product=multicopper oxidase domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1254294	1254926	.	+	.	ID=gene-PKHYL_RS06665;Name=PKHYL_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06665
NZ_AP019516.1	Protein Homology	CDS	1254294	1254926	.	+	0	ID=cds-WP_240366502.1;Parent=gene-PKHYL_RS06665;Dbxref=Genbank:WP_240366502.1;Name=WP_240366502.1;Ontology_term=GO:0006878,GO:0005507,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=copper ion binding|0005507||IEA;go_process=cellular copper ion homeostasis|0006878||IEA;inference=COORDINATES: protein motif:HMM:NF017119.2;locus_tag=PKHYL_RS06665;product=copper resistance protein B;protein_id=WP_240366502.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1255021	1255497	.	+	.	ID=gene-PKHYL_RS06670;Name=PKHYL_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06670;old_locus_tag=PKHYL_15850
NZ_AP019516.1	Protein Homology	CDS	1255021	1255497	.	+	0	ID=cds-WP_071001778.1;Parent=gene-PKHYL_RS06670;Dbxref=Genbank:WP_071001778.1;Name=WP_071001778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959990.1;locus_tag=PKHYL_RS06670;product=DUF305 domain-containing protein;protein_id=WP_071001778.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1255643	1256131	.	+	.	ID=gene-PKHYL_RS17375;Name=PKHYL_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17375;old_locus_tag=PKHYL_15860
NZ_AP019516.1	Protein Homology	CDS	1255643	1256131	.	+	0	ID=cds-WP_269778289.1;Parent=gene-PKHYL_RS17375;Dbxref=Genbank:WP_269778289.1;Name=WP_269778289.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF024910.2;locus_tag=PKHYL_RS17375;product=amino acid permease;protein_id=WP_269778289.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1256158	1256505	.	+	.	ID=gene-PKHYL_RS17380;Name=PKHYL_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17380;old_locus_tag=PKHYL_15870
NZ_AP019516.1	Protein Homology	CDS	1256158	1256505	.	+	0	ID=cds-WP_269778290.1;Parent=gene-PKHYL_RS17380;Dbxref=Genbank:WP_269778290.1;Name=WP_269778290.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF024910.2;locus_tag=PKHYL_RS17380;product=amino acid permease;protein_id=WP_269778290.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1256499	1256810	.	+	.	ID=gene-PKHYL_RS06680;Name=PKHYL_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06680;old_locus_tag=PKHYL_15880
NZ_AP019516.1	GeneMarkS-2+	CDS	1256499	1256810	.	+	0	ID=cds-WP_240366287.1;Parent=gene-PKHYL_RS06680;Dbxref=Genbank:WP_240366287.1;Name=WP_240366287.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06680;product=hypothetical protein;protein_id=WP_240366287.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1256794	1257018	.	+	.	ID=gene-PKHYL_RS06685;Name=PKHYL_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06685;old_locus_tag=PKHYL_15890
NZ_AP019516.1	GeneMarkS-2+	CDS	1256794	1257018	.	+	0	ID=cds-WP_240366288.1;Parent=gene-PKHYL_RS06685;Dbxref=Genbank:WP_240366288.1;Name=WP_240366288.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06685;product=hypothetical protein;protein_id=WP_240366288.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1257109	1257366	.	+	.	ID=gene-PKHYL_RS06690;Name=PKHYL_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06690;old_locus_tag=PKHYL_15900
NZ_AP019516.1	GeneMarkS-2+	CDS	1257109	1257366	.	+	0	ID=cds-WP_240366289.1;Parent=gene-PKHYL_RS06690;Dbxref=Genbank:WP_240366289.1;Name=WP_240366289.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06690;product=hypothetical protein;protein_id=WP_240366289.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1257378	1257761	.	+	.	ID=gene-PKHYL_RS06695;Name=PKHYL_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06695;old_locus_tag=PKHYL_15910
NZ_AP019516.1	Protein Homology	CDS	1257378	1257761	.	+	0	ID=cds-WP_240366290.1;Parent=gene-PKHYL_RS06695;Dbxref=Genbank:WP_240366290.1;Name=WP_240366290.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016107.2;locus_tag=PKHYL_RS06695;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=WP_240366290.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1258252	1258407	.	+	.	ID=gene-PKHYL_RS06700;Name=PKHYL_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06700
NZ_AP019516.1	GeneMarkS-2+	CDS	1258252	1258407	.	+	0	ID=cds-WP_156770962.1;Parent=gene-PKHYL_RS06700;Dbxref=Genbank:WP_156770962.1;Name=WP_156770962.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06700;product=hypothetical protein;protein_id=WP_156770962.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1258823	1259266	.	+	.	ID=gene-PKHYL_RS06705;Name=PKHYL_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06705;old_locus_tag=PKHYL_15920
NZ_AP019516.1	Protein Homology	CDS	1258823	1259266	.	+	0	ID=cds-WP_240366291.1;Parent=gene-PKHYL_RS06705;Dbxref=Genbank:WP_240366291.1;Name=WP_240366291.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039593.1;locus_tag=PKHYL_RS06705;product=heavy metal-binding domain-containing protein;protein_id=WP_240366291.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1259182	1259655	.	+	.	ID=gene-PKHYL_RS06710;Name=PKHYL_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06710;old_locus_tag=PKHYL_15930
NZ_AP019516.1	Protein Homology	CDS	1259182	1259655	.	+	0	ID=cds-WP_240366292.1;Parent=gene-PKHYL_RS06710;Dbxref=Genbank:WP_240366292.1;Name=WP_240366292.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039593.1;locus_tag=PKHYL_RS06710;product=heavy metal-binding domain-containing protein;protein_id=WP_240366292.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1259807	1261201	.	+	.	ID=gene-PKHYL_RS06715;Name=PKHYL_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06715;old_locus_tag=PKHYL_15940
NZ_AP019516.1	Protein Homology	CDS	1259807	1261201	.	+	0	ID=cds-WP_240366503.1;Parent=gene-PKHYL_RS06715;Dbxref=Genbank:WP_240366503.1;Name=WP_240366503.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01511.1;locus_tag=PKHYL_RS06715;product=copper-translocating P-type ATPase;protein_id=WP_240366503.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1261201	1261428	.	+	.	ID=gene-PKHYL_RS06720;Name=PKHYL_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06720;old_locus_tag=PKHYL_15950
NZ_AP019516.1	GeneMarkS-2+	CDS	1261201	1261428	.	+	0	ID=cds-WP_240366293.1;Parent=gene-PKHYL_RS06720;Dbxref=Genbank:WP_240366293.1;Name=WP_240366293.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06720;product=hypothetical protein;protein_id=WP_240366293.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1261509	1261794	.	+	.	ID=gene-PKHYL_RS06725;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=pseudogene;locus_tag=PKHYL_RS06725;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1261509	1261794	.	+	0	ID=cds-PKHYL_RS06725;Parent=gene-PKHYL_RS06725;Note=frameshifted;Ontology_term=GO:0043953,GO:0016020;gbkey=CDS;gene=tatA;go_component=membrane|0016020||IEA;go_process=protein transport by the Tat complex|0043953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443916.1;locus_tag=PKHYL_RS06725;product=Sec-independent protein translocase subunit TatA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1261850	1262233	.	+	.	ID=gene-PKHYL_RS06730;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=PKHYL_RS06730;old_locus_tag=PKHYL_15970
NZ_AP019516.1	Protein Homology	CDS	1261850	1262233	.	+	0	ID=cds-WP_240366294.1;Parent=gene-PKHYL_RS06730;Dbxref=Genbank:WP_240366294.1;Name=WP_240366294.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959993.1;locus_tag=PKHYL_RS06730;product=Sec-independent protein translocase protein TatB;protein_id=WP_240366294.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1262359	1263074	.	+	.	ID=gene-PKHYL_RS06735;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=pseudogene;locus_tag=PKHYL_RS06735;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1262359	1263074	.	+	0	ID=cds-PKHYL_RS06735;Parent=gene-PKHYL_RS06735;Note=frameshifted%3B internal stop;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004909252.1;locus_tag=PKHYL_RS06735;product=twin-arginine translocase subunit TatC;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1263251	1264048	.	+	.	ID=gene-PKHYL_RS06740;Name=PKHYL_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06740;old_locus_tag=PKHYL_15990
NZ_AP019516.1	GeneMarkS-2+	CDS	1263251	1264048	.	+	0	ID=cds-WP_240366295.1;Parent=gene-PKHYL_RS06740;Dbxref=Genbank:WP_240366295.1;Name=WP_240366295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06740;product=hypothetical protein;protein_id=WP_240366295.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1264249	1264539	.	+	.	ID=gene-PKHYL_RS06745;Name=PKHYL_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06745;old_locus_tag=PKHYL_16000
NZ_AP019516.1	GeneMarkS-2+	CDS	1264249	1264539	.	+	0	ID=cds-WP_240366296.1;Parent=gene-PKHYL_RS06745;Dbxref=Genbank:WP_240366296.1;Name=WP_240366296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06745;product=hypothetical protein;protein_id=WP_240366296.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1264682	1264969	.	+	.	ID=gene-PKHYL_RS06750;Name=PKHYL_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06750;old_locus_tag=PKHYL_16010
NZ_AP019516.1	Protein Homology	CDS	1264682	1264969	.	+	0	ID=cds-WP_226949476.1;Parent=gene-PKHYL_RS06750;Dbxref=Genbank:WP_226949476.1;Name=WP_226949476.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039999.1;locus_tag=PKHYL_RS06750;product=DUF6122 family protein;protein_id=WP_226949476.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1265645	1266517	.	+	.	ID=gene-PKHYL_RS06755;Name=PKHYL_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06755;old_locus_tag=PKHYL_16030
NZ_AP019516.1	GeneMarkS-2+	CDS	1265645	1266517	.	+	0	ID=cds-WP_240366297.1;Parent=gene-PKHYL_RS06755;Dbxref=Genbank:WP_240366297.1;Name=WP_240366297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06755;product=leucine-rich repeat domain-containing protein;protein_id=WP_240366297.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1266526	1267128	.	+	.	ID=gene-PKHYL_RS06760;Name=PKHYL_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06760;old_locus_tag=PKHYL_16040
NZ_AP019516.1	GeneMarkS-2+	CDS	1266526	1267128	.	+	0	ID=cds-WP_240366298.1;Parent=gene-PKHYL_RS06760;Dbxref=Genbank:WP_240366298.1;Name=WP_240366298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06760;product=leucine-rich repeat domain-containing protein;protein_id=WP_240366298.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1267278	1267781	.	+	.	ID=gene-PKHYL_RS06765;Name=PKHYL_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06765;old_locus_tag=PKHYL_16050
NZ_AP019516.1	GeneMarkS-2+	CDS	1267278	1267781	.	+	0	ID=cds-WP_240366299.1;Parent=gene-PKHYL_RS06765;Dbxref=Genbank:WP_240366299.1;Name=WP_240366299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06765;product=hypothetical protein;protein_id=WP_240366299.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1267778	1268434	.	-	.	ID=gene-PKHYL_RS06770;Name=PKHYL_RS06770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06770;old_locus_tag=PKHYL_16060;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1267778	1268434	.	-	0	ID=cds-PKHYL_RS06770;Parent=gene-PKHYL_RS06770;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611454.1;locus_tag=PKHYL_RS06770;product=IS1595 family transposase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1268494	1268811	.	+	.	ID=gene-PKHYL_RS06775;Name=PKHYL_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06775;old_locus_tag=PKHYL_16070
NZ_AP019516.1	GeneMarkS-2+	CDS	1268494	1268811	.	+	0	ID=cds-WP_240366300.1;Parent=gene-PKHYL_RS06775;Dbxref=Genbank:WP_240366300.1;Name=WP_240366300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06775;product=hypothetical protein;protein_id=WP_240366300.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1268804	1269355	.	+	.	ID=gene-PKHYL_RS06780;Name=PKHYL_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06780;old_locus_tag=PKHYL_16080
NZ_AP019516.1	GeneMarkS-2+	CDS	1268804	1269355	.	+	0	ID=cds-WP_240366301.1;Parent=gene-PKHYL_RS06780;Dbxref=Genbank:WP_240366301.1;Name=WP_240366301.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06780;product=hypothetical protein;protein_id=WP_240366301.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1270365	1271078	.	-	.	ID=gene-PKHYL_RS06785;Name=PKHYL_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06785;old_locus_tag=PKHYL_16100
NZ_AP019516.1	Protein Homology	CDS	1270365	1271078	.	-	0	ID=cds-WP_240366302.1;Parent=gene-PKHYL_RS06785;Dbxref=Genbank:WP_240366302.1;Name=WP_240366302.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021498.2;locus_tag=PKHYL_RS06785;product=DUF2220 domain-containing protein;protein_id=WP_240366302.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1271151	1271516	.	-	.	ID=gene-PKHYL_RS06790;Name=PKHYL_RS06790;end_range=1271516,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06790;old_locus_tag=PKHYL_16110;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1271151	1271516	.	-	0	ID=cds-PKHYL_RS06790;Parent=gene-PKHYL_RS06790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1271516,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023223.2;locus_tag=PKHYL_RS06790;partial=true;product=DUF3322 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1271644	1272063	.	-	.	ID=gene-PKHYL_RS06795;Name=PKHYL_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06795;old_locus_tag=PKHYL_16120
NZ_AP019516.1	Protein Homology	CDS	1271644	1272063	.	-	0	ID=cds-WP_240366303.1;Parent=gene-PKHYL_RS06795;Dbxref=Genbank:WP_240366303.1;Name=WP_240366303.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024947.2;locus_tag=PKHYL_RS06795;product=SbcC/MukB-like Walker B domain-containing protein;protein_id=WP_240366303.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1272450	1272827	.	-	.	ID=gene-PKHYL_RS06800;Name=PKHYL_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06800;old_locus_tag=PKHYL_16140
NZ_AP019516.1	GeneMarkS-2+	CDS	1272450	1272827	.	-	0	ID=cds-WP_240366304.1;Parent=gene-PKHYL_RS06800;Dbxref=Genbank:WP_240366304.1;Name=WP_240366304.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06800;product=hypothetical protein;protein_id=WP_240366304.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1272767	1273213	.	-	.	ID=gene-PKHYL_RS06805;Name=PKHYL_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06805;old_locus_tag=PKHYL_16150
NZ_AP019516.1	GeneMarkS-2+	CDS	1272767	1273213	.	-	0	ID=cds-WP_240366305.1;Parent=gene-PKHYL_RS06805;Dbxref=Genbank:WP_240366305.1;Name=WP_240366305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06805;product=hypothetical protein;protein_id=WP_240366305.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1273250	1273597	.	-	.	ID=gene-PKHYL_RS06810;Name=PKHYL_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06810;old_locus_tag=PKHYL_16160
NZ_AP019516.1	GeneMarkS-2+	CDS	1273250	1273597	.	-	0	ID=cds-WP_240366306.1;Parent=gene-PKHYL_RS06810;Dbxref=Genbank:WP_240366306.1;Name=WP_240366306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06810;product=hypothetical protein;protein_id=WP_240366306.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1273618	1274454	.	-	.	ID=gene-PKHYL_RS06815;Name=PKHYL_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06815;old_locus_tag=PKHYL_16170
NZ_AP019516.1	GeneMarkS-2+	CDS	1273618	1274454	.	-	0	ID=cds-WP_240366307.1;Parent=gene-PKHYL_RS06815;Dbxref=Genbank:WP_240366307.1;Name=WP_240366307.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06815;product=hypothetical protein;protein_id=WP_240366307.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1274641	1275030	.	-	.	ID=gene-PKHYL_RS06820;Name=PKHYL_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06820;old_locus_tag=PKHYL_16190
NZ_AP019516.1	Protein Homology	CDS	1274641	1275030	.	-	0	ID=cds-WP_240366308.1;Parent=gene-PKHYL_RS06820;Dbxref=Genbank:WP_240366308.1;Name=WP_240366308.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024944.2;locus_tag=PKHYL_RS06820;product=AAA family ATPase;protein_id=WP_240366308.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1275127	1275363	.	-	.	ID=gene-PKHYL_RS06825;Name=PKHYL_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06825;old_locus_tag=PKHYL_16200
NZ_AP019516.1	GeneMarkS-2+	CDS	1275127	1275363	.	-	0	ID=cds-WP_240366309.1;Parent=gene-PKHYL_RS06825;Dbxref=Genbank:WP_240366309.1;Name=WP_240366309.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06825;product=DUF4194 domain-containing protein;protein_id=WP_240366309.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1275388	1276014	.	-	.	ID=gene-PKHYL_RS06830;Name=PKHYL_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06830;old_locus_tag=PKHYL_16210
NZ_AP019516.1	Protein Homology	CDS	1275388	1276014	.	-	0	ID=cds-WP_240366310.1;Parent=gene-PKHYL_RS06830;Dbxref=Genbank:WP_240366310.1;Name=WP_240366310.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025205.2;locus_tag=PKHYL_RS06830;product=DUF4194 domain-containing protein;protein_id=WP_240366310.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1276080	1277039	.	-	.	ID=gene-PKHYL_RS06835;Name=PKHYL_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06835;old_locus_tag=PKHYL_16220
NZ_AP019516.1	Protein Homology	CDS	1276080	1277039	.	-	0	ID=cds-WP_240366311.1;Parent=gene-PKHYL_RS06835;Dbxref=Genbank:WP_240366311.1;Name=WP_240366311.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023283.2;locus_tag=PKHYL_RS06835;product=DUF3375 family protein;protein_id=WP_240366311.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1277069	1277539	.	-	.	ID=gene-PKHYL_RS06840;Name=PKHYL_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06840;old_locus_tag=PKHYL_16230
NZ_AP019516.1	Protein Homology	CDS	1277069	1277539	.	-	0	ID=cds-WP_240366312.1;Parent=gene-PKHYL_RS06840;Dbxref=Genbank:WP_240366312.1;Name=WP_240366312.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023283.2;locus_tag=PKHYL_RS06840;product=DUF3375 family protein;protein_id=WP_240366312.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1277913	1278455	.	-	.	ID=gene-PKHYL_RS06845;Name=PKHYL_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06845;old_locus_tag=PKHYL_16240
NZ_AP019516.1	Protein Homology	CDS	1277913	1278455	.	-	0	ID=cds-WP_240366313.1;Parent=gene-PKHYL_RS06845;Dbxref=Genbank:WP_240366313.1;Name=WP_240366313.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022019.2;locus_tag=PKHYL_RS06845;product=GIY-YIG nuclease family protein;protein_id=WP_240366313.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1278674	1279402	.	-	.	ID=gene-PKHYL_RS06850;Name=PKHYL_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06850;old_locus_tag=PKHYL_16250
NZ_AP019516.1	GeneMarkS-2+	CDS	1278674	1279402	.	-	0	ID=cds-WP_240366314.1;Parent=gene-PKHYL_RS06850;Dbxref=Genbank:WP_240366314.1;Name=WP_240366314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06850;product=hypothetical protein;protein_id=WP_240366314.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1279336	1281156	.	-	.	ID=gene-PKHYL_RS06855;Name=PKHYL_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06855;old_locus_tag=PKHYL_16260
NZ_AP019516.1	GeneMarkS-2+	CDS	1279336	1281156	.	-	0	ID=cds-WP_240366315.1;Parent=gene-PKHYL_RS06855;Dbxref=Genbank:WP_240366315.1;Name=WP_240366315.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06855;product=DNA helicase;protein_id=WP_240366315.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1281153	1281389	.	-	.	ID=gene-PKHYL_RS06860;Name=PKHYL_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06860;old_locus_tag=PKHYL_16270
NZ_AP019516.1	GeneMarkS-2+	CDS	1281153	1281389	.	-	0	ID=cds-WP_240366316.1;Parent=gene-PKHYL_RS06860;Dbxref=Genbank:WP_240366316.1;Name=WP_240366316.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06860;product=hypothetical protein;protein_id=WP_240366316.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1281473	1281952	.	-	.	ID=gene-PKHYL_RS06865;Name=PKHYL_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06865;old_locus_tag=PKHYL_16280
NZ_AP019516.1	GeneMarkS-2+	CDS	1281473	1281952	.	-	0	ID=cds-WP_240366317.1;Parent=gene-PKHYL_RS06865;Dbxref=Genbank:WP_240366317.1;Name=WP_240366317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06865;product=hypothetical protein;protein_id=WP_240366317.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1282133	1282357	.	-	.	ID=gene-PKHYL_RS06870;Name=PKHYL_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06870;old_locus_tag=PKHYL_16290
NZ_AP019516.1	GeneMarkS-2+	CDS	1282133	1282357	.	-	0	ID=cds-WP_240366318.1;Parent=gene-PKHYL_RS06870;Dbxref=Genbank:WP_240366318.1;Name=WP_240366318.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06870;product=hypothetical protein;protein_id=WP_240366318.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1282659	1282916	.	-	.	ID=gene-PKHYL_RS06875;Name=PKHYL_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06875;old_locus_tag=PKHYL_16300
NZ_AP019516.1	GeneMarkS-2+	CDS	1282659	1282916	.	-	0	ID=cds-WP_240366319.1;Parent=gene-PKHYL_RS06875;Dbxref=Genbank:WP_240366319.1;Name=WP_240366319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06875;product=hypothetical protein;protein_id=WP_240366319.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1282913	1283410	.	-	.	ID=gene-PKHYL_RS06880;Name=PKHYL_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06880;old_locus_tag=PKHYL_16310
NZ_AP019516.1	GeneMarkS-2+	CDS	1282913	1283410	.	-	0	ID=cds-WP_240366320.1;Parent=gene-PKHYL_RS06880;Dbxref=Genbank:WP_240366320.1;Name=WP_240366320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06880;product=hypothetical protein;protein_id=WP_240366320.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1283407	1283796	.	-	.	ID=gene-PKHYL_RS06885;Name=PKHYL_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06885;old_locus_tag=PKHYL_16320
NZ_AP019516.1	GeneMarkS-2+	CDS	1283407	1283796	.	-	0	ID=cds-WP_240366321.1;Parent=gene-PKHYL_RS06885;Dbxref=Genbank:WP_240366321.1;Name=WP_240366321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06885;product=hypothetical protein;protein_id=WP_240366321.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1283793	1284518	.	-	.	ID=gene-PKHYL_RS06890;Name=PKHYL_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06890;old_locus_tag=PKHYL_16330
NZ_AP019516.1	GeneMarkS-2+	CDS	1283793	1284518	.	-	0	ID=cds-WP_240366322.1;Parent=gene-PKHYL_RS06890;Dbxref=Genbank:WP_240366322.1;Name=WP_240366322.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06890;product=hypothetical protein;protein_id=WP_240366322.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1285087	1285494	.	+	.	ID=gene-PKHYL_RS06895;Name=PKHYL_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06895;old_locus_tag=PKHYL_16350
NZ_AP019516.1	GeneMarkS-2+	CDS	1285087	1285494	.	+	0	ID=cds-WP_240366323.1;Parent=gene-PKHYL_RS06895;Dbxref=Genbank:WP_240366323.1;Name=WP_240366323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06895;product=hypothetical protein;protein_id=WP_240366323.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1286097	1286522	.	-	.	ID=gene-PKHYL_RS06900;Name=PKHYL_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06900;old_locus_tag=PKHYL_16360
NZ_AP019516.1	GeneMarkS-2+	CDS	1286097	1286522	.	-	0	ID=cds-WP_240366324.1;Parent=gene-PKHYL_RS06900;Dbxref=Genbank:WP_240366324.1;Name=WP_240366324.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06900;product=hypothetical protein;protein_id=WP_240366324.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1286852	1287220	.	-	.	ID=gene-PKHYL_RS06905;Name=PKHYL_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06905;old_locus_tag=PKHYL_16380
NZ_AP019516.1	GeneMarkS-2+	CDS	1286852	1287220	.	-	0	ID=cds-WP_240366325.1;Parent=gene-PKHYL_RS06905;Dbxref=Genbank:WP_240366325.1;Name=WP_240366325.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06905;product=hypothetical protein;protein_id=WP_240366325.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1288028	1288180	.	-	.	ID=gene-PKHYL_RS06910;Name=PKHYL_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06910
NZ_AP019516.1	Protein Homology	CDS	1288028	1288180	.	-	0	ID=cds-WP_240366326.1;Parent=gene-PKHYL_RS06910;Dbxref=Genbank:WP_240366326.1;Name=WP_240366326.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024242.2;locus_tag=PKHYL_RS06910;product=helix-turn-helix domain-containing protein;protein_id=WP_240366326.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1288236	1288406	.	-	.	ID=gene-PKHYL_RS06915;Name=PKHYL_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06915;old_locus_tag=PKHYL_16390
NZ_AP019516.1	GeneMarkS-2+	CDS	1288236	1288406	.	-	0	ID=cds-WP_240366327.1;Parent=gene-PKHYL_RS06915;Dbxref=Genbank:WP_240366327.1;Name=WP_240366327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06915;product=hypothetical protein;protein_id=WP_240366327.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1288551	1289042	.	-	.	ID=gene-PKHYL_RS06920;Name=PKHYL_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06920;old_locus_tag=PKHYL_16400
NZ_AP019516.1	Protein Homology	CDS	1288551	1289042	.	-	0	ID=cds-WP_240366328.1;Parent=gene-PKHYL_RS06920;Dbxref=Genbank:WP_240366328.1;Name=WP_240366328.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024039.2;locus_tag=PKHYL_RS06920;product=AraC family transcriptional regulator ligand-binding domain-containing protein;protein_id=WP_240366328.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1289217	1289522	.	+	.	ID=gene-PKHYL_RS06925;Name=PKHYL_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06925;old_locus_tag=PKHYL_16410
NZ_AP019516.1	GeneMarkS-2+	CDS	1289217	1289522	.	+	0	ID=cds-WP_240366329.1;Parent=gene-PKHYL_RS06925;Dbxref=Genbank:WP_240366329.1;Name=WP_240366329.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06925;product=hypothetical protein;protein_id=WP_240366329.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1289488	1290053	.	+	.	ID=gene-PKHYL_RS17385;Name=PKHYL_RS17385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17385;old_locus_tag=PKHYL_16420;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1289488	1290053	.	+	0	ID=cds-PKHYL_RS17385;Parent=gene-PKHYL_RS17385;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012398.2;locus_tag=PKHYL_RS17385;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1290122	1290562	.	+	.	ID=gene-PKHYL_RS17390;Name=PKHYL_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17390;old_locus_tag=PKHYL_16440
NZ_AP019516.1	Protein Homology	CDS	1290122	1290562	.	+	0	ID=cds-WP_269778291.1;Parent=gene-PKHYL_RS17390;Dbxref=Genbank:WP_269778291.1;Name=WP_269778291.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012398.2;locus_tag=PKHYL_RS17390;product=aldehyde dehydrogenase family protein;protein_id=WP_269778291.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1290757	1290936	.	+	.	ID=gene-PKHYL_RS06935;Name=PKHYL_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06935;old_locus_tag=PKHYL_16450
NZ_AP019516.1	Protein Homology	CDS	1290757	1290936	.	+	0	ID=cds-WP_240366330.1;Parent=gene-PKHYL_RS06935;Dbxref=Genbank:WP_240366330.1;Name=WP_240366330.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013086.2;locus_tag=PKHYL_RS06935;product=FAD-binding protein;protein_id=WP_240366330.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1290897	1291676	.	+	.	ID=gene-PKHYL_RS06940;Name=PKHYL_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06940;old_locus_tag=PKHYL_16460
NZ_AP019516.1	GeneMarkS-2+	CDS	1290897	1291676	.	+	0	ID=cds-WP_240366331.1;Parent=gene-PKHYL_RS06940;Dbxref=Genbank:WP_240366331.1;Name=WP_240366331.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06940;product=hypothetical protein;protein_id=WP_240366331.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1291631	1292041	.	+	.	ID=gene-PKHYL_RS06945;Name=PKHYL_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06945;old_locus_tag=PKHYL_16470
NZ_AP019516.1	GeneMarkS-2+	CDS	1291631	1292041	.	+	0	ID=cds-WP_240366332.1;Parent=gene-PKHYL_RS06945;Dbxref=Genbank:WP_240366332.1;Name=WP_240366332.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06945;product=hypothetical protein;protein_id=WP_240366332.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1292285	1292404	.	+	.	ID=gene-PKHYL_RS06950;Name=PKHYL_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06950
NZ_AP019516.1	Protein Homology	CDS	1292285	1292404	.	+	0	ID=cds-WP_240366333.1;Parent=gene-PKHYL_RS06950;Dbxref=Genbank:WP_240366333.1;Name=WP_240366333.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017050.2;locus_tag=PKHYL_RS06950;product=GMC family oxidoreductase;protein_id=WP_240366333.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1292516	1292767	.	+	.	ID=gene-PKHYL_RS06955;Name=PKHYL_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06955;old_locus_tag=PKHYL_16480
NZ_AP019516.1	GeneMarkS-2+	CDS	1292516	1292767	.	+	0	ID=cds-WP_240366334.1;Parent=gene-PKHYL_RS06955;Dbxref=Genbank:WP_240366334.1;Name=WP_240366334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06955;product=hypothetical protein;protein_id=WP_240366334.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1292791	1294020	.	+	.	ID=gene-PKHYL_RS06960;Name=PKHYL_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06960;old_locus_tag=PKHYL_16490
NZ_AP019516.1	Protein Homology	CDS	1292791	1294020	.	+	0	ID=cds-WP_269778292.1;Parent=gene-PKHYL_RS06960;Dbxref=Genbank:WP_269778292.1;Name=WP_269778292.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012955.2;locus_tag=PKHYL_RS06960;product=MBL fold metallo-hydrolase;protein_id=WP_269778292.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1294008	1294487	.	+	.	ID=gene-PKHYL_RS06965;Name=PKHYL_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06965;old_locus_tag=PKHYL_16500
NZ_AP019516.1	Protein Homology	CDS	1294008	1294487	.	+	0	ID=cds-WP_269778293.1;Parent=gene-PKHYL_RS06965;Dbxref=Genbank:WP_269778293.1;Name=WP_269778293.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026214.2;locus_tag=PKHYL_RS06965;product=SCP2 sterol-binding domain-containing protein;protein_id=WP_269778293.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1294685	1296310	.	+	.	ID=gene-PKHYL_RS06970;Name=PKHYL_RS06970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS06970;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1294685	1296310	.	+	0	ID=cds-PKHYL_RS06970;Parent=gene-PKHYL_RS06970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005222219.1;locus_tag=PKHYL_RS06970;product=long-chain-fatty-acid--CoA ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1296807	1297100	.	+	.	ID=gene-PKHYL_RS06975;Name=PKHYL_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06975;old_locus_tag=PKHYL_16530
NZ_AP019516.1	GeneMarkS-2+	CDS	1296807	1297100	.	+	0	ID=cds-WP_240366335.1;Parent=gene-PKHYL_RS06975;Dbxref=Genbank:WP_240366335.1;Name=WP_240366335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06975;product=hypothetical protein;protein_id=WP_240366335.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1297100	1297390	.	+	.	ID=gene-PKHYL_RS06980;Name=PKHYL_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06980;old_locus_tag=PKHYL_16540
NZ_AP019516.1	GeneMarkS-2+	CDS	1297100	1297390	.	+	0	ID=cds-WP_240366336.1;Parent=gene-PKHYL_RS06980;Dbxref=Genbank:WP_240366336.1;Name=WP_240366336.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06980;product=hypothetical protein;protein_id=WP_240366336.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1297646	1298695	.	+	.	ID=gene-PKHYL_RS06985;Name=PKHYL_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06985;old_locus_tag=PKHYL_16560
NZ_AP019516.1	GeneMarkS-2+	CDS	1297646	1298695	.	+	0	ID=cds-WP_240366337.1;Parent=gene-PKHYL_RS06985;Dbxref=Genbank:WP_240366337.1;Name=WP_240366337.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06985;product=hypothetical protein;protein_id=WP_240366337.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1299417	1299866	.	+	.	ID=gene-PKHYL_RS06990;Name=PKHYL_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06990;old_locus_tag=PKHYL_16570
NZ_AP019516.1	GeneMarkS-2+	CDS	1299417	1299866	.	+	0	ID=cds-WP_240366338.1;Parent=gene-PKHYL_RS06990;Dbxref=Genbank:WP_240366338.1;Name=WP_240366338.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06990;product=hypothetical protein;protein_id=WP_240366338.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1299878	1300138	.	+	.	ID=gene-PKHYL_RS06995;Name=PKHYL_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS06995;old_locus_tag=PKHYL_16580
NZ_AP019516.1	GeneMarkS-2+	CDS	1299878	1300138	.	+	0	ID=cds-WP_240366339.1;Parent=gene-PKHYL_RS06995;Dbxref=Genbank:WP_240366339.1;Name=WP_240366339.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS06995;product=hypothetical protein;protein_id=WP_240366339.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1300158	1301528	.	+	.	ID=gene-PKHYL_RS07000;Name=PKHYL_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07000;old_locus_tag=PKHYL_16590
NZ_AP019516.1	GeneMarkS-2+	CDS	1300158	1301528	.	+	0	ID=cds-WP_240366340.1;Parent=gene-PKHYL_RS07000;Dbxref=Genbank:WP_240366340.1;Name=WP_240366340.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07000;product=hypothetical protein;protein_id=WP_240366340.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1301593	1302489	.	+	.	ID=gene-PKHYL_RS07005;Name=PKHYL_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07005;old_locus_tag=PKHYL_16600
NZ_AP019516.1	GeneMarkS-2+	CDS	1301593	1302489	.	+	0	ID=cds-WP_240366341.1;Parent=gene-PKHYL_RS07005;Dbxref=Genbank:WP_240366341.1;Name=WP_240366341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07005;product=hypothetical protein;protein_id=WP_240366341.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1302702	1303589	.	-	.	ID=gene-PKHYL_RS07010;Name=PKHYL_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07010;old_locus_tag=PKHYL_16610
NZ_AP019516.1	GeneMarkS-2+	CDS	1302702	1303589	.	-	0	ID=cds-WP_240366342.1;Parent=gene-PKHYL_RS07010;Dbxref=Genbank:WP_240366342.1;Name=WP_240366342.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07010;product=hypothetical protein;protein_id=WP_240366342.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1303586	1304281	.	-	.	ID=gene-PKHYL_RS07015;Name=PKHYL_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07015;old_locus_tag=PKHYL_16620
NZ_AP019516.1	GeneMarkS-2+	CDS	1303586	1304281	.	-	0	ID=cds-WP_240366343.1;Parent=gene-PKHYL_RS07015;Dbxref=Genbank:WP_240366343.1;Name=WP_240366343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07015;product=hypothetical protein;protein_id=WP_240366343.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1304314	1304556	.	-	.	ID=gene-PKHYL_RS07020;Name=PKHYL_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07020;old_locus_tag=PKHYL_16630
NZ_AP019516.1	GeneMarkS-2+	CDS	1304314	1304556	.	-	0	ID=cds-WP_240366344.1;Parent=gene-PKHYL_RS07020;Dbxref=Genbank:WP_240366344.1;Name=WP_240366344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07020;product=hypothetical protein;protein_id=WP_240366344.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1304598	1305257	.	-	.	ID=gene-PKHYL_RS07025;Name=PKHYL_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07025;old_locus_tag=PKHYL_16640
NZ_AP019516.1	GeneMarkS-2+	CDS	1304598	1305257	.	-	0	ID=cds-WP_240366345.1;Parent=gene-PKHYL_RS07025;Dbxref=Genbank:WP_240366345.1;Name=WP_240366345.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07025;product=hypothetical protein;protein_id=WP_240366345.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1305386	1306228	.	-	.	ID=gene-PKHYL_RS07030;Name=PKHYL_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07030;old_locus_tag=PKHYL_16650
NZ_AP019516.1	GeneMarkS-2+	CDS	1305386	1306228	.	-	0	ID=cds-WP_240366346.1;Parent=gene-PKHYL_RS07030;Dbxref=Genbank:WP_240366346.1;Name=WP_240366346.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07030;product=hypothetical protein;protein_id=WP_240366346.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1306509	1307993	.	-	.	ID=gene-PKHYL_RS07035;Name=PKHYL_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07035;old_locus_tag=PKHYL_16660
NZ_AP019516.1	Protein Homology	CDS	1306509	1307993	.	-	0	ID=cds-WP_240366347.1;Parent=gene-PKHYL_RS07035;Dbxref=Genbank:WP_240366347.1;Name=WP_240366347.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017539.2;locus_tag=PKHYL_RS07035;product=NACHT domain-containing protein;protein_id=WP_240366347.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1308215	1309410	.	+	.	ID=gene-PKHYL_RS07040;Name=PKHYL_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07040;old_locus_tag=PKHYL_16680
NZ_AP019516.1	Protein Homology	CDS	1308215	1308491	.	+	0	ID=cds-WP_240366348.1;Parent=gene-PKHYL_RS07040;Dbxref=Genbank:WP_240366348.1;Name=WP_240366348.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611467.1;locus_tag=PKHYL_RS07040;product=IS3 family transposase;protein_id=WP_240366348.1;transl_table=11
NZ_AP019516.1	Protein Homology	CDS	1308491	1309410	.	+	2	ID=cds-WP_240366348.1;Parent=gene-PKHYL_RS07040;Dbxref=Genbank:WP_240366348.1;Name=WP_240366348.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611467.1;locus_tag=PKHYL_RS07040;product=IS3 family transposase;protein_id=WP_240366348.1;transl_table=11
NZ_AP019516.1	cmsearch	sequence_feature	1308490	1308606	.	+	.	ID=id-PKHYL_RS07040;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS07040
NZ_AP019516.1	RefSeq	gene	1309986	1310381	.	-	.	ID=gene-PKHYL_RS07045;Name=PKHYL_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07045;old_locus_tag=PKHYL_16690
NZ_AP019516.1	Protein Homology	CDS	1309986	1310381	.	-	0	ID=cds-WP_240366349.1;Parent=gene-PKHYL_RS07045;Dbxref=Genbank:WP_240366349.1;Name=WP_240366349.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=PKHYL_RS07045;product=tyrosine-type recombinase/integrase;protein_id=WP_240366349.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1310673	1310981	.	-	.	ID=gene-PKHYL_RS07050;Name=PKHYL_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07050;old_locus_tag=PKHYL_16710
NZ_AP019516.1	GeneMarkS-2+	CDS	1310673	1310981	.	-	0	ID=cds-WP_240366350.1;Parent=gene-PKHYL_RS07050;Dbxref=Genbank:WP_240366350.1;Name=WP_240366350.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07050;product=hypothetical protein;protein_id=WP_240366350.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1311431	1311507	.	-	.	ID=gene-PKHYL_RS07055;Name=PKHYL_RS07055;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS07055;old_locus_tag=PKHYL_t00240
NZ_AP019516.1	tRNAscan-SE	tRNA	1311431	1311507	.	-	.	ID=rna-PKHYL_RS07055;Parent=gene-PKHYL_RS07055;anticodon=(pos:complement(1311471..1311473));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS07055;product=tRNA-Ile
NZ_AP019516.1	tRNAscan-SE	exon	1311431	1311507	.	-	.	ID=exon-PKHYL_RS07055-1;Parent=rna-PKHYL_RS07055;anticodon=(pos:complement(1311471..1311473));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS07055;product=tRNA-Ile
NZ_AP019516.1	RefSeq	gene	1311624	1312202	.	-	.	ID=gene-PKHYL_RS07060;Name=PKHYL_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07060;old_locus_tag=PKHYL_16740
NZ_AP019516.1	Protein Homology	CDS	1311624	1312202	.	-	0	ID=cds-WP_240366351.1;Parent=gene-PKHYL_RS07060;Dbxref=Genbank:WP_240366351.1;Name=WP_240366351.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=PKHYL_RS07060;product=SDR family oxidoreductase;protein_id=WP_240366351.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1312238	1312411	.	-	.	ID=gene-PKHYL_RS07065;Name=PKHYL_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07065
NZ_AP019516.1	GeneMarkS-2+	CDS	1312238	1312411	.	-	0	ID=cds-WP_240366352.1;Parent=gene-PKHYL_RS07065;Dbxref=Genbank:WP_240366352.1;Name=WP_240366352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07065;product=hypothetical protein;protein_id=WP_240366352.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1312438	1312569	.	-	.	ID=gene-PKHYL_RS17395;Name=PKHYL_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17395
NZ_AP019516.1	GeneMarkS-2+	CDS	1312438	1312569	.	-	0	ID=cds-WP_269778294.1;Parent=gene-PKHYL_RS17395;Dbxref=Genbank:WP_269778294.1;Name=WP_269778294.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17395;product=hypothetical protein;protein_id=WP_269778294.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1312857	1313624	.	-	.	ID=gene-PKHYL_RS07070;Name=PKHYL_RS07070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07070;old_locus_tag=PKHYL_16750;partial=true;pseudo=true;start_range=.,1312857
NZ_AP019516.1	Protein Homology	CDS	1312857	1313624	.	-	0	ID=cds-PKHYL_RS07070;Parent=gene-PKHYL_RS07070;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513336.1;locus_tag=PKHYL_RS07070;partial=true;product=tRNA nucleotidyltransferase;pseudo=true;start_range=.,1312857;transl_table=11
NZ_AP019516.1	RefSeq	gene	1313788	1316106	.	-	.	ID=gene-PKHYL_RS07075;Name=PKHYL_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07075;old_locus_tag=PKHYL_16760
NZ_AP019516.1	Protein Homology	CDS	1313788	1316106	.	-	0	ID=cds-WP_093069872.1;Parent=gene-PKHYL_RS07075;Dbxref=Genbank:WP_093069872.1;Name=WP_093069872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443216.1;locus_tag=PKHYL_RS07075;product=NADP-dependent malic enzyme;protein_id=WP_093069872.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1316472	1317939	.	-	.	ID=gene-PKHYL_RS07080;Name=PKHYL_RS07080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07080;old_locus_tag=PKHYL_16770;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1316472	1317939	.	-	0	ID=cds-PKHYL_RS07080;Parent=gene-PKHYL_RS07080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005050123.1;locus_tag=PKHYL_RS07080;product=YdiU family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1318217	1319380	.	+	.	ID=gene-PKHYL_RS07085;Name=PKHYL_RS07085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07085;old_locus_tag=PKHYL_16800;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1318217	1319380	.	+	0	ID=cds-PKHYL_RS07085;Parent=gene-PKHYL_RS07085;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611943.1;locus_tag=PKHYL_RS07085;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1319650	1320842	.	-	.	ID=gene-PKHYL_RS07090;Name=PKHYL_RS07090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07090;old_locus_tag=PKHYL_16810;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1319650	1320842	.	-	0	ID=cds-PKHYL_RS07090;Parent=gene-PKHYL_RS07090;Note=frameshifted;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960519.1;locus_tag=PKHYL_RS07090;product=fatty acid desaturase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1320863	1321066	.	-	.	ID=gene-PKHYL_RS07095;Name=PKHYL_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07095
NZ_AP019516.1	GeneMarkS-2+	CDS	1320863	1321066	.	-	0	ID=cds-WP_240366353.1;Parent=gene-PKHYL_RS07095;Dbxref=Genbank:WP_240366353.1;Name=WP_240366353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07095;product=hypothetical protein;protein_id=WP_240366353.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1321315	1321734	.	-	.	ID=gene-PKHYL_RS07100;Name=PKHYL_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07100;old_locus_tag=PKHYL_16830
NZ_AP019516.1	Protein Homology	CDS	1321315	1321734	.	-	0	ID=cds-WP_240366354.1;Parent=gene-PKHYL_RS07100;Dbxref=Genbank:WP_240366354.1;Name=WP_240366354.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015000.2;locus_tag=PKHYL_RS07100;product=glycerophosphodiester phosphodiesterase;protein_id=WP_240366354.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1321736	1322044	.	-	.	ID=gene-PKHYL_RS07105;Name=PKHYL_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07105;old_locus_tag=PKHYL_16840
NZ_AP019516.1	Protein Homology	CDS	1321736	1322044	.	-	0	ID=cds-WP_240366355.1;Parent=gene-PKHYL_RS07105;Dbxref=Genbank:WP_240366355.1;Name=WP_240366355.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: protein motif:HMM:NF015000.2;locus_tag=PKHYL_RS07105;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_240366355.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1322411	1323337	.	+	.	ID=gene-PKHYL_RS07110;Name=PKHYL_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07110;old_locus_tag=PKHYL_16850
NZ_AP019516.1	Protein Homology	CDS	1322411	1323337	.	+	0	ID=cds-WP_240366356.1;Parent=gene-PKHYL_RS07110;Dbxref=Genbank:WP_240366356.1;Name=WP_240366356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443220.1;locus_tag=PKHYL_RS07110;product=hypothetical protein;protein_id=WP_240366356.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1323483	1324079	.	-	.	ID=gene-PKHYL_RS07115;Name=PKHYL_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07115;old_locus_tag=PKHYL_16860
NZ_AP019516.1	Protein Homology	CDS	1323483	1324079	.	-	0	ID=cds-WP_093069884.1;Parent=gene-PKHYL_RS07115;Dbxref=Genbank:WP_093069884.1;Name=WP_093069884.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199758.1;locus_tag=PKHYL_RS07115;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_093069884.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1324271	1325727	.	+	.	ID=gene-PKHYL_RS07120;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=pseudogene;locus_tag=PKHYL_RS07120;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1324271	1325727	.	+	0	ID=cds-PKHYL_RS07120;Parent=gene-PKHYL_RS07120;Note=frameshifted;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443222.1;locus_tag=PKHYL_RS07120;product=cysteine--tRNA ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1325893	1326261	.	+	.	ID=gene-PKHYL_RS07125;Name=PKHYL_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07125;old_locus_tag=PKHYL_16910
NZ_AP019516.1	GeneMarkS-2+	CDS	1325893	1326261	.	+	0	ID=cds-WP_240366357.1;Parent=gene-PKHYL_RS07125;Dbxref=Genbank:WP_240366357.1;Name=WP_240366357.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07125;product=hypothetical protein;protein_id=WP_240366357.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1326326	1327858	.	+	.	ID=gene-PKHYL_RS07130;Name=PKHYL_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07130;old_locus_tag=PKHYL_16920
NZ_AP019516.1	Protein Homology	CDS	1326326	1327858	.	+	0	ID=cds-WP_240366358.1;Parent=gene-PKHYL_RS07130;Dbxref=Genbank:WP_240366358.1;Name=WP_240366358.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013117.2;locus_tag=PKHYL_RS07130;product=mechanosensitive ion channel family protein;protein_id=WP_240366358.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1328118	1329590	.	+	.	ID=gene-PKHYL_RS07135;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=PKHYL_RS07135;old_locus_tag=PKHYL_16930
NZ_AP019516.1	Protein Homology	CDS	1328118	1329590	.	+	0	ID=cds-WP_186474353.1;Parent=gene-PKHYL_RS07135;Dbxref=Genbank:WP_186474353.1;Name=WP_186474353.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659156.1;locus_tag=PKHYL_RS07135;product=IMP dehydrogenase;protein_id=WP_186474353.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1329787	1331155	.	+	.	ID=gene-PKHYL_RS07140;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=pseudogene;locus_tag=PKHYL_RS07140;old_locus_tag=PKHYL_16950;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1329787	1331155	.	+	0	ID=cds-PKHYL_RS07140;Parent=gene-PKHYL_RS07140;Note=frameshifted;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443224.1;locus_tag=PKHYL_RS07140;product=phosphoglucosamine mutase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1331258	1331914	.	+	.	ID=gene-PKHYL_RS07145;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=PKHYL_RS07145;old_locus_tag=PKHYL_16960
NZ_AP019516.1	Protein Homology	CDS	1331258	1331914	.	+	0	ID=cds-WP_201587730.1;Parent=gene-PKHYL_RS07145;Dbxref=Genbank:WP_201587730.1;Name=WP_201587730.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201068.1;locus_tag=PKHYL_RS07145;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_201587730.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1332021	1333337	.	-	.	ID=gene-PKHYL_RS07150;Name=PKHYL_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07150;old_locus_tag=PKHYL_16970
NZ_AP019516.1	Protein Homology	CDS	1332021	1333337	.	-	0	ID=cds-WP_240366359.1;Parent=gene-PKHYL_RS07150;Dbxref=Genbank:WP_240366359.1;Name=WP_240366359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201071.1;locus_tag=PKHYL_RS07150;product=HlyD family secretion protein;protein_id=WP_240366359.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1333426	1334565	.	-	.	ID=gene-PKHYL_RS07155;Name=PKHYL_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07155;old_locus_tag=PKHYL_16980
NZ_AP019516.1	GeneMarkS-2+	CDS	1333426	1334565	.	-	0	ID=cds-WP_240366360.1;Parent=gene-PKHYL_RS07155;Dbxref=Genbank:WP_240366360.1;Name=WP_240366360.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07155;product=hypothetical protein;protein_id=WP_240366360.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1334525	1335001	.	-	.	ID=gene-PKHYL_RS07160;Name=PKHYL_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07160;old_locus_tag=PKHYL_16990
NZ_AP019516.1	GeneMarkS-2+	CDS	1334525	1335001	.	-	0	ID=cds-WP_240366361.1;Parent=gene-PKHYL_RS07160;Dbxref=Genbank:WP_240366361.1;Name=WP_240366361.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07160;product=hypothetical protein;protein_id=WP_240366361.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1335485	1336114	.	-	.	ID=gene-PKHYL_RS07165;Name=PKHYL_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07165;old_locus_tag=PKHYL_17000
NZ_AP019516.1	Protein Homology	CDS	1335485	1336114	.	-	0	ID=cds-WP_071003624.1;Parent=gene-PKHYL_RS07165;Dbxref=Genbank:WP_071003624.1;Name=WP_071003624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960352.1;locus_tag=PKHYL_RS07165;product=glutathione S-transferase;protein_id=WP_071003624.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1336158	1336835	.	-	.	ID=gene-PKHYL_RS07170;Name=PKHYL_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07170;old_locus_tag=PKHYL_17010
NZ_AP019516.1	Protein Homology	CDS	1336158	1336835	.	-	0	ID=cds-WP_212564440.1;Parent=gene-PKHYL_RS07170;Dbxref=Genbank:WP_212564440.1;Name=WP_212564440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201076.1;locus_tag=PKHYL_RS07170;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_212564440.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1337090	1338138	.	-	.	ID=gene-PKHYL_RS07175;Name=PKHYL_RS07175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07175;old_locus_tag=PKHYL_17020;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1337090	1338138	.	-	0	ID=cds-PKHYL_RS07175;Parent=gene-PKHYL_RS07175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443228.1;locus_tag=PKHYL_RS07175;product=NADP-dependent oxidoreductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1338413	1339623	.	-	.	ID=gene-PKHYL_RS07180;Name=PKHYL_RS07180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07180;old_locus_tag=PKHYL_17050;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1338413	1339623	.	-	0	ID=cds-PKHYL_RS07180;Parent=gene-PKHYL_RS07180;Note=frameshifted;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201081.1;locus_tag=PKHYL_RS07180;product=iron-containing alcohol dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1339905	1340264	.	-	.	ID=gene-PKHYL_RS07185;Name=PKHYL_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07185;old_locus_tag=PKHYL_17060
NZ_AP019516.1	Protein Homology	CDS	1339905	1340264	.	-	0	ID=cds-WP_240366362.1;Parent=gene-PKHYL_RS07185;Dbxref=Genbank:WP_240366362.1;Name=WP_240366362.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028235.2;locus_tag=PKHYL_RS07185;product=TetR family transcriptional regulator C-terminal domain-containing protein;protein_id=WP_240366362.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1340329	1340508	.	-	.	ID=gene-PKHYL_RS07190;Name=PKHYL_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07190;old_locus_tag=PKHYL_17070
NZ_AP019516.1	GeneMarkS-2+	CDS	1340329	1340508	.	-	0	ID=cds-WP_240366363.1;Parent=gene-PKHYL_RS07190;Dbxref=Genbank:WP_240366363.1;Name=WP_240366363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07190;product=TetR/AcrR family transcriptional regulator;protein_id=WP_240366363.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1340921	1342338	.	+	.	ID=gene-PKHYL_RS07195;Name=PKHYL_RS07195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07195;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1340921	1342338	.	+	0	ID=cds-PKHYL_RS07195;Parent=gene-PKHYL_RS07195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012398.2;locus_tag=PKHYL_RS07195;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1343205	1343441	.	+	.	ID=gene-PKHYL_RS07200;Name=PKHYL_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07200;old_locus_tag=PKHYL_17120
NZ_AP019516.1	GeneMarkS-2+	CDS	1343205	1343441	.	+	0	ID=cds-WP_240366364.1;Parent=gene-PKHYL_RS07200;Dbxref=Genbank:WP_240366364.1;Name=WP_240366364.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07200;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_240366364.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1343429	1344502	.	+	.	ID=gene-PKHYL_RS07205;Name=PKHYL_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07205;old_locus_tag=PKHYL_17130
NZ_AP019516.1	Protein Homology	CDS	1343429	1344502	.	+	0	ID=cds-WP_240366365.1;Parent=gene-PKHYL_RS07205;Dbxref=Genbank:WP_240366365.1;Name=WP_240366365.1;Ontology_term=GO:0006281,GO:0003913;gbkey=CDS;go_function=DNA photolyase activity|0003913||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: protein motif:HMM:TIGR02765.1;locus_tag=PKHYL_RS07205;product=DASH family cryptochrome;protein_id=WP_240366365.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1344785	1345531	.	-	.	ID=gene-PKHYL_RS07210;Name=PKHYL_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07210;old_locus_tag=PKHYL_17140
NZ_AP019516.1	Protein Homology	CDS	1344785	1345531	.	-	0	ID=cds-WP_093069920.1;Parent=gene-PKHYL_RS07210;Dbxref=Genbank:WP_093069920.1;Name=WP_093069920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443669.1;locus_tag=PKHYL_RS07210;product=hypothetical protein;protein_id=WP_093069920.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1345620	1346365	.	-	.	ID=gene-PKHYL_RS07215;Name=PKHYL_RS07215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07215;old_locus_tag=PKHYL_17150;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1345620	1346365	.	-	0	ID=cds-PKHYL_RS07215;Parent=gene-PKHYL_RS07215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443669.1;locus_tag=PKHYL_RS07215;product=hypothetical protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1346861	1347985	.	+	.	ID=gene-PKHYL_RS07220;Name=PKHYL_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07220;old_locus_tag=PKHYL_17160
NZ_AP019516.1	Protein Homology	CDS	1346861	1347985	.	+	0	ID=cds-WP_083328973.1;Parent=gene-PKHYL_RS07220;Dbxref=Genbank:WP_083328973.1;Name=WP_083328973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201108.1;locus_tag=PKHYL_RS07220;product=MFS transporter;protein_id=WP_083328973.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1348293	1349966	.	+	.	ID=gene-PKHYL_RS07225;Name=PKHYL_RS07225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07225;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1348293	1349966	.	+	0	ID=cds-PKHYL_RS07225;Parent=gene-PKHYL_RS07225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280175.1;locus_tag=PKHYL_RS07225;product=fatty acid--CoA ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1350281	1350610	.	+	.	ID=gene-PKHYL_RS07230;Name=PKHYL_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07230;old_locus_tag=PKHYL_17200
NZ_AP019516.1	Protein Homology	CDS	1350281	1350610	.	+	0	ID=cds-WP_240366366.1;Parent=gene-PKHYL_RS07230;Dbxref=Genbank:WP_240366366.1;Name=WP_240366366.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027503.2;locus_tag=PKHYL_RS07230;product=hypothetical protein;protein_id=WP_240366366.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1350687	1351866	.	+	.	ID=gene-PKHYL_RS07235;Name=PKHYL_RS07235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07235;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1350687	1351866	.	+	0	ID=cds-PKHYL_RS07235;Parent=gene-PKHYL_RS07235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.2;locus_tag=PKHYL_RS07235;product=AMP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1351823	1352305	.	+	.	ID=gene-PKHYL_RS07240;Name=PKHYL_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07240;old_locus_tag=PKHYL_17230
NZ_AP019516.1	Protein Homology	CDS	1351823	1352305	.	+	0	ID=cds-WP_240366367.1;Parent=gene-PKHYL_RS07240;Dbxref=Genbank:WP_240366367.1;Name=WP_240366367.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024591.2;locus_tag=PKHYL_RS07240;product=hypothetical protein;protein_id=WP_240366367.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1352623	1354106	.	+	.	ID=gene-PKHYL_RS07245;Name=PKHYL_RS07245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07245;old_locus_tag=PKHYL_17250;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1352623	1354106	.	+	0	ID=cds-PKHYL_RS07245;Parent=gene-PKHYL_RS07245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201117.1;locus_tag=PKHYL_RS07245;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1354406	1354791	.	+	.	ID=gene-PKHYL_RS07250;Name=PKHYL_RS07250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07250;old_locus_tag=PKHYL_17260;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1354406	1354791	.	+	0	ID=cds-PKHYL_RS07250;Parent=gene-PKHYL_RS07250;Note=frameshifted;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF014790.2;locus_tag=PKHYL_RS07250;product=acyl-CoA dehydrogenase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1354791	1355450	.	+	.	ID=gene-PKHYL_RS07255;Name=PKHYL_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07255;old_locus_tag=PKHYL_17270
NZ_AP019516.1	Protein Homology	CDS	1354791	1355450	.	+	0	ID=cds-WP_240366368.1;Parent=gene-PKHYL_RS07255;Dbxref=Genbank:WP_240366368.1;Name=WP_240366368.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: protein motif:HMM:NF012656.2;locus_tag=PKHYL_RS07255;product=acyl-CoA dehydrogenase family protein;protein_id=WP_240366368.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1355483	1356265	.	+	.	ID=gene-PKHYL_RS07260;Name=PKHYL_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07260;old_locus_tag=PKHYL_17280
NZ_AP019516.1	Protein Homology	CDS	1355483	1356265	.	+	0	ID=cds-WP_240366369.1;Parent=gene-PKHYL_RS07260;Dbxref=Genbank:WP_240366369.1;Name=WP_240366369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201121.1;locus_tag=PKHYL_RS07260;product=enoyl-CoA hydratase;protein_id=WP_240366369.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1356338	1357597	.	+	.	ID=gene-PKHYL_RS07265;Name=PKHYL_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07265;old_locus_tag=PKHYL_17290
NZ_AP019516.1	Protein Homology	CDS	1356338	1357597	.	+	0	ID=cds-WP_240366370.1;Parent=gene-PKHYL_RS07265;Dbxref=Genbank:WP_240366370.1;Name=WP_240366370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201122.1;locus_tag=PKHYL_RS07265;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_240366370.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1357754	1358610	.	+	.	ID=gene-PKHYL_RS07270;Name=mmsB;gbkey=Gene;gene=mmsB;gene_biotype=pseudogene;locus_tag=PKHYL_RS07270;old_locus_tag=PKHYL_17300;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1357754	1358610	.	+	0	ID=cds-PKHYL_RS07270;Parent=gene-PKHYL_RS07270;Note=frameshifted;Ontology_term=GO:0006574,GO:0008442;gbkey=CDS;gene=mmsB;go_function=3-hydroxyisobutyrate dehydrogenase activity|0008442||IEA;go_process=valine catabolic process|0006574||IEA;inference=COORDINATES: protein motif:HMM:NF026183.2;locus_tag=PKHYL_RS07270;product=3-hydroxyisobutyrate dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1358770	1359527	.	-	.	ID=gene-PKHYL_RS07275;Name=PKHYL_RS07275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07275;old_locus_tag=PKHYL_17320;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1358770	1359527	.	-	0	ID=cds-PKHYL_RS07275;Parent=gene-PKHYL_RS07275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443661.1;locus_tag=PKHYL_RS07275;product=IclR family transcriptional regulator;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1360127	1361014	.	+	.	ID=gene-PKHYL_RS07280;Name=PKHYL_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07280;old_locus_tag=PKHYL_17330
NZ_AP019516.1	Protein Homology	CDS	1360127	1361014	.	+	0	ID=cds-WP_240366371.1;Parent=gene-PKHYL_RS07280;Dbxref=Genbank:WP_240366371.1;Name=WP_240366371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280183.1;locus_tag=PKHYL_RS07280;product=hypothetical protein;protein_id=WP_240366371.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1361134	1361871	.	-	.	ID=gene-PKHYL_RS07285;Name=PKHYL_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07285;old_locus_tag=PKHYL_17340
NZ_AP019516.1	Protein Homology	CDS	1361134	1361871	.	-	0	ID=cds-WP_240366372.1;Parent=gene-PKHYL_RS07285;Dbxref=Genbank:WP_240366372.1;Name=WP_240366372.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: protein motif:HMM:NF013786.2;locus_tag=PKHYL_RS07285;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_240366372.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1362267	1362785	.	-	.	ID=gene-PKHYL_RS07290;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=PKHYL_RS07290;old_locus_tag=PKHYL_17350
NZ_AP019516.1	Protein Homology	CDS	1362267	1362785	.	-	0	ID=cds-WP_093069940.1;Parent=gene-PKHYL_RS07290;Dbxref=Genbank:WP_093069940.1;Name=WP_093069940.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513840.1;locus_tag=PKHYL_RS07290;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_093069940.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1363067	1363702	.	-	.	ID=gene-PKHYL_RS07295;Name=PKHYL_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07295;old_locus_tag=PKHYL_17360
NZ_AP019516.1	Protein Homology	CDS	1363067	1363702	.	-	0	ID=cds-WP_093069943.1;Parent=gene-PKHYL_RS07295;Dbxref=Genbank:WP_093069943.1;Name=WP_093069943.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040030.1;locus_tag=PKHYL_RS07295;product=DUF6231 family protein;protein_id=WP_093069943.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1364111	1366710	.	+	.	ID=gene-PKHYL_RS07300;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=pseudogene;locus_tag=PKHYL_RS07300;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1364111	1366710	.	+	0	ID=cds-PKHYL_RS07300;Parent=gene-PKHYL_RS07300;Note=frameshifted;Ontology_term=GO:0006508,GO:0004177,GO:0008237;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513839.1;locus_tag=PKHYL_RS07300;product=aminopeptidase N;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1366939	1368018	.	-	.	ID=gene-PKHYL_RS07310;Name=PKHYL_RS07310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07310;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1366939	1368018	.	-	0	ID=cds-PKHYL_RS07310;Parent=gene-PKHYL_RS07310;Note=frameshifted;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280187.1;locus_tag=PKHYL_RS07310;product=3-deoxy-7-phosphoheptulonate synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1368470	1369786	.	+	.	ID=gene-PKHYL_RS07315;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=PKHYL_RS07315;old_locus_tag=PKHYL_17450
NZ_AP019516.1	Protein Homology	CDS	1368470	1369786	.	+	0	ID=cds-WP_240366374.1;Parent=gene-PKHYL_RS07315;Dbxref=Genbank:WP_240366374.1;Name=WP_240366374.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010202051.1;locus_tag=PKHYL_RS07315;product=lipid-A-disaccharide synthase;protein_id=WP_240366374.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1369809	1370681	.	+	.	ID=gene-PKHYL_RS07320;Name=PKHYL_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07320;old_locus_tag=PKHYL_17460
NZ_AP019516.1	Protein Homology	CDS	1369809	1370681	.	+	0	ID=cds-WP_240366375.1;Parent=gene-PKHYL_RS07320;Dbxref=Genbank:WP_240366375.1;Name=WP_240366375.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010202052.1;locus_tag=PKHYL_RS07320;product=ribonuclease HII;protein_id=WP_240366375.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1370928	1371692	.	+	.	ID=gene-PKHYL_RS07325;Name=PKHYL_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07325;old_locus_tag=PKHYL_17470
NZ_AP019516.1	GeneMarkS-2+	CDS	1370928	1371692	.	+	0	ID=cds-WP_240366376.1;Parent=gene-PKHYL_RS07325;Dbxref=Genbank:WP_240366376.1;Name=WP_240366376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07325;product=hypothetical protein;protein_id=WP_240366376.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1371685	1372110	.	+	.	ID=gene-PKHYL_RS07330;Name=PKHYL_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07330;old_locus_tag=PKHYL_17480
NZ_AP019516.1	GeneMarkS-2+	CDS	1371685	1372110	.	+	0	ID=cds-WP_240366377.1;Parent=gene-PKHYL_RS07330;Dbxref=Genbank:WP_240366377.1;Name=WP_240366377.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07330;product=hypothetical protein;protein_id=WP_240366377.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1372230	1372895	.	-	.	ID=gene-PKHYL_RS07335;Name=PKHYL_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07335;old_locus_tag=PKHYL_17490
NZ_AP019516.1	Protein Homology	CDS	1372230	1372895	.	-	0	ID=cds-WP_212564453.1;Parent=gene-PKHYL_RS07335;Dbxref=Genbank:WP_212564453.1;Name=WP_212564453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513834.1;locus_tag=PKHYL_RS07335;product=DUF924 family protein;protein_id=WP_212564453.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1372995	1374236	.	+	.	ID=gene-PKHYL_RS07340;Name=PKHYL_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07340;old_locus_tag=PKHYL_17500
NZ_AP019516.1	Protein Homology	CDS	1372995	1374236	.	+	0	ID=cds-WP_240366378.1;Parent=gene-PKHYL_RS07340;Dbxref=Genbank:WP_240366378.1;Name=WP_240366378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513833.1;locus_tag=PKHYL_RS07340;product=carboxynorspermidine decarboxylase;protein_id=WP_240366378.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1374634	1375062	.	+	.	ID=gene-PKHYL_RS07345;Name=PKHYL_RS07345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07345;old_locus_tag=PKHYL_17520;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1374634	1375062	.	+	0	ID=cds-PKHYL_RS07345;Parent=gene-PKHYL_RS07345;Note=internal stop;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF015400.2;locus_tag=PKHYL_RS07345;product=saccharopine dehydrogenase NADP-binding domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1375031	1375816	.	+	.	ID=gene-PKHYL_RS07350;Name=PKHYL_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07350;old_locus_tag=PKHYL_17530
NZ_AP019516.1	Protein Homology	CDS	1375031	1375816	.	+	0	ID=cds-WP_240366505.1;Parent=gene-PKHYL_RS07350;Dbxref=Genbank:WP_240366505.1;Name=WP_240366505.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027964.2;locus_tag=PKHYL_RS07350;product=hypothetical protein;protein_id=WP_240366505.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1376013	1376303	.	+	.	ID=gene-PKHYL_RS07355;Name=PKHYL_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07355;old_locus_tag=PKHYL_17540
NZ_AP019516.1	GeneMarkS-2+	CDS	1376013	1376303	.	+	0	ID=cds-WP_240366379.1;Parent=gene-PKHYL_RS07355;Dbxref=Genbank:WP_240366379.1;Name=WP_240366379.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07355;product=hypothetical protein;protein_id=WP_240366379.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1376290	1376874	.	+	.	ID=gene-PKHYL_RS07360;Name=PKHYL_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07360;old_locus_tag=PKHYL_17550
NZ_AP019516.1	GeneMarkS-2+	CDS	1376290	1376874	.	+	0	ID=cds-WP_240366380.1;Parent=gene-PKHYL_RS07360;Dbxref=Genbank:WP_240366380.1;Name=WP_240366380.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07360;product=hypothetical protein;protein_id=WP_240366380.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1377147	1378084	.	-	.	ID=gene-PKHYL_RS07365;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=pseudogene;locus_tag=PKHYL_RS07365;old_locus_tag=PKHYL_17560;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1377147	1378084	.	-	0	ID=cds-PKHYL_RS07365;Parent=gene-PKHYL_RS07365;Note=frameshifted;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673015.1;locus_tag=PKHYL_RS07365;product=protease HtpX;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1378437	1378958	.	+	.	ID=gene-PKHYL_RS07370;Name=PKHYL_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07370;old_locus_tag=PKHYL_17570
NZ_AP019516.1	Protein Homology	CDS	1378437	1378958	.	+	0	ID=cds-WP_223334195.1;Parent=gene-PKHYL_RS07370;Dbxref=Genbank:WP_223334195.1;Name=WP_223334195.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF014609.2;locus_tag=PKHYL_RS07370;product=PhzF family phenazine biosynthesis isomerase;protein_id=WP_223334195.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1379156	1379488	.	+	.	ID=gene-PKHYL_RS07375;Name=PKHYL_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07375;old_locus_tag=PKHYL_17580
NZ_AP019516.1	Protein Homology	CDS	1379156	1379488	.	+	0	ID=cds-WP_212564458.1;Parent=gene-PKHYL_RS07375;Dbxref=Genbank:WP_212564458.1;Name=WP_212564458.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513829.1;locus_tag=PKHYL_RS07375;product=YnfA family protein;protein_id=WP_212564458.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1380047	1380667	.	+	.	ID=gene-PKHYL_RS07380;Name=PKHYL_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07380;old_locus_tag=PKHYL_17590
NZ_AP019516.1	Protein Homology	CDS	1380047	1380667	.	+	0	ID=cds-WP_240366381.1;Parent=gene-PKHYL_RS07380;Dbxref=Genbank:WP_240366381.1;Name=WP_240366381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198104.1;locus_tag=PKHYL_RS07380;product=6-carboxytetrahydropterin synthase;protein_id=WP_240366381.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1380667	1381198	.	+	.	ID=gene-PKHYL_RS07385;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=pseudogene;locus_tag=PKHYL_RS07385;old_locus_tag=PKHYL_17610;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1380667	1381198	.	+	0	ID=cds-PKHYL_RS07385;Parent=gene-PKHYL_RS07385;Note=frameshifted;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443646.1;locus_tag=PKHYL_RS07385;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1381316	1381918	.	+	.	ID=gene-PKHYL_RS07390;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=PKHYL_RS07390;old_locus_tag=PKHYL_17620
NZ_AP019516.1	Protein Homology	CDS	1381316	1381918	.	+	0	ID=cds-WP_240366382.1;Parent=gene-PKHYL_RS07390;Dbxref=Genbank:WP_240366382.1;Name=WP_240366382.1;Ontology_term=GO:0006298,GO:0016887;gbkey=CDS;gene=mutL;go_function=ATP hydrolysis activity|0016887||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: protein motif:HMM:TIGR00585.2;locus_tag=PKHYL_RS07390;product=DNA mismatch repair endonuclease MutL;protein_id=WP_240366382.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1381855	1382841	.	+	.	ID=gene-PKHYL_RS07395;Name=PKHYL_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07395;old_locus_tag=PKHYL_17630
NZ_AP019516.1	Protein Homology	CDS	1381855	1382841	.	+	0	ID=cds-WP_240366383.1;Parent=gene-PKHYL_RS07395;Dbxref=Genbank:WP_240366383.1;Name=WP_240366383.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013299.2;locus_tag=PKHYL_RS07395;product=hypothetical protein;protein_id=WP_240366383.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1383025	1384173	.	+	.	ID=gene-PKHYL_RS07400;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=PKHYL_RS07400;old_locus_tag=PKHYL_17650
NZ_AP019516.1	Protein Homology	CDS	1383025	1384173	.	+	0	ID=cds-WP_240366384.1;Parent=gene-PKHYL_RS07400;Dbxref=Genbank:WP_240366384.1;Name=WP_240366384.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393878.1;locus_tag=PKHYL_RS07400;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_240366384.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1384578	1385109	.	+	.	ID=gene-PKHYL_RS07405;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=pseudogene;locus_tag=PKHYL_RS07405;old_locus_tag=PKHYL_17660;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1384578	1385109	.	+	0	ID=cds-PKHYL_RS07405;Parent=gene-PKHYL_RS07405;Note=frameshifted;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443643.1;locus_tag=PKHYL_RS07405;product=RNA chaperone Hfq;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1385330	1386324	.	+	.	ID=gene-PKHYL_RS07410;Name=PKHYL_RS07410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07410;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1385330	1386324	.	+	0	ID=cds-PKHYL_RS07410;Parent=gene-PKHYL_RS07410;Note=frameshifted;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198112.1;locus_tag=PKHYL_RS07410;product=KpsF/GutQ family sugar-phosphate isomerase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1386400	1386966	.	+	.	ID=gene-PKHYL_RS07415;Name=PKHYL_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07415;old_locus_tag=PKHYL_17700
NZ_AP019516.1	Protein Homology	CDS	1386400	1386966	.	+	0	ID=cds-WP_071001685.1;Parent=gene-PKHYL_RS07415;Dbxref=Genbank:WP_071001685.1;Name=WP_071001685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513822.1;locus_tag=PKHYL_RS07415;product=HAD hydrolase family protein;protein_id=WP_071001685.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1386963	1387547	.	+	.	ID=gene-PKHYL_RS07420;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=PKHYL_RS07420;old_locus_tag=PKHYL_17710
NZ_AP019516.1	Protein Homology	CDS	1386963	1387547	.	+	0	ID=cds-WP_058024069.1;Parent=gene-PKHYL_RS07420;Dbxref=Genbank:WP_058024069.1;Name=WP_058024069.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280201.1;locus_tag=PKHYL_RS07420;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_058024069.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1387701	1388181	.	+	.	ID=gene-PKHYL_RS07425;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=pseudogene;locus_tag=PKHYL_RS07425;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1387701	1388181	.	+	0	ID=cds-PKHYL_RS07425;Parent=gene-PKHYL_RS07425;Note=frameshifted;Ontology_term=GO:0015920,GO:0001530,GO:0030288,GO:0043190;gbkey=CDS;gene=lptA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520108.1;locus_tag=PKHYL_RS07425;product=lipopolysaccharide transport periplasmic protein LptA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1388248	1389027	.	+	.	ID=gene-PKHYL_RS07430;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=PKHYL_RS07430;old_locus_tag=PKHYL_17740
NZ_AP019516.1	Protein Homology	CDS	1388248	1389027	.	+	0	ID=cds-WP_071001684.1;Parent=gene-PKHYL_RS07430;Dbxref=Genbank:WP_071001684.1;Name=WP_071001684.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0009898,GO:0043190;gbkey=CDS;gene=lptB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513819.1;locus_tag=PKHYL_RS07430;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_071001684.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1389295	1390731	.	+	.	ID=gene-PKHYL_RS07435;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=PKHYL_RS07435;old_locus_tag=PKHYL_17750
NZ_AP019516.1	Protein Homology	CDS	1389295	1390731	.	+	0	ID=cds-WP_240366385.1;Parent=gene-PKHYL_RS07435;Dbxref=Genbank:WP_240366385.1;Name=WP_240366385.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513818.1;locus_tag=PKHYL_RS07435;product=DNA repair protein RadA;protein_id=WP_240366385.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1390819	1391433	.	-	.	ID=gene-PKHYL_RS07440;Name=PKHYL_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07440;old_locus_tag=PKHYL_17760
NZ_AP019516.1	Protein Homology	CDS	1390819	1391433	.	-	0	ID=cds-WP_071001681.1;Parent=gene-PKHYL_RS07440;Dbxref=Genbank:WP_071001681.1;Name=WP_071001681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198121.1;locus_tag=PKHYL_RS07440;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_071001681.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1392344	1393484	.	-	.	ID=gene-PKHYL_RS07445;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=pseudogene;locus_tag=PKHYL_RS07445;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1392344	1393484	.	-	0	ID=cds-PKHYL_RS07445;Parent=gene-PKHYL_RS07445;Note=frameshifted;Ontology_term=GO:0008360;gbkey=CDS;gene=rodA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513816.1;locus_tag=PKHYL_RS07445;product=rod shape-determining protein RodA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1393830	1394006	.	+	.	ID=gene-PKHYL_RS07450;Name=PKHYL_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07450;old_locus_tag=PKHYL_17790
NZ_AP019516.1	GeneMarkS-2+	CDS	1393830	1394006	.	+	0	ID=cds-WP_240366386.1;Parent=gene-PKHYL_RS07450;Dbxref=Genbank:WP_240366386.1;Name=WP_240366386.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07450;product=hypothetical protein;protein_id=WP_240366386.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1393972	1394436	.	+	.	ID=gene-PKHYL_RS07455;Name=PKHYL_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07455;old_locus_tag=PKHYL_17800
NZ_AP019516.1	GeneMarkS-2+	CDS	1393972	1394436	.	+	0	ID=cds-WP_240366387.1;Parent=gene-PKHYL_RS07455;Dbxref=Genbank:WP_240366387.1;Name=WP_240366387.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07455;product=hypothetical protein;protein_id=WP_240366387.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1394427	1394732	.	+	.	ID=gene-PKHYL_RS07460;Name=PKHYL_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07460;old_locus_tag=PKHYL_17810
NZ_AP019516.1	Protein Homology	CDS	1394427	1394732	.	+	0	ID=cds-WP_240366388.1;Parent=gene-PKHYL_RS07460;Dbxref=Genbank:WP_240366388.1;Name=WP_240366388.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019896.2;locus_tag=PKHYL_RS07460;product=D-Ala-D-Ala carboxypeptidase family metallohydrolase;protein_id=WP_240366388.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1395086	1395556	.	+	.	ID=gene-PKHYL_RS07465;Name=PKHYL_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07465;old_locus_tag=PKHYL_17820
NZ_AP019516.1	GeneMarkS-2+	CDS	1395086	1395556	.	+	0	ID=cds-WP_240366389.1;Parent=gene-PKHYL_RS07465;Dbxref=Genbank:WP_240366389.1;Name=WP_240366389.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07465;product=hypothetical protein;protein_id=WP_240366389.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1395786	1397165	.	-	.	ID=gene-PKHYL_RS07470;Name=PKHYL_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07470;old_locus_tag=PKHYL_17830
NZ_AP019516.1	Protein Homology	CDS	1395786	1397165	.	-	0	ID=cds-WP_240366390.1;Parent=gene-PKHYL_RS07470;Dbxref=Genbank:WP_240366390.1;Name=WP_240366390.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017044.2;locus_tag=PKHYL_RS07470;product=pitrilysin family protein;protein_id=WP_240366390.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1397357	1398857	.	-	.	ID=gene-PKHYL_RS07475;Name=PKHYL_RS07475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07475;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1397357	1398857	.	-	0	ID=cds-PKHYL_RS07475;Parent=gene-PKHYL_RS07475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280209.1;locus_tag=PKHYL_RS07475;product=pitrilysin family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1398922	1399074	.	-	.	ID=gene-PKHYL_RS07480;Name=PKHYL_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07480;old_locus_tag=PKHYL_17880
NZ_AP019516.1	GeneMarkS-2+	CDS	1398922	1399074	.	-	0	ID=cds-WP_186474399.1;Parent=gene-PKHYL_RS07480;Dbxref=Genbank:WP_186474399.1;Name=WP_186474399.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07480;product=hypothetical protein;protein_id=WP_186474399.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1399827	1400737	.	+	.	ID=gene-PKHYL_RS07485;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=pseudogene;locus_tag=PKHYL_RS07485;old_locus_tag=PKHYL_17890;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1399827	1400737	.	+	0	ID=cds-PKHYL_RS07485;Parent=gene-PKHYL_RS07485;Note=frameshifted;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520536.1;locus_tag=PKHYL_RS07485;product=signal recognition particle-docking protein FtsY;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1400792	1401364	.	+	.	ID=gene-PKHYL_RS07490;Name=PKHYL_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07490;old_locus_tag=PKHYL_17900
NZ_AP019516.1	Protein Homology	CDS	1400792	1401364	.	+	0	ID=cds-WP_240366391.1;Parent=gene-PKHYL_RS07490;Dbxref=Genbank:WP_240366391.1;Name=WP_240366391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198134.1;locus_tag=PKHYL_RS07490;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_240366391.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1401479	1402228	.	-	.	ID=gene-PKHYL_RS07495;Name=PKHYL_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07495;old_locus_tag=PKHYL_17910
NZ_AP019516.1	Protein Homology	CDS	1401479	1402228	.	-	0	ID=cds-WP_093070005.1;Parent=gene-PKHYL_RS07495;Dbxref=Genbank:WP_093070005.1;Name=WP_093070005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005062289.1;locus_tag=PKHYL_RS07495;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_093070005.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1402547	1402774	.	+	.	ID=gene-PKHYL_RS07500;Name=PKHYL_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07500;old_locus_tag=PKHYL_17920
NZ_AP019516.1	GeneMarkS-2+	CDS	1402547	1402774	.	+	0	ID=cds-WP_240366392.1;Parent=gene-PKHYL_RS07500;Dbxref=Genbank:WP_240366392.1;Name=WP_240366392.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07500;product=hypothetical protein;protein_id=WP_240366392.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1402719	1403378	.	+	.	ID=gene-PKHYL_RS07505;Name=PKHYL_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07505;old_locus_tag=PKHYL_17930
NZ_AP019516.1	Protein Homology	CDS	1402719	1403378	.	+	0	ID=cds-WP_240366393.1;Parent=gene-PKHYL_RS07505;Dbxref=Genbank:WP_240366393.1;Name=WP_240366393.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012730.2;locus_tag=PKHYL_RS07505;product=ion transporter;protein_id=WP_240366393.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1403415	1404688	.	-	.	ID=gene-PKHYL_RS07510;Name=PKHYL_RS07510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07510;old_locus_tag=PKHYL_17940;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1403415	1404688	.	-	0	ID=cds-PKHYL_RS07510;Parent=gene-PKHYL_RS07510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501656.1;locus_tag=PKHYL_RS07510;product=AarF/ABC1/UbiB kinase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1404857	1405393	.	-	.	ID=gene-PKHYL_RS07515;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=PKHYL_RS07515;old_locus_tag=PKHYL_17950
NZ_AP019516.1	Protein Homology	CDS	1404857	1405393	.	-	0	ID=cds-WP_093070019.1;Parent=gene-PKHYL_RS07515;Dbxref=Genbank:WP_093070019.1;Name=WP_093070019.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198372.1;locus_tag=PKHYL_RS07515;product=type II 3-dehydroquinate dehydratase;protein_id=WP_093070019.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1405811	1406025	.	+	.	ID=gene-PKHYL_RS07520;Name=PKHYL_RS07520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07520;old_locus_tag=PKHYL_17960;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1405811	1406025	.	+	0	ID=cds-PKHYL_RS07520;Parent=gene-PKHYL_RS07520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513806.1;locus_tag=PKHYL_RS07520;product=cold-shock protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1406304	1407457	.	+	.	ID=gene-PKHYL_RS07525;Name=PKHYL_RS07525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07525;old_locus_tag=PKHYL_17970;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1406304	1407457	.	+	0	ID=cds-PKHYL_RS07525;Parent=gene-PKHYL_RS07525;Note=frameshifted;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198377.1;locus_tag=PKHYL_RS07525;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1407571	1408447	.	-	.	ID=gene-PKHYL_RS07530;Name=PKHYL_RS07530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07530;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1407571	1408447	.	-	0	ID=cds-PKHYL_RS07530;Parent=gene-PKHYL_RS07530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280220.1;locus_tag=PKHYL_RS07530;product=sulfite exporter TauE/SafE family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1408547	1408822	.	-	.	ID=gene-PKHYL_RS07535;Name=ccoS;gbkey=Gene;gene=ccoS;gene_biotype=protein_coding;locus_tag=PKHYL_RS07535;old_locus_tag=PKHYL_18000
NZ_AP019516.1	Protein Homology	CDS	1408547	1408822	.	-	0	ID=cds-WP_058024050.1;Parent=gene-PKHYL_RS07535;Dbxref=Genbank:WP_058024050.1;Name=WP_058024050.1;Ontology_term=GO:0008535;gbkey=CDS;gene=ccoS;go_process=respiratory chain complex IV assembly|0008535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198404.1;locus_tag=PKHYL_RS07535;product=cbb3-type cytochrome oxidase assembly protein CcoS;protein_id=WP_058024050.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1408952	1409680	.	-	.	ID=gene-PKHYL_RS07540;Name=PKHYL_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07540;old_locus_tag=PKHYL_18010
NZ_AP019516.1	Protein Homology	CDS	1408952	1409680	.	-	0	ID=cds-WP_227674276.1;Parent=gene-PKHYL_RS07540;Dbxref=Genbank:WP_227674276.1;Name=WP_227674276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443628.1;locus_tag=PKHYL_RS07540;product=YdcF family protein;protein_id=WP_227674276.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1409715	1410824	.	-	.	ID=gene-PKHYL_RS07545;Name=murB;gbkey=Gene;gene=murB;gene_biotype=pseudogene;locus_tag=PKHYL_RS07545;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1409715	1410824	.	-	0	ID=cds-PKHYL_RS07545;Parent=gene-PKHYL_RS07545;Note=frameshifted;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280223.1;locus_tag=PKHYL_RS07545;product=UDP-N-acetylmuramate dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1411062	1411560	.	-	.	ID=gene-PKHYL_RS07550;Name=PKHYL_RS07550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07550;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1411062	1411560	.	-	0	ID=cds-PKHYL_RS07550;Parent=gene-PKHYL_RS07550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198409.1;locus_tag=PKHYL_RS07550;product=low molecular weight phosphotyrosine protein phosphatase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1411767	1412190	.	-	.	ID=gene-PKHYL_RS07555;Name=PKHYL_RS07555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07555;old_locus_tag=PKHYL_18050;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1411767	1412190	.	-	0	ID=cds-PKHYL_RS07555;Parent=gene-PKHYL_RS07555;Note=frameshifted;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393926.1;locus_tag=PKHYL_RS07555;product=S4 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1412362	1413913	.	-	.	ID=gene-PKHYL_RS07560;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=pseudogene;locus_tag=PKHYL_RS07560;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1412362	1413913	.	-	0	ID=cds-PKHYL_RS07560;Parent=gene-PKHYL_RS07560;Note=frameshifted;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005286113.1;locus_tag=PKHYL_RS07560;product=threonine ammonia-lyase%2C biosynthetic;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1414202	1414860	.	+	.	ID=gene-PKHYL_RS07565;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=pseudogene;locus_tag=PKHYL_RS07565;old_locus_tag=PKHYL_18090;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1414202	1414860	.	+	0	ID=cds-PKHYL_RS07565;Parent=gene-PKHYL_RS07565;Note=frameshifted;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513793.1;locus_tag=PKHYL_RS07565;product=ribose-5-phosphate isomerase RpiA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1414980	1415901	.	-	.	ID=gene-PKHYL_RS07570;Name=argF;gbkey=Gene;gene=argF;gene_biotype=pseudogene;locus_tag=PKHYL_RS07570;old_locus_tag=PKHYL_18100;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1414980	1415901	.	-	0	ID=cds-PKHYL_RS07570;Parent=gene-PKHYL_RS07570;Note=frameshifted;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658302.1;locus_tag=PKHYL_RS07570;product=ornithine carbamoyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1416118	1417224	.	-	.	ID=gene-PKHYL_RS07575;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=PKHYL_RS07575;old_locus_tag=PKHYL_18110
NZ_AP019516.1	Protein Homology	CDS	1416118	1417224	.	-	0	ID=cds-WP_071001654.1;Parent=gene-PKHYL_RS07575;Dbxref=Genbank:WP_071001654.1;Name=WP_071001654.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198428.1;locus_tag=PKHYL_RS07575;product=alanine racemase;protein_id=WP_071001654.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1417388	1418792	.	-	.	ID=gene-PKHYL_RS07580;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=pseudogene;locus_tag=PKHYL_RS07580;old_locus_tag=PKHYL_18120;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1417388	1418792	.	-	0	ID=cds-PKHYL_RS07580;Parent=gene-PKHYL_RS07580;Note=frameshifted;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198448.1;locus_tag=PKHYL_RS07580;product=replicative DNA helicase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1419091	1420174	.	+	.	ID=gene-PKHYL_RS07585;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=pseudogene;locus_tag=PKHYL_RS07585;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1419091	1420174	.	+	0	ID=cds-PKHYL_RS07585;Parent=gene-PKHYL_RS07585;Note=frameshifted;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280235.1;locus_tag=PKHYL_RS07585;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1420523	1420975	.	+	.	ID=gene-PKHYL_RS07590;Name=merR;gbkey=Gene;gene=merR;gene_biotype=protein_coding;locus_tag=PKHYL_RS07590;old_locus_tag=PKHYL_18160
NZ_AP019516.1	Protein Homology	CDS	1420523	1420975	.	+	0	ID=cds-WP_008110844.1;Parent=gene-PKHYL_RS07590;Dbxref=Genbank:WP_008110844.1;Name=WP_008110844.1;Ontology_term=GO:0001228;gbkey=CDS;gene=merR;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008110844.1;locus_tag=PKHYL_RS07590;product=Hg(II)-responsive transcriptional regulator;protein_id=WP_008110844.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1421149	1421507	.	+	.	ID=gene-PKHYL_RS07595;Name=PKHYL_RS07595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07595;old_locus_tag=PKHYL_18170;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1421149	1421507	.	+	0	ID=cds-PKHYL_RS07595;Parent=gene-PKHYL_RS07595;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008110845.1;locus_tag=PKHYL_RS07595;product=mercuric transporter MerT family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1421554	1421838	.	+	.	ID=gene-PKHYL_RS07600;Name=merP;gbkey=Gene;gene=merP;gene_biotype=protein_coding;locus_tag=PKHYL_RS07600;old_locus_tag=PKHYL_18180
NZ_AP019516.1	Protein Homology	CDS	1421554	1421838	.	+	0	ID=cds-WP_008110847.1;Parent=gene-PKHYL_RS07600;Dbxref=Genbank:WP_008110847.1;Name=WP_008110847.1;Ontology_term=GO:0045340;gbkey=CDS;gene=merP;go_function=mercury ion binding|0045340||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008110847.1;locus_tag=PKHYL_RS07600;product=mercury resistance system periplasmic binding protein MerP;protein_id=WP_008110847.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1421910	1422257	.	+	.	ID=gene-PKHYL_RS07605;Name=merC;gbkey=Gene;gene=merC;gene_biotype=protein_coding;locus_tag=PKHYL_RS07605;old_locus_tag=PKHYL_18190
NZ_AP019516.1	Protein Homology	CDS	1421910	1422257	.	+	0	ID=cds-WP_240366394.1;Parent=gene-PKHYL_RS07605;Dbxref=Genbank:WP_240366394.1;Name=WP_240366394.1;gbkey=CDS;gene=merC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008110850.1;locus_tag=PKHYL_RS07605;product=organomercurial transporter MerC;protein_id=WP_240366394.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1422277	1423714	.	+	.	ID=gene-PKHYL_RS07610;Name=merA;gbkey=Gene;gene=merA;gene_biotype=pseudogene;locus_tag=PKHYL_RS07610;old_locus_tag=PKHYL_18200;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1422277	1423714	.	+	0	ID=cds-PKHYL_RS07610;Parent=gene-PKHYL_RS07610;Note=frameshifted;Ontology_term=GO:0016152;gbkey=CDS;gene=merA;go_function=mercury (II) reductase activity|0016152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008110852.1;locus_tag=PKHYL_RS07610;product=mercury(II) reductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1423769	1423951	.	-	.	ID=gene-PKHYL_RS07620;Name=PKHYL_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07620;old_locus_tag=PKHYL_18220
NZ_AP019516.1	GeneMarkS-2+	CDS	1423769	1423951	.	-	0	ID=cds-WP_071001648.1;Parent=gene-PKHYL_RS07620;Dbxref=Genbank:WP_071001648.1;Name=WP_071001648.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07620;product=hypothetical protein;protein_id=WP_071001648.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1424310	1424809	.	-	.	ID=gene-PKHYL_RS07625;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=pseudogene;locus_tag=PKHYL_RS07625;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1424310	1424809	.	-	0	ID=cds-PKHYL_RS07625;Parent=gene-PKHYL_RS07625;Note=frameshifted%3B internal stop;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672266.1;locus_tag=PKHYL_RS07625;product=signal peptidase II;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1425165	1425815	.	-	.	ID=gene-PKHYL_RS07630;Name=PKHYL_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07630;old_locus_tag=PKHYL_18240
NZ_AP019516.1	Protein Homology	CDS	1425165	1425815	.	-	0	ID=cds-WP_212564466.1;Parent=gene-PKHYL_RS07630;Dbxref=Genbank:WP_212564466.1;Name=WP_212564466.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_071001643.1;locus_tag=PKHYL_RS07630;product=IS1595-like element ISPssp3 family transposase;protein_id=WP_212564466.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1426019	1426699	.	-	.	ID=gene-PKHYL_RS07635;Name=PKHYL_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07635;old_locus_tag=PKHYL_18250
NZ_AP019516.1	Protein Homology	CDS	1426019	1426699	.	-	0	ID=cds-WP_230710349.1;Parent=gene-PKHYL_RS07635;Dbxref=Genbank:WP_230710349.1;Name=WP_230710349.1;Ontology_term=GO:0015288;gbkey=CDS;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004777760.1;locus_tag=PKHYL_RS07635;product=TorF family putative porin;protein_id=WP_230710349.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1427111	1427338	.	-	.	ID=gene-PKHYL_RS07640;Name=PKHYL_RS07640;end_range=1427338,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07640;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1427111	1427338	.	-	0	ID=cds-PKHYL_RS07640;Parent=gene-PKHYL_RS07640;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1427338,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005017146.1;locus_tag=PKHYL_RS07640;partial=true;product=threonine synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1427391	1428041	.	-	.	ID=gene-PKHYL_RS07645;Name=PKHYL_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07645;old_locus_tag=PKHYL_18260
NZ_AP019516.1	Protein Homology	CDS	1427391	1428041	.	-	0	ID=cds-WP_071001643.1;Parent=gene-PKHYL_RS07645;Dbxref=Genbank:WP_071001643.1;Name=WP_071001643.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_071001643.1;locus_tag=PKHYL_RS07645;product=IS1595-like element ISPssp3 family transposase;protein_id=WP_071001643.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1428097	1428300	.	+	.	ID=gene-PKHYL_RS07650;Name=PKHYL_RS07650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07650;old_locus_tag=PKHYL_18270;partial=true;pseudo=true;start_range=.,1428097
NZ_AP019516.1	Protein Homology	CDS	1428097	1428300	.	+	0	ID=cds-PKHYL_RS07650;Parent=gene-PKHYL_RS07650;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558045.1;locus_tag=PKHYL_RS07650;partial=true;product=transposase;pseudo=true;start_range=.,1428097;transl_table=11
NZ_AP019516.1	RefSeq	gene	1428414	1428866	.	+	.	ID=gene-PKHYL_RS07655;Name=PKHYL_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07655;old_locus_tag=PKHYL_18280
NZ_AP019516.1	Protein Homology	CDS	1428414	1428866	.	+	0	ID=cds-WP_269778295.1;Parent=gene-PKHYL_RS07655;Dbxref=Genbank:WP_269778295.1;Name=WP_269778295.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022853.2;locus_tag=PKHYL_RS07655;product=protein-disulfide reductase DsbD family protein;protein_id=WP_269778295.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1428824	1430581	.	+	.	ID=gene-PKHYL_RS07660;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=PKHYL_RS07660;old_locus_tag=PKHYL_18290
NZ_AP019516.1	Protein Homology	CDS	1428824	1430581	.	+	0	ID=cds-WP_269778296.1;Parent=gene-PKHYL_RS07660;Dbxref=Genbank:WP_269778296.1;Name=WP_269778296.1;Ontology_term=GO:0047134;gbkey=CDS;gene=dsbD;go_function=protein-disulfide reductase (NAD(P)) activity|0047134||IEA;inference=COORDINATES: protein motif:HMM:NF001419.0;locus_tag=PKHYL_RS07660;product=protein-disulfide reductase DsbD;protein_id=WP_269778296.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1430786	1431667	.	-	.	ID=gene-PKHYL_RS07665;Name=PKHYL_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07665;old_locus_tag=PKHYL_18300
NZ_AP019516.1	Protein Homology	CDS	1430786	1431667	.	-	0	ID=cds-WP_071001640.1;Parent=gene-PKHYL_RS07665;Dbxref=Genbank:WP_071001640.1;Name=WP_071001640.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558045.1;locus_tag=PKHYL_RS07665;product=IS982 family transposase;protein_id=WP_071001640.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1431795	1432631	.	+	.	ID=gene-PKHYL_RS07670;Name=PKHYL_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07670;old_locus_tag=PKHYL_18310
NZ_AP019516.1	Protein Homology	CDS	1431795	1432631	.	+	0	ID=cds-WP_102091635.1;Parent=gene-PKHYL_RS07670;Dbxref=Genbank:WP_102091635.1;Name=WP_102091635.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015815822.1;locus_tag=PKHYL_RS07670;product=cation transporter;protein_id=WP_102091635.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1432692	1432835	.	+	.	ID=gene-PKHYL_RS07675;Name=PKHYL_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07675
NZ_AP019516.1	GeneMarkS-2+	CDS	1432692	1432835	.	+	0	ID=cds-WP_178377961.1-2;Parent=gene-PKHYL_RS07675;Dbxref=Genbank:WP_178377961.1;Name=WP_178377961.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07675;product=hypothetical protein;protein_id=WP_178377961.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1433215	1434069	.	+	.	ID=gene-PKHYL_RS07680;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=PKHYL_RS07680;old_locus_tag=PKHYL_18320
NZ_AP019516.1	Protein Homology	CDS	1433215	1434069	.	+	0	ID=cds-WP_071001639.1;Parent=gene-PKHYL_RS07680;Dbxref=Genbank:WP_071001639.1;Name=WP_071001639.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443615.1;locus_tag=PKHYL_RS07680;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_071001639.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1434121	1434958	.	+	.	ID=gene-PKHYL_RS07685;Name=PKHYL_RS07685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07685;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1434121	1434958	.	+	0	ID=cds-PKHYL_RS07685;Parent=gene-PKHYL_RS07685;Note=frameshifted%3B internal stop;Ontology_term=GO:0008803;gbkey=CDS;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393785.1;locus_tag=PKHYL_RS07685;product=symmetrical bis(5'-nucleosyl)-tetraphosphatase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1435256	1435912	.	-	.	ID=gene-PKHYL_RS07690;Name=PKHYL_RS07690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07690;old_locus_tag=PKHYL_18350;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1435256	1435912	.	-	0	ID=cds-PKHYL_RS07690;Parent=gene-PKHYL_RS07690;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611454.1;locus_tag=PKHYL_RS07690;product=IS1595 family transposase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1435934	1436275	.	-	.	ID=gene-PKHYL_RS17400;Name=PKHYL_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17400;old_locus_tag=PKHYL_18360
NZ_AP019516.1	Protein Homology	CDS	1435934	1436275	.	-	0	ID=cds-WP_269778297.1;Parent=gene-PKHYL_RS17400;Dbxref=Genbank:WP_269778297.1;Name=WP_269778297.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016807.2;locus_tag=PKHYL_RS17400;product=hypothetical protein;protein_id=WP_269778297.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1436746	1437792	.	-	.	ID=gene-PKHYL_RS07700;Name=PKHYL_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07700;old_locus_tag=PKHYL_18380
NZ_AP019516.1	Protein Homology	CDS	1436746	1437792	.	-	0	ID=cds-WP_240366395.1;Parent=gene-PKHYL_RS07700;Dbxref=Genbank:WP_240366395.1;Name=WP_240366395.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021639.2;locus_tag=PKHYL_RS07700;product=site-specific recombinase;protein_id=WP_240366395.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1437755	1439188	.	-	.	ID=gene-PKHYL_RS07705;Name=PKHYL_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07705;old_locus_tag=PKHYL_18390
NZ_AP019516.1	Protein Homology	CDS	1437755	1439188	.	-	0	ID=cds-WP_240366396.1;Parent=gene-PKHYL_RS07705;Dbxref=Genbank:WP_240366396.1;Name=WP_240366396.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021639.2;locus_tag=PKHYL_RS07705;product=site-specific recombinase;protein_id=WP_240366396.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1439421	1441200	.	-	.	ID=gene-PKHYL_RS07710;Name=PKHYL_RS07710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07710;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1439421	1441200	.	-	0	ID=cds-PKHYL_RS07710;Parent=gene-PKHYL_RS07710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513784.1;locus_tag=PKHYL_RS07710;product=acyl-CoA dehydrogenase C-terminal domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1441531	1443321	.	-	.	ID=gene-PKHYL_RS07715;Name=PKHYL_RS07715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07715;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1441531	1443321	.	-	0	ID=cds-PKHYL_RS07715;Parent=gene-PKHYL_RS07715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280240.1;locus_tag=PKHYL_RS07715;product=acyl-CoA dehydrogenase C-terminal domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1443816	1444253	.	-	.	ID=gene-PKHYL_RS17405;Name=PKHYL_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17405;old_locus_tag=PKHYL_18470
NZ_AP019516.1	Protein Homology	CDS	1443816	1444253	.	-	0	ID=cds-WP_269778298.1;Parent=gene-PKHYL_RS17405;Dbxref=Genbank:WP_269778298.1;Name=WP_269778298.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.2;locus_tag=PKHYL_RS17405;product=EAL domain-containing protein;protein_id=WP_269778298.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1444262	1445368	.	-	.	ID=gene-PKHYL_RS17410;Name=PKHYL_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17410;old_locus_tag=PKHYL_18480
NZ_AP019516.1	Protein Homology	CDS	1444262	1445368	.	-	0	ID=cds-WP_269778299.1;Parent=gene-PKHYL_RS17410;Dbxref=Genbank:WP_269778299.1;Name=WP_269778299.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=PKHYL_RS17410;product=EAL domain-containing protein;protein_id=WP_269778299.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1445302	1445526	.	-	.	ID=gene-PKHYL_RS07725;Name=PKHYL_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07725
NZ_AP019516.1	GeneMarkS-2+	CDS	1445302	1445526	.	-	0	ID=cds-WP_240366397.1;Parent=gene-PKHYL_RS07725;Dbxref=Genbank:WP_240366397.1;Name=WP_240366397.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07725;product=hypothetical protein;protein_id=WP_240366397.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1445687	1446555	.	-	.	ID=gene-PKHYL_RS07730;Name=PKHYL_RS07730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07730;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1445687	1446555	.	-	0	ID=cds-PKHYL_RS07730;Parent=gene-PKHYL_RS07730;Note=frameshifted;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201955.1;locus_tag=PKHYL_RS07730;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1446852	1447701	.	-	.	ID=gene-PKHYL_RS07735;Name=metF;gbkey=Gene;gene=metF;gene_biotype=pseudogene;locus_tag=PKHYL_RS07735;old_locus_tag=PKHYL_18510;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1446852	1447701	.	-	0	ID=cds-PKHYL_RS07735;Parent=gene-PKHYL_RS07735;Note=frameshifted;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960184.1;locus_tag=PKHYL_RS07735;product=methylenetetrahydrofolate reductase [NAD(P)H];pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1447715	1449138	.	-	.	ID=gene-PKHYL_RS07740;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=pseudogene;locus_tag=PKHYL_RS07740;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1447715	1449138	.	-	0	ID=cds-PKHYL_RS07740;Parent=gene-PKHYL_RS07740;Note=frameshifted;Ontology_term=GO:0006730,GO:0004013;gbkey=CDS;gene=ahcY;go_function=adenosylhomocysteinase activity|0004013||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443608.1;locus_tag=PKHYL_RS07740;product=adenosylhomocysteinase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1449474	1450094	.	-	.	ID=gene-PKHYL_RS07745;Name=PKHYL_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07745
NZ_AP019516.1	Protein Homology	CDS	1449474	1450094	.	-	0	ID=cds-WP_240366508.1;Parent=gene-PKHYL_RS07745;Dbxref=Genbank:WP_240366508.1;Name=WP_240366508.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=PKHYL_RS07745;product=TonB-dependent receptor;protein_id=WP_240366508.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1449992	1451089	.	-	.	ID=gene-PKHYL_RS07750;Name=PKHYL_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07750;old_locus_tag=PKHYL_18550
NZ_AP019516.1	Protein Homology	CDS	1449992	1451089	.	-	0	ID=cds-WP_240366398.1;Parent=gene-PKHYL_RS07750;Dbxref=Genbank:WP_240366398.1;Name=WP_240366398.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019335.2;locus_tag=PKHYL_RS07750;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_240366398.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1451043	1451387	.	-	.	ID=gene-PKHYL_RS07755;Name=PKHYL_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07755;old_locus_tag=PKHYL_18560
NZ_AP019516.1	GeneMarkS-2+	CDS	1451043	1451387	.	-	0	ID=cds-WP_240366399.1;Parent=gene-PKHYL_RS07755;Dbxref=Genbank:WP_240366399.1;Name=WP_240366399.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07755;product=hypothetical protein;protein_id=WP_240366399.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1451871	1453706	.	+	.	ID=gene-PKHYL_RS07760;Name=PKHYL_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07760;old_locus_tag=PKHYL_18570
NZ_AP019516.1	Protein Homology	CDS	1451871	1453706	.	+	0	ID=cds-WP_240366400.1;Parent=gene-PKHYL_RS07760;Dbxref=Genbank:WP_240366400.1;Name=WP_240366400.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443606.1;locus_tag=PKHYL_RS07760;product=mechanosensitive ion channel family protein;protein_id=WP_240366400.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1453793	1454077	.	-	.	ID=gene-PKHYL_RS07765;Name=PKHYL_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07765;old_locus_tag=PKHYL_18580
NZ_AP019516.1	GeneMarkS-2+	CDS	1453793	1454077	.	-	0	ID=cds-WP_240366401.1;Parent=gene-PKHYL_RS07765;Dbxref=Genbank:WP_240366401.1;Name=WP_240366401.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07765;product=hypothetical protein;protein_id=WP_240366401.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1454113	1454424	.	-	.	ID=gene-PKHYL_RS07770;Name=PKHYL_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07770;old_locus_tag=PKHYL_18590
NZ_AP019516.1	GeneMarkS-2+	CDS	1454113	1454424	.	-	0	ID=cds-WP_240366402.1;Parent=gene-PKHYL_RS07770;Dbxref=Genbank:WP_240366402.1;Name=WP_240366402.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07770;product=hypothetical protein;protein_id=WP_240366402.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1454596	1455326	.	-	.	ID=gene-PKHYL_RS07775;Name=PKHYL_RS07775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07775;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1454596	1455326	.	-	0	ID=cds-PKHYL_RS07775;Parent=gene-PKHYL_RS07775;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443604.1;locus_tag=PKHYL_RS07775;product=Smr/MutS family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1455434	1456309	.	-	.	ID=gene-PKHYL_RS07780;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=PKHYL_RS07780;old_locus_tag=PKHYL_18630
NZ_AP019516.1	Protein Homology	CDS	1455434	1456309	.	-	0	ID=cds-WP_240366403.1;Parent=gene-PKHYL_RS07780;Dbxref=Genbank:WP_240366403.1;Name=WP_240366403.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443603.1;locus_tag=PKHYL_RS07780;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_240366403.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1456382	1457504	.	-	.	ID=gene-PKHYL_RS07785;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=pseudogene;locus_tag=PKHYL_RS07785;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1456382	1457504	.	-	0	ID=cds-PKHYL_RS07785;Parent=gene-PKHYL_RS07785;Note=frameshifted;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201937.1;locus_tag=PKHYL_RS07785;product=anthranilate phosphoribosyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1457622	1458245	.	-	.	ID=gene-PKHYL_RS07790;Name=PKHYL_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07790;old_locus_tag=PKHYL_18660
NZ_AP019516.1	Protein Homology	CDS	1457622	1458245	.	-	0	ID=cds-WP_071001624.1;Parent=gene-PKHYL_RS07790;Dbxref=Genbank:WP_071001624.1;Name=WP_071001624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513772.1;locus_tag=PKHYL_RS07790;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_071001624.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1459057	1460468	.	+	.	ID=gene-PKHYL_RS07795;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=pseudogene;locus_tag=PKHYL_RS07795;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1459057	1460468	.	+	0	ID=cds-PKHYL_RS07795;Parent=gene-PKHYL_RS07795;Note=frameshifted;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657911.1;locus_tag=PKHYL_RS07795;product=type I glutamate--ammonia ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1460691	1461383	.	+	.	ID=gene-PKHYL_RS07800;Name=PKHYL_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07800;old_locus_tag=PKHYL_18700
NZ_AP019516.1	Protein Homology	CDS	1460691	1461383	.	+	0	ID=cds-WP_071001622.1;Parent=gene-PKHYL_RS07800;Dbxref=Genbank:WP_071001622.1;Name=WP_071001622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201932.1;locus_tag=PKHYL_RS07800;product=DUF4124 domain-containing protein;protein_id=WP_071001622.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1461490	1462206	.	-	.	ID=gene-PKHYL_RS07805;Name=PKHYL_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07805;old_locus_tag=PKHYL_18710
NZ_AP019516.1	Protein Homology	CDS	1461490	1462206	.	-	0	ID=cds-WP_071001621.1;Parent=gene-PKHYL_RS07805;Dbxref=Genbank:WP_071001621.1;Name=WP_071001621.1;Note=The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26%2C from Brucella%2C was shown to assemble into a channel-like structure%2C while YggE from E. coli has been associated with resistance to oxidative stress.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443599.1;locus_tag=PKHYL_RS07805;product=SIMPL domain-containing protein;protein_id=WP_071001621.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1462460	1462556	.	+	.	ID=gene-PKHYL_RS07810;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=PKHYL_RS07810
NZ_AP019516.1	cmsearch	SRP_RNA	1462460	1462556	.	+	.	ID=rna-PKHYL_RS07810;Parent=gene-PKHYL_RS07810;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS07810;product=signal recognition particle sRNA small type
NZ_AP019516.1	cmsearch	exon	1462460	1462556	.	+	.	ID=exon-PKHYL_RS07810-1;Parent=rna-PKHYL_RS07810;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS07810;product=signal recognition particle sRNA small type
NZ_AP019516.1	RefSeq	gene	1462766	1463362	.	+	.	ID=gene-PKHYL_RS07815;Name=PKHYL_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07815;old_locus_tag=PKHYL_18720
NZ_AP019516.1	Protein Homology	CDS	1462766	1463362	.	+	0	ID=cds-WP_071001620.1;Parent=gene-PKHYL_RS07815;Dbxref=Genbank:WP_071001620.1;Name=WP_071001620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201928.1;locus_tag=PKHYL_RS07815;product=LemA family protein;protein_id=WP_071001620.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1463402	1463680	.	+	.	ID=gene-PKHYL_RS07820;Name=PKHYL_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07820;old_locus_tag=PKHYL_18730
NZ_AP019516.1	GeneMarkS-2+	CDS	1463402	1463680	.	+	0	ID=cds-WP_240366404.1;Parent=gene-PKHYL_RS07820;Dbxref=Genbank:WP_240366404.1;Name=WP_240366404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07820;product=hypothetical protein;protein_id=WP_240366404.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1463643	1464614	.	+	.	ID=gene-PKHYL_RS07825;Name=PKHYL_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07825;old_locus_tag=PKHYL_18740
NZ_AP019516.1	Protein Homology	CDS	1463643	1464614	.	+	0	ID=cds-WP_240366405.1;Parent=gene-PKHYL_RS07825;Dbxref=Genbank:WP_240366405.1;Name=WP_240366405.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013594.2;locus_tag=PKHYL_RS07825;product=M48 family metalloprotease;protein_id=WP_240366405.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1464601	1464906	.	+	.	ID=gene-PKHYL_RS07830;Name=PKHYL_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07830;old_locus_tag=PKHYL_18750
NZ_AP019516.1	GeneMarkS-2+	CDS	1464601	1464906	.	+	0	ID=cds-WP_240366406.1;Parent=gene-PKHYL_RS07830;Dbxref=Genbank:WP_240366406.1;Name=WP_240366406.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07830;product=hypothetical protein;protein_id=WP_240366406.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1464878	1466431	.	+	.	ID=gene-PKHYL_RS07835;Name=PKHYL_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07835;old_locus_tag=PKHYL_18760
NZ_AP019516.1	GeneMarkS-2+	CDS	1464878	1466431	.	+	0	ID=cds-WP_240366407.1;Parent=gene-PKHYL_RS07835;Dbxref=Genbank:WP_240366407.1;Name=WP_240366407.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07835;product=hypothetical protein;protein_id=WP_240366407.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1466446	1467336	.	+	.	ID=gene-PKHYL_RS07840;Name=PKHYL_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07840;old_locus_tag=PKHYL_18770
NZ_AP019516.1	Protein Homology	CDS	1466446	1467336	.	+	0	ID=cds-WP_071001618.1;Parent=gene-PKHYL_RS07840;Dbxref=Genbank:WP_071001618.1;Name=WP_071001618.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201925.1;locus_tag=PKHYL_RS07840;product=DNA polymerase III subunit psi;protein_id=WP_071001618.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1467428	1468582	.	+	.	ID=gene-PKHYL_RS07845;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=PKHYL_RS07845;old_locus_tag=PKHYL_18780
NZ_AP019516.1	Protein Homology	CDS	1467428	1468582	.	+	0	ID=cds-WP_240366408.1;Parent=gene-PKHYL_RS07845;Dbxref=Genbank:WP_240366408.1;Name=WP_240366408.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960654.1;locus_tag=PKHYL_RS07845;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_240366408.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1468861	1470692	.	+	.	ID=gene-PKHYL_RS07850;Name=PKHYL_RS07850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07850;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1468861	1470692	.	+	0	ID=cds-PKHYL_RS07850;Parent=gene-PKHYL_RS07850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280312.1;locus_tag=PKHYL_RS07850;product=extracellular solute-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1470839	1471618	.	+	.	ID=gene-PKHYL_RS07855;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=PKHYL_RS07855;old_locus_tag=PKHYL_18810
NZ_AP019516.1	Protein Homology	CDS	1470839	1471618	.	+	0	ID=cds-WP_212563525.1;Parent=gene-PKHYL_RS07855;Dbxref=Genbank:WP_212563525.1;Name=WP_212563525.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443594.1;locus_tag=PKHYL_RS07855;product=hydroxyacylglutathione hydrolase;protein_id=WP_212563525.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1471720	1472789	.	+	.	ID=gene-PKHYL_RS07860;Name=yejB;gbkey=Gene;gene=yejB;gene_biotype=pseudogene;locus_tag=PKHYL_RS07860;old_locus_tag=PKHYL_18830;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1471720	1472789	.	+	0	ID=cds-PKHYL_RS07860;Parent=gene-PKHYL_RS07860;Note=frameshifted;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=yejB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513762.1;locus_tag=PKHYL_RS07860;product=microcin C ABC transporter permease YejB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1472852	1473911	.	+	.	ID=gene-PKHYL_RS07865;Name=PKHYL_RS07865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07865;old_locus_tag=PKHYL_18840;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1472852	1473911	.	+	0	ID=cds-PKHYL_RS07865;Parent=gene-PKHYL_RS07865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443593.1;locus_tag=PKHYL_RS07865;product=ABC transporter permease;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1473928	1475595	.	+	.	ID=gene-PKHYL_RS07870;Name=PKHYL_RS07870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07870;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1473928	1475595	.	+	0	ID=cds-PKHYL_RS07870;Parent=gene-PKHYL_RS07870;Note=frameshifted;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443592.1;locus_tag=PKHYL_RS07870;product=dipeptide ABC transporter ATP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1475779	1475940	.	+	.	ID=gene-PKHYL_RS07875;Name=PKHYL_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07875;old_locus_tag=PKHYL_18880
NZ_AP019516.1	GeneMarkS-2+	CDS	1475779	1475940	.	+	0	ID=cds-WP_240366409.1;Parent=gene-PKHYL_RS07875;Dbxref=Genbank:WP_240366409.1;Name=WP_240366409.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07875;product=hypothetical protein;protein_id=WP_240366409.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1475954	1476724	.	+	.	ID=gene-PKHYL_RS07880;Name=PKHYL_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07880;old_locus_tag=PKHYL_18890
NZ_AP019516.1	Protein Homology	CDS	1475954	1476724	.	+	0	ID=cds-WP_269778300.1;Parent=gene-PKHYL_RS07880;Dbxref=Genbank:WP_269778300.1;Name=WP_269778300.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF012678.2;locus_tag=PKHYL_RS07880;product=iron-containing alcohol dehydrogenase;protein_id=WP_269778300.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1476690	1477085	.	+	.	ID=gene-PKHYL_RS17415;Name=PKHYL_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17415;old_locus_tag=PKHYL_18900
NZ_AP019516.1	Protein Homology	CDS	1476690	1477085	.	+	0	ID=cds-WP_269778301.1;Parent=gene-PKHYL_RS17415;Dbxref=Genbank:WP_269778301.1;Name=WP_269778301.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF012678.2;locus_tag=PKHYL_RS17415;product=iron-containing alcohol dehydrogenase;protein_id=WP_269778301.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1477558	1478155	.	-	.	ID=gene-PKHYL_RS07885;Name=folE;gbkey=Gene;gene=folE;gene_biotype=pseudogene;locus_tag=PKHYL_RS07885;old_locus_tag=PKHYL_18910;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1477558	1478155	.	-	0	ID=cds-PKHYL_RS07885;Parent=gene-PKHYL_RS07885;Note=frameshifted;Ontology_term=GO:0042559,GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=pteridine-containing compound biosynthetic process|0042559||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196233.1;locus_tag=PKHYL_RS07885;product=GTP cyclohydrolase I FolE;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1478535	1479349	.	+	.	ID=gene-PKHYL_RS07890;Name=PKHYL_RS07890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07890;old_locus_tag=PKHYL_18930;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1478535	1479349	.	+	0	ID=cds-PKHYL_RS07890;Parent=gene-PKHYL_RS07890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196229.1;locus_tag=PKHYL_RS07890;product=enoyl-ACP reductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1479486	1479662	.	+	.	ID=gene-PKHYL_RS07895;Name=PKHYL_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07895
NZ_AP019516.1	GeneMarkS-2+	CDS	1479486	1479662	.	+	0	ID=cds-WP_240366410.1;Parent=gene-PKHYL_RS07895;Dbxref=Genbank:WP_240366410.1;Name=WP_240366410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07895;product=DUF1275 domain-containing protein;protein_id=WP_240366410.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1479688	1480107	.	+	.	ID=gene-PKHYL_RS07900;Name=PKHYL_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07900;old_locus_tag=PKHYL_18940
NZ_AP019516.1	Protein Homology	CDS	1479688	1480107	.	+	0	ID=cds-WP_240366411.1;Parent=gene-PKHYL_RS07900;Dbxref=Genbank:WP_240366411.1;Name=WP_240366411.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018604.2;locus_tag=PKHYL_RS07900;product=YoaK family protein;protein_id=WP_240366411.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1480255	1480383	.	-	.	ID=gene-PKHYL_RS17420;Name=PKHYL_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17420;old_locus_tag=PKHYL_18950
NZ_AP019516.1	Protein Homology	CDS	1480255	1480383	.	-	0	ID=cds-WP_269778302.1;Parent=gene-PKHYL_RS17420;Dbxref=Genbank:WP_269778302.1;Name=WP_269778302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960227.1;locus_tag=PKHYL_RS17420;product=hypothetical protein;protein_id=WP_269778302.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1480807	1482247	.	+	.	ID=gene-PKHYL_RS07905;Name=PKHYL_RS07905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07905;old_locus_tag=PKHYL_18970;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1480807	1482247	.	+	0	ID=cds-PKHYL_RS07905;Parent=gene-PKHYL_RS07905;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443587.1;locus_tag=PKHYL_RS07905;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1483112	1483699	.	+	.	ID=gene-PKHYL_RS07910;Name=PKHYL_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07910;old_locus_tag=PKHYL_18980
NZ_AP019516.1	Protein Homology	CDS	1483112	1483699	.	+	0	ID=cds-WP_071001608.1;Parent=gene-PKHYL_RS07910;Dbxref=Genbank:WP_071001608.1;Name=WP_071001608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196221.1;locus_tag=PKHYL_RS07910;product=DUF1543 domain-containing protein;protein_id=WP_071001608.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1483701	1484009	.	+	.	ID=gene-PKHYL_RS07915;Name=PKHYL_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07915;old_locus_tag=PKHYL_18990
NZ_AP019516.1	GeneMarkS-2+	CDS	1483701	1484009	.	+	0	ID=cds-WP_240366412.1;Parent=gene-PKHYL_RS07915;Dbxref=Genbank:WP_240366412.1;Name=WP_240366412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07915;product=hypothetical protein;protein_id=WP_240366412.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1484250	1484537	.	+	.	ID=gene-PKHYL_RS07920;Name=PKHYL_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07920;old_locus_tag=PKHYL_19000
NZ_AP019516.1	GeneMarkS-2+	CDS	1484250	1484537	.	+	0	ID=cds-WP_240366413.1;Parent=gene-PKHYL_RS07920;Dbxref=Genbank:WP_240366413.1;Name=WP_240366413.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07920;product=hypothetical protein;protein_id=WP_240366413.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1484563	1488462	.	+	.	ID=gene-PKHYL_RS07925;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=pseudogene;locus_tag=PKHYL_RS07925;partial=true;pseudo=true;start_range=.,1484563
NZ_AP019516.1	Protein Homology	CDS	1484563	1488462	.	+	0	ID=cds-PKHYL_RS07925;Parent=gene-PKHYL_RS07925;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006139,GO:0004386;gbkey=CDS;gene=hrpA;go_function=helicase activity|0004386||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960265.1;locus_tag=PKHYL_RS07925;partial=true;product=ATP-dependent RNA helicase HrpA;pseudo=true;start_range=.,1484563;transl_table=11
NZ_AP019516.1	RefSeq	gene	1488533	1488862	.	-	.	ID=gene-PKHYL_RS07930;Name=PKHYL_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07930;old_locus_tag=PKHYL_19050
NZ_AP019516.1	GeneMarkS-2+	CDS	1488533	1488862	.	-	0	ID=cds-WP_071001605.1;Parent=gene-PKHYL_RS07930;Dbxref=Genbank:WP_071001605.1;Name=WP_071001605.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07930;product=hypothetical protein;protein_id=WP_071001605.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1489161	1489532	.	-	.	ID=gene-PKHYL_RS07935;Name=PKHYL_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07935;old_locus_tag=PKHYL_19060
NZ_AP019516.1	Protein Homology	CDS	1489161	1489532	.	-	0	ID=cds-WP_083328816.1;Parent=gene-PKHYL_RS07935;Dbxref=Genbank:WP_083328816.1;Name=WP_083328816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672594.1;locus_tag=PKHYL_RS07935;product=MliC family protein;protein_id=WP_083328816.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1489709	1490053	.	-	.	ID=gene-PKHYL_RS07940;Name=PKHYL_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07940;old_locus_tag=PKHYL_19070
NZ_AP019516.1	Protein Homology	CDS	1489709	1490053	.	-	0	ID=cds-WP_240366414.1;Parent=gene-PKHYL_RS07940;Dbxref=Genbank:WP_240366414.1;Name=WP_240366414.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013088.2;locus_tag=PKHYL_RS07940;product=EamA family transporter;protein_id=WP_240366414.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1490008	1490622	.	-	.	ID=gene-PKHYL_RS07945;Name=PKHYL_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07945;old_locus_tag=PKHYL_19080
NZ_AP019516.1	Protein Homology	CDS	1490008	1490622	.	-	0	ID=cds-WP_240366415.1;Parent=gene-PKHYL_RS07945;Dbxref=Genbank:WP_240366415.1;Name=WP_240366415.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013088.2;locus_tag=PKHYL_RS07945;product=EamA family transporter;protein_id=WP_240366415.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1490910	1491550	.	+	.	ID=gene-PKHYL_RS07950;Name=PKHYL_RS07950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07950;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1490910	1491550	.	+	0	ID=cds-PKHYL_RS07950;Parent=gene-PKHYL_RS07950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004783062.1;locus_tag=PKHYL_RS07950;product=DUF421 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1492149	1492727	.	-	.	ID=gene-PKHYL_RS07955;Name=PKHYL_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07955;old_locus_tag=PKHYL_19130
NZ_AP019516.1	Protein Homology	CDS	1492149	1492727	.	-	0	ID=cds-WP_240366416.1;Parent=gene-PKHYL_RS07955;Dbxref=Genbank:WP_240366416.1;Name=WP_240366416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198077.1;locus_tag=PKHYL_RS07955;product=ATP-binding protein;protein_id=WP_240366416.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1492699	1493085	.	-	.	ID=gene-PKHYL_RS17425;Name=PKHYL_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17425;old_locus_tag=PKHYL_19140
NZ_AP019516.1	Protein Homology	CDS	1492699	1493085	.	-	0	ID=cds-WP_269778303.1;Parent=gene-PKHYL_RS17425;Dbxref=Genbank:WP_269778303.1;Name=WP_269778303.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016837.2;locus_tag=PKHYL_RS17425;product=nicotinamide mononucleotide transporter family protein;protein_id=WP_269778303.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1493121	1493402	.	-	.	ID=gene-PKHYL_RS17430;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=PKHYL_RS17430;old_locus_tag=PKHYL_19150
NZ_AP019516.1	Protein Homology	CDS	1493121	1493402	.	-	0	ID=cds-WP_269778304.1;Parent=gene-PKHYL_RS17430;Dbxref=Genbank:WP_269778304.1;Name=WP_269778304.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: protein motif:HMM:NF016837.2;locus_tag=PKHYL_RS17430;product=nicotinamide riboside transporter PnuC;protein_id=WP_269778304.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1493681	1494825	.	+	.	ID=gene-PKHYL_RS07965;Name=PKHYL_RS07965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS07965;old_locus_tag=PKHYL_19170;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1493681	1494825	.	+	0	ID=cds-PKHYL_RS07965;Parent=gene-PKHYL_RS07965;Note=frameshifted;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513743.1;locus_tag=PKHYL_RS07965;product=beta-ketoacyl-ACP synthase III;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1495062	1496153	.	+	.	ID=gene-PKHYL_RS07970;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=PKHYL_RS07970;old_locus_tag=PKHYL_19180
NZ_AP019516.1	Protein Homology	CDS	1495062	1496153	.	+	0	ID=cds-WP_058024705.1;Parent=gene-PKHYL_RS07970;Dbxref=Genbank:WP_058024705.1;Name=WP_058024705.1;Ontology_term=GO:0006415,GO:0016149;gbkey=CDS;gene=prfA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669771.1;locus_tag=PKHYL_RS07970;product=peptide chain release factor 1;protein_id=WP_058024705.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1496258	1496566	.	+	.	ID=gene-PKHYL_RS07975;Name=PKHYL_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07975;old_locus_tag=PKHYL_19190
NZ_AP019516.1	Protein Homology	CDS	1496258	1496566	.	+	0	ID=cds-WP_071001598.1;Parent=gene-PKHYL_RS07975;Dbxref=Genbank:WP_071001598.1;Name=WP_071001598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018416045.1;locus_tag=PKHYL_RS07975;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_071001598.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1496556	1496759	.	+	.	ID=gene-PKHYL_RS07980;Name=PKHYL_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07980;old_locus_tag=PKHYL_19200
NZ_AP019516.1	Protein Homology	CDS	1496556	1496759	.	+	0	ID=cds-WP_240366417.1;Parent=gene-PKHYL_RS07980;Dbxref=Genbank:WP_240366417.1;Name=WP_240366417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005151652.1;locus_tag=PKHYL_RS07980;product=hypothetical protein;protein_id=WP_240366417.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1496989	1498548	.	+	.	ID=gene-PKHYL_RS07985;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=PKHYL_RS07985;old_locus_tag=PKHYL_19210
NZ_AP019516.1	Protein Homology	CDS	1496989	1498548	.	+	0	ID=cds-WP_240366418.1;Parent=gene-PKHYL_RS07985;Dbxref=Genbank:WP_240366418.1;Name=WP_240366418.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659869.1;locus_tag=PKHYL_RS07985;product=lysine--tRNA ligase;protein_id=WP_240366418.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1498672	1500168	.	+	.	ID=gene-PKHYL_RS07990;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=PKHYL_RS07990;old_locus_tag=PKHYL_19220
NZ_AP019516.1	Protein Homology	CDS	1498672	1500168	.	+	0	ID=cds-WP_240366419.1;Parent=gene-PKHYL_RS07990;Dbxref=Genbank:WP_240366419.1;Name=WP_240366419.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF005942.0;locus_tag=PKHYL_RS07990;product=DNA polymerase III subunit gamma/tau;protein_id=WP_240366419.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1500179	1500514	.	+	.	ID=gene-PKHYL_RS07995;Name=PKHYL_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS07995;old_locus_tag=PKHYL_19230
NZ_AP019516.1	GeneMarkS-2+	CDS	1500179	1500514	.	+	0	ID=cds-WP_093070999.1;Parent=gene-PKHYL_RS07995;Dbxref=Genbank:WP_093070999.1;Name=WP_093070999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS07995;product=hypothetical protein;protein_id=WP_093070999.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1500748	1501646	.	+	.	ID=gene-PKHYL_RS08000;Name=PKHYL_RS08000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08000;old_locus_tag=PKHYL_19250;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1500748	1501646	.	+	0	ID=cds-PKHYL_RS08000;Parent=gene-PKHYL_RS08000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513737.1;locus_tag=PKHYL_RS08000;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1501755	1502936	.	-	.	ID=gene-PKHYL_RS08005;Name=PKHYL_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08005;old_locus_tag=PKHYL_19260
NZ_AP019516.1	Protein Homology	CDS	1501755	1502936	.	-	0	ID=cds-WP_093071001.1;Parent=gene-PKHYL_RS08005;Dbxref=Genbank:WP_093071001.1;Name=WP_093071001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513736.1;locus_tag=PKHYL_RS08005;product=aspartate aminotransferase family protein;protein_id=WP_093071001.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1502978	1503169	.	-	.	ID=gene-PKHYL_RS08010;Name=PKHYL_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08010
NZ_AP019516.1	Protein Homology	CDS	1502978	1503169	.	-	0	ID=cds-WP_240366420.1;Parent=gene-PKHYL_RS08010;Dbxref=Genbank:WP_240366420.1;Name=WP_240366420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513735.1;locus_tag=PKHYL_RS08010;product=DNA gyrase inhibitor YacG;protein_id=WP_240366420.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1503352	1504007	.	+	.	ID=gene-PKHYL_RS08015;Name=PKHYL_RS08015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08015;old_locus_tag=PKHYL_19270;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1503352	1504007	.	+	0	ID=cds-PKHYL_RS08015;Parent=gene-PKHYL_RS08015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393644.1;locus_tag=PKHYL_RS08015;product=DUF938 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1504094	1505485	.	-	.	ID=gene-PKHYL_RS08020;Name=PKHYL_RS08020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08020;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1504094	1505485	.	-	0	ID=cds-PKHYL_RS08020;Parent=gene-PKHYL_RS08020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198056.1;locus_tag=PKHYL_RS08020;product=AarF/ABC1/UbiB kinase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1505874	1507185	.	-	.	ID=gene-PKHYL_RS08025;Name=purD;gbkey=Gene;gene=purD;gene_biotype=pseudogene;locus_tag=PKHYL_RS08025;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1505874	1507185	.	-	0	ID=cds-PKHYL_RS08025;Parent=gene-PKHYL_RS08025;Note=frameshifted;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016659107.1;locus_tag=PKHYL_RS08025;product=phosphoribosylamine--glycine ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1507325	1507522	.	+	.	ID=gene-PKHYL_RS08030;Name=PKHYL_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08030;old_locus_tag=PKHYL_19350
NZ_AP019516.1	GeneMarkS-2+	CDS	1507325	1507522	.	+	0	ID=cds-WP_240366421.1;Parent=gene-PKHYL_RS08030;Dbxref=Genbank:WP_240366421.1;Name=WP_240366421.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08030;product=hypothetical protein;protein_id=WP_240366421.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1507919	1509605	.	+	.	ID=gene-PKHYL_RS17435;Name=PKHYL_RS17435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17435;old_locus_tag=PKHYL_19360;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1507919	1509605	.	+	0	ID=cds-PKHYL_RS17435;Parent=gene-PKHYL_RS17435;Note=frameshifted;Ontology_term=GO:0019551,GO:0004352;gbkey=CDS;go_function=glutamate dehydrogenase (NAD+) activity|0004352||IEA;go_process=glutamate catabolic process to 2-oxoglutarate|0019551||IEA;inference=COORDINATES: protein motif:HMM:NF016944.2;locus_tag=PKHYL_RS17435;product=NAD-glutamate dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1509632	1511721	.	+	.	ID=gene-PKHYL_RS17440;Name=PKHYL_RS17440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17440;old_locus_tag=PKHYL_19390;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1509632	1511721	.	+	0	ID=cds-PKHYL_RS17440;Parent=gene-PKHYL_RS17440;Note=frameshifted;Ontology_term=GO:0019551,GO:0004352;gbkey=CDS;go_function=glutamate dehydrogenase (NAD+) activity|0004352||IEA;go_process=glutamate catabolic process to 2-oxoglutarate|0019551||IEA;inference=COORDINATES: protein motif:HMM:NF016944.2;locus_tag=PKHYL_RS17440;product=NAD-glutamate dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1511718	1512590	.	+	.	ID=gene-PKHYL_RS17445;Name=PKHYL_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17445;old_locus_tag=PKHYL_19410
NZ_AP019516.1	Protein Homology	CDS	1511718	1512590	.	+	0	ID=cds-WP_269778305.1;Parent=gene-PKHYL_RS17445;Dbxref=Genbank:WP_269778305.1;Name=WP_269778305.1;Ontology_term=GO:0019551,GO:0004352;gbkey=CDS;go_function=glutamate dehydrogenase (NAD+) activity|0004352||IEA;go_process=glutamate catabolic process to 2-oxoglutarate|0019551||IEA;inference=COORDINATES: protein motif:HMM:NF016944.2;locus_tag=PKHYL_RS17445;product=NAD-glutamate dehydrogenase;protein_id=WP_269778305.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1512724	1513137	.	-	.	ID=gene-PKHYL_RS08040;Name=PKHYL_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08040;old_locus_tag=PKHYL_19420
NZ_AP019516.1	Protein Homology	CDS	1512724	1513137	.	-	0	ID=cds-WP_240366422.1;Parent=gene-PKHYL_RS08040;Dbxref=Genbank:WP_240366422.1;Name=WP_240366422.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024947.2;locus_tag=PKHYL_RS08040;product=SbcC/MukB-like Walker B domain-containing protein;protein_id=WP_240366422.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1513228	1514091	.	-	.	ID=gene-PKHYL_RS08045;Name=PKHYL_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08045;old_locus_tag=PKHYL_19430
NZ_AP019516.1	GeneMarkS-2+	CDS	1513228	1514091	.	-	0	ID=cds-WP_240366423.1;Parent=gene-PKHYL_RS08045;Dbxref=Genbank:WP_240366423.1;Name=WP_240366423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08045;product=hypothetical protein;protein_id=WP_240366423.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1514078	1514344	.	-	.	ID=gene-PKHYL_RS08050;Name=PKHYL_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08050;old_locus_tag=PKHYL_19440
NZ_AP019516.1	GeneMarkS-2+	CDS	1514078	1514344	.	-	0	ID=cds-WP_240366424.1;Parent=gene-PKHYL_RS08050;Dbxref=Genbank:WP_240366424.1;Name=WP_240366424.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08050;product=hypothetical protein;protein_id=WP_240366424.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1514328	1516283	.	-	.	ID=gene-PKHYL_RS08055;Name=PKHYL_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08055;old_locus_tag=PKHYL_19450
NZ_AP019516.1	GeneMarkS-2+	CDS	1514328	1516283	.	-	0	ID=cds-WP_240366425.1;Parent=gene-PKHYL_RS08055;Dbxref=Genbank:WP_240366425.1;Name=WP_240366425.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08055;product=hypothetical protein;protein_id=WP_240366425.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1516255	1516599	.	-	.	ID=gene-PKHYL_RS08060;Name=PKHYL_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08060;old_locus_tag=PKHYL_19460
NZ_AP019516.1	Protein Homology	CDS	1516255	1516599	.	-	0	ID=cds-WP_240366426.1;Parent=gene-PKHYL_RS08060;Dbxref=Genbank:WP_240366426.1;Name=WP_240366426.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024867.2;locus_tag=PKHYL_RS08060;product=AAA family ATPase;protein_id=WP_240366426.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1516773	1517081	.	-	.	ID=gene-PKHYL_RS08065;Name=PKHYL_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08065;old_locus_tag=PKHYL_19470
NZ_AP019516.1	Protein Homology	CDS	1516773	1517081	.	-	0	ID=cds-WP_240366427.1;Parent=gene-PKHYL_RS08065;Dbxref=Genbank:WP_240366427.1;Name=WP_240366427.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023739.2;locus_tag=PKHYL_RS08065;product=exonuclease SbcCD subunit D C-terminal domain-containing protein;protein_id=WP_240366427.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1517123	1518082	.	-	.	ID=gene-PKHYL_RS08070;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=PKHYL_RS08070;old_locus_tag=PKHYL_19480
NZ_AP019516.1	Protein Homology	CDS	1517123	1518082	.	-	0	ID=cds-WP_240366428.1;Parent=gene-PKHYL_RS08070;Dbxref=Genbank:WP_240366428.1;Name=WP_240366428.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:TIGR00619.1;locus_tag=PKHYL_RS08070;product=exonuclease subunit SbcD;protein_id=WP_240366428.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1518079	1518279	.	-	.	ID=gene-PKHYL_RS08075;Name=PKHYL_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08075;old_locus_tag=PKHYL_19490
NZ_AP019516.1	Protein Homology	CDS	1518079	1518279	.	-	0	ID=cds-WP_240366429.1;Parent=gene-PKHYL_RS08075;Dbxref=Genbank:WP_240366429.1;Name=WP_240366429.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012376.2;locus_tag=PKHYL_RS08075;product=metallophosphoesterase;protein_id=WP_240366429.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1518432	1518812	.	-	.	ID=gene-PKHYL_RS08080;Name=PKHYL_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08080;old_locus_tag=PKHYL_19500
NZ_AP019516.1	GeneMarkS-2+	CDS	1518432	1518812	.	-	0	ID=cds-WP_240366430.1;Parent=gene-PKHYL_RS08080;Dbxref=Genbank:WP_240366430.1;Name=WP_240366430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08080;product=hypothetical protein;protein_id=WP_240366430.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1518809	1519396	.	-	.	ID=gene-PKHYL_RS08085;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=PKHYL_RS08085;old_locus_tag=PKHYL_19510
NZ_AP019516.1	Protein Homology	CDS	1518809	1519396	.	-	0	ID=cds-WP_240366431.1;Parent=gene-PKHYL_RS08085;Dbxref=Genbank:WP_240366431.1;Name=WP_240366431.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: protein motif:HMM:NF004790.0;locus_tag=PKHYL_RS08085;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_240366431.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1519302	1519829	.	-	.	ID=gene-PKHYL_RS08090;Name=PKHYL_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08090;old_locus_tag=PKHYL_19520
NZ_AP019516.1	Protein Homology	CDS	1519302	1519829	.	-	0	ID=cds-WP_269778306.1;Parent=gene-PKHYL_RS08090;Dbxref=Genbank:WP_269778306.1;Name=WP_269778306.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01470.1;locus_tag=PKHYL_RS08090;product=hypothetical protein;protein_id=WP_269778306.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1519826	1520008	.	-	.	ID=gene-PKHYL_RS17450;Name=PKHYL_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17450;old_locus_tag=PKHYL_19530
NZ_AP019516.1	Protein Homology	CDS	1519826	1520008	.	-	0	ID=cds-WP_269778307.1;Parent=gene-PKHYL_RS17450;Dbxref=Genbank:WP_269778307.1;Name=WP_269778307.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024638.2;locus_tag=PKHYL_RS17450;product=hypothetical protein;protein_id=WP_269778307.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1520362	1520541	.	+	.	ID=gene-PKHYL_RS08095;Name=PKHYL_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08095;old_locus_tag=PKHYL_19540
NZ_AP019516.1	Protein Homology	CDS	1520362	1520541	.	+	0	ID=cds-WP_240366432.1;Parent=gene-PKHYL_RS08095;Dbxref=Genbank:WP_240366432.1;Name=WP_240366432.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012334.2;locus_tag=PKHYL_RS08095;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_240366432.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1520587	1521225	.	-	.	ID=gene-PKHYL_RS08100;Name=PKHYL_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08100;old_locus_tag=PKHYL_19550
NZ_AP019516.1	Protein Homology	CDS	1520587	1521225	.	-	0	ID=cds-WP_058025150.1;Parent=gene-PKHYL_RS08100;Dbxref=Genbank:WP_058025150.1;Name=WP_058025150.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513727.1;locus_tag=PKHYL_RS08100;product=phosphoadenosine phosphosulfate reductase family protein;protein_id=WP_058025150.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1521264	1521854	.	-	.	ID=gene-PKHYL_RS08105;Name=PKHYL_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08105;old_locus_tag=PKHYL_19560
NZ_AP019516.1	Protein Homology	CDS	1521264	1521854	.	-	0	ID=cds-WP_240366433.1;Parent=gene-PKHYL_RS08105;Dbxref=Genbank:WP_240366433.1;Name=WP_240366433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513726.1;locus_tag=PKHYL_RS08105;product=DUF934 domain-containing protein;protein_id=WP_240366433.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1521847	1523531	.	-	.	ID=gene-PKHYL_RS08110;Name=PKHYL_RS08110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08110;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1521847	1523531	.	-	0	ID=cds-PKHYL_RS08110;Parent=gene-PKHYL_RS08110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513725.1;locus_tag=PKHYL_RS08110;product=nitrite/sulfite reductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1523887	1525149	.	+	.	ID=gene-PKHYL_RS08115;Name=sat;gbkey=Gene;gene=sat;gene_biotype=protein_coding;locus_tag=PKHYL_RS08115;old_locus_tag=PKHYL_19600
NZ_AP019516.1	Protein Homology	CDS	1523887	1525149	.	+	0	ID=cds-WP_071001581.1;Parent=gene-PKHYL_RS08115;Dbxref=Genbank:WP_071001581.1;Name=WP_071001581.1;Ontology_term=GO:0004781;gbkey=CDS;gene=sat;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280343.1;locus_tag=PKHYL_RS08115;product=sulfate adenylyltransferase;protein_id=WP_071001581.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1525355	1525771	.	-	.	ID=gene-PKHYL_RS08120;Name=PKHYL_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08120;old_locus_tag=PKHYL_19610
NZ_AP019516.1	GeneMarkS-2+	CDS	1525355	1525771	.	-	0	ID=cds-WP_240366434.1;Parent=gene-PKHYL_RS08120;Dbxref=Genbank:WP_240366434.1;Name=WP_240366434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08120;product=hypothetical protein;protein_id=WP_240366434.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1526228	1527264	.	+	.	ID=gene-PKHYL_RS08125;Name=PKHYL_RS08125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08125;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1526228	1527264	.	+	0	ID=cds-PKHYL_RS08125;Parent=gene-PKHYL_RS08125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443560.1;locus_tag=PKHYL_RS08125;product=sulfate ABC transporter substrate-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1527523	1528614	.	+	.	ID=gene-PKHYL_RS08130;Name=PKHYL_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08130;old_locus_tag=PKHYL_19640
NZ_AP019516.1	Protein Homology	CDS	1527523	1528614	.	+	0	ID=cds-WP_093071053.1;Parent=gene-PKHYL_RS08130;Dbxref=Genbank:WP_093071053.1;Name=WP_093071053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513721.1;locus_tag=PKHYL_RS08130;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_093071053.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1528854	1529726	.	+	.	ID=gene-PKHYL_RS08135;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=PKHYL_RS08135;old_locus_tag=PKHYL_19650
NZ_AP019516.1	Protein Homology	CDS	1528854	1529726	.	+	0	ID=cds-WP_240366509.1;Parent=gene-PKHYL_RS08135;Dbxref=Genbank:WP_240366509.1;Name=WP_240366509.1;Ontology_term=GO:0008272,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysT;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960390.1;locus_tag=PKHYL_RS08135;product=sulfate ABC transporter permease subunit CysT;protein_id=WP_240366509.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1529728	1530662	.	+	.	ID=gene-PKHYL_RS08140;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=pseudogene;locus_tag=PKHYL_RS08140;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1529728	1530662	.	+	0	ID=cds-PKHYL_RS08140;Parent=gene-PKHYL_RS08140;Note=frameshifted;Ontology_term=GO:0008272,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysW;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443558.1;locus_tag=PKHYL_RS08140;product=sulfate ABC transporter permease subunit CysW;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1530760	1531470	.	+	.	ID=gene-PKHYL_RS08145;Name=cysA;end_range=1531470,.;gbkey=Gene;gene=cysA;gene_biotype=pseudogene;locus_tag=PKHYL_RS08145;old_locus_tag=PKHYL_19680;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1530760	1531470	.	+	0	ID=cds-PKHYL_RS08145;Parent=gene-PKHYL_RS08145;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008272,GO:0005524,GO:0015419,GO:0009898,GO:0055052;end_range=1531470,.;gbkey=CDS;gene=cysA;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004790711.1;locus_tag=PKHYL_RS08145;partial=true;product=sulfate ABC transporter ATP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1531640	1531937	.	-	.	ID=gene-PKHYL_RS08150;Name=PKHYL_RS08150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08150;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1531640	1531937	.	-	0	ID=cds-PKHYL_RS08150;Parent=gene-PKHYL_RS08150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513717.1;locus_tag=PKHYL_RS08150;product=metalloregulator ArsR/SmtB family transcription factor;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1532244	1532435	.	+	.	ID=gene-PKHYL_RS08155;Name=PKHYL_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08155;old_locus_tag=PKHYL_19690
NZ_AP019516.1	Protein Homology	CDS	1532244	1532435	.	+	0	ID=cds-WP_058025142.1;Parent=gene-PKHYL_RS08155;Dbxref=Genbank:WP_058025142.1;Name=WP_058025142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198018.1;locus_tag=PKHYL_RS08155;product=(2Fe-2S)-binding protein;protein_id=WP_058025142.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1532809	1533297	.	+	.	ID=gene-PKHYL_RS08160;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=PKHYL_RS08160;old_locus_tag=PKHYL_19700
NZ_AP019516.1	Protein Homology	CDS	1532809	1533297	.	+	0	ID=cds-WP_093071032.1;Parent=gene-PKHYL_RS08160;Dbxref=Genbank:WP_093071032.1;Name=WP_093071032.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513715.1;locus_tag=PKHYL_RS08160;product=bacterioferritin;protein_id=WP_093071032.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1533358	1533840	.	+	.	ID=gene-PKHYL_RS08165;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=PKHYL_RS08165;old_locus_tag=PKHYL_19710
NZ_AP019516.1	Protein Homology	CDS	1533358	1533840	.	+	0	ID=cds-WP_071001574.1;Parent=gene-PKHYL_RS08165;Dbxref=Genbank:WP_071001574.1;Name=WP_071001574.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198010.1;locus_tag=PKHYL_RS08165;product=bacterioferritin;protein_id=WP_071001574.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1533997	1535370	.	-	.	ID=gene-PKHYL_RS08170;Name=PKHYL_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08170;old_locus_tag=PKHYL_19720
NZ_AP019516.1	Protein Homology	CDS	1533997	1535370	.	-	0	ID=cds-WP_240366435.1;Parent=gene-PKHYL_RS08170;Dbxref=Genbank:WP_240366435.1;Name=WP_240366435.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=PKHYL_RS08170;product=MFS transporter;protein_id=WP_240366435.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1535875	1536712	.	+	.	ID=gene-PKHYL_RS08175;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=pseudogene;locus_tag=PKHYL_RS08175;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1535875	1536712	.	+	0	ID=cds-PKHYL_RS08175;Parent=gene-PKHYL_RS08175;Note=frameshifted;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393511.1;locus_tag=PKHYL_RS08175;product=glutathione-dependent disulfide-bond oxidoreductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1537028	1538037	.	+	.	ID=gene-PKHYL_RS08180;Name=PKHYL_RS08180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08180;old_locus_tag=PKHYL_19750;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1537028	1538037	.	+	0	ID=cds-PKHYL_RS08180;Parent=gene-PKHYL_RS08180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018389.2;locus_tag=PKHYL_RS08180;product=DUF1176 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1538603	1538746	.	+	.	ID=gene-PKHYL_RS08185;Name=PKHYL_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08185;old_locus_tag=PKHYL_19770
NZ_AP019516.1	GeneMarkS-2+	CDS	1538603	1538746	.	+	0	ID=cds-WP_240366436.1;Parent=gene-PKHYL_RS08185;Dbxref=Genbank:WP_240366436.1;Name=WP_240366436.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08185;product=hypothetical protein;protein_id=WP_240366436.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1538715	1540220	.	+	.	ID=gene-PKHYL_RS08190;Name=PKHYL_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08190;old_locus_tag=PKHYL_19780
NZ_AP019516.1	Protein Homology	CDS	1538715	1540220	.	+	0	ID=cds-WP_240366437.1;Parent=gene-PKHYL_RS08190;Dbxref=Genbank:WP_240366437.1;Name=WP_240366437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393510.1;locus_tag=PKHYL_RS08190;product=DEAD/DEAH box helicase;protein_id=WP_240366437.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1540484	1541728	.	+	.	ID=gene-PKHYL_RS08195;Name=PKHYL_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08195;old_locus_tag=PKHYL_19800
NZ_AP019516.1	Protein Homology	CDS	1540484	1541728	.	+	0	ID=cds-WP_071001570.1;Parent=gene-PKHYL_RS08195;Dbxref=Genbank:WP_071001570.1;Name=WP_071001570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280357.1;locus_tag=PKHYL_RS08195;product=DUF819 family protein;protein_id=WP_071001570.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1541963	1544530	.	+	.	ID=gene-PKHYL_RS08200;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=PKHYL_RS08200;old_locus_tag=PKHYL_19810
NZ_AP019516.1	Protein Homology	CDS	1541963	1544530	.	+	0	ID=cds-WP_071001569.1;Parent=gene-PKHYL_RS08200;Dbxref=Genbank:WP_071001569.1;Name=WP_071001569.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrA;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443144.1;locus_tag=PKHYL_RS08200;product=excinuclease ABC subunit UvrA;protein_id=WP_071001569.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1544909	1545172	.	+	.	ID=gene-PKHYL_RS17455;Name=PKHYL_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17455;old_locus_tag=PKHYL_19820
NZ_AP019516.1	Protein Homology	CDS	1544909	1545172	.	+	0	ID=cds-WP_269778308.1;Parent=gene-PKHYL_RS17455;Dbxref=Genbank:WP_269778308.1;Name=WP_269778308.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017932.2;locus_tag=PKHYL_RS17455;product=zinc-dependent peptidase;protein_id=WP_269778308.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1545201	1545590	.	+	.	ID=gene-PKHYL_RS17460;Name=PKHYL_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17460
NZ_AP019516.1	Protein Homology	CDS	1545201	1545590	.	+	0	ID=cds-WP_269778316.1;Parent=gene-PKHYL_RS17460;Dbxref=Genbank:WP_269778316.1;Name=WP_269778316.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017932.2;locus_tag=PKHYL_RS17460;product=zinc-dependent peptidase;protein_id=WP_269778316.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1545948	1546118	.	-	.	ID=gene-PKHYL_RS08210;Name=PKHYL_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08210;old_locus_tag=PKHYL_19840
NZ_AP019516.1	GeneMarkS-2+	CDS	1545948	1546118	.	-	0	ID=cds-WP_240366438.1;Parent=gene-PKHYL_RS08210;Dbxref=Genbank:WP_240366438.1;Name=WP_240366438.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08210;product=hypothetical protein;protein_id=WP_240366438.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1546141	1546419	.	-	.	ID=gene-PKHYL_RS08215;Name=PKHYL_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08215;old_locus_tag=PKHYL_19850
NZ_AP019516.1	GeneMarkS-2+	CDS	1546141	1546419	.	-	0	ID=cds-WP_240366439.1;Parent=gene-PKHYL_RS08215;Dbxref=Genbank:WP_240366439.1;Name=WP_240366439.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08215;product=hypothetical protein;protein_id=WP_240366439.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1546671	1547156	.	+	.	ID=gene-PKHYL_RS08220;Name=PKHYL_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08220;old_locus_tag=PKHYL_19860
NZ_AP019516.1	Protein Homology	CDS	1546671	1547156	.	+	0	ID=cds-WP_071001566.1;Parent=gene-PKHYL_RS08220;Dbxref=Genbank:WP_071001566.1;Name=WP_071001566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280364.1;locus_tag=PKHYL_RS08220;product=hypothetical protein;protein_id=WP_071001566.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1548466	1548771	.	+	.	ID=gene-PKHYL_RS08225;Name=PKHYL_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08225;old_locus_tag=PKHYL_19870
NZ_AP019516.1	Protein Homology	CDS	1548466	1548771	.	+	0	ID=cds-WP_240366440.1;Parent=gene-PKHYL_RS08225;Dbxref=Genbank:WP_240366440.1;Name=WP_240366440.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024750.2;locus_tag=PKHYL_RS08225;product=Arm DNA-binding domain-containing protein;protein_id=WP_240366440.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1548903	1549733	.	+	.	ID=gene-PKHYL_RS08230;Name=PKHYL_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08230;old_locus_tag=PKHYL_19880
NZ_AP019516.1	Protein Homology	CDS	1548903	1549733	.	+	0	ID=cds-WP_240366441.1;Parent=gene-PKHYL_RS08230;Dbxref=Genbank:WP_240366441.1;Name=WP_240366441.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=PKHYL_RS08230;product=tyrosine-type recombinase/integrase;protein_id=WP_240366441.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1549854	1550876	.	+	.	ID=gene-PKHYL_RS08235;Name=PKHYL_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08235;old_locus_tag=PKHYL_19890
NZ_AP019516.1	Protein Homology	CDS	1549854	1550876	.	+	0	ID=cds-WP_240366510.1;Parent=gene-PKHYL_RS08235;Dbxref=Genbank:WP_240366510.1;Name=WP_240366510.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=PKHYL_RS08235;product=tyrosine-type recombinase/integrase;protein_id=WP_240366510.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1551126	1551491	.	+	.	ID=gene-PKHYL_RS08240;Name=PKHYL_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08240;old_locus_tag=PKHYL_19910
NZ_AP019516.1	GeneMarkS-2+	CDS	1551126	1551491	.	+	0	ID=cds-WP_240366442.1;Parent=gene-PKHYL_RS08240;Dbxref=Genbank:WP_240366442.1;Name=WP_240366442.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08240;product=hypothetical protein;protein_id=WP_240366442.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1551620	1552057	.	+	.	ID=gene-PKHYL_RS08245;Name=PKHYL_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08245;old_locus_tag=PKHYL_19920
NZ_AP019516.1	Protein Homology	CDS	1551620	1552057	.	+	0	ID=cds-WP_240366443.1;Parent=gene-PKHYL_RS08245;Dbxref=Genbank:WP_240366443.1;Name=WP_240366443.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025000.2;locus_tag=PKHYL_RS08245;product=transposase family protein;protein_id=WP_240366443.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1552090	1552449	.	+	.	ID=gene-PKHYL_RS08250;Name=PKHYL_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08250;old_locus_tag=PKHYL_19930
NZ_AP019516.1	Protein Homology	CDS	1552090	1552449	.	+	0	ID=cds-WP_071001768.1;Parent=gene-PKHYL_RS08250;Dbxref=Genbank:WP_071001768.1;Name=WP_071001768.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024752.2;locus_tag=PKHYL_RS08250;product=transposase;protein_id=WP_071001768.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1552741	1553115	.	+	.	ID=gene-PKHYL_RS08255;Name=PKHYL_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08255;old_locus_tag=PKHYL_19950
NZ_AP019516.1	GeneMarkS-2+	CDS	1552741	1553115	.	+	0	ID=cds-WP_240366444.1;Parent=gene-PKHYL_RS08255;Dbxref=Genbank:WP_240366444.1;Name=WP_240366444.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08255;product=hypothetical protein;protein_id=WP_240366444.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1553303	1554337	.	+	.	ID=gene-PKHYL_RS08260;Name=PKHYL_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08260;old_locus_tag=PKHYL_19960
NZ_AP019516.1	GeneMarkS-2+	CDS	1553303	1554337	.	+	0	ID=cds-WP_240366445.1;Parent=gene-PKHYL_RS08260;Dbxref=Genbank:WP_240366445.1;Name=WP_240366445.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08260;product=hypothetical protein;protein_id=WP_240366445.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1554331	1554761	.	+	.	ID=gene-PKHYL_RS08265;Name=PKHYL_RS08265;end_range=1554761,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08265;old_locus_tag=PKHYL_19970;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1554331	1554761	.	+	0	ID=cds-PKHYL_RS08265;Parent=gene-PKHYL_RS08265;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1554761,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009585094.1;locus_tag=PKHYL_RS08265;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1554977	1556196	.	-	.	ID=gene-PKHYL_RS08270;Name=PKHYL_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08270;old_locus_tag=PKHYL_19980
NZ_AP019516.1	Protein Homology	CDS	1555911	1556196	.	-	0	ID=cds-WP_240366511.1;Parent=gene-PKHYL_RS08270;Dbxref=Genbank:WP_240366511.1;Name=WP_240366511.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611465.1;locus_tag=PKHYL_RS08270;product=IS3 family transposase;protein_id=WP_240366511.1;transl_table=11
NZ_AP019516.1	Protein Homology	CDS	1554977	1555911	.	-	2	ID=cds-WP_240366511.1;Parent=gene-PKHYL_RS08270;Dbxref=Genbank:WP_240366511.1;Name=WP_240366511.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611465.1;locus_tag=PKHYL_RS08270;product=IS3 family transposase;protein_id=WP_240366511.1;transl_table=11
NZ_AP019516.1	cmsearch	sequence_feature	1555805	1555921	.	-	.	ID=id-PKHYL_RS08270;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS08270
NZ_AP019516.1	RefSeq	pseudogene	1556429	1556730	.	+	.	ID=gene-PKHYL_RS08275;Name=PKHYL_RS08275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08275;old_locus_tag=PKHYL_20000;partial=true;pseudo=true;start_range=.,1556429
NZ_AP019516.1	Protein Homology	CDS	1556429	1556730	.	+	0	ID=cds-PKHYL_RS08275;Parent=gene-PKHYL_RS08275;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280162.1;locus_tag=PKHYL_RS08275;partial=true;product=transposase;pseudo=true;start_range=.,1556429;transl_table=11
NZ_AP019516.1	RefSeq	gene	1556761	1557006	.	-	.	ID=gene-PKHYL_RS08280;Name=PKHYL_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08280;old_locus_tag=PKHYL_20010
NZ_AP019516.1	GeneMarkS-2+	CDS	1556761	1557006	.	-	0	ID=cds-WP_201605693.1;Parent=gene-PKHYL_RS08280;Dbxref=Genbank:WP_201605693.1;Name=WP_201605693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08280;product=hypothetical protein;protein_id=WP_201605693.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1557307	1557543	.	-	.	ID=gene-PKHYL_RS08285;Name=PKHYL_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08285;old_locus_tag=PKHYL_20020
NZ_AP019516.1	GeneMarkS-2+	CDS	1557307	1557543	.	-	0	ID=cds-WP_240366446.1;Parent=gene-PKHYL_RS08285;Dbxref=Genbank:WP_240366446.1;Name=WP_240366446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08285;product=hypothetical protein;protein_id=WP_240366446.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1557816	1558097	.	-	.	ID=gene-PKHYL_RS08290;Name=PKHYL_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08290;old_locus_tag=PKHYL_20030
NZ_AP019516.1	GeneMarkS-2+	CDS	1557816	1558097	.	-	0	ID=cds-WP_240366447.1;Parent=gene-PKHYL_RS08290;Dbxref=Genbank:WP_240366447.1;Name=WP_240366447.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08290;product=hypothetical protein;protein_id=WP_240366447.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1558357	1559520	.	+	.	ID=gene-PKHYL_RS08295;Name=PKHYL_RS08295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08295;old_locus_tag=PKHYL_20060;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1558357	1559520	.	+	0	ID=cds-PKHYL_RS08295;Parent=gene-PKHYL_RS08295;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611943.1;locus_tag=PKHYL_RS08295;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1559520	1559810	.	+	.	ID=gene-PKHYL_RS08300;Name=PKHYL_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08300;old_locus_tag=PKHYL_20070
NZ_AP019516.1	GeneMarkS-2+	CDS	1559520	1559810	.	+	0	ID=cds-WP_240366448.1;Parent=gene-PKHYL_RS08300;Dbxref=Genbank:WP_240366448.1;Name=WP_240366448.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08300;product=hypothetical protein;protein_id=WP_240366448.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1559933	1560166	.	+	.	ID=gene-PKHYL_RS08305;Name=PKHYL_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08305;old_locus_tag=PKHYL_20080
NZ_AP019516.1	GeneMarkS-2+	CDS	1559933	1560166	.	+	0	ID=cds-WP_240366449.1;Parent=gene-PKHYL_RS08305;Dbxref=Genbank:WP_240366449.1;Name=WP_240366449.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08305;product=hypothetical protein;protein_id=WP_240366449.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1560194	1561186	.	+	.	ID=gene-PKHYL_RS08310;Name=PKHYL_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08310;old_locus_tag=PKHYL_20090
NZ_AP019516.1	Protein Homology	CDS	1560194	1561186	.	+	0	ID=cds-WP_240365287.1-5;Parent=gene-PKHYL_RS08310;Dbxref=Genbank:WP_240365287.1;Name=WP_240365287.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=PKHYL_RS08310;product=IS30 family transposase;protein_id=WP_240365287.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1561578	1561979	.	+	.	ID=gene-PKHYL_RS08315;Name=PKHYL_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08315;old_locus_tag=PKHYL_20100
NZ_AP019516.1	Protein Homology	CDS	1561578	1561979	.	+	0	ID=cds-WP_240366450.1;Parent=gene-PKHYL_RS08315;Dbxref=Genbank:WP_240366450.1;Name=WP_240366450.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015378.2;locus_tag=PKHYL_RS08315;product=PepSY domain-containing protein;protein_id=WP_240366450.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1562129	1562479	.	+	.	ID=gene-PKHYL_RS08320;Name=PKHYL_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08320;old_locus_tag=PKHYL_20110
NZ_AP019516.1	Protein Homology	CDS	1562129	1562479	.	+	0	ID=cds-WP_240366451.1;Parent=gene-PKHYL_RS08320;Dbxref=Genbank:WP_240366451.1;Name=WP_240366451.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=PKHYL_RS08320;product=response regulator;protein_id=WP_240366451.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1562516	1563590	.	-	.	ID=gene-PKHYL_RS08325;Name=PKHYL_RS08325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08325;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1562516	1563590	.	-	0	ID=cds-PKHYL_RS08325;Parent=gene-PKHYL_RS08325;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611560.1;locus_tag=PKHYL_RS08325;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1563698	1563838	.	+	.	ID=gene-PKHYL_RS08330;Name=PKHYL_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08330
NZ_AP019516.1	GeneMarkS-2+	CDS	1563698	1563838	.	+	0	ID=cds-WP_240366452.1;Parent=gene-PKHYL_RS08330;Dbxref=Genbank:WP_240366452.1;Name=WP_240366452.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08330;product=hypothetical protein;protein_id=WP_240366452.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1563972	1564292	.	+	.	ID=gene-PKHYL_RS08335;Name=PKHYL_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08335;old_locus_tag=PKHYL_20150
NZ_AP019516.1	GeneMarkS-2+	CDS	1563972	1564292	.	+	0	ID=cds-WP_240366453.1;Parent=gene-PKHYL_RS08335;Dbxref=Genbank:WP_240366453.1;Name=WP_240366453.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08335;product=hypothetical protein;protein_id=WP_240366453.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1564357	1565628	.	+	.	ID=gene-PKHYL_RS08340;Name=PKHYL_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08340;old_locus_tag=PKHYL_20160
NZ_AP019516.1	Protein Homology	CDS	1564357	1565628	.	+	0	ID=cds-WP_240366454.1;Parent=gene-PKHYL_RS08340;Dbxref=Genbank:WP_240366454.1;Name=WP_240366454.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=PKHYL_RS08340;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_240366454.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1565834	1566286	.	+	.	ID=gene-PKHYL_RS08345;Name=PKHYL_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08345
NZ_AP019516.1	Protein Homology	CDS	1565834	1566286	.	+	0	ID=cds-WP_093071340.1;Parent=gene-PKHYL_RS08345;Dbxref=Genbank:WP_093071340.1;Name=WP_093071340.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=PKHYL_RS08345;product=transposase;protein_id=WP_093071340.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1566250	1567469	.	-	.	ID=gene-PKHYL_RS08350;Name=PKHYL_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08350;old_locus_tag=PKHYL_20170
NZ_AP019516.1	Protein Homology	CDS	1567187	1567469	.	-	0	ID=cds-WP_093071339.1;Parent=gene-PKHYL_RS08350;Dbxref=Genbank:WP_093071339.1;Name=WP_093071339.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1;locus_tag=PKHYL_RS08350;product=IS3 family transposase;protein_id=WP_093071339.1;transl_table=11
NZ_AP019516.1	Protein Homology	CDS	1566250	1567187	.	-	2	ID=cds-WP_093071339.1;Parent=gene-PKHYL_RS08350;Dbxref=Genbank:WP_093071339.1;Name=WP_093071339.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611570.1;locus_tag=PKHYL_RS08350;product=IS3 family transposase;protein_id=WP_093071339.1;transl_table=11
NZ_AP019516.1	cmsearch	sequence_feature	1567078	1567194	.	-	.	ID=id-PKHYL_RS08350;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS08350
NZ_AP019516.1	RefSeq	gene	1567600	1567863	.	+	.	ID=gene-PKHYL_RS08355;Name=PKHYL_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08355;old_locus_tag=PKHYL_20190
NZ_AP019516.1	Protein Homology	CDS	1567600	1567863	.	+	0	ID=cds-WP_240366455.1;Parent=gene-PKHYL_RS08355;Dbxref=Genbank:WP_240366455.1;Name=WP_240366455.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: protein motif:HMM:NF013862.2;locus_tag=PKHYL_RS08355;product=patatin-like phospholipase family protein;protein_id=WP_240366455.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1567997	1569161	.	+	.	ID=gene-PKHYL_RS08360;Name=PKHYL_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08360;old_locus_tag=PKHYL_20210
NZ_AP019516.1	Protein Homology	CDS	1567997	1568259	.	+	0	ID=cds-WP_240366456.1;Parent=gene-PKHYL_RS08360;Dbxref=Genbank:WP_240366456.1;Name=WP_240366456.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612080.1;locus_tag=PKHYL_RS08360;product=IS3 family transposase;protein_id=WP_240366456.1;transl_table=11
NZ_AP019516.1	Protein Homology	CDS	1568258	1569161	.	+	1	ID=cds-WP_240366456.1;Parent=gene-PKHYL_RS08360;Dbxref=Genbank:WP_240366456.1;Name=WP_240366456.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612080.1;locus_tag=PKHYL_RS08360;product=IS3 family transposase;protein_id=WP_240366456.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1569244	1569885	.	+	.	ID=gene-PKHYL_RS08365;Name=PKHYL_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08365;old_locus_tag=PKHYL_20220
NZ_AP019516.1	Protein Homology	CDS	1569244	1569885	.	+	0	ID=cds-WP_269778317.1;Parent=gene-PKHYL_RS08365;Dbxref=Genbank:WP_269778317.1;Name=WP_269778317.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041079.1;locus_tag=PKHYL_RS08365;product=CBASS cGAMP-activated phospholipase;protein_id=WP_269778317.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1569878	1570162	.	+	.	ID=gene-PKHYL_RS08370;Name=PKHYL_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08370;old_locus_tag=PKHYL_20230
NZ_AP019516.1	GeneMarkS-2+	CDS	1569878	1570162	.	+	0	ID=cds-WP_240366458.1;Parent=gene-PKHYL_RS08370;Dbxref=Genbank:WP_240366458.1;Name=WP_240366458.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08370;product=hypothetical protein;protein_id=WP_240366458.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1570153	1571223	.	+	.	ID=gene-PKHYL_RS08375;Name=PKHYL_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08375;old_locus_tag=PKHYL_20240
NZ_AP019516.1	Protein Homology	CDS	1570153	1571223	.	+	0	ID=cds-WP_240366459.1;Parent=gene-PKHYL_RS08375;Dbxref=Genbank:WP_240366459.1;Name=WP_240366459.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041078.1;locus_tag=PKHYL_RS08375;product=hypothetical protein;protein_id=WP_240366459.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1571445	1572257	.	+	.	ID=gene-PKHYL_RS08380;Name=PKHYL_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08380;old_locus_tag=PKHYL_20260
NZ_AP019516.1	GeneMarkS-2+	CDS	1571445	1572257	.	+	0	ID=cds-WP_240366460.1;Parent=gene-PKHYL_RS08380;Dbxref=Genbank:WP_240366460.1;Name=WP_240366460.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08380;product=hypothetical protein;protein_id=WP_240366460.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1573056	1574130	.	-	.	ID=gene-PKHYL_RS08385;Name=PKHYL_RS08385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08385;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1573056	1574130	.	-	0	ID=cds-PKHYL_RS08385;Parent=gene-PKHYL_RS08385;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611560.1;locus_tag=PKHYL_RS08385;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1574171	1574578	.	+	.	ID=gene-PKHYL_RS08390;Name=PKHYL_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08390;old_locus_tag=PKHYL_20290
NZ_AP019516.1	Protein Homology	CDS	1574171	1574578	.	+	0	ID=cds-WP_240366461.1;Parent=gene-PKHYL_RS08390;Dbxref=Genbank:WP_240366461.1;Name=WP_240366461.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025819.2;locus_tag=PKHYL_RS08390;product=Mov34/MPN/PAD-1 family protein;protein_id=WP_240366461.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1574809	1575450	.	+	.	ID=gene-PKHYL_RS08395;Name=PKHYL_RS08395;end_range=1575450,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08395;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1574809	1575450	.	+	0	ID=cds-PKHYL_RS08395;Parent=gene-PKHYL_RS08395;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=1575450,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905479.1;locus_tag=PKHYL_RS08395;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1576305	1576748	.	-	.	ID=gene-PKHYL_RS08400;Name=PKHYL_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08400;old_locus_tag=PKHYL_20320
NZ_AP019516.1	Protein Homology	CDS	1576305	1576748	.	-	0	ID=cds-WP_240366462.1;Parent=gene-PKHYL_RS08400;Dbxref=Genbank:WP_240366462.1;Name=WP_240366462.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.2;locus_tag=PKHYL_RS08400;product=Fic family protein;protein_id=WP_240366462.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1576795	1576923	.	-	.	ID=gene-PKHYL_RS08405;Name=PKHYL_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08405
NZ_AP019516.1	Protein Homology	CDS	1576795	1576923	.	-	0	ID=cds-WP_240366463.1;Parent=gene-PKHYL_RS08405;Dbxref=Genbank:WP_240366463.1;Name=WP_240366463.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024706.2;locus_tag=PKHYL_RS08405;product=hypothetical protein;protein_id=WP_240366463.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1577004	1577159	.	-	.	ID=gene-PKHYL_RS08410;Name=PKHYL_RS08410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08410;partial=true;pseudo=true;start_range=.,1577004
NZ_AP019516.1	Protein Homology	CDS	1577004	1577159	.	-	0	ID=cds-PKHYL_RS08410;Parent=gene-PKHYL_RS08410;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024706.2;locus_tag=PKHYL_RS08410;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1577004;transl_table=11
NZ_AP019516.1	RefSeq	gene	1577369	1577542	.	-	.	ID=gene-PKHYL_RS08415;Name=PKHYL_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08415;old_locus_tag=PKHYL_20340
NZ_AP019516.1	GeneMarkS-2+	CDS	1577369	1577542	.	-	0	ID=cds-WP_156770951.1;Parent=gene-PKHYL_RS08415;Dbxref=Genbank:WP_156770951.1;Name=WP_156770951.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08415;product=hypothetical protein;protein_id=WP_156770951.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1577781	1577978	.	+	.	ID=gene-PKHYL_RS08420;Name=PKHYL_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08420;old_locus_tag=PKHYL_20350
NZ_AP019516.1	Protein Homology	CDS	1577781	1577978	.	+	0	ID=cds-WP_227517172.1;Parent=gene-PKHYL_RS08420;Dbxref=Genbank:WP_227517172.1;Name=WP_227517172.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016843.2;locus_tag=PKHYL_RS08420;product=HPP family protein;protein_id=WP_227517172.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1578074	1578622	.	-	.	ID=gene-PKHYL_RS08425;Name=PKHYL_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08425;old_locus_tag=PKHYL_20360
NZ_AP019516.1	Protein Homology	CDS	1578074	1578622	.	-	0	ID=cds-WP_240366464.1;Parent=gene-PKHYL_RS08425;Dbxref=Genbank:WP_240366464.1;Name=WP_240366464.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012382.2;locus_tag=PKHYL_RS08425;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_240366464.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1578612	1579475	.	-	.	ID=gene-PKHYL_RS08430;Name=PKHYL_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08430;old_locus_tag=PKHYL_20370
NZ_AP019516.1	Protein Homology	CDS	1578612	1579475	.	-	0	ID=cds-WP_240366465.1;Parent=gene-PKHYL_RS08430;Dbxref=Genbank:WP_240366465.1;Name=WP_240366465.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012382.2;locus_tag=PKHYL_RS08430;product=PLP-dependent aminotransferase family protein;protein_id=WP_240366465.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1579687	1580277	.	+	.	ID=gene-PKHYL_RS08435;Name=PKHYL_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08435;old_locus_tag=PKHYL_20380
NZ_AP019516.1	Protein Homology	CDS	1579687	1580277	.	+	0	ID=cds-WP_240366512.1;Parent=gene-PKHYL_RS08435;Dbxref=Genbank:WP_240366512.1;Name=WP_240366512.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013088.2;locus_tag=PKHYL_RS08435;product=EamA family transporter;protein_id=WP_240366512.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1580252	1580593	.	+	.	ID=gene-PKHYL_RS08440;Name=PKHYL_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08440;old_locus_tag=PKHYL_20390
NZ_AP019516.1	Protein Homology	CDS	1580252	1580593	.	+	0	ID=cds-WP_240366466.1;Parent=gene-PKHYL_RS08440;Dbxref=Genbank:WP_240366466.1;Name=WP_240366466.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013088.2;locus_tag=PKHYL_RS08440;product=EamA family transporter;protein_id=WP_240366466.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1580590	1580841	.	-	.	ID=gene-PKHYL_RS08445;Name=PKHYL_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08445;old_locus_tag=PKHYL_20400
NZ_AP019516.1	GeneMarkS-2+	CDS	1580590	1580841	.	-	0	ID=cds-WP_240366467.1;Parent=gene-PKHYL_RS08445;Dbxref=Genbank:WP_240366467.1;Name=WP_240366467.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08445;product=hypothetical protein;protein_id=WP_240366467.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1581578	1581748	.	+	.	ID=gene-PKHYL_RS08450;Name=PKHYL_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08450;old_locus_tag=PKHYL_20410
NZ_AP019516.1	GeneMarkS-2+	CDS	1581578	1581748	.	+	0	ID=cds-WP_240366468.1;Parent=gene-PKHYL_RS08450;Dbxref=Genbank:WP_240366468.1;Name=WP_240366468.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08450;product=hypothetical protein;protein_id=WP_240366468.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1581745	1582851	.	+	.	ID=gene-PKHYL_RS08455;Name=PKHYL_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08455;old_locus_tag=PKHYL_20420
NZ_AP019516.1	Protein Homology	CDS	1581745	1582851	.	+	0	ID=cds-WP_240366469.1;Parent=gene-PKHYL_RS08455;Dbxref=Genbank:WP_240366469.1;Name=WP_240366469.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=PKHYL_RS08455;product=tyrosine-type recombinase/integrase;protein_id=WP_240366469.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1583085	1584209	.	+	.	ID=gene-PKHYL_RS17465;Name=PKHYL_RS17465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17465;old_locus_tag=PKHYL_20440;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1583085	1584209	.	+	0	ID=cds-PKHYL_RS17465;Parent=gene-PKHYL_RS17465;Note=internal stop;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: protein motif:HMM:NF012532.2;locus_tag=PKHYL_RS17465;product=phosphoenolpyruvate carboxylase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1584224	1585597	.	+	.	ID=gene-PKHYL_RS17470;Name=PKHYL_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17470;old_locus_tag=PKHYL_20450
NZ_AP019516.1	Protein Homology	CDS	1584224	1585597	.	+	0	ID=cds-WP_269778318.1;Parent=gene-PKHYL_RS17470;Dbxref=Genbank:WP_269778318.1;Name=WP_269778318.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: protein motif:HMM:NF012532.2;locus_tag=PKHYL_RS17470;product=phosphoenolpyruvate carboxylase;protein_id=WP_269778318.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1585563	1585871	.	+	.	ID=gene-PKHYL_RS17475;Name=PKHYL_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17475;old_locus_tag=PKHYL_20460
NZ_AP019516.1	Protein Homology	CDS	1585563	1585871	.	+	0	ID=cds-WP_269778309.1;Parent=gene-PKHYL_RS17475;Dbxref=Genbank:WP_269778309.1;Name=WP_269778309.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: protein motif:HMM:NF012532.2;locus_tag=PKHYL_RS17475;product=phosphoenolpyruvate carboxylase;protein_id=WP_269778309.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1586053	1587027	.	-	.	ID=gene-PKHYL_RS08465;Name=PKHYL_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08465;old_locus_tag=PKHYL_20470
NZ_AP019516.1	GeneMarkS-2+	CDS	1586053	1587027	.	-	0	ID=cds-WP_071001560.1;Parent=gene-PKHYL_RS08465;Dbxref=Genbank:WP_071001560.1;Name=WP_071001560.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08465;product=hypothetical protein;protein_id=WP_071001560.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1587268	1588281	.	+	.	ID=gene-PKHYL_RS08470;Name=PKHYL_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08470;old_locus_tag=PKHYL_20480
NZ_AP019516.1	Protein Homology	CDS	1587268	1588281	.	+	0	ID=cds-WP_071001559.1;Parent=gene-PKHYL_RS08470;Dbxref=Genbank:WP_071001559.1;Name=WP_071001559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200398.1;locus_tag=PKHYL_RS08470;product=LysR family transcriptional regulator;protein_id=WP_071001559.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1588598	1589884	.	+	.	ID=gene-PKHYL_RS08475;Name=PKHYL_RS08475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08475;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1588598	1589884	.	+	0	ID=cds-PKHYL_RS08475;Parent=gene-PKHYL_RS08475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200402.1;locus_tag=PKHYL_RS08475;product=divalent metal cation transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1590245	1591138	.	+	.	ID=gene-PKHYL_RS08480;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=PKHYL_RS08480;old_locus_tag=PKHYL_20510
NZ_AP019516.1	Protein Homology	CDS	1590245	1591138	.	+	0	ID=cds-WP_071001557.1;Parent=gene-PKHYL_RS08480;Dbxref=Genbank:WP_071001557.1;Name=WP_071001557.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004830929.1;locus_tag=PKHYL_RS08480;product=methylisocitrate lyase;protein_id=WP_071001557.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1591200	1592328	.	+	.	ID=gene-PKHYL_RS08485;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=pseudogene;locus_tag=PKHYL_RS08485;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1591200	1592328	.	+	0	ID=cds-PKHYL_RS08485;Parent=gene-PKHYL_RS08485;Note=frameshifted;Ontology_term=GO:0050440;gbkey=CDS;gene=prpC;go_function=2-methylcitrate synthase activity|0050440||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443509.1;locus_tag=PKHYL_RS08485;product=2-methylcitrate synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1592639	1595247	.	+	.	ID=gene-PKHYL_RS08490;Name=acnD;gbkey=Gene;gene=acnD;gene_biotype=pseudogene;locus_tag=PKHYL_RS08490;partial=true;pseudo=true;start_range=.,1592639
NZ_AP019516.1	Protein Homology	CDS	1592639	1595247	.	+	0	ID=cds-PKHYL_RS08490;Parent=gene-PKHYL_RS08490;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019629,GO:0047456;gbkey=CDS;gene=acnD;go_function=2-methylisocitrate dehydratase activity|0047456||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004785149.1;locus_tag=PKHYL_RS08490;partial=true;product=Fe/S-dependent 2-methylisocitrate dehydratase AcnD;pseudo=true;start_range=.,1592639;transl_table=11
NZ_AP019516.1	RefSeq	gene	1595449	1595688	.	+	.	ID=gene-PKHYL_RS08495;Name=PKHYL_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08495;old_locus_tag=PKHYL_20590
NZ_AP019516.1	Protein Homology	CDS	1595449	1595688	.	+	0	ID=cds-WP_093070906.1;Parent=gene-PKHYL_RS08495;Dbxref=Genbank:WP_093070906.1;Name=WP_093070906.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443507.1;locus_tag=PKHYL_RS08495;product=type II toxin-antitoxin system prevent-host-death family antitoxin;protein_id=WP_093070906.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1595790	1596635	.	-	.	ID=gene-PKHYL_RS08500;Name=PKHYL_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08500;old_locus_tag=PKHYL_20600
NZ_AP019516.1	GeneMarkS-2+	CDS	1595790	1596635	.	-	0	ID=cds-WP_240364928.1;Parent=gene-PKHYL_RS08500;Dbxref=Genbank:WP_240364928.1;Name=WP_240364928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08500;product=hypothetical protein;protein_id=WP_240364928.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1596705	1597939	.	+	.	ID=gene-PKHYL_RS08505;Name=prpF;gbkey=Gene;gene=prpF;gene_biotype=pseudogene;locus_tag=PKHYL_RS08505;old_locus_tag=PKHYL_20610;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1596705	1597939	.	+	0	ID=cds-PKHYL_RS08505;Parent=gene-PKHYL_RS08505;Note=frameshifted;Ontology_term=GO:0019629;gbkey=CDS;gene=prpF;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960456.1;locus_tag=PKHYL_RS08505;product=2-methylaconitate cis-trans isomerase PrpF;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1597978	1599830	.	+	.	ID=gene-PKHYL_RS08510;Name=PKHYL_RS08510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08510;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1597978	1599830	.	+	0	ID=cds-PKHYL_RS08510;Parent=gene-PKHYL_RS08510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393471.1;locus_tag=PKHYL_RS08510;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1599834	1600529	.	+	.	ID=gene-PKHYL_RS08515;Name=PKHYL_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08515;old_locus_tag=PKHYL_20650
NZ_AP019516.1	Protein Homology	CDS	1599834	1600529	.	+	0	ID=cds-WP_240364929.1;Parent=gene-PKHYL_RS08515;Dbxref=Genbank:WP_240364929.1;Name=WP_240364929.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513636.1;locus_tag=PKHYL_RS08515;product=GNAT family N-acetyltransferase;protein_id=WP_240364929.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1600682	1601731	.	+	.	ID=gene-PKHYL_RS08520;Name=prpD;gbkey=Gene;gene=prpD;gene_biotype=protein_coding;locus_tag=PKHYL_RS08520;old_locus_tag=PKHYL_20660
NZ_AP019516.1	Protein Homology	CDS	1600682	1601731	.	+	0	ID=cds-WP_269778125.1;Parent=gene-PKHYL_RS08520;Dbxref=Genbank:WP_269778125.1;Name=WP_269778125.1;Ontology_term=GO:0019629,GO:0047547;gbkey=CDS;gene=prpD;go_function=2-methylcitrate dehydratase activity|0047547||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: protein motif:HMM:TIGR02330.1;locus_tag=PKHYL_RS08520;product=2-methylcitrate dehydratase;protein_id=WP_269778125.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1601758	1602221	.	+	.	ID=gene-PKHYL_RS17480;Name=PKHYL_RS17480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17480;old_locus_tag=PKHYL_20670;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1601758	1602221	.	+	0	ID=cds-PKHYL_RS17480;Parent=gene-PKHYL_RS17480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040249.1;locus_tag=PKHYL_RS17480;product=hypothetical protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1602261	1602500	.	-	.	ID=gene-PKHYL_RS08525;Name=PKHYL_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08525;old_locus_tag=PKHYL_20680
NZ_AP019516.1	GeneMarkS-2+	CDS	1602261	1602500	.	-	0	ID=cds-WP_240364930.1;Parent=gene-PKHYL_RS08525;Dbxref=Genbank:WP_240364930.1;Name=WP_240364930.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08525;product=hypothetical protein;protein_id=WP_240364930.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1602542	1602718	.	-	.	ID=gene-PKHYL_RS08530;Name=PKHYL_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08530
NZ_AP019516.1	GeneMarkS-2+	CDS	1602542	1602718	.	-	0	ID=cds-WP_240364931.1;Parent=gene-PKHYL_RS08530;Dbxref=Genbank:WP_240364931.1;Name=WP_240364931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08530;product=hypothetical protein;protein_id=WP_240364931.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1602705	1603040	.	-	.	ID=gene-PKHYL_RS08535;Name=PKHYL_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08535;old_locus_tag=PKHYL_20690
NZ_AP019516.1	Protein Homology	CDS	1602705	1603040	.	-	0	ID=cds-WP_240364932.1;Parent=gene-PKHYL_RS08535;Dbxref=Genbank:WP_240364932.1;Name=WP_240364932.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020243.2;locus_tag=PKHYL_RS08535;product=KR domain-containing protein;protein_id=WP_240364932.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1603244	1604632	.	+	.	ID=gene-PKHYL_RS08540;Name=PKHYL_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08540;old_locus_tag=PKHYL_20700
NZ_AP019516.1	Protein Homology	CDS	1603244	1604632	.	+	0	ID=cds-WP_071001547.1;Parent=gene-PKHYL_RS08540;Dbxref=Genbank:WP_071001547.1;Name=WP_071001547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007115700.1;locus_tag=PKHYL_RS08540;product=DUF2868 domain-containing protein;protein_id=WP_071001547.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1604754	1605692	.	+	.	ID=gene-PKHYL_RS08545;Name=PKHYL_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08545;old_locus_tag=PKHYL_20710
NZ_AP019516.1	Protein Homology	CDS	1604754	1605692	.	+	0	ID=cds-WP_240364933.1;Parent=gene-PKHYL_RS08545;Dbxref=Genbank:WP_240364933.1;Name=WP_240364933.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016041.2;locus_tag=PKHYL_RS08545;product=sterol desaturase family protein;protein_id=WP_240364933.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1606110	1607428	.	+	.	ID=gene-PKHYL_RS08550;Name=PKHYL_RS08550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08550;old_locus_tag=PKHYL_20720;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1606110	1607428	.	+	0	ID=cds-PKHYL_RS08550;Parent=gene-PKHYL_RS08550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023407.2;locus_tag=PKHYL_RS08550;product=DUF3482 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1607585	1608610	.	-	.	ID=gene-PKHYL_RS08555;Name=PKHYL_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08555;old_locus_tag=PKHYL_20730
NZ_AP019516.1	Protein Homology	CDS	1607585	1608610	.	-	0	ID=cds-WP_240364934.1;Parent=gene-PKHYL_RS08555;Dbxref=Genbank:WP_240364934.1;Name=WP_240364934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443498.1;locus_tag=PKHYL_RS08555;product=ArsA family ATPase;protein_id=WP_240364934.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1608663	1608974	.	-	.	ID=gene-PKHYL_RS08560;Name=PKHYL_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08560;old_locus_tag=PKHYL_20740
NZ_AP019516.1	Protein Homology	CDS	1608663	1608974	.	-	0	ID=cds-WP_093070887.1;Parent=gene-PKHYL_RS08560;Dbxref=Genbank:WP_093070887.1;Name=WP_093070887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200452.1;locus_tag=PKHYL_RS08560;product=cory-CC-star protein;protein_id=WP_093070887.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1609090	1610601	.	-	.	ID=gene-PKHYL_RS08565;Name=PKHYL_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08565;old_locus_tag=PKHYL_20750
NZ_AP019516.1	Protein Homology	CDS	1609090	1610601	.	-	0	ID=cds-WP_240364935.1;Parent=gene-PKHYL_RS08565;Dbxref=Genbank:WP_240364935.1;Name=WP_240364935.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014598.2;locus_tag=PKHYL_RS08565;product=carbon starvation protein A;protein_id=WP_240364935.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1611079	1611747	.	+	.	ID=gene-PKHYL_RS08570;Name=PKHYL_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08570;old_locus_tag=PKHYL_20760
NZ_AP019516.1	Protein Homology	CDS	1611079	1611747	.	+	0	ID=cds-WP_071001543.1;Parent=gene-PKHYL_RS08570;Dbxref=Genbank:WP_071001543.1;Name=WP_071001543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443496.1;locus_tag=PKHYL_RS08570;product=hypothetical protein;protein_id=WP_071001543.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1611840	1612404	.	+	.	ID=gene-PKHYL_RS08575;Name=PKHYL_RS08575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08575;old_locus_tag=PKHYL_20770;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1611840	1612404	.	+	0	ID=cds-PKHYL_RS08575;Parent=gene-PKHYL_RS08575;Note=frameshifted;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513626.1;locus_tag=PKHYL_RS08575;product=hypoxanthine-guanine phosphoribosyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1612486	1612785	.	-	.	ID=gene-PKHYL_RS08580;Name=PKHYL_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08580;old_locus_tag=PKHYL_20790
NZ_AP019516.1	Protein Homology	CDS	1612486	1612785	.	-	0	ID=cds-WP_240364936.1;Parent=gene-PKHYL_RS08580;Dbxref=Genbank:WP_240364936.1;Name=WP_240364936.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013601.2;locus_tag=PKHYL_RS08580;product=ATP-binding domain-containing protein;protein_id=WP_240364936.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1612722	1613924	.	-	.	ID=gene-PKHYL_RS08585;Name=PKHYL_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08585;old_locus_tag=PKHYL_20800
NZ_AP019516.1	Protein Homology	CDS	1612722	1613924	.	-	0	ID=cds-WP_240364937.1;Parent=gene-PKHYL_RS08585;Dbxref=Genbank:WP_240364937.1;Name=WP_240364937.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024991.2;locus_tag=PKHYL_RS08585;product=AAA family ATPase;protein_id=WP_240364937.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1614124	1614684	.	-	.	ID=gene-PKHYL_RS08590;Name=PKHYL_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08590;old_locus_tag=PKHYL_20820
NZ_AP019516.1	GeneMarkS-2+	CDS	1614124	1614684	.	-	0	ID=cds-WP_240364938.1;Parent=gene-PKHYL_RS08590;Dbxref=Genbank:WP_240364938.1;Name=WP_240364938.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08590;product=hypothetical protein;protein_id=WP_240364938.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1614759	1617233	.	-	.	ID=gene-PKHYL_RS08595;Name=PKHYL_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08595;old_locus_tag=PKHYL_20830
NZ_AP019516.1	Protein Homology	CDS	1614759	1617233	.	-	0	ID=cds-WP_240366513.1;Parent=gene-PKHYL_RS08595;Dbxref=Genbank:WP_240366513.1;Name=WP_240366513.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024754.2;locus_tag=PKHYL_RS08595;product=PD-(D/E)XK nuclease family protein;protein_id=WP_240366513.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1617292	1617597	.	-	.	ID=gene-PKHYL_RS17485;Name=PKHYL_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17485;old_locus_tag=PKHYL_20840
NZ_AP019516.1	GeneMarkS-2+	CDS	1617292	1617597	.	-	0	ID=cds-WP_269778126.1;Parent=gene-PKHYL_RS17485;Dbxref=Genbank:WP_269778126.1;Name=WP_269778126.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17485;product=UvrD-helicase domain-containing protein;protein_id=WP_269778126.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1617560	1618249	.	-	.	ID=gene-PKHYL_RS17490;Name=PKHYL_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17490;old_locus_tag=PKHYL_20850
NZ_AP019516.1	Protein Homology	CDS	1617560	1618249	.	-	0	ID=cds-WP_269778127.1;Parent=gene-PKHYL_RS17490;Dbxref=Genbank:WP_269778127.1;Name=WP_269778127.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012789.2;locus_tag=PKHYL_RS17490;product=UvrD-helicase domain-containing protein;protein_id=WP_269778127.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1618239	1618763	.	-	.	ID=gene-PKHYL_RS08605;Name=PKHYL_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08605;old_locus_tag=PKHYL_20860
NZ_AP019516.1	GeneMarkS-2+	CDS	1618239	1618763	.	-	0	ID=cds-WP_240364939.1;Parent=gene-PKHYL_RS08605;Dbxref=Genbank:WP_240364939.1;Name=WP_240364939.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08605;product=hypothetical protein;protein_id=WP_240364939.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1618711	1619133	.	-	.	ID=gene-PKHYL_RS08610;Name=PKHYL_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08610;old_locus_tag=PKHYL_20870
NZ_AP019516.1	Protein Homology	CDS	1618711	1619133	.	-	0	ID=cds-WP_240366514.1;Parent=gene-PKHYL_RS08610;Dbxref=Genbank:WP_240366514.1;Name=WP_240366514.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF024642.2;locus_tag=PKHYL_RS08610;product=UvrD-helicase domain-containing protein;protein_id=WP_240366514.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1619637	1620401	.	-	.	ID=gene-PKHYL_RS08615;Name=PKHYL_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08615;old_locus_tag=PKHYL_20880
NZ_AP019516.1	GeneMarkS-2+	CDS	1619637	1620401	.	-	0	ID=cds-WP_240364940.1;Parent=gene-PKHYL_RS08615;Dbxref=Genbank:WP_240364940.1;Name=WP_240364940.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08615;product=hypothetical protein;protein_id=WP_240364940.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1620564	1620773	.	+	.	ID=gene-PKHYL_RS08620;Name=PKHYL_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08620
NZ_AP019516.1	GeneMarkS-2+	CDS	1620564	1620773	.	+	0	ID=cds-WP_240364941.1;Parent=gene-PKHYL_RS08620;Dbxref=Genbank:WP_240364941.1;Name=WP_240364941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08620;product=hypothetical protein;protein_id=WP_240364941.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1620872	1621297	.	-	.	ID=gene-PKHYL_RS08625;Name=PKHYL_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08625;old_locus_tag=PKHYL_20890
NZ_AP019516.1	GeneMarkS-2+	CDS	1620872	1621297	.	-	0	ID=cds-WP_240366566.1;Parent=gene-PKHYL_RS08625;Dbxref=Genbank:WP_240366566.1;Name=WP_240366566.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08625;product=hypothetical protein;protein_id=WP_240366566.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1621269	1621337	.	-	.	ID=gene-PKHYL_RS08630;Name=PKHYL_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08630
NZ_AP019516.1	Protein Homology	CDS	1621269	1621337	.	-	0	ID=cds-WP_240366515.1;Parent=gene-PKHYL_RS08630;Dbxref=Genbank:WP_240366515.1;Name=WP_240366515.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016169.2;locus_tag=PKHYL_RS08630;product=hypothetical protein;protein_id=WP_240366515.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1621334	1621630	.	-	.	ID=gene-PKHYL_RS08635;Name=PKHYL_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08635;old_locus_tag=PKHYL_20900
NZ_AP019516.1	GeneMarkS-2+	CDS	1621334	1621630	.	-	0	ID=cds-WP_240366567.1;Parent=gene-PKHYL_RS08635;Dbxref=Genbank:WP_240366567.1;Name=WP_240366567.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08635;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_240366567.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1621608	1622978	.	-	.	ID=gene-PKHYL_RS08640;Name=PKHYL_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08640;old_locus_tag=PKHYL_20910
NZ_AP019516.1	Protein Homology	CDS	1621608	1622978	.	-	0	ID=cds-WP_269778128.1;Parent=gene-PKHYL_RS08640;Dbxref=Genbank:WP_269778128.1;Name=WP_269778128.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016169.2;locus_tag=PKHYL_RS08640;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_269778128.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1622963	1623187	.	-	.	ID=gene-PKHYL_RS17495;Name=PKHYL_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17495;old_locus_tag=PKHYL_20920
NZ_AP019516.1	Protein Homology	CDS	1622963	1623187	.	-	0	ID=cds-WP_269778129.1;Parent=gene-PKHYL_RS17495;Dbxref=Genbank:WP_269778129.1;Name=WP_269778129.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016169.2;locus_tag=PKHYL_RS17495;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_269778129.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1623217	1623450	.	-	.	ID=gene-PKHYL_RS08645;Name=PKHYL_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08645;old_locus_tag=PKHYL_20930
NZ_AP019516.1	GeneMarkS-2+	CDS	1623217	1623450	.	-	0	ID=cds-WP_240364942.1;Parent=gene-PKHYL_RS08645;Dbxref=Genbank:WP_240364942.1;Name=WP_240364942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08645;product=hypothetical protein;protein_id=WP_240364942.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1623419	1623559	.	-	.	ID=gene-PKHYL_RS08650;Name=PKHYL_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08650
NZ_AP019516.1	GeneMarkS-2+	CDS	1623419	1623559	.	-	0	ID=cds-WP_240366568.1;Parent=gene-PKHYL_RS08650;Dbxref=Genbank:WP_240366568.1;Name=WP_240366568.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08650;product=hypothetical protein;protein_id=WP_240366568.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1623525	1623968	.	-	.	ID=gene-PKHYL_RS08655;Name=PKHYL_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08655;old_locus_tag=PKHYL_20940
NZ_AP019516.1	Protein Homology	CDS	1623525	1623968	.	-	0	ID=cds-WP_240364943.1;Parent=gene-PKHYL_RS08655;Dbxref=Genbank:WP_240364943.1;Name=WP_240364943.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016169.2;locus_tag=PKHYL_RS08655;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_240364943.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1624380	1624880	.	+	.	ID=gene-PKHYL_RS08660;Name=PKHYL_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08660;old_locus_tag=PKHYL_20950
NZ_AP019516.1	Protein Homology	CDS	1624380	1624880	.	+	0	ID=cds-WP_071001538.1;Parent=gene-PKHYL_RS08660;Dbxref=Genbank:WP_071001538.1;Name=WP_071001538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280402.1;locus_tag=PKHYL_RS08660;product=hypothetical protein;protein_id=WP_071001538.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1624954	1625787	.	+	.	ID=gene-PKHYL_RS08665;Name=PKHYL_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08665;old_locus_tag=PKHYL_20960
NZ_AP019516.1	Protein Homology	CDS	1624954	1625787	.	+	0	ID=cds-WP_071001537.1;Parent=gene-PKHYL_RS08665;Dbxref=Genbank:WP_071001537.1;Name=WP_071001537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280403.1;locus_tag=PKHYL_RS08665;product=hypothetical protein;protein_id=WP_071001537.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1625858	1625933	.	+	.	ID=gene-PKHYL_RS08670;Name=PKHYL_RS08670;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS08670;old_locus_tag=PKHYL_t00250
NZ_AP019516.1	tRNAscan-SE	tRNA	1625858	1625933	.	+	.	ID=rna-PKHYL_RS08670;Parent=gene-PKHYL_RS08670;anticodon=(pos:1625892..1625894);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS08670;product=tRNA-Arg
NZ_AP019516.1	tRNAscan-SE	exon	1625858	1625933	.	+	.	ID=exon-PKHYL_RS08670-1;Parent=rna-PKHYL_RS08670;anticodon=(pos:1625892..1625894);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS08670;product=tRNA-Arg
NZ_AP019516.1	RefSeq	gene	1626100	1626534	.	+	.	ID=gene-PKHYL_RS08675;Name=PKHYL_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08675;old_locus_tag=PKHYL_20970
NZ_AP019516.1	Protein Homology	CDS	1626100	1626534	.	+	0	ID=cds-WP_240364944.1;Parent=gene-PKHYL_RS08675;Dbxref=Genbank:WP_240364944.1;Name=WP_240364944.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024750.2;locus_tag=PKHYL_RS08675;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_240364944.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1626644	1626915	.	+	.	ID=gene-PKHYL_RS08680;Name=PKHYL_RS08680;end_range=1626915,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08680;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1626644	1626915	.	+	0	ID=cds-PKHYL_RS08680;Parent=gene-PKHYL_RS08680;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1626915,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612080.1;locus_tag=PKHYL_RS08680;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1627024	1627227	.	+	.	ID=gene-PKHYL_RS08685;Name=PKHYL_RS08685;end_range=1627227,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08685;partial=true;pseudo=true;start_range=.,1627024
NZ_AP019516.1	Protein Homology	CDS	1627024	1627227	.	+	0	ID=cds-PKHYL_RS08685;Parent=gene-PKHYL_RS08685;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1627227,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612080.1;locus_tag=PKHYL_RS08685;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1627024;transl_table=11
NZ_AP019516.1	RefSeq	gene	1627265	1627750	.	-	.	ID=gene-PKHYL_RS08690;Name=PKHYL_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08690;old_locus_tag=PKHYL_20990
NZ_AP019516.1	Protein Homology	CDS	1627265	1627750	.	-	0	ID=cds-WP_058025818.1;Parent=gene-PKHYL_RS08690;Dbxref=Genbank:WP_058025818.1;Name=WP_058025818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443003.1;locus_tag=PKHYL_RS08690;product=DUF305 domain-containing protein;protein_id=WP_058025818.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1627778	1628401	.	-	.	ID=gene-PKHYL_RS08695;Name=PKHYL_RS08695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08695;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1627778	1628401	.	-	0	ID=cds-PKHYL_RS08695;Parent=gene-PKHYL_RS08695;Note=internal stop;Ontology_term=GO:0006878,GO:0005507,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=copper ion binding|0005507||IEA;go_process=cellular copper ion homeostasis|0006878||IEA;inference=COORDINATES: protein motif:HMM:NF017119.2;locus_tag=PKHYL_RS08695;product=copper resistance protein B;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1628421	1628801	.	-	.	ID=gene-PKHYL_RS17500;Name=PKHYL_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17500;old_locus_tag=PKHYL_21020
NZ_AP019516.1	GeneMarkS-2+	CDS	1628421	1628801	.	-	0	ID=cds-WP_269778130.1;Parent=gene-PKHYL_RS17500;Dbxref=Genbank:WP_269778130.1;Name=WP_269778130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17500;product=hypothetical protein;protein_id=WP_269778130.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1628827	1629492	.	-	.	ID=gene-PKHYL_RS17505;Name=PKHYL_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17505;old_locus_tag=PKHYL_21030
NZ_AP019516.1	Protein Homology	CDS	1628827	1629492	.	-	0	ID=cds-WP_269778131.1;Parent=gene-PKHYL_RS17505;Dbxref=Genbank:WP_269778131.1;Name=WP_269778131.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF019351.2;locus_tag=PKHYL_RS17505;product=multicopper oxidase domain-containing protein;protein_id=WP_269778131.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1629398	1630528	.	-	.	ID=gene-PKHYL_RS08705;Name=PKHYL_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08705;old_locus_tag=PKHYL_21040
NZ_AP019516.1	Protein Homology	CDS	1629398	1630528	.	-	0	ID=cds-WP_269778132.1;Parent=gene-PKHYL_RS08705;Dbxref=Genbank:WP_269778132.1;Name=WP_269778132.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: protein motif:HMM:NF012612.2;locus_tag=PKHYL_RS08705;product=multicopper oxidase domain-containing protein;protein_id=WP_269778132.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1630646	1631284	.	-	.	ID=gene-PKHYL_RS08710;Name=PKHYL_RS08710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08710;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1630646	1631284	.	-	0	ID=cds-PKHYL_RS08710;Parent=gene-PKHYL_RS08710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959987.1;locus_tag=PKHYL_RS08710;product=DUF411 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1631420	1632013	.	-	.	ID=gene-PKHYL_RS08715;Name=PKHYL_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08715;old_locus_tag=PKHYL_21080
NZ_AP019516.1	Protein Homology	CDS	1631420	1632013	.	-	0	ID=cds-WP_071001532.1;Parent=gene-PKHYL_RS08715;Dbxref=Genbank:WP_071001532.1;Name=WP_071001532.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200943.1;locus_tag=PKHYL_RS08715;product=c-type cytochrome;protein_id=WP_071001532.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1632244	1632378	.	-	.	ID=gene-PKHYL_RS17510;Name=PKHYL_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17510
NZ_AP019516.1	GeneMarkS-2+	CDS	1632244	1632378	.	-	0	ID=cds-WP_269778133.1;Parent=gene-PKHYL_RS17510;Dbxref=Genbank:WP_269778133.1;Name=WP_269778133.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17510;product=hypothetical protein;protein_id=WP_269778133.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1632568	1633289	.	+	.	ID=gene-PKHYL_RS08720;Name=PKHYL_RS08720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08720;old_locus_tag=PKHYL_21090;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1632568	1633289	.	+	0	ID=cds-PKHYL_RS08720;Parent=gene-PKHYL_RS08720;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200948.1;locus_tag=PKHYL_RS08720;product=heavy metal response regulator transcription factor;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1633291	1634343	.	+	.	ID=gene-PKHYL_RS08725;Name=PKHYL_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08725;old_locus_tag=PKHYL_21100
NZ_AP019516.1	Protein Homology	CDS	1633291	1634343	.	+	0	ID=cds-WP_240366516.1;Parent=gene-PKHYL_RS08725;Dbxref=Genbank:WP_240366516.1;Name=WP_240366516.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF012722.2;locus_tag=PKHYL_RS08725;product=HAMP domain-containing protein;protein_id=WP_240366516.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1634411	1634761	.	+	.	ID=gene-PKHYL_RS08730;Name=PKHYL_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08730;old_locus_tag=PKHYL_21110
NZ_AP019516.1	Protein Homology	CDS	1634411	1634761	.	+	0	ID=cds-WP_240364945.1;Parent=gene-PKHYL_RS08730;Dbxref=Genbank:WP_240364945.1;Name=WP_240364945.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=PKHYL_RS08730;product=ATP-binding protein;protein_id=WP_240364945.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1635068	1635214	.	-	.	ID=gene-PKHYL_RS08735;Name=PKHYL_RS08735;end_range=1635214,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08735;partial=true;pseudo=true;start_range=.,1635068
NZ_AP019516.1	Protein Homology	CDS	1635068	1635214	.	-	0	ID=cds-PKHYL_RS08735;Parent=gene-PKHYL_RS08735;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1635214,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611519.1;locus_tag=PKHYL_RS08735;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1635068;transl_table=11
NZ_AP019516.1	RefSeq	gene	1635460	1635534	.	+	.	ID=gene-PKHYL_RS08740;Name=pqqA;gbkey=Gene;gene=pqqA;gene_biotype=protein_coding;locus_tag=PKHYL_RS08740
NZ_AP019516.1	Protein Homology	CDS	1635460	1635534	.	+	0	ID=cds-WP_143007430.1;Parent=gene-PKHYL_RS08740;Dbxref=Genbank:WP_143007430.1;Name=WP_143007430.1;Ontology_term=GO:0018189,GO:0003824;gbkey=CDS;gene=pqqA;go_function=catalytic activity|0003824||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: protein motif:HMM:NF019654.2;locus_tag=PKHYL_RS08740;product=pyrroloquinoline quinone precursor peptide PqqA;protein_id=WP_143007430.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1635612	1636523	.	+	.	ID=gene-PKHYL_RS08745;Name=pqqB;gbkey=Gene;gene=pqqB;gene_biotype=protein_coding;locus_tag=PKHYL_RS08745;old_locus_tag=PKHYL_21120
NZ_AP019516.1	Protein Homology	CDS	1635612	1636523	.	+	0	ID=cds-WP_071001528.1;Parent=gene-PKHYL_RS08745;Dbxref=Genbank:WP_071001528.1;Name=WP_071001528.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqB;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004995395.1;locus_tag=PKHYL_RS08745;product=pyrroloquinoline quinone biosynthesis protein PqqB;protein_id=WP_071001528.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1636554	1637312	.	+	.	ID=gene-PKHYL_RS08750;Name=pqqC;gbkey=Gene;gene=pqqC;gene_biotype=protein_coding;locus_tag=PKHYL_RS08750;old_locus_tag=PKHYL_21130
NZ_AP019516.1	Protein Homology	CDS	1636554	1637312	.	+	0	ID=cds-WP_071003603.1;Parent=gene-PKHYL_RS08750;Dbxref=Genbank:WP_071003603.1;Name=WP_071003603.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqC;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004995396.1;locus_tag=PKHYL_RS08750;product=pyrroloquinoline-quinone synthase PqqC;protein_id=WP_071003603.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1637309	1637606	.	+	.	ID=gene-PKHYL_RS08755;Name=pqqD;gbkey=Gene;gene=pqqD;gene_biotype=pseudogene;locus_tag=PKHYL_RS08755;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1637309	1637606	.	+	0	ID=cds-PKHYL_RS08755;Parent=gene-PKHYL_RS08755;Note=frameshifted;Ontology_term=GO:0018189,GO:0048038;gbkey=CDS;gene=pqqD;go_function=quinone binding|0048038||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004781094.1;locus_tag=PKHYL_RS08755;product=pyrroloquinoline quinone biosynthesis peptide chaperone PqqD;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1637603	1638754	.	+	.	ID=gene-PKHYL_RS08760;Name=pqqE;gbkey=Gene;gene=pqqE;gene_biotype=protein_coding;locus_tag=PKHYL_RS08760;old_locus_tag=PKHYL_21160
NZ_AP019516.1	Protein Homology	CDS	1637603	1638754	.	+	0	ID=cds-WP_071001526.1;Parent=gene-PKHYL_RS08760;Dbxref=Genbank:WP_071001526.1;Name=WP_071001526.1;Ontology_term=GO:0018149,GO:0018189;gbkey=CDS;gene=pqqE;go_process=peptide cross-linking|0018149||IEA,pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005254636.1;locus_tag=PKHYL_RS08760;product=pyrroloquinoline quinone biosynthesis protein PqqE;protein_id=WP_071001526.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1638766	1639812	.	+	.	ID=gene-PKHYL_RS08765;Name=PKHYL_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08765;old_locus_tag=PKHYL_21170
NZ_AP019516.1	Protein Homology	CDS	1638766	1639812	.	+	0	ID=cds-WP_197496708.1;Parent=gene-PKHYL_RS08765;Dbxref=Genbank:WP_197496708.1;Name=WP_197496708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009391188.1;locus_tag=PKHYL_RS08765;product=dipeptidase;protein_id=WP_197496708.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1640291	1640871	.	-	.	ID=gene-PKHYL_RS08770;Name=PKHYL_RS08770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08770;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1640291	1640871	.	-	0	ID=cds-PKHYL_RS08770;Parent=gene-PKHYL_RS08770;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_071001643.1;locus_tag=PKHYL_RS08770;product=IS1595 family transposase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1640917	1641771	.	-	.	ID=gene-PKHYL_RS08775;Name=PKHYL_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08775;old_locus_tag=PKHYL_21200
NZ_AP019516.1	Protein Homology	CDS	1640917	1641771	.	-	0	ID=cds-WP_156770949.1;Parent=gene-PKHYL_RS08775;Dbxref=Genbank:WP_156770949.1;Name=WP_156770949.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012334.2;locus_tag=PKHYL_RS08775;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_156770949.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1642058	1642240	.	-	.	ID=gene-PKHYL_RS08780;Name=PKHYL_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08780;old_locus_tag=PKHYL_21210
NZ_AP019516.1	GeneMarkS-2+	CDS	1642058	1642240	.	-	0	ID=cds-WP_240364946.1;Parent=gene-PKHYL_RS08780;Dbxref=Genbank:WP_240364946.1;Name=WP_240364946.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08780;product=hypothetical protein;protein_id=WP_240364946.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1642212	1643084	.	-	.	ID=gene-PKHYL_RS08785;Name=PKHYL_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08785;old_locus_tag=PKHYL_21220
NZ_AP019516.1	Protein Homology	CDS	1642212	1643084	.	-	0	ID=cds-WP_240366517.1;Parent=gene-PKHYL_RS08785;Dbxref=Genbank:WP_240366517.1;Name=WP_240366517.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012471.2;locus_tag=PKHYL_RS08785;product=M14-type cytosolic carboxypeptidase;protein_id=WP_240366517.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1643018	1643185	.	-	.	ID=gene-PKHYL_RS08790;Name=PKHYL_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08790;old_locus_tag=PKHYL_21230
NZ_AP019516.1	Protein Homology	CDS	1643018	1643185	.	-	0	ID=cds-WP_240364947.1;Parent=gene-PKHYL_RS08790;Dbxref=Genbank:WP_240364947.1;Name=WP_240364947.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037031.2;locus_tag=PKHYL_RS08790;product=M14-type cytosolic carboxypeptidase;protein_id=WP_240364947.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1643509	1644254	.	-	.	ID=gene-PKHYL_RS08795;Name=PKHYL_RS08795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08795;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1643509	1644254	.	-	0	ID=cds-PKHYL_RS08795;Parent=gene-PKHYL_RS08795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014899.2;locus_tag=PKHYL_RS08795;product=class III extradiol ring-cleavage dioxygenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1644468	1644833	.	-	.	ID=gene-PKHYL_RS08800;Name=PKHYL_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08800;old_locus_tag=PKHYL_21260
NZ_AP019516.1	Protein Homology	CDS	1644468	1644833	.	-	0	ID=cds-WP_240366518.1;Parent=gene-PKHYL_RS08800;Dbxref=Genbank:WP_240366518.1;Name=WP_240366518.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019301.2;locus_tag=PKHYL_RS08800;product=DoxX family protein;protein_id=WP_240366518.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1645307	1645663	.	+	.	ID=gene-PKHYL_RS08805;Name=PKHYL_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08805;old_locus_tag=PKHYL_21280
NZ_AP019516.1	GeneMarkS-2+	CDS	1645307	1645663	.	+	0	ID=cds-WP_240364948.1;Parent=gene-PKHYL_RS08805;Dbxref=Genbank:WP_240364948.1;Name=WP_240364948.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08805;product=hypothetical protein;protein_id=WP_240364948.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1645632	1646303	.	+	.	ID=gene-PKHYL_RS08810;Name=PKHYL_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08810;old_locus_tag=PKHYL_21290
NZ_AP019516.1	Protein Homology	CDS	1645632	1646303	.	+	0	ID=cds-WP_240366519.1;Parent=gene-PKHYL_RS08810;Dbxref=Genbank:WP_240366519.1;Name=WP_240366519.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025736.2;locus_tag=PKHYL_RS08810;product=phosphatase PAP2 family protein;protein_id=WP_240366519.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1647115	1647711	.	-	.	ID=gene-PKHYL_RS08815;Name=PKHYL_RS08815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08815;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1647115	1647711	.	-	0	ID=cds-PKHYL_RS08815;Parent=gene-PKHYL_RS08815;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611454.1;locus_tag=PKHYL_RS08815;product=IS1595 family transposase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1647902	1648447	.	+	.	ID=gene-PKHYL_RS17515;Name=PKHYL_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17515;old_locus_tag=PKHYL_21310
NZ_AP019516.1	Protein Homology	CDS	1647902	1648447	.	+	0	ID=cds-WP_269778134.1;Parent=gene-PKHYL_RS17515;Dbxref=Genbank:WP_269778134.1;Name=WP_269778134.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=PKHYL_RS17515;product=LysR family transcriptional regulator;protein_id=WP_269778134.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1648431	1648817	.	+	.	ID=gene-PKHYL_RS17520;Name=PKHYL_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17520;old_locus_tag=PKHYL_21320
NZ_AP019516.1	Protein Homology	CDS	1648431	1648817	.	+	0	ID=cds-WP_269778135.1;Parent=gene-PKHYL_RS17520;Dbxref=Genbank:WP_269778135.1;Name=WP_269778135.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=PKHYL_RS17520;product=LysR substrate-binding domain-containing protein;protein_id=WP_269778135.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1648963	1649610	.	-	.	ID=gene-PKHYL_RS08825;Name=PKHYL_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08825;old_locus_tag=PKHYL_21330
NZ_AP019516.1	GeneMarkS-2+	CDS	1648963	1649610	.	-	0	ID=cds-WP_240364949.1;Parent=gene-PKHYL_RS08825;Dbxref=Genbank:WP_240364949.1;Name=WP_240364949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08825;product=hypothetical protein;protein_id=WP_240364949.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1649607	1649957	.	-	.	ID=gene-PKHYL_RS08830;Name=PKHYL_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08830;old_locus_tag=PKHYL_21340
NZ_AP019516.1	GeneMarkS-2+	CDS	1649607	1649957	.	-	0	ID=cds-WP_240364950.1;Parent=gene-PKHYL_RS08830;Dbxref=Genbank:WP_240364950.1;Name=WP_240364950.1;Ontology_term=GO:0055085,GO:0015288,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08830;product=porin;protein_id=WP_240364950.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1650180	1650635	.	-	.	ID=gene-PKHYL_RS08835;Name=PKHYL_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08835;old_locus_tag=PKHYL_21350
NZ_AP019516.1	Protein Homology	CDS	1650180	1650635	.	-	0	ID=cds-WP_240364951.1;Parent=gene-PKHYL_RS08835;Dbxref=Genbank:WP_240364951.1;Name=WP_240364951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513571.1;locus_tag=PKHYL_RS08835;product=acyl-CoA thioesterase;protein_id=WP_240364951.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1650764	1652488	.	-	.	ID=gene-PKHYL_RS08840;Name=PKHYL_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08840;old_locus_tag=PKHYL_21360
NZ_AP019516.1	Protein Homology	CDS	1650764	1652488	.	-	0	ID=cds-WP_240364952.1;Parent=gene-PKHYL_RS08840;Dbxref=Genbank:WP_240364952.1;Name=WP_240364952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280175.1;locus_tag=PKHYL_RS08840;product=fatty acid--CoA ligase;protein_id=WP_240364952.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1652550	1653752	.	-	.	ID=gene-PKHYL_RS08845;Name=PKHYL_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08845;old_locus_tag=PKHYL_21370
NZ_AP019516.1	Protein Homology	CDS	1652550	1653752	.	-	0	ID=cds-WP_240364953.1;Parent=gene-PKHYL_RS08845;Dbxref=Genbank:WP_240364953.1;Name=WP_240364953.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443433.1;locus_tag=PKHYL_RS08845;product=3-oxoadipyl-CoA thiolase;protein_id=WP_240364953.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1653819	1655405	.	-	.	ID=gene-PKHYL_RS08850;Name=PKHYL_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08850;old_locus_tag=PKHYL_21380
NZ_AP019516.1	Protein Homology	CDS	1653819	1655405	.	-	0	ID=cds-WP_240364954.1;Parent=gene-PKHYL_RS08850;Dbxref=Genbank:WP_240364954.1;Name=WP_240364954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280443.1;locus_tag=PKHYL_RS08850;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_240364954.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1655475	1656251	.	-	.	ID=gene-PKHYL_RS08855;Name=PKHYL_RS08855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08855;old_locus_tag=PKHYL_21400;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1655475	1656251	.	-	0	ID=cds-PKHYL_RS08855;Parent=gene-PKHYL_RS08855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199723.1;locus_tag=PKHYL_RS08855;product=enoyl-CoA hydratase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1656635	1657788	.	+	.	ID=gene-PKHYL_RS08860;Name=PKHYL_RS08860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08860;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1656635	1657788	.	+	0	ID=cds-PKHYL_RS08860;Parent=gene-PKHYL_RS08860;Note=frameshifted;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443430.1;locus_tag=PKHYL_RS08860;product=acyl-CoA dehydrogenase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1657920	1659173	.	+	.	ID=gene-PKHYL_RS08865;Name=PKHYL_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08865;old_locus_tag=PKHYL_21430
NZ_AP019516.1	Protein Homology	CDS	1657920	1659173	.	+	0	ID=cds-WP_227673263.1;Parent=gene-PKHYL_RS08865;Dbxref=Genbank:WP_227673263.1;Name=WP_227673263.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443429.1;locus_tag=PKHYL_RS08865;product=MFS transporter;protein_id=WP_227673263.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1659454	1660299	.	+	.	ID=gene-PKHYL_RS08870;Name=PKHYL_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08870;old_locus_tag=PKHYL_21440
NZ_AP019516.1	Protein Homology	CDS	1659454	1660299	.	+	0	ID=cds-WP_240364955.1;Parent=gene-PKHYL_RS08870;Dbxref=Genbank:WP_240364955.1;Name=WP_240364955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280447.1;locus_tag=PKHYL_RS08870;product=IclR family transcriptional regulator;protein_id=WP_240364955.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1660431	1661531	.	+	.	ID=gene-PKHYL_RS08875;Name=PKHYL_RS08875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08875;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1660431	1661531	.	+	0	ID=cds-PKHYL_RS08875;Parent=gene-PKHYL_RS08875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005252724.1;locus_tag=PKHYL_RS08875;product=NADH:flavin oxidoreductase/NADH oxidase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1661917	1662225	.	+	.	ID=gene-PKHYL_RS08880;Name=PKHYL_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08880;old_locus_tag=PKHYL_21480
NZ_AP019516.1	Protein Homology	CDS	1661917	1662225	.	+	0	ID=cds-WP_240364956.1;Parent=gene-PKHYL_RS08880;Dbxref=Genbank:WP_240364956.1;Name=WP_240364956.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.2;locus_tag=PKHYL_RS08880;product=transposase;protein_id=WP_240364956.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1662602	1663249	.	-	.	ID=gene-PKHYL_RS08885;Name=PKHYL_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08885;old_locus_tag=PKHYL_21500
NZ_AP019516.1	Protein Homology	CDS	1662602	1663249	.	-	0	ID=cds-WP_083328808.1;Parent=gene-PKHYL_RS08885;Dbxref=Genbank:WP_083328808.1;Name=WP_083328808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280122.1;locus_tag=PKHYL_RS08885;product=glutathione S-transferase;protein_id=WP_083328808.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1663450	1663998	.	+	.	ID=gene-PKHYL_RS17525;Name=PKHYL_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17525;old_locus_tag=PKHYL_21510
NZ_AP019516.1	Protein Homology	CDS	1663450	1663998	.	+	0	ID=cds-WP_269778136.1;Parent=gene-PKHYL_RS17525;Dbxref=Genbank:WP_269778136.1;Name=WP_269778136.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023682.2;locus_tag=PKHYL_RS17525;product=thermostable hemolysin;protein_id=WP_269778136.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1664040	1664300	.	+	.	ID=gene-PKHYL_RS17530;Name=PKHYL_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17530;old_locus_tag=PKHYL_21520
NZ_AP019516.1	Protein Homology	CDS	1664040	1664300	.	+	0	ID=cds-WP_269778137.1;Parent=gene-PKHYL_RS17530;Dbxref=Genbank:WP_269778137.1;Name=WP_269778137.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023682.2;locus_tag=PKHYL_RS17530;product=thermostable hemolysin;protein_id=WP_269778137.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1664357	1665379	.	+	.	ID=gene-PKHYL_RS17535;Name=PKHYL_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17535;old_locus_tag=PKHYL_21530
NZ_AP019516.1	Protein Homology	CDS	1664357	1665379	.	+	0	ID=cds-WP_269778138.1;Parent=gene-PKHYL_RS17535;Dbxref=Genbank:WP_269778138.1;Name=WP_269778138.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.2;locus_tag=PKHYL_RS17535;product=class I adenylate-forming enzyme family protein;protein_id=WP_269778138.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1665366	1665983	.	+	.	ID=gene-PKHYL_RS17540;Name=PKHYL_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17540;old_locus_tag=PKHYL_21540
NZ_AP019516.1	Protein Homology	CDS	1665366	1665983	.	+	0	ID=cds-WP_269778139.1;Parent=gene-PKHYL_RS17540;Dbxref=Genbank:WP_269778139.1;Name=WP_269778139.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.2;locus_tag=PKHYL_RS17540;product=AMP-binding protein;protein_id=WP_269778139.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1666317	1667006	.	+	.	ID=gene-PKHYL_RS08900;Name=PKHYL_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08900;old_locus_tag=PKHYL_21550
NZ_AP019516.1	Protein Homology	CDS	1666317	1667006	.	+	0	ID=cds-WP_240364957.1;Parent=gene-PKHYL_RS08900;Dbxref=Genbank:WP_240364957.1;Name=WP_240364957.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF014698.2;locus_tag=PKHYL_RS08900;product=TauD/TfdA family dioxygenase;protein_id=WP_240364957.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1667084	1667356	.	+	.	ID=gene-PKHYL_RS17545;Name=PKHYL_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17545;old_locus_tag=PKHYL_21560
NZ_AP019516.1	Protein Homology	CDS	1667084	1667356	.	+	0	ID=cds-WP_269778140.1;Parent=gene-PKHYL_RS17545;Dbxref=Genbank:WP_269778140.1;Name=WP_269778140.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012334.2;locus_tag=PKHYL_RS17545;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_269778140.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1667353	1667934	.	+	.	ID=gene-PKHYL_RS08905;Name=PKHYL_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08905;old_locus_tag=PKHYL_21570
NZ_AP019516.1	Protein Homology	CDS	1667353	1667934	.	+	0	ID=cds-WP_269778141.1;Parent=gene-PKHYL_RS08905;Dbxref=Genbank:WP_269778141.1;Name=WP_269778141.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF006565.0;locus_tag=PKHYL_RS08905;product=SDR family oxidoreductase;protein_id=WP_269778141.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1667973	1668671	.	-	.	ID=gene-PKHYL_RS08910;Name=PKHYL_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08910;old_locus_tag=PKHYL_21580
NZ_AP019516.1	Protein Homology	CDS	1667973	1668671	.	-	0	ID=cds-WP_071001507.1;Parent=gene-PKHYL_RS08910;Dbxref=Genbank:WP_071001507.1;Name=WP_071001507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393376.1;locus_tag=PKHYL_RS08910;product=VIT family protein;protein_id=WP_071001507.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1668750	1669283	.	-	.	ID=gene-PKHYL_RS08915;Name=PKHYL_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08915;old_locus_tag=PKHYL_21590
NZ_AP019516.1	Protein Homology	CDS	1668750	1669283	.	-	0	ID=cds-WP_240364958.1;Parent=gene-PKHYL_RS08915;Dbxref=Genbank:WP_240364958.1;Name=WP_240364958.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=PKHYL_RS08915;product=ATP-binding protein;protein_id=WP_240364958.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1669297	1669791	.	-	.	ID=gene-PKHYL_RS08920;Name=PKHYL_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08920;old_locus_tag=PKHYL_21600
NZ_AP019516.1	Protein Homology	CDS	1669297	1669791	.	-	0	ID=cds-WP_240364959.1;Parent=gene-PKHYL_RS08920;Dbxref=Genbank:WP_240364959.1;Name=WP_240364959.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012722.2;locus_tag=PKHYL_RS08920;product=hypothetical protein;protein_id=WP_240364959.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1669846	1670235	.	-	.	ID=gene-PKHYL_RS08925;Name=PKHYL_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08925;old_locus_tag=PKHYL_21610
NZ_AP019516.1	GeneMarkS-2+	CDS	1669846	1670235	.	-	0	ID=cds-WP_240364960.1;Parent=gene-PKHYL_RS08925;Dbxref=Genbank:WP_240364960.1;Name=WP_240364960.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08925;product=hypothetical protein;protein_id=WP_240364960.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1670296	1670968	.	-	.	ID=gene-PKHYL_RS08930;Name=PKHYL_RS08930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08930;old_locus_tag=PKHYL_21620;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1670296	1670968	.	-	0	ID=cds-PKHYL_RS08930;Parent=gene-PKHYL_RS08930;Note=frameshifted;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444568.1;locus_tag=PKHYL_RS08930;product=response regulator;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1671007	1671567	.	-	.	ID=gene-PKHYL_RS08935;Name=PKHYL_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08935;old_locus_tag=PKHYL_21640
NZ_AP019516.1	Protein Homology	CDS	1671007	1671567	.	-	0	ID=cds-WP_071003598.1;Parent=gene-PKHYL_RS08935;Dbxref=Genbank:WP_071003598.1;Name=WP_071003598.1;Ontology_term=GO:0009055,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281329.1;locus_tag=PKHYL_RS08935;product=cytochrome b/b6 domain-containing protein;protein_id=WP_071003598.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1672288	1672482	.	+	.	ID=gene-PKHYL_RS08940;Name=PKHYL_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08940
NZ_AP019516.1	GeneMarkS-2+	CDS	1672288	1672482	.	+	0	ID=cds-WP_240364961.1;Parent=gene-PKHYL_RS08940;Dbxref=Genbank:WP_240364961.1;Name=WP_240364961.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08940;product=hypothetical protein;protein_id=WP_240364961.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1672516	1672992	.	+	.	ID=gene-PKHYL_RS08945;Name=PKHYL_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08945;old_locus_tag=PKHYL_21650
NZ_AP019516.1	Protein Homology	CDS	1672516	1672992	.	+	0	ID=cds-WP_240364962.1;Parent=gene-PKHYL_RS08945;Dbxref=Genbank:WP_240364962.1;Name=WP_240364962.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019335.2;locus_tag=PKHYL_RS08945;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_240364962.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1673046	1674386	.	+	.	ID=gene-PKHYL_RS08950;Name=PKHYL_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08950;old_locus_tag=PKHYL_21660
NZ_AP019516.1	Protein Homology	CDS	1673046	1674386	.	+	0	ID=cds-WP_240364963.1;Parent=gene-PKHYL_RS08950;Dbxref=Genbank:WP_240364963.1;Name=WP_240364963.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: protein motif:HMM:TIGR01783.1;locus_tag=PKHYL_RS08950;product=TonB-dependent siderophore receptor;protein_id=WP_240364963.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1674598	1676145	.	+	.	ID=gene-PKHYL_RS08955;Name=PKHYL_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08955;old_locus_tag=PKHYL_21670
NZ_AP019516.1	Protein Homology	CDS	1674598	1676145	.	+	0	ID=cds-WP_240364964.1;Parent=gene-PKHYL_RS08955;Dbxref=Genbank:WP_240364964.1;Name=WP_240364964.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960728.1;locus_tag=PKHYL_RS08955;product=ATP-binding cassette domain-containing protein;protein_id=WP_240364964.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1676126	1676392	.	+	.	ID=gene-PKHYL_RS08960;Name=PKHYL_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08960;old_locus_tag=PKHYL_21680
NZ_AP019516.1	GeneMarkS-2+	CDS	1676126	1676392	.	+	0	ID=cds-WP_240364965.1;Parent=gene-PKHYL_RS08960;Dbxref=Genbank:WP_240364965.1;Name=WP_240364965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS08960;product=hypothetical protein;protein_id=WP_240364965.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1676517	1678760	.	+	.	ID=gene-PKHYL_RS08965;Name=PKHYL_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08965;old_locus_tag=PKHYL_21690
NZ_AP019516.1	Protein Homology	CDS	1676517	1678760	.	+	0	ID=cds-WP_240364966.1;Parent=gene-PKHYL_RS08965;Dbxref=Genbank:WP_240364966.1;Name=WP_240364966.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: protein motif:HMM:TIGR01783.1;locus_tag=PKHYL_RS08965;product=TonB-dependent siderophore receptor;protein_id=WP_240364966.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1678959	1679705	.	+	.	ID=gene-PKHYL_RS08970;Name=PKHYL_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS08970;old_locus_tag=PKHYL_21700
NZ_AP019516.1	Protein Homology	CDS	1678959	1679705	.	+	0	ID=cds-WP_071001503.1;Parent=gene-PKHYL_RS08970;Dbxref=Genbank:WP_071001503.1;Name=WP_071001503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442962.1;locus_tag=PKHYL_RS08970;product=siderophore-interacting protein;protein_id=WP_071001503.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1679781	1681187	.	-	.	ID=gene-PKHYL_RS08975;Name=PKHYL_RS08975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08975;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1679781	1681187	.	-	0	ID=cds-PKHYL_RS08975;Parent=gene-PKHYL_RS08975;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197522.1;locus_tag=PKHYL_RS08975;product=Na+/H+ antiporter NhaC;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1681290	1681632	.	-	.	ID=gene-PKHYL_RS08980;Name=PKHYL_RS08980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08980;old_locus_tag=PKHYL_21740;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1681290	1681632	.	-	0	ID=cds-PKHYL_RS08980;Parent=gene-PKHYL_RS08980;Note=frameshifted;Ontology_term=GO:0006729,GO:0008124;gbkey=CDS;go_function=4-alpha-hydroxytetrahydrobiopterin dehydratase activity|0008124||IEA;go_process=tetrahydrobiopterin biosynthetic process|0006729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443697.1;locus_tag=PKHYL_RS08980;product=4a-hydroxytetrahydrobiopterin dehydratase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1681748	1682689	.	-	.	ID=gene-PKHYL_RS08985;Name=phhA;gbkey=Gene;gene=phhA;gene_biotype=protein_coding;locus_tag=PKHYL_RS08985;old_locus_tag=PKHYL_21750
NZ_AP019516.1	Protein Homology	CDS	1681748	1682689	.	-	0	ID=cds-WP_083328803.1;Parent=gene-PKHYL_RS08985;Dbxref=Genbank:WP_083328803.1;Name=WP_083328803.1;Ontology_term=GO:0006559,GO:0004505;gbkey=CDS;gene=phhA;go_function=phenylalanine 4-monooxygenase activity|0004505||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197505.1;locus_tag=PKHYL_RS08985;product=phenylalanine 4-monooxygenase;protein_id=WP_083328803.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1682830	1683944	.	-	.	ID=gene-PKHYL_RS08990;Name=hppD;gbkey=Gene;gene=hppD;gene_biotype=pseudogene;locus_tag=PKHYL_RS08990;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1682830	1683944	.	-	0	ID=cds-PKHYL_RS08990;Parent=gene-PKHYL_RS08990;Note=frameshifted;Ontology_term=GO:0006559,GO:0006572,GO:0003868;gbkey=CDS;gene=hppD;go_function=4-hydroxyphenylpyruvate dioxygenase activity|0003868||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197502.1;locus_tag=PKHYL_RS08990;product=4-hydroxyphenylpyruvate dioxygenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1684107	1685053	.	+	.	ID=gene-PKHYL_RS08995;Name=PKHYL_RS08995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS08995;old_locus_tag=PKHYL_21790;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1684107	1685053	.	+	0	ID=cds-PKHYL_RS08995;Parent=gene-PKHYL_RS08995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=PKHYL_RS08995;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1685211	1686406	.	+	.	ID=gene-PKHYL_RS09000;Name=PKHYL_RS09000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09000;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1685211	1686406	.	+	0	ID=cds-PKHYL_RS09000;Parent=gene-PKHYL_RS09000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513886.1;locus_tag=PKHYL_RS09000;product=aspartate/tyrosine/aromatic aminotransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1686606	1687896	.	+	.	ID=gene-PKHYL_RS09005;Name=fahA;gbkey=Gene;gene=fahA;gene_biotype=pseudogene;locus_tag=PKHYL_RS09005;old_locus_tag=PKHYL_21830;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1686606	1687896	.	+	0	ID=cds-PKHYL_RS09005;Parent=gene-PKHYL_RS09005;Note=frameshifted;Ontology_term=GO:0006559,GO:0006572,GO:0004334;gbkey=CDS;gene=fahA;go_function=fumarylacetoacetase activity|0004334||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443702.1;locus_tag=PKHYL_RS09005;product=fumarylacetoacetase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1687993	1688568	.	+	.	ID=gene-PKHYL_RS09010;Name=PKHYL_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09010;old_locus_tag=PKHYL_21840
NZ_AP019516.1	Protein Homology	CDS	1687993	1688568	.	+	0	ID=cds-WP_071001498.1;Parent=gene-PKHYL_RS09010;Dbxref=Genbank:WP_071001498.1;Name=WP_071001498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513888.1;locus_tag=PKHYL_RS09010;product=VOC family protein;protein_id=WP_071001498.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1688813	1689148	.	+	.	ID=gene-PKHYL_RS09015;Name=PKHYL_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09015;old_locus_tag=PKHYL_21850
NZ_AP019516.1	Protein Homology	CDS	1688813	1689148	.	+	0	ID=cds-WP_240364967.1;Parent=gene-PKHYL_RS09015;Dbxref=Genbank:WP_240364967.1;Name=WP_240364967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015445.2;locus_tag=PKHYL_RS09015;product=hypothetical protein;protein_id=WP_240364967.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1689157	1690014	.	-	.	ID=gene-PKHYL_RS09020;Name=PKHYL_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09020;old_locus_tag=PKHYL_21860
NZ_AP019516.1	Protein Homology	CDS	1689157	1690014	.	-	0	ID=cds-WP_071001496.1;Parent=gene-PKHYL_RS09020;Dbxref=Genbank:WP_071001496.1;Name=WP_071001496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197487.1;locus_tag=PKHYL_RS09020;product=IclR family transcriptional regulator;protein_id=WP_071001496.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1690154	1690801	.	+	.	ID=gene-PKHYL_RS09025;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=PKHYL_RS09025;old_locus_tag=PKHYL_21870
NZ_AP019516.1	Protein Homology	CDS	1690154	1690801	.	+	0	ID=cds-WP_197496765.1;Parent=gene-PKHYL_RS09025;Dbxref=Genbank:WP_197496765.1;Name=WP_197496765.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034;gbkey=CDS;gene=maiA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395320.1;locus_tag=PKHYL_RS09025;product=maleylacetoacetate isomerase;protein_id=WP_197496765.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1690937	1691176	.	-	.	ID=gene-PKHYL_RS09030;Name=PKHYL_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09030
NZ_AP019516.1	GeneMarkS-2+	CDS	1690937	1691176	.	-	0	ID=cds-WP_156770947.1;Parent=gene-PKHYL_RS09030;Dbxref=Genbank:WP_156770947.1;Name=WP_156770947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09030;product=hypothetical protein;protein_id=WP_156770947.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1691106	1691315	.	-	.	ID=gene-PKHYL_RS09035;Name=PKHYL_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09035;old_locus_tag=PKHYL_21880
NZ_AP019516.1	Protein Homology	CDS	1691106	1691315	.	-	0	ID=cds-WP_071001494.1;Parent=gene-PKHYL_RS09035;Dbxref=Genbank:WP_071001494.1;Name=WP_071001494.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017476.2;locus_tag=PKHYL_RS09035;product=hypothetical protein;protein_id=WP_071001494.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1691360	1691563	.	-	.	ID=gene-PKHYL_RS09040;Name=PKHYL_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09040;old_locus_tag=PKHYL_21890
NZ_AP019516.1	Protein Homology	CDS	1691360	1691563	.	-	0	ID=cds-WP_071001493.1;Parent=gene-PKHYL_RS09040;Dbxref=Genbank:WP_071001493.1;Name=WP_071001493.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024418.2;locus_tag=PKHYL_RS09040;product=ESPR domain-containing protein;protein_id=WP_071001493.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1691808	1693241	.	-	.	ID=gene-PKHYL_RS09045;Name=PKHYL_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09045;old_locus_tag=PKHYL_21900
NZ_AP019516.1	Protein Homology	CDS	1691808	1693241	.	-	0	ID=cds-WP_240364968.1;Parent=gene-PKHYL_RS09045;Dbxref=Genbank:WP_240364968.1;Name=WP_240364968.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=PKHYL_RS09045;product=ATP-binding protein;protein_id=WP_240364968.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1693440	1693802	.	-	.	ID=gene-PKHYL_RS09050;Name=PKHYL_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09050;old_locus_tag=PKHYL_21910
NZ_AP019516.1	Protein Homology	CDS	1693440	1693802	.	-	0	ID=cds-WP_240364969.1;Parent=gene-PKHYL_RS09050;Dbxref=Genbank:WP_240364969.1;Name=WP_240364969.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012698.2;locus_tag=PKHYL_RS09050;product=response regulator transcription factor;protein_id=WP_240364969.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1693825	1694088	.	-	.	ID=gene-PKHYL_RS09055;Name=PKHYL_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09055;old_locus_tag=PKHYL_21920
NZ_AP019516.1	Protein Homology	CDS	1693825	1694088	.	-	0	ID=cds-WP_240364970.1;Parent=gene-PKHYL_RS09055;Dbxref=Genbank:WP_240364970.1;Name=WP_240364970.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=PKHYL_RS09055;product=response regulator;protein_id=WP_240364970.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1694364	1694879	.	+	.	ID=gene-PKHYL_RS09060;Name=PKHYL_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09060;old_locus_tag=PKHYL_21930
NZ_AP019516.1	Protein Homology	CDS	1694364	1694879	.	+	0	ID=cds-WP_240364971.1;Parent=gene-PKHYL_RS09060;Dbxref=Genbank:WP_240364971.1;Name=WP_240364971.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198475.1;locus_tag=PKHYL_RS09060;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_240364971.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1694991	1696574	.	-	.	ID=gene-PKHYL_RS09065;Name=PKHYL_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09065;old_locus_tag=PKHYL_21940
NZ_AP019516.1	GeneMarkS-2+	CDS	1694991	1696574	.	-	0	ID=cds-WP_240364972.1;Parent=gene-PKHYL_RS09065;Dbxref=Genbank:WP_240364972.1;Name=WP_240364972.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09065;product=hypothetical protein;protein_id=WP_240364972.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1696630	1696809	.	-	.	ID=gene-PKHYL_RS09070;Name=PKHYL_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09070;old_locus_tag=PKHYL_21950
NZ_AP019516.1	GeneMarkS-2+	CDS	1696630	1696809	.	-	0	ID=cds-WP_240364973.1;Parent=gene-PKHYL_RS09070;Dbxref=Genbank:WP_240364973.1;Name=WP_240364973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09070;product=hypothetical protein;protein_id=WP_240364973.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1696728	1698746	.	-	.	ID=gene-PKHYL_RS09075;Name=PKHYL_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09075;old_locus_tag=PKHYL_21960
NZ_AP019516.1	GeneMarkS-2+	CDS	1696728	1698746	.	-	0	ID=cds-WP_240364974.1;Parent=gene-PKHYL_RS09075;Dbxref=Genbank:WP_240364974.1;Name=WP_240364974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09075;product=hypothetical protein;protein_id=WP_240364974.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1699165	1699338	.	-	.	ID=gene-PKHYL_RS09080;Name=PKHYL_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09080
NZ_AP019516.1	GeneMarkS-2+	CDS	1699165	1699338	.	-	0	ID=cds-WP_240364975.1;Parent=gene-PKHYL_RS09080;Dbxref=Genbank:WP_240364975.1;Name=WP_240364975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09080;product=hypothetical protein;protein_id=WP_240364975.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1699399	1700994	.	+	.	ID=gene-PKHYL_RS09085;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=PKHYL_RS09085;old_locus_tag=PKHYL_21970
NZ_AP019516.1	Protein Homology	CDS	1699399	1700994	.	+	0	ID=cds-WP_240364976.1;Parent=gene-PKHYL_RS09085;Dbxref=Genbank:WP_240364976.1;Name=WP_240364976.1;Ontology_term=GO:0006750;gbkey=CDS;gene=ggt;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: protein motif:HMM:TIGR00066.1;locus_tag=PKHYL_RS09085;product=gamma-glutamyltransferase;protein_id=WP_240364976.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1701291	1705006	.	+	.	ID=gene-PKHYL_RS09090;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=pseudogene;locus_tag=PKHYL_RS09090;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1701291	1705006	.	+	0	ID=cds-PKHYL_RS09090;Parent=gene-PKHYL_RS09090;Note=frameshifted;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393434.1;locus_tag=PKHYL_RS09090;product=DNA polymerase III subunit alpha;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1705078	1705458	.	+	.	ID=gene-PKHYL_RS09095;Name=PKHYL_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09095;old_locus_tag=PKHYL_22030
NZ_AP019516.1	Protein Homology	CDS	1705078	1705458	.	+	0	ID=cds-WP_071001485.1;Parent=gene-PKHYL_RS09095;Dbxref=Genbank:WP_071001485.1;Name=WP_071001485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198455.1;locus_tag=PKHYL_RS09095;product=Hpt domain-containing protein;protein_id=WP_071001485.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1705458	1706335	.	+	.	ID=gene-PKHYL_RS09100;Name=PKHYL_RS09100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09100;old_locus_tag=PKHYL_22040;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1705458	1706335	.	+	0	ID=cds-PKHYL_RS09100;Parent=gene-PKHYL_RS09100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198454.1;locus_tag=PKHYL_RS09100;product=RNA methyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1706524	1707435	.	+	.	ID=gene-PKHYL_RS09105;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=PKHYL_RS09105;old_locus_tag=PKHYL_22050
NZ_AP019516.1	Protein Homology	CDS	1706524	1707435	.	+	0	ID=cds-WP_093069160.1;Parent=gene-PKHYL_RS09105;Dbxref=Genbank:WP_093069160.1;Name=WP_093069160.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198453.1;locus_tag=PKHYL_RS09105;product=serine O-acetyltransferase;protein_id=WP_093069160.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1707813	1708190	.	-	.	ID=gene-PKHYL_RS09110;Name=PKHYL_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09110;old_locus_tag=PKHYL_22060
NZ_AP019516.1	GeneMarkS-2+	CDS	1707813	1708190	.	-	0	ID=cds-WP_240364977.1;Parent=gene-PKHYL_RS09110;Dbxref=Genbank:WP_240364977.1;Name=WP_240364977.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09110;product=hypothetical protein;protein_id=WP_240364977.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1708187	1708567	.	-	.	ID=gene-PKHYL_RS09115;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=PKHYL_RS09115;old_locus_tag=PKHYL_22070
NZ_AP019516.1	Protein Homology	CDS	1708187	1708567	.	-	0	ID=cds-WP_240364978.1;Parent=gene-PKHYL_RS09115;Dbxref=Genbank:WP_240364978.1;Name=WP_240364978.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: protein motif:HMM:NF014233.2;locus_tag=PKHYL_RS09115;product=dihydroneopterin aldolase;protein_id=WP_240364978.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1708625	1709576	.	-	.	ID=gene-PKHYL_RS09120;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=pseudogene;locus_tag=PKHYL_RS09120;old_locus_tag=PKHYL_22080;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1708625	1709576	.	-	0	ID=cds-PKHYL_RS09120;Parent=gene-PKHYL_RS09120;Note=frameshifted;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201975.1;locus_tag=PKHYL_RS09120;product=EamA family transporter RarD;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1709802	1712088	.	-	.	ID=gene-PKHYL_RS09125;Name=PKHYL_RS09125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09125;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1709802	1712088	.	-	0	ID=cds-PKHYL_RS09125;Parent=gene-PKHYL_RS09125;Note=frameshifted;Ontology_term=GO:0009073,GO:0008977;gbkey=CDS;go_function=prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201977.1;locus_tag=PKHYL_RS09125;product=bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1712309	1713449	.	-	.	ID=gene-PKHYL_RS09130;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=pseudogene;locus_tag=PKHYL_RS09130;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1712309	1713449	.	-	0	ID=cds-PKHYL_RS09130;Parent=gene-PKHYL_RS09130;Note=frameshifted;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280458.1;locus_tag=PKHYL_RS09130;product=histidinol-phosphate transaminase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1713545	1714717	.	-	.	ID=gene-PKHYL_RS09135;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=PKHYL_RS09135;old_locus_tag=PKHYL_22140
NZ_AP019516.1	Protein Homology	CDS	1713545	1714717	.	-	0	ID=cds-WP_186474609.1;Parent=gene-PKHYL_RS09135;Dbxref=Genbank:WP_186474609.1;Name=WP_186474609.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280459.1;locus_tag=PKHYL_RS09135;product=prephenate dehydratase;protein_id=WP_186474609.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1715497	1715862	.	+	.	ID=gene-PKHYL_RS17550;Name=PKHYL_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17550;old_locus_tag=PKHYL_22150
NZ_AP019516.1	Protein Homology	CDS	1715497	1715862	.	+	0	ID=cds-WP_269778142.1;Parent=gene-PKHYL_RS17550;Dbxref=Genbank:WP_269778142.1;Name=WP_269778142.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013116.2;locus_tag=PKHYL_RS17550;product=hypothetical protein;protein_id=WP_269778142.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1715868	1716438	.	+	.	ID=gene-PKHYL_RS17555;Name=PKHYL_RS17555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17555;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1715868	1716438	.	+	0	ID=cds-PKHYL_RS17555;Parent=gene-PKHYL_RS17555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013116.2;locus_tag=PKHYL_RS17555;product=hypothetical protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1716541	1716762	.	+	.	ID=gene-PKHYL_RS09145;Name=PKHYL_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09145;old_locus_tag=PKHYL_22170
NZ_AP019516.1	GeneMarkS-2+	CDS	1716541	1716762	.	+	0	ID=cds-WP_240364979.1;Parent=gene-PKHYL_RS09145;Dbxref=Genbank:WP_240364979.1;Name=WP_240364979.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09145;product=hypothetical protein;protein_id=WP_240364979.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1716759	1716992	.	+	.	ID=gene-PKHYL_RS09150;Name=PKHYL_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09150;old_locus_tag=PKHYL_22180
NZ_AP019516.1	GeneMarkS-2+	CDS	1716759	1716992	.	+	0	ID=cds-WP_240364980.1;Parent=gene-PKHYL_RS09150;Dbxref=Genbank:WP_240364980.1;Name=WP_240364980.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09150;product=hypothetical protein;protein_id=WP_240364980.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1717078	1717593	.	-	.	ID=gene-PKHYL_RS09155;Name=PKHYL_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09155;old_locus_tag=PKHYL_22190
NZ_AP019516.1	Protein Homology	CDS	1717078	1717593	.	-	0	ID=cds-WP_071003591.1;Parent=gene-PKHYL_RS09155;Dbxref=Genbank:WP_071003591.1;Name=WP_071003591.1;Ontology_term=GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443401.1;locus_tag=PKHYL_RS09155;product=adenine phosphoribosyltransferase;protein_id=WP_071003591.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1717994	1718158	.	+	.	ID=gene-PKHYL_RS09160;Name=PKHYL_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09160;old_locus_tag=PKHYL_22200
NZ_AP019516.1	Protein Homology	CDS	1717994	1718158	.	+	0	ID=cds-WP_057759803.1;Parent=gene-PKHYL_RS09160;Dbxref=Genbank:WP_057759803.1;Name=WP_057759803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004990351.1;locus_tag=PKHYL_RS09160;product=rubredoxin;protein_id=WP_057759803.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1718186	1719234	.	+	.	ID=gene-PKHYL_RS09165;Name=PKHYL_RS09165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09165;old_locus_tag=PKHYL_22220;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1718186	1719234	.	+	0	ID=cds-PKHYL_RS09165;Parent=gene-PKHYL_RS09165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280464.1;locus_tag=PKHYL_RS09165;product=alpha/beta hydrolase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1719249	1719836	.	-	.	ID=gene-PKHYL_RS09170;Name=PKHYL_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09170;old_locus_tag=PKHYL_22230
NZ_AP019516.1	GeneMarkS-2+	CDS	1719249	1719836	.	-	0	ID=cds-WP_240364981.1;Parent=gene-PKHYL_RS09170;Dbxref=Genbank:WP_240364981.1;Name=WP_240364981.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09170;product=WG repeat-containing protein;protein_id=WP_240364981.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1719787	1720050	.	-	.	ID=gene-PKHYL_RS09175;Name=PKHYL_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09175;old_locus_tag=PKHYL_22240
NZ_AP019516.1	Protein Homology	CDS	1719787	1720050	.	-	0	ID=cds-WP_240364982.1;Parent=gene-PKHYL_RS09175;Dbxref=Genbank:WP_240364982.1;Name=WP_240364982.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026253.2;locus_tag=PKHYL_RS09175;product=WG repeat-containing protein;protein_id=WP_240364982.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1720797	1721662	.	+	.	ID=gene-PKHYL_RS09180;Name=PKHYL_RS09180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09180;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1720797	1721662	.	+	0	ID=cds-PKHYL_RS09180;Parent=gene-PKHYL_RS09180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280466.1;locus_tag=PKHYL_RS09180;product=DMT family transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1721807	1723131	.	-	.	ID=gene-PKHYL_RS09185;Name=PKHYL_RS09185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09185;old_locus_tag=PKHYL_22270;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1721807	1723131	.	-	0	ID=cds-PKHYL_RS09185;Parent=gene-PKHYL_RS09185;Note=frameshifted;Ontology_term=GO:0015851,GO:0015205,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959846.1;locus_tag=PKHYL_RS09185;product=NCS2 family nucleobase:cation symporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1723775	1725211	.	+	.	ID=gene-PKHYL_RS09190;Name=PKHYL_RS09190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09190;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1723775	1725211	.	+	0	ID=cds-PKHYL_RS09190;Parent=gene-PKHYL_RS09190;Note=frameshifted;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016804803.1;locus_tag=PKHYL_RS09190;product=L-serine ammonia-lyase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1725330	1725728	.	-	.	ID=gene-PKHYL_RS09195;Name=PKHYL_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09195;old_locus_tag=PKHYL_22340
NZ_AP019516.1	Protein Homology	CDS	1725330	1725728	.	-	0	ID=cds-WP_058024290.1;Parent=gene-PKHYL_RS09195;Dbxref=Genbank:WP_058024290.1;Name=WP_058024290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443396.1;locus_tag=PKHYL_RS09195;product=DUF4377 domain-containing protein;protein_id=WP_058024290.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1726126	1727349	.	-	.	ID=gene-PKHYL_RS09200;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=PKHYL_RS09200;old_locus_tag=PKHYL_22350
NZ_AP019516.1	Protein Homology	CDS	1726126	1727349	.	-	0	ID=cds-WP_240364983.1;Parent=gene-PKHYL_RS09200;Dbxref=Genbank:WP_240364983.1;Name=WP_240364983.1;Ontology_term=GO:0006526,GO:0004358;gbkey=CDS;gene=argJ;go_function=glutamate N-acetyltransferase activity|0004358||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017387487.1;locus_tag=PKHYL_RS09200;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=WP_240364983.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1727523	1728346	.	-	.	ID=gene-PKHYL_RS09205;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=pseudogene;locus_tag=PKHYL_RS09205;old_locus_tag=PKHYL_22360;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1727523	1728346	.	-	0	ID=cds-PKHYL_RS09205;Parent=gene-PKHYL_RS09205;Note=frameshifted;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008853;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010202011.1;locus_tag=PKHYL_RS09205;product=exodeoxyribonuclease III;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1728577	1728756	.	+	.	ID=gene-PKHYL_RS09210;Name=PKHYL_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09210;old_locus_tag=PKHYL_22380
NZ_AP019516.1	GeneMarkS-2+	CDS	1728577	1728756	.	+	0	ID=cds-WP_240364984.1;Parent=gene-PKHYL_RS09210;Dbxref=Genbank:WP_240364984.1;Name=WP_240364984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09210;product=hypothetical protein;protein_id=WP_240364984.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1728767	1729162	.	+	.	ID=gene-PKHYL_RS09215;Name=PKHYL_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09215;old_locus_tag=PKHYL_22390
NZ_AP019516.1	GeneMarkS-2+	CDS	1728767	1729162	.	+	0	ID=cds-WP_240364985.1;Parent=gene-PKHYL_RS09215;Dbxref=Genbank:WP_240364985.1;Name=WP_240364985.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09215;product=hypothetical protein;protein_id=WP_240364985.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1729368	1730003	.	+	.	ID=gene-PKHYL_RS09220;Name=PKHYL_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09220;old_locus_tag=PKHYL_22400
NZ_AP019516.1	Protein Homology	CDS	1729368	1730003	.	+	0	ID=cds-WP_240364986.1;Parent=gene-PKHYL_RS09220;Dbxref=Genbank:WP_240364986.1;Name=WP_240364986.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=PKHYL_RS09220;product=ATP-binding cassette domain-containing protein;protein_id=WP_240364986.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1730107	1730883	.	+	.	ID=gene-PKHYL_RS09225;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=PKHYL_RS09225;old_locus_tag=PKHYL_22410
NZ_AP019516.1	Protein Homology	CDS	1730107	1730883	.	+	0	ID=cds-WP_240364987.1;Parent=gene-PKHYL_RS09225;Dbxref=Genbank:WP_240364987.1;Name=WP_240364987.1;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010202015.1;locus_tag=PKHYL_RS09225;product=iron export ABC transporter permease subunit FetB;protein_id=WP_240364987.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1731452	1733149	.	+	.	ID=gene-PKHYL_RS09230;Name=PKHYL_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09230;old_locus_tag=PKHYL_22420
NZ_AP019516.1	Protein Homology	CDS	1731452	1733149	.	+	0	ID=cds-WP_240364988.1;Parent=gene-PKHYL_RS09230;Dbxref=Genbank:WP_240364988.1;Name=WP_240364988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443392.1;locus_tag=PKHYL_RS09230;product=AMP-binding protein;protein_id=WP_240364988.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1733710	1735400	.	+	.	ID=gene-PKHYL_RS09235;Name=PKHYL_RS09235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09235;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1733710	1735400	.	+	0	ID=cds-PKHYL_RS09235;Parent=gene-PKHYL_RS09235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443392.1;locus_tag=PKHYL_RS09235;product=AMP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1735494	1736363	.	-	.	ID=gene-PKHYL_RS09240;Name=PKHYL_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09240;old_locus_tag=PKHYL_22450
NZ_AP019516.1	Protein Homology	CDS	1735494	1736363	.	-	0	ID=cds-WP_186474628.1;Parent=gene-PKHYL_RS09240;Dbxref=Genbank:WP_186474628.1;Name=WP_186474628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280474.1;locus_tag=PKHYL_RS09240;product=SDR family oxidoreductase;protein_id=WP_186474628.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1736523	1737284	.	-	.	ID=gene-PKHYL_RS09245;Name=PKHYL_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09245;old_locus_tag=PKHYL_22460
NZ_AP019516.1	Protein Homology	CDS	1736523	1737284	.	-	0	ID=cds-WP_071001466.1;Parent=gene-PKHYL_RS09245;Dbxref=Genbank:WP_071001466.1;Name=WP_071001466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513521.1;locus_tag=PKHYL_RS09245;product=histidine phosphatase family protein;protein_id=WP_071001466.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1737327	1738569	.	-	.	ID=gene-PKHYL_RS09250;Name=PKHYL_RS09250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09250;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1737327	1738569	.	-	0	ID=cds-PKHYL_RS09250;Parent=gene-PKHYL_RS09250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010202022.1;locus_tag=PKHYL_RS09250;product=phosphotransferase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1738759	1740005	.	-	.	ID=gene-PKHYL_RS09255;Name=PKHYL_RS09255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09255;old_locus_tag=PKHYL_22490;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1738759	1740005	.	-	0	ID=cds-PKHYL_RS09255;Parent=gene-PKHYL_RS09255;Note=frameshifted;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513519.1;locus_tag=PKHYL_RS09255;product=acyl-CoA dehydrogenase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1740275	1741255	.	-	.	ID=gene-PKHYL_RS09260;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=pseudogene;locus_tag=PKHYL_RS09260;old_locus_tag=PKHYL_22500;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1740275	1741255	.	-	0	ID=cds-PKHYL_RS09260;Parent=gene-PKHYL_RS09260;Note=internal stop;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513518.1;locus_tag=PKHYL_RS09260;product=protease SohB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1741615	1743516	.	+	.	ID=gene-PKHYL_RS09265;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=PKHYL_RS09265;old_locus_tag=PKHYL_22520
NZ_AP019516.1	Protein Homology	CDS	1741615	1743516	.	+	0	ID=cds-WP_240364989.1;Parent=gene-PKHYL_RS09265;Dbxref=Genbank:WP_240364989.1;Name=WP_240364989.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010202028.1;locus_tag=PKHYL_RS09265;product=aspartate--tRNA ligase;protein_id=WP_240364989.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1743523	1744524	.	+	.	ID=gene-PKHYL_RS09270;Name=PKHYL_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09270;old_locus_tag=PKHYL_22530
NZ_AP019516.1	Protein Homology	CDS	1743523	1744524	.	+	0	ID=cds-WP_240364990.1;Parent=gene-PKHYL_RS09270;Dbxref=Genbank:WP_240364990.1;Name=WP_240364990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443384.1;locus_tag=PKHYL_RS09270;product=lysophospholipid acyltransferase family protein;protein_id=WP_240364990.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1744633	1745427	.	+	.	ID=gene-PKHYL_RS09275;Name=PKHYL_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09275;old_locus_tag=PKHYL_22540
NZ_AP019516.1	Protein Homology	CDS	1744633	1745427	.	+	0	ID=cds-WP_212563590.1;Parent=gene-PKHYL_RS09275;Dbxref=Genbank:WP_212563590.1;Name=WP_212563590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960259.1;locus_tag=PKHYL_RS09275;product=glycosyltransferase;protein_id=WP_212563590.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1745545	1746390	.	+	.	ID=gene-PKHYL_RS09280;Name=PKHYL_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09280;old_locus_tag=PKHYL_22550
NZ_AP019516.1	Protein Homology	CDS	1745545	1746390	.	+	0	ID=cds-WP_240364991.1;Parent=gene-PKHYL_RS09280;Dbxref=Genbank:WP_240364991.1;Name=WP_240364991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010202032.1;locus_tag=PKHYL_RS09280;product=hypothetical protein;protein_id=WP_240364991.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1746401	1746532	.	-	.	ID=gene-PKHYL_RS17560;Name=PKHYL_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17560
NZ_AP019516.1	GeneMarkS-2+	CDS	1746401	1746532	.	-	0	ID=cds-WP_269778143.1;Parent=gene-PKHYL_RS17560;Dbxref=Genbank:WP_269778143.1;Name=WP_269778143.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17560;product=hypothetical protein;protein_id=WP_269778143.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1746562	1747521	.	-	.	ID=gene-PKHYL_RS09285;Name=PKHYL_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09285;old_locus_tag=PKHYL_22560
NZ_AP019516.1	Protein Homology	CDS	1746562	1747521	.	-	0	ID=cds-WP_240364992.1;Parent=gene-PKHYL_RS09285;Dbxref=Genbank:WP_240364992.1;Name=WP_240364992.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024831.2;locus_tag=PKHYL_RS09285;product=glycosyltransferase;protein_id=WP_240364992.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1747811	1748809	.	+	.	ID=gene-PKHYL_RS09290;Name=PKHYL_RS09290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09290;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1747811	1748809	.	+	0	ID=cds-PKHYL_RS09290;Parent=gene-PKHYL_RS09290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010202039.1;locus_tag=PKHYL_RS09290;product=Stealth CR1 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1748903	1750068	.	+	.	ID=gene-PKHYL_RS09295;Name=PKHYL_RS09295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09295;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1748903	1750068	.	+	0	ID=cds-PKHYL_RS09295;Parent=gene-PKHYL_RS09295;Note=frameshifted;Ontology_term=GO:0000271,GO:0003979,GO:0016616,GO:0051287;gbkey=CDS;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002120815.1;locus_tag=PKHYL_RS09295;product=nucleotide sugar dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1750068	1751081	.	+	.	ID=gene-PKHYL_RS09300;Name=PKHYL_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09300;old_locus_tag=PKHYL_22600
NZ_AP019516.1	Protein Homology	CDS	1750068	1751081	.	+	0	ID=cds-WP_240364993.1;Parent=gene-PKHYL_RS09300;Dbxref=Genbank:WP_240364993.1;Name=WP_240364993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004652471.1;locus_tag=PKHYL_RS09300;product=NAD-dependent epimerase;protein_id=WP_240364993.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1751182	1751772	.	+	.	ID=gene-PKHYL_RS09305;Name=PKHYL_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09305;old_locus_tag=PKHYL_22610
NZ_AP019516.1	GeneMarkS-2+	CDS	1751182	1751772	.	+	0	ID=cds-WP_240364994.1;Parent=gene-PKHYL_RS09305;Dbxref=Genbank:WP_240364994.1;Name=WP_240364994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09305;product=hypothetical protein;protein_id=WP_240364994.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1752315	1752527	.	-	.	ID=gene-PKHYL_RS09310;Name=PKHYL_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09310;old_locus_tag=PKHYL_22640
NZ_AP019516.1	GeneMarkS-2+	CDS	1752315	1752527	.	-	0	ID=cds-WP_240364995.1;Parent=gene-PKHYL_RS09310;Dbxref=Genbank:WP_240364995.1;Name=WP_240364995.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09310;product=hypothetical protein;protein_id=WP_240364995.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1752650	1753033	.	-	.	ID=gene-PKHYL_RS09315;Name=PKHYL_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09315;old_locus_tag=PKHYL_22650
NZ_AP019516.1	GeneMarkS-2+	CDS	1752650	1753033	.	-	0	ID=cds-WP_240364996.1;Parent=gene-PKHYL_RS09315;Dbxref=Genbank:WP_240364996.1;Name=WP_240364996.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09315;product=hypothetical protein;protein_id=WP_240364996.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1753169	1753477	.	-	.	ID=gene-PKHYL_RS09320;Name=PKHYL_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09320;old_locus_tag=PKHYL_22660
NZ_AP019516.1	Protein Homology	CDS	1753169	1753477	.	-	0	ID=cds-WP_240364997.1;Parent=gene-PKHYL_RS09320;Dbxref=Genbank:WP_240364997.1;Name=WP_240364997.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=PKHYL_RS09320;product=glycosyltransferase;protein_id=WP_240364997.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1754314	1755177	.	-	.	ID=gene-PKHYL_RS09325;Name=PKHYL_RS09325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09325;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1754314	1755177	.	-	0	ID=cds-PKHYL_RS09325;Parent=gene-PKHYL_RS09325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010202048.1;locus_tag=PKHYL_RS09325;product=glycosyl transferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1755340	1756086	.	-	.	ID=gene-PKHYL_RS09330;Name=PKHYL_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09330;old_locus_tag=PKHYL_22730
NZ_AP019516.1	GeneMarkS-2+	CDS	1755340	1756086	.	-	0	ID=cds-WP_240364998.1;Parent=gene-PKHYL_RS09330;Dbxref=Genbank:WP_240364998.1;Name=WP_240364998.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09330;product=glycosyl transferase;protein_id=WP_240364998.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1756192	1757119	.	-	.	ID=gene-PKHYL_RS09335;Name=PKHYL_RS09335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09335;old_locus_tag=PKHYL_22750;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1756192	1757119	.	-	0	ID=cds-PKHYL_RS09335;Parent=gene-PKHYL_RS09335;Note=frameshifted;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513510.1;locus_tag=PKHYL_RS09335;product=branched-chain amino acid transaminase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1757432	1760295	.	-	.	ID=gene-PKHYL_RS09340;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=pseudogene;locus_tag=PKHYL_RS09340;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1757432	1760295	.	-	0	ID=cds-PKHYL_RS09340;Parent=gene-PKHYL_RS09340;Note=frameshifted;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201282.1;locus_tag=PKHYL_RS09340;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1760694	1761158	.	+	.	ID=gene-PKHYL_RS09345;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=PKHYL_RS09345;old_locus_tag=PKHYL_22780
NZ_AP019516.1	Protein Homology	CDS	1760694	1761158	.	+	0	ID=cds-WP_212563599.1;Parent=gene-PKHYL_RS09345;Dbxref=Genbank:WP_212563599.1;Name=WP_212563599.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280490.1;locus_tag=PKHYL_RS09345;product=sulfurtransferase complex subunit TusD;protein_id=WP_212563599.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1761208	1761534	.	+	.	ID=gene-PKHYL_RS09350;Name=PKHYL_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09350;old_locus_tag=PKHYL_22790
NZ_AP019516.1	Protein Homology	CDS	1761208	1761534	.	+	0	ID=cds-WP_240364999.1;Parent=gene-PKHYL_RS09350;Dbxref=Genbank:WP_240364999.1;Name=WP_240364999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443374.1;locus_tag=PKHYL_RS09350;product=hypothetical protein;protein_id=WP_240364999.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1761588	1761917	.	+	.	ID=gene-PKHYL_RS09355;Name=PKHYL_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09355;old_locus_tag=PKHYL_22800
NZ_AP019516.1	Protein Homology	CDS	1761588	1761917	.	+	0	ID=cds-WP_071001449.1;Parent=gene-PKHYL_RS09355;Dbxref=Genbank:WP_071001449.1;Name=WP_071001449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513506.1;locus_tag=PKHYL_RS09355;product=hypothetical protein;protein_id=WP_071001449.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1761914	1762273	.	+	.	ID=gene-PKHYL_RS09360;Name=PKHYL_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09360;old_locus_tag=PKHYL_22810
NZ_AP019516.1	Protein Homology	CDS	1761914	1762273	.	+	0	ID=cds-WP_240365000.1;Parent=gene-PKHYL_RS09360;Dbxref=Genbank:WP_240365000.1;Name=WP_240365000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513505.1;locus_tag=PKHYL_RS09360;product=TusE/DsrC/DsvC family sulfur relay protein;protein_id=WP_240365000.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1762366	1762926	.	-	.	ID=gene-PKHYL_RS09365;Name=PKHYL_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09365;old_locus_tag=PKHYL_22820
NZ_AP019516.1	Protein Homology	CDS	1762366	1762926	.	-	0	ID=cds-WP_240365001.1;Parent=gene-PKHYL_RS09365;Dbxref=Genbank:WP_240365001.1;Name=WP_240365001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513504.1;locus_tag=PKHYL_RS09365;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_240365001.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1763220	1763327	.	+	.	ID=gene-PKHYL_RS09370;Name=PKHYL_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09370
NZ_AP019516.1	Protein Homology	CDS	1763220	1763327	.	+	0	ID=cds-WP_240365002.1;Parent=gene-PKHYL_RS09370;Dbxref=Genbank:WP_240365002.1;Name=WP_240365002.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004694480.1;locus_tag=PKHYL_RS09370;product=entericidin A/B family lipoprotein;protein_id=WP_240365002.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1763429	1764700	.	-	.	ID=gene-PKHYL_RS09375;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=pseudogene;locus_tag=PKHYL_RS09375;old_locus_tag=PKHYL_22850;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1763429	1764700	.	-	0	ID=cds-PKHYL_RS09375;Parent=gene-PKHYL_RS09375;Note=frameshifted;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673946.1;locus_tag=PKHYL_RS09375;product=radical SAM family heme chaperone HemW;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1765221	1765709	.	+	.	ID=gene-PKHYL_RS09380;Name=PKHYL_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09380;old_locus_tag=PKHYL_22870
NZ_AP019516.1	Protein Homology	CDS	1765221	1765709	.	+	0	ID=cds-WP_240365003.1;Parent=gene-PKHYL_RS09380;Dbxref=Genbank:WP_240365003.1;Name=WP_240365003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443369.1;locus_tag=PKHYL_RS09380;product=EVE domain-containing protein;protein_id=WP_240365003.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1766055	1767425	.	+	.	ID=gene-PKHYL_RS09385;Name=PKHYL_RS09385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09385;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1766055	1767425	.	+	0	ID=cds-PKHYL_RS09385;Parent=gene-PKHYL_RS09385;Note=frameshifted;Ontology_term=GO:0006855,GO:0009410,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513501.1;locus_tag=PKHYL_RS09385;product=MATE family efflux transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1767702	1768094	.	+	.	ID=gene-PKHYL_RS09390;Name=PKHYL_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09390;old_locus_tag=PKHYL_22910
NZ_AP019516.1	Protein Homology	CDS	1767702	1768094	.	+	0	ID=cds-WP_240365004.1;Parent=gene-PKHYL_RS09390;Dbxref=Genbank:WP_240365004.1;Name=WP_240365004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004915532.1;locus_tag=PKHYL_RS09390;product=acetyl-CoA carboxylase%2C biotin carboxyl carrier protein;protein_id=WP_240365004.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1768220	1769581	.	+	.	ID=gene-PKHYL_RS09395;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=PKHYL_RS09395;old_locus_tag=PKHYL_22920
NZ_AP019516.1	Protein Homology	CDS	1768220	1769581	.	+	0	ID=cds-WP_071001443.1;Parent=gene-PKHYL_RS09395;Dbxref=Genbank:WP_071001443.1;Name=WP_071001443.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009501924.1;locus_tag=PKHYL_RS09395;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_071001443.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1769820	1770365	.	-	.	ID=gene-PKHYL_RS09400;Name=PKHYL_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09400;old_locus_tag=PKHYL_22930
NZ_AP019516.1	GeneMarkS-2+	CDS	1769820	1770365	.	-	0	ID=cds-WP_240365005.1;Parent=gene-PKHYL_RS09400;Dbxref=Genbank:WP_240365005.1;Name=WP_240365005.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09400;product=hypothetical protein;protein_id=WP_240365005.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1770645	1772428	.	-	.	ID=gene-PKHYL_RS09405;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=pseudogene;locus_tag=PKHYL_RS09405;old_locus_tag=PKHYL_22940;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1770645	1772428	.	-	0	ID=cds-PKHYL_RS09405;Parent=gene-PKHYL_RS09405;Note=frameshifted;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201254.1;locus_tag=PKHYL_RS09405;product=2-isopropylmalate synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1772674	1773136	.	+	.	ID=gene-PKHYL_RS09410;Name=PKHYL_RS09410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09410;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1772674	1773136	.	+	0	ID=cds-PKHYL_RS09410;Parent=gene-PKHYL_RS09410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009502005.1;locus_tag=PKHYL_RS09410;product=Lrp/AsnC family transcriptional regulator;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1773159	1774415	.	-	.	ID=gene-PKHYL_RS09415;Name=PKHYL_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09415;old_locus_tag=PKHYL_22970
NZ_AP019516.1	Protein Homology	CDS	1773159	1774415	.	-	0	ID=cds-WP_240365006.1;Parent=gene-PKHYL_RS09415;Dbxref=Genbank:WP_240365006.1;Name=WP_240365006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201251.1;locus_tag=PKHYL_RS09415;product=YbfB/YjiJ family MFS transporter;protein_id=WP_240365006.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1774543	1775885	.	-	.	ID=gene-PKHYL_RS09420;Name=PKHYL_RS09420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09420;old_locus_tag=PKHYL_22980;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1774543	1775885	.	-	0	ID=cds-PKHYL_RS09420;Parent=gene-PKHYL_RS09420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513494.1;locus_tag=PKHYL_RS09420;product=AarF/ABC1/UbiB kinase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1775967	1776757	.	-	.	ID=gene-PKHYL_RS09425;Name=PKHYL_RS09425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09425;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1775967	1776757	.	-	0	ID=cds-PKHYL_RS09425;Parent=gene-PKHYL_RS09425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201246.1;locus_tag=PKHYL_RS09425;product=HesA/MoeB/ThiF family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1776802	1777674	.	-	.	ID=gene-PKHYL_RS09430;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=PKHYL_RS09430;old_locus_tag=PKHYL_23010
NZ_AP019516.1	Protein Homology	CDS	1776802	1777674	.	-	0	ID=cds-WP_240365007.1;Parent=gene-PKHYL_RS09430;Dbxref=Genbank:WP_240365007.1;Name=WP_240365007.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513492.1;locus_tag=PKHYL_RS09430;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_240365007.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1777723	1779260	.	-	.	ID=gene-PKHYL_RS09435;Name=PKHYL_RS09435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09435;old_locus_tag=PKHYL_23040;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1777723	1779260	.	-	0	ID=cds-PKHYL_RS09435;Parent=gene-PKHYL_RS09435;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960990.1;locus_tag=PKHYL_RS09435;product=MFS transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1780117	1782306	.	+	.	ID=gene-PKHYL_RS09445;Name=katG;gbkey=Gene;gene=katG;gene_biotype=pseudogene;locus_tag=PKHYL_RS09445;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1780117	1782306	.	+	0	ID=cds-PKHYL_RS09445;Parent=gene-PKHYL_RS09445;Note=frameshifted;Ontology_term=GO:0006979,GO:0004096,GO:0004601;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004754348.1;locus_tag=PKHYL_RS09445;product=catalase/peroxidase HPI;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1782635	1783564	.	+	.	ID=gene-PKHYL_RS09450;Name=PKHYL_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09450;old_locus_tag=PKHYL_23090
NZ_AP019516.1	Protein Homology	CDS	1782635	1783564	.	+	0	ID=cds-WP_240365009.1;Parent=gene-PKHYL_RS09450;Dbxref=Genbank:WP_240365009.1;Name=WP_240365009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443358.1;locus_tag=PKHYL_RS09450;product=LysR substrate-binding domain-containing protein;protein_id=WP_240365009.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1783878	1784897	.	+	.	ID=gene-PKHYL_RS09455;Name=PKHYL_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09455;old_locus_tag=PKHYL_23100
NZ_AP019516.1	Protein Homology	CDS	1783878	1784897	.	+	0	ID=cds-WP_240365010.1;Parent=gene-PKHYL_RS09455;Dbxref=Genbank:WP_240365010.1;Name=WP_240365010.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013199.2;locus_tag=PKHYL_RS09455;product=hypothetical protein;protein_id=WP_240365010.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1784851	1785852	.	+	.	ID=gene-PKHYL_RS09460;Name=PKHYL_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09460;old_locus_tag=PKHYL_23110
NZ_AP019516.1	GeneMarkS-2+	CDS	1784851	1785852	.	+	0	ID=cds-WP_240365011.1;Parent=gene-PKHYL_RS09460;Dbxref=Genbank:WP_240365011.1;Name=WP_240365011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09460;product=hypothetical protein;protein_id=WP_240365011.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1785836	1786207	.	+	.	ID=gene-PKHYL_RS09465;Name=PKHYL_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09465;old_locus_tag=PKHYL_23120
NZ_AP019516.1	GeneMarkS-2+	CDS	1785836	1786207	.	+	0	ID=cds-WP_240365012.1;Parent=gene-PKHYL_RS09465;Dbxref=Genbank:WP_240365012.1;Name=WP_240365012.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09465;product=hypothetical protein;protein_id=WP_240365012.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1786204	1786326	.	+	.	ID=gene-PKHYL_RS17565;Name=PKHYL_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17565
NZ_AP019516.1	GeneMarkS-2+	CDS	1786204	1786326	.	+	0	ID=cds-WP_269778144.1;Parent=gene-PKHYL_RS17565;Dbxref=Genbank:WP_269778144.1;Name=WP_269778144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17565;product=hypothetical protein;protein_id=WP_269778144.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1786608	1787627	.	+	.	ID=gene-PKHYL_RS09470;Name=PKHYL_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09470;old_locus_tag=PKHYL_23130
NZ_AP019516.1	Protein Homology	CDS	1786608	1787627	.	+	0	ID=cds-WP_240365013.1;Parent=gene-PKHYL_RS09470;Dbxref=Genbank:WP_240365013.1;Name=WP_240365013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280510.1;locus_tag=PKHYL_RS09470;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_240365013.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1787658	1787855	.	+	.	ID=gene-PKHYL_RS09475;Name=PKHYL_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09475;old_locus_tag=PKHYL_23140
NZ_AP019516.1	GeneMarkS-2+	CDS	1787658	1787855	.	+	0	ID=cds-WP_240365014.1;Parent=gene-PKHYL_RS09475;Dbxref=Genbank:WP_240365014.1;Name=WP_240365014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09475;product=hypothetical protein;protein_id=WP_240365014.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1787913	1788872	.	-	.	ID=gene-PKHYL_RS09480;Name=PKHYL_RS09480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09480;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1787913	1788872	.	-	0	ID=cds-PKHYL_RS09480;Parent=gene-PKHYL_RS09480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443355.1;locus_tag=PKHYL_RS09480;product=AEC family transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1789113	1791008	.	-	.	ID=gene-PKHYL_RS09485;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=PKHYL_RS09485;old_locus_tag=PKHYL_23170
NZ_AP019516.1	Protein Homology	CDS	1789113	1791008	.	-	0	ID=cds-WP_223332893.1;Parent=gene-PKHYL_RS09485;Dbxref=Genbank:WP_223332893.1;Name=WP_223332893.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201221.1;locus_tag=PKHYL_RS09485;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_223332893.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1791409	1791807	.	-	.	ID=gene-PKHYL_RS09490;Name=PKHYL_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09490;old_locus_tag=PKHYL_23180
NZ_AP019516.1	GeneMarkS-2+	CDS	1791409	1791807	.	-	0	ID=cds-WP_240365015.1;Parent=gene-PKHYL_RS09490;Dbxref=Genbank:WP_240365015.1;Name=WP_240365015.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09490;product=hypothetical protein;protein_id=WP_240365015.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1792087	1792437	.	-	.	ID=gene-PKHYL_RS09495;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=PKHYL_RS09495;old_locus_tag=PKHYL_23190
NZ_AP019516.1	Protein Homology	CDS	1792087	1792437	.	-	0	ID=cds-WP_071001428.1;Parent=gene-PKHYL_RS09495;Dbxref=Genbank:WP_071001428.1;Name=WP_071001428.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201219.1;locus_tag=PKHYL_RS09495;product=Grx4 family monothiol glutaredoxin;protein_id=WP_071001428.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1792555	1793058	.	-	.	ID=gene-PKHYL_RS09500;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=PKHYL_RS09500;old_locus_tag=PKHYL_23200
NZ_AP019516.1	Protein Homology	CDS	1792555	1793058	.	-	0	ID=cds-WP_058025333.1;Parent=gene-PKHYL_RS09500;Dbxref=Genbank:WP_058025333.1;Name=WP_058025333.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004937279.1;locus_tag=PKHYL_RS09500;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_058025333.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1793433	1794546	.	+	.	ID=gene-PKHYL_RS09505;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=pseudogene;locus_tag=PKHYL_RS09505;old_locus_tag=PKHYL_23210;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1793433	1794546	.	+	0	ID=cds-PKHYL_RS09505;Parent=gene-PKHYL_RS09505;Note=frameshifted;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201209.1;locus_tag=PKHYL_RS09505;product=tRNA 2-thiouridine(34) synthase MnmA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1794784	1796148	.	+	.	ID=gene-PKHYL_RS09510;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=PKHYL_RS09510;old_locus_tag=PKHYL_23220
NZ_AP019516.1	Protein Homology	CDS	1794784	1796148	.	+	0	ID=cds-WP_240366520.1;Parent=gene-PKHYL_RS09510;Dbxref=Genbank:WP_240366520.1;Name=WP_240366520.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960230.1;locus_tag=PKHYL_RS09510;product=adenylosuccinate lyase;protein_id=WP_240366520.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1796301	1796522	.	-	.	ID=gene-PKHYL_RS09515;Name=PKHYL_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09515;old_locus_tag=PKHYL_23230
NZ_AP019516.1	Protein Homology	CDS	1796301	1796522	.	-	0	ID=cds-WP_240365016.1;Parent=gene-PKHYL_RS09515;Dbxref=Genbank:WP_240365016.1;Name=WP_240365016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201200.1;locus_tag=PKHYL_RS09515;product=NF038104 family lipoprotein;protein_id=WP_240365016.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1796654	1797827	.	+	.	ID=gene-PKHYL_RS09520;Name=PKHYL_RS09520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09520;old_locus_tag=PKHYL_23240;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1796654	1797827	.	+	0	ID=cds-PKHYL_RS09520;Parent=gene-PKHYL_RS09520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513480.1;locus_tag=PKHYL_RS09520;product=cupin domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1798016	1798708	.	-	.	ID=gene-PKHYL_RS09525;Name=PKHYL_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09525;old_locus_tag=PKHYL_23260
NZ_AP019516.1	Protein Homology	CDS	1798016	1798708	.	-	0	ID=cds-WP_071001423.1;Parent=gene-PKHYL_RS09525;Dbxref=Genbank:WP_071001423.1;Name=WP_071001423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280520.1;locus_tag=PKHYL_RS09525;product=1-pyrroline-5-carboxylate dehydrogenase;protein_id=WP_071001423.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1798720	1800432	.	-	.	ID=gene-PKHYL_RS09530;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=PKHYL_RS09530;old_locus_tag=PKHYL_23270
NZ_AP019516.1	Protein Homology	CDS	1798720	1800432	.	-	0	ID=cds-WP_240365017.1;Parent=gene-PKHYL_RS09530;Dbxref=Genbank:WP_240365017.1;Name=WP_240365017.1;Ontology_term=GO:0006355,GO:0010133,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline catabolic process to glutamate|0010133||IEA;inference=COORDINATES: protein motif:HMM:NF008869.0;locus_tag=PKHYL_RS09530;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA;protein_id=WP_240365017.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1800462	1801235	.	-	.	ID=gene-PKHYL_RS09535;Name=PKHYL_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09535;old_locus_tag=PKHYL_23280
NZ_AP019516.1	Protein Homology	CDS	1800462	1801235	.	-	0	ID=cds-WP_240365018.1;Parent=gene-PKHYL_RS09535;Dbxref=Genbank:WP_240365018.1;Name=WP_240365018.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013761.2;locus_tag=PKHYL_RS09535;product=proline dehydrogenase family protein;protein_id=WP_240365018.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1801141	1801968	.	-	.	ID=gene-PKHYL_RS09540;Name=PKHYL_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09540;old_locus_tag=PKHYL_23290
NZ_AP019516.1	Protein Homology	CDS	1801141	1801968	.	-	0	ID=cds-WP_240365019.1;Parent=gene-PKHYL_RS09540;Dbxref=Genbank:WP_240365019.1;Name=WP_240365019.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026200.2;locus_tag=PKHYL_RS09540;product=proline dehydrogenase family protein;protein_id=WP_240365019.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1802675	1803970	.	-	.	ID=gene-PKHYL_RS09545;Name=PKHYL_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09545;old_locus_tag=PKHYL_23300
NZ_AP019516.1	Protein Homology	CDS	1802675	1803970	.	-	0	ID=cds-WP_093069039.1;Parent=gene-PKHYL_RS09545;Dbxref=Genbank:WP_093069039.1;Name=WP_093069039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960787.1;locus_tag=PKHYL_RS09545;product=NCS2 family permease;protein_id=WP_093069039.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1804518	1805240	.	+	.	ID=gene-PKHYL_RS09550;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=PKHYL_RS09550;old_locus_tag=PKHYL_23310
NZ_AP019516.1	Protein Homology	CDS	1804518	1805240	.	+	0	ID=cds-WP_058025342.1;Parent=gene-PKHYL_RS09550;Dbxref=Genbank:WP_058025342.1;Name=WP_058025342.1;Ontology_term=GO:1902600,GO:0015078,GO:0005886;gbkey=CDS;gene=tolQ;go_component=plasma membrane|0005886||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443339.1;locus_tag=PKHYL_RS09550;product=protein TolQ;protein_id=WP_058025342.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1805237	1805697	.	+	.	ID=gene-PKHYL_RS09555;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=pseudogene;locus_tag=PKHYL_RS09555;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1805237	1805697	.	+	0	ID=cds-PKHYL_RS09555;Parent=gene-PKHYL_RS09555;Note=frameshifted;Ontology_term=GO:0061024,GO:1902600,GO:0015078,GO:0098567;gbkey=CDS;gene=tolR;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=membrane organization|0061024||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280523.1;locus_tag=PKHYL_RS09555;product=protein TolR;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1805755	1806549	.	+	.	ID=gene-PKHYL_RS09560;Name=PKHYL_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09560;old_locus_tag=PKHYL_23340
NZ_AP019516.1	GeneMarkS-2+	CDS	1805755	1806549	.	+	0	ID=cds-WP_240365020.1;Parent=gene-PKHYL_RS09560;Dbxref=Genbank:WP_240365020.1;Name=WP_240365020.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09560;product=hypothetical protein;protein_id=WP_240365020.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1806549	1806779	.	+	.	ID=gene-PKHYL_RS09565;Name=PKHYL_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09565
NZ_AP019516.1	Protein Homology	CDS	1806549	1806779	.	+	0	ID=cds-WP_240366521.1;Parent=gene-PKHYL_RS09565;Dbxref=Genbank:WP_240366521.1;Name=WP_240366521.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024503.2;locus_tag=PKHYL_RS09565;product=cell envelope integrity protein TolA;protein_id=WP_240366521.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1807057	1807806	.	+	.	ID=gene-PKHYL_RS09570;Name=PKHYL_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09570;old_locus_tag=PKHYL_23360
NZ_AP019516.1	Protein Homology	CDS	1807057	1807806	.	+	0	ID=cds-WP_240365021.1;Parent=gene-PKHYL_RS09570;Dbxref=Genbank:WP_240365021.1;Name=WP_240365021.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015980.2;locus_tag=PKHYL_RS09570;product=hypothetical protein;protein_id=WP_240365021.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1808139	1808351	.	+	.	ID=gene-PKHYL_RS09575;Name=PKHYL_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09575;old_locus_tag=PKHYL_23370
NZ_AP019516.1	GeneMarkS-2+	CDS	1808139	1808351	.	+	0	ID=cds-WP_240365022.1;Parent=gene-PKHYL_RS09575;Dbxref=Genbank:WP_240365022.1;Name=WP_240365022.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09575;product=hypothetical protein;protein_id=WP_240365022.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1808831	1809745	.	+	.	ID=gene-PKHYL_RS09580;Name=PKHYL_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09580;old_locus_tag=PKHYL_23380
NZ_AP019516.1	Protein Homology	CDS	1808831	1809745	.	+	0	ID=cds-WP_269778145.1;Parent=gene-PKHYL_RS09580;Dbxref=Genbank:WP_269778145.1;Name=WP_269778145.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013056.2;locus_tag=PKHYL_RS09580;product=hypothetical protein;protein_id=WP_269778145.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1809721	1810236	.	+	.	ID=gene-PKHYL_RS17570;Name=PKHYL_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17570;old_locus_tag=PKHYL_23390
NZ_AP019516.1	Protein Homology	CDS	1809721	1810236	.	+	0	ID=cds-WP_269778146.1;Parent=gene-PKHYL_RS17570;Dbxref=Genbank:WP_269778146.1;Name=WP_269778146.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037981.1;locus_tag=PKHYL_RS17570;product=hypothetical protein;protein_id=WP_269778146.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1810343	1810966	.	-	.	ID=gene-PKHYL_RS09585;Name=PKHYL_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09585;old_locus_tag=PKHYL_23400
NZ_AP019516.1	Protein Homology	CDS	1810343	1810966	.	-	0	ID=cds-WP_240365023.1;Parent=gene-PKHYL_RS09585;Dbxref=Genbank:WP_240365023.1;Name=WP_240365023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514234.1;locus_tag=PKHYL_RS09585;product=TetR/AcrR family transcriptional regulator;protein_id=WP_240365023.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1811471	1811992	.	+	.	ID=gene-PKHYL_RS09590;Name=uraD;gbkey=Gene;gene=uraD;gene_biotype=protein_coding;locus_tag=PKHYL_RS09590;old_locus_tag=PKHYL_23410
NZ_AP019516.1	Protein Homology	CDS	1811471	1811992	.	+	0	ID=cds-WP_093069023.1;Parent=gene-PKHYL_RS09590;Dbxref=Genbank:WP_093069023.1;Name=WP_093069023.1;Ontology_term=GO:0019628;gbkey=CDS;gene=uraD;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444093.1;locus_tag=PKHYL_RS09590;product=2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase;protein_id=WP_093069023.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1812111	1812479	.	+	.	ID=gene-PKHYL_RS09595;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=PKHYL_RS09595;old_locus_tag=PKHYL_23420
NZ_AP019516.1	Protein Homology	CDS	1812111	1812479	.	+	0	ID=cds-WP_093069021.1;Parent=gene-PKHYL_RS09595;Dbxref=Genbank:WP_093069021.1;Name=WP_093069021.1;Ontology_term=GO:0019628;gbkey=CDS;gene=uraH;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514236.1;locus_tag=PKHYL_RS09595;product=hydroxyisourate hydrolase;protein_id=WP_093069021.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1812573	1813407	.	+	.	ID=gene-PKHYL_RS09600;Name=PKHYL_RS09600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09600;old_locus_tag=PKHYL_23430;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1812573	1813407	.	+	0	ID=cds-PKHYL_RS09600;Parent=gene-PKHYL_RS09600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017945.2;locus_tag=PKHYL_RS09600;product=urate hydroxylase PuuD;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1813341	1813892	.	+	.	ID=gene-PKHYL_RS09605;Name=PKHYL_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09605;old_locus_tag=PKHYL_23440
NZ_AP019516.1	GeneMarkS-2+	CDS	1813341	1813892	.	+	0	ID=cds-WP_240366569.1;Parent=gene-PKHYL_RS09605;Dbxref=Genbank:WP_240366569.1;Name=WP_240366569.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09605;product=hypothetical protein;protein_id=WP_240366569.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1813975	1814954	.	+	.	ID=gene-PKHYL_RS09610;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=pseudogene;locus_tag=PKHYL_RS09610;old_locus_tag=PKHYL_23450;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1813975	1814954	.	+	0	ID=cds-PKHYL_RS09610;Parent=gene-PKHYL_RS09610;Note=frameshifted;Ontology_term=GO:0000256,GO:0016810;gbkey=CDS;gene=puuE;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514239.1;locus_tag=PKHYL_RS09610;product=allantoinase PuuE;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1815101	1816174	.	+	.	ID=gene-PKHYL_RS09615;Name=alc;gbkey=Gene;gene=alc;gene_biotype=pseudogene;locus_tag=PKHYL_RS09615;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1815101	1816174	.	+	0	ID=cds-PKHYL_RS09615;Parent=gene-PKHYL_RS09615;Note=frameshifted;Ontology_term=GO:0000256,GO:0004037;gbkey=CDS;gene=alc;go_function=allantoicase activity|0004037||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004821658.1;locus_tag=PKHYL_RS09615;product=allantoicase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1816174	1816701	.	+	.	ID=gene-PKHYL_RS09620;Name=PKHYL_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09620;old_locus_tag=PKHYL_23480
NZ_AP019516.1	Protein Homology	CDS	1816174	1816701	.	+	0	ID=cds-WP_093069012.1;Parent=gene-PKHYL_RS09620;Dbxref=Genbank:WP_093069012.1;Name=WP_093069012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444096.1;locus_tag=PKHYL_RS09620;product=ureidoglycolate lyase;protein_id=WP_093069012.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1816843	1817382	.	-	.	ID=gene-PKHYL_RS17575;Name=PKHYL_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17575;old_locus_tag=PKHYL_23490
NZ_AP019516.1	Protein Homology	CDS	1816843	1817382	.	-	0	ID=cds-WP_269778147.1;Parent=gene-PKHYL_RS17575;Dbxref=Genbank:WP_269778147.1;Name=WP_269778147.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF014081.2;locus_tag=PKHYL_RS17575;product=amidohydrolase family protein;protein_id=WP_269778147.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1817324	1818136	.	-	.	ID=gene-PKHYL_RS17580;Name=PKHYL_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17580;old_locus_tag=PKHYL_23500
NZ_AP019516.1	Protein Homology	CDS	1817324	1818136	.	-	0	ID=cds-WP_269778148.1;Parent=gene-PKHYL_RS17580;Dbxref=Genbank:WP_269778148.1;Name=WP_269778148.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF006679.0;locus_tag=PKHYL_RS17580;product=guanine deaminase;protein_id=WP_269778148.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1818362	1818505	.	-	.	ID=gene-PKHYL_RS09630;Name=PKHYL_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09630;old_locus_tag=PKHYL_23510
NZ_AP019516.1	Protein Homology	CDS	1818362	1818505	.	-	0	ID=cds-WP_240365024.1;Parent=gene-PKHYL_RS09630;Dbxref=Genbank:WP_240365024.1;Name=WP_240365024.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024869.2;locus_tag=PKHYL_RS09630;product=XdhC family protein;protein_id=WP_240365024.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1818513	1818899	.	-	.	ID=gene-PKHYL_RS09635;Name=PKHYL_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09635;old_locus_tag=PKHYL_23520
NZ_AP019516.1	Protein Homology	CDS	1818513	1818899	.	-	0	ID=cds-WP_240365025.1;Parent=gene-PKHYL_RS09635;Dbxref=Genbank:WP_240365025.1;Name=WP_240365025.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024869.2;locus_tag=PKHYL_RS09635;product=XdhC family protein;protein_id=WP_240365025.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1818901	1821948	.	-	.	ID=gene-PKHYL_RS09640;Name=xdhB;gbkey=Gene;gene=xdhB;gene_biotype=protein_coding;locus_tag=PKHYL_RS09640;old_locus_tag=PKHYL_23530
NZ_AP019516.1	Protein Homology	CDS	1818901	1821948	.	-	0	ID=cds-WP_240365026.1;Parent=gene-PKHYL_RS09640;Dbxref=Genbank:WP_240365026.1;Name=WP_240365026.1;Ontology_term=GO:0009115,GO:0004854,GO:0043546;gbkey=CDS;gene=xdhB;go_function=xanthine dehydrogenase activity|0004854||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=xanthine catabolic process|0009115||IEA;inference=COORDINATES: protein motif:HMM:TIGR02965.1;locus_tag=PKHYL_RS09640;product=xanthine dehydrogenase molybdopterin binding subunit;protein_id=WP_240365026.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1822046	1823470	.	-	.	ID=gene-PKHYL_RS09645;Name=PKHYL_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09645;old_locus_tag=PKHYL_23540
NZ_AP019516.1	Protein Homology	CDS	1822046	1823470	.	-	0	ID=cds-WP_240365027.1;Parent=gene-PKHYL_RS09645;Dbxref=Genbank:WP_240365027.1;Name=WP_240365027.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF013134.2;locus_tag=PKHYL_RS09645;product=FAD binding domain-containing protein;protein_id=WP_240365027.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1823488	1823751	.	-	.	ID=gene-PKHYL_RS09650;Name=PKHYL_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09650;old_locus_tag=PKHYL_23550
NZ_AP019516.1	Protein Homology	CDS	1823488	1823751	.	-	0	ID=cds-WP_240365028.1;Parent=gene-PKHYL_RS09650;Dbxref=Genbank:WP_240365028.1;Name=WP_240365028.1;Ontology_term=GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: protein motif:HMM:NF012339.2;locus_tag=PKHYL_RS09650;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_240365028.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1824729	1825340	.	-	.	ID=gene-PKHYL_RS09655;Name=PKHYL_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09655;old_locus_tag=PKHYL_23560
NZ_AP019516.1	Protein Homology	CDS	1824729	1825340	.	-	0	ID=cds-WP_240365029.1;Parent=gene-PKHYL_RS09655;Dbxref=Genbank:WP_240365029.1;Name=WP_240365029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443332.1;locus_tag=PKHYL_RS09655;product=flavodoxin family protein;protein_id=WP_240365029.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1825444	1825944	.	-	.	ID=gene-PKHYL_RS09660;Name=PKHYL_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09660;old_locus_tag=PKHYL_23570
NZ_AP019516.1	Protein Homology	CDS	1825444	1825944	.	-	0	ID=cds-WP_240365030.1;Parent=gene-PKHYL_RS09660;Dbxref=Genbank:WP_240365030.1;Name=WP_240365030.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014619.2;locus_tag=PKHYL_RS09660;product=laccase domain-containing protein;protein_id=WP_240365030.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1825829	1826440	.	-	.	ID=gene-PKHYL_RS09665;Name=PKHYL_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09665;old_locus_tag=PKHYL_23580
NZ_AP019516.1	Protein Homology	CDS	1825829	1826440	.	-	0	ID=cds-WP_240365031.1;Parent=gene-PKHYL_RS09665;Dbxref=Genbank:WP_240365031.1;Name=WP_240365031.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014619.2;locus_tag=PKHYL_RS09665;product=laccase domain-containing protein;protein_id=WP_240365031.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1826554	1827780	.	-	.	ID=gene-PKHYL_RS09670;Name=PKHYL_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09670;old_locus_tag=PKHYL_23590
NZ_AP019516.1	Protein Homology	CDS	1826554	1827780	.	-	0	ID=cds-WP_201587692.1;Parent=gene-PKHYL_RS09670;Dbxref=Genbank:WP_201587692.1;Name=WP_201587692.1;Ontology_term=GO:0001522,GO:0009451,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513463.1;locus_tag=PKHYL_RS09670;product=RluA family pseudouridine synthase;protein_id=WP_201587692.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1828694	1829701	.	+	.	ID=gene-PKHYL_RS09675;Name=PKHYL_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09675;old_locus_tag=PKHYL_23600
NZ_AP019516.1	Protein Homology	CDS	1828694	1829701	.	+	0	ID=cds-WP_240366522.1;Parent=gene-PKHYL_RS09675;Dbxref=Genbank:WP_240366522.1;Name=WP_240366522.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03302.1;locus_tag=PKHYL_RS09675;product=outer membrane protein assembly factor BamD;protein_id=WP_240366522.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1829840	1832055	.	+	.	ID=gene-PKHYL_RS17585;Name=PKHYL_RS17585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17585;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1829840	1832055	.	+	0	ID=cds-PKHYL_RS17585;Parent=gene-PKHYL_RS17585;Note=frameshifted;Ontology_term=GO:0006260,GO:0003677,GO:0003896,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA primase activity|0003896||IEA,zinc ion binding|0008270||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201152.1;locus_tag=PKHYL_RS17585;product=CHC2 zinc finger domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1832579	1834504	.	+	.	ID=gene-PKHYL_RS09705;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=pseudogene;locus_tag=PKHYL_RS09705;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1832579	1834504	.	+	0	ID=cds-PKHYL_RS09705;Parent=gene-PKHYL_RS09705;Note=frameshifted%3B internal stop;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002051119.1;locus_tag=PKHYL_RS09705;product=RNA polymerase sigma factor RpoD;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1834706	1835779	.	-	.	ID=gene-PKHYL_RS09710;Name=PKHYL_RS09710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09710;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1834706	1835779	.	-	0	ID=cds-PKHYL_RS09710;Parent=gene-PKHYL_RS09710;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611560.1;locus_tag=PKHYL_RS09710;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1835849	1836019	.	-	.	ID=gene-PKHYL_RS09715;Name=PKHYL_RS09715;end_range=1836019,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09715;old_locus_tag=PKHYL_23690;partial=true;pseudo=true;start_range=.,1835849
NZ_AP019516.1	Protein Homology	CDS	1835849	1836019	.	-	0	ID=cds-PKHYL_RS09715;Parent=gene-PKHYL_RS09715;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1836019,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000953322.1;locus_tag=PKHYL_RS09715;partial=true;product=STAS domain-containing protein;pseudo=true;start_range=.,1835849;transl_table=11
NZ_AP019516.1	RefSeq	gene	1836185	1836667	.	+	.	ID=gene-PKHYL_RS17590;Name=PKHYL_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17590;old_locus_tag=PKHYL_23700
NZ_AP019516.1	Protein Homology	CDS	1836185	1836667	.	+	0	ID=cds-WP_269778149.1;Parent=gene-PKHYL_RS17590;Dbxref=Genbank:WP_269778149.1;Name=WP_269778149.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013246.2;locus_tag=PKHYL_RS17590;product=bestrophin family protein;protein_id=WP_269778149.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1836684	1837109	.	+	.	ID=gene-PKHYL_RS17595;Name=PKHYL_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17595;old_locus_tag=PKHYL_23710
NZ_AP019516.1	Protein Homology	CDS	1836684	1837109	.	+	0	ID=cds-WP_269778150.1;Parent=gene-PKHYL_RS17595;Dbxref=Genbank:WP_269778150.1;Name=WP_269778150.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013246.2;locus_tag=PKHYL_RS17595;product=bestrophin family ion channel;protein_id=WP_269778150.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1837275	1837676	.	+	.	ID=gene-PKHYL_RS09725;Name=PKHYL_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09725;old_locus_tag=PKHYL_23720
NZ_AP019516.1	Protein Homology	CDS	1837275	1837676	.	+	0	ID=cds-WP_093070961.1;Parent=gene-PKHYL_RS09725;Dbxref=Genbank:WP_093070961.1;Name=WP_093070961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198754.1;locus_tag=PKHYL_RS09725;product=DUF493 domain-containing protein;protein_id=WP_093070961.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1838173	1840447	.	+	.	ID=gene-PKHYL_RS09730;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=pseudogene;locus_tag=PKHYL_RS09730;old_locus_tag=PKHYL_23730;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1838173	1840447	.	+	0	ID=cds-PKHYL_RS09730;Parent=gene-PKHYL_RS09730;Note=frameshifted;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003669739.1;locus_tag=PKHYL_RS09730;product=ribonucleoside-diphosphate reductase subunit alpha;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1840579	1840770	.	+	.	ID=gene-PKHYL_RS09735;Name=PKHYL_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09735;old_locus_tag=PKHYL_23760
NZ_AP019516.1	Protein Homology	CDS	1840579	1840770	.	+	0	ID=cds-WP_240365035.1;Parent=gene-PKHYL_RS09735;Dbxref=Genbank:WP_240365035.1;Name=WP_240365035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016657774.1;locus_tag=PKHYL_RS09735;product=hypothetical protein;protein_id=WP_240365035.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1841278	1842165	.	+	.	ID=gene-PKHYL_RS09740;Name=PKHYL_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09740;old_locus_tag=PKHYL_23780
NZ_AP019516.1	GeneMarkS-2+	CDS	1841278	1842165	.	+	0	ID=cds-WP_093070956.1;Parent=gene-PKHYL_RS09740;Dbxref=Genbank:WP_093070956.1;Name=WP_093070956.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09740;product=hypothetical protein;protein_id=WP_093070956.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1842232	1842480	.	+	.	ID=gene-PKHYL_RS09745;Name=PKHYL_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09745;old_locus_tag=PKHYL_23790
NZ_AP019516.1	GeneMarkS-2+	CDS	1842232	1842480	.	+	0	ID=cds-WP_240365036.1;Parent=gene-PKHYL_RS09745;Dbxref=Genbank:WP_240365036.1;Name=WP_240365036.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09745;product=hypothetical protein;protein_id=WP_240365036.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1842630	1842818	.	+	.	ID=gene-PKHYL_RS09750;Name=PKHYL_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09750;old_locus_tag=PKHYL_23800
NZ_AP019516.1	Protein Homology	CDS	1842630	1842818	.	+	0	ID=cds-WP_240365037.1;Parent=gene-PKHYL_RS09750;Dbxref=Genbank:WP_240365037.1;Name=WP_240365037.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014643.2;locus_tag=PKHYL_RS09750;product=type II toxin-antitoxin system prevent-host-death family antitoxin;protein_id=WP_240365037.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1842808	1843115	.	+	.	ID=gene-PKHYL_RS09755;Name=PKHYL_RS09755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09755;old_locus_tag=PKHYL_23810;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1842808	1843115	.	+	0	ID=cds-PKHYL_RS09755;Parent=gene-PKHYL_RS09755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443321.1;locus_tag=PKHYL_RS09755;product=type II toxin-antitoxin system mRNA interferase toxin%2C RelE/StbE family;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1843131	1843502	.	+	.	ID=gene-PKHYL_RS09760;Name=PKHYL_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09760;old_locus_tag=PKHYL_23820
NZ_AP019516.1	Protein Homology	CDS	1843131	1843502	.	+	0	ID=cds-WP_071001398.1;Parent=gene-PKHYL_RS09760;Dbxref=Genbank:WP_071001398.1;Name=WP_071001398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443320.1;locus_tag=PKHYL_RS09760;product=hypothetical protein;protein_id=WP_071001398.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1843590	1844723	.	+	.	ID=gene-PKHYL_RS09765;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=PKHYL_RS09765;old_locus_tag=PKHYL_23830
NZ_AP019516.1	Protein Homology	CDS	1843590	1844723	.	+	0	ID=cds-WP_071001397.1;Parent=gene-PKHYL_RS09765;Dbxref=Genbank:WP_071001397.1;Name=WP_071001397.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513454.1;locus_tag=PKHYL_RS09765;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_071001397.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1844860	1845093	.	+	.	ID=gene-PKHYL_RS09770;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=PKHYL_RS09770;old_locus_tag=PKHYL_23840
NZ_AP019516.1	Protein Homology	CDS	1844860	1845093	.	+	0	ID=cds-WP_240365038.1;Parent=gene-PKHYL_RS09770;Dbxref=Genbank:WP_240365038.1;Name=WP_240365038.1;Ontology_term=GO:0051537;gbkey=CDS;gene=yfaE;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395198.1;locus_tag=PKHYL_RS09770;product=class I ribonucleotide reductase maintenance protein YfaE;protein_id=WP_240365038.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1845253	1846290	.	-	.	ID=gene-PKHYL_RS09775;Name=PKHYL_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09775;old_locus_tag=PKHYL_23850
NZ_AP019516.1	Protein Homology	CDS	1845253	1846290	.	-	0	ID=cds-WP_240365039.1;Parent=gene-PKHYL_RS09775;Dbxref=Genbank:WP_240365039.1;Name=WP_240365039.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012318.2;locus_tag=PKHYL_RS09775;product=trypsin-like peptidase domain-containing protein;protein_id=WP_240365039.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1846977	1847811	.	+	.	ID=gene-PKHYL_RS09780;Name=PKHYL_RS09780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09780;old_locus_tag=PKHYL_23860;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1846977	1847811	.	+	0	ID=cds-PKHYL_RS09780;Parent=gene-PKHYL_RS09780;Note=frameshifted;Ontology_term=GO:0008150,GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960803.1;locus_tag=PKHYL_RS09780;product=Nif3-like dinuclear metal center hexameric protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1848819	1849436	.	+	.	ID=gene-PKHYL_RS09785;Name=PKHYL_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09785;old_locus_tag=PKHYL_23880
NZ_AP019516.1	GeneMarkS-2+	CDS	1848819	1849436	.	+	0	ID=cds-WP_240365040.1;Parent=gene-PKHYL_RS09785;Dbxref=Genbank:WP_240365040.1;Name=WP_240365040.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09785;product=hypothetical protein;protein_id=WP_240365040.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1849393	1850025	.	+	.	ID=gene-PKHYL_RS09790;Name=PKHYL_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09790;old_locus_tag=PKHYL_23890
NZ_AP019516.1	Protein Homology	CDS	1849393	1850025	.	+	0	ID=cds-WP_240365041.1;Parent=gene-PKHYL_RS09790;Dbxref=Genbank:WP_240365041.1;Name=WP_240365041.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013618.2;locus_tag=PKHYL_RS09790;product=transglycosylase SLT domain-containing protein;protein_id=WP_240365041.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1850026	1853072	.	-	.	ID=gene-PKHYL_RS17600;Name=PKHYL_RS17600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17600;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1850026	1853072	.	-	0	ID=cds-PKHYL_RS17600;Parent=gene-PKHYL_RS17600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513449.1;locus_tag=PKHYL_RS17600;product=LysM peptidoglycan-binding domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1853218	1853685	.	-	.	ID=gene-PKHYL_RS09820;Name=PKHYL_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09820;old_locus_tag=PKHYL_23930
NZ_AP019516.1	Protein Homology	CDS	1853218	1853685	.	-	0	ID=cds-WP_240365044.1;Parent=gene-PKHYL_RS09820;Dbxref=Genbank:WP_240365044.1;Name=WP_240365044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513448.1;locus_tag=PKHYL_RS09820;product=hypothetical protein;protein_id=WP_240365044.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1853986	1855152	.	-	.	ID=gene-PKHYL_RS09825;Name=PKHYL_RS09825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09825;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1853986	1855152	.	-	0	ID=cds-PKHYL_RS09825;Parent=gene-PKHYL_RS09825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198351.1;locus_tag=PKHYL_RS09825;product=hemolysin family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1855779	1856108	.	+	.	ID=gene-PKHYL_RS09830;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=PKHYL_RS09830;old_locus_tag=PKHYL_23960
NZ_AP019516.1	Protein Homology	CDS	1855779	1856108	.	+	0	ID=cds-WP_071001390.1;Parent=gene-PKHYL_RS09830;Dbxref=Genbank:WP_071001390.1;Name=WP_071001390.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051669.1;locus_tag=PKHYL_RS09830;product=preprotein translocase subunit YajC;protein_id=WP_071001390.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1856343	1858172	.	+	.	ID=gene-PKHYL_RS09835;Name=secD;end_range=1858172,.;gbkey=Gene;gene=secD;gene_biotype=pseudogene;locus_tag=PKHYL_RS09835;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1856343	1858172	.	+	0	ID=cds-PKHYL_RS09835;Parent=gene-PKHYL_RS09835;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0043952,GO:0015450,GO:0031522;end_range=1858172,.;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393749.1;locus_tag=PKHYL_RS09835;partial=true;product=protein translocase subunit SecD;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1858465	1859440	.	+	.	ID=gene-PKHYL_RS09840;Name=secF;gbkey=Gene;gene=secF;gene_biotype=pseudogene;locus_tag=PKHYL_RS09840;old_locus_tag=PKHYL_24010;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1858465	1859440	.	+	0	ID=cds-PKHYL_RS09840;Parent=gene-PKHYL_RS09840;Note=frameshifted;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393750.1;locus_tag=PKHYL_RS09840;product=protein translocase subunit SecF;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1859674	1859928	.	+	.	ID=gene-PKHYL_RS09845;Name=PKHYL_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09845;old_locus_tag=PKHYL_24020
NZ_AP019516.1	GeneMarkS-2+	CDS	1859674	1859928	.	+	0	ID=cds-WP_240365045.1;Parent=gene-PKHYL_RS09845;Dbxref=Genbank:WP_240365045.1;Name=WP_240365045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09845;product=hypothetical protein;protein_id=WP_240365045.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1860039	1860281	.	+	.	ID=gene-PKHYL_RS09850;Name=PKHYL_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09850;old_locus_tag=PKHYL_24030
NZ_AP019516.1	Protein Homology	CDS	1860039	1860281	.	+	0	ID=cds-WP_240365046.1;Parent=gene-PKHYL_RS09850;Dbxref=Genbank:WP_240365046.1;Name=WP_240365046.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013703.2;locus_tag=PKHYL_RS09850;product=MATE family efflux transporter;protein_id=WP_240365046.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1860427	1860660	.	+	.	ID=gene-PKHYL_RS09855;Name=PKHYL_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09855;old_locus_tag=PKHYL_24040
NZ_AP019516.1	GeneMarkS-2+	CDS	1860427	1860660	.	+	0	ID=cds-WP_240365047.1;Parent=gene-PKHYL_RS09855;Dbxref=Genbank:WP_240365047.1;Name=WP_240365047.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09855;product=hypothetical protein;protein_id=WP_240365047.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1860657	1860866	.	+	.	ID=gene-PKHYL_RS09860;Name=PKHYL_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09860;old_locus_tag=PKHYL_24050
NZ_AP019516.1	GeneMarkS-2+	CDS	1860657	1860866	.	+	0	ID=cds-WP_240365048.1;Parent=gene-PKHYL_RS09860;Dbxref=Genbank:WP_240365048.1;Name=WP_240365048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09860;product=hypothetical protein;protein_id=WP_240365048.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1860863	1861072	.	+	.	ID=gene-PKHYL_RS09865;Name=PKHYL_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09865
NZ_AP019516.1	GeneMarkS-2+	CDS	1860863	1861072	.	+	0	ID=cds-WP_240365049.1;Parent=gene-PKHYL_RS09865;Dbxref=Genbank:WP_240365049.1;Name=WP_240365049.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09865;product=hypothetical protein;protein_id=WP_240365049.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1861288	1861563	.	+	.	ID=gene-PKHYL_RS09870;Name=PKHYL_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09870;old_locus_tag=PKHYL_24060
NZ_AP019516.1	Protein Homology	CDS	1861288	1861563	.	+	0	ID=cds-WP_240365050.1;Parent=gene-PKHYL_RS09870;Dbxref=Genbank:WP_240365050.1;Name=WP_240365050.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015549.2;locus_tag=PKHYL_RS09870;product=AzlC family ABC transporter permease;protein_id=WP_240365050.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1861580	1861936	.	+	.	ID=gene-PKHYL_RS09875;Name=PKHYL_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09875;old_locus_tag=PKHYL_24070
NZ_AP019516.1	GeneMarkS-2+	CDS	1861580	1861936	.	+	0	ID=cds-WP_240365051.1;Parent=gene-PKHYL_RS09875;Dbxref=Genbank:WP_240365051.1;Name=WP_240365051.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09875;product=hypothetical protein;protein_id=WP_240365051.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1861926	1862278	.	+	.	ID=gene-PKHYL_RS09880;Name=PKHYL_RS09880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09880;old_locus_tag=PKHYL_24080;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1861926	1862278	.	+	0	ID=cds-PKHYL_RS09880;Parent=gene-PKHYL_RS09880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019674002.1;locus_tag=PKHYL_RS09880;product=AzlD domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1862404	1863939	.	-	.	ID=gene-PKHYL_RS09885;Name=purF;gbkey=Gene;gene=purF;gene_biotype=pseudogene;locus_tag=PKHYL_RS09885;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1862404	1863939	.	-	0	ID=cds-PKHYL_RS09885;Parent=gene-PKHYL_RS09885;Note=frameshifted;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003671055.1;locus_tag=PKHYL_RS09885;product=amidophosphoribosyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1864227	1864436	.	-	.	ID=gene-PKHYL_RS09890;Name=PKHYL_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09890;old_locus_tag=PKHYL_24140
NZ_AP019516.1	Protein Homology	CDS	1864227	1864436	.	-	0	ID=cds-WP_240366524.1;Parent=gene-PKHYL_RS09890;Dbxref=Genbank:WP_240366524.1;Name=WP_240366524.1;Ontology_term=GO:0009403,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: protein motif:HMM:NF014704.2;locus_tag=PKHYL_RS09890;product=CvpA family protein;protein_id=WP_240366524.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1864430	1864642	.	-	.	ID=gene-PKHYL_RS09895;Name=PKHYL_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09895;old_locus_tag=PKHYL_24150
NZ_AP019516.1	Protein Homology	CDS	1864430	1864642	.	-	0	ID=cds-WP_240365052.1;Parent=gene-PKHYL_RS09895;Dbxref=Genbank:WP_240365052.1;Name=WP_240365052.1;Ontology_term=GO:0009403,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: protein motif:HMM:NF014704.2;locus_tag=PKHYL_RS09895;product=CvpA family protein;protein_id=WP_240365052.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1864673	1865707	.	-	.	ID=gene-PKHYL_RS09900;Name=PKHYL_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09900;old_locus_tag=PKHYL_24160
NZ_AP019516.1	Protein Homology	CDS	1864673	1865707	.	-	0	ID=cds-WP_058024983.1;Parent=gene-PKHYL_RS09900;Dbxref=Genbank:WP_058024983.1;Name=WP_058024983.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280556.1;locus_tag=PKHYL_RS09900;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_058024983.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1865932	1866333	.	-	.	ID=gene-PKHYL_RS09905;Name=PKHYL_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09905;old_locus_tag=PKHYL_24170
NZ_AP019516.1	Protein Homology	CDS	1865932	1866333	.	-	0	ID=cds-WP_093070974.1;Parent=gene-PKHYL_RS09905;Dbxref=Genbank:WP_093070974.1;Name=WP_093070974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198328.1;locus_tag=PKHYL_RS09905;product=hypothetical protein;protein_id=WP_093070974.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1866615	1867184	.	-	.	ID=gene-PKHYL_RS09910;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=PKHYL_RS09910;old_locus_tag=PKHYL_24180
NZ_AP019516.1	Protein Homology	CDS	1866615	1867184	.	-	0	ID=cds-WP_071001383.1;Parent=gene-PKHYL_RS09910;Dbxref=Genbank:WP_071001383.1;Name=WP_071001383.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspM;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513436.1;locus_tag=PKHYL_RS09910;product=type II secretion system protein GspM;protein_id=WP_071001383.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1867218	1868513	.	-	.	ID=gene-PKHYL_RS09915;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=PKHYL_RS09915;old_locus_tag=PKHYL_24190
NZ_AP019516.1	Protein Homology	CDS	1867218	1868513	.	-	0	ID=cds-WP_071001382.1;Parent=gene-PKHYL_RS09915;Dbxref=Genbank:WP_071001382.1;Name=WP_071001382.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspL;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443303.1;locus_tag=PKHYL_RS09915;product=type II secretion system protein GspL;protein_id=WP_071001382.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1868674	1869132	.	-	.	ID=gene-PKHYL_RS09920;Name=PKHYL_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09920;old_locus_tag=PKHYL_24200
NZ_AP019516.1	Protein Homology	CDS	1868674	1869132	.	-	0	ID=cds-WP_058024979.1;Parent=gene-PKHYL_RS09920;Dbxref=Genbank:WP_058024979.1;Name=WP_058024979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280557.1;locus_tag=PKHYL_RS09920;product=histidine phosphatase family protein;protein_id=WP_058024979.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1869193	1870302	.	-	.	ID=gene-PKHYL_RS09925;Name=PKHYL_RS09925;end_range=1870302,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09925;old_locus_tag=PKHYL_24210;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1869193	1870302	.	-	0	ID=cds-PKHYL_RS09925;Parent=gene-PKHYL_RS09925;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1870302,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198318.1;locus_tag=PKHYL_RS09925;partial=true;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1870634	1871167	.	-	.	ID=gene-PKHYL_RS09930;Name=PKHYL_RS09930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09930;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1870634	1871167	.	-	0	ID=cds-PKHYL_RS09930;Parent=gene-PKHYL_RS09930;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013077.2;locus_tag=PKHYL_RS09930;product=nitroreductase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1871428	1872527	.	-	.	ID=gene-PKHYL_RS09935;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=pseudogene;locus_tag=PKHYL_RS09935;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1871428	1872527	.	-	0	ID=cds-PKHYL_RS09935;Parent=gene-PKHYL_RS09935;Note=frameshifted;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198312.1;locus_tag=PKHYL_RS09935;product=cell division protein ZapE;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1872618	1873267	.	-	.	ID=gene-PKHYL_RS09940;Name=PKHYL_RS09940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09940;old_locus_tag=PKHYL_24260;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1872618	1873267	.	-	0	ID=cds-PKHYL_RS09940;Parent=gene-PKHYL_RS09940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518925.1;locus_tag=PKHYL_RS09940;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1873558	1873926	.	+	.	ID=gene-PKHYL_RS09945;Name=PKHYL_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09945;old_locus_tag=PKHYL_24270
NZ_AP019516.1	Protein Homology	CDS	1873558	1873926	.	+	0	ID=cds-WP_071001377.1;Parent=gene-PKHYL_RS09945;Dbxref=Genbank:WP_071001377.1;Name=WP_071001377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513429.1;locus_tag=PKHYL_RS09945;product=hypothetical protein;protein_id=WP_071001377.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1874154	1875686	.	+	.	ID=gene-PKHYL_RS09950;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=PKHYL_RS09950;old_locus_tag=PKHYL_24280
NZ_AP019516.1	Protein Homology	CDS	1874154	1875686	.	+	0	ID=cds-WP_240365053.1;Parent=gene-PKHYL_RS09950;Dbxref=Genbank:WP_240365053.1;Name=WP_240365053.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: protein motif:HMM:TIGR00237.1;locus_tag=PKHYL_RS09950;product=exodeoxyribonuclease VII large subunit;protein_id=WP_240365053.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1875745	1875990	.	+	.	ID=gene-PKHYL_RS09955;Name=PKHYL_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09955;old_locus_tag=PKHYL_24290
NZ_AP019516.1	Protein Homology	CDS	1875745	1875990	.	+	0	ID=cds-WP_071001376.1;Parent=gene-PKHYL_RS09955;Dbxref=Genbank:WP_071001376.1;Name=WP_071001376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443296.1;locus_tag=PKHYL_RS09955;product=exodeoxyribonuclease VII;protein_id=WP_071001376.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1875992	1877217	.	-	.	ID=gene-PKHYL_RS09960;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=pseudogene;locus_tag=PKHYL_RS09960;old_locus_tag=PKHYL_24300;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1875992	1877217	.	-	0	ID=cds-PKHYL_RS09960;Parent=gene-PKHYL_RS09960;Note=frameshifted;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198300.1;locus_tag=PKHYL_RS09960;product=nicotinate phosphoribosyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1877513	1879209	.	-	.	ID=gene-PKHYL_RS09965;Name=msrAB;gbkey=Gene;gene=msrAB;gene_biotype=pseudogene;locus_tag=PKHYL_RS09965;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1877513	1879209	.	-	0	ID=cds-PKHYL_RS09965;Parent=gene-PKHYL_RS09965;Note=frameshifted;gbkey=CDS;gene=msrAB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019518887.1;locus_tag=PKHYL_RS09965;product=bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1879575	1880468	.	-	.	ID=gene-PKHYL_RS09970;Name=PKHYL_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09970;old_locus_tag=PKHYL_24350
NZ_AP019516.1	Protein Homology	CDS	1879575	1880468	.	-	0	ID=cds-WP_071001373.1;Parent=gene-PKHYL_RS09970;Dbxref=Genbank:WP_071001373.1;Name=WP_071001373.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198297.1;locus_tag=PKHYL_RS09970;product=ATP-binding cassette domain-containing protein;protein_id=WP_071001373.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1880532	1880891	.	-	.	ID=gene-PKHYL_RS09975;Name=PKHYL_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09975;old_locus_tag=PKHYL_24360
NZ_AP019516.1	Protein Homology	CDS	1880532	1880891	.	-	0	ID=cds-WP_240365054.1;Parent=gene-PKHYL_RS09975;Dbxref=Genbank:WP_240365054.1;Name=WP_240365054.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012738.2;locus_tag=PKHYL_RS09975;product=ABC transporter permease subunit;protein_id=WP_240365054.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1880906	1881595	.	-	.	ID=gene-PKHYL_RS09980;Name=PKHYL_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09980;old_locus_tag=PKHYL_24370
NZ_AP019516.1	GeneMarkS-2+	CDS	1880906	1881595	.	-	0	ID=cds-WP_240365055.1;Parent=gene-PKHYL_RS09980;Dbxref=Genbank:WP_240365055.1;Name=WP_240365055.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09980;product=hypothetical protein;protein_id=WP_240365055.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1881613	1882458	.	-	.	ID=gene-PKHYL_RS09985;Name=PKHYL_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09985;old_locus_tag=PKHYL_24380
NZ_AP019516.1	Protein Homology	CDS	1881613	1882458	.	-	0	ID=cds-WP_240365056.1;Parent=gene-PKHYL_RS09985;Dbxref=Genbank:WP_240365056.1;Name=WP_240365056.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015995.2;locus_tag=PKHYL_RS09985;product=ABC transporter substrate-binding protein;protein_id=WP_240365056.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1882804	1883859	.	-	.	ID=gene-PKHYL_RS09990;Name=PKHYL_RS09990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS09990;old_locus_tag=PKHYL_24390;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1882804	1883859	.	-	0	ID=cds-PKHYL_RS09990;Parent=gene-PKHYL_RS09990;Note=internal stop;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012398.2;locus_tag=PKHYL_RS09990;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1883894	1884223	.	-	.	ID=gene-PKHYL_RS09995;Name=PKHYL_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS09995;old_locus_tag=PKHYL_24410
NZ_AP019516.1	GeneMarkS-2+	CDS	1883894	1884223	.	-	0	ID=cds-WP_240365057.1;Parent=gene-PKHYL_RS09995;Dbxref=Genbank:WP_240365057.1;Name=WP_240365057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS09995;product=hypothetical protein;protein_id=WP_240365057.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1884714	1885540	.	+	.	ID=gene-PKHYL_RS10000;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=pseudogene;locus_tag=PKHYL_RS10000;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1884714	1885540	.	+	0	ID=cds-PKHYL_RS10000;Parent=gene-PKHYL_RS10000;Note=frameshifted;Ontology_term=GO:0009107,GO:0016979;gbkey=CDS;gene=lipB;go_function=lipoate-protein ligase activity|0016979||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513421.1;locus_tag=PKHYL_RS10000;product=lipoyl(octanoyl) transferase LipB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1885729	1886258	.	+	.	ID=gene-PKHYL_RS10005;Name=PKHYL_RS10005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10005;old_locus_tag=PKHYL_24440;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1885729	1886258	.	+	0	ID=cds-PKHYL_RS10005;Parent=gene-PKHYL_RS10005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198287.1;locus_tag=PKHYL_RS10005;product=inorganic diphosphatase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1886494	1886673	.	+	.	ID=gene-PKHYL_RS10010;Name=PKHYL_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10010;old_locus_tag=PKHYL_24450
NZ_AP019516.1	GeneMarkS-2+	CDS	1886494	1886673	.	+	0	ID=cds-WP_240365058.1;Parent=gene-PKHYL_RS10010;Dbxref=Genbank:WP_240365058.1;Name=WP_240365058.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10010;product=hypothetical protein;protein_id=WP_240365058.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1887116	1887688	.	-	.	ID=gene-PKHYL_RS10015;Name=PKHYL_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10015;old_locus_tag=PKHYL_24460
NZ_AP019516.1	Protein Homology	CDS	1887116	1887688	.	-	0	ID=cds-WP_240365059.1;Parent=gene-PKHYL_RS10015;Dbxref=Genbank:WP_240365059.1;Name=WP_240365059.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=PKHYL_RS10015;product=MFS transporter;protein_id=WP_240365059.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1887706	1888083	.	-	.	ID=gene-PKHYL_RS10020;Name=PKHYL_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10020;old_locus_tag=PKHYL_24470
NZ_AP019516.1	GeneMarkS-2+	CDS	1887706	1888083	.	-	0	ID=cds-WP_240365060.1;Parent=gene-PKHYL_RS10020;Dbxref=Genbank:WP_240365060.1;Name=WP_240365060.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10020;product=hypothetical protein;protein_id=WP_240365060.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1888061	1888333	.	-	.	ID=gene-PKHYL_RS10025;Name=PKHYL_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10025;old_locus_tag=PKHYL_24480
NZ_AP019516.1	GeneMarkS-2+	CDS	1888061	1888333	.	-	0	ID=cds-WP_240365061.1;Parent=gene-PKHYL_RS10025;Dbxref=Genbank:WP_240365061.1;Name=WP_240365061.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10025;product=hypothetical protein;protein_id=WP_240365061.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1888485	1889141	.	-	.	ID=gene-PKHYL_RS10030;Name=PKHYL_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10030;old_locus_tag=PKHYL_24490
NZ_AP019516.1	Protein Homology	CDS	1888485	1889141	.	-	0	ID=cds-WP_240365062.1;Parent=gene-PKHYL_RS10030;Dbxref=Genbank:WP_240365062.1;Name=WP_240365062.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: protein motif:HMM:TIGR01891.1;locus_tag=PKHYL_RS10030;product=amidohydrolase;protein_id=WP_240365062.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1889131	1889565	.	-	.	ID=gene-PKHYL_RS10035;Name=PKHYL_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10035;old_locus_tag=PKHYL_24500
NZ_AP019516.1	Protein Homology	CDS	1889131	1889565	.	-	0	ID=cds-WP_240365063.1;Parent=gene-PKHYL_RS10035;Dbxref=Genbank:WP_240365063.1;Name=WP_240365063.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF013696.2;locus_tag=PKHYL_RS10035;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_240365063.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1889576	1890049	.	-	.	ID=gene-PKHYL_RS10040;Name=PKHYL_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10040;old_locus_tag=PKHYL_24510
NZ_AP019516.1	Protein Homology	CDS	1889576	1890049	.	-	0	ID=cds-WP_240366525.1;Parent=gene-PKHYL_RS10040;Dbxref=Genbank:WP_240366525.1;Name=WP_240366525.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012512.2;locus_tag=PKHYL_RS10040;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_240366525.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1889976	1890620	.	-	.	ID=gene-PKHYL_RS10045;Name=PKHYL_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10045;old_locus_tag=PKHYL_24520
NZ_AP019516.1	Protein Homology	CDS	1889976	1890620	.	-	0	ID=cds-WP_240365064.1;Parent=gene-PKHYL_RS10045;Dbxref=Genbank:WP_240365064.1;Name=WP_240365064.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012512.2;locus_tag=PKHYL_RS10045;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_240365064.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1890856	1891782	.	+	.	ID=gene-PKHYL_RS10050;Name=PKHYL_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10050;old_locus_tag=PKHYL_24530
NZ_AP019516.1	Protein Homology	CDS	1890856	1891782	.	+	0	ID=cds-WP_025643743.1;Parent=gene-PKHYL_RS10050;Dbxref=Genbank:WP_025643743.1;Name=WP_025643743.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=PKHYL_RS10050;product=IS30 family transposase;protein_id=WP_025643743.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1891850	1892344	.	-	.	ID=gene-PKHYL_RS10055;Name=PKHYL_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10055;old_locus_tag=PKHYL_24540
NZ_AP019516.1	Protein Homology	CDS	1891850	1892344	.	-	0	ID=cds-WP_240365065.1;Parent=gene-PKHYL_RS10055;Dbxref=Genbank:WP_240365065.1;Name=WP_240365065.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF013696.2;locus_tag=PKHYL_RS10055;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_240365065.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1892364	1892630	.	-	.	ID=gene-PKHYL_RS10060;Name=PKHYL_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10060;old_locus_tag=PKHYL_24550
NZ_AP019516.1	GeneMarkS-2+	CDS	1892364	1892630	.	-	0	ID=cds-WP_240366571.1;Parent=gene-PKHYL_RS10060;Dbxref=Genbank:WP_240366571.1;Name=WP_240366571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10060;product=hypothetical protein;protein_id=WP_240366571.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1892590	1893093	.	-	.	ID=gene-PKHYL_RS10065;Name=PKHYL_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10065;old_locus_tag=PKHYL_24560
NZ_AP019516.1	Protein Homology	CDS	1892590	1893093	.	-	0	ID=cds-WP_240365066.1;Parent=gene-PKHYL_RS10065;Dbxref=Genbank:WP_240365066.1;Name=WP_240365066.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF016289.2;locus_tag=PKHYL_RS10065;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_240365066.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1893474	1893842	.	+	.	ID=gene-PKHYL_RS10070;Name=PKHYL_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10070;old_locus_tag=PKHYL_24570
NZ_AP019516.1	Protein Homology	CDS	1893474	1893842	.	+	0	ID=cds-WP_240365067.1;Parent=gene-PKHYL_RS10070;Dbxref=Genbank:WP_240365067.1;Name=WP_240365067.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013224.2;locus_tag=PKHYL_RS10070;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_240365067.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1894075	1894212	.	+	.	ID=gene-PKHYL_RS10075;Name=PKHYL_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10075;old_locus_tag=PKHYL_24580
NZ_AP019516.1	GeneMarkS-2+	CDS	1894075	1894212	.	+	0	ID=cds-WP_201568295.1;Parent=gene-PKHYL_RS10075;Dbxref=Genbank:WP_201568295.1;Name=WP_201568295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10075;product=hypothetical protein;protein_id=WP_201568295.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1894620	1895455	.	-	.	ID=gene-PKHYL_RS10080;Name=PKHYL_RS10080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10080;old_locus_tag=PKHYL_24590;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1894620	1895455	.	-	0	ID=cds-PKHYL_RS10080;Parent=gene-PKHYL_RS10080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443284.1;locus_tag=PKHYL_RS10080;product=SDR family NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1895706	1896113	.	+	.	ID=gene-PKHYL_RS10085;Name=PKHYL_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10085;old_locus_tag=PKHYL_24600
NZ_AP019516.1	Protein Homology	CDS	1895706	1896113	.	+	0	ID=cds-WP_240365068.1;Parent=gene-PKHYL_RS10085;Dbxref=Genbank:WP_240365068.1;Name=WP_240365068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198245.1;locus_tag=PKHYL_RS10085;product=DUF1622 domain-containing protein;protein_id=WP_240365068.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1896141	1897222	.	-	.	ID=gene-PKHYL_RS10090;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=pseudogene;locus_tag=PKHYL_RS10090;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1896141	1897222	.	-	0	ID=cds-PKHYL_RS10090;Parent=gene-PKHYL_RS10090;Note=frameshifted;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513415.1;locus_tag=PKHYL_RS10090;product=tRNA dihydrouridine synthase DusB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1897344	1898132	.	-	.	ID=gene-PKHYL_RS10095;Name=PKHYL_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10095;old_locus_tag=PKHYL_24630
NZ_AP019516.1	Protein Homology	CDS	1897344	1898132	.	-	0	ID=cds-WP_240365069.1;Parent=gene-PKHYL_RS10095;Dbxref=Genbank:WP_240365069.1;Name=WP_240365069.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: protein motif:HMM:NF014126.2;locus_tag=PKHYL_RS10095;product=BCCT family transporter;protein_id=WP_240365069.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1898129	1898530	.	-	.	ID=gene-PKHYL_RS10100;Name=PKHYL_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10100;old_locus_tag=PKHYL_24640
NZ_AP019516.1	Protein Homology	CDS	1898129	1898530	.	-	0	ID=cds-WP_240365070.1;Parent=gene-PKHYL_RS10100;Dbxref=Genbank:WP_240365070.1;Name=WP_240365070.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: protein motif:HMM:NF014126.2;locus_tag=PKHYL_RS10100;product=BCCT family transporter;protein_id=WP_240365070.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1898514	1899227	.	-	.	ID=gene-PKHYL_RS10105;Name=PKHYL_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10105;old_locus_tag=PKHYL_24650
NZ_AP019516.1	Protein Homology	CDS	1898514	1899227	.	-	0	ID=cds-WP_240365071.1;Parent=gene-PKHYL_RS10105;Dbxref=Genbank:WP_240365071.1;Name=WP_240365071.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: protein motif:HMM:NF014126.2;locus_tag=PKHYL_RS10105;product=BCCT family transporter;protein_id=WP_240365071.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1899148	1899390	.	-	.	ID=gene-PKHYL_RS10110;Name=PKHYL_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10110
NZ_AP019516.1	GeneMarkS-2+	CDS	1899148	1899390	.	-	0	ID=cds-WP_240365072.1;Parent=gene-PKHYL_RS10110;Dbxref=Genbank:WP_240365072.1;Name=WP_240365072.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10110;product=hypothetical protein;protein_id=WP_240365072.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1899709	1900151	.	-	.	ID=gene-PKHYL_RS10115;Name=PKHYL_RS10115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10115;old_locus_tag=PKHYL_24670;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1899709	1900151	.	-	0	ID=cds-PKHYL_RS10115;Parent=gene-PKHYL_RS10115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443281.1;locus_tag=PKHYL_RS10115;product=HIT family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1900376	1900621	.	+	.	ID=gene-PKHYL_RS10120;Name=PKHYL_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10120;old_locus_tag=PKHYL_24680
NZ_AP019516.1	GeneMarkS-2+	CDS	1900376	1900621	.	+	0	ID=cds-WP_240365073.1;Parent=gene-PKHYL_RS10120;Dbxref=Genbank:WP_240365073.1;Name=WP_240365073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10120;product=hypothetical protein;protein_id=WP_240365073.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1900585	1901130	.	+	.	ID=gene-PKHYL_RS10125;Name=PKHYL_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10125;old_locus_tag=PKHYL_24690
NZ_AP019516.1	GeneMarkS-2+	CDS	1900585	1901130	.	+	0	ID=cds-WP_240365074.1;Parent=gene-PKHYL_RS10125;Dbxref=Genbank:WP_240365074.1;Name=WP_240365074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10125;product=hypothetical protein;protein_id=WP_240365074.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1901324	1903209	.	+	.	ID=gene-PKHYL_RS10130;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=pseudogene;locus_tag=PKHYL_RS10130;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1901324	1903209	.	+	0	ID=cds-PKHYL_RS10130;Parent=gene-PKHYL_RS10130;Note=frameshifted;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280576.1;locus_tag=PKHYL_RS10130;product=dihydroxy-acid dehydratase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1903465	1903998	.	+	.	ID=gene-PKHYL_RS17605;Name=PKHYL_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17605;old_locus_tag=PKHYL_24720
NZ_AP019516.1	Protein Homology	CDS	1903465	1903998	.	+	0	ID=cds-WP_269778151.1;Parent=gene-PKHYL_RS17605;Dbxref=Genbank:WP_269778151.1;Name=WP_269778151.1;Ontology_term=GO:0006812,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013188.2;locus_tag=PKHYL_RS17605;product=cation:proton antiporter;protein_id=WP_269778151.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1903967	1904710	.	+	.	ID=gene-PKHYL_RS17610;Name=PKHYL_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17610;old_locus_tag=PKHYL_24730
NZ_AP019516.1	Protein Homology	CDS	1903967	1904710	.	+	0	ID=cds-WP_269778152.1;Parent=gene-PKHYL_RS17610;Dbxref=Genbank:WP_269778152.1;Name=WP_269778152.1;Ontology_term=GO:0006812,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013188.2;locus_tag=PKHYL_RS17610;product=cation:proton antiporter;protein_id=WP_269778152.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1904767	1906158	.	-	.	ID=gene-PKHYL_RS10140;Name=PKHYL_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10140;old_locus_tag=PKHYL_24740
NZ_AP019516.1	Protein Homology	CDS	1904767	1906158	.	-	0	ID=cds-WP_071003574.1;Parent=gene-PKHYL_RS10140;Dbxref=Genbank:WP_071003574.1;Name=WP_071003574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393608.1;locus_tag=PKHYL_RS10140;product=serine hydrolase domain-containing protein;protein_id=WP_071003574.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1906361	1906885	.	-	.	ID=gene-PKHYL_RS10145;Name=PKHYL_RS10145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10145;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1906361	1906885	.	-	0	ID=cds-PKHYL_RS10145;Parent=gene-PKHYL_RS10145;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513408.1;locus_tag=PKHYL_RS10145;product=sulfur transferase domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1907015	1907927	.	-	.	ID=gene-PKHYL_RS10150;Name=PKHYL_RS10150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10150;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1907015	1907927	.	-	0	ID=cds-PKHYL_RS10150;Parent=gene-PKHYL_RS10150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198211.1;locus_tag=PKHYL_RS10150;product=MaoC/PaaZ C-terminal domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1908233	1909634	.	-	.	ID=gene-PKHYL_RS10155;Name=PKHYL_RS10155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10155;old_locus_tag=PKHYL_24800;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1908233	1909634	.	-	0	ID=cds-PKHYL_RS10155;Parent=gene-PKHYL_RS10155;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005240885.1;locus_tag=PKHYL_RS10155;product=3-oxoacyl-ACP reductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1910203	1911826	.	+	.	ID=gene-PKHYL_RS10160;Name=PKHYL_RS10160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10160;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1910203	1911826	.	+	0	ID=cds-PKHYL_RS10160;Parent=gene-PKHYL_RS10160;Note=frameshifted;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198207.1;locus_tag=PKHYL_RS10160;product=acetyl-CoA C-acetyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1912056	1912541	.	+	.	ID=gene-PKHYL_RS17615;Name=PKHYL_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17615;old_locus_tag=PKHYL_24850
NZ_AP019516.1	Protein Homology	CDS	1912056	1912541	.	+	0	ID=cds-WP_269778153.1;Parent=gene-PKHYL_RS17615;Dbxref=Genbank:WP_269778153.1;Name=WP_269778153.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015909.2;locus_tag=PKHYL_RS17615;product=hypothetical protein;protein_id=WP_269778153.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1912513	1913105	.	+	.	ID=gene-PKHYL_RS10165;Name=PKHYL_RS10165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10165;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1912513	1913105	.	+	0	ID=cds-PKHYL_RS10165;Parent=gene-PKHYL_RS10165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015909.2;locus_tag=PKHYL_RS10165;product=hypothetical protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1913229	1913474	.	-	.	ID=gene-PKHYL_RS10170;Name=PKHYL_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10170;old_locus_tag=PKHYL_24870
NZ_AP019516.1	GeneMarkS-2+	CDS	1913229	1913474	.	-	0	ID=cds-WP_240365075.1;Parent=gene-PKHYL_RS10170;Dbxref=Genbank:WP_240365075.1;Name=WP_240365075.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10170;product=pilus assembly protein PilZ;protein_id=WP_240365075.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1913694	1914825	.	-	.	ID=gene-PKHYL_RS10175;Name=PKHYL_RS10175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10175;old_locus_tag=PKHYL_24880;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1913694	1914825	.	-	0	ID=cds-PKHYL_RS10175;Parent=gene-PKHYL_RS10175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198202.1;locus_tag=PKHYL_RS10175;product=DNA polymerase III subunit delta';pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1914912	1915724	.	-	.	ID=gene-PKHYL_RS10180;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=PKHYL_RS10180;old_locus_tag=PKHYL_24900
NZ_AP019516.1	Protein Homology	CDS	1914912	1915724	.	-	0	ID=cds-WP_071001357.1;Parent=gene-PKHYL_RS10180;Dbxref=Genbank:WP_071001357.1;Name=WP_071001357.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198200.1;locus_tag=PKHYL_RS10180;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_071001357.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1915770	1916903	.	-	.	ID=gene-PKHYL_RS10185;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=pseudogene;locus_tag=PKHYL_RS10185;old_locus_tag=PKHYL_24920;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1915770	1916903	.	-	0	ID=cds-PKHYL_RS10185;Parent=gene-PKHYL_RS10185;Note=frameshifted;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005009005.1;locus_tag=PKHYL_RS10185;product=tetraacyldisaccharide 4'-kinase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1916970	1918758	.	-	.	ID=gene-PKHYL_RS10190;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=pseudogene;locus_tag=PKHYL_RS10190;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1916970	1918758	.	-	0	ID=cds-PKHYL_RS10190;Parent=gene-PKHYL_RS10190;Note=frameshifted;Ontology_term=GO:0006869,GO:0005319;gbkey=CDS;gene=msbA;go_function=lipid transporter activity|0005319||IEA;go_process=lipid transport|0006869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198196.1;locus_tag=PKHYL_RS10190;product=lipid A export permease/ATP-binding protein MsbA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1918835	1919266	.	-	.	ID=gene-PKHYL_RS10195;Name=PKHYL_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10195;old_locus_tag=PKHYL_24950
NZ_AP019516.1	Protein Homology	CDS	1918835	1919266	.	-	0	ID=cds-WP_058024949.1;Parent=gene-PKHYL_RS10195;Dbxref=Genbank:WP_058024949.1;Name=WP_058024949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443268.1;locus_tag=PKHYL_RS10195;product=biopolymer transporter ExbD;protein_id=WP_058024949.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1919339	1920051	.	-	.	ID=gene-PKHYL_RS10200;Name=PKHYL_RS10200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10200;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1919339	1920051	.	-	0	ID=cds-PKHYL_RS10200;Parent=gene-PKHYL_RS10200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513397.1;locus_tag=PKHYL_RS10200;product=MotA/TolQ/ExbB proton channel family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1920217	1921296	.	-	.	ID=gene-PKHYL_RS10205;Name=PKHYL_RS10205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10205;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1920217	1921296	.	-	0	ID=cds-PKHYL_RS10205;Parent=gene-PKHYL_RS10205;Note=frameshifted%3B internal stop;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198187.1;locus_tag=PKHYL_RS10205;product=ParB/RepB/Spo0J family partition protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1921401	1922181	.	-	.	ID=gene-PKHYL_RS10210;Name=PKHYL_RS10210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10210;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1921401	1922181	.	-	0	ID=cds-PKHYL_RS10210;Parent=gene-PKHYL_RS10210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280592.1;locus_tag=PKHYL_RS10210;product=ParA family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1922441	1923156	.	-	.	ID=gene-PKHYL_RS10215;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=pseudogene;locus_tag=PKHYL_RS10215;old_locus_tag=PKHYL_25040;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1922441	1923156	.	-	0	ID=cds-PKHYL_RS10215;Parent=gene-PKHYL_RS10215;Note=frameshifted;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443264.1;locus_tag=PKHYL_RS10215;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1923507	1926289	.	+	.	ID=gene-PKHYL_RS10220;Name=PKHYL_RS10220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10220;old_locus_tag=PKHYL_25060;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1923507	1926289	.	+	0	ID=cds-PKHYL_RS10220;Parent=gene-PKHYL_RS10220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198182.1;locus_tag=PKHYL_RS10220;product=ATP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1926473	1927599	.	+	.	ID=gene-PKHYL_RS10225;Name=PKHYL_RS10225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10225;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1926473	1927599	.	+	0	ID=cds-PKHYL_RS10225;Parent=gene-PKHYL_RS10225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443262.1;locus_tag=PKHYL_RS10225;product=WYL domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1927705	1928067	.	+	.	ID=gene-PKHYL_RS10230;Name=PKHYL_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10230;old_locus_tag=PKHYL_25100
NZ_AP019516.1	Protein Homology	CDS	1927705	1928067	.	+	0	ID=cds-WP_240365076.1;Parent=gene-PKHYL_RS10230;Dbxref=Genbank:WP_240365076.1;Name=WP_240365076.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014404.2;locus_tag=PKHYL_RS10230;product=TerD family protein;protein_id=WP_240365076.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1928169	1928300	.	+	.	ID=gene-PKHYL_RS17620;Name=PKHYL_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17620
NZ_AP019516.1	GeneMarkS-2+	CDS	1928169	1928300	.	+	0	ID=cds-WP_269778154.1;Parent=gene-PKHYL_RS17620;Dbxref=Genbank:WP_269778154.1;Name=WP_269778154.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17620;product=hypothetical protein;protein_id=WP_269778154.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1928410	1929415	.	-	.	ID=gene-PKHYL_RS10235;Name=PKHYL_RS10235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10235;old_locus_tag=PKHYL_25110;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1928410	1929415	.	-	0	ID=cds-PKHYL_RS10235;Parent=gene-PKHYL_RS10235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004962361.1;locus_tag=PKHYL_RS10235;product=ion transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1929724	1929951	.	-	.	ID=gene-PKHYL_RS10240;Name=PKHYL_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10240
NZ_AP019516.1	GeneMarkS-2+	CDS	1929724	1929951	.	-	0	ID=cds-WP_143007428.1;Parent=gene-PKHYL_RS10240;Dbxref=Genbank:WP_143007428.1;Name=WP_143007428.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10240;product=hypothetical protein;protein_id=WP_143007428.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1930436	1931062	.	+	.	ID=gene-PKHYL_RS10245;Name=PKHYL_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10245;old_locus_tag=PKHYL_25120
NZ_AP019516.1	Protein Homology	CDS	1930436	1931062	.	+	0	ID=cds-WP_071001346.1;Parent=gene-PKHYL_RS10245;Dbxref=Genbank:WP_071001346.1;Name=WP_071001346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443259.1;locus_tag=PKHYL_RS10245;product=outer membrane beta-barrel protein;protein_id=WP_071001346.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1931224	1931840	.	-	.	ID=gene-PKHYL_RS10250;Name=PKHYL_RS10250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10250;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1931224	1931840	.	-	0	ID=cds-PKHYL_RS10250;Parent=gene-PKHYL_RS10250;Note=frameshifted;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF012424.2;locus_tag=PKHYL_RS10250;product=2-oxo acid dehydrogenase subunit E2;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1931864	1932865	.	-	.	ID=gene-PKHYL_RS10255;Name=PKHYL_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10255;old_locus_tag=PKHYL_25150
NZ_AP019516.1	Protein Homology	CDS	1931864	1932865	.	-	0	ID=cds-WP_240365077.1;Parent=gene-PKHYL_RS10255;Dbxref=Genbank:WP_240365077.1;Name=WP_240365077.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF012584.2;locus_tag=PKHYL_RS10255;product=E3 binding domain-containing protein;protein_id=WP_240365077.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1932944	1935748	.	-	.	ID=gene-PKHYL_RS10260;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=pseudogene;locus_tag=PKHYL_RS10260;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1932944	1935748	.	-	0	ID=cds-PKHYL_RS10260;Parent=gene-PKHYL_RS10260;Note=frameshifted;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198169.1;locus_tag=PKHYL_RS10260;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1936349	1938307	.	+	.	ID=gene-PKHYL_RS10265;Name=PKHYL_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10265;old_locus_tag=PKHYL_25220
NZ_AP019516.1	GeneMarkS-2+	CDS	1936349	1938307	.	+	0	ID=cds-WP_240365078.1;Parent=gene-PKHYL_RS10265;Dbxref=Genbank:WP_240365078.1;Name=WP_240365078.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10265;product=hypothetical protein;protein_id=WP_240365078.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1938628	1939092	.	+	.	ID=gene-PKHYL_RS10270;Name=PKHYL_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10270;old_locus_tag=PKHYL_25230
NZ_AP019516.1	Protein Homology	CDS	1938628	1939092	.	+	0	ID=cds-WP_093070858.1;Parent=gene-PKHYL_RS10270;Dbxref=Genbank:WP_093070858.1;Name=WP_093070858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513385.1;locus_tag=PKHYL_RS10270;product=hypothetical protein;protein_id=WP_093070858.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1939159	1941264	.	+	.	ID=gene-PKHYL_RS10275;Name=PKHYL_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10275;old_locus_tag=PKHYL_25240
NZ_AP019516.1	Protein Homology	CDS	1939159	1941264	.	+	0	ID=cds-WP_240365079.1;Parent=gene-PKHYL_RS10275;Dbxref=Genbank:WP_240365079.1;Name=WP_240365079.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013508.2;locus_tag=PKHYL_RS10275;product=hypothetical protein;protein_id=WP_240365079.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1941404	1941688	.	+	.	ID=gene-PKHYL_RS10280;Name=PKHYL_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10280;old_locus_tag=PKHYL_25250
NZ_AP019516.1	GeneMarkS-2+	CDS	1941404	1941688	.	+	0	ID=cds-WP_240365080.1;Parent=gene-PKHYL_RS10280;Dbxref=Genbank:WP_240365080.1;Name=WP_240365080.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10280;product=hypothetical protein;protein_id=WP_240365080.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1941685	1941939	.	+	.	ID=gene-PKHYL_RS10285;Name=PKHYL_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10285;old_locus_tag=PKHYL_25260
NZ_AP019516.1	GeneMarkS-2+	CDS	1941685	1941939	.	+	0	ID=cds-WP_240365081.1;Parent=gene-PKHYL_RS10285;Dbxref=Genbank:WP_240365081.1;Name=WP_240365081.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10285;product=hypothetical protein;protein_id=WP_240365081.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1941914	1946740	.	+	.	ID=gene-PKHYL_RS10290;Name=PKHYL_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10290;old_locus_tag=PKHYL_25270
NZ_AP019516.1	Protein Homology	CDS	1941914	1946740	.	+	0	ID=cds-WP_240365082.1;Parent=gene-PKHYL_RS10290;Dbxref=Genbank:WP_240365082.1;Name=WP_240365082.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013508.2;locus_tag=PKHYL_RS10290;product=hypothetical protein;protein_id=WP_240365082.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1946864	1947649	.	+	.	ID=gene-PKHYL_RS10295;Name=PKHYL_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10295;old_locus_tag=PKHYL_25280
NZ_AP019516.1	Protein Homology	CDS	1946864	1947649	.	+	0	ID=cds-WP_093070864.1;Parent=gene-PKHYL_RS10295;Dbxref=Genbank:WP_093070864.1;Name=WP_093070864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198160.1;locus_tag=PKHYL_RS10295;product=hypothetical protein;protein_id=WP_093070864.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1947720	1948409	.	-	.	ID=gene-PKHYL_RS10300;Name=PKHYL_RS10300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10300;old_locus_tag=PKHYL_25290;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1947720	1948409	.	-	0	ID=cds-PKHYL_RS10300;Parent=gene-PKHYL_RS10300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513381.1;locus_tag=PKHYL_RS10300;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1948647	1948856	.	-	.	ID=gene-PKHYL_RS10305;Name=PKHYL_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10305;old_locus_tag=PKHYL_25300
NZ_AP019516.1	GeneMarkS-2+	CDS	1948647	1948856	.	-	0	ID=cds-WP_240365083.1;Parent=gene-PKHYL_RS10305;Dbxref=Genbank:WP_240365083.1;Name=WP_240365083.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10305;product=hypothetical protein;protein_id=WP_240365083.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1948853	1949116	.	-	.	ID=gene-PKHYL_RS10310;Name=PKHYL_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10310;old_locus_tag=PKHYL_25310
NZ_AP019516.1	GeneMarkS-2+	CDS	1948853	1949116	.	-	0	ID=cds-WP_240365084.1;Parent=gene-PKHYL_RS10310;Dbxref=Genbank:WP_240365084.1;Name=WP_240365084.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10310;product=hypothetical protein;protein_id=WP_240365084.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1949163	1949666	.	-	.	ID=gene-PKHYL_RS10315;Name=PKHYL_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10315;old_locus_tag=PKHYL_25320
NZ_AP019516.1	GeneMarkS-2+	CDS	1949163	1949666	.	-	0	ID=cds-WP_240365085.1;Parent=gene-PKHYL_RS10315;Dbxref=Genbank:WP_240365085.1;Name=WP_240365085.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10315;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_240365085.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1949966	1950478	.	-	.	ID=gene-PKHYL_RS10320;Name=PKHYL_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10320;old_locus_tag=PKHYL_25330
NZ_AP019516.1	Protein Homology	CDS	1949966	1950478	.	-	0	ID=cds-WP_071001334.1;Parent=gene-PKHYL_RS10320;Dbxref=Genbank:WP_071001334.1;Name=WP_071001334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198152.1;locus_tag=PKHYL_RS10320;product=hypothetical protein;protein_id=WP_071001334.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1950727	1952334	.	-	.	ID=gene-PKHYL_RS10325;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=pseudogene;locus_tag=PKHYL_RS10325;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1950727	1952334	.	-	0	ID=cds-PKHYL_RS10325;Parent=gene-PKHYL_RS10325;Note=frameshifted;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019838356.1;locus_tag=PKHYL_RS10325;product=glycerol kinase GlpK;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1953139	1954020	.	+	.	ID=gene-PKHYL_RS17625;Name=PKHYL_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17625;old_locus_tag=PKHYL_25380
NZ_AP019516.1	Protein Homology	CDS	1953139	1954020	.	+	0	ID=cds-WP_269778155.1;Parent=gene-PKHYL_RS17625;Dbxref=Genbank:WP_269778155.1;Name=WP_269778155.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014385.2;locus_tag=PKHYL_RS17625;product=TolC family protein;protein_id=WP_269778155.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1953983	1954504	.	+	.	ID=gene-PKHYL_RS17630;Name=PKHYL_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17630;old_locus_tag=PKHYL_25390
NZ_AP019516.1	Protein Homology	CDS	1953983	1954504	.	+	0	ID=cds-WP_269778156.1;Parent=gene-PKHYL_RS17630;Dbxref=Genbank:WP_269778156.1;Name=WP_269778156.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014385.2;locus_tag=PKHYL_RS17630;product=TolC family protein;protein_id=WP_269778156.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1954408	1954806	.	+	.	ID=gene-PKHYL_RS10335;Name=PKHYL_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10335;old_locus_tag=PKHYL_25400
NZ_AP019516.1	Protein Homology	CDS	1954408	1954806	.	+	0	ID=cds-WP_240366526.1;Parent=gene-PKHYL_RS10335;Dbxref=Genbank:WP_240366526.1;Name=WP_240366526.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014385.2;locus_tag=PKHYL_RS10335;product=TolC family protein;protein_id=WP_240366526.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1955017	1955502	.	+	.	ID=gene-PKHYL_RS17635;Name=PKHYL_RS17635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17635;old_locus_tag=PKHYL_25410
NZ_AP019516.1	Protein Homology	CDS	1955017	1955502	.	+	0	ID=cds-WP_269778157.1;Parent=gene-PKHYL_RS17635;Dbxref=Genbank:WP_269778157.1;Name=WP_269778157.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015587.2;locus_tag=PKHYL_RS17635;product=YihY/virulence factor BrkB family protein;protein_id=WP_269778157.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1955534	1955839	.	+	.	ID=gene-PKHYL_RS17640;Name=PKHYL_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17640;old_locus_tag=PKHYL_25420
NZ_AP019516.1	Protein Homology	CDS	1955534	1955839	.	+	0	ID=cds-WP_269778158.1;Parent=gene-PKHYL_RS17640;Dbxref=Genbank:WP_269778158.1;Name=WP_269778158.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015587.2;locus_tag=PKHYL_RS17640;product=YihY/virulence factor BrkB family protein;protein_id=WP_269778158.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1956085	1957086	.	+	.	ID=gene-PKHYL_RS10345;Name=PKHYL_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10345;old_locus_tag=PKHYL_25440
NZ_AP019516.1	Protein Homology	CDS	1956085	1957086	.	+	0	ID=cds-WP_240365086.1;Parent=gene-PKHYL_RS10345;Dbxref=Genbank:WP_240365086.1;Name=WP_240365086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393982.1;locus_tag=PKHYL_RS10345;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_240365086.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1957096	1957530	.	+	.	ID=gene-PKHYL_RS10350;Name=PKHYL_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10350;old_locus_tag=PKHYL_25450
NZ_AP019516.1	Protein Homology	CDS	1957096	1957530	.	+	0	ID=cds-WP_240365087.1;Parent=gene-PKHYL_RS10350;Dbxref=Genbank:WP_240365087.1;Name=WP_240365087.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024110.2;locus_tag=PKHYL_RS10350;product=ABC transporter permease;protein_id=WP_240365087.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1957562	1958383	.	+	.	ID=gene-PKHYL_RS10355;Name=PKHYL_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10355;old_locus_tag=PKHYL_25460
NZ_AP019516.1	GeneMarkS-2+	CDS	1957562	1958383	.	+	0	ID=cds-WP_240365088.1;Parent=gene-PKHYL_RS10355;Dbxref=Genbank:WP_240365088.1;Name=WP_240365088.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10355;product=ABC transporter permease;protein_id=WP_240365088.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1958328	1959467	.	+	.	ID=gene-PKHYL_RS10360;Name=PKHYL_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10360;old_locus_tag=PKHYL_25470
NZ_AP019516.1	Protein Homology	CDS	1958328	1959467	.	+	0	ID=cds-WP_240365089.1;Parent=gene-PKHYL_RS10360;Dbxref=Genbank:WP_240365089.1;Name=WP_240365089.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024110.2;locus_tag=PKHYL_RS10360;product=ABC transporter permease;protein_id=WP_240365089.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1959699	1961347	.	-	.	ID=gene-PKHYL_RS10365;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=pseudogene;locus_tag=PKHYL_RS10365;old_locus_tag=PKHYL_25480;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1959699	1961347	.	-	0	ID=cds-PKHYL_RS10365;Parent=gene-PKHYL_RS10365;Note=frameshifted;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (B-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198792.1;locus_tag=PKHYL_RS10365;product=Si-specific NAD(P)(+) transhydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1961506	1962339	.	-	.	ID=gene-PKHYL_RS10370;Name=PKHYL_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10370;old_locus_tag=PKHYL_25500
NZ_AP019516.1	Protein Homology	CDS	1961506	1962339	.	-	0	ID=cds-WP_178379290.1;Parent=gene-PKHYL_RS10370;Dbxref=Genbank:WP_178379290.1;Name=WP_178379290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005242327.1;locus_tag=PKHYL_RS10370;product=kinase/pyrophosphorylase;protein_id=WP_178379290.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1963001	1965381	.	+	.	ID=gene-PKHYL_RS10375;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=pseudogene;locus_tag=PKHYL_RS10375;old_locus_tag=PKHYL_25520;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1963001	1965381	.	+	0	ID=cds-PKHYL_RS10375;Parent=gene-PKHYL_RS10375;Note=frameshifted;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280607.1;locus_tag=PKHYL_RS10375;product=phosphoenolpyruvate synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1965495	1966475	.	+	.	ID=gene-PKHYL_RS10380;Name=PKHYL_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10380;old_locus_tag=PKHYL_25530
NZ_AP019516.1	Protein Homology	CDS	1965495	1966475	.	+	0	ID=cds-WP_093070994.1;Parent=gene-PKHYL_RS10380;Dbxref=Genbank:WP_093070994.1;Name=WP_093070994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513371.1;locus_tag=PKHYL_RS10380;product=RDD family protein;protein_id=WP_093070994.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1966741	1967145	.	+	.	ID=gene-PKHYL_RS10385;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=PKHYL_RS10385;old_locus_tag=PKHYL_25540
NZ_AP019516.1	Protein Homology	CDS	1966741	1967145	.	+	0	ID=cds-WP_071001316.1;Parent=gene-PKHYL_RS10385;Dbxref=Genbank:WP_071001316.1;Name=WP_071001316.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960859.1;locus_tag=PKHYL_RS10385;product=30S ribosomal protein S6;protein_id=WP_071001316.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1967162	1967392	.	+	.	ID=gene-PKHYL_RS10390;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=PKHYL_RS10390;old_locus_tag=PKHYL_25550
NZ_AP019516.1	Protein Homology	CDS	1967162	1967392	.	+	0	ID=cds-WP_010198808.1;Parent=gene-PKHYL_RS10390;Dbxref=Genbank:WP_010198808.1;Name=WP_010198808.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198808.1;locus_tag=PKHYL_RS10390;product=30S ribosomal protein S18;protein_id=WP_010198808.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1967413	1967919	.	+	.	ID=gene-PKHYL_RS10395;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=PKHYL_RS10395;old_locus_tag=PKHYL_25560
NZ_AP019516.1	Protein Homology	CDS	1967413	1967919	.	+	0	ID=cds-WP_093070991.1;Parent=gene-PKHYL_RS10395;Dbxref=Genbank:WP_093070991.1;Name=WP_093070991.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513369.1;locus_tag=PKHYL_RS10395;product=50S ribosomal protein L9;protein_id=WP_093070991.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1968242	1968481	.	+	.	ID=gene-PKHYL_RS10400;Name=PKHYL_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10400;old_locus_tag=PKHYL_25570
NZ_AP019516.1	Protein Homology	CDS	1968242	1968481	.	+	0	ID=cds-WP_093070989.1;Parent=gene-PKHYL_RS10400;Dbxref=Genbank:WP_093070989.1;Name=WP_093070989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198729.1;locus_tag=PKHYL_RS10400;product=hypothetical protein;protein_id=WP_093070989.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1968886	1970025	.	+	.	ID=gene-PKHYL_RS10405;Name=PKHYL_RS10405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10405;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1968886	1970025	.	+	0	ID=cds-PKHYL_RS10405;Parent=gene-PKHYL_RS10405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014500.2;locus_tag=PKHYL_RS10405;product=GntP family permease;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1970272	1971324	.	+	.	ID=gene-PKHYL_RS10410;Name=PKHYL_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10410;old_locus_tag=PKHYL_25610
NZ_AP019516.1	Protein Homology	CDS	1970272	1971324	.	+	0	ID=cds-WP_240365090.1;Parent=gene-PKHYL_RS10410;Dbxref=Genbank:WP_240365090.1;Name=WP_240365090.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014634.2;locus_tag=PKHYL_RS10410;product=glycerate kinase;protein_id=WP_240365090.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1971494	1971655	.	-	.	ID=gene-PKHYL_RS10415;Name=PKHYL_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10415;old_locus_tag=PKHYL_25620
NZ_AP019516.1	GeneMarkS-2+	CDS	1971494	1971655	.	-	0	ID=cds-WP_240365091.1;Parent=gene-PKHYL_RS10415;Dbxref=Genbank:WP_240365091.1;Name=WP_240365091.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10415;product=hypothetical protein;protein_id=WP_240365091.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1971727	1972365	.	-	.	ID=gene-PKHYL_RS10420;Name=PKHYL_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10420;old_locus_tag=PKHYL_25630
NZ_AP019516.1	Protein Homology	CDS	1971727	1972365	.	-	0	ID=cds-WP_240365092.1;Parent=gene-PKHYL_RS10420;Dbxref=Genbank:WP_240365092.1;Name=WP_240365092.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=PKHYL_RS10420;product=LysR family transcriptional regulator;protein_id=WP_240365092.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1972474	1972974	.	+	.	ID=gene-PKHYL_RS10425;Name=PKHYL_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10425;old_locus_tag=PKHYL_25640
NZ_AP019516.1	Protein Homology	CDS	1972474	1972974	.	+	0	ID=cds-WP_071001310.1;Parent=gene-PKHYL_RS10425;Dbxref=Genbank:WP_071001310.1;Name=WP_071001310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443238.1;locus_tag=PKHYL_RS10425;product=lactoylglutathione lyase family protein;protein_id=WP_071001310.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1973234	1973359	.	+	.	ID=gene-PKHYL_RS17645;Name=PKHYL_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17645;old_locus_tag=PKHYL_25650
NZ_AP019516.1	GeneMarkS-2+	CDS	1973234	1973359	.	+	0	ID=cds-WP_257785220.1;Parent=gene-PKHYL_RS17645;Dbxref=Genbank:WP_257785220.1;Name=WP_257785220.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17645;product=hypothetical protein;protein_id=WP_257785220.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1973548	1973769	.	-	.	ID=gene-PKHYL_RS10430;Name=PKHYL_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10430;old_locus_tag=PKHYL_25660
NZ_AP019516.1	Protein Homology	CDS	1973548	1973769	.	-	0	ID=cds-WP_240365093.1;Parent=gene-PKHYL_RS10430;Dbxref=Genbank:WP_240365093.1;Name=WP_240365093.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013228.2;locus_tag=PKHYL_RS10430;product=RidA family protein;protein_id=WP_240365093.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1973742	1973888	.	-	.	ID=gene-PKHYL_RS10435;Name=PKHYL_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10435
NZ_AP019516.1	GeneMarkS-2+	CDS	1973742	1973888	.	-	0	ID=cds-WP_240365094.1;Parent=gene-PKHYL_RS10435;Dbxref=Genbank:WP_240365094.1;Name=WP_240365094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10435;product=hypothetical protein;protein_id=WP_240365094.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1973940	1975186	.	-	.	ID=gene-PKHYL_RS10440;Name=PKHYL_RS10440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10440;old_locus_tag=PKHYL_25670;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1973940	1975186	.	-	0	ID=cds-PKHYL_RS10440;Parent=gene-PKHYL_RS10440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959756.1;locus_tag=PKHYL_RS10440;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1975451	1977649	.	-	.	ID=gene-PKHYL_RS10445;Name=PKHYL_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10445;old_locus_tag=PKHYL_25680
NZ_AP019516.1	Protein Homology	CDS	1975451	1977649	.	-	0	ID=cds-WP_071001308.1;Parent=gene-PKHYL_RS10445;Dbxref=Genbank:WP_071001308.1;Name=WP_071001308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513356.1;locus_tag=PKHYL_RS10445;product=ATP-dependent helicase;protein_id=WP_071001308.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1978092	1979184	.	+	.	ID=gene-PKHYL_RS10450;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=pseudogene;locus_tag=PKHYL_RS10450;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1978092	1979184	.	+	0	ID=cds-PKHYL_RS10450;Parent=gene-PKHYL_RS10450;Note=frameshifted%3B internal stop;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004995132.1;locus_tag=PKHYL_RS10450;product=redox-regulated ATPase YchF;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1979368	1979880	.	+	.	ID=gene-PKHYL_RS10455;Name=PKHYL_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10455;old_locus_tag=PKHYL_25710
NZ_AP019516.1	GeneMarkS-2+	CDS	1979368	1979880	.	+	0	ID=cds-WP_071001306.1;Parent=gene-PKHYL_RS10455;Dbxref=Genbank:WP_071001306.1;Name=WP_071001306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10455;product=hypothetical protein;protein_id=WP_071001306.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1979959	1981375	.	+	.	ID=gene-PKHYL_RS10460;Name=PKHYL_RS10460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10460;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1979959	1981375	.	+	0	ID=cds-PKHYL_RS10460;Parent=gene-PKHYL_RS10460;Note=frameshifted;Ontology_term=GO:0006203,GO:0008832;gbkey=CDS;go_function=dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513856.1;locus_tag=PKHYL_RS10460;product=deoxyguanosinetriphosphate triphosphohydrolase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1981480	1982161	.	+	.	ID=gene-PKHYL_RS10465;Name=PKHYL_RS10465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10465;old_locus_tag=PKHYL_25740;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1981480	1982161	.	+	0	ID=cds-PKHYL_RS10465;Parent=gene-PKHYL_RS10465;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513857.1;locus_tag=PKHYL_RS10465;product=TetR family transcriptional regulator;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1982183	1983229	.	-	.	ID=gene-PKHYL_RS10470;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=PKHYL_RS10470;old_locus_tag=PKHYL_25750
NZ_AP019516.1	Protein Homology	CDS	1982183	1983229	.	-	0	ID=cds-WP_071001304.1;Parent=gene-PKHYL_RS10470;Dbxref=Genbank:WP_071001304.1;Name=WP_071001304.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196184.1;locus_tag=PKHYL_RS10470;product=type II secretion system minor pseudopilin GspK;protein_id=WP_071001304.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1983278	1984105	.	-	.	ID=gene-PKHYL_RS10475;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=PKHYL_RS10475;old_locus_tag=PKHYL_25760
NZ_AP019516.1	Protein Homology	CDS	1983278	1984105	.	-	0	ID=cds-WP_071001303.1;Parent=gene-PKHYL_RS10475;Dbxref=Genbank:WP_071001303.1;Name=WP_071001303.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspJ;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196187.1;locus_tag=PKHYL_RS10475;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_071001303.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1984108	1984602	.	-	.	ID=gene-PKHYL_RS10480;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=PKHYL_RS10480;old_locus_tag=PKHYL_25770
NZ_AP019516.1	Protein Homology	CDS	1984108	1984602	.	-	0	ID=cds-WP_240365095.1;Parent=gene-PKHYL_RS10480;Dbxref=Genbank:WP_240365095.1;Name=WP_240365095.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196190.1;locus_tag=PKHYL_RS10480;product=type II secretion system minor pseudopilin GspI;protein_id=WP_240365095.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1984611	1985300	.	-	.	ID=gene-PKHYL_RS10485;Name=PKHYL_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10485;old_locus_tag=PKHYL_25780
NZ_AP019516.1	Protein Homology	CDS	1984611	1985300	.	-	0	ID=cds-WP_240365096.1;Parent=gene-PKHYL_RS10485;Dbxref=Genbank:WP_240365096.1;Name=WP_240365096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196192.1;locus_tag=PKHYL_RS10485;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_240365096.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1985604	1986287	.	-	.	ID=gene-PKHYL_RS10490;Name=PKHYL_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10490;old_locus_tag=PKHYL_25790
NZ_AP019516.1	Protein Homology	CDS	1985604	1986287	.	-	0	ID=cds-WP_071001302.1;Parent=gene-PKHYL_RS10490;Dbxref=Genbank:WP_071001302.1;Name=WP_071001302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513862.1;locus_tag=PKHYL_RS10490;product=TetR/AcrR family transcriptional regulator;protein_id=WP_071001302.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1986522	1987310	.	-	.	ID=gene-PKHYL_RS10495;Name=PKHYL_RS10495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10495;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1986522	1987310	.	-	0	ID=cds-PKHYL_RS10495;Parent=gene-PKHYL_RS10495;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013213.2;locus_tag=PKHYL_RS10495;product=TatD family hydrolase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1987485	1989269	.	-	.	ID=gene-PKHYL_RS10500;Name=PKHYL_RS10500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10500;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1987485	1989269	.	-	0	ID=cds-PKHYL_RS10500;Parent=gene-PKHYL_RS10500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005329976.1;locus_tag=PKHYL_RS10500;product=GspE/PulE family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1989328	1990185	.	-	.	ID=gene-PKHYL_RS10505;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=PKHYL_RS10505;old_locus_tag=PKHYL_25860
NZ_AP019516.1	Protein Homology	CDS	1989328	1990185	.	-	0	ID=cds-WP_071001299.1;Parent=gene-PKHYL_RS10505;Dbxref=Genbank:WP_071001299.1;Name=WP_071001299.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280165.1;locus_tag=PKHYL_RS10505;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_071001299.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1990613	1991401	.	+	.	ID=gene-PKHYL_RS10510;Name=PKHYL_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10510;old_locus_tag=PKHYL_25870
NZ_AP019516.1	Protein Homology	CDS	1990613	1991401	.	+	0	ID=cds-WP_240365097.1;Parent=gene-PKHYL_RS10510;Dbxref=Genbank:WP_240365097.1;Name=WP_240365097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659117.1;locus_tag=PKHYL_RS10510;product=ferredoxin--NADP reductase;protein_id=WP_240365097.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1991526	1991612	.	+	.	ID=gene-PKHYL_RS10515;Name=PKHYL_RS10515;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS10515;old_locus_tag=PKHYL_t00260
NZ_AP019516.1	tRNAscan-SE	tRNA	1991526	1991612	.	+	.	ID=rna-PKHYL_RS10515;Parent=gene-PKHYL_RS10515;anticodon=(pos:1991560..1991562);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS10515;product=tRNA-Leu
NZ_AP019516.1	tRNAscan-SE	exon	1991526	1991612	.	+	.	ID=exon-PKHYL_RS10515-1;Parent=rna-PKHYL_RS10515;anticodon=(pos:1991560..1991562);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS10515;product=tRNA-Leu
NZ_AP019516.1	RefSeq	gene	1991725	1991934	.	-	.	ID=gene-PKHYL_RS10520;Name=PKHYL_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10520;old_locus_tag=PKHYL_25880
NZ_AP019516.1	GeneMarkS-2+	CDS	1991725	1991934	.	-	0	ID=cds-WP_240365098.1;Parent=gene-PKHYL_RS10520;Dbxref=Genbank:WP_240365098.1;Name=WP_240365098.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10520;product=hypothetical protein;protein_id=WP_240365098.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1992443	1993528	.	+	.	ID=gene-PKHYL_RS10525;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=PKHYL_RS10525;old_locus_tag=PKHYL_25890
NZ_AP019516.1	Protein Homology	CDS	1992443	1993528	.	+	0	ID=cds-WP_075107379.1;Parent=gene-PKHYL_RS10525;Dbxref=Genbank:WP_075107379.1;Name=WP_075107379.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199808.1;locus_tag=PKHYL_RS10525;product=DNA polymerase IV;protein_id=WP_075107379.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1993719	1994921	.	+	.	ID=gene-PKHYL_RS10530;Name=queA;gbkey=Gene;gene=queA;gene_biotype=pseudogene;locus_tag=PKHYL_RS10530;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1993719	1994921	.	+	0	ID=cds-PKHYL_RS10530;Parent=gene-PKHYL_RS10530;Note=frameshifted;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199811.1;locus_tag=PKHYL_RS10530;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	1995060	1996130	.	+	.	ID=gene-PKHYL_RS10535;Name=PKHYL_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10535;old_locus_tag=PKHYL_25920
NZ_AP019516.1	GeneMarkS-2+	CDS	1995060	1996130	.	+	0	ID=cds-WP_240365099.1;Parent=gene-PKHYL_RS10535;Dbxref=Genbank:WP_240365099.1;Name=WP_240365099.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10535;product=hypothetical protein;protein_id=WP_240365099.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1996154	1996492	.	+	.	ID=gene-PKHYL_RS10540;Name=PKHYL_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10540;old_locus_tag=PKHYL_25930
NZ_AP019516.1	Protein Homology	CDS	1996154	1996492	.	+	0	ID=cds-WP_240365100.1;Parent=gene-PKHYL_RS10540;Dbxref=Genbank:WP_240365100.1;Name=WP_240365100.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013630.2;locus_tag=PKHYL_RS10540;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_240365100.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1996422	1996784	.	+	.	ID=gene-PKHYL_RS10545;Name=PKHYL_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10545;old_locus_tag=PKHYL_25940
NZ_AP019516.1	GeneMarkS-2+	CDS	1996422	1996784	.	+	0	ID=cds-WP_240365101.1;Parent=gene-PKHYL_RS10545;Dbxref=Genbank:WP_240365101.1;Name=WP_240365101.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10545;product=hypothetical protein;protein_id=WP_240365101.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1996873	1998555	.	+	.	ID=gene-PKHYL_RS10550;Name=PKHYL_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10550;old_locus_tag=PKHYL_25950
NZ_AP019516.1	Protein Homology	CDS	1996873	1998555	.	+	0	ID=cds-WP_071001293.1;Parent=gene-PKHYL_RS10550;Dbxref=Genbank:WP_071001293.1;Name=WP_071001293.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03504.1;locus_tag=PKHYL_RS10550;product=hypothetical protein;protein_id=WP_071001293.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1998741	1999328	.	+	.	ID=gene-PKHYL_RS10555;Name=PKHYL_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10555;old_locus_tag=PKHYL_25960
NZ_AP019516.1	Protein Homology	CDS	1998741	1999328	.	+	0	ID=cds-WP_240365102.1;Parent=gene-PKHYL_RS10555;Dbxref=Genbank:WP_240365102.1;Name=WP_240365102.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012913.2;locus_tag=PKHYL_RS10555;product=asparaginase domain-containing protein;protein_id=WP_240365102.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	1999277	1999813	.	+	.	ID=gene-PKHYL_RS10560;Name=PKHYL_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10560;old_locus_tag=PKHYL_25970
NZ_AP019516.1	Protein Homology	CDS	1999277	1999813	.	+	0	ID=cds-WP_240365103.1;Parent=gene-PKHYL_RS10560;Dbxref=Genbank:WP_240365103.1;Name=WP_240365103.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036996.2;locus_tag=PKHYL_RS10560;product=hypothetical protein;protein_id=WP_240365103.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	1999857	2000697	.	+	.	ID=gene-PKHYL_RS10565;Name=truA;gbkey=Gene;gene=truA;gene_biotype=pseudogene;locus_tag=PKHYL_RS10565;old_locus_tag=PKHYL_25980;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	1999857	2000697	.	+	0	ID=cds-PKHYL_RS10565;Parent=gene-PKHYL_RS10565;Note=frameshifted;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199821.1;locus_tag=PKHYL_RS10565;product=tRNA pseudouridine(38-40) synthase TruA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2000809	2001030	.	+	.	ID=gene-PKHYL_RS10570;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=PKHYL_RS10570;old_locus_tag=PKHYL_25990
NZ_AP019516.1	Protein Homology	CDS	2000809	2001030	.	+	0	ID=cds-WP_021814850.1;Parent=gene-PKHYL_RS10570;Dbxref=Genbank:WP_021814850.1;Name=WP_021814850.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199824.1;locus_tag=PKHYL_RS10570;product=translation initiation factor IF-1;protein_id=WP_021814850.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2001287	2001451	.	-	.	ID=gene-PKHYL_RS17650;Name=PKHYL_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17650
NZ_AP019516.1	Protein Homology	CDS	2001287	2001451	.	-	0	ID=cds-WP_269778159.1;Parent=gene-PKHYL_RS17650;Dbxref=Genbank:WP_269778159.1;Name=WP_269778159.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015679.2;locus_tag=PKHYL_RS17650;product=L%2CD-transpeptidase;protein_id=WP_269778159.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2001565	2002290	.	-	.	ID=gene-PKHYL_RS10575;Name=PKHYL_RS10575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10575;old_locus_tag=PKHYL_26000;partial=true;pseudo=true;start_range=.,2001565
NZ_AP019516.1	Protein Homology	CDS	2001565	2002290	.	-	0	ID=cds-PKHYL_RS10575;Parent=gene-PKHYL_RS10575;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015679.2;locus_tag=PKHYL_RS10575;partial=true;product=L%2CD-transpeptidase family protein;pseudo=true;start_range=.,2001565;transl_table=11
NZ_AP019516.1	RefSeq	gene	2002846	2003949	.	-	.	ID=gene-PKHYL_RS10580;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=PKHYL_RS10580;old_locus_tag=PKHYL_26010
NZ_AP019516.1	Protein Homology	CDS	2002846	2003949	.	-	0	ID=cds-WP_071001290.1;Parent=gene-PKHYL_RS10580;Dbxref=Genbank:WP_071001290.1;Name=WP_071001290.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443714.1;locus_tag=PKHYL_RS10580;product=3-isopropylmalate dehydrogenase;protein_id=WP_071001290.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2003989	2004651	.	-	.	ID=gene-PKHYL_RS10585;Name=PKHYL_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10585;old_locus_tag=PKHYL_26020
NZ_AP019516.1	Protein Homology	CDS	2003989	2004651	.	-	0	ID=cds-WP_240365104.1;Parent=gene-PKHYL_RS10585;Dbxref=Genbank:WP_240365104.1;Name=WP_240365104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443715.1;locus_tag=PKHYL_RS10585;product=hypothetical protein;protein_id=WP_240365104.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2004862	2005510	.	-	.	ID=gene-PKHYL_RS10590;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=pseudogene;locus_tag=PKHYL_RS10590;old_locus_tag=PKHYL_26030;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2004862	2005510	.	-	0	ID=cds-PKHYL_RS10590;Parent=gene-PKHYL_RS10590;Note=frameshifted;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443716.1;locus_tag=PKHYL_RS10590;product=3-isopropylmalate dehydratase small subunit;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2005652	2007067	.	-	.	ID=gene-PKHYL_RS10595;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=pseudogene;locus_tag=PKHYL_RS10595;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2005652	2007067	.	-	0	ID=cds-PKHYL_RS10595;Parent=gene-PKHYL_RS10595;Note=frameshifted;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280682.1;locus_tag=PKHYL_RS10595;product=3-isopropylmalate dehydratase large subunit;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2007540	2008412	.	+	.	ID=gene-PKHYL_RS10600;Name=PKHYL_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10600;old_locus_tag=PKHYL_26080
NZ_AP019516.1	Protein Homology	CDS	2007540	2008412	.	+	0	ID=cds-WP_071001286.1;Parent=gene-PKHYL_RS10600;Dbxref=Genbank:WP_071001286.1;Name=WP_071001286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013107970.1;locus_tag=PKHYL_RS10600;product=LysR family transcriptional regulator;protein_id=WP_071001286.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2008885	2010383	.	+	.	ID=gene-PKHYL_RS10605;Name=putP;gbkey=Gene;gene=putP;gene_biotype=pseudogene;locus_tag=PKHYL_RS10605;old_locus_tag=PKHYL_26100;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2008885	2010383	.	+	0	ID=cds-PKHYL_RS10605;Parent=gene-PKHYL_RS10605;Note=frameshifted;Ontology_term=GO:0015824,GO:0005298,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA;go_process=proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280684.1;locus_tag=PKHYL_RS10605;product=sodium/proline symporter PutP;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2010848	2012202	.	-	.	ID=gene-PKHYL_RS10610;Name=PKHYL_RS10610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10610;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2010848	2012202	.	-	0	ID=cds-PKHYL_RS10610;Parent=gene-PKHYL_RS10610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513905.1;locus_tag=PKHYL_RS10610;product=outer membrane protein transport protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2012572	2013783	.	-	.	ID=gene-PKHYL_RS10615;Name=PKHYL_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10615;old_locus_tag=PKHYL_26130
NZ_AP019516.1	Protein Homology	CDS	2012572	2013783	.	-	0	ID=cds-WP_071001280.1;Parent=gene-PKHYL_RS10615;Dbxref=Genbank:WP_071001280.1;Name=WP_071001280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513905.1;locus_tag=PKHYL_RS10615;product=outer membrane protein transport protein;protein_id=WP_071001280.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2014003	2014260	.	-	.	ID=gene-PKHYL_RS10620;Name=PKHYL_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10620;old_locus_tag=PKHYL_26140
NZ_AP019516.1	Protein Homology	CDS	2014003	2014260	.	-	0	ID=cds-WP_058024131.1;Parent=gene-PKHYL_RS10620;Dbxref=Genbank:WP_058024131.1;Name=WP_058024131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199882.1;locus_tag=PKHYL_RS10620;product=SlyX family protein;protein_id=WP_058024131.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2014502	2016441	.	+	.	ID=gene-PKHYL_RS10625;Name=PKHYL_RS10625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10625;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2014502	2016441	.	+	0	ID=cds-PKHYL_RS10625;Parent=gene-PKHYL_RS10625;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673093.1;locus_tag=PKHYL_RS10625;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2016957	2017542	.	+	.	ID=gene-PKHYL_RS10630;Name=petA;gbkey=Gene;gene=petA;gene_biotype=pseudogene;locus_tag=PKHYL_RS10630;old_locus_tag=PKHYL_26170;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2016957	2017542	.	+	0	ID=cds-PKHYL_RS10630;Parent=gene-PKHYL_RS10630;Note=frameshifted;Ontology_term=GO:0009060,GO:0008121,GO:0009055,GO:0045275;gbkey=CDS;gene=petA;go_component=respiratory chain complex III|0045275||IEA;go_function=ubiquinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657575.1;locus_tag=PKHYL_RS10630;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2017565	2018771	.	+	.	ID=gene-PKHYL_RS17655;Name=PKHYL_RS17655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17655;old_locus_tag=PKHYL_26190;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2017565	2018771	.	+	0	ID=cds-PKHYL_RS17655;Parent=gene-PKHYL_RS17655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657576.1;locus_tag=PKHYL_RS17655;product=cytochrome bc complex cytochrome b subunit;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2018771	2019485	.	+	.	ID=gene-PKHYL_RS10645;Name=PKHYL_RS10645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10645;old_locus_tag=PKHYL_26210;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2018771	2019485	.	+	0	ID=cds-PKHYL_RS10645;Parent=gene-PKHYL_RS10645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513911.1;locus_tag=PKHYL_RS10645;product=cytochrome c1;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2019682	2020296	.	+	.	ID=gene-PKHYL_RS10650;Name=PKHYL_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10650;old_locus_tag=PKHYL_26220
NZ_AP019516.1	Protein Homology	CDS	2019682	2020296	.	+	0	ID=cds-WP_071001275.1;Parent=gene-PKHYL_RS10650;Dbxref=Genbank:WP_071001275.1;Name=WP_071001275.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443723.1;locus_tag=PKHYL_RS10650;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_071001275.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2020429	2020862	.	+	.	ID=gene-PKHYL_RS10655;Name=PKHYL_RS10655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10655;old_locus_tag=PKHYL_26230;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2020429	2020862	.	+	0	ID=cds-PKHYL_RS10655;Parent=gene-PKHYL_RS10655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443724.1;locus_tag=PKHYL_RS10655;product=ClpXP protease specificity-enhancing factor;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2020968	2021543	.	-	.	ID=gene-PKHYL_RS10660;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=PKHYL_RS10660;old_locus_tag=PKHYL_26240
NZ_AP019516.1	Protein Homology	CDS	2020968	2021543	.	-	0	ID=cds-WP_058024138.1;Parent=gene-PKHYL_RS10660;Dbxref=Genbank:WP_058024138.1;Name=WP_058024138.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000985727.1;locus_tag=PKHYL_RS10660;product=dCTP deaminase;protein_id=WP_058024138.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2021656	2021991	.	-	.	ID=gene-PKHYL_RS10665;Name=PKHYL_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10665;old_locus_tag=PKHYL_26250
NZ_AP019516.1	Protein Homology	CDS	2021656	2021991	.	-	0	ID=cds-WP_240365105.1;Parent=gene-PKHYL_RS10665;Dbxref=Genbank:WP_240365105.1;Name=WP_240365105.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022427.2;locus_tag=PKHYL_RS10665;product=DUF2804 family protein;protein_id=WP_240365105.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2022000	2022776	.	-	.	ID=gene-PKHYL_RS10670;Name=PKHYL_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10670;old_locus_tag=PKHYL_26260
NZ_AP019516.1	Protein Homology	CDS	2022000	2022776	.	-	0	ID=cds-WP_240365106.1;Parent=gene-PKHYL_RS10670;Dbxref=Genbank:WP_240365106.1;Name=WP_240365106.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022427.2;locus_tag=PKHYL_RS10670;product=DUF2804 family protein;protein_id=WP_240365106.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2022848	2023228	.	-	.	ID=gene-PKHYL_RS10675;Name=PKHYL_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10675;old_locus_tag=PKHYL_26270
NZ_AP019516.1	GeneMarkS-2+	CDS	2022848	2023228	.	-	0	ID=cds-WP_240365107.1;Parent=gene-PKHYL_RS10675;Dbxref=Genbank:WP_240365107.1;Name=WP_240365107.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10675;product=hypothetical protein;protein_id=WP_240365107.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2023322	2024554	.	-	.	ID=gene-PKHYL_RS10680;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=PKHYL_RS10680;old_locus_tag=PKHYL_26280
NZ_AP019516.1	Protein Homology	CDS	2023322	2024554	.	-	0	ID=cds-WP_071001272.1;Parent=gene-PKHYL_RS10680;Dbxref=Genbank:WP_071001272.1;Name=WP_071001272.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443727.1;locus_tag=PKHYL_RS10680;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_071001272.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2024764	2025192	.	-	.	ID=gene-PKHYL_RS10685;Name=PKHYL_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10685;old_locus_tag=PKHYL_26290
NZ_AP019516.1	Protein Homology	CDS	2024764	2025192	.	-	0	ID=cds-WP_240365108.1;Parent=gene-PKHYL_RS10685;Dbxref=Genbank:WP_240365108.1;Name=WP_240365108.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=PKHYL_RS10685;product=SDR family oxidoreductase;protein_id=WP_240365108.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2025204	2025563	.	-	.	ID=gene-PKHYL_RS10690;Name=PKHYL_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10690;old_locus_tag=PKHYL_26300
NZ_AP019516.1	Protein Homology	CDS	2025204	2025563	.	-	0	ID=cds-WP_240365109.1;Parent=gene-PKHYL_RS10690;Dbxref=Genbank:WP_240365109.1;Name=WP_240365109.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012334.2;locus_tag=PKHYL_RS10690;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_240365109.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2025606	2026236	.	-	.	ID=gene-PKHYL_RS10695;Name=PKHYL_RS10695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10695;old_locus_tag=PKHYL_26320;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2025606	2026236	.	-	0	ID=cds-PKHYL_RS10695;Parent=gene-PKHYL_RS10695;Note=frameshifted;Ontology_term=GO:0008410;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513919.1;locus_tag=PKHYL_RS10695;product=3-oxoacid CoA-transferase subunit B;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2026362	2027075	.	-	.	ID=gene-PKHYL_RS10700;Name=PKHYL_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10700;old_locus_tag=PKHYL_26330
NZ_AP019516.1	Protein Homology	CDS	2026362	2027075	.	-	0	ID=cds-WP_071001269.1;Parent=gene-PKHYL_RS10700;Dbxref=Genbank:WP_071001269.1;Name=WP_071001269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513920.1;locus_tag=PKHYL_RS10700;product=CoA transferase subunit A;protein_id=WP_071001269.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2027433	2028849	.	+	.	ID=gene-PKHYL_RS10705;Name=PKHYL_RS10705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10705;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2027433	2028849	.	+	0	ID=cds-PKHYL_RS10705;Parent=gene-PKHYL_RS10705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443731.1;locus_tag=PKHYL_RS10705;product=GntP family permease;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2029213	2031311	.	+	.	ID=gene-PKHYL_RS10710;Name=metG;gbkey=Gene;gene=metG;gene_biotype=pseudogene;locus_tag=PKHYL_RS10710;old_locus_tag=PKHYL_26360;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2029213	2031311	.	+	0	ID=cds-PKHYL_RS10710;Parent=gene-PKHYL_RS10710;Note=frameshifted;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960926.1;locus_tag=PKHYL_RS10710;product=methionine--tRNA ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2032568	2033630	.	+	.	ID=gene-PKHYL_RS10715;Name=PKHYL_RS10715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10715;old_locus_tag=PKHYL_26380;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2032568	2033630	.	+	0	ID=cds-PKHYL_RS10715;Parent=gene-PKHYL_RS10715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199928.1;locus_tag=PKHYL_RS10715;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2033763	2034795	.	+	.	ID=gene-PKHYL_RS10720;Name=PKHYL_RS10720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10720;old_locus_tag=PKHYL_26400;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2033763	2034795	.	+	0	ID=cds-PKHYL_RS10720;Parent=gene-PKHYL_RS10720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199930.1;locus_tag=PKHYL_RS10720;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2035237	2036137	.	+	.	ID=gene-PKHYL_RS10725;Name=PKHYL_RS10725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10725;old_locus_tag=PKHYL_26410;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2035237	2036137	.	+	0	ID=cds-PKHYL_RS10725;Parent=gene-PKHYL_RS10725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280704.1;locus_tag=PKHYL_RS10725;product=ABC transporter permease;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2036202	2036995	.	+	.	ID=gene-PKHYL_RS10730;Name=PKHYL_RS10730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS10730;old_locus_tag=PKHYL_26430;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2036202	2036995	.	+	0	ID=cds-PKHYL_RS10730;Parent=gene-PKHYL_RS10730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199934.1;locus_tag=PKHYL_RS10730;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2037071	2038123	.	+	.	ID=gene-PKHYL_RS10735;Name=PKHYL_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10735;old_locus_tag=PKHYL_26440
NZ_AP019516.1	Protein Homology	CDS	2037071	2038123	.	+	0	ID=cds-WP_240365110.1;Parent=gene-PKHYL_RS10735;Dbxref=Genbank:WP_240365110.1;Name=WP_240365110.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012602.2;locus_tag=PKHYL_RS10735;product=molybdopterin-dependent oxidoreductase;protein_id=WP_240365110.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2038089	2038250	.	+	.	ID=gene-PKHYL_RS10740;Name=PKHYL_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10740
NZ_AP019516.1	GeneMarkS-2+	CDS	2038089	2038250	.	+	0	ID=cds-WP_240365111.1;Parent=gene-PKHYL_RS10740;Dbxref=Genbank:WP_240365111.1;Name=WP_240365111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10740;product=hypothetical protein;protein_id=WP_240365111.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2038254	2038409	.	+	.	ID=gene-PKHYL_RS10745;Name=PKHYL_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10745
NZ_AP019516.1	GeneMarkS-2+	CDS	2038254	2038409	.	+	0	ID=cds-WP_240365112.1;Parent=gene-PKHYL_RS10745;Dbxref=Genbank:WP_240365112.1;Name=WP_240365112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10745;product=hypothetical protein;protein_id=WP_240365112.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2038396	2038722	.	+	.	ID=gene-PKHYL_RS10750;Name=PKHYL_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10750;old_locus_tag=PKHYL_26450
NZ_AP019516.1	GeneMarkS-2+	CDS	2038396	2038722	.	+	0	ID=cds-WP_240365113.1;Parent=gene-PKHYL_RS10750;Dbxref=Genbank:WP_240365113.1;Name=WP_240365113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10750;product=hypothetical protein;protein_id=WP_240365113.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2038748	2039272	.	+	.	ID=gene-PKHYL_RS10755;Name=PKHYL_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10755;old_locus_tag=PKHYL_26460
NZ_AP019516.1	GeneMarkS-2+	CDS	2038748	2039272	.	+	0	ID=cds-WP_240365114.1;Parent=gene-PKHYL_RS10755;Dbxref=Genbank:WP_240365114.1;Name=WP_240365114.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10755;product=hypothetical protein;protein_id=WP_240365114.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2039269	2039397	.	+	.	ID=gene-PKHYL_RS17660;Name=PKHYL_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17660
NZ_AP019516.1	GeneMarkS-2+	CDS	2039269	2039397	.	+	0	ID=cds-WP_269778160.1;Parent=gene-PKHYL_RS17660;Dbxref=Genbank:WP_269778160.1;Name=WP_269778160.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17660;product=hypothetical protein;protein_id=WP_269778160.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2039609	2040571	.	+	.	ID=gene-PKHYL_RS10760;Name=PKHYL_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10760;old_locus_tag=PKHYL_26470
NZ_AP019516.1	Protein Homology	CDS	2039609	2040571	.	+	0	ID=cds-WP_071003567.1;Parent=gene-PKHYL_RS10760;Dbxref=Genbank:WP_071003567.1;Name=WP_071003567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280711.1;locus_tag=PKHYL_RS10760;product=sulfurtransferase FdhD;protein_id=WP_071003567.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2041484	2043151	.	+	.	ID=gene-PKHYL_RS10765;Name=PKHYL_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10765;old_locus_tag=PKHYL_26490
NZ_AP019516.1	Protein Homology	CDS	2041484	2043151	.	+	0	ID=cds-WP_093068989.1;Parent=gene-PKHYL_RS10765;Dbxref=Genbank:WP_093068989.1;Name=WP_093068989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199941.1;locus_tag=PKHYL_RS10765;product=sodium:solute symporter family protein;protein_id=WP_093068989.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2043353	2043997	.	-	.	ID=gene-PKHYL_RS10770;Name=PKHYL_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10770;old_locus_tag=PKHYL_26500
NZ_AP019516.1	GeneMarkS-2+	CDS	2043353	2043997	.	-	0	ID=cds-WP_240365115.1;Parent=gene-PKHYL_RS10770;Dbxref=Genbank:WP_240365115.1;Name=WP_240365115.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10770;product=hypothetical protein;protein_id=WP_240365115.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2043988	2044425	.	-	.	ID=gene-PKHYL_RS10775;Name=PKHYL_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10775
NZ_AP019516.1	Protein Homology	CDS	2043988	2044425	.	-	0	ID=cds-WP_240366528.1;Parent=gene-PKHYL_RS10775;Dbxref=Genbank:WP_240366528.1;Name=WP_240366528.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021220.2;locus_tag=PKHYL_RS10775;product=phage tail protein;protein_id=WP_240366528.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2044350	2044571	.	-	.	ID=gene-PKHYL_RS10780;Name=PKHYL_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10780;old_locus_tag=PKHYL_26520
NZ_AP019516.1	GeneMarkS-2+	CDS	2044350	2044571	.	-	0	ID=cds-WP_240365116.1;Parent=gene-PKHYL_RS10780;Dbxref=Genbank:WP_240365116.1;Name=WP_240365116.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10780;product=hypothetical protein;protein_id=WP_240365116.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2044564	2045373	.	-	.	ID=gene-PKHYL_RS10785;Name=PKHYL_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10785;old_locus_tag=PKHYL_26530
NZ_AP019516.1	Protein Homology	CDS	2044564	2045373	.	-	0	ID=cds-WP_240365117.1;Parent=gene-PKHYL_RS10785;Dbxref=Genbank:WP_240365117.1;Name=WP_240365117.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016736.2;locus_tag=PKHYL_RS10785;product=baseplate J/gp47 family protein;protein_id=WP_240365117.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2045393	2045758	.	-	.	ID=gene-PKHYL_RS10790;Name=PKHYL_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10790;old_locus_tag=PKHYL_26540
NZ_AP019516.1	Protein Homology	CDS	2045393	2045758	.	-	0	ID=cds-WP_240365118.1;Parent=gene-PKHYL_RS10790;Dbxref=Genbank:WP_240365118.1;Name=WP_240365118.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016829.2;locus_tag=PKHYL_RS10790;product=GPW/gp25 family protein;protein_id=WP_240365118.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2045922	2046245	.	-	.	ID=gene-PKHYL_RS10795;Name=PKHYL_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10795;old_locus_tag=PKHYL_26550
NZ_AP019516.1	Protein Homology	CDS	2045922	2046245	.	-	0	ID=cds-WP_240365119.1;Parent=gene-PKHYL_RS10795;Dbxref=Genbank:WP_240365119.1;Name=WP_240365119.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01644.1;locus_tag=PKHYL_RS10795;product=hypothetical protein;protein_id=WP_240365119.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2046301	2046459	.	-	.	ID=gene-PKHYL_RS10800;Name=PKHYL_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10800;old_locus_tag=PKHYL_26560
NZ_AP019516.1	GeneMarkS-2+	CDS	2046301	2046459	.	-	0	ID=cds-WP_240365120.1;Parent=gene-PKHYL_RS10800;Dbxref=Genbank:WP_240365120.1;Name=WP_240365120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10800;product=hypothetical protein;protein_id=WP_240365120.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2046456	2047436	.	-	.	ID=gene-PKHYL_RS10805;Name=PKHYL_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10805;old_locus_tag=PKHYL_26570
NZ_AP019516.1	Protein Homology	CDS	2046456	2047436	.	-	0	ID=cds-WP_240365121.1;Parent=gene-PKHYL_RS10805;Dbxref=Genbank:WP_240365121.1;Name=WP_240365121.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017739.2;locus_tag=PKHYL_RS10805;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_240365121.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2047429	2047686	.	-	.	ID=gene-PKHYL_RS10810;Name=PKHYL_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10810;old_locus_tag=PKHYL_26580
NZ_AP019516.1	Protein Homology	CDS	2047429	2047686	.	-	0	ID=cds-WP_240365122.1;Parent=gene-PKHYL_RS10810;Dbxref=Genbank:WP_240365122.1;Name=WP_240365122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672316.1;locus_tag=PKHYL_RS10810;product=tail protein X;protein_id=WP_240365122.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2047683	2048453	.	-	.	ID=gene-PKHYL_RS10815;Name=PKHYL_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10815;old_locus_tag=PKHYL_26590
NZ_AP019516.1	Protein Homology	CDS	2047683	2048453	.	-	0	ID=cds-WP_240365123.1;Parent=gene-PKHYL_RS10815;Dbxref=Genbank:WP_240365123.1;Name=WP_240365123.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018674.2;locus_tag=PKHYL_RS10815;product=phage tail protein;protein_id=WP_240365123.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2048450	2049835	.	-	.	ID=gene-PKHYL_RS10820;Name=PKHYL_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10820;old_locus_tag=PKHYL_26600
NZ_AP019516.1	Protein Homology	CDS	2048450	2049835	.	-	0	ID=cds-WP_269778161.1;Parent=gene-PKHYL_RS10820;Dbxref=Genbank:WP_269778161.1;Name=WP_269778161.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: protein motif:HMM:TIGR01760.1;locus_tag=PKHYL_RS10820;product=phage tail tape measure protein;protein_id=WP_269778161.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2049840	2050772	.	-	.	ID=gene-PKHYL_RS17665;Name=PKHYL_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17665;old_locus_tag=PKHYL_26610
NZ_AP019516.1	Protein Homology	CDS	2049840	2050772	.	-	0	ID=cds-WP_269778162.1;Parent=gene-PKHYL_RS17665;Dbxref=Genbank:WP_269778162.1;Name=WP_269778162.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: protein motif:HMM:TIGR01760.1;locus_tag=PKHYL_RS17665;product=phage tail tape measure protein;protein_id=WP_269778162.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2050783	2050941	.	-	.	ID=gene-PKHYL_RS10825;Name=PKHYL_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10825;old_locus_tag=PKHYL_26620
NZ_AP019516.1	GeneMarkS-2+	CDS	2050783	2050941	.	-	0	ID=cds-WP_240365124.1;Parent=gene-PKHYL_RS10825;Dbxref=Genbank:WP_240365124.1;Name=WP_240365124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10825;product=GpE family phage tail protein;protein_id=WP_240365124.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2050898	2051215	.	-	.	ID=gene-PKHYL_RS10830;Name=PKHYL_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10830;old_locus_tag=PKHYL_26630
NZ_AP019516.1	Protein Homology	CDS	2050898	2051215	.	-	0	ID=cds-WP_240365125.1;Parent=gene-PKHYL_RS10830;Dbxref=Genbank:WP_240365125.1;Name=WP_240365125.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021614.2;locus_tag=PKHYL_RS10830;product=phage tail assembly protein;protein_id=WP_240365125.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2051356	2051880	.	-	.	ID=gene-PKHYL_RS10835;Name=PKHYL_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10835;old_locus_tag=PKHYL_26640
NZ_AP019516.1	Protein Homology	CDS	2051356	2051880	.	-	0	ID=cds-WP_240365126.1;Parent=gene-PKHYL_RS10835;Dbxref=Genbank:WP_240365126.1;Name=WP_240365126.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672310.1;locus_tag=PKHYL_RS10835;product=phage major tail tube protein;protein_id=WP_240365126.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2051882	2052532	.	-	.	ID=gene-PKHYL_RS10840;Name=PKHYL_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10840;old_locus_tag=PKHYL_26650
NZ_AP019516.1	Protein Homology	CDS	2051882	2052532	.	-	0	ID=cds-WP_240365127.1;Parent=gene-PKHYL_RS10840;Dbxref=Genbank:WP_240365127.1;Name=WP_240365127.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016845.2;locus_tag=PKHYL_RS10840;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_240365127.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2052514	2052765	.	-	.	ID=gene-PKHYL_RS10845;Name=PKHYL_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10845;old_locus_tag=PKHYL_26660
NZ_AP019516.1	GeneMarkS-2+	CDS	2052514	2052765	.	-	0	ID=cds-WP_240365128.1;Parent=gene-PKHYL_RS10845;Dbxref=Genbank:WP_240365128.1;Name=WP_240365128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10845;product=hypothetical protein;protein_id=WP_240365128.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2052734	2053096	.	-	.	ID=gene-PKHYL_RS10850;Name=PKHYL_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10850;old_locus_tag=PKHYL_26670
NZ_AP019516.1	GeneMarkS-2+	CDS	2052734	2053096	.	-	0	ID=cds-WP_240365129.1;Parent=gene-PKHYL_RS10850;Dbxref=Genbank:WP_240365129.1;Name=WP_240365129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10850;product=hypothetical protein;protein_id=WP_240365129.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2053111	2053464	.	-	.	ID=gene-PKHYL_RS10855;Name=PKHYL_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10855;old_locus_tag=PKHYL_26680
NZ_AP019516.1	GeneMarkS-2+	CDS	2053111	2053464	.	-	0	ID=cds-WP_240365130.1;Parent=gene-PKHYL_RS10855;Dbxref=Genbank:WP_240365130.1;Name=WP_240365130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10855;product=hypothetical protein;protein_id=WP_240365130.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2053488	2053694	.	-	.	ID=gene-PKHYL_RS10860;Name=PKHYL_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10860;old_locus_tag=PKHYL_26690
NZ_AP019516.1	GeneMarkS-2+	CDS	2053488	2053694	.	-	0	ID=cds-WP_240365131.1;Parent=gene-PKHYL_RS10860;Dbxref=Genbank:WP_240365131.1;Name=WP_240365131.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10860;product=hypothetical protein;protein_id=WP_240365131.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2053694	2054668	.	-	.	ID=gene-PKHYL_RS10865;Name=PKHYL_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10865;old_locus_tag=PKHYL_26700
NZ_AP019516.1	GeneMarkS-2+	CDS	2053694	2054668	.	-	0	ID=cds-WP_240365132.1;Parent=gene-PKHYL_RS10865;Dbxref=Genbank:WP_240365132.1;Name=WP_240365132.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10865;product=hypothetical protein;protein_id=WP_240365132.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2054670	2055248	.	-	.	ID=gene-PKHYL_RS10870;Name=PKHYL_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10870;old_locus_tag=PKHYL_26710
NZ_AP019516.1	GeneMarkS-2+	CDS	2054670	2055248	.	-	0	ID=cds-WP_240365133.1;Parent=gene-PKHYL_RS10870;Dbxref=Genbank:WP_240365133.1;Name=WP_240365133.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10870;product=hypothetical protein;protein_id=WP_240365133.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2055258	2055707	.	-	.	ID=gene-PKHYL_RS10875;Name=PKHYL_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10875;old_locus_tag=PKHYL_26720
NZ_AP019516.1	Protein Homology	CDS	2055258	2055707	.	-	0	ID=cds-WP_240365134.1;Parent=gene-PKHYL_RS10875;Dbxref=Genbank:WP_240365134.1;Name=WP_240365134.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021185.2;locus_tag=PKHYL_RS10875;product=Gp37 family protein;protein_id=WP_240365134.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2055733	2056194	.	-	.	ID=gene-PKHYL_RS10880;Name=PKHYL_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10880;old_locus_tag=PKHYL_26730
NZ_AP019516.1	Protein Homology	CDS	2055733	2056194	.	-	0	ID=cds-WP_240365135.1;Parent=gene-PKHYL_RS10880;Dbxref=Genbank:WP_240365135.1;Name=WP_240365135.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018704.2;locus_tag=PKHYL_RS10880;product=DUF1320 domain-containing protein;protein_id=WP_240365135.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2056194	2056754	.	-	.	ID=gene-PKHYL_RS10885;Name=PKHYL_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10885;old_locus_tag=PKHYL_26740
NZ_AP019516.1	GeneMarkS-2+	CDS	2056194	2056754	.	-	0	ID=cds-WP_240365136.1;Parent=gene-PKHYL_RS10885;Dbxref=Genbank:WP_240365136.1;Name=WP_240365136.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10885;product=hypothetical protein;protein_id=WP_240365136.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2056836	2057759	.	-	.	ID=gene-PKHYL_RS10890;Name=PKHYL_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10890;old_locus_tag=PKHYL_26750
NZ_AP019516.1	Protein Homology	CDS	2056836	2057759	.	-	0	ID=cds-WP_240365137.1;Parent=gene-PKHYL_RS10890;Dbxref=Genbank:WP_240365137.1;Name=WP_240365137.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015802.2;locus_tag=PKHYL_RS10890;product=major capsid protein;protein_id=WP_240365137.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2057820	2058185	.	-	.	ID=gene-PKHYL_RS10895;Name=PKHYL_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10895;old_locus_tag=PKHYL_26760
NZ_AP019516.1	Protein Homology	CDS	2057820	2058185	.	-	0	ID=cds-WP_240365138.1;Parent=gene-PKHYL_RS10895;Dbxref=Genbank:WP_240365138.1;Name=WP_240365138.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021473.2;locus_tag=PKHYL_RS10895;product=DUF2190 family protein;protein_id=WP_240365138.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2058230	2059345	.	-	.	ID=gene-PKHYL_RS10900;Name=PKHYL_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10900;old_locus_tag=PKHYL_26770
NZ_AP019516.1	GeneMarkS-2+	CDS	2058230	2059345	.	-	0	ID=cds-WP_240365139.1;Parent=gene-PKHYL_RS10900;Dbxref=Genbank:WP_240365139.1;Name=WP_240365139.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10900;product=hypothetical protein;protein_id=WP_240365139.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2059585	2060085	.	-	.	ID=gene-PKHYL_RS10905;Name=PKHYL_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10905;old_locus_tag=PKHYL_26780
NZ_AP019516.1	Protein Homology	CDS	2059585	2060085	.	-	0	ID=cds-WP_240365140.1;Parent=gene-PKHYL_RS10905;Dbxref=Genbank:WP_240365140.1;Name=WP_240365140.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016927.2;locus_tag=PKHYL_RS10905;product=phage virion morphogenesis protein;protein_id=WP_240365140.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2060094	2060840	.	-	.	ID=gene-PKHYL_RS10910;Name=PKHYL_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10910;old_locus_tag=PKHYL_26790
NZ_AP019516.1	Protein Homology	CDS	2060094	2060840	.	-	0	ID=cds-WP_240365141.1;Parent=gene-PKHYL_RS10910;Dbxref=Genbank:WP_240365141.1;Name=WP_240365141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016148.2;locus_tag=PKHYL_RS10910;product=phage minor head protein;protein_id=WP_240365141.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2060837	2061250	.	-	.	ID=gene-PKHYL_RS10915;Name=PKHYL_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10915;old_locus_tag=PKHYL_26800
NZ_AP019516.1	Protein Homology	CDS	2060837	2061250	.	-	0	ID=cds-WP_240365142.1;Parent=gene-PKHYL_RS10915;Dbxref=Genbank:WP_240365142.1;Name=WP_240365142.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017850.2;locus_tag=PKHYL_RS10915;product=DUF935 family protein;protein_id=WP_240365142.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2061228	2062367	.	-	.	ID=gene-PKHYL_RS10920;Name=PKHYL_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10920;old_locus_tag=PKHYL_26810
NZ_AP019516.1	Protein Homology	CDS	2061228	2062367	.	-	0	ID=cds-WP_240365143.1;Parent=gene-PKHYL_RS10920;Dbxref=Genbank:WP_240365143.1;Name=WP_240365143.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017850.2;locus_tag=PKHYL_RS10920;product=DUF935 family protein;protein_id=WP_240365143.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2062368	2062685	.	-	.	ID=gene-PKHYL_RS10925;Name=PKHYL_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10925;old_locus_tag=PKHYL_26820
NZ_AP019516.1	GeneMarkS-2+	CDS	2062368	2062685	.	-	0	ID=cds-WP_240365144.1;Parent=gene-PKHYL_RS10925;Dbxref=Genbank:WP_240365144.1;Name=WP_240365144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10925;product=hypothetical protein;protein_id=WP_240365144.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2062755	2064638	.	-	.	ID=gene-PKHYL_RS10930;Name=PKHYL_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10930;old_locus_tag=PKHYL_26830
NZ_AP019516.1	Protein Homology	CDS	2062755	2064638	.	-	0	ID=cds-WP_240366529.1;Parent=gene-PKHYL_RS10930;Dbxref=Genbank:WP_240366529.1;Name=WP_240366529.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023411.2;locus_tag=PKHYL_RS10930;product=DUF3486 family protein;protein_id=WP_240366529.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2064536	2064970	.	-	.	ID=gene-PKHYL_RS10935;Name=PKHYL_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10935;old_locus_tag=PKHYL_26840
NZ_AP019516.1	GeneMarkS-2+	CDS	2064536	2064970	.	-	0	ID=cds-WP_240365145.1;Parent=gene-PKHYL_RS10935;Dbxref=Genbank:WP_240365145.1;Name=WP_240365145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10935;product=hypothetical protein;protein_id=WP_240365145.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2064974	2065303	.	-	.	ID=gene-PKHYL_RS10940;Name=PKHYL_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10940;old_locus_tag=PKHYL_26850
NZ_AP019516.1	GeneMarkS-2+	CDS	2064974	2065303	.	-	0	ID=cds-WP_240365146.1;Parent=gene-PKHYL_RS10940;Dbxref=Genbank:WP_240365146.1;Name=WP_240365146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10940;product=hypothetical protein;protein_id=WP_240365146.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2065287	2065499	.	-	.	ID=gene-PKHYL_RS10945;Name=PKHYL_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10945;old_locus_tag=PKHYL_26860
NZ_AP019516.1	GeneMarkS-2+	CDS	2065287	2065499	.	-	0	ID=cds-WP_240365147.1;Parent=gene-PKHYL_RS10945;Dbxref=Genbank:WP_240365147.1;Name=WP_240365147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10945;product=hypothetical protein;protein_id=WP_240365147.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2065492	2065800	.	-	.	ID=gene-PKHYL_RS10950;Name=PKHYL_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10950;old_locus_tag=PKHYL_26870
NZ_AP019516.1	GeneMarkS-2+	CDS	2065492	2065800	.	-	0	ID=cds-WP_240365148.1;Parent=gene-PKHYL_RS10950;Dbxref=Genbank:WP_240365148.1;Name=WP_240365148.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10950;product=hypothetical protein;protein_id=WP_240365148.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2065800	2066297	.	-	.	ID=gene-PKHYL_RS10955;Name=PKHYL_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10955;old_locus_tag=PKHYL_26880
NZ_AP019516.1	Protein Homology	CDS	2065800	2066297	.	-	0	ID=cds-WP_240365149.1;Parent=gene-PKHYL_RS10955;Dbxref=Genbank:WP_240365149.1;Name=WP_240365149.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023288.2;locus_tag=PKHYL_RS10955;product=N-acetylmuramidase family protein;protein_id=WP_240365149.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2066382	2066552	.	-	.	ID=gene-PKHYL_RS10960;Name=PKHYL_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10960;old_locus_tag=PKHYL_26890
NZ_AP019516.1	GeneMarkS-2+	CDS	2066382	2066552	.	-	0	ID=cds-WP_240365150.1;Parent=gene-PKHYL_RS10960;Dbxref=Genbank:WP_240365150.1;Name=WP_240365150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10960;product=hypothetical protein;protein_id=WP_240365150.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2066811	2067590	.	-	.	ID=gene-PKHYL_RS10965;Name=PKHYL_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10965;old_locus_tag=PKHYL_26910
NZ_AP019516.1	GeneMarkS-2+	CDS	2066811	2067590	.	-	0	ID=cds-WP_240365151.1;Parent=gene-PKHYL_RS10965;Dbxref=Genbank:WP_240365151.1;Name=WP_240365151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10965;product=hypothetical protein;protein_id=WP_240365151.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2067645	2067860	.	-	.	ID=gene-PKHYL_RS10970;Name=PKHYL_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10970;old_locus_tag=PKHYL_26920
NZ_AP019516.1	Protein Homology	CDS	2067645	2067860	.	-	0	ID=cds-WP_240366530.1;Parent=gene-PKHYL_RS10970;Dbxref=Genbank:WP_240366530.1;Name=WP_240366530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005153114.1;locus_tag=PKHYL_RS10970;product=excalibur calcium-binding domain-containing protein;protein_id=WP_240366530.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2067934	2068434	.	-	.	ID=gene-PKHYL_RS10975;Name=PKHYL_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10975;old_locus_tag=PKHYL_26930
NZ_AP019516.1	GeneMarkS-2+	CDS	2067934	2068434	.	-	0	ID=cds-WP_240365152.1;Parent=gene-PKHYL_RS10975;Dbxref=Genbank:WP_240365152.1;Name=WP_240365152.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10975;product=hypothetical protein;protein_id=WP_240365152.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2068855	2069274	.	-	.	ID=gene-PKHYL_RS10980;Name=PKHYL_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10980;old_locus_tag=PKHYL_26940
NZ_AP019516.1	Protein Homology	CDS	2068855	2069274	.	-	0	ID=cds-WP_240365153.1;Parent=gene-PKHYL_RS10980;Dbxref=Genbank:WP_240365153.1;Name=WP_240365153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005215735.1;locus_tag=PKHYL_RS10980;product=helix-turn-helix transcriptional regulator;protein_id=WP_240365153.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2069428	2069679	.	+	.	ID=gene-PKHYL_RS10985;Name=PKHYL_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10985;old_locus_tag=PKHYL_26950
NZ_AP019516.1	Protein Homology	CDS	2069428	2069679	.	+	0	ID=cds-WP_240365154.1;Parent=gene-PKHYL_RS10985;Dbxref=Genbank:WP_240365154.1;Name=WP_240365154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04111.1;locus_tag=PKHYL_RS10985;product=DNA-binding protein;protein_id=WP_240365154.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2069676	2069828	.	+	.	ID=gene-PKHYL_RS10990;Name=PKHYL_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10990;old_locus_tag=PKHYL_26960
NZ_AP019516.1	GeneMarkS-2+	CDS	2069676	2069828	.	+	0	ID=cds-WP_240365155.1;Parent=gene-PKHYL_RS10990;Dbxref=Genbank:WP_240365155.1;Name=WP_240365155.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10990;product=hypothetical protein;protein_id=WP_240365155.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2069825	2070043	.	+	.	ID=gene-PKHYL_RS10995;Name=PKHYL_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS10995;old_locus_tag=PKHYL_26970
NZ_AP019516.1	GeneMarkS-2+	CDS	2069825	2070043	.	+	0	ID=cds-WP_240365156.1;Parent=gene-PKHYL_RS10995;Dbxref=Genbank:WP_240365156.1;Name=WP_240365156.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS10995;product=hypothetical protein;protein_id=WP_240365156.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2070027	2070311	.	+	.	ID=gene-PKHYL_RS11000;Name=PKHYL_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11000;old_locus_tag=PKHYL_26980
NZ_AP019516.1	GeneMarkS-2+	CDS	2070027	2070311	.	+	0	ID=cds-WP_240365157.1;Parent=gene-PKHYL_RS11000;Dbxref=Genbank:WP_240365157.1;Name=WP_240365157.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11000;product=hypothetical protein;protein_id=WP_240365157.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2070319	2071005	.	+	.	ID=gene-PKHYL_RS11005;Name=PKHYL_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11005;old_locus_tag=PKHYL_26990
NZ_AP019516.1	Protein Homology	CDS	2070319	2071005	.	+	0	ID=cds-WP_240365158.1;Parent=gene-PKHYL_RS11005;Dbxref=Genbank:WP_240365158.1;Name=WP_240365158.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022744.2;locus_tag=PKHYL_RS11005;product=DUF3102 domain-containing protein;protein_id=WP_240365158.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2071016	2071330	.	+	.	ID=gene-PKHYL_RS11010;Name=PKHYL_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11010;old_locus_tag=PKHYL_27000
NZ_AP019516.1	GeneMarkS-2+	CDS	2071016	2071330	.	+	0	ID=cds-WP_240365159.1;Parent=gene-PKHYL_RS11010;Dbxref=Genbank:WP_240365159.1;Name=WP_240365159.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11010;product=hypothetical protein;protein_id=WP_240365159.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2071365	2073098	.	+	.	ID=gene-PKHYL_RS11015;Name=PKHYL_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11015;old_locus_tag=PKHYL_27010
NZ_AP019516.1	Protein Homology	CDS	2071365	2073098	.	+	0	ID=cds-WP_240365160.1;Parent=gene-PKHYL_RS11015;Dbxref=Genbank:WP_240365160.1;Name=WP_240365160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672279.1;locus_tag=PKHYL_RS11015;product=transposase;protein_id=WP_240365160.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2073110	2074297	.	+	.	ID=gene-PKHYL_RS11020;Name=PKHYL_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11020;old_locus_tag=PKHYL_27020
NZ_AP019516.1	Protein Homology	CDS	2073110	2074297	.	+	0	ID=cds-WP_240365161.1;Parent=gene-PKHYL_RS11020;Dbxref=Genbank:WP_240365161.1;Name=WP_240365161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672278.1;locus_tag=PKHYL_RS11020;product=AAA family ATPase;protein_id=WP_240365161.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2074319	2074600	.	+	.	ID=gene-PKHYL_RS17670;Name=PKHYL_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17670;old_locus_tag=PKHYL_27030
NZ_AP019516.1	Protein Homology	CDS	2074319	2074600	.	+	0	ID=cds-WP_269778163.1;Parent=gene-PKHYL_RS17670;Dbxref=Genbank:WP_269778163.1;Name=WP_269778163.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022807.2;locus_tag=PKHYL_RS17670;product=DUF3164 family protein;protein_id=WP_269778163.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2074581	2074952	.	+	.	ID=gene-PKHYL_RS17675;Name=PKHYL_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17675;old_locus_tag=PKHYL_27040
NZ_AP019516.1	Protein Homology	CDS	2074581	2074952	.	+	0	ID=cds-WP_269778164.1;Parent=gene-PKHYL_RS17675;Dbxref=Genbank:WP_269778164.1;Name=WP_269778164.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022807.2;locus_tag=PKHYL_RS17675;product=DUF3164 family protein;protein_id=WP_269778164.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2074963	2075235	.	+	.	ID=gene-PKHYL_RS11030;Name=PKHYL_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11030;old_locus_tag=PKHYL_27050
NZ_AP019516.1	GeneMarkS-2+	CDS	2074963	2075235	.	+	0	ID=cds-WP_240365162.1;Parent=gene-PKHYL_RS11030;Dbxref=Genbank:WP_240365162.1;Name=WP_240365162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11030;product=hypothetical protein;protein_id=WP_240365162.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2075286	2075559	.	+	.	ID=gene-PKHYL_RS11035;Name=PKHYL_RS11035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS11035;old_locus_tag=PKHYL_27060;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2075286	2075559	.	+	0	ID=cds-PKHYL_RS11035;Parent=gene-PKHYL_RS11035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199383.1;locus_tag=PKHYL_RS11035;product=HU family DNA-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2075604	2075885	.	+	.	ID=gene-PKHYL_RS11040;Name=PKHYL_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11040;old_locus_tag=PKHYL_27070
NZ_AP019516.1	Protein Homology	CDS	2075604	2075885	.	+	0	ID=cds-WP_240365163.1;Parent=gene-PKHYL_RS11040;Dbxref=Genbank:WP_240365163.1;Name=WP_240365163.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025245.2;locus_tag=PKHYL_RS11040;product=Gp49 family protein;protein_id=WP_240365163.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2075973	2076683	.	+	.	ID=gene-PKHYL_RS11045;Name=PKHYL_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11045;old_locus_tag=PKHYL_27080
NZ_AP019516.1	Protein Homology	CDS	2075973	2076683	.	+	0	ID=cds-WP_240365164.1;Parent=gene-PKHYL_RS11045;Dbxref=Genbank:WP_240365164.1;Name=WP_240365164.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022432.2;locus_tag=PKHYL_RS11045;product=DUF2786 domain-containing protein;protein_id=WP_240365164.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2076694	2077143	.	+	.	ID=gene-PKHYL_RS11050;Name=PKHYL_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11050;old_locus_tag=PKHYL_27100
NZ_AP019516.1	Protein Homology	CDS	2076694	2077143	.	+	0	ID=cds-WP_240365165.1;Parent=gene-PKHYL_RS11050;Dbxref=Genbank:WP_240365165.1;Name=WP_240365165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672276.1;locus_tag=PKHYL_RS11050;product=regulatory protein GemA;protein_id=WP_240365165.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2077241	2077609	.	+	.	ID=gene-PKHYL_RS11055;Name=PKHYL_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11055;old_locus_tag=PKHYL_27110
NZ_AP019516.1	Protein Homology	CDS	2077241	2077609	.	+	0	ID=cds-WP_240365166.1;Parent=gene-PKHYL_RS11055;Dbxref=Genbank:WP_240365166.1;Name=WP_240365166.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020345.2;locus_tag=PKHYL_RS11055;product=hypothetical protein;protein_id=WP_240365166.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2077822	2077956	.	+	.	ID=gene-PKHYL_RS11060;Name=PKHYL_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11060;old_locus_tag=PKHYL_27120
NZ_AP019516.1	Protein Homology	CDS	2077822	2077956	.	+	0	ID=cds-WP_208855952.1;Parent=gene-PKHYL_RS11060;Dbxref=Genbank:WP_208855952.1;Name=WP_208855952.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038354.1;locus_tag=PKHYL_RS11060;product=putative transporter small subunit;protein_id=WP_208855952.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2078133	2078206	.	+	.	ID=gene-PKHYL_RS11065;Name=PKHYL_RS11065;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS11065;old_locus_tag=PKHYL_t00270
NZ_AP019516.1	tRNAscan-SE	tRNA	2078133	2078206	.	+	.	ID=rna-PKHYL_RS11065;Parent=gene-PKHYL_RS11065;anticodon=(pos:2078165..2078167);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS11065;product=tRNA-Cys
NZ_AP019516.1	tRNAscan-SE	exon	2078133	2078206	.	+	.	ID=exon-PKHYL_RS11065-1;Parent=rna-PKHYL_RS11065;anticodon=(pos:2078165..2078167);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS11065;product=tRNA-Cys
NZ_AP019516.1	RefSeq	gene	2078331	2078417	.	+	.	ID=gene-PKHYL_RS11070;Name=PKHYL_RS11070;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS11070;old_locus_tag=PKHYL_t00280
NZ_AP019516.1	tRNAscan-SE	tRNA	2078331	2078417	.	+	.	ID=rna-PKHYL_RS11070;Parent=gene-PKHYL_RS11070;anticodon=(pos:2078365..2078367);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS11070;product=tRNA-Leu
NZ_AP019516.1	tRNAscan-SE	exon	2078331	2078417	.	+	.	ID=exon-PKHYL_RS11070-1;Parent=rna-PKHYL_RS11070;anticodon=(pos:2078365..2078367);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS11070;product=tRNA-Leu
NZ_AP019516.1	RefSeq	gene	2078501	2078800	.	-	.	ID=gene-PKHYL_RS11075;Name=PKHYL_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11075;old_locus_tag=PKHYL_27130
NZ_AP019516.1	Protein Homology	CDS	2078501	2078800	.	-	0	ID=cds-WP_071003550.1;Parent=gene-PKHYL_RS11075;Dbxref=Genbank:WP_071003550.1;Name=WP_071003550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017816552.1;locus_tag=PKHYL_RS11075;product=hypothetical protein;protein_id=WP_071003550.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2078797	2079000	.	-	.	ID=gene-PKHYL_RS11080;Name=PKHYL_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11080;old_locus_tag=PKHYL_27140
NZ_AP019516.1	GeneMarkS-2+	CDS	2078797	2079000	.	-	0	ID=cds-WP_240365167.1;Parent=gene-PKHYL_RS11080;Dbxref=Genbank:WP_240365167.1;Name=WP_240365167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11080;product=hypothetical protein;protein_id=WP_240365167.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2079099	2079602	.	-	.	ID=gene-PKHYL_RS11085;Name=PKHYL_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11085;old_locus_tag=PKHYL_27150
NZ_AP019516.1	Protein Homology	CDS	2079099	2079602	.	-	0	ID=cds-WP_240365168.1;Parent=gene-PKHYL_RS11085;Dbxref=Genbank:WP_240365168.1;Name=WP_240365168.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018938.2;locus_tag=PKHYL_RS11085;product=DUF1446 domain-containing protein;protein_id=WP_240365168.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2079560	2080072	.	-	.	ID=gene-PKHYL_RS11090;Name=PKHYL_RS11090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS11090;old_locus_tag=PKHYL_27160;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2079560	2080072	.	-	0	ID=cds-PKHYL_RS11090;Parent=gene-PKHYL_RS11090;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018938.2;locus_tag=PKHYL_RS11090;product=acyclic terpene utilization AtuA family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2080164	2081452	.	-	.	ID=gene-PKHYL_RS11095;Name=PKHYL_RS11095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS11095;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2080164	2081452	.	-	0	ID=cds-PKHYL_RS11095;Parent=gene-PKHYL_RS11095;Note=frameshifted;Ontology_term=GO:0015746,GO:0015137,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=citrate transmembrane transporter activity|0015137||IEA;go_process=citrate transport|0015746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016541404.1;locus_tag=PKHYL_RS11095;product=citrate:proton symporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2081966	2082409	.	-	.	ID=gene-PKHYL_RS11100;Name=PKHYL_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11100;old_locus_tag=PKHYL_27210
NZ_AP019516.1	Protein Homology	CDS	2081966	2082409	.	-	0	ID=cds-WP_240365169.1;Parent=gene-PKHYL_RS11100;Dbxref=Genbank:WP_240365169.1;Name=WP_240365169.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012382.2;locus_tag=PKHYL_RS11100;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_240365169.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2082375	2082980	.	-	.	ID=gene-PKHYL_RS11105;Name=PKHYL_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11105;old_locus_tag=PKHYL_27220
NZ_AP019516.1	GeneMarkS-2+	CDS	2082375	2082980	.	-	0	ID=cds-WP_240365170.1;Parent=gene-PKHYL_RS11105;Dbxref=Genbank:WP_240365170.1;Name=WP_240365170.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11105;product=hypothetical protein;protein_id=WP_240365170.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2082931	2083242	.	-	.	ID=gene-PKHYL_RS11110;Name=PKHYL_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11110;old_locus_tag=PKHYL_27230
NZ_AP019516.1	Protein Homology	CDS	2082931	2083242	.	-	0	ID=cds-WP_240365171.1;Parent=gene-PKHYL_RS11110;Dbxref=Genbank:WP_240365171.1;Name=WP_240365171.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012610.2;locus_tag=PKHYL_RS11110;product=winged helix-turn-helix domain-containing protein;protein_id=WP_240365171.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2083574	2085203	.	-	.	ID=gene-PKHYL_RS11115;Name=PKHYL_RS11115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS11115;old_locus_tag=PKHYL_27240;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2083574	2085203	.	-	0	ID=cds-PKHYL_RS11115;Parent=gene-PKHYL_RS11115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005150163.1;locus_tag=PKHYL_RS11115;product=long-chain fatty acid--CoA ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2085868	2086113	.	-	.	ID=gene-PKHYL_RS11120;Name=PKHYL_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11120;old_locus_tag=PKHYL_27250
NZ_AP019516.1	Protein Homology	CDS	2085868	2086113	.	-	0	ID=cds-WP_093068926.1;Parent=gene-PKHYL_RS11120;Dbxref=Genbank:WP_093068926.1;Name=WP_093068926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443706.1;locus_tag=PKHYL_RS11120;product=hypothetical protein;protein_id=WP_093068926.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2086181	2086432	.	-	.	ID=gene-PKHYL_RS11125;Name=PKHYL_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11125;old_locus_tag=PKHYL_27260
NZ_AP019516.1	GeneMarkS-2+	CDS	2086181	2086432	.	-	0	ID=cds-WP_058024156.1;Parent=gene-PKHYL_RS11125;Dbxref=Genbank:WP_058024156.1;Name=WP_058024156.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11125;product=hypothetical protein;protein_id=WP_058024156.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2086809	2087168	.	-	.	ID=gene-PKHYL_RS11130;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=PKHYL_RS11130;old_locus_tag=PKHYL_tm00010
NZ_AP019516.1	cmsearch	tmRNA	2086809	2087168	.	-	.	ID=rna-PKHYL_RS11130;Parent=gene-PKHYL_RS11130;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS11130;product=transfer-messenger RNA
NZ_AP019516.1	cmsearch	exon	2086809	2087168	.	-	.	ID=exon-PKHYL_RS11130-1;Parent=rna-PKHYL_RS11130;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS11130;product=transfer-messenger RNA
NZ_AP019516.1	RefSeq	gene	2087254	2087925	.	-	.	ID=gene-PKHYL_RS11135;Name=PKHYL_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11135;old_locus_tag=PKHYL_27270
NZ_AP019516.1	Protein Homology	CDS	2087254	2087925	.	-	0	ID=cds-WP_071003544.1;Parent=gene-PKHYL_RS11135;Dbxref=Genbank:WP_071003544.1;Name=WP_071003544.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513959.1;locus_tag=PKHYL_RS11135;product=dienelactone hydrolase family protein;protein_id=WP_071003544.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2088346	2089716	.	+	.	ID=gene-PKHYL_RS11140;Name=PKHYL_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11140;old_locus_tag=PKHYL_27280
NZ_AP019516.1	Protein Homology	CDS	2088346	2089716	.	+	0	ID=cds-WP_071003543.1;Parent=gene-PKHYL_RS11140;Dbxref=Genbank:WP_071003543.1;Name=WP_071003543.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513960.1;locus_tag=PKHYL_RS11140;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_071003543.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2089943	2090722	.	+	.	ID=gene-PKHYL_RS11145;Name=PKHYL_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11145;old_locus_tag=PKHYL_27290
NZ_AP019516.1	Protein Homology	CDS	2089943	2090722	.	+	0	ID=cds-WP_071003542.1;Parent=gene-PKHYL_RS11145;Dbxref=Genbank:WP_071003542.1;Name=WP_071003542.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199450.1;locus_tag=PKHYL_RS11145;product=response regulator;protein_id=WP_071003542.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2090739	2092364	.	+	.	ID=gene-PKHYL_RS11150;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=PKHYL_RS11150;old_locus_tag=PKHYL_27300
NZ_AP019516.1	Protein Homology	CDS	2090739	2092364	.	+	0	ID=cds-WP_240365172.1;Parent=gene-PKHYL_RS11150;Dbxref=Genbank:WP_240365172.1;Name=WP_240365172.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019671952.1;locus_tag=PKHYL_RS11150;product=two-component system sensor histidine kinase CreC;protein_id=WP_240365172.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2092364	2092510	.	+	.	ID=gene-PKHYL_RS11155;Name=PKHYL_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11155
NZ_AP019516.1	GeneMarkS-2+	CDS	2092364	2092510	.	+	0	ID=cds-WP_240365173.1;Parent=gene-PKHYL_RS11155;Dbxref=Genbank:WP_240365173.1;Name=WP_240365173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11155;product=hypothetical protein;protein_id=WP_240365173.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2092641	2092841	.	+	.	ID=gene-PKHYL_RS11160;Name=PKHYL_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11160;old_locus_tag=PKHYL_27310
NZ_AP019516.1	GeneMarkS-2+	CDS	2092641	2092841	.	+	0	ID=cds-WP_212563687.1;Parent=gene-PKHYL_RS11160;Dbxref=Genbank:WP_212563687.1;Name=WP_212563687.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11160;product=hypothetical protein;protein_id=WP_212563687.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2092975	2094078	.	-	.	ID=gene-PKHYL_RS11165;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=PKHYL_RS11165;old_locus_tag=PKHYL_27320
NZ_AP019516.1	Protein Homology	CDS	2092975	2094078	.	-	0	ID=cds-WP_071003539.1;Parent=gene-PKHYL_RS11165;Dbxref=Genbank:WP_071003539.1;Name=WP_071003539.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513961.1;locus_tag=PKHYL_RS11165;product=chorismate synthase;protein_id=WP_071003539.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2094182	2095357	.	-	.	ID=gene-PKHYL_RS11170;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=PKHYL_RS11170;old_locus_tag=PKHYL_27330
NZ_AP019516.1	Protein Homology	CDS	2094182	2095357	.	-	0	ID=cds-WP_071003538.1;Parent=gene-PKHYL_RS11170;Dbxref=Genbank:WP_071003538.1;Name=WP_071003538.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280722.1;locus_tag=PKHYL_RS11170;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_071003538.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2095697	2096392	.	+	.	ID=gene-PKHYL_RS11175;Name=PKHYL_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11175;old_locus_tag=PKHYL_27340
NZ_AP019516.1	GeneMarkS-2+	CDS	2095697	2096392	.	+	0	ID=cds-WP_240365174.1;Parent=gene-PKHYL_RS11175;Dbxref=Genbank:WP_240365174.1;Name=WP_240365174.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11175;product=hypothetical protein;protein_id=WP_240365174.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2096398	2096598	.	+	.	ID=gene-PKHYL_RS11180;Name=PKHYL_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11180;old_locus_tag=PKHYL_27350
NZ_AP019516.1	Protein Homology	CDS	2096398	2096598	.	+	0	ID=cds-WP_240365175.1;Parent=gene-PKHYL_RS11180;Dbxref=Genbank:WP_240365175.1;Name=WP_240365175.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013625.2;locus_tag=PKHYL_RS11180;product=hypothetical protein;protein_id=WP_240365175.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2096588	2097100	.	+	.	ID=gene-PKHYL_RS11185;Name=PKHYL_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11185;old_locus_tag=PKHYL_27360
NZ_AP019516.1	Protein Homology	CDS	2096588	2097100	.	+	0	ID=cds-WP_240365176.1;Parent=gene-PKHYL_RS11185;Dbxref=Genbank:WP_240365176.1;Name=WP_240365176.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015679.2;locus_tag=PKHYL_RS11185;product=L%2CD-transpeptidase;protein_id=WP_240365176.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2097261	2097473	.	-	.	ID=gene-PKHYL_RS11190;Name=PKHYL_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11190;old_locus_tag=PKHYL_27370
NZ_AP019516.1	Protein Homology	CDS	2097261	2097473	.	-	0	ID=cds-WP_071003537.1;Parent=gene-PKHYL_RS11190;Dbxref=Genbank:WP_071003537.1;Name=WP_071003537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443745.1;locus_tag=PKHYL_RS11190;product=hypothetical protein;protein_id=WP_071003537.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2097839	2098396	.	+	.	ID=gene-PKHYL_RS11195;Name=PKHYL_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11195;old_locus_tag=PKHYL_27380
NZ_AP019516.1	GeneMarkS-2+	CDS	2097839	2098396	.	+	0	ID=cds-WP_240365177.1;Parent=gene-PKHYL_RS11195;Dbxref=Genbank:WP_240365177.1;Name=WP_240365177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11195;product=hypothetical protein;protein_id=WP_240365177.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2098414	2098995	.	+	.	ID=gene-PKHYL_RS11200;Name=PKHYL_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11200;old_locus_tag=PKHYL_27390
NZ_AP019516.1	Protein Homology	CDS	2098414	2098995	.	+	0	ID=cds-WP_240365178.1;Parent=gene-PKHYL_RS11200;Dbxref=Genbank:WP_240365178.1;Name=WP_240365178.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016013.2;locus_tag=PKHYL_RS11200;product=DUF389 domain-containing protein;protein_id=WP_240365178.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2098958	2099476	.	+	.	ID=gene-PKHYL_RS11205;Name=PKHYL_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11205;old_locus_tag=PKHYL_27400
NZ_AP019516.1	GeneMarkS-2+	CDS	2098958	2099476	.	+	0	ID=cds-WP_240365179.1;Parent=gene-PKHYL_RS11205;Dbxref=Genbank:WP_240365179.1;Name=WP_240365179.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11205;product=hypothetical protein;protein_id=WP_240365179.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2099623	2102295	.	+	.	ID=gene-PKHYL_RS11210;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=pseudogene;locus_tag=PKHYL_RS11210;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2099623	2102295	.	+	0	ID=cds-PKHYL_RS11210;Parent=gene-PKHYL_RS11210;Note=frameshifted;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199429.1;locus_tag=PKHYL_RS11210;product=alanine--tRNA ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2102612	2103898	.	+	.	ID=gene-PKHYL_RS11215;Name=PKHYL_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11215;old_locus_tag=PKHYL_27430
NZ_AP019516.1	Protein Homology	CDS	2102612	2103898	.	+	0	ID=cds-WP_058024167.1;Parent=gene-PKHYL_RS11215;Dbxref=Genbank:WP_058024167.1;Name=WP_058024167.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199426.1;locus_tag=PKHYL_RS11215;product=aspartate kinase;protein_id=WP_058024167.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2104310	2104477	.	+	.	ID=gene-PKHYL_RS11220;Name=csrA;end_range=2104477,.;gbkey=Gene;gene=csrA;gene_biotype=pseudogene;locus_tag=PKHYL_RS11220;old_locus_tag=PKHYL_27440;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2104310	2104477	.	+	0	ID=cds-PKHYL_RS11220;Parent=gene-PKHYL_RS11220;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006109,GO:0006402,GO:0003723;end_range=2104477,.;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209449.1;locus_tag=PKHYL_RS11220;partial=true;product=carbon storage regulator CsrA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2104642	2105016	.	+	.	ID=gene-PKHYL_RS11225;Name=PKHYL_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11225;old_locus_tag=PKHYL_27450
NZ_AP019516.1	Protein Homology	CDS	2104642	2105016	.	+	0	ID=cds-WP_071003534.1;Parent=gene-PKHYL_RS11225;Dbxref=Genbank:WP_071003534.1;Name=WP_071003534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513967.1;locus_tag=PKHYL_RS11225;product=HopJ type III effector protein;protein_id=WP_071003534.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2105097	2105408	.	-	.	ID=gene-PKHYL_RS11230;Name=PKHYL_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11230;old_locus_tag=PKHYL_27460
NZ_AP019516.1	Protein Homology	CDS	2105097	2105408	.	-	0	ID=cds-WP_240365180.1;Parent=gene-PKHYL_RS11230;Dbxref=Genbank:WP_240365180.1;Name=WP_240365180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280730.1;locus_tag=PKHYL_RS11230;product=DUF1315 family protein;protein_id=WP_240365180.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2105492	2106400	.	-	.	ID=gene-PKHYL_RS11235;Name=PKHYL_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11235;old_locus_tag=PKHYL_27470
NZ_AP019516.1	Protein Homology	CDS	2105492	2106400	.	-	0	ID=cds-WP_237182806.1;Parent=gene-PKHYL_RS11235;Dbxref=Genbank:WP_237182806.1;Name=WP_237182806.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443747.1;locus_tag=PKHYL_RS11235;product=NAD(+) kinase;protein_id=WP_237182806.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2106769	2107491	.	+	.	ID=gene-PKHYL_RS11240;Name=PKHYL_RS11240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS11240;old_locus_tag=PKHYL_27490;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2106769	2107491	.	+	0	ID=cds-PKHYL_RS11240;Parent=gene-PKHYL_RS11240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280732.1;locus_tag=PKHYL_RS11240;product=Bax inhibitor-1/YccA family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2107592	2107837	.	-	.	ID=gene-PKHYL_RS11245;Name=PKHYL_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11245;old_locus_tag=PKHYL_27500
NZ_AP019516.1	GeneMarkS-2+	CDS	2107592	2107837	.	-	0	ID=cds-WP_240365181.1;Parent=gene-PKHYL_RS11245;Dbxref=Genbank:WP_240365181.1;Name=WP_240365181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11245;product=hypothetical protein;protein_id=WP_240365181.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2107821	2108450	.	-	.	ID=gene-PKHYL_RS11250;Name=PKHYL_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11250;old_locus_tag=PKHYL_27510
NZ_AP019516.1	Protein Homology	CDS	2107821	2108450	.	-	0	ID=cds-WP_240365182.1;Parent=gene-PKHYL_RS11250;Dbxref=Genbank:WP_240365182.1;Name=WP_240365182.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF012905.2;locus_tag=PKHYL_RS11250;product=HAD-IC family P-type ATPase;protein_id=WP_240365182.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2108429	2109253	.	-	.	ID=gene-PKHYL_RS11255;Name=PKHYL_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11255;old_locus_tag=PKHYL_27520
NZ_AP019516.1	Protein Homology	CDS	2108429	2109253	.	-	0	ID=cds-WP_240365183.1;Parent=gene-PKHYL_RS11255;Dbxref=Genbank:WP_240365183.1;Name=WP_240365183.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:TIGR01494.1;locus_tag=PKHYL_RS11255;product=HAD-IC family P-type ATPase;protein_id=WP_240365183.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2109367	2110388	.	-	.	ID=gene-PKHYL_RS11260;Name=PKHYL_RS11260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS11260;old_locus_tag=PKHYL_27540;partial=true;pseudo=true;start_range=.,2109367
NZ_AP019516.1	Protein Homology	CDS	2109367	2110388	.	-	0	ID=cds-PKHYL_RS11260;Parent=gene-PKHYL_RS11260;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960840.1;locus_tag=PKHYL_RS11260;partial=true;product=heavy metal translocating P-type ATPase metal-binding domain-containing protein;pseudo=true;start_range=.,2109367;transl_table=11
NZ_AP019516.1	RefSeq	gene	2110826	2111092	.	+	.	ID=gene-PKHYL_RS11265;Name=PKHYL_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11265
NZ_AP019516.1	GeneMarkS-2+	CDS	2110826	2111092	.	+	0	ID=cds-WP_240365184.1;Parent=gene-PKHYL_RS11265;Dbxref=Genbank:WP_240365184.1;Name=WP_240365184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11265;product=hypothetical protein;protein_id=WP_240365184.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2111100	2112725	.	+	.	ID=gene-PKHYL_RS11270;Name=PKHYL_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11270;old_locus_tag=PKHYL_27550
NZ_AP019516.1	Protein Homology	CDS	2111100	2112725	.	+	0	ID=cds-WP_240365185.1;Parent=gene-PKHYL_RS11270;Dbxref=Genbank:WP_240365185.1;Name=WP_240365185.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013100.2;locus_tag=PKHYL_RS11270;product=transglycosylase domain-containing protein;protein_id=WP_240365185.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2112722	2113114	.	+	.	ID=gene-PKHYL_RS11275;Name=PKHYL_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11275;old_locus_tag=PKHYL_27560
NZ_AP019516.1	GeneMarkS-2+	CDS	2112722	2113114	.	+	0	ID=cds-WP_240365186.1;Parent=gene-PKHYL_RS11275;Dbxref=Genbank:WP_240365186.1;Name=WP_240365186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11275;product=hypothetical protein;protein_id=WP_240365186.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2113128	2113331	.	+	.	ID=gene-PKHYL_RS11280;Name=PKHYL_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11280;old_locus_tag=PKHYL_27570
NZ_AP019516.1	GeneMarkS-2+	CDS	2113128	2113331	.	+	0	ID=cds-WP_240365187.1;Parent=gene-PKHYL_RS11280;Dbxref=Genbank:WP_240365187.1;Name=WP_240365187.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11280;product=hypothetical protein;protein_id=WP_240365187.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2113377	2114327	.	+	.	ID=gene-PKHYL_RS11285;Name=PKHYL_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11285;old_locus_tag=PKHYL_27580
NZ_AP019516.1	GeneMarkS-2+	CDS	2113377	2114327	.	+	0	ID=cds-WP_240365188.1;Parent=gene-PKHYL_RS11285;Dbxref=Genbank:WP_240365188.1;Name=WP_240365188.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11285;product=hypothetical protein;protein_id=WP_240365188.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2114258	2115184	.	+	.	ID=gene-PKHYL_RS11290;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=PKHYL_RS11290;old_locus_tag=PKHYL_27590
NZ_AP019516.1	Protein Homology	CDS	2114258	2115184	.	+	0	ID=cds-WP_071003526.1;Parent=gene-PKHYL_RS11290;Dbxref=Genbank:WP_071003526.1;Name=WP_071003526.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199392.1;locus_tag=PKHYL_RS11290;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_071003526.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2115395	2115952	.	+	.	ID=gene-PKHYL_RS11295;Name=PKHYL_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11295;old_locus_tag=PKHYL_27600
NZ_AP019516.1	Protein Homology	CDS	2115395	2115952	.	+	0	ID=cds-WP_240365189.1;Parent=gene-PKHYL_RS11295;Dbxref=Genbank:WP_240365189.1;Name=WP_240365189.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02098.1;locus_tag=PKHYL_RS11295;product=hypothetical protein;protein_id=WP_240365189.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2116017	2116571	.	+	.	ID=gene-PKHYL_RS11300;Name=PKHYL_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11300;old_locus_tag=PKHYL_27610
NZ_AP019516.1	Protein Homology	CDS	2116017	2116571	.	+	0	ID=cds-WP_240365190.1;Parent=gene-PKHYL_RS11300;Dbxref=Genbank:WP_240365190.1;Name=WP_240365190.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023334.2;locus_tag=PKHYL_RS11300;product=DUF3426 domain-containing protein;protein_id=WP_240365190.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2116819	2117082	.	+	.	ID=gene-PKHYL_RS11305;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=PKHYL_RS11305;old_locus_tag=PKHYL_27620
NZ_AP019516.1	Protein Homology	CDS	2116819	2117082	.	+	0	ID=cds-WP_227674247.1;Parent=gene-PKHYL_RS11305;Dbxref=Genbank:WP_227674247.1;Name=WP_227674247.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007116852.1;locus_tag=PKHYL_RS11305;product=DNA-binding transcriptional regulator Fis;protein_id=WP_227674247.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2117232	2118814	.	+	.	ID=gene-PKHYL_RS11310;Name=purH;gbkey=Gene;gene=purH;gene_biotype=pseudogene;locus_tag=PKHYL_RS11310;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2117232	2118814	.	+	0	ID=cds-PKHYL_RS11310;Parent=gene-PKHYL_RS11310;Note=frameshifted;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443755.1;locus_tag=PKHYL_RS11310;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2119278	2120048	.	-	.	ID=gene-PKHYL_RS11315;Name=PKHYL_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11315;old_locus_tag=PKHYL_27650
NZ_AP019516.1	GeneMarkS-2+	CDS	2119278	2120048	.	-	0	ID=cds-WP_240365191.1;Parent=gene-PKHYL_RS11315;Dbxref=Genbank:WP_240365191.1;Name=WP_240365191.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11315;product=hypothetical protein;protein_id=WP_240365191.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2120076	2121104	.	-	.	ID=gene-PKHYL_RS11320;Name=PKHYL_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11320;old_locus_tag=PKHYL_27660
NZ_AP019516.1	Protein Homology	CDS	2120076	2121104	.	-	0	ID=cds-WP_240365192.1;Parent=gene-PKHYL_RS11320;Dbxref=Genbank:WP_240365192.1;Name=WP_240365192.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025010.2;locus_tag=PKHYL_RS11320;product=SurA N-terminal domain-containing protein;protein_id=WP_240365192.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2121491	2121763	.	-	.	ID=gene-PKHYL_RS11325;Name=PKHYL_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11325;old_locus_tag=PKHYL_27670
NZ_AP019516.1	Protein Homology	CDS	2121491	2121763	.	-	0	ID=cds-WP_045445077.1;Parent=gene-PKHYL_RS11325;Dbxref=Genbank:WP_045445077.1;Name=WP_045445077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199383.1;locus_tag=PKHYL_RS11325;product=HU family DNA-binding protein;protein_id=WP_045445077.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2122269	2122454	.	+	.	ID=gene-PKHYL_RS11330;Name=PKHYL_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11330;old_locus_tag=PKHYL_27680
NZ_AP019516.1	GeneMarkS-2+	CDS	2122269	2122454	.	+	0	ID=cds-WP_240365193.1;Parent=gene-PKHYL_RS11330;Dbxref=Genbank:WP_240365193.1;Name=WP_240365193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11330;product=hypothetical protein;protein_id=WP_240365193.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2122471	2122914	.	+	.	ID=gene-PKHYL_RS11335;Name=PKHYL_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11335;old_locus_tag=PKHYL_27690
NZ_AP019516.1	GeneMarkS-2+	CDS	2122471	2122914	.	+	0	ID=cds-WP_240365194.1;Parent=gene-PKHYL_RS11335;Dbxref=Genbank:WP_240365194.1;Name=WP_240365194.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11335;product=hypothetical protein;protein_id=WP_240365194.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2123384	2123893	.	+	.	ID=gene-PKHYL_RS11340;Name=PKHYL_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11340;old_locus_tag=PKHYL_27700
NZ_AP019516.1	Protein Homology	CDS	2123384	2123893	.	+	0	ID=cds-WP_071003521.1;Parent=gene-PKHYL_RS11340;Dbxref=Genbank:WP_071003521.1;Name=WP_071003521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280742.1;locus_tag=PKHYL_RS11340;product=Rrf2 family transcriptional regulator;protein_id=WP_071003521.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2123890	2125116	.	+	.	ID=gene-PKHYL_RS11345;Name=PKHYL_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11345;old_locus_tag=PKHYL_27710
NZ_AP019516.1	Protein Homology	CDS	2123890	2125116	.	+	0	ID=cds-WP_071003520.1;Parent=gene-PKHYL_RS11345;Dbxref=Genbank:WP_071003520.1;Name=WP_071003520.1;Ontology_term=GO:0044571,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003665735.1;locus_tag=PKHYL_RS11345;product=IscS subfamily cysteine desulfurase;protein_id=WP_071003520.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2125286	2125696	.	+	.	ID=gene-PKHYL_RS11350;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=PKHYL_RS11350;old_locus_tag=PKHYL_27720
NZ_AP019516.1	Protein Homology	CDS	2125286	2125696	.	+	0	ID=cds-WP_058024183.1;Parent=gene-PKHYL_RS11350;Dbxref=Genbank:WP_058024183.1;Name=WP_058024183.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199375.1;locus_tag=PKHYL_RS11350;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_058024183.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2125919	2126238	.	+	.	ID=gene-PKHYL_RS11355;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=pseudogene;locus_tag=PKHYL_RS11355;old_locus_tag=PKHYL_27730;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2125919	2126238	.	+	0	ID=cds-PKHYL_RS11355;Parent=gene-PKHYL_RS11355;Note=frameshifted;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscA;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005178462.1;locus_tag=PKHYL_RS11355;product=iron-sulfur cluster assembly protein IscA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2126378	2126509	.	+	.	ID=gene-PKHYL_RS17680;Name=PKHYL_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17680;old_locus_tag=PKHYL_27740
NZ_AP019516.1	GeneMarkS-2+	CDS	2126378	2126509	.	+	0	ID=cds-WP_269778165.1;Parent=gene-PKHYL_RS17680;Dbxref=Genbank:WP_269778165.1;Name=WP_269778165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17680;product=hypothetical protein;protein_id=WP_269778165.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2126445	2126726	.	+	.	ID=gene-PKHYL_RS11360;Name=PKHYL_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11360
NZ_AP019516.1	GeneMarkS-2+	CDS	2126445	2126726	.	+	0	ID=cds-WP_240365195.1;Parent=gene-PKHYL_RS11360;Dbxref=Genbank:WP_240365195.1;Name=WP_240365195.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11360;product=hypothetical protein;protein_id=WP_240365195.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2126713	2126961	.	+	.	ID=gene-PKHYL_RS11365;Name=PKHYL_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11365;old_locus_tag=PKHYL_27750
NZ_AP019516.1	Protein Homology	CDS	2126713	2126961	.	+	0	ID=cds-WP_240365196.1;Parent=gene-PKHYL_RS11365;Dbxref=Genbank:WP_240365196.1;Name=WP_240365196.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019363.2;locus_tag=PKHYL_RS11365;product=hypothetical protein;protein_id=WP_240365196.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2127181	2129053	.	+	.	ID=gene-PKHYL_RS11370;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=pseudogene;locus_tag=PKHYL_RS11370;old_locus_tag=PKHYL_27760;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2127181	2129053	.	+	0	ID=cds-PKHYL_RS11370;Parent=gene-PKHYL_RS11370;Note=frameshifted;Ontology_term=GO:0006457,GO:0005515;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: protein motif:HMM:NF012242.2;locus_tag=PKHYL_RS11370;product=Fe-S protein assembly chaperone HscA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2129140	2129479	.	+	.	ID=gene-PKHYL_RS11375;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=pseudogene;locus_tag=PKHYL_RS11375;old_locus_tag=PKHYL_27780;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2129140	2129479	.	+	0	ID=cds-PKHYL_RS11375;Parent=gene-PKHYL_RS11375;Note=frameshifted;Ontology_term=GO:0016226;gbkey=CDS;gene=fdx;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004995265.1;locus_tag=PKHYL_RS11375;product=ISC system 2Fe-2S type ferredoxin;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2129580	2130779	.	-	.	ID=gene-PKHYL_RS11380;Name=PKHYL_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11380;old_locus_tag=PKHYL_27790
NZ_AP019516.1	Protein Homology	CDS	2129580	2130779	.	-	0	ID=cds-WP_240365197.1;Parent=gene-PKHYL_RS11380;Dbxref=Genbank:WP_240365197.1;Name=WP_240365197.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012437.2;locus_tag=PKHYL_RS11380;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_240365197.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2131338	2131769	.	-	.	ID=gene-PKHYL_RS11385;Name=PKHYL_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11385;old_locus_tag=PKHYL_27800
NZ_AP019516.1	Protein Homology	CDS	2131338	2131769	.	-	0	ID=cds-WP_057759208.1;Parent=gene-PKHYL_RS11385;Dbxref=Genbank:WP_057759208.1;Name=WP_057759208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280749.1;locus_tag=PKHYL_RS11385;product=HIT family protein;protein_id=WP_057759208.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2131938	2135648	.	-	.	ID=gene-PKHYL_RS11390;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=pseudogene;locus_tag=PKHYL_RS11390;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2131938	2135648	.	-	0	ID=cds-PKHYL_RS11390;Parent=gene-PKHYL_RS11390;Note=frameshifted;Ontology_term=GO:0006281,GO:0003690,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=mfd;go_function=double-stranded DNA binding|0003690||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443763.1;locus_tag=PKHYL_RS11390;product=transcription-repair coupling factor;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2135855	2136337	.	-	.	ID=gene-PKHYL_RS11395;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=PKHYL_RS11395;old_locus_tag=PKHYL_27860
NZ_AP019516.1	Protein Homology	CDS	2135855	2136337	.	-	0	ID=cds-WP_240366531.1;Parent=gene-PKHYL_RS11395;Dbxref=Genbank:WP_240366531.1;Name=WP_240366531.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019836481.1;locus_tag=PKHYL_RS11395;product=ribonuclease E activity regulator RraA;protein_id=WP_240366531.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2136602	2137168	.	-	.	ID=gene-PKHYL_RS11400;Name=PKHYL_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11400;old_locus_tag=PKHYL_27880
NZ_AP019516.1	Protein Homology	CDS	2136602	2137168	.	-	0	ID=cds-WP_240365198.1;Parent=gene-PKHYL_RS11400;Dbxref=Genbank:WP_240365198.1;Name=WP_240365198.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF013530.2;locus_tag=PKHYL_RS11400;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_240365198.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2137633	2137899	.	+	.	ID=gene-PKHYL_RS11405;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=PKHYL_RS11405;old_locus_tag=PKHYL_27890
NZ_AP019516.1	Protein Homology	CDS	2137633	2137899	.	+	0	ID=cds-WP_071003512.1;Parent=gene-PKHYL_RS11405;Dbxref=Genbank:WP_071003512.1;Name=WP_071003512.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513993.1;locus_tag=PKHYL_RS11405;product=30S ribosomal protein S20;protein_id=WP_071003512.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2138041	2138876	.	-	.	ID=gene-PKHYL_RS11410;Name=PKHYL_RS11410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS11410;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2138041	2138876	.	-	0	ID=cds-PKHYL_RS11410;Parent=gene-PKHYL_RS11410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443766.1;locus_tag=PKHYL_RS11410;product=histidine phosphatase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2139031	2139612	.	-	.	ID=gene-PKHYL_RS11415;Name=PKHYL_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11415;old_locus_tag=PKHYL_27920
NZ_AP019516.1	Protein Homology	CDS	2139031	2139612	.	-	0	ID=cds-WP_240365199.1;Parent=gene-PKHYL_RS11415;Dbxref=Genbank:WP_240365199.1;Name=WP_240365199.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012376.2;locus_tag=PKHYL_RS11415;product=metallophosphoesterase;protein_id=WP_240365199.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2139635	2139829	.	-	.	ID=gene-PKHYL_RS11420;Name=PKHYL_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11420;old_locus_tag=PKHYL_27930
NZ_AP019516.1	GeneMarkS-2+	CDS	2139635	2139829	.	-	0	ID=cds-WP_240365200.1;Parent=gene-PKHYL_RS11420;Dbxref=Genbank:WP_240365200.1;Name=WP_240365200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11420;product=hypothetical protein;protein_id=WP_240365200.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2140042	2140740	.	-	.	ID=gene-PKHYL_RS11425;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=PKHYL_RS11425;old_locus_tag=PKHYL_27940
NZ_AP019516.1	Protein Homology	CDS	2140042	2140740	.	-	0	ID=cds-WP_093068898.1;Parent=gene-PKHYL_RS11425;Dbxref=Genbank:WP_093068898.1;Name=WP_093068898.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513996.1;locus_tag=PKHYL_RS11425;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_093068898.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2140814	2141221	.	-	.	ID=gene-PKHYL_RS11430;Name=PKHYL_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11430;old_locus_tag=PKHYL_27950
NZ_AP019516.1	Protein Homology	CDS	2140814	2141221	.	-	0	ID=cds-WP_093068896.1;Parent=gene-PKHYL_RS11430;Dbxref=Genbank:WP_093068896.1;Name=WP_093068896.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200115.1;locus_tag=PKHYL_RS11430;product=lipopolysaccharide assembly protein LapA domain-containing protein;protein_id=WP_093068896.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2141279	2141583	.	-	.	ID=gene-PKHYL_RS11435;Name=PKHYL_RS11435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS11435;old_locus_tag=PKHYL_27960;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2141279	2141583	.	-	0	ID=cds-PKHYL_RS11435;Parent=gene-PKHYL_RS11435;Note=frameshifted;Ontology_term=GO:0006310,GO:0006355,GO:0003677,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200120.1;locus_tag=PKHYL_RS11435;product=integration host factor subunit beta;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2141892	2143579	.	-	.	ID=gene-PKHYL_RS11440;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=pseudogene;locus_tag=PKHYL_RS11440;old_locus_tag=PKHYL_27970;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2141892	2143579	.	-	0	ID=cds-PKHYL_RS11440;Parent=gene-PKHYL_RS11440;Note=frameshifted;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443771.1;locus_tag=PKHYL_RS11440;product=30S ribosomal protein S1;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2143879	2144646	.	-	.	ID=gene-PKHYL_RS11445;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=PKHYL_RS11445;old_locus_tag=PKHYL_27980
NZ_AP019516.1	Protein Homology	CDS	2143879	2144646	.	-	0	ID=cds-WP_093068892.1;Parent=gene-PKHYL_RS11445;Dbxref=Genbank:WP_093068892.1;Name=WP_093068892.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280760.1;locus_tag=PKHYL_RS11445;product=(d)CMP kinase;protein_id=WP_093068892.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2144835	2145326	.	-	.	ID=gene-PKHYL_RS11450;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=PKHYL_RS11450;old_locus_tag=PKHYL_27990
NZ_AP019516.1	Protein Homology	CDS	2144835	2145326	.	-	0	ID=cds-WP_227674246.1;Parent=gene-PKHYL_RS11450;Dbxref=Genbank:WP_227674246.1;Name=WP_227674246.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395211.1;locus_tag=PKHYL_RS11450;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_227674246.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2145408	2146147	.	-	.	ID=gene-PKHYL_RS11455;Name=PKHYL_RS11455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS11455;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2145408	2146147	.	-	0	ID=cds-PKHYL_RS11455;Parent=gene-PKHYL_RS11455;Note=frameshifted;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443774.1;locus_tag=PKHYL_RS11455;product=uracil-DNA glycosylase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2146463	2148858	.	-	.	ID=gene-PKHYL_RS11460;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=pseudogene;locus_tag=PKHYL_RS11460;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2146463	2148858	.	-	0	ID=cds-PKHYL_RS11460;Parent=gene-PKHYL_RS11460;Note=frameshifted;Ontology_term=GO:0006508,GO:0043335,GO:0004176,GO:0009368;gbkey=CDS;gene=clpA;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA;go_process=proteolysis|0006508||IEA,protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004279779.1%2CRefSeq:WP_009502123.1;locus_tag=PKHYL_RS11460;product=ATP-dependent Clp protease ATP-binding subunit ClpA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2149573	2149919	.	-	.	ID=gene-PKHYL_RS11465;Name=PKHYL_RS11465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS11465;old_locus_tag=PKHYL_28050;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2149573	2149919	.	-	0	ID=cds-PKHYL_RS11465;Parent=gene-PKHYL_RS11465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280764.1;locus_tag=PKHYL_RS11465;product=ATP-dependent Clp protease adaptor ClpS;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2150128	2150877	.	-	.	ID=gene-PKHYL_RS11470;Name=PKHYL_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11470;old_locus_tag=PKHYL_28060
NZ_AP019516.1	Protein Homology	CDS	2150128	2150877	.	-	0	ID=cds-WP_240365201.1;Parent=gene-PKHYL_RS11470;Dbxref=Genbank:WP_240365201.1;Name=WP_240365201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200138.1;locus_tag=PKHYL_RS11470;product=hypothetical protein;protein_id=WP_240365201.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2151098	2152164	.	-	.	ID=gene-PKHYL_RS11475;Name=argC;gbkey=Gene;gene=argC;gene_biotype=pseudogene;locus_tag=PKHYL_RS11475;old_locus_tag=PKHYL_28080;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2151098	2152164	.	-	0	ID=cds-PKHYL_RS11475;Parent=gene-PKHYL_RS11475;Note=frameshifted;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005107142.1;locus_tag=PKHYL_RS11475;product=N-acetyl-gamma-glutamyl-phosphate reductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2152380	2153515	.	-	.	ID=gene-PKHYL_RS11480;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=pseudogene;locus_tag=PKHYL_RS11480;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2152380	2153515	.	-	0	ID=cds-PKHYL_RS11480;Parent=gene-PKHYL_RS11480;Note=frameshifted;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200147.1;locus_tag=PKHYL_RS11480;product=uroporphyrinogen decarboxylase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2153645	2154816	.	-	.	ID=gene-PKHYL_RS11485;Name=proB;gbkey=Gene;gene=proB;gene_biotype=pseudogene;locus_tag=PKHYL_RS11485;old_locus_tag=PKHYL_28110;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2153645	2154816	.	-	0	ID=cds-PKHYL_RS11485;Parent=gene-PKHYL_RS11485;Note=frameshifted;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280768.1;locus_tag=PKHYL_RS11485;product=glutamate 5-kinase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2154895	2156100	.	-	.	ID=gene-PKHYL_RS11490;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=pseudogene;locus_tag=PKHYL_RS11490;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2154895	2156100	.	-	0	ID=cds-PKHYL_RS11490;Parent=gene-PKHYL_RS11490;Note=frameshifted;Ontology_term=GO:0042254,GO:0005525;gbkey=CDS;gene=cgtA;go_function=GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443779.1;locus_tag=PKHYL_RS11490;product=Obg family GTPase CgtA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2156390	2157831	.	-	.	ID=gene-PKHYL_RS11495;Name=PKHYL_RS11495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS11495;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2156390	2157831	.	-	0	ID=cds-PKHYL_RS11495;Parent=gene-PKHYL_RS11495;Note=frameshifted;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514009.1;locus_tag=PKHYL_RS11495;product=glyceraldehyde-3-phosphate dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2158176	2158597	.	-	.	ID=gene-PKHYL_RS11500;Name=PKHYL_RS11500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS11500;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2158176	2158597	.	-	0	ID=cds-PKHYL_RS11500;Parent=gene-PKHYL_RS11500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019819.2;locus_tag=PKHYL_RS11500;product=lipocalin family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2159793	2160905	.	-	.	ID=gene-PKHYL_RS11505;Name=PKHYL_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11505;old_locus_tag=PKHYL_28190
NZ_AP019516.1	Protein Homology	CDS	2159793	2160905	.	-	0	ID=cds-WP_240365202.1;Parent=gene-PKHYL_RS11505;Dbxref=Genbank:WP_240365202.1;Name=WP_240365202.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443782.1;locus_tag=PKHYL_RS11505;product=NUDIX domain-containing protein;protein_id=WP_240365202.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2161227	2161391	.	+	.	ID=gene-PKHYL_RS11510;Name=PKHYL_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11510;old_locus_tag=PKHYL_28200
NZ_AP019516.1	Protein Homology	CDS	2161227	2161391	.	+	0	ID=cds-WP_083328959.1;Parent=gene-PKHYL_RS11510;Dbxref=Genbank:WP_083328959.1;Name=WP_083328959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657438.1;locus_tag=PKHYL_RS11510;product=hemin uptake protein HemP;protein_id=WP_083328959.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2161525	2164395	.	-	.	ID=gene-PKHYL_RS11515;Name=PKHYL_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11515;old_locus_tag=PKHYL_28210
NZ_AP019516.1	Protein Homology	CDS	2161525	2164395	.	-	0	ID=cds-WP_240365203.1;Parent=gene-PKHYL_RS11515;Dbxref=Genbank:WP_240365203.1;Name=WP_240365203.1;Ontology_term=GO:0009306,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: protein motif:HMM:NF016260.2;locus_tag=PKHYL_RS11515;product=translocation/assembly module TamB domain-containing protein;protein_id=WP_240365203.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2164359	2166182	.	-	.	ID=gene-PKHYL_RS11520;Name=PKHYL_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11520;old_locus_tag=PKHYL_28220
NZ_AP019516.1	GeneMarkS-2+	CDS	2164359	2166182	.	-	0	ID=cds-WP_240365204.1;Parent=gene-PKHYL_RS11520;Dbxref=Genbank:WP_240365204.1;Name=WP_240365204.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11520;product=hypothetical protein;protein_id=WP_240365204.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2166149	2166517	.	-	.	ID=gene-PKHYL_RS11525;Name=PKHYL_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11525;old_locus_tag=PKHYL_28230
NZ_AP019516.1	GeneMarkS-2+	CDS	2166149	2166517	.	-	0	ID=cds-WP_240365205.1;Parent=gene-PKHYL_RS11525;Dbxref=Genbank:WP_240365205.1;Name=WP_240365205.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11525;product=hypothetical protein;protein_id=WP_240365205.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2166618	2167670	.	-	.	ID=gene-PKHYL_RS11530;Name=PKHYL_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11530;old_locus_tag=PKHYL_28240
NZ_AP019516.1	Protein Homology	CDS	2166618	2167670	.	-	0	ID=cds-WP_240365206.1;Parent=gene-PKHYL_RS11530;Dbxref=Genbank:WP_240365206.1;Name=WP_240365206.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: protein motif:HMM:NF013283.2;locus_tag=PKHYL_RS11530;product=BamA/TamA family outer membrane protein;protein_id=WP_240365206.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2167624	2169705	.	-	.	ID=gene-PKHYL_RS11535;Name=PKHYL_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11535;old_locus_tag=PKHYL_28250
NZ_AP019516.1	GeneMarkS-2+	CDS	2167624	2169705	.	-	0	ID=cds-WP_240365207.1;Parent=gene-PKHYL_RS11535;Dbxref=Genbank:WP_240365207.1;Name=WP_240365207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11535;product=hypothetical protein;protein_id=WP_240365207.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2169686	2170051	.	-	.	ID=gene-PKHYL_RS11540;Name=PKHYL_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11540;old_locus_tag=PKHYL_28260
NZ_AP019516.1	GeneMarkS-2+	CDS	2169686	2170051	.	-	0	ID=cds-WP_240365208.1;Parent=gene-PKHYL_RS11540;Dbxref=Genbank:WP_240365208.1;Name=WP_240365208.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11540;product=hypothetical protein;protein_id=WP_240365208.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2170504	2171836	.	+	.	ID=gene-PKHYL_RS11545;Name=PKHYL_RS11545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS11545;old_locus_tag=PKHYL_28270;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2170504	2171836	.	+	0	ID=cds-PKHYL_RS11545;Parent=gene-PKHYL_RS11545;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657442.1;locus_tag=PKHYL_RS11545;product=MFS transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2172026	2172663	.	+	.	ID=gene-PKHYL_RS11550;Name=coq7;gbkey=Gene;gene=coq7;gene_biotype=pseudogene;locus_tag=PKHYL_RS11550;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2172026	2172663	.	+	0	ID=cds-PKHYL_RS11550;Parent=gene-PKHYL_RS11550;Note=frameshifted;Ontology_term=GO:0006744,GO:0004497;gbkey=CDS;gene=coq7;go_function=monooxygenase activity|0004497||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004791519.1;locus_tag=PKHYL_RS11550;product=2-polyprenyl-3-methyl-6-methoxy-1%2C4-benzoquinone monooxygenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2172862	2174040	.	+	.	ID=gene-PKHYL_RS11555;Name=PKHYL_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11555;old_locus_tag=PKHYL_28310
NZ_AP019516.1	Protein Homology	CDS	2172862	2174040	.	+	0	ID=cds-WP_071003489.1;Parent=gene-PKHYL_RS11555;Dbxref=Genbank:WP_071003489.1;Name=WP_071003489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200184.1;locus_tag=PKHYL_RS11555;product=hypothetical protein;protein_id=WP_071003489.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2174411	2175130	.	+	.	ID=gene-PKHYL_RS11560;Name=PKHYL_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11560;old_locus_tag=PKHYL_28330
NZ_AP019516.1	GeneMarkS-2+	CDS	2174411	2175130	.	+	0	ID=cds-WP_240365209.1;Parent=gene-PKHYL_RS11560;Dbxref=Genbank:WP_240365209.1;Name=WP_240365209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11560;product=hypothetical protein;protein_id=WP_240365209.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2175232	2176878	.	+	.	ID=gene-PKHYL_RS11565;Name=PKHYL_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11565;old_locus_tag=PKHYL_28340
NZ_AP019516.1	Protein Homology	CDS	2175232	2176878	.	+	0	ID=cds-WP_240365210.1;Parent=gene-PKHYL_RS11565;Dbxref=Genbank:WP_240365210.1;Name=WP_240365210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927550.1;locus_tag=PKHYL_RS11565;product=hypothetical protein;protein_id=WP_240365210.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2177346	2178831	.	+	.	ID=gene-PKHYL_RS11570;Name=PKHYL_RS11570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS11570;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2177346	2178831	.	+	0	ID=cds-PKHYL_RS11570;Parent=gene-PKHYL_RS11570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443790.1;locus_tag=PKHYL_RS11570;product=cytochrome ubiquinol oxidase subunit I;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2178831	2179847	.	+	.	ID=gene-PKHYL_RS11575;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=PKHYL_RS11575;old_locus_tag=PKHYL_28370
NZ_AP019516.1	Protein Homology	CDS	2178831	2179847	.	+	0	ID=cds-WP_071003483.1;Parent=gene-PKHYL_RS11575;Dbxref=Genbank:WP_071003483.1;Name=WP_071003483.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514020.1;locus_tag=PKHYL_RS11575;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_071003483.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2180277	2181010	.	-	.	ID=gene-PKHYL_RS11580;Name=PKHYL_RS11580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS11580;old_locus_tag=PKHYL_28380;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2180277	2181010	.	-	0	ID=cds-PKHYL_RS11580;Parent=gene-PKHYL_RS11580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280782.1;locus_tag=PKHYL_RS11580;product=nucleotidyltransferase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2181060	2182166	.	-	.	ID=gene-PKHYL_RS11585;Name=PKHYL_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11585;old_locus_tag=PKHYL_28400
NZ_AP019516.1	Protein Homology	CDS	2181060	2182166	.	-	0	ID=cds-WP_240365211.1;Parent=gene-PKHYL_RS11585;Dbxref=Genbank:WP_240365211.1;Name=WP_240365211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443794.1;locus_tag=PKHYL_RS11585;product=phosphotransferase;protein_id=WP_240365211.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2182555	2183103	.	+	.	ID=gene-PKHYL_RS11590;Name=PKHYL_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11590;old_locus_tag=PKHYL_28410
NZ_AP019516.1	GeneMarkS-2+	CDS	2182555	2183103	.	+	0	ID=cds-WP_240365212.1;Parent=gene-PKHYL_RS11590;Dbxref=Genbank:WP_240365212.1;Name=WP_240365212.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11590;product=hypothetical protein;protein_id=WP_240365212.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2183069	2183680	.	+	.	ID=gene-PKHYL_RS11595;Name=PKHYL_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11595;old_locus_tag=PKHYL_28420
NZ_AP019516.1	Protein Homology	CDS	2183069	2183680	.	+	0	ID=cds-WP_240365213.1;Parent=gene-PKHYL_RS11595;Dbxref=Genbank:WP_240365213.1;Name=WP_240365213.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015901.2;locus_tag=PKHYL_RS11595;product=hypothetical protein;protein_id=WP_240365213.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2183664	2185601	.	+	.	ID=gene-PKHYL_RS11600;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=PKHYL_RS11600;old_locus_tag=PKHYL_28430
NZ_AP019516.1	Protein Homology	CDS	2183664	2185601	.	+	0	ID=cds-WP_240365214.1;Parent=gene-PKHYL_RS11600;Dbxref=Genbank:WP_240365214.1;Name=WP_240365214.1;Ontology_term=GO:0010033,GO:0061024,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=response to organic substance|0010033||IEA,membrane organization|0061024||IEA;inference=COORDINATES: protein motif:HMM:NF016348.2;locus_tag=PKHYL_RS11600;product=LPS assembly protein LptD;protein_id=WP_240365214.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2185758	2186366	.	+	.	ID=gene-PKHYL_RS11605;Name=PKHYL_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11605;old_locus_tag=PKHYL_28440
NZ_AP019516.1	Protein Homology	CDS	2185758	2186366	.	+	0	ID=cds-WP_240365215.1;Parent=gene-PKHYL_RS11605;Dbxref=Genbank:WP_240365215.1;Name=WP_240365215.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025010.2;locus_tag=PKHYL_RS11605;product=SurA N-terminal domain-containing protein;protein_id=WP_240365215.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2186502	2187152	.	+	.	ID=gene-PKHYL_RS11610;Name=PKHYL_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11610;old_locus_tag=PKHYL_28450
NZ_AP019516.1	Protein Homology	CDS	2186502	2187152	.	+	0	ID=cds-WP_240365216.1;Parent=gene-PKHYL_RS11610;Dbxref=Genbank:WP_240365216.1;Name=WP_240365216.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025002.2;locus_tag=PKHYL_RS11610;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_240365216.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2187684	2188813	.	-	.	ID=gene-PKHYL_RS11615;Name=PKHYL_RS11615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS11615;old_locus_tag=PKHYL_28460;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2187684	2188813	.	-	0	ID=cds-PKHYL_RS11615;Parent=gene-PKHYL_RS11615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200201.1;locus_tag=PKHYL_RS11615;product=endonuclease/exonuclease/phosphatase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2189269	2190400	.	+	.	ID=gene-PKHYL_RS11620;Name=asd;gbkey=Gene;gene=asd;gene_biotype=pseudogene;locus_tag=PKHYL_RS11620;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2189269	2190400	.	+	0	ID=cds-PKHYL_RS11620;Parent=gene-PKHYL_RS11620;Note=frameshifted;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514026.1;locus_tag=PKHYL_RS11620;product=aspartate-semialdehyde dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2190502	2190813	.	-	.	ID=gene-PKHYL_RS11625;Name=PKHYL_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11625;old_locus_tag=PKHYL_28500
NZ_AP019516.1	Protein Homology	CDS	2190502	2190813	.	-	0	ID=cds-WP_071003469.1;Parent=gene-PKHYL_RS11625;Dbxref=Genbank:WP_071003469.1;Name=WP_071003469.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016705.2;locus_tag=PKHYL_RS11625;product=heme-binding protein;protein_id=WP_071003469.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2190914	2192065	.	+	.	ID=gene-PKHYL_RS11630;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=PKHYL_RS11630;old_locus_tag=PKHYL_28510
NZ_AP019516.1	Protein Homology	CDS	2190914	2192065	.	+	0	ID=cds-WP_071003467.1;Parent=gene-PKHYL_RS11630;Dbxref=Genbank:WP_071003467.1;Name=WP_071003467.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443802.1;locus_tag=PKHYL_RS11630;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_071003467.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2192188	2193539	.	-	.	ID=gene-PKHYL_RS11635;Name=PKHYL_RS11635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS11635;old_locus_tag=PKHYL_28530;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2192188	2193539	.	-	0	ID=cds-PKHYL_RS11635;Parent=gene-PKHYL_RS11635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514029.1;locus_tag=PKHYL_RS11635;product=sodium-dependent transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2193856	2194636	.	-	.	ID=gene-PKHYL_RS11640;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=pseudogene;locus_tag=PKHYL_RS11640;old_locus_tag=PKHYL_28550;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2193856	2194636	.	-	0	ID=cds-PKHYL_RS11640;Parent=gene-PKHYL_RS11640;Note=frameshifted;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009390301.1;locus_tag=PKHYL_RS11640;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2194810	2195347	.	-	.	ID=gene-PKHYL_RS11645;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=pseudogene;locus_tag=PKHYL_RS11645;old_locus_tag=PKHYL_28560;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2194810	2195347	.	-	0	ID=cds-PKHYL_RS11645;Parent=gene-PKHYL_RS11645;Note=frameshifted;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280792.1;locus_tag=PKHYL_RS11645;product=3-hydroxyacyl-ACP dehydratase FabZ;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2195400	2196415	.	-	.	ID=gene-PKHYL_RS11650;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=pseudogene;locus_tag=PKHYL_RS11650;old_locus_tag=PKHYL_28570;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2195400	2196415	.	-	0	ID=cds-PKHYL_RS11650;Parent=gene-PKHYL_RS11650;Note=frameshifted;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514032.1;locus_tag=PKHYL_RS11650;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2196562	2198977	.	-	.	ID=gene-PKHYL_RS11655;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=pseudogene;locus_tag=PKHYL_RS11655;old_locus_tag=PKHYL_28600;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2196562	2198977	.	-	0	ID=cds-PKHYL_RS11655;Parent=gene-PKHYL_RS11655;Note=frameshifted;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514033.1;locus_tag=PKHYL_RS11655;product=outer membrane protein assembly factor BamA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2199240	2200615	.	-	.	ID=gene-PKHYL_RS11660;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=pseudogene;locus_tag=PKHYL_RS11660;old_locus_tag=PKHYL_28610;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2199240	2200615	.	-	0	ID=cds-PKHYL_RS11660;Parent=gene-PKHYL_RS11660;Note=frameshifted;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280795.1;locus_tag=PKHYL_RS11660;product=RIP metalloprotease RseP;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2200763	2201971	.	-	.	ID=gene-PKHYL_RS11665;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=PKHYL_RS11665;old_locus_tag=PKHYL_28620
NZ_AP019516.1	Protein Homology	CDS	2200763	2201971	.	-	0	ID=cds-WP_071003456.1;Parent=gene-PKHYL_RS11665;Dbxref=Genbank:WP_071003456.1;Name=WP_071003456.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280796.1;locus_tag=PKHYL_RS11665;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_071003456.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2202142	2202951	.	-	.	ID=gene-PKHYL_RS11670;Name=PKHYL_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11670;old_locus_tag=PKHYL_28630
NZ_AP019516.1	Protein Homology	CDS	2202142	2202951	.	-	0	ID=cds-WP_071003455.1;Parent=gene-PKHYL_RS11670;Dbxref=Genbank:WP_071003455.1;Name=WP_071003455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514036.1;locus_tag=PKHYL_RS11670;product=phosphatidate cytidylyltransferase;protein_id=WP_071003455.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2203128	2203886	.	-	.	ID=gene-PKHYL_RS11675;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=PKHYL_RS11675;old_locus_tag=PKHYL_28650
NZ_AP019516.1	Protein Homology	CDS	2203128	2203886	.	-	0	ID=cds-WP_240365217.1;Parent=gene-PKHYL_RS11675;Dbxref=Genbank:WP_240365217.1;Name=WP_240365217.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200238.1;locus_tag=PKHYL_RS11675;product=polyprenyl diphosphate synthase;protein_id=WP_240365217.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2204160	2204711	.	-	.	ID=gene-PKHYL_RS11680;Name=frr;gbkey=Gene;gene=frr;gene_biotype=pseudogene;locus_tag=PKHYL_RS11680;old_locus_tag=PKHYL_28660;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2204160	2204711	.	-	0	ID=cds-PKHYL_RS11680;Parent=gene-PKHYL_RS11680;Note=frameshifted;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018679060.1;locus_tag=PKHYL_RS11680;product=ribosome recycling factor;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2204840	2205565	.	-	.	ID=gene-PKHYL_RS11685;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=PKHYL_RS11685;old_locus_tag=PKHYL_28680
NZ_AP019516.1	Protein Homology	CDS	2204840	2205565	.	-	0	ID=cds-WP_071003450.1;Parent=gene-PKHYL_RS11685;Dbxref=Genbank:WP_071003450.1;Name=WP_071003450.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961019.1;locus_tag=PKHYL_RS11685;product=UMP kinase;protein_id=WP_071003450.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2205738	2207333	.	-	.	ID=gene-PKHYL_RS11690;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=PKHYL_RS11690;old_locus_tag=PKHYL_28690
NZ_AP019516.1	Protein Homology	CDS	2205738	2207333	.	-	0	ID=cds-WP_240365218.1;Parent=gene-PKHYL_RS11690;Dbxref=Genbank:WP_240365218.1;Name=WP_240365218.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443809.1;locus_tag=PKHYL_RS11690;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_240365218.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2207469	2208839	.	+	.	ID=gene-PKHYL_RS11695;Name=PKHYL_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11695;old_locus_tag=PKHYL_28700
NZ_AP019516.1	Protein Homology	CDS	2207469	2208839	.	+	0	ID=cds-WP_240365219.1;Parent=gene-PKHYL_RS11695;Dbxref=Genbank:WP_240365219.1;Name=WP_240365219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443810.1;locus_tag=PKHYL_RS11695;product=ATP-binding protein;protein_id=WP_240365219.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2209048	2210676	.	+	.	ID=gene-PKHYL_RS11700;Name=PKHYL_RS11700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS11700;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2209048	2210676	.	+	0	ID=cds-PKHYL_RS11700;Parent=gene-PKHYL_RS11700;Note=frameshifted;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961022.1;locus_tag=PKHYL_RS11700;product=sigma 54-interacting transcriptional regulator;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2210897	2210981	.	+	.	ID=gene-PKHYL_RS11705;Name=PKHYL_RS11705;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS11705;old_locus_tag=PKHYL_t00290
NZ_AP019516.1	tRNAscan-SE	tRNA	2210897	2210981	.	+	.	ID=rna-PKHYL_RS11705;Parent=gene-PKHYL_RS11705;anticodon=(pos:2210931..2210933);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS11705;product=tRNA-Leu
NZ_AP019516.1	tRNAscan-SE	exon	2210897	2210981	.	+	.	ID=exon-PKHYL_RS11705-1;Parent=rna-PKHYL_RS11705;anticodon=(pos:2210931..2210933);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS11705;product=tRNA-Leu
NZ_AP019516.1	RefSeq	gene	2211387	2212400	.	-	.	ID=gene-PKHYL_RS11710;Name=PKHYL_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11710;old_locus_tag=PKHYL_28740
NZ_AP019516.1	Protein Homology	CDS	2211387	2212400	.	-	0	ID=cds-WP_240365220.1;Parent=gene-PKHYL_RS11710;Dbxref=Genbank:WP_240365220.1;Name=WP_240365220.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033004.0;locus_tag=PKHYL_RS11710;product=phage portal protein;protein_id=WP_240365220.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2212393	2213979	.	-	.	ID=gene-PKHYL_RS11715;Name=PKHYL_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11715;old_locus_tag=PKHYL_28750
NZ_AP019516.1	Protein Homology	CDS	2212393	2213979	.	-	0	ID=cds-WP_240365221.1;Parent=gene-PKHYL_RS11715;Dbxref=Genbank:WP_240365221.1;Name=WP_240365221.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033003.0;locus_tag=PKHYL_RS11715;product=terminase family protein;protein_id=WP_240365221.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2213963	2214082	.	-	.	ID=gene-PKHYL_RS11720;Name=PKHYL_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11720
NZ_AP019516.1	Protein Homology	CDS	2213963	2214082	.	-	0	ID=cds-WP_240365222.1;Parent=gene-PKHYL_RS11720;Dbxref=Genbank:WP_240365222.1;Name=WP_240365222.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017834.2;locus_tag=PKHYL_RS11720;product=hypothetical protein;protein_id=WP_240365222.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2214353	2215189	.	+	.	ID=gene-PKHYL_RS11725;Name=PKHYL_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11725;old_locus_tag=PKHYL_28760
NZ_AP019516.1	Protein Homology	CDS	2214353	2215189	.	+	0	ID=cds-WP_240365223.1;Parent=gene-PKHYL_RS11725;Dbxref=Genbank:WP_240365223.1;Name=WP_240365223.1;Ontology_term=GO:0019069;gbkey=CDS;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: protein motif:HMM:NF017716.2;locus_tag=PKHYL_RS11725;product=GPO family capsid scaffolding protein;protein_id=WP_240365223.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2215244	2215888	.	+	.	ID=gene-PKHYL_RS17685;Name=PKHYL_RS17685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17685;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2215244	2215888	.	+	0	ID=cds-PKHYL_RS17685;Parent=gene-PKHYL_RS17685;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016981.2;locus_tag=PKHYL_RS17685;product=P2 family phage major capsid protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2215885	2216259	.	+	.	ID=gene-PKHYL_RS17690;Name=PKHYL_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17690;old_locus_tag=PKHYL_28790
NZ_AP019516.1	Protein Homology	CDS	2215885	2216259	.	+	0	ID=cds-WP_269778166.1;Parent=gene-PKHYL_RS17690;Dbxref=Genbank:WP_269778166.1;Name=WP_269778166.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016981.2;locus_tag=PKHYL_RS17690;product=P2 family phage major capsid protein;protein_id=WP_269778166.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2216305	2217060	.	+	.	ID=gene-PKHYL_RS11735;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=PKHYL_RS11735;old_locus_tag=PKHYL_28800
NZ_AP019516.1	Protein Homology	CDS	2216305	2217060	.	+	0	ID=cds-WP_240365224.1;Parent=gene-PKHYL_RS11735;Dbxref=Genbank:WP_240365224.1;Name=WP_240365224.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: protein motif:HMM:NF017731.2;locus_tag=PKHYL_RS11735;product=phage terminase small subunit;protein_id=WP_240365224.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2217063	2217359	.	+	.	ID=gene-PKHYL_RS11740;Name=PKHYL_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11740;old_locus_tag=PKHYL_28810
NZ_AP019516.1	Protein Homology	CDS	2217063	2217359	.	+	0	ID=cds-WP_093071410.1;Parent=gene-PKHYL_RS11740;Dbxref=Genbank:WP_093071410.1;Name=WP_093071410.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025245.2;locus_tag=PKHYL_RS11740;product=Gp49 family protein;protein_id=WP_093071410.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2217466	2217918	.	+	.	ID=gene-PKHYL_RS11745;Name=PKHYL_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11745;old_locus_tag=PKHYL_28820
NZ_AP019516.1	Protein Homology	CDS	2217466	2217918	.	+	0	ID=cds-WP_240365225.1;Parent=gene-PKHYL_RS11745;Dbxref=Genbank:WP_240365225.1;Name=WP_240365225.1;Ontology_term=GO:0019069;gbkey=CDS;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: protein motif:HMM:NF017713.2;locus_tag=PKHYL_RS11745;product=head completion/stabilization protein;protein_id=WP_240365225.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2217918	2218124	.	+	.	ID=gene-PKHYL_RS11750;Name=PKHYL_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11750;old_locus_tag=PKHYL_28830
NZ_AP019516.1	Protein Homology	CDS	2217918	2218124	.	+	0	ID=cds-WP_093071408.1;Parent=gene-PKHYL_RS11750;Dbxref=Genbank:WP_093071408.1;Name=WP_093071408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379118.1;locus_tag=PKHYL_RS11750;product=tail protein X;protein_id=WP_093071408.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2218115	2218522	.	+	.	ID=gene-PKHYL_RS11755;Name=PKHYL_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11755;old_locus_tag=PKHYL_28840
NZ_AP019516.1	GeneMarkS-2+	CDS	2218115	2218522	.	+	0	ID=cds-WP_240365226.1;Parent=gene-PKHYL_RS11755;Dbxref=Genbank:WP_240365226.1;Name=WP_240365226.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11755;product=hypothetical protein;protein_id=WP_240365226.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2218509	2218838	.	+	.	ID=gene-PKHYL_RS11760;Name=PKHYL_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11760;old_locus_tag=PKHYL_28850
NZ_AP019516.1	GeneMarkS-2+	CDS	2218509	2218838	.	+	0	ID=cds-WP_240365227.1;Parent=gene-PKHYL_RS11760;Dbxref=Genbank:WP_240365227.1;Name=WP_240365227.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11760;product=hypothetical protein;protein_id=WP_240365227.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2218835	2219443	.	+	.	ID=gene-PKHYL_RS11765;Name=PKHYL_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11765;old_locus_tag=PKHYL_28860
NZ_AP019516.1	Protein Homology	CDS	2218835	2219443	.	+	0	ID=cds-WP_240365228.1;Parent=gene-PKHYL_RS11765;Dbxref=Genbank:WP_240365228.1;Name=WP_240365228.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023288.2;locus_tag=PKHYL_RS11765;product=N-acetylmuramidase family protein;protein_id=WP_240365228.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2219440	2219871	.	+	.	ID=gene-PKHYL_RS11770;Name=PKHYL_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11770;old_locus_tag=PKHYL_28870
NZ_AP019516.1	Protein Homology	CDS	2219440	2219871	.	+	0	ID=cds-WP_240365229.1;Parent=gene-PKHYL_RS11770;Dbxref=Genbank:WP_240365229.1;Name=WP_240365229.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018586.2;locus_tag=PKHYL_RS11770;product=phage tail protein;protein_id=WP_240365229.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2219874	2220317	.	+	.	ID=gene-PKHYL_RS11775;Name=PKHYL_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11775;old_locus_tag=PKHYL_28880
NZ_AP019516.1	Protein Homology	CDS	2219874	2220317	.	+	0	ID=cds-WP_240365230.1;Parent=gene-PKHYL_RS11775;Dbxref=Genbank:WP_240365230.1;Name=WP_240365230.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: protein motif:HMM:NF016927.2;locus_tag=PKHYL_RS11775;product=phage virion morphogenesis protein;protein_id=WP_240365230.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2220403	2221011	.	+	.	ID=gene-PKHYL_RS11780;Name=PKHYL_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11780;old_locus_tag=PKHYL_28890
NZ_AP019516.1	Protein Homology	CDS	2220403	2221011	.	+	0	ID=cds-WP_240365231.1;Parent=gene-PKHYL_RS11780;Dbxref=Genbank:WP_240365231.1;Name=WP_240365231.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:TIGR01644.1;locus_tag=PKHYL_RS11780;product=phage baseplate assembly protein V;protein_id=WP_240365231.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2221004	2221393	.	+	.	ID=gene-PKHYL_RS11785;Name=PKHYL_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11785;old_locus_tag=PKHYL_28900
NZ_AP019516.1	Protein Homology	CDS	2221004	2221393	.	+	0	ID=cds-WP_240365232.1;Parent=gene-PKHYL_RS11785;Dbxref=Genbank:WP_240365232.1;Name=WP_240365232.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016829.2;locus_tag=PKHYL_RS11785;product=GPW/gp25 family protein;protein_id=WP_240365232.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2221449	2221901	.	+	.	ID=gene-PKHYL_RS17695;Name=PKHYL_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17695;old_locus_tag=PKHYL_28910
NZ_AP019516.1	Protein Homology	CDS	2221449	2221901	.	+	0	ID=cds-WP_269778167.1;Parent=gene-PKHYL_RS17695;Dbxref=Genbank:WP_269778167.1;Name=WP_269778167.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016736.2;locus_tag=PKHYL_RS17695;product=baseplate J/gp47 family protein;protein_id=WP_269778167.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2221828	2222283	.	+	.	ID=gene-PKHYL_RS11790;Name=PKHYL_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11790;old_locus_tag=PKHYL_28920
NZ_AP019516.1	Protein Homology	CDS	2221828	2222283	.	+	0	ID=cds-WP_269778168.1;Parent=gene-PKHYL_RS11790;Dbxref=Genbank:WP_269778168.1;Name=WP_269778168.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016736.2;locus_tag=PKHYL_RS11790;product=baseplate J/gp47 family protein;protein_id=WP_269778168.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2222276	2222806	.	+	.	ID=gene-PKHYL_RS11795;Name=PKHYL_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11795;old_locus_tag=PKHYL_28930
NZ_AP019516.1	Protein Homology	CDS	2222276	2222806	.	+	0	ID=cds-WP_240365233.1;Parent=gene-PKHYL_RS11795;Dbxref=Genbank:WP_240365233.1;Name=WP_240365233.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: protein motif:HMM:NF021220.2;locus_tag=PKHYL_RS11795;product=phage tail protein I;protein_id=WP_240365233.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2222828	2223817	.	+	.	ID=gene-PKHYL_RS11800;Name=PKHYL_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11800;old_locus_tag=PKHYL_28940
NZ_AP019516.1	Protein Homology	CDS	2222828	2223817	.	+	0	ID=cds-WP_240365234.1;Parent=gene-PKHYL_RS11800;Dbxref=Genbank:WP_240365234.1;Name=WP_240365234.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023985.2;locus_tag=PKHYL_RS11800;product=phage tail protein;protein_id=WP_240365234.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2223854	2224489	.	+	.	ID=gene-PKHYL_RS11805;Name=PKHYL_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11805;old_locus_tag=PKHYL_28950
NZ_AP019516.1	GeneMarkS-2+	CDS	2223854	2224489	.	+	0	ID=cds-WP_240365235.1;Parent=gene-PKHYL_RS11805;Dbxref=Genbank:WP_240365235.1;Name=WP_240365235.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11805;product=hypothetical protein;protein_id=WP_240365235.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2224507	2224815	.	+	.	ID=gene-PKHYL_RS11810;Name=PKHYL_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11810;old_locus_tag=PKHYL_28960
NZ_AP019516.1	GeneMarkS-2+	CDS	2224507	2224815	.	+	0	ID=cds-WP_240365236.1;Parent=gene-PKHYL_RS11810;Dbxref=Genbank:WP_240365236.1;Name=WP_240365236.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11810;product=hypothetical protein;protein_id=WP_240365236.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2224826	2225803	.	+	.	ID=gene-PKHYL_RS11815;Name=PKHYL_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11815;old_locus_tag=PKHYL_28970
NZ_AP019516.1	GeneMarkS-2+	CDS	2224826	2225803	.	+	0	ID=cds-WP_240365237.1;Parent=gene-PKHYL_RS11815;Dbxref=Genbank:WP_240365237.1;Name=WP_240365237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11815;product=hypothetical protein;protein_id=WP_240365237.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2225847	2226386	.	+	.	ID=gene-PKHYL_RS11820;Name=PKHYL_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11820;old_locus_tag=PKHYL_28980
NZ_AP019516.1	GeneMarkS-2+	CDS	2225847	2226386	.	+	0	ID=cds-WP_240365238.1;Parent=gene-PKHYL_RS11820;Dbxref=Genbank:WP_240365238.1;Name=WP_240365238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11820;product=hypothetical protein;protein_id=WP_240365238.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2226399	2226998	.	+	.	ID=gene-PKHYL_RS11825;Name=PKHYL_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11825;old_locus_tag=PKHYL_28990
NZ_AP019516.1	Protein Homology	CDS	2226399	2226998	.	+	0	ID=cds-WP_240365239.1;Parent=gene-PKHYL_RS11825;Dbxref=Genbank:WP_240365239.1;Name=WP_240365239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444002.1;locus_tag=PKHYL_RS11825;product=phage tail protein;protein_id=WP_240365239.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2227037	2227564	.	+	.	ID=gene-PKHYL_RS11830;Name=PKHYL_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11830;old_locus_tag=PKHYL_29000
NZ_AP019516.1	Protein Homology	CDS	2227037	2227564	.	+	0	ID=cds-WP_240365240.1;Parent=gene-PKHYL_RS11830;Dbxref=Genbank:WP_240365240.1;Name=WP_240365240.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: protein motif:HMM:TIGR01611.1;locus_tag=PKHYL_RS11830;product=phage major tail tube protein;protein_id=WP_240365240.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2227647	2227973	.	+	.	ID=gene-PKHYL_RS11835;Name=PKHYL_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11835;old_locus_tag=PKHYL_29010
NZ_AP019516.1	Protein Homology	CDS	2227647	2227973	.	+	0	ID=cds-WP_240365241.1;Parent=gene-PKHYL_RS11835;Dbxref=Genbank:WP_240365241.1;Name=WP_240365241.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021614.2;locus_tag=PKHYL_RS11835;product=phage tail assembly protein;protein_id=WP_240365241.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2227982	2228098	.	+	.	ID=gene-PKHYL_RS11840;Name=PKHYL_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11840
NZ_AP019516.1	Protein Homology	CDS	2227982	2228098	.	+	0	ID=cds-WP_075106269.1;Parent=gene-PKHYL_RS11840;Dbxref=Genbank:WP_075106269.1;Name=WP_075106269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555837.1;locus_tag=PKHYL_RS11840;product=GpE family phage tail protein;protein_id=WP_075106269.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2228178	2230718	.	+	.	ID=gene-PKHYL_RS11845;Name=PKHYL_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11845;old_locus_tag=PKHYL_29020
NZ_AP019516.1	Protein Homology	CDS	2228178	2230718	.	+	0	ID=cds-WP_240365242.1;Parent=gene-PKHYL_RS11845;Dbxref=Genbank:WP_240365242.1;Name=WP_240365242.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: protein motif:HMM:TIGR01760.1;locus_tag=PKHYL_RS11845;product=phage tail tape measure protein;protein_id=WP_240365242.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2230739	2231164	.	+	.	ID=gene-PKHYL_RS11850;Name=PKHYL_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11850;old_locus_tag=PKHYL_29030
NZ_AP019516.1	Protein Homology	CDS	2230739	2231164	.	+	0	ID=cds-WP_240365243.1;Parent=gene-PKHYL_RS11850;Dbxref=Genbank:WP_240365243.1;Name=WP_240365243.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018674.2;locus_tag=PKHYL_RS11850;product=phage tail protein;protein_id=WP_240365243.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2231454	2232461	.	+	.	ID=gene-PKHYL_RS11855;Name=PKHYL_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11855;old_locus_tag=PKHYL_29050
NZ_AP019516.1	Protein Homology	CDS	2231454	2232461	.	+	0	ID=cds-WP_240365244.1;Parent=gene-PKHYL_RS11855;Dbxref=Genbank:WP_240365244.1;Name=WP_240365244.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017739.2;locus_tag=PKHYL_RS11855;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_240365244.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2232463	2232951	.	-	.	ID=gene-PKHYL_RS11860;Name=PKHYL_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11860;old_locus_tag=PKHYL_29060
NZ_AP019516.1	GeneMarkS-2+	CDS	2232463	2232951	.	-	0	ID=cds-WP_240365245.1;Parent=gene-PKHYL_RS11860;Dbxref=Genbank:WP_240365245.1;Name=WP_240365245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11860;product=hypothetical protein;protein_id=WP_240365245.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2232996	2233334	.	-	.	ID=gene-PKHYL_RS11865;Name=PKHYL_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11865;old_locus_tag=PKHYL_29070
NZ_AP019516.1	Protein Homology	CDS	2232996	2233334	.	-	0	ID=cds-WP_240365246.1;Parent=gene-PKHYL_RS11865;Dbxref=Genbank:WP_240365246.1;Name=WP_240365246.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022170.2;locus_tag=PKHYL_RS11865;product=DUF2511 domain-containing protein;protein_id=WP_240365246.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2233362	2233637	.	-	.	ID=gene-PKHYL_RS11870;Name=PKHYL_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11870;old_locus_tag=PKHYL_29080
NZ_AP019516.1	Protein Homology	CDS	2233362	2233637	.	-	0	ID=cds-WP_240365247.1;Parent=gene-PKHYL_RS11870;Dbxref=Genbank:WP_240365247.1;Name=WP_240365247.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000763623.1;locus_tag=PKHYL_RS11870;product=Arc family DNA-binding protein;protein_id=WP_240365247.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2233765	2233935	.	+	.	ID=gene-PKHYL_RS11875;Name=PKHYL_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11875;old_locus_tag=PKHYL_29090
NZ_AP019516.1	Protein Homology	CDS	2233765	2233935	.	+	0	ID=cds-WP_240365248.1;Parent=gene-PKHYL_RS11875;Dbxref=Genbank:WP_240365248.1;Name=WP_240365248.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005404992.1;locus_tag=PKHYL_RS11875;product=Arc family DNA-binding protein;protein_id=WP_240365248.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2233938	2234273	.	+	.	ID=gene-PKHYL_RS11880;Name=PKHYL_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11880;old_locus_tag=PKHYL_29100
NZ_AP019516.1	GeneMarkS-2+	CDS	2233938	2234273	.	+	0	ID=cds-WP_240365249.1;Parent=gene-PKHYL_RS11880;Dbxref=Genbank:WP_240365249.1;Name=WP_240365249.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11880;product=hypothetical protein;protein_id=WP_240365249.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2234275	2235132	.	+	.	ID=gene-PKHYL_RS11885;Name=PKHYL_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11885;old_locus_tag=PKHYL_29110
NZ_AP019516.1	Protein Homology	CDS	2234275	2235132	.	+	0	ID=cds-WP_240365250.1;Parent=gene-PKHYL_RS11885;Dbxref=Genbank:WP_240365250.1;Name=WP_240365250.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014548.2;locus_tag=PKHYL_RS11885;product=BRO family protein;protein_id=WP_240365250.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2235144	2235782	.	+	.	ID=gene-PKHYL_RS11890;Name=PKHYL_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11890;old_locus_tag=PKHYL_29120
NZ_AP019516.1	GeneMarkS-2+	CDS	2235144	2235782	.	+	0	ID=cds-WP_240365251.1;Parent=gene-PKHYL_RS11890;Dbxref=Genbank:WP_240365251.1;Name=WP_240365251.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11890;product=hypothetical protein;protein_id=WP_240365251.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2235838	2236290	.	-	.	ID=gene-PKHYL_RS11895;Name=PKHYL_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11895;old_locus_tag=PKHYL_29130
NZ_AP019516.1	GeneMarkS-2+	CDS	2235838	2236290	.	-	0	ID=cds-WP_240365252.1;Parent=gene-PKHYL_RS11895;Dbxref=Genbank:WP_240365252.1;Name=WP_240365252.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11895;product=helix-turn-helix transcriptional regulator;protein_id=WP_240365252.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2236410	2236610	.	+	.	ID=gene-PKHYL_RS11900;Name=PKHYL_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11900;old_locus_tag=PKHYL_29140
NZ_AP019516.1	GeneMarkS-2+	CDS	2236410	2236610	.	+	0	ID=cds-WP_240365253.1;Parent=gene-PKHYL_RS11900;Dbxref=Genbank:WP_240365253.1;Name=WP_240365253.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11900;product=hypothetical protein;protein_id=WP_240365253.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2236635	2236868	.	+	.	ID=gene-PKHYL_RS11905;Name=PKHYL_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11905;old_locus_tag=PKHYL_29150
NZ_AP019516.1	GeneMarkS-2+	CDS	2236635	2236868	.	+	0	ID=cds-WP_240365254.1;Parent=gene-PKHYL_RS11905;Dbxref=Genbank:WP_240365254.1;Name=WP_240365254.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11905;product=hypothetical protein;protein_id=WP_240365254.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2236905	2237066	.	+	.	ID=gene-PKHYL_RS11910;Name=PKHYL_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11910;old_locus_tag=PKHYL_29160
NZ_AP019516.1	GeneMarkS-2+	CDS	2236905	2237066	.	+	0	ID=cds-WP_240365255.1;Parent=gene-PKHYL_RS11910;Dbxref=Genbank:WP_240365255.1;Name=WP_240365255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11910;product=hypothetical protein;protein_id=WP_240365255.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2237079	2237270	.	+	.	ID=gene-PKHYL_RS11915;Name=PKHYL_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11915
NZ_AP019516.1	Protein Homology	CDS	2237079	2237270	.	+	0	ID=cds-WP_075106284.1;Parent=gene-PKHYL_RS11915;Dbxref=Genbank:WP_075106284.1;Name=WP_075106284.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016487.2;locus_tag=PKHYL_RS11915;product=ogr/Delta-like zinc finger family protein;protein_id=WP_075106284.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2237300	2237899	.	+	.	ID=gene-PKHYL_RS11920;Name=PKHYL_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11920;old_locus_tag=PKHYL_29170
NZ_AP019516.1	GeneMarkS-2+	CDS	2237300	2237899	.	+	0	ID=cds-WP_240365256.1;Parent=gene-PKHYL_RS11920;Dbxref=Genbank:WP_240365256.1;Name=WP_240365256.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11920;product=hypothetical protein;protein_id=WP_240365256.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2237890	2240046	.	+	.	ID=gene-PKHYL_RS11925;Name=PKHYL_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11925;old_locus_tag=PKHYL_29180
NZ_AP019516.1	Protein Homology	CDS	2237890	2240046	.	+	0	ID=cds-WP_240365257.1;Parent=gene-PKHYL_RS11925;Dbxref=Genbank:WP_240365257.1;Name=WP_240365257.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024755.2;locus_tag=PKHYL_RS11925;product=toprim domain-containing protein;protein_id=WP_240365257.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2240066	2240341	.	+	.	ID=gene-PKHYL_RS11930;Name=PKHYL_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11930;old_locus_tag=PKHYL_29190
NZ_AP019516.1	GeneMarkS-2+	CDS	2240066	2240341	.	+	0	ID=cds-WP_240365258.1;Parent=gene-PKHYL_RS11930;Dbxref=Genbank:WP_240365258.1;Name=WP_240365258.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11930;product=hypothetical protein;protein_id=WP_240365258.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2240402	2240575	.	+	.	ID=gene-PKHYL_RS11935;Name=PKHYL_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11935;old_locus_tag=PKHYL_29200
NZ_AP019516.1	GeneMarkS-2+	CDS	2240402	2240575	.	+	0	ID=cds-WP_240365259.1;Parent=gene-PKHYL_RS11935;Dbxref=Genbank:WP_240365259.1;Name=WP_240365259.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11935;product=hypothetical protein;protein_id=WP_240365259.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2240587	2240772	.	+	.	ID=gene-PKHYL_RS11940;Name=PKHYL_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11940;old_locus_tag=PKHYL_29210
NZ_AP019516.1	GeneMarkS-2+	CDS	2240587	2240772	.	+	0	ID=cds-WP_240365260.1;Parent=gene-PKHYL_RS11940;Dbxref=Genbank:WP_240365260.1;Name=WP_240365260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11940;product=hypothetical protein;protein_id=WP_240365260.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2240773	2241012	.	+	.	ID=gene-PKHYL_RS11945;Name=PKHYL_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11945;old_locus_tag=PKHYL_29220
NZ_AP019516.1	GeneMarkS-2+	CDS	2240773	2241012	.	+	0	ID=cds-WP_240365261.1;Parent=gene-PKHYL_RS11945;Dbxref=Genbank:WP_240365261.1;Name=WP_240365261.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11945;product=hypothetical protein;protein_id=WP_240365261.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2241047	2241304	.	+	.	ID=gene-PKHYL_RS11950;Name=PKHYL_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11950;old_locus_tag=PKHYL_29230
NZ_AP019516.1	GeneMarkS-2+	CDS	2241047	2241304	.	+	0	ID=cds-WP_240365262.1;Parent=gene-PKHYL_RS11950;Dbxref=Genbank:WP_240365262.1;Name=WP_240365262.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11950;product=hypothetical protein;protein_id=WP_240365262.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2241507	2241764	.	+	.	ID=gene-PKHYL_RS11955;Name=PKHYL_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11955;old_locus_tag=PKHYL_29250
NZ_AP019516.1	GeneMarkS-2+	CDS	2241507	2241764	.	+	0	ID=cds-WP_240365263.1;Parent=gene-PKHYL_RS11955;Dbxref=Genbank:WP_240365263.1;Name=WP_240365263.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11955;product=hypothetical protein;protein_id=WP_240365263.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2241766	2241963	.	+	.	ID=gene-PKHYL_RS11960;Name=PKHYL_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11960;old_locus_tag=PKHYL_29260
NZ_AP019516.1	Protein Homology	CDS	2241766	2241963	.	+	0	ID=cds-WP_093071453.1;Parent=gene-PKHYL_RS11960;Dbxref=Genbank:WP_093071453.1;Name=WP_093071453.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444027.1;locus_tag=PKHYL_RS11960;product=TraR/DksA C4-type zinc finger protein;protein_id=WP_093071453.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2241966	2242205	.	+	.	ID=gene-PKHYL_RS11965;Name=PKHYL_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11965;old_locus_tag=PKHYL_29270
NZ_AP019516.1	GeneMarkS-2+	CDS	2241966	2242205	.	+	0	ID=cds-WP_240365264.1;Parent=gene-PKHYL_RS11965;Dbxref=Genbank:WP_240365264.1;Name=WP_240365264.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11965;product=hypothetical protein;protein_id=WP_240365264.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2242597	2243607	.	+	.	ID=gene-PKHYL_RS11970;Name=PKHYL_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11970;old_locus_tag=PKHYL_29280
NZ_AP019516.1	Protein Homology	CDS	2242597	2243607	.	+	0	ID=cds-WP_240365265.1;Parent=gene-PKHYL_RS11970;Dbxref=Genbank:WP_240365265.1;Name=WP_240365265.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=PKHYL_RS11970;product=site-specific integrase;protein_id=WP_240365265.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2244241	2244936	.	-	.	ID=gene-PKHYL_RS11975;Name=PKHYL_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11975;old_locus_tag=PKHYL_29290
NZ_AP019516.1	Protein Homology	CDS	2244241	2244936	.	-	0	ID=cds-WP_240365266.1;Parent=gene-PKHYL_RS11975;Dbxref=Genbank:WP_240365266.1;Name=WP_240365266.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012298.2;locus_tag=PKHYL_RS11975;product=serine/threonine-protein kinase;protein_id=WP_240365266.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2245091	2245261	.	-	.	ID=gene-PKHYL_RS11980;Name=PKHYL_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11980
NZ_AP019516.1	GeneMarkS-2+	CDS	2245091	2245261	.	-	0	ID=cds-WP_240365267.1;Parent=gene-PKHYL_RS11980;Dbxref=Genbank:WP_240365267.1;Name=WP_240365267.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11980;product=hypothetical protein;protein_id=WP_240365267.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2245343	2246287	.	+	.	ID=gene-PKHYL_RS11985;Name=PKHYL_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11985;old_locus_tag=PKHYL_29300
NZ_AP019516.1	Protein Homology	CDS	2245343	2246287	.	+	0	ID=cds-WP_240365268.1;Parent=gene-PKHYL_RS11985;Dbxref=Genbank:WP_240365268.1;Name=WP_240365268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280805.1;locus_tag=PKHYL_RS11985;product=ATP-binding protein;protein_id=WP_240365268.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2246384	2247514	.	-	.	ID=gene-PKHYL_RS11990;Name=PKHYL_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11990;old_locus_tag=PKHYL_29310
NZ_AP019516.1	Protein Homology	CDS	2246384	2247514	.	-	0	ID=cds-WP_240365269.1;Parent=gene-PKHYL_RS11990;Dbxref=Genbank:WP_240365269.1;Name=WP_240365269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019671850.1;locus_tag=PKHYL_RS11990;product=ribonuclease Z;protein_id=WP_240365269.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2247913	2248056	.	-	.	ID=gene-PKHYL_RS11995;Name=PKHYL_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS11995;old_locus_tag=PKHYL_29330
NZ_AP019516.1	GeneMarkS-2+	CDS	2247913	2248056	.	-	0	ID=cds-WP_240365270.1;Parent=gene-PKHYL_RS11995;Dbxref=Genbank:WP_240365270.1;Name=WP_240365270.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS11995;product=hypothetical protein;protein_id=WP_240365270.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2248064	2248264	.	-	.	ID=gene-PKHYL_RS12000;Name=PKHYL_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12000;old_locus_tag=PKHYL_29340
NZ_AP019516.1	GeneMarkS-2+	CDS	2248064	2248264	.	-	0	ID=cds-WP_240365271.1;Parent=gene-PKHYL_RS12000;Dbxref=Genbank:WP_240365271.1;Name=WP_240365271.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12000;product=hypothetical protein;protein_id=WP_240365271.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2248252	2248581	.	-	.	ID=gene-PKHYL_RS12005;Name=PKHYL_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12005;old_locus_tag=PKHYL_29350
NZ_AP019516.1	Protein Homology	CDS	2248252	2248581	.	-	0	ID=cds-WP_240365272.1;Parent=gene-PKHYL_RS12005;Dbxref=Genbank:WP_240365272.1;Name=WP_240365272.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014816.2;locus_tag=PKHYL_RS12005;product=glutathione S-transferase;protein_id=WP_240365272.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2248878	2249435	.	-	.	ID=gene-PKHYL_RS12010;Name=PKHYL_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12010;old_locus_tag=PKHYL_29360
NZ_AP019516.1	GeneMarkS-2+	CDS	2248878	2249435	.	-	0	ID=cds-WP_240365273.1;Parent=gene-PKHYL_RS12010;Dbxref=Genbank:WP_240365273.1;Name=WP_240365273.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12010;product=hypothetical protein;protein_id=WP_240365273.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2249643	2250356	.	-	.	ID=gene-PKHYL_RS12015;Name=PKHYL_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12015;old_locus_tag=PKHYL_29370
NZ_AP019516.1	GeneMarkS-2+	CDS	2249643	2250356	.	-	0	ID=cds-WP_240365274.1;Parent=gene-PKHYL_RS12015;Dbxref=Genbank:WP_240365274.1;Name=WP_240365274.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12015;product=hypothetical protein;protein_id=WP_240365274.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2250334	2250714	.	-	.	ID=gene-PKHYL_RS12020;Name=PKHYL_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12020;old_locus_tag=PKHYL_29380
NZ_AP019516.1	GeneMarkS-2+	CDS	2250334	2250714	.	-	0	ID=cds-WP_240365275.1;Parent=gene-PKHYL_RS12020;Dbxref=Genbank:WP_240365275.1;Name=WP_240365275.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12020;product=hypothetical protein;protein_id=WP_240365275.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2250855	2253596	.	-	.	ID=gene-PKHYL_RS12025;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=PKHYL_RS12025;old_locus_tag=PKHYL_29390
NZ_AP019516.1	Protein Homology	CDS	2250855	2253596	.	-	0	ID=cds-WP_071003431.1;Parent=gene-PKHYL_RS12025;Dbxref=Genbank:WP_071003431.1;Name=WP_071003431.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393824.1;locus_tag=PKHYL_RS12025;product=DNA gyrase subunit A;protein_id=WP_071003431.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2254170	2254451	.	+	.	ID=gene-PKHYL_RS12030;Name=PKHYL_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12030;old_locus_tag=PKHYL_29400
NZ_AP019516.1	GeneMarkS-2+	CDS	2254170	2254451	.	+	0	ID=cds-WP_058025545.1;Parent=gene-PKHYL_RS12030;Dbxref=Genbank:WP_058025545.1;Name=WP_058025545.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12030;product=hypothetical protein;protein_id=WP_058025545.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2254508	2255359	.	+	.	ID=gene-PKHYL_RS12035;Name=PKHYL_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12035;old_locus_tag=PKHYL_29410
NZ_AP019516.1	Protein Homology	CDS	2254508	2255359	.	+	0	ID=cds-WP_071003429.1;Parent=gene-PKHYL_RS12035;Dbxref=Genbank:WP_071003429.1;Name=WP_071003429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200296.1;locus_tag=PKHYL_RS12035;product=methyltransferase domain-containing protein;protein_id=WP_071003429.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2255393	2256717	.	-	.	ID=gene-PKHYL_RS12040;Name=PKHYL_RS12040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12040;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2255393	2256717	.	-	0	ID=cds-PKHYL_RS12040;Parent=gene-PKHYL_RS12040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443820.1;locus_tag=PKHYL_RS12040;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2256832	2257554	.	-	.	ID=gene-PKHYL_RS12045;Name=PKHYL_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12045;old_locus_tag=PKHYL_29440
NZ_AP019516.1	GeneMarkS-2+	CDS	2256832	2257554	.	-	0	ID=cds-WP_240366572.1;Parent=gene-PKHYL_RS12045;Dbxref=Genbank:WP_240366572.1;Name=WP_240366572.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12045;product=hypothetical protein;protein_id=WP_240366572.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2257484	2258509	.	-	.	ID=gene-PKHYL_RS12050;Name=PKHYL_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12050;old_locus_tag=PKHYL_29450
NZ_AP019516.1	Protein Homology	CDS	2257484	2258509	.	-	0	ID=cds-WP_240365276.1;Parent=gene-PKHYL_RS12050;Dbxref=Genbank:WP_240365276.1;Name=WP_240365276.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012738.2;locus_tag=PKHYL_RS12050;product=iron ABC transporter permease;protein_id=WP_240365276.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2258694	2259065	.	-	.	ID=gene-PKHYL_RS17700;Name=PKHYL_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17700;old_locus_tag=PKHYL_29460
NZ_AP019516.1	Protein Homology	CDS	2258694	2259065	.	-	0	ID=cds-WP_269778169.1;Parent=gene-PKHYL_RS17700;Dbxref=Genbank:WP_269778169.1;Name=WP_269778169.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024808.2;locus_tag=PKHYL_RS17700;product=extracellular solute-binding protein;protein_id=WP_269778169.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2259059	2259802	.	-	.	ID=gene-PKHYL_RS17705;Name=PKHYL_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17705;old_locus_tag=PKHYL_29470
NZ_AP019516.1	Protein Homology	CDS	2259059	2259802	.	-	0	ID=cds-WP_269778170.1;Parent=gene-PKHYL_RS17705;Dbxref=Genbank:WP_269778170.1;Name=WP_269778170.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024921.2;locus_tag=PKHYL_RS17705;product=extracellular solute-binding protein;protein_id=WP_269778170.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2260360	2261082	.	-	.	ID=gene-PKHYL_RS12060;Name=PKHYL_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12060;old_locus_tag=PKHYL_29480
NZ_AP019516.1	Protein Homology	CDS	2260360	2261082	.	-	0	ID=cds-WP_071003423.1;Parent=gene-PKHYL_RS12060;Dbxref=Genbank:WP_071003423.1;Name=WP_071003423.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443823.1;locus_tag=PKHYL_RS12060;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_071003423.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2261079	2262104	.	-	.	ID=gene-PKHYL_RS12065;Name=PKHYL_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12065;old_locus_tag=PKHYL_29490
NZ_AP019516.1	Protein Homology	CDS	2261079	2262104	.	-	0	ID=cds-WP_269778171.1;Parent=gene-PKHYL_RS12065;Dbxref=Genbank:WP_269778171.1;Name=WP_269778171.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016311.2;locus_tag=PKHYL_RS12065;product=hypothetical protein;protein_id=WP_269778171.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2262124	2262246	.	-	.	ID=gene-PKHYL_RS17710;Name=PKHYL_RS17710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17710;partial=true;pseudo=true;start_range=.,2262124
NZ_AP019516.1	Protein Homology	CDS	2262124	2262246	.	-	0	ID=cds-PKHYL_RS17710;Parent=gene-PKHYL_RS17710;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016311.2;locus_tag=PKHYL_RS17710;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2262124;transl_table=11
NZ_AP019516.1	RefSeq	gene	2262224	2262397	.	-	.	ID=gene-PKHYL_RS17715;Name=PKHYL_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17715;old_locus_tag=PKHYL_29500
NZ_AP019516.1	Protein Homology	CDS	2262224	2262397	.	-	0	ID=cds-WP_269778172.1;Parent=gene-PKHYL_RS17715;Dbxref=Genbank:WP_269778172.1;Name=WP_269778172.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016311.2;locus_tag=PKHYL_RS17715;product=hypothetical protein;protein_id=WP_269778172.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2262418	2262681	.	-	.	ID=gene-PKHYL_RS12070;Name=PKHYL_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12070
NZ_AP019516.1	GeneMarkS-2+	CDS	2262418	2262681	.	-	0	ID=cds-WP_240365277.1;Parent=gene-PKHYL_RS12070;Dbxref=Genbank:WP_240365277.1;Name=WP_240365277.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12070;product=hypothetical protein;protein_id=WP_240365277.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2262801	2263082	.	-	.	ID=gene-PKHYL_RS12075;Name=PKHYL_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12075;old_locus_tag=PKHYL_29510
NZ_AP019516.1	Protein Homology	CDS	2262801	2263082	.	-	0	ID=cds-WP_240365278.1;Parent=gene-PKHYL_RS12075;Dbxref=Genbank:WP_240365278.1;Name=WP_240365278.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019843.2;locus_tag=PKHYL_RS12075;product=hypothetical protein;protein_id=WP_240365278.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2263066	2263755	.	-	.	ID=gene-PKHYL_RS12080;Name=PKHYL_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12080;old_locus_tag=PKHYL_29520
NZ_AP019516.1	GeneMarkS-2+	CDS	2263066	2263755	.	-	0	ID=cds-WP_240365279.1;Parent=gene-PKHYL_RS12080;Dbxref=Genbank:WP_240365279.1;Name=WP_240365279.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12080;product=hypothetical protein;protein_id=WP_240365279.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2263730	2264302	.	-	.	ID=gene-PKHYL_RS12085;Name=PKHYL_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12085;old_locus_tag=PKHYL_29530
NZ_AP019516.1	GeneMarkS-2+	CDS	2263730	2264302	.	-	0	ID=cds-WP_240365280.1;Parent=gene-PKHYL_RS12085;Dbxref=Genbank:WP_240365280.1;Name=WP_240365280.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12085;product=hypothetical protein;protein_id=WP_240365280.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2264412	2265941	.	-	.	ID=gene-PKHYL_RS12090;Name=PKHYL_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12090;old_locus_tag=PKHYL_29540
NZ_AP019516.1	Protein Homology	CDS	2264412	2265941	.	-	0	ID=cds-WP_227517156.1;Parent=gene-PKHYL_RS12090;Dbxref=Genbank:WP_227517156.1;Name=WP_227517156.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024491.2;locus_tag=PKHYL_RS12090;product=cardiolipin synthase;protein_id=WP_227517156.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2266473	2266548	.	+	.	ID=gene-PKHYL_RS12095;Name=PKHYL_RS12095;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS12095;old_locus_tag=PKHYL_t00300
NZ_AP019516.1	tRNAscan-SE	tRNA	2266473	2266548	.	+	.	ID=rna-PKHYL_RS12095;Parent=gene-PKHYL_RS12095;anticodon=(pos:2266506..2266508);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS12095;product=tRNA-Val
NZ_AP019516.1	tRNAscan-SE	exon	2266473	2266548	.	+	.	ID=exon-PKHYL_RS12095-1;Parent=rna-PKHYL_RS12095;anticodon=(pos:2266506..2266508);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS12095;product=tRNA-Val
NZ_AP019516.1	RefSeq	gene	2266602	2266678	.	+	.	ID=gene-PKHYL_RS12100;Name=PKHYL_RS12100;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS12100;old_locus_tag=PKHYL_t00310
NZ_AP019516.1	tRNAscan-SE	tRNA	2266602	2266678	.	+	.	ID=rna-PKHYL_RS12100;Parent=gene-PKHYL_RS12100;anticodon=(pos:2266636..2266638);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS12100;product=tRNA-Asp
NZ_AP019516.1	tRNAscan-SE	exon	2266602	2266678	.	+	.	ID=exon-PKHYL_RS12100-1;Parent=rna-PKHYL_RS12100;anticodon=(pos:2266636..2266638);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS12100;product=tRNA-Asp
NZ_AP019516.1	RefSeq	gene	2267345	2268277	.	-	.	ID=gene-PKHYL_RS12105;Name=PKHYL_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12105;old_locus_tag=PKHYL_29550
NZ_AP019516.1	Protein Homology	CDS	2267345	2268277	.	-	0	ID=cds-WP_269778173.1;Parent=gene-PKHYL_RS12105;Dbxref=Genbank:WP_269778173.1;Name=WP_269778173.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021622.2;locus_tag=PKHYL_RS12105;product=restriction endonuclease;protein_id=WP_269778173.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2268274	2269653	.	-	.	ID=gene-PKHYL_RS12110;Name=PKHYL_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12110;old_locus_tag=PKHYL_29560
NZ_AP019516.1	Protein Homology	CDS	2268274	2269653	.	-	0	ID=cds-WP_071003414.1;Parent=gene-PKHYL_RS12110;Dbxref=Genbank:WP_071003414.1;Name=WP_071003414.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF019348.2;locus_tag=PKHYL_RS12110;product=AAA family ATPase;protein_id=WP_071003414.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2269632	2270393	.	-	.	ID=gene-PKHYL_RS12115;Name=PKHYL_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12115;old_locus_tag=PKHYL_29570
NZ_AP019516.1	GeneMarkS-2+	CDS	2269632	2270393	.	-	0	ID=cds-WP_240365281.1;Parent=gene-PKHYL_RS12115;Dbxref=Genbank:WP_240365281.1;Name=WP_240365281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12115;product=hypothetical protein;protein_id=WP_240365281.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2270377	2270622	.	-	.	ID=gene-PKHYL_RS12120;Name=PKHYL_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12120;old_locus_tag=PKHYL_29580
NZ_AP019516.1	GeneMarkS-2+	CDS	2270377	2270622	.	-	0	ID=cds-WP_240365282.1;Parent=gene-PKHYL_RS12120;Dbxref=Genbank:WP_240365282.1;Name=WP_240365282.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12120;product=hypothetical protein;protein_id=WP_240365282.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2271355	2271750	.	+	.	ID=gene-PKHYL_RS12125;Name=PKHYL_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12125;old_locus_tag=PKHYL_29590
NZ_AP019516.1	GeneMarkS-2+	CDS	2271355	2271750	.	+	0	ID=cds-WP_240365283.1;Parent=gene-PKHYL_RS12125;Dbxref=Genbank:WP_240365283.1;Name=WP_240365283.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12125;product=hypothetical protein;protein_id=WP_240365283.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2271888	2272382	.	+	.	ID=gene-PKHYL_RS12130;Name=PKHYL_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12130;old_locus_tag=PKHYL_29600
NZ_AP019516.1	GeneMarkS-2+	CDS	2271888	2272382	.	+	0	ID=cds-WP_240365284.1;Parent=gene-PKHYL_RS12130;Dbxref=Genbank:WP_240365284.1;Name=WP_240365284.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12130;product=hypothetical protein;protein_id=WP_240365284.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2272360	2272782	.	+	.	ID=gene-PKHYL_RS12135;Name=PKHYL_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12135;old_locus_tag=PKHYL_29610
NZ_AP019516.1	GeneMarkS-2+	CDS	2272360	2272782	.	+	0	ID=cds-WP_240365285.1;Parent=gene-PKHYL_RS12135;Dbxref=Genbank:WP_240365285.1;Name=WP_240365285.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12135;product=hypothetical protein;protein_id=WP_240365285.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2272854	2273129	.	+	.	ID=gene-PKHYL_RS12140;Name=PKHYL_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12140;old_locus_tag=PKHYL_29620
NZ_AP019516.1	GeneMarkS-2+	CDS	2272854	2273129	.	+	0	ID=cds-WP_240365286.1;Parent=gene-PKHYL_RS12140;Dbxref=Genbank:WP_240365286.1;Name=WP_240365286.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12140;product=hypothetical protein;protein_id=WP_240365286.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2273074	2274066	.	+	.	ID=gene-PKHYL_RS12145;Name=PKHYL_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12145;old_locus_tag=PKHYL_29630
NZ_AP019516.1	Protein Homology	CDS	2273074	2274066	.	+	0	ID=cds-WP_240365287.1-6;Parent=gene-PKHYL_RS12145;Dbxref=Genbank:WP_240365287.1;Name=WP_240365287.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=PKHYL_RS12145;product=IS30 family transposase;protein_id=WP_240365287.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2274129	2274446	.	+	.	ID=gene-PKHYL_RS12150;Name=PKHYL_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12150;old_locus_tag=PKHYL_29640
NZ_AP019516.1	GeneMarkS-2+	CDS	2274129	2274446	.	+	0	ID=cds-WP_240365288.1;Parent=gene-PKHYL_RS12150;Dbxref=Genbank:WP_240365288.1;Name=WP_240365288.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12150;product=ankyrin repeat domain-containing protein;protein_id=WP_240365288.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2274538	2276157	.	-	.	ID=gene-PKHYL_RS12155;Name=PKHYL_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12155;old_locus_tag=PKHYL_29650
NZ_AP019516.1	Protein Homology	CDS	2274538	2276157	.	-	0	ID=cds-WP_240365289.1;Parent=gene-PKHYL_RS12155;Dbxref=Genbank:WP_240365289.1;Name=WP_240365289.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033611.0;locus_tag=PKHYL_RS12155;product=SAVED domain-containing protein;protein_id=WP_240365289.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2276161	2276673	.	-	.	ID=gene-PKHYL_RS12160;Name=PKHYL_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12160;old_locus_tag=PKHYL_29660
NZ_AP019516.1	Protein Homology	CDS	2276161	2276673	.	-	0	ID=cds-WP_240365290.1;Parent=gene-PKHYL_RS12160;Dbxref=Genbank:WP_240365290.1;Name=WP_240365290.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025819.2;locus_tag=PKHYL_RS12160;product=Mov34/MPN/PAD-1 family protein;protein_id=WP_240365290.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2276658	2277545	.	-	.	ID=gene-PKHYL_RS12165;Name=PKHYL_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12165;old_locus_tag=PKHYL_29670
NZ_AP019516.1	Protein Homology	CDS	2276658	2277545	.	-	0	ID=cds-WP_240365291.1;Parent=gene-PKHYL_RS12165;Dbxref=Genbank:WP_240365291.1;Name=WP_240365291.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013094.2;locus_tag=PKHYL_RS12165;product=ThiF family adenylyltransferase;protein_id=WP_240365291.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2277662	2278348	.	-	.	ID=gene-PKHYL_RS12170;Name=PKHYL_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12170;old_locus_tag=PKHYL_29680
NZ_AP019516.1	GeneMarkS-2+	CDS	2277662	2278348	.	-	0	ID=cds-WP_240365292.1;Parent=gene-PKHYL_RS12170;Dbxref=Genbank:WP_240365292.1;Name=WP_240365292.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12170;product=hypothetical protein;protein_id=WP_240365292.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2278338	2278718	.	-	.	ID=gene-PKHYL_RS12175;Name=PKHYL_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12175;old_locus_tag=PKHYL_29690
NZ_AP019516.1	GeneMarkS-2+	CDS	2278338	2278718	.	-	0	ID=cds-WP_240365293.1;Parent=gene-PKHYL_RS12175;Dbxref=Genbank:WP_240365293.1;Name=WP_240365293.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12175;product=hypothetical protein;protein_id=WP_240365293.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2278721	2279377	.	-	.	ID=gene-PKHYL_RS12180;Name=PKHYL_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12180;old_locus_tag=PKHYL_29700
NZ_AP019516.1	Protein Homology	CDS	2278721	2279377	.	-	0	ID=cds-WP_240365294.1;Parent=gene-PKHYL_RS12180;Dbxref=Genbank:WP_240365294.1;Name=WP_240365294.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037736.2;locus_tag=PKHYL_RS12180;product=nucleotidyltransferase;protein_id=WP_240365294.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2279673	2281216	.	+	.	ID=gene-PKHYL_RS12185;Name=PKHYL_RS12185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12185;old_locus_tag=PKHYL_29710;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2279673	2281216	.	+	0	ID=cds-PKHYL_RS12185;Parent=gene-PKHYL_RS12185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005028498.1;locus_tag=PKHYL_RS12185;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2281267	2282341	.	+	.	ID=gene-PKHYL_RS12190;Name=PKHYL_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12190;old_locus_tag=PKHYL_29720
NZ_AP019516.1	Protein Homology	CDS	2281267	2281962	.	+	0	ID=cds-WP_240365295.1-2;Parent=gene-PKHYL_RS12190;Dbxref=Genbank:WP_240365295.1;Name=WP_240365295.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611560.1;locus_tag=PKHYL_RS12190;product=IS3 family transposase;protein_id=WP_240365295.1;transl_table=11
NZ_AP019516.1	Protein Homology	CDS	2281964	2282341	.	+	0	ID=cds-WP_240365295.1-2;Parent=gene-PKHYL_RS12190;Dbxref=Genbank:WP_240365295.1;Name=WP_240365295.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611560.1;locus_tag=PKHYL_RS12190;product=IS3 family transposase;protein_id=WP_240365295.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2282861	2283562	.	-	.	ID=gene-PKHYL_RS12195;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=PKHYL_RS12195;old_locus_tag=PKHYL_29740
NZ_AP019516.1	Protein Homology	CDS	2282861	2283562	.	-	0	ID=cds-WP_071003402.1;Parent=gene-PKHYL_RS12195;Dbxref=Genbank:WP_071003402.1;Name=WP_071003402.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513055.1;locus_tag=PKHYL_RS12195;product=molybdate ABC transporter permease subunit;protein_id=WP_071003402.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2283609	2284448	.	-	.	ID=gene-PKHYL_RS12200;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=PKHYL_RS12200;old_locus_tag=PKHYL_29750
NZ_AP019516.1	Protein Homology	CDS	2283609	2284448	.	-	0	ID=cds-WP_071003400.1;Parent=gene-PKHYL_RS12200;Dbxref=Genbank:WP_071003400.1;Name=WP_071003400.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513056.1;locus_tag=PKHYL_RS12200;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_071003400.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2284441	2284929	.	-	.	ID=gene-PKHYL_RS12205;Name=PKHYL_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12205;old_locus_tag=PKHYL_29760
NZ_AP019516.1	Protein Homology	CDS	2284441	2284929	.	-	0	ID=cds-WP_240365296.1;Parent=gene-PKHYL_RS12205;Dbxref=Genbank:WP_240365296.1;Name=WP_240365296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513057.1;locus_tag=PKHYL_RS12205;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_240365296.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2284982	2285263	.	-	.	ID=gene-PKHYL_RS12210;Name=PKHYL_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12210;old_locus_tag=PKHYL_29770
NZ_AP019516.1	Protein Homology	CDS	2284982	2285263	.	-	0	ID=cds-WP_071003397.1;Parent=gene-PKHYL_RS12210;Dbxref=Genbank:WP_071003397.1;Name=WP_071003397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199064.1;locus_tag=PKHYL_RS12210;product=MoaD/ThiS family protein;protein_id=WP_071003397.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2285340	2285845	.	-	.	ID=gene-PKHYL_RS12215;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=pseudogene;locus_tag=PKHYL_RS12215;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2285340	2285845	.	-	0	ID=cds-PKHYL_RS12215;Parent=gene-PKHYL_RS12215;Note=frameshifted;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199061.1;locus_tag=PKHYL_RS12215;product=cyclic pyranopterin monophosphate synthase MoaC;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2285888	2286517	.	-	.	ID=gene-PKHYL_RS12220;Name=PKHYL_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12220;old_locus_tag=PKHYL_29800
NZ_AP019516.1	Protein Homology	CDS	2285888	2286517	.	-	0	ID=cds-WP_240365297.1;Parent=gene-PKHYL_RS12220;Dbxref=Genbank:WP_240365297.1;Name=WP_240365297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005403902.1;locus_tag=PKHYL_RS12220;product=molybdenum cofactor guanylyltransferase;protein_id=WP_240365297.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2286927	2287463	.	-	.	ID=gene-PKHYL_RS12225;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=PKHYL_RS12225;old_locus_tag=PKHYL_29810
NZ_AP019516.1	Protein Homology	CDS	2286927	2287463	.	-	0	ID=cds-WP_240365298.1;Parent=gene-PKHYL_RS12225;Dbxref=Genbank:WP_240365298.1;Name=WP_240365298.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443017.1;locus_tag=PKHYL_RS12225;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_240365298.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2287575	2288674	.	-	.	ID=gene-PKHYL_RS12230;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=pseudogene;locus_tag=PKHYL_RS12230;old_locus_tag=PKHYL_29830;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2287575	2288674	.	-	0	ID=cds-PKHYL_RS12230;Parent=gene-PKHYL_RS12230;Note=frameshifted;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199054.1;locus_tag=PKHYL_RS12230;product=GTP 3'%2C8-cyclase MoaA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2288797	2290092	.	-	.	ID=gene-PKHYL_RS12235;Name=PKHYL_RS12235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12235;old_locus_tag=PKHYL_29840;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2288797	2290092	.	-	0	ID=cds-PKHYL_RS12235;Parent=gene-PKHYL_RS12235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279899.1;locus_tag=PKHYL_RS12235;product=molybdopterin molybdotransferase MoeA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2290448	2291746	.	-	.	ID=gene-PKHYL_RS12240;Name=PKHYL_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12240;old_locus_tag=PKHYL_29850
NZ_AP019516.1	Protein Homology	CDS	2290448	2291746	.	-	0	ID=cds-WP_240365299.1;Parent=gene-PKHYL_RS12240;Dbxref=Genbank:WP_240365299.1;Name=WP_240365299.1;Ontology_term=GO:0009253,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199050.1;locus_tag=PKHYL_RS12240;product=lytic murein transglycosylase;protein_id=WP_240365299.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2291815	2292604	.	-	.	ID=gene-PKHYL_RS12245;Name=PKHYL_RS12245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12245;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2291815	2292604	.	-	0	ID=cds-PKHYL_RS12245;Parent=gene-PKHYL_RS12245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199048.1;locus_tag=PKHYL_RS12245;product=peptidoglycan DD-metalloendopeptidase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2292796	2293632	.	-	.	ID=gene-PKHYL_RS12250;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=PKHYL_RS12250;old_locus_tag=PKHYL_29880
NZ_AP019516.1	Protein Homology	CDS	2292796	2293632	.	-	0	ID=cds-WP_240365300.1;Parent=gene-PKHYL_RS12250;Dbxref=Genbank:WP_240365300.1;Name=WP_240365300.1;Ontology_term=GO:0006950,GO:0008253,GO:0008254;gbkey=CDS;gene=surE;go_function=5'-nucleotidase activity|0008253||IEA,3'-nucleotidase activity|0008254||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: protein motif:HMM:TIGR00087.1;locus_tag=PKHYL_RS12250;product=5'/3'-nucleotidase SurE;protein_id=WP_240365300.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2294419	2294853	.	+	.	ID=gene-PKHYL_RS12255;Name=PKHYL_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12255;old_locus_tag=PKHYL_29890
NZ_AP019516.1	Protein Homology	CDS	2294419	2294853	.	+	0	ID=cds-WP_058025084.1;Parent=gene-PKHYL_RS12255;Dbxref=Genbank:WP_058025084.1;Name=WP_058025084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199041.1;locus_tag=PKHYL_RS12255;product=hypothetical protein;protein_id=WP_058025084.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2295364	2296529	.	+	.	ID=gene-PKHYL_RS12260;Name=PKHYL_RS12260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12260;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2295364	2296529	.	+	0	ID=cds-PKHYL_RS12260;Parent=gene-PKHYL_RS12260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199038.1;locus_tag=PKHYL_RS12260;product=D-alanyl-D-alanine carboxypeptidase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2296892	2297137	.	-	.	ID=gene-PKHYL_RS12265;Name=PKHYL_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12265;old_locus_tag=PKHYL_29920
NZ_AP019516.1	GeneMarkS-2+	CDS	2296892	2297137	.	-	0	ID=cds-WP_240365301.1;Parent=gene-PKHYL_RS12265;Dbxref=Genbank:WP_240365301.1;Name=WP_240365301.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12265;product=hypothetical protein;protein_id=WP_240365301.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2297146	2297397	.	-	.	ID=gene-PKHYL_RS12270;Name=PKHYL_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12270;old_locus_tag=PKHYL_29930
NZ_AP019516.1	Protein Homology	CDS	2297146	2297397	.	-	0	ID=cds-WP_240365302.1;Parent=gene-PKHYL_RS12270;Dbxref=Genbank:WP_240365302.1;Name=WP_240365302.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=PKHYL_RS12270;product=ATP-binding protein;protein_id=WP_240365302.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2297605	2298672	.	-	.	ID=gene-PKHYL_RS12275;Name=PKHYL_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12275;old_locus_tag=PKHYL_29950
NZ_AP019516.1	Protein Homology	CDS	2297605	2298672	.	-	0	ID=cds-WP_240365303.1;Parent=gene-PKHYL_RS12275;Dbxref=Genbank:WP_240365303.1;Name=WP_240365303.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012722.2;locus_tag=PKHYL_RS12275;product=hypothetical protein;protein_id=WP_240365303.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2298854	2300276	.	-	.	ID=gene-PKHYL_RS12280;Name=der;gbkey=Gene;gene=der;gene_biotype=pseudogene;locus_tag=PKHYL_RS12280;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2298854	2300276	.	-	0	ID=cds-PKHYL_RS12280;Parent=gene-PKHYL_RS12280;Note=frameshifted;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279972.1;locus_tag=PKHYL_RS12280;product=ribosome biogenesis GTPase Der;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2300674	2301813	.	-	.	ID=gene-PKHYL_RS12285;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=PKHYL_RS12285;old_locus_tag=PKHYL_29980
NZ_AP019516.1	Protein Homology	CDS	2300674	2301813	.	-	0	ID=cds-WP_240365304.1;Parent=gene-PKHYL_RS12285;Dbxref=Genbank:WP_240365304.1;Name=WP_240365304.1;Ontology_term=GO:0005515,GO:0009279;gbkey=CDS;gene=bamB;go_component=cell outer membrane|0009279||IEA;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:TIGR03300.1;locus_tag=PKHYL_RS12285;product=outer membrane protein assembly factor BamB;protein_id=WP_240365304.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2301972	2302766	.	-	.	ID=gene-PKHYL_RS12290;Name=PKHYL_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12290;old_locus_tag=PKHYL_29990
NZ_AP019516.1	Protein Homology	CDS	2301972	2302766	.	-	0	ID=cds-WP_240365305.1;Parent=gene-PKHYL_RS12290;Dbxref=Genbank:WP_240365305.1;Name=WP_240365305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199032.1;locus_tag=PKHYL_RS12290;product=tetratricopeptide repeat protein;protein_id=WP_240365305.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2302837	2304137	.	-	.	ID=gene-PKHYL_RS12295;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=pseudogene;locus_tag=PKHYL_RS12295;old_locus_tag=PKHYL_30000;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2302837	2304137	.	-	0	ID=cds-PKHYL_RS12295;Parent=gene-PKHYL_RS12295;Note=frameshifted;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199031.1;locus_tag=PKHYL_RS12295;product=histidine--tRNA ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2304260	2305376	.	-	.	ID=gene-PKHYL_RS12300;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=pseudogene;gene_synonym=gcpE;locus_tag=PKHYL_RS12300;old_locus_tag=PKHYL_30020;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2304260	2305376	.	-	0	ID=cds-PKHYL_RS12300;Parent=gene-PKHYL_RS12300;Note=frameshifted;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279968.1;locus_tag=PKHYL_RS12300;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2305494	2306309	.	-	.	ID=gene-PKHYL_RS12305;Name=PKHYL_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12305;old_locus_tag=PKHYL_30030
NZ_AP019516.1	Protein Homology	CDS	2305494	2306309	.	-	0	ID=cds-WP_071003371.1;Parent=gene-PKHYL_RS12305;Dbxref=Genbank:WP_071003371.1;Name=WP_071003371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442925.1;locus_tag=PKHYL_RS12305;product=helix-turn-helix domain-containing protein;protein_id=WP_071003371.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2306306	2307241	.	-	.	ID=gene-PKHYL_RS12310;Name=PKHYL_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12310;old_locus_tag=PKHYL_30040
NZ_AP019516.1	Protein Homology	CDS	2306306	2307241	.	-	0	ID=cds-WP_240365306.1;Parent=gene-PKHYL_RS12310;Dbxref=Genbank:WP_240365306.1;Name=WP_240365306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442924.1;locus_tag=PKHYL_RS12310;product=type IV pilus biogenesis/stability protein PilW;protein_id=WP_240365306.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2307457	2308687	.	-	.	ID=gene-PKHYL_RS12315;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=pseudogene;locus_tag=PKHYL_RS12315;old_locus_tag=PKHYL_30050;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2307457	2308687	.	-	0	ID=cds-PKHYL_RS12315;Parent=gene-PKHYL_RS12315;Note=frameshifted;Ontology_term=GO:0031167,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199027.1;locus_tag=PKHYL_RS12315;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2308988	2309419	.	-	.	ID=gene-PKHYL_RS12320;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=PKHYL_RS12320;old_locus_tag=PKHYL_30060
NZ_AP019516.1	Protein Homology	CDS	2308988	2309419	.	-	0	ID=cds-WP_058025095.1;Parent=gene-PKHYL_RS12320;Dbxref=Genbank:WP_058025095.1;Name=WP_058025095.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963851.1;locus_tag=PKHYL_RS12320;product=nucleoside-diphosphate kinase;protein_id=WP_058025095.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2309766	2310116	.	+	.	ID=gene-PKHYL_RS12325;Name=PKHYL_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12325;old_locus_tag=PKHYL_30070
NZ_AP019516.1	Protein Homology	CDS	2309766	2310116	.	+	0	ID=cds-WP_240365307.1;Parent=gene-PKHYL_RS12325;Dbxref=Genbank:WP_240365307.1;Name=WP_240365307.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023742.2;locus_tag=PKHYL_RS12325;product=helix-turn-helix domain-containing protein;protein_id=WP_240365307.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2310149	2310841	.	+	.	ID=gene-PKHYL_RS12330;Name=PKHYL_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12330;old_locus_tag=PKHYL_30080
NZ_AP019516.1	Protein Homology	CDS	2310149	2310841	.	+	0	ID=cds-WP_240365308.1;Parent=gene-PKHYL_RS12330;Dbxref=Genbank:WP_240365308.1;Name=WP_240365308.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040570.1;locus_tag=PKHYL_RS12330;product=transposase;protein_id=WP_240365308.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2310910	2311518	.	+	.	ID=gene-PKHYL_RS12335;Name=PKHYL_RS12335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12335;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2310910	2311518	.	+	0	ID=cds-PKHYL_RS12335;Parent=gene-PKHYL_RS12335;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002782963.1;locus_tag=PKHYL_RS12335;product=IS607 family transposase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2311515	2311622	.	+	.	ID=gene-PKHYL_RS12340;Name=PKHYL_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12340
NZ_AP019516.1	Protein Homology	CDS	2311515	2311622	.	+	0	ID=cds-WP_240365309.1;Parent=gene-PKHYL_RS12340;Dbxref=Genbank:WP_240365309.1;Name=WP_240365309.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023742.2;locus_tag=PKHYL_RS12340;product=helix-turn-helix domain-containing protein;protein_id=WP_240365309.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2311582	2311824	.	+	.	ID=gene-PKHYL_RS12345;Name=PKHYL_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12345;old_locus_tag=PKHYL_30100
NZ_AP019516.1	GeneMarkS-2+	CDS	2311582	2311824	.	+	0	ID=cds-WP_240365310.1;Parent=gene-PKHYL_RS12345;Dbxref=Genbank:WP_240365310.1;Name=WP_240365310.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12345;product=hypothetical protein;protein_id=WP_240365310.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2311811	2312671	.	+	.	ID=gene-PKHYL_RS12350;Name=PKHYL_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12350;old_locus_tag=PKHYL_30110
NZ_AP019516.1	Protein Homology	CDS	2311811	2312671	.	+	0	ID=cds-WP_240365311.1;Parent=gene-PKHYL_RS12350;Dbxref=Genbank:WP_240365311.1;Name=WP_240365311.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040570.1;locus_tag=PKHYL_RS12350;product=transposase;protein_id=WP_240365311.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2312838	2313035	.	+	.	ID=gene-PKHYL_RS12355;Name=PKHYL_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12355
NZ_AP019516.1	Protein Homology	CDS	2312838	2313035	.	+	0	ID=cds-WP_240366532.1;Parent=gene-PKHYL_RS12355;Dbxref=Genbank:WP_240366532.1;Name=WP_240366532.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018933.2;locus_tag=PKHYL_RS12355;product=transposase;protein_id=WP_240366532.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2313316	2314605	.	-	.	ID=gene-PKHYL_RS12360;Name=PKHYL_RS12360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12360;old_locus_tag=PKHYL_30120;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2313316	2314605	.	-	0	ID=cds-PKHYL_RS12360;Parent=gene-PKHYL_RS12360;Note=frameshifted;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004989707.1;locus_tag=PKHYL_RS12360;product=adenylosuccinate synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2314753	2316051	.	-	.	ID=gene-PKHYL_RS12365;Name=PKHYL_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12365;old_locus_tag=PKHYL_30140
NZ_AP019516.1	Protein Homology	CDS	2314753	2316051	.	-	0	ID=cds-WP_240365312.1;Parent=gene-PKHYL_RS12365;Dbxref=Genbank:WP_240365312.1;Name=WP_240365312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395466.1;locus_tag=PKHYL_RS12365;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_240365312.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2316538	2316927	.	+	.	ID=gene-PKHYL_RS12370;Name=PKHYL_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12370;old_locus_tag=PKHYL_30150
NZ_AP019516.1	Protein Homology	CDS	2316538	2316927	.	+	0	ID=cds-WP_058024362.1;Parent=gene-PKHYL_RS12370;Dbxref=Genbank:WP_058024362.1;Name=WP_058024362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512994.1;locus_tag=PKHYL_RS12370;product=DUF2237 domain-containing protein;protein_id=WP_058024362.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2317023	2318238	.	+	.	ID=gene-PKHYL_RS12375;Name=corA;gbkey=Gene;gene=corA;gene_biotype=pseudogene;locus_tag=PKHYL_RS12375;old_locus_tag=PKHYL_30160;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2317023	2318238	.	+	0	ID=cds-PKHYL_RS12375;Parent=gene-PKHYL_RS12375;Note=frameshifted;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095;gbkey=CDS;gene=corA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442919.1;locus_tag=PKHYL_RS12375;product=magnesium/cobalt transporter CorA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2318303	2318821	.	-	.	ID=gene-PKHYL_RS12380;Name=PKHYL_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12380;old_locus_tag=PKHYL_30180
NZ_AP019516.1	Protein Homology	CDS	2318303	2318821	.	-	0	ID=cds-WP_240365313.1;Parent=gene-PKHYL_RS12380;Dbxref=Genbank:WP_240365313.1;Name=WP_240365313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199010.1;locus_tag=PKHYL_RS12380;product=phosphate-starvation-inducible PsiE family protein;protein_id=WP_240365313.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2318918	2319797	.	-	.	ID=gene-PKHYL_RS12385;Name=folD;gbkey=Gene;gene=folD;gene_biotype=pseudogene;locus_tag=PKHYL_RS12385;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2318918	2319797	.	-	0	ID=cds-PKHYL_RS12385;Parent=gene-PKHYL_RS12385;Note=frameshifted;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010199000.1;locus_tag=PKHYL_RS12385;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2320028	2321453	.	-	.	ID=gene-PKHYL_RS12390;Name=PKHYL_RS12390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12390;old_locus_tag=PKHYL_30210;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2320028	2321453	.	-	0	ID=cds-PKHYL_RS12390;Parent=gene-PKHYL_RS12390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959521.1;locus_tag=PKHYL_RS12390;product=capsule assembly Wzi family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2321565	2321750	.	-	.	ID=gene-PKHYL_RS12395;Name=PKHYL_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12395;old_locus_tag=PKHYL_30240
NZ_AP019516.1	GeneMarkS-2+	CDS	2321565	2321750	.	-	0	ID=cds-WP_240365314.1;Parent=gene-PKHYL_RS12395;Dbxref=Genbank:WP_240365314.1;Name=WP_240365314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12395;product=hypothetical protein;protein_id=WP_240365314.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2321728	2322585	.	-	.	ID=gene-PKHYL_RS12400;Name=PKHYL_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12400;old_locus_tag=PKHYL_30250
NZ_AP019516.1	Protein Homology	CDS	2321728	2322585	.	-	0	ID=cds-WP_240365315.1;Parent=gene-PKHYL_RS12400;Dbxref=Genbank:WP_240365315.1;Name=WP_240365315.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013227.2;locus_tag=PKHYL_RS12400;product=DegT/DnrJ/EryC1/StrS aminotransferase family protein;protein_id=WP_240365315.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2322880	2323533	.	-	.	ID=gene-PKHYL_RS12405;Name=PKHYL_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12405;old_locus_tag=PKHYL_30260
NZ_AP019516.1	Protein Homology	CDS	2322880	2323533	.	-	0	ID=cds-WP_240365316.1;Parent=gene-PKHYL_RS12405;Dbxref=Genbank:WP_240365316.1;Name=WP_240365316.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF013530.2;locus_tag=PKHYL_RS12405;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_240365316.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2323983	2324543	.	-	.	ID=gene-PKHYL_RS12410;Name=PKHYL_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12410;old_locus_tag=PKHYL_30290
NZ_AP019516.1	Protein Homology	CDS	2323983	2324543	.	-	0	ID=cds-WP_240365317.1;Parent=gene-PKHYL_RS12410;Dbxref=Genbank:WP_240365317.1;Name=WP_240365317.1;Ontology_term=GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF014686.2;locus_tag=PKHYL_RS12410;product=ATP-grasp domain-containing protein;protein_id=WP_240365317.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2324918	2325256	.	-	.	ID=gene-PKHYL_RS12415;Name=PKHYL_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12415;old_locus_tag=PKHYL_30300
NZ_AP019516.1	Protein Homology	CDS	2324918	2325256	.	-	0	ID=cds-WP_240365318.1;Parent=gene-PKHYL_RS12415;Dbxref=Genbank:WP_240365318.1;Name=WP_240365318.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012376.2;locus_tag=PKHYL_RS12415;product=metallophosphoesterase;protein_id=WP_240365318.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2325383	2325903	.	-	.	ID=gene-PKHYL_RS12420;Name=PKHYL_RS12420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12420;partial=true;pseudo=true;start_range=.,2325383
NZ_AP019516.1	Protein Homology	CDS	2325383	2325903	.	-	0	ID=cds-PKHYL_RS12420;Parent=gene-PKHYL_RS12420;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000919785.1;locus_tag=PKHYL_RS12420;partial=true;product=sugar transferase;pseudo=true;start_range=.,2325383;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2325900	2327037	.	-	.	ID=gene-PKHYL_RS12425;Name=PKHYL_RS12425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12425;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2325900	2327037	.	-	0	ID=cds-PKHYL_RS12425;Parent=gene-PKHYL_RS12425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930788.1;locus_tag=PKHYL_RS12425;product=glycosyltransferase family 4 protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2327230	2327409	.	-	.	ID=gene-PKHYL_RS12430;Name=PKHYL_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12430;old_locus_tag=PKHYL_30360
NZ_AP019516.1	GeneMarkS-2+	CDS	2327230	2327409	.	-	0	ID=cds-WP_240365319.1;Parent=gene-PKHYL_RS12430;Dbxref=Genbank:WP_240365319.1;Name=WP_240365319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12430;product=hypothetical protein;protein_id=WP_240365319.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2328364	2328594	.	-	.	ID=gene-PKHYL_RS17720;Name=PKHYL_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17720;old_locus_tag=PKHYL_30370
NZ_AP019516.1	Protein Homology	CDS	2328364	2328594	.	-	0	ID=cds-WP_269778174.1;Parent=gene-PKHYL_RS17720;Dbxref=Genbank:WP_269778174.1;Name=WP_269778174.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=PKHYL_RS17720;product=glycosyltransferase;protein_id=WP_269778174.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2329058	2329387	.	-	.	ID=gene-PKHYL_RS12440;Name=PKHYL_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12440;old_locus_tag=PKHYL_30390
NZ_AP019516.1	GeneMarkS-2+	CDS	2329058	2329387	.	-	0	ID=cds-WP_240365320.1;Parent=gene-PKHYL_RS12440;Dbxref=Genbank:WP_240365320.1;Name=WP_240365320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12440;product=hypothetical protein;protein_id=WP_240365320.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2329431	2330439	.	-	.	ID=gene-PKHYL_RS17725;Name=PKHYL_RS17725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17725;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2329431	2330439	.	-	0	ID=cds-PKHYL_RS17725;Parent=gene-PKHYL_RS17725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004652471.1;locus_tag=PKHYL_RS17725;product=NAD-dependent epimerase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2330436	2331604	.	-	.	ID=gene-PKHYL_RS12455;Name=PKHYL_RS12455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12455;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2330436	2331604	.	-	0	ID=cds-PKHYL_RS12455;Parent=gene-PKHYL_RS12455;Note=frameshifted%3B internal stop;Ontology_term=GO:0000271,GO:0003979,GO:0016616,GO:0051287;gbkey=CDS;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016540685.1;locus_tag=PKHYL_RS12455;product=nucleotide sugar dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2331899	2332656	.	-	.	ID=gene-PKHYL_RS12460;Name=PKHYL_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12460
NZ_AP019516.1	Protein Homology	CDS	2331990	2332656	.	-	0	ID=cds-WP_240365322.1;Parent=gene-PKHYL_RS12460;Dbxref=Genbank:WP_240365322.1;Name=WP_240365322.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672538.1;locus_tag=PKHYL_RS12460;product=IS5 family transposase;protein_id=WP_240365322.1;transl_table=11
NZ_AP019516.1	Protein Homology	CDS	2331899	2331990	.	-	2	ID=cds-WP_240365322.1;Parent=gene-PKHYL_RS12460;Dbxref=Genbank:WP_240365322.1;Name=WP_240365322.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672538.1;locus_tag=PKHYL_RS12460;product=IS5 family transposase;protein_id=WP_240365322.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2333414	2333983	.	-	.	ID=gene-PKHYL_RS12465;Name=PKHYL_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12465;old_locus_tag=PKHYL_30470
NZ_AP019516.1	Protein Homology	CDS	2333414	2333983	.	-	0	ID=cds-WP_240366533.1;Parent=gene-PKHYL_RS12465;Dbxref=Genbank:WP_240366533.1;Name=WP_240366533.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025072.2;locus_tag=PKHYL_RS12465;product=glycosyltransferase;protein_id=WP_240366533.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2334486	2334893	.	-	.	ID=gene-PKHYL_RS12470;Name=PKHYL_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12470;old_locus_tag=PKHYL_30490
NZ_AP019516.1	Protein Homology	CDS	2334486	2334893	.	-	0	ID=cds-WP_240365323.1;Parent=gene-PKHYL_RS12470;Dbxref=Genbank:WP_240365323.1;Name=WP_240365323.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016145.2;locus_tag=PKHYL_RS12470;product=polysaccharide pyruvyl transferase family protein;protein_id=WP_240365323.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2335160	2335681	.	-	.	ID=gene-PKHYL_RS12475;Name=PKHYL_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12475;old_locus_tag=PKHYL_30500
NZ_AP019516.1	Protein Homology	CDS	2335160	2335681	.	-	0	ID=cds-WP_240365324.1;Parent=gene-PKHYL_RS12475;Dbxref=Genbank:WP_240365324.1;Name=WP_240365324.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016145.2;locus_tag=PKHYL_RS12475;product=polysaccharide pyruvyl transferase family protein;protein_id=WP_240365324.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2335980	2336273	.	-	.	ID=gene-PKHYL_RS12480;Name=PKHYL_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12480;old_locus_tag=PKHYL_30520
NZ_AP019516.1	GeneMarkS-2+	CDS	2335980	2336273	.	-	0	ID=cds-WP_240365325.1;Parent=gene-PKHYL_RS12480;Dbxref=Genbank:WP_240365325.1;Name=WP_240365325.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12480;product=hypothetical protein;protein_id=WP_240365325.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2337031	2338065	.	-	.	ID=gene-PKHYL_RS12485;Name=PKHYL_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12485;old_locus_tag=PKHYL_30530
NZ_AP019516.1	Protein Homology	CDS	2337031	2338065	.	-	0	ID=cds-WP_240365326.1;Parent=gene-PKHYL_RS12485;Dbxref=Genbank:WP_240365326.1;Name=WP_240365326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442900.1;locus_tag=PKHYL_RS12485;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_240365326.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2338105	2339382	.	-	.	ID=gene-PKHYL_RS12490;Name=tviB;gbkey=Gene;gene=tviB;gene_biotype=protein_coding;locus_tag=PKHYL_RS12490;old_locus_tag=PKHYL_30540
NZ_AP019516.1	Protein Homology	CDS	2338105	2339382	.	-	0	ID=cds-WP_240365327.1;Parent=gene-PKHYL_RS12490;Dbxref=Genbank:WP_240365327.1;Name=WP_240365327.1;Ontology_term=GO:0000271,GO:0016491,GO:0051287;gbkey=CDS;gene=tviB;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005255812.1;locus_tag=PKHYL_RS12490;product=Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB;protein_id=WP_240365327.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2339423	2340940	.	-	.	ID=gene-PKHYL_RS12495;Name=PKHYL_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12495;old_locus_tag=PKHYL_30550
NZ_AP019516.1	Protein Homology	CDS	2339423	2340940	.	-	0	ID=cds-WP_240365328.1;Parent=gene-PKHYL_RS12495;Dbxref=Genbank:WP_240365328.1;Name=WP_240365328.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014740.2;locus_tag=PKHYL_RS12495;product=nucleoside-diphosphate sugar epimerase/dehydratase;protein_id=WP_240365328.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2340948	2341400	.	-	.	ID=gene-PKHYL_RS12500;Name=PKHYL_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12500;old_locus_tag=PKHYL_30560
NZ_AP019516.1	GeneMarkS-2+	CDS	2340948	2341400	.	-	0	ID=cds-WP_240365329.1;Parent=gene-PKHYL_RS12500;Dbxref=Genbank:WP_240365329.1;Name=WP_240365329.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12500;product=hypothetical protein;protein_id=WP_240365329.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2341457	2342698	.	-	.	ID=gene-PKHYL_RS12505;Name=PKHYL_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12505;old_locus_tag=PKHYL_30570
NZ_AP019516.1	Protein Homology	CDS	2341457	2342698	.	-	0	ID=cds-WP_240365330.1;Parent=gene-PKHYL_RS12505;Dbxref=Genbank:WP_240365330.1;Name=WP_240365330.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013793.2;locus_tag=PKHYL_RS12505;product=AAA family ATPase;protein_id=WP_240365330.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2342695	2343735	.	-	.	ID=gene-PKHYL_RS12510;Name=PKHYL_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12510;old_locus_tag=PKHYL_30580
NZ_AP019516.1	Protein Homology	CDS	2342695	2343735	.	-	0	ID=cds-WP_240365331.1;Parent=gene-PKHYL_RS12510;Dbxref=Genbank:WP_240365331.1;Name=WP_240365331.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: protein motif:HMM:NF014732.2;locus_tag=PKHYL_RS12510;product=Wzz/FepE/Etk N-terminal domain-containing protein;protein_id=WP_240365331.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2343781	2344211	.	-	.	ID=gene-PKHYL_RS12515;Name=PKHYL_RS12515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12515;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2343781	2344211	.	-	0	ID=cds-PKHYL_RS12515;Parent=gene-PKHYL_RS12515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512961.1;locus_tag=PKHYL_RS12515;product=low molecular weight phosphotyrosine protein phosphatase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2344224	2345309	.	-	.	ID=gene-PKHYL_RS12520;Name=PKHYL_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12520;old_locus_tag=PKHYL_30600
NZ_AP019516.1	Protein Homology	CDS	2344224	2345309	.	-	0	ID=cds-WP_058024345.1;Parent=gene-PKHYL_RS12520;Dbxref=Genbank:WP_058024345.1;Name=WP_058024345.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959542.1;locus_tag=PKHYL_RS12520;product=polysaccharide biosynthesis/export family protein;protein_id=WP_058024345.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2345896	2346785	.	+	.	ID=gene-PKHYL_RS12525;Name=PKHYL_RS12525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12525;old_locus_tag=PKHYL_30610;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2345896	2346785	.	+	0	ID=cds-PKHYL_RS12525;Parent=gene-PKHYL_RS12525;Note=frameshifted;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442894.1;locus_tag=PKHYL_RS12525;product=pseudouridine synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2346924	2347475	.	-	.	ID=gene-PKHYL_RS12530;Name=PKHYL_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12530;old_locus_tag=PKHYL_30630
NZ_AP019516.1	Protein Homology	CDS	2346924	2347475	.	-	0	ID=cds-WP_186474894.1;Parent=gene-PKHYL_RS12530;Dbxref=Genbank:WP_186474894.1;Name=WP_186474894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198996.1;locus_tag=PKHYL_RS12530;product=hypothetical protein;protein_id=WP_186474894.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2347543	2348211	.	-	.	ID=gene-PKHYL_RS12535;Name=PKHYL_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12535;old_locus_tag=PKHYL_30640
NZ_AP019516.1	Protein Homology	CDS	2347543	2348211	.	-	0	ID=cds-WP_240365332.1;Parent=gene-PKHYL_RS12535;Dbxref=Genbank:WP_240365332.1;Name=WP_240365332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442892.1;locus_tag=PKHYL_RS12535;product=hypothetical protein;protein_id=WP_240365332.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2348420	2349169	.	-	.	ID=gene-PKHYL_RS12540;Name=PKHYL_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12540;old_locus_tag=PKHYL_30650
NZ_AP019516.1	Protein Homology	CDS	2348420	2349169	.	-	0	ID=cds-WP_186475400.1;Parent=gene-PKHYL_RS12540;Dbxref=Genbank:WP_186475400.1;Name=WP_186475400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198992.1;locus_tag=PKHYL_RS12540;product=hypothetical protein;protein_id=WP_186475400.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2349350	2349951	.	+	.	ID=gene-PKHYL_RS12545;Name=PKHYL_RS12545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12545;old_locus_tag=PKHYL_30660;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2349350	2349951	.	+	0	ID=cds-PKHYL_RS12545;Parent=gene-PKHYL_RS12545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512955.1;locus_tag=PKHYL_RS12545;product=LysE/ArgO family amino acid transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2350071	2350677	.	-	.	ID=gene-PKHYL_RS12550;Name=PKHYL_RS12550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12550;old_locus_tag=PKHYL_30670;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2350071	2350677	.	-	0	ID=cds-PKHYL_RS12550;Parent=gene-PKHYL_RS12550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442890.1;locus_tag=PKHYL_RS12550;product=MarC family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2350931	2351791	.	-	.	ID=gene-PKHYL_RS12555;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=PKHYL_RS12555;old_locus_tag=PKHYL_30690
NZ_AP019516.1	Protein Homology	CDS	2350931	2351791	.	-	0	ID=cds-WP_186474897.1;Parent=gene-PKHYL_RS12555;Dbxref=Genbank:WP_186474897.1;Name=WP_186474897.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279922.1;locus_tag=PKHYL_RS12555;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_186474897.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2351962	2352991	.	-	.	ID=gene-PKHYL_RS12560;Name=PKHYL_RS12560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12560;old_locus_tag=PKHYL_30700;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2351962	2352991	.	-	0	ID=cds-PKHYL_RS12560;Parent=gene-PKHYL_RS12560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512952.1;locus_tag=PKHYL_RS12560;product=hypothetical protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2353343	2354481	.	+	.	ID=gene-PKHYL_RS12565;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=pseudogene;locus_tag=PKHYL_RS12565;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2353343	2354481	.	+	0	ID=cds-PKHYL_RS12565;Parent=gene-PKHYL_RS12565;Note=frameshifted;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512951.1;locus_tag=PKHYL_RS12565;product=quinolinate synthase NadA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2354565	2354948	.	+	.	ID=gene-PKHYL_RS17730;Name=PKHYL_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17730;old_locus_tag=PKHYL_30740
NZ_AP019516.1	Protein Homology	CDS	2354565	2354948	.	+	0	ID=cds-WP_269778175.1;Parent=gene-PKHYL_RS17730;Dbxref=Genbank:WP_269778175.1;Name=WP_269778175.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF013434.2;locus_tag=PKHYL_RS17730;product=FAD-dependent oxidoreductase;protein_id=WP_269778175.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2354849	2356444	.	+	.	ID=gene-PKHYL_RS17735;Name=PKHYL_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17735;old_locus_tag=PKHYL_30750
NZ_AP019516.1	Protein Homology	CDS	2354849	2356444	.	+	0	ID=cds-WP_269778176.1;Parent=gene-PKHYL_RS17735;Dbxref=Genbank:WP_269778176.1;Name=WP_269778176.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013086.2;locus_tag=PKHYL_RS17735;product=FAD-binding protein;protein_id=WP_269778176.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2356641	2356991	.	+	.	ID=gene-PKHYL_RS12580;Name=PKHYL_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12580;old_locus_tag=PKHYL_30760
NZ_AP019516.1	GeneMarkS-2+	CDS	2356641	2356991	.	+	0	ID=cds-WP_240365333.1;Parent=gene-PKHYL_RS12580;Dbxref=Genbank:WP_240365333.1;Name=WP_240365333.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12580;product=hypothetical protein;protein_id=WP_240365333.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2357030	2357550	.	+	.	ID=gene-PKHYL_RS12585;Name=PKHYL_RS12585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12585;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2357030	2357550	.	+	0	ID=cds-PKHYL_RS12585;Parent=gene-PKHYL_RS12585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015889.2;locus_tag=PKHYL_RS12585;product=lysine exporter LysO family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2357594	2358208	.	-	.	ID=gene-PKHYL_RS12590;Name=PKHYL_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12590;old_locus_tag=PKHYL_30790
NZ_AP019516.1	Protein Homology	CDS	2357594	2358208	.	-	0	ID=cds-WP_240365334.1;Parent=gene-PKHYL_RS12590;Dbxref=Genbank:WP_240365334.1;Name=WP_240365334.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012894.2;locus_tag=PKHYL_RS12590;product=OmpA family protein;protein_id=WP_240365334.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2358470	2358811	.	-	.	ID=gene-PKHYL_RS12595;Name=PKHYL_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12595;old_locus_tag=PKHYL_30800
NZ_AP019516.1	GeneMarkS-2+	CDS	2358470	2358811	.	-	0	ID=cds-WP_240365335.1;Parent=gene-PKHYL_RS12595;Dbxref=Genbank:WP_240365335.1;Name=WP_240365335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12595;product=hypothetical protein;protein_id=WP_240365335.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2358893	2360152	.	-	.	ID=gene-PKHYL_RS12600;Name=PKHYL_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12600;old_locus_tag=PKHYL_30810
NZ_AP019516.1	Protein Homology	CDS	2358893	2360152	.	-	0	ID=cds-WP_186474903.1;Parent=gene-PKHYL_RS12600;Dbxref=Genbank:WP_186474903.1;Name=WP_186474903.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512944.1;locus_tag=PKHYL_RS12600;product=FAD-dependent oxidoreductase;protein_id=WP_186474903.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2360318	2361625	.	-	.	ID=gene-PKHYL_RS12605;Name=PKHYL_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12605;old_locus_tag=PKHYL_30820
NZ_AP019516.1	Protein Homology	CDS	2360318	2361625	.	-	0	ID=cds-WP_186474904.1;Parent=gene-PKHYL_RS12605;Dbxref=Genbank:WP_186474904.1;Name=WP_186474904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198936.1;locus_tag=PKHYL_RS12605;product=UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;protein_id=WP_186474904.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2362225	2363310	.	+	.	ID=gene-PKHYL_RS12610;Name=PKHYL_RS12610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12610;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2362225	2363310	.	+	0	ID=cds-PKHYL_RS12610;Parent=gene-PKHYL_RS12610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279915.1;locus_tag=PKHYL_RS12610;product=PhoH family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2363596	2364202	.	+	.	ID=gene-PKHYL_RS12615;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=pseudogene;locus_tag=PKHYL_RS12615;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2363596	2364202	.	+	0	ID=cds-PKHYL_RS12615;Parent=gene-PKHYL_RS12615;Note=frameshifted;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198932.1;locus_tag=PKHYL_RS12615;product=rRNA maturation RNase YbeY;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2364214	2364879	.	-	.	ID=gene-PKHYL_RS12620;Name=PKHYL_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12620;old_locus_tag=PKHYL_30880
NZ_AP019516.1	Protein Homology	CDS	2364214	2364879	.	-	0	ID=cds-WP_240365336.1;Parent=gene-PKHYL_RS12620;Dbxref=Genbank:WP_240365336.1;Name=WP_240365336.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013117.2;locus_tag=PKHYL_RS12620;product=mechanosensitive ion channel family protein;protein_id=WP_240365336.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2364851	2365090	.	-	.	ID=gene-PKHYL_RS12625;Name=PKHYL_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12625;old_locus_tag=PKHYL_30890
NZ_AP019516.1	Protein Homology	CDS	2364851	2365090	.	-	0	ID=cds-WP_240365337.1;Parent=gene-PKHYL_RS12625;Dbxref=Genbank:WP_240365337.1;Name=WP_240365337.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017373.2;locus_tag=PKHYL_RS12625;product=hypothetical protein;protein_id=WP_240365337.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2365267	2366154	.	-	.	ID=gene-PKHYL_RS12630;Name=PKHYL_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12630;old_locus_tag=PKHYL_30900
NZ_AP019516.1	Protein Homology	CDS	2365267	2366154	.	-	0	ID=cds-WP_227517151.1;Parent=gene-PKHYL_RS12630;Dbxref=Genbank:WP_227517151.1;Name=WP_227517151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198926.1;locus_tag=PKHYL_RS12630;product=energy transducer TonB;protein_id=WP_227517151.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2366487	2367266	.	+	.	ID=gene-PKHYL_RS12635;Name=PKHYL_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12635;old_locus_tag=PKHYL_30910
NZ_AP019516.1	Protein Homology	CDS	2366487	2367266	.	+	0	ID=cds-WP_227517150.1;Parent=gene-PKHYL_RS12635;Dbxref=Genbank:WP_227517150.1;Name=WP_227517150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198924.1;locus_tag=PKHYL_RS12635;product=hypothetical protein;protein_id=WP_227517150.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2367366	2368193	.	-	.	ID=gene-PKHYL_RS12640;Name=PKHYL_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12640;old_locus_tag=PKHYL_30920
NZ_AP019516.1	Protein Homology	CDS	2367366	2368193	.	-	0	ID=cds-WP_058024558.1;Parent=gene-PKHYL_RS12640;Dbxref=Genbank:WP_058024558.1;Name=WP_058024558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279886.1;locus_tag=PKHYL_RS12640;product=ferredoxin--NADP reductase;protein_id=WP_058024558.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2368369	2369848	.	-	.	ID=gene-PKHYL_RS12645;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=pseudogene;locus_tag=PKHYL_RS12645;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2368369	2369848	.	-	0	ID=cds-PKHYL_RS12645;Parent=gene-PKHYL_RS12645;Note=frameshifted;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512936.1;locus_tag=PKHYL_RS12645;product=NADH-quinone oxidoreductase subunit NuoN;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2369852	2371475	.	-	.	ID=gene-PKHYL_RS12650;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=pseudogene;locus_tag=PKHYL_RS12650;old_locus_tag=PKHYL_30950;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2369852	2371475	.	-	0	ID=cds-PKHYL_RS12650;Parent=gene-PKHYL_RS12650;Note=frameshifted;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279884.1;locus_tag=PKHYL_RS12650;product=NADH-quinone oxidoreductase subunit M;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2371481	2373355	.	-	.	ID=gene-PKHYL_RS12655;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=PKHYL_RS12655;old_locus_tag=PKHYL_30960
NZ_AP019516.1	Protein Homology	CDS	2371481	2373355	.	-	0	ID=cds-WP_240365338.1;Parent=gene-PKHYL_RS12655;Dbxref=Genbank:WP_240365338.1;Name=WP_240365338.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003668641.1;locus_tag=PKHYL_RS12655;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_240365338.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2373360	2373668	.	-	.	ID=gene-PKHYL_RS12660;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=PKHYL_RS12660;old_locus_tag=PKHYL_30970
NZ_AP019516.1	Protein Homology	CDS	2373360	2373668	.	-	0	ID=cds-WP_025653102.1;Parent=gene-PKHYL_RS12660;Dbxref=Genbank:WP_025653102.1;Name=WP_025653102.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922503.1;locus_tag=PKHYL_RS12660;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_025653102.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2373767	2374498	.	-	.	ID=gene-PKHYL_RS12665;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=PKHYL_RS12665;old_locus_tag=PKHYL_30980
NZ_AP019516.1	Protein Homology	CDS	2373767	2374498	.	-	0	ID=cds-WP_240365339.1;Parent=gene-PKHYL_RS12665;Dbxref=Genbank:WP_240365339.1;Name=WP_240365339.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512932.1;locus_tag=PKHYL_RS12665;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_240365339.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2374495	2375042	.	-	.	ID=gene-PKHYL_RS12670;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=pseudogene;locus_tag=PKHYL_RS12670;old_locus_tag=PKHYL_30990;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2374495	2375042	.	-	0	ID=cds-PKHYL_RS12670;Parent=gene-PKHYL_RS12670;Note=frameshifted;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013107845.1;locus_tag=PKHYL_RS12670;product=NADH-quinone oxidoreductase subunit NuoI;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2375098	2376091	.	-	.	ID=gene-PKHYL_RS12675;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=pseudogene;locus_tag=PKHYL_RS12675;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2375098	2376091	.	-	0	ID=cds-PKHYL_RS12675;Parent=gene-PKHYL_RS12675;Note=frameshifted;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656531.1;locus_tag=PKHYL_RS12675;product=NADH-quinone oxidoreductase subunit NuoH;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2376145	2378073	.	-	.	ID=gene-PKHYL_RS12680;Name=PKHYL_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12680;old_locus_tag=PKHYL_31020
NZ_AP019516.1	Protein Homology	CDS	2376145	2378073	.	-	0	ID=cds-WP_240365340.1;Parent=gene-PKHYL_RS12680;Dbxref=Genbank:WP_240365340.1;Name=WP_240365340.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012602.2;locus_tag=PKHYL_RS12680;product=molybdopterin-dependent oxidoreductase;protein_id=WP_240365340.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2377961	2379211	.	-	.	ID=gene-PKHYL_RS12685;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=PKHYL_RS12685;old_locus_tag=PKHYL_31030
NZ_AP019516.1	Protein Homology	CDS	2377961	2379211	.	-	0	ID=cds-WP_240365341.1;Parent=gene-PKHYL_RS12685;Dbxref=Genbank:WP_240365341.1;Name=WP_240365341.1;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: protein motif:HMM:TIGR01973.1;locus_tag=PKHYL_RS12685;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_240365341.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2379222	2380646	.	-	.	ID=gene-PKHYL_RS12690;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=PKHYL_RS12690;old_locus_tag=PKHYL_31040
NZ_AP019516.1	Protein Homology	CDS	2379222	2380646	.	-	0	ID=cds-WP_071003281.1;Parent=gene-PKHYL_RS12690;Dbxref=Genbank:WP_071003281.1;Name=WP_071003281.1;Ontology_term=GO:0050136;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512928.1;locus_tag=PKHYL_RS12690;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_071003281.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2380643	2381152	.	-	.	ID=gene-PKHYL_RS12695;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=PKHYL_RS12695;old_locus_tag=PKHYL_31050
NZ_AP019516.1	Protein Homology	CDS	2380643	2381152	.	-	0	ID=cds-WP_058024550.1;Parent=gene-PKHYL_RS12695;Dbxref=Genbank:WP_058024550.1;Name=WP_058024550.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512927.1;locus_tag=PKHYL_RS12695;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_058024550.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2381320	2383096	.	-	.	ID=gene-PKHYL_RS12700;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=pseudogene;locus_tag=PKHYL_RS12700;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2381320	2383096	.	-	0	ID=cds-PKHYL_RS12700;Parent=gene-PKHYL_RS12700;Note=frameshifted;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198896.1;locus_tag=PKHYL_RS12700;product=NADH-quinone oxidoreductase subunit C/D;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2383240	2383908	.	-	.	ID=gene-PKHYL_RS12705;Name=PKHYL_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12705;old_locus_tag=PKHYL_31090
NZ_AP019516.1	Protein Homology	CDS	2383240	2383908	.	-	0	ID=cds-WP_058024548.1;Parent=gene-PKHYL_RS12705;Dbxref=Genbank:WP_058024548.1;Name=WP_058024548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673327.1;locus_tag=PKHYL_RS12705;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_058024548.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2384046	2384669	.	-	.	ID=gene-PKHYL_RS12710;Name=ndhC;gbkey=Gene;gene=ndhC;gene_biotype=protein_coding;locus_tag=PKHYL_RS12710;old_locus_tag=PKHYL_31100
NZ_AP019516.1	Protein Homology	CDS	2384046	2384669	.	-	0	ID=cds-WP_093070712.1;Parent=gene-PKHYL_RS12710;Dbxref=Genbank:WP_093070712.1;Name=WP_093070712.1;Ontology_term=GO:0008137;gbkey=CDS;gene=ndhC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512924.1;locus_tag=PKHYL_RS12710;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_093070712.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2385432	2387465	.	+	.	ID=gene-PKHYL_RS12715;Name=PKHYL_RS12715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12715;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2385432	2387465	.	+	0	ID=cds-PKHYL_RS12715;Parent=gene-PKHYL_RS12715;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279872.1;locus_tag=PKHYL_RS12715;product=UvrD-helicase domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2387585	2388976	.	+	.	ID=gene-PKHYL_RS12720;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=PKHYL_RS12720;old_locus_tag=PKHYL_31130
NZ_AP019516.1	Protein Homology	CDS	2387585	2388976	.	+	0	ID=cds-WP_167669402.1;Parent=gene-PKHYL_RS12720;Dbxref=Genbank:WP_167669402.1;Name=WP_167669402.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198886.1;locus_tag=PKHYL_RS12720;product=magnesium transporter;protein_id=WP_167669402.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2389103	2389567	.	+	.	ID=gene-PKHYL_RS12725;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=PKHYL_RS12725;old_locus_tag=PKHYL_31140
NZ_AP019516.1	Protein Homology	CDS	2389103	2389567	.	+	0	ID=cds-WP_071003269.1;Parent=gene-PKHYL_RS12725;Dbxref=Genbank:WP_071003269.1;Name=WP_071003269.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512921.1;locus_tag=PKHYL_RS12725;product=dUTP diphosphatase;protein_id=WP_071003269.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2389745	2391601	.	+	.	ID=gene-PKHYL_RS12730;Name=PKHYL_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12730;old_locus_tag=PKHYL_31150
NZ_AP019516.1	Protein Homology	CDS	2389745	2391601	.	+	0	ID=cds-WP_071003267.1;Parent=gene-PKHYL_RS12730;Dbxref=Genbank:WP_071003267.1;Name=WP_071003267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442862.1;locus_tag=PKHYL_RS12730;product=phosphomannomutase;protein_id=WP_071003267.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2391676	2392576	.	+	.	ID=gene-PKHYL_RS12735;Name=argB;gbkey=Gene;gene=argB;gene_biotype=pseudogene;locus_tag=PKHYL_RS12735;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2391676	2392576	.	+	0	ID=cds-PKHYL_RS12735;Parent=gene-PKHYL_RS12735;Note=frameshifted;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395483.1;locus_tag=PKHYL_RS12735;product=acetylglutamate kinase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2392601	2392774	.	+	.	ID=gene-PKHYL_RS12740;Name=PKHYL_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12740;old_locus_tag=PKHYL_31190
NZ_AP019516.1	GeneMarkS-2+	CDS	2392601	2392774	.	+	0	ID=cds-WP_197496697.1;Parent=gene-PKHYL_RS12740;Dbxref=Genbank:WP_197496697.1;Name=WP_197496697.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12740;product=hypothetical protein;protein_id=WP_197496697.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2392860	2393231	.	-	.	ID=gene-PKHYL_RS12745;Name=PKHYL_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12745;old_locus_tag=PKHYL_31200
NZ_AP019516.1	Protein Homology	CDS	2392860	2393231	.	-	0	ID=cds-WP_240365342.1;Parent=gene-PKHYL_RS12745;Dbxref=Genbank:WP_240365342.1;Name=WP_240365342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442859.1;locus_tag=PKHYL_RS12745;product=arsenate reductase;protein_id=WP_240365342.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2393468	2396155	.	+	.	ID=gene-PKHYL_RS12750;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=pseudogene;locus_tag=PKHYL_RS12750;old_locus_tag=PKHYL_31230;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2393468	2396155	.	+	0	ID=cds-PKHYL_RS12750;Parent=gene-PKHYL_RS12750;Note=frameshifted;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198874.1;locus_tag=PKHYL_RS12750;product=leucine--tRNA ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2396206	2396919	.	+	.	ID=gene-PKHYL_RS12755;Name=PKHYL_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12755;old_locus_tag=PKHYL_31240
NZ_AP019516.1	Protein Homology	CDS	2396206	2396919	.	+	0	ID=cds-WP_240365343.1;Parent=gene-PKHYL_RS12755;Dbxref=Genbank:WP_240365343.1;Name=WP_240365343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512916.1;locus_tag=PKHYL_RS12755;product=hypothetical protein;protein_id=WP_240365343.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2397081	2398165	.	+	.	ID=gene-PKHYL_RS12760;Name=PKHYL_RS12760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12760;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2397081	2398165	.	+	0	ID=cds-PKHYL_RS12760;Parent=gene-PKHYL_RS12760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279864.1;locus_tag=PKHYL_RS12760;product=DNA polymerase III subunit delta;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2398424	2399743	.	+	.	ID=gene-PKHYL_RS12765;Name=PKHYL_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12765;old_locus_tag=PKHYL_31260
NZ_AP019516.1	Protein Homology	CDS	2398424	2399743	.	+	0	ID=cds-WP_093070736.1;Parent=gene-PKHYL_RS12765;Dbxref=Genbank:WP_093070736.1;Name=WP_093070736.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198858.1;locus_tag=PKHYL_RS12765;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_093070736.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2399994	2401943	.	+	.	ID=gene-PKHYL_RS12770;Name=PKHYL_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12770;old_locus_tag=PKHYL_31270
NZ_AP019516.1	Protein Homology	CDS	2399994	2401943	.	+	0	ID=cds-WP_228724661.1;Parent=gene-PKHYL_RS12770;Dbxref=Genbank:WP_228724661.1;Name=WP_228724661.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005044812.1;locus_tag=PKHYL_RS12770;product=MacB family efflux pump subunit;protein_id=WP_228724661.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2402137	2402212	.	+	.	ID=gene-PKHYL_RS12775;Name=PKHYL_RS12775;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS12775;old_locus_tag=PKHYL_t00320
NZ_AP019516.1	tRNAscan-SE	tRNA	2402137	2402212	.	+	.	ID=rna-PKHYL_RS12775;Parent=gene-PKHYL_RS12775;anticodon=(pos:2402170..2402172);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS12775;product=tRNA-Lys
NZ_AP019516.1	tRNAscan-SE	exon	2402137	2402212	.	+	.	ID=exon-PKHYL_RS12775-1;Parent=rna-PKHYL_RS12775;anticodon=(pos:2402170..2402172);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS12775;product=tRNA-Lys
NZ_AP019516.1	RefSeq	gene	2402415	2402490	.	+	.	ID=gene-PKHYL_RS12780;Name=PKHYL_RS12780;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS12780;old_locus_tag=PKHYL_t00330
NZ_AP019516.1	tRNAscan-SE	tRNA	2402415	2402490	.	+	.	ID=rna-PKHYL_RS12780;Parent=gene-PKHYL_RS12780;anticodon=(pos:2402448..2402450);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS12780;product=tRNA-Lys
NZ_AP019516.1	tRNAscan-SE	exon	2402415	2402490	.	+	.	ID=exon-PKHYL_RS12780-1;Parent=rna-PKHYL_RS12780;anticodon=(pos:2402448..2402450);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS12780;product=tRNA-Lys
NZ_AP019516.1	RefSeq	gene	2402583	2403353	.	-	.	ID=gene-PKHYL_RS12785;Name=PKHYL_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12785;old_locus_tag=PKHYL_31280
NZ_AP019516.1	Protein Homology	CDS	2402583	2403353	.	-	0	ID=cds-WP_240365344.1;Parent=gene-PKHYL_RS12785;Dbxref=Genbank:WP_240365344.1;Name=WP_240365344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198853.1;locus_tag=PKHYL_RS12785;product=MBL fold metallo-hydrolase;protein_id=WP_240365344.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2403609	2405694	.	-	.	ID=gene-PKHYL_RS12790;Name=PKHYL_RS12790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12790;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2403609	2405694	.	-	0	ID=cds-PKHYL_RS12790;Parent=gene-PKHYL_RS12790;Note=frameshifted;Ontology_term=GO:0004096,GO:0020037;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442852.1;locus_tag=PKHYL_RS12790;product=catalase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2406119	2406319	.	+	.	ID=gene-PKHYL_RS12795;Name=PKHYL_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12795;old_locus_tag=PKHYL_31310
NZ_AP019516.1	GeneMarkS-2+	CDS	2406119	2406319	.	+	0	ID=cds-WP_240365345.1;Parent=gene-PKHYL_RS12795;Dbxref=Genbank:WP_240365345.1;Name=WP_240365345.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12795;product=hypothetical protein;protein_id=WP_240365345.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2406313	2406909	.	+	.	ID=gene-PKHYL_RS12800;Name=PKHYL_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12800;old_locus_tag=PKHYL_31320
NZ_AP019516.1	Protein Homology	CDS	2406313	2406909	.	+	0	ID=cds-WP_240365346.1;Parent=gene-PKHYL_RS12800;Dbxref=Genbank:WP_240365346.1;Name=WP_240365346.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF013866.2;locus_tag=PKHYL_RS12800;product=dienelactone hydrolase family protein;protein_id=WP_240365346.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2407009	2407668	.	-	.	ID=gene-PKHYL_RS12805;Name=PKHYL_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12805;old_locus_tag=PKHYL_31330
NZ_AP019516.1	Protein Homology	CDS	2407009	2407668	.	-	0	ID=cds-WP_240365347.1;Parent=gene-PKHYL_RS12805;Dbxref=Genbank:WP_240365347.1;Name=WP_240365347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198839.1;locus_tag=PKHYL_RS12805;product=DUF938 domain-containing protein;protein_id=WP_240365347.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2407736	2408197	.	-	.	ID=gene-PKHYL_RS12810;Name=PKHYL_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12810;old_locus_tag=PKHYL_31340
NZ_AP019516.1	Protein Homology	CDS	2407736	2408197	.	-	0	ID=cds-WP_240365348.1;Parent=gene-PKHYL_RS12810;Dbxref=Genbank:WP_240365348.1;Name=WP_240365348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198836.1;locus_tag=PKHYL_RS12810;product=flavodoxin family protein;protein_id=WP_240365348.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2408202	2408615	.	-	.	ID=gene-PKHYL_RS12815;Name=PKHYL_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12815;old_locus_tag=PKHYL_31350
NZ_AP019516.1	Protein Homology	CDS	2408202	2408615	.	-	0	ID=cds-WP_212563808.1;Parent=gene-PKHYL_RS12815;Dbxref=Genbank:WP_212563808.1;Name=WP_212563808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010198833.1;locus_tag=PKHYL_RS12815;product=OsmC family protein;protein_id=WP_212563808.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2408762	2409502	.	+	.	ID=gene-PKHYL_RS12820;Name=PKHYL_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12820;old_locus_tag=PKHYL_31360
NZ_AP019516.1	Protein Homology	CDS	2408762	2409502	.	+	0	ID=cds-WP_240365349.1;Parent=gene-PKHYL_RS12820;Dbxref=Genbank:WP_240365349.1;Name=WP_240365349.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033545.0;locus_tag=PKHYL_RS12820;product=IS630 family transposase;protein_id=WP_240365349.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2409613	2410011	.	-	.	ID=gene-PKHYL_RS12825;Name=PKHYL_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12825;old_locus_tag=PKHYL_31370
NZ_AP019516.1	GeneMarkS-2+	CDS	2409613	2410011	.	-	0	ID=cds-WP_240365350.1;Parent=gene-PKHYL_RS12825;Dbxref=Genbank:WP_240365350.1;Name=WP_240365350.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12825;product=hypothetical protein;protein_id=WP_240365350.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2410282	2410396	.	-	.	ID=gene-PKHYL_RS12830;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PKHYL_RS12830;old_locus_tag=PKHYL_r00010
NZ_AP019516.1	cmsearch	rRNA	2410282	2410396	.	-	.	ID=rna-PKHYL_RS12830;Parent=gene-PKHYL_RS12830;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS12830;product=5S ribosomal RNA
NZ_AP019516.1	cmsearch	exon	2410282	2410396	.	-	.	ID=exon-PKHYL_RS12830-1;Parent=rna-PKHYL_RS12830;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS12830;product=5S ribosomal RNA
NZ_AP019516.1	RefSeq	gene	2410559	2413415	.	-	.	ID=gene-PKHYL_RS12835;Name=PKHYL_RS12835;gbkey=Gene;gene_biotype=rRNA;locus_tag=PKHYL_RS12835;old_locus_tag=PKHYL_r00020
NZ_AP019516.1	cmsearch	rRNA	2410559	2413415	.	-	.	ID=rna-PKHYL_RS12835;Parent=gene-PKHYL_RS12835;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS12835;product=23S ribosomal RNA
NZ_AP019516.1	cmsearch	exon	2410559	2413415	.	-	.	ID=exon-PKHYL_RS12835-1;Parent=rna-PKHYL_RS12835;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS12835;product=23S ribosomal RNA
NZ_AP019516.1	RefSeq	gene	2413767	2413842	.	-	.	ID=gene-PKHYL_RS12840;Name=PKHYL_RS12840;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS12840;old_locus_tag=PKHYL_t00340
NZ_AP019516.1	tRNAscan-SE	tRNA	2413767	2413842	.	-	.	ID=rna-PKHYL_RS12840;Parent=gene-PKHYL_RS12840;anticodon=(pos:complement(2413807..2413809));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS12840;product=tRNA-Ala
NZ_AP019516.1	tRNAscan-SE	exon	2413767	2413842	.	-	.	ID=exon-PKHYL_RS12840-1;Parent=rna-PKHYL_RS12840;anticodon=(pos:complement(2413807..2413809));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS12840;product=tRNA-Ala
NZ_AP019516.1	RefSeq	gene	2413940	2414016	.	-	.	ID=gene-PKHYL_RS12845;Name=PKHYL_RS12845;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS12845;old_locus_tag=PKHYL_t00350
NZ_AP019516.1	tRNAscan-SE	tRNA	2413940	2414016	.	-	.	ID=rna-PKHYL_RS12845;Parent=gene-PKHYL_RS12845;anticodon=(pos:complement(2413980..2413982));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS12845;product=tRNA-Ile
NZ_AP019516.1	tRNAscan-SE	exon	2413940	2414016	.	-	.	ID=exon-PKHYL_RS12845-1;Parent=rna-PKHYL_RS12845;anticodon=(pos:complement(2413980..2413982));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS12845;product=tRNA-Ile
NZ_AP019516.1	RefSeq	gene	2414090	2415628	.	-	.	ID=gene-PKHYL_RS12850;Name=PKHYL_RS12850;gbkey=Gene;gene_biotype=rRNA;locus_tag=PKHYL_RS12850;old_locus_tag=PKHYL_r00030
NZ_AP019516.1	cmsearch	rRNA	2414090	2415628	.	-	.	ID=rna-PKHYL_RS12850;Parent=gene-PKHYL_RS12850;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS12850;product=16S ribosomal RNA
NZ_AP019516.1	cmsearch	exon	2414090	2415628	.	-	.	ID=exon-PKHYL_RS12850-1;Parent=rna-PKHYL_RS12850;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS12850;product=16S ribosomal RNA
NZ_AP019516.1	RefSeq	gene	2416631	2417434	.	-	.	ID=gene-PKHYL_RS12855;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=PKHYL_RS12855;old_locus_tag=PKHYL_31380
NZ_AP019516.1	Protein Homology	CDS	2416631	2417434	.	-	0	ID=cds-WP_240366535.1;Parent=gene-PKHYL_RS12855;Dbxref=Genbank:WP_240366535.1;Name=WP_240366535.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442844.1;locus_tag=PKHYL_RS12855;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_240366535.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2417583	2417753	.	-	.	ID=gene-PKHYL_RS12860;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=PKHYL_RS12860;old_locus_tag=PKHYL_31390
NZ_AP019516.1	GeneMarkS-2+	CDS	2417583	2417753	.	-	0	ID=cds-WP_240365351.1;Parent=gene-PKHYL_RS12860;Dbxref=Genbank:WP_240365351.1;Name=WP_240365351.1;Ontology_term=GO:0070475,GO:0008649;gbkey=CDS;gene=rlmJ;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA base methylation|0070475||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12860;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_240365351.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2417758	2418270	.	-	.	ID=gene-PKHYL_RS12865;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=PKHYL_RS12865;old_locus_tag=PKHYL_31400
NZ_AP019516.1	Protein Homology	CDS	2417758	2418270	.	-	0	ID=cds-WP_240365352.1;Parent=gene-PKHYL_RS12865;Dbxref=Genbank:WP_240365352.1;Name=WP_240365352.1;Ontology_term=GO:0070475,GO:0008649;gbkey=CDS;gene=rlmJ;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA base methylation|0070475||IEA;inference=COORDINATES: protein motif:HMM:NF016278.2;locus_tag=PKHYL_RS12865;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_240365352.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2418254	2418472	.	-	.	ID=gene-PKHYL_RS12870;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=PKHYL_RS12870;old_locus_tag=PKHYL_31410
NZ_AP019516.1	Protein Homology	CDS	2418254	2418472	.	-	0	ID=cds-WP_240365353.1;Parent=gene-PKHYL_RS12870;Dbxref=Genbank:WP_240365353.1;Name=WP_240365353.1;Ontology_term=GO:0070475,GO:0008649;gbkey=CDS;gene=rlmJ;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA base methylation|0070475||IEA;inference=COORDINATES: protein motif:HMM:NF016278.2;locus_tag=PKHYL_RS12870;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_240365353.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2418613	2419368	.	+	.	ID=gene-PKHYL_RS12875;Name=PKHYL_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12875;old_locus_tag=PKHYL_31420
NZ_AP019516.1	Protein Homology	CDS	2418613	2419368	.	+	0	ID=cds-WP_186474999.1;Parent=gene-PKHYL_RS12875;Dbxref=Genbank:WP_186474999.1;Name=WP_186474999.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512901.1;locus_tag=PKHYL_RS12875;product=2OG-Fe(II) oxygenase;protein_id=WP_186474999.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2419430	2420643	.	+	.	ID=gene-PKHYL_RS12880;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=pseudogene;locus_tag=PKHYL_RS12880;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2419430	2420643	.	+	0	ID=cds-PKHYL_RS12880;Parent=gene-PKHYL_RS12880;Note=frameshifted;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442841.1;locus_tag=PKHYL_RS12880;product=succinyl-diaminopimelate desuccinylase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2420921	2423107	.	+	.	ID=gene-PKHYL_RS12885;Name=PKHYL_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12885;old_locus_tag=PKHYL_31450
NZ_AP019516.1	Protein Homology	CDS	2420921	2423107	.	+	0	ID=cds-WP_071003240.1;Parent=gene-PKHYL_RS12885;Dbxref=Genbank:WP_071003240.1;Name=WP_071003240.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.2;locus_tag=PKHYL_RS12885;product=TonB-dependent receptor;protein_id=WP_071003240.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2423490	2423993	.	-	.	ID=gene-PKHYL_RS12890;Name=PKHYL_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12890;old_locus_tag=PKHYL_31460
NZ_AP019516.1	Protein Homology	CDS	2423490	2423993	.	-	0	ID=cds-WP_186475001.1;Parent=gene-PKHYL_RS12890;Dbxref=Genbank:WP_186475001.1;Name=WP_186475001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512899.1;locus_tag=PKHYL_RS12890;product=GyrI-like domain-containing protein;protein_id=WP_186475001.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2424056	2424265	.	-	.	ID=gene-PKHYL_RS12895;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=PKHYL_RS12895;old_locus_tag=PKHYL_31470
NZ_AP019516.1	Protein Homology	CDS	2424056	2424265	.	-	0	ID=cds-WP_011279849.1;Parent=gene-PKHYL_RS12895;Dbxref=Genbank:WP_011279849.1;Name=WP_011279849.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279849.1;locus_tag=PKHYL_RS12895;product=Fe-S cluster assembly protein IscX;protein_id=WP_011279849.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2424549	2424950	.	-	.	ID=gene-PKHYL_RS12900;Name=PKHYL_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12900;old_locus_tag=PKHYL_31480
NZ_AP019516.1	GeneMarkS-2+	CDS	2424549	2424950	.	-	0	ID=cds-WP_240365354.1;Parent=gene-PKHYL_RS12900;Dbxref=Genbank:WP_240365354.1;Name=WP_240365354.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12900;product=acyl-CoA thioesterase;protein_id=WP_240365354.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2425126	2426507	.	-	.	ID=gene-PKHYL_RS12905;Name=PKHYL_RS12905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12905;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2425126	2426507	.	-	0	ID=cds-PKHYL_RS12905;Parent=gene-PKHYL_RS12905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672928.1;locus_tag=PKHYL_RS12905;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2426541	2426861	.	-	.	ID=gene-PKHYL_RS12910;Name=PKHYL_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12910;old_locus_tag=PKHYL_31510
NZ_AP019516.1	Protein Homology	CDS	2426541	2426861	.	-	0	ID=cds-WP_240366536.1;Parent=gene-PKHYL_RS12910;Dbxref=Genbank:WP_240366536.1;Name=WP_240366536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672929.1;locus_tag=PKHYL_RS12910;product=proton-translocating transhydrogenase family protein;protein_id=WP_240366536.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2426959	2428113	.	-	.	ID=gene-PKHYL_RS12915;Name=PKHYL_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12915;old_locus_tag=PKHYL_31520
NZ_AP019516.1	Protein Homology	CDS	2426959	2428113	.	-	0	ID=cds-WP_240365355.1;Parent=gene-PKHYL_RS12915;Dbxref=Genbank:WP_240365355.1;Name=WP_240365355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442836.1;locus_tag=PKHYL_RS12915;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_240365355.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2428592	2429403	.	+	.	ID=gene-PKHYL_RS12920;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=pseudogene;locus_tag=PKHYL_RS12920;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2428592	2429403	.	+	0	ID=cds-PKHYL_RS12920;Parent=gene-PKHYL_RS12920;Note=frameshifted;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279844.1;locus_tag=PKHYL_RS12920;product=peroxide stress protein YaaA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2429613	2431217	.	-	.	ID=gene-PKHYL_RS12925;Name=groL;gbkey=Gene;gene=groL;gene_biotype=pseudogene;locus_tag=PKHYL_RS12925;old_locus_tag=PKHYL_31550;partial=true;pseudo=true;start_range=.,2429613
NZ_AP019516.1	Protein Homology	CDS	2429613	2431217	.	-	0	ID=cds-PKHYL_RS12925;Parent=gene-PKHYL_RS12925;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959918.1;locus_tag=PKHYL_RS12925;partial=true;product=chaperonin GroEL;pseudo=true;start_range=.,2429613;transl_table=11
NZ_AP019516.1	RefSeq	gene	2431382	2431672	.	-	.	ID=gene-PKHYL_RS12930;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=PKHYL_RS12930;old_locus_tag=PKHYL_31560
NZ_AP019516.1	Protein Homology	CDS	2431382	2431672	.	-	0	ID=cds-WP_058024926.1;Parent=gene-PKHYL_RS12930;Dbxref=Genbank:WP_058024926.1;Name=WP_058024926.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=groES;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007393998.1;locus_tag=PKHYL_RS12930;product=co-chaperone GroES;protein_id=WP_058024926.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2432130	2432885	.	+	.	ID=gene-PKHYL_RS12935;Name=PKHYL_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12935;old_locus_tag=PKHYL_31570
NZ_AP019516.1	Protein Homology	CDS	2432130	2432885	.	+	0	ID=cds-WP_071003777.1;Parent=gene-PKHYL_RS12935;Dbxref=Genbank:WP_071003777.1;Name=WP_071003777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196832.1;locus_tag=PKHYL_RS12935;product=DUF3108 domain-containing protein;protein_id=WP_071003777.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2432998	2433450	.	-	.	ID=gene-PKHYL_RS12940;Name=PKHYL_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12940;old_locus_tag=PKHYL_31580
NZ_AP019516.1	Protein Homology	CDS	2432998	2433450	.	-	0	ID=cds-WP_223334802.1;Parent=gene-PKHYL_RS12940;Dbxref=Genbank:WP_223334802.1;Name=WP_223334802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442832.1;locus_tag=PKHYL_RS12940;product=hypothetical protein;protein_id=WP_223334802.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2433578	2434195	.	-	.	ID=gene-PKHYL_RS12945;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=PKHYL_RS12945;old_locus_tag=PKHYL_31590
NZ_AP019516.1	Protein Homology	CDS	2433578	2434195	.	-	0	ID=cds-WP_075106955.1;Parent=gene-PKHYL_RS12945;Dbxref=Genbank:WP_075106955.1;Name=WP_075106955.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279839.1;locus_tag=PKHYL_RS12945;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_075106955.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2434438	2435291	.	+	.	ID=gene-PKHYL_RS12950;Name=PKHYL_RS12950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12950;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2434438	2435291	.	+	0	ID=cds-PKHYL_RS12950;Parent=gene-PKHYL_RS12950;Note=frameshifted;Ontology_term=GO:0008150,GO:0003674,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: protein motif:HMM:TIGR00765.1;locus_tag=PKHYL_RS12950;product=YihY family inner membrane protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2435315	2435752	.	+	.	ID=gene-PKHYL_RS12955;Name=PKHYL_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12955;old_locus_tag=PKHYL_31620
NZ_AP019516.1	GeneMarkS-2+	CDS	2435315	2435752	.	+	0	ID=cds-WP_240365356.1;Parent=gene-PKHYL_RS12955;Dbxref=Genbank:WP_240365356.1;Name=WP_240365356.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12955;product=hypothetical protein;protein_id=WP_240365356.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2436223	2438909	.	+	.	ID=gene-PKHYL_RS12960;Name=PKHYL_RS12960;end_range=2438909,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12960;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2436223	2438909	.	+	0	ID=cds-PKHYL_RS12960;Parent=gene-PKHYL_RS12960;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2438909,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009508550.1;locus_tag=PKHYL_RS12960;partial=true;product=M66 family metalloprotease;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2439369	2440661	.	+	.	ID=gene-PKHYL_RS12965;Name=PKHYL_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12965;old_locus_tag=PKHYL_31680
NZ_AP019516.1	Protein Homology	CDS	2439369	2440661	.	+	0	ID=cds-WP_240365357.1;Parent=gene-PKHYL_RS12965;Dbxref=Genbank:WP_240365357.1;Name=WP_240365357.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021524.2;locus_tag=PKHYL_RS12965;product=DUF2254 domain-containing protein;protein_id=WP_240365357.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2440666	2440938	.	+	.	ID=gene-PKHYL_RS12970;Name=PKHYL_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12970;old_locus_tag=PKHYL_31690
NZ_AP019516.1	GeneMarkS-2+	CDS	2440666	2440938	.	+	0	ID=cds-WP_240365358.1;Parent=gene-PKHYL_RS12970;Dbxref=Genbank:WP_240365358.1;Name=WP_240365358.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS12970;product=hypothetical protein;protein_id=WP_240365358.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2441077	2441787	.	+	.	ID=gene-PKHYL_RS17740;Name=PKHYL_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17740;old_locus_tag=PKHYL_31700
NZ_AP019516.1	Protein Homology	CDS	2441077	2441787	.	+	0	ID=cds-WP_269778177.1;Parent=gene-PKHYL_RS17740;Dbxref=Genbank:WP_269778177.1;Name=WP_269778177.1;Ontology_term=GO:0006812,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013188.2;locus_tag=PKHYL_RS17740;product=cation:proton antiporter;protein_id=WP_269778177.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2441732	2442352	.	+	.	ID=gene-PKHYL_RS17745;Name=PKHYL_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17745;old_locus_tag=PKHYL_31710
NZ_AP019516.1	Protein Homology	CDS	2441732	2442352	.	+	0	ID=cds-WP_269778178.1;Parent=gene-PKHYL_RS17745;Dbxref=Genbank:WP_269778178.1;Name=WP_269778178.1;Ontology_term=GO:0006812,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013188.2;locus_tag=PKHYL_RS17745;product=cation:proton antiporter;protein_id=WP_269778178.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2442440	2442925	.	-	.	ID=gene-PKHYL_RS12980;Name=PKHYL_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12980;old_locus_tag=PKHYL_31720
NZ_AP019516.1	Protein Homology	CDS	2442440	2442925	.	-	0	ID=cds-WP_227517148.1;Parent=gene-PKHYL_RS12980;Dbxref=Genbank:WP_227517148.1;Name=WP_227517148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673895.1;locus_tag=PKHYL_RS12980;product=DUF2127 domain-containing protein;protein_id=WP_227517148.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2442982	2444076	.	-	.	ID=gene-PKHYL_RS12985;Name=PKHYL_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12985;old_locus_tag=PKHYL_31730
NZ_AP019516.1	Protein Homology	CDS	2442982	2444076	.	-	0	ID=cds-WP_240366537.1;Parent=gene-PKHYL_RS12985;Dbxref=Genbank:WP_240366537.1;Name=WP_240366537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442826.1;locus_tag=PKHYL_RS12985;product=dihydroorotase;protein_id=WP_240366537.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2444252	2445324	.	-	.	ID=gene-PKHYL_RS12990;Name=PKHYL_RS12990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS12990;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2444252	2445324	.	-	0	ID=cds-PKHYL_RS12990;Parent=gene-PKHYL_RS12990;Note=frameshifted;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196811.1;locus_tag=PKHYL_RS12990;product=aspartate carbamoyltransferase catalytic subunit;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2445710	2446693	.	+	.	ID=gene-PKHYL_RS12995;Name=PKHYL_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS12995;old_locus_tag=PKHYL_31760
NZ_AP019516.1	Protein Homology	CDS	2445710	2446693	.	+	0	ID=cds-WP_240365359.1;Parent=gene-PKHYL_RS12995;Dbxref=Genbank:WP_240365359.1;Name=WP_240365359.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196809.1;locus_tag=PKHYL_RS12995;product=class 1 fructose-bisphosphatase;protein_id=WP_240365359.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2446787	2447580	.	+	.	ID=gene-PKHYL_RS13000;Name=PKHYL_RS13000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13000;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2446787	2447580	.	+	0	ID=cds-PKHYL_RS13000;Parent=gene-PKHYL_RS13000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442824.1;locus_tag=PKHYL_RS13000;product=RNA methyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2447793	2448723	.	-	.	ID=gene-PKHYL_RS13005;Name=PKHYL_RS13005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13005;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2447793	2448723	.	-	0	ID=cds-PKHYL_RS13005;Parent=gene-PKHYL_RS13005;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013197050.1;locus_tag=PKHYL_RS13005;product=FAD-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2448875	2449623	.	-	.	ID=gene-PKHYL_RS13010;Name=PKHYL_RS13010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13010;old_locus_tag=PKHYL_31810;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2448875	2449623	.	-	0	ID=cds-PKHYL_RS13010;Parent=gene-PKHYL_RS13010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016140229.1;locus_tag=PKHYL_RS13010;product=electron transfer flavoprotein subunit beta/FixA family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2450081	2450644	.	-	.	ID=gene-PKHYL_RS13015;Name=PKHYL_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13015;old_locus_tag=PKHYL_31830
NZ_AP019516.1	Protein Homology	CDS	2450081	2450644	.	-	0	ID=cds-WP_240365360.1;Parent=gene-PKHYL_RS13015;Dbxref=Genbank:WP_240365360.1;Name=WP_240365360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395908.1;locus_tag=PKHYL_RS13015;product=DUF421 domain-containing protein;protein_id=WP_240365360.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2450884	2451095	.	-	.	ID=gene-PKHYL_RS13020;Name=PKHYL_RS13020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13020;old_locus_tag=PKHYL_31840;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2450884	2451095	.	-	0	ID=cds-PKHYL_RS13020;Parent=gene-PKHYL_RS13020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656932.1;locus_tag=PKHYL_RS13020;product=cold-shock protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2451584	2451796	.	-	.	ID=gene-PKHYL_RS13025;Name=PKHYL_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13025;old_locus_tag=PKHYL_31850
NZ_AP019516.1	GeneMarkS-2+	CDS	2451584	2451796	.	-	0	ID=cds-WP_240365362.1;Parent=gene-PKHYL_RS13025;Dbxref=Genbank:WP_240365362.1;Name=WP_240365362.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13025;product=hypothetical protein;protein_id=WP_240365362.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2452149	2453163	.	-	.	ID=gene-PKHYL_RS13030;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=pseudogene;locus_tag=PKHYL_RS13030;old_locus_tag=PKHYL_31860;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2452149	2453163	.	-	0	ID=cds-PKHYL_RS13030;Parent=gene-PKHYL_RS13030;Note=frameshifted;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997723.1;locus_tag=PKHYL_RS13030;product=ketol-acid reductoisomerase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2453303	2453800	.	-	.	ID=gene-PKHYL_RS13035;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=PKHYL_RS13035;old_locus_tag=PKHYL_31880
NZ_AP019516.1	Protein Homology	CDS	2453303	2453800	.	-	0	ID=cds-WP_071003178.1;Parent=gene-PKHYL_RS13035;Dbxref=Genbank:WP_071003178.1;Name=WP_071003178.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512877.1;locus_tag=PKHYL_RS13035;product=acetolactate synthase small subunit;protein_id=WP_071003178.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2453813	2455512	.	-	.	ID=gene-PKHYL_RS13040;Name=PKHYL_RS13040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13040;partial=true;pseudo=true;start_range=.,2453813
NZ_AP019516.1	Protein Homology	CDS	2453813	2455512	.	-	0	ID=cds-PKHYL_RS13040;Parent=gene-PKHYL_RS13040;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512876.1;locus_tag=PKHYL_RS13040;partial=true;product=acetolactate synthase 3 large subunit;pseudo=true;start_range=.,2453813;transl_table=11
NZ_AP019516.1	RefSeq	gene	2456477	2456974	.	+	.	ID=gene-PKHYL_RS13045;Name=PKHYL_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13045;old_locus_tag=PKHYL_31930
NZ_AP019516.1	Protein Homology	CDS	2456477	2456974	.	+	0	ID=cds-WP_240365363.1;Parent=gene-PKHYL_RS13045;Dbxref=Genbank:WP_240365363.1;Name=WP_240365363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196759.1;locus_tag=PKHYL_RS13045;product=DUF4124 domain-containing protein;protein_id=WP_240365363.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2456993	2458816	.	-	.	ID=gene-PKHYL_RS13050;Name=PKHYL_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13050;old_locus_tag=PKHYL_31940
NZ_AP019516.1	Protein Homology	CDS	2456993	2458816	.	-	0	ID=cds-WP_240365364.1;Parent=gene-PKHYL_RS13050;Dbxref=Genbank:WP_240365364.1;Name=WP_240365364.1;Ontology_term=GO:0052855;gbkey=CDS;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512874.1;locus_tag=PKHYL_RS13050;product=NAD(P)H-hydrate dehydratase;protein_id=WP_240365364.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2459053	2460215	.	+	.	ID=gene-PKHYL_RS13055;Name=queG;gbkey=Gene;gene=queG;gene_biotype=pseudogene;locus_tag=PKHYL_RS13055;old_locus_tag=PKHYL_31950;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2459053	2460215	.	+	0	ID=cds-PKHYL_RS13055;Parent=gene-PKHYL_RS13055;Note=frameshifted;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196756.1;locus_tag=PKHYL_RS13055;product=tRNA epoxyqueuosine(34) reductase QueG;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2460354	2460863	.	-	.	ID=gene-PKHYL_RS13060;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=PKHYL_RS13060;old_locus_tag=PKHYL_31970
NZ_AP019516.1	Protein Homology	CDS	2460354	2460863	.	-	0	ID=cds-WP_071003170.1;Parent=gene-PKHYL_RS13060;Dbxref=Genbank:WP_071003170.1;Name=WP_071003170.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196747.1;locus_tag=PKHYL_RS13060;product=peptidoglycan-binding protein LysM;protein_id=WP_071003170.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2461122	2461358	.	-	.	ID=gene-PKHYL_RS13065;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=PKHYL_RS13065;old_locus_tag=PKHYL_31980
NZ_AP019516.1	Protein Homology	CDS	2461122	2461358	.	-	0	ID=cds-WP_071003168.1;Parent=gene-PKHYL_RS13065;Dbxref=Genbank:WP_071003168.1;Name=WP_071003168.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196746.1;locus_tag=PKHYL_RS13065;product=acyl carrier protein;protein_id=WP_071003168.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2461623	2462351	.	-	.	ID=gene-PKHYL_RS13070;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=PKHYL_RS13070;old_locus_tag=PKHYL_31990
NZ_AP019516.1	Protein Homology	CDS	2461623	2462351	.	-	0	ID=cds-WP_058025367.1;Parent=gene-PKHYL_RS13070;Dbxref=Genbank:WP_058025367.1;Name=WP_058025367.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394215.1;locus_tag=PKHYL_RS13070;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_058025367.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2462348	2463232	.	-	.	ID=gene-PKHYL_RS13075;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=PKHYL_RS13075;old_locus_tag=PKHYL_32000
NZ_AP019516.1	Protein Homology	CDS	2462348	2463232	.	-	0	ID=cds-WP_240365365.1;Parent=gene-PKHYL_RS13075;Dbxref=Genbank:WP_240365365.1;Name=WP_240365365.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019671663.1;locus_tag=PKHYL_RS13075;product=ACP S-malonyltransferase;protein_id=WP_240365365.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2463738	2463878	.	-	.	ID=gene-PKHYL_RS13080;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=PKHYL_RS13080;old_locus_tag=PKHYL_32010
NZ_AP019516.1	Protein Homology	CDS	2463738	2463878	.	-	0	ID=cds-WP_240365366.1;Parent=gene-PKHYL_RS13080;Dbxref=Genbank:WP_240365366.1;Name=WP_240365366.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005151049.1;locus_tag=PKHYL_RS13080;product=50S ribosomal protein L32;protein_id=WP_240365366.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2464236	2464829	.	-	.	ID=gene-PKHYL_RS13085;Name=PKHYL_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13085;old_locus_tag=PKHYL_32020
NZ_AP019516.1	Protein Homology	CDS	2464236	2464829	.	-	0	ID=cds-WP_071003164.1;Parent=gene-PKHYL_RS13085;Dbxref=Genbank:WP_071003164.1;Name=WP_071003164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279812.1;locus_tag=PKHYL_RS13085;product=YceD family protein;protein_id=WP_071003164.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2465012	2465755	.	+	.	ID=gene-PKHYL_RS13090;Name=PKHYL_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13090;old_locus_tag=PKHYL_32030
NZ_AP019516.1	Protein Homology	CDS	2465012	2465755	.	+	0	ID=cds-WP_071003162.1;Parent=gene-PKHYL_RS13090;Dbxref=Genbank:WP_071003162.1;Name=WP_071003162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442815.1;locus_tag=PKHYL_RS13090;product=elongation factor P hydroxylase;protein_id=WP_071003162.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2465988	2466608	.	+	.	ID=gene-PKHYL_RS13095;Name=PKHYL_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13095;old_locus_tag=PKHYL_32040
NZ_AP019516.1	Protein Homology	CDS	2465988	2466608	.	+	0	ID=cds-WP_071003160.1;Parent=gene-PKHYL_RS13095;Dbxref=Genbank:WP_071003160.1;Name=WP_071003160.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196739.1;locus_tag=PKHYL_RS13095;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_071003160.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2466811	2467170	.	-	.	ID=gene-PKHYL_RS13100;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=PKHYL_RS13100;old_locus_tag=PKHYL_32050
NZ_AP019516.1	Protein Homology	CDS	2466811	2467170	.	-	0	ID=cds-WP_025644362.1;Parent=gene-PKHYL_RS13100;Dbxref=Genbank:WP_025644362.1;Name=WP_025644362.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959733.1;locus_tag=PKHYL_RS13100;product=50S ribosomal protein L17;protein_id=WP_025644362.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2467190	2468197	.	-	.	ID=gene-PKHYL_RS13105;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=PKHYL_RS13105;old_locus_tag=PKHYL_32060
NZ_AP019516.1	Protein Homology	CDS	2467190	2468197	.	-	0	ID=cds-WP_071003158.1;Parent=gene-PKHYL_RS13105;Dbxref=Genbank:WP_071003158.1;Name=WP_071003158.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996784.1;locus_tag=PKHYL_RS13105;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_071003158.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2468279	2468920	.	-	.	ID=gene-PKHYL_RS13110;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=PKHYL_RS13110;old_locus_tag=PKHYL_32070
NZ_AP019516.1	Protein Homology	CDS	2468279	2468920	.	-	0	ID=cds-WP_025644367.1;Parent=gene-PKHYL_RS13110;Dbxref=Genbank:WP_025644367.1;Name=WP_025644367.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924159.1;locus_tag=PKHYL_RS13110;product=30S ribosomal protein S4;protein_id=WP_025644367.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2468969	2469358	.	-	.	ID=gene-PKHYL_RS13115;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=PKHYL_RS13115;old_locus_tag=PKHYL_32080
NZ_AP019516.1	Protein Homology	CDS	2468969	2469358	.	-	0	ID=cds-WP_025644368.1;Parent=gene-PKHYL_RS13115;Dbxref=Genbank:WP_025644368.1;Name=WP_025644368.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=PKHYL_RS13115;product=30S ribosomal protein S11;protein_id=WP_025644368.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2469379	2469735	.	-	.	ID=gene-PKHYL_RS13120;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=PKHYL_RS13120;old_locus_tag=PKHYL_32090
NZ_AP019516.1	Protein Homology	CDS	2469379	2469735	.	-	0	ID=cds-WP_025644369.1;Parent=gene-PKHYL_RS13120;Dbxref=Genbank:WP_025644369.1;Name=WP_025644369.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996787.1;locus_tag=PKHYL_RS13120;product=30S ribosomal protein S13;protein_id=WP_025644369.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2469999	2470115	.	-	.	ID=gene-PKHYL_RS13125;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=PKHYL_RS13125
NZ_AP019516.1	Protein Homology	CDS	2469999	2470115	.	-	0	ID=cds-WP_025644371.1;Parent=gene-PKHYL_RS13125;Dbxref=Genbank:WP_025644371.1;Name=WP_025644371.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=PKHYL_RS13125;product=50S ribosomal protein L36;protein_id=WP_025644371.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2470147	2471477	.	-	.	ID=gene-PKHYL_RS13130;Name=secY;gbkey=Gene;gene=secY;gene_biotype=pseudogene;locus_tag=PKHYL_RS13130;old_locus_tag=PKHYL_32100;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2470147	2471477	.	-	0	ID=cds-PKHYL_RS13130;Parent=gene-PKHYL_RS13130;Note=frameshifted;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512863.1;locus_tag=PKHYL_RS13130;product=preprotein translocase subunit SecY;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2471497	2471938	.	-	.	ID=gene-PKHYL_RS13135;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=pseudogene;locus_tag=PKHYL_RS13135;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2471497	2471938	.	-	0	ID=cds-PKHYL_RS13135;Parent=gene-PKHYL_RS13135;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005012960.1;locus_tag=PKHYL_RS13135;product=50S ribosomal protein L15;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2471938	2472108	.	-	.	ID=gene-PKHYL_RS13140;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=PKHYL_RS13140;old_locus_tag=PKHYL_32140
NZ_AP019516.1	Protein Homology	CDS	2471938	2472108	.	-	0	ID=cds-WP_240365367.1;Parent=gene-PKHYL_RS13140;Dbxref=Genbank:WP_240365367.1;Name=WP_240365367.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959727.1;locus_tag=PKHYL_RS13140;product=50S ribosomal protein L30;protein_id=WP_240365367.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2472137	2472652	.	-	.	ID=gene-PKHYL_RS13145;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=PKHYL_RS13145;old_locus_tag=PKHYL_32150
NZ_AP019516.1	Protein Homology	CDS	2472137	2472652	.	-	0	ID=cds-WP_071003153.1;Parent=gene-PKHYL_RS13145;Dbxref=Genbank:WP_071003153.1;Name=WP_071003153.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196711.1;locus_tag=PKHYL_RS13145;product=30S ribosomal protein S5;protein_id=WP_071003153.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2472655	2473006	.	-	.	ID=gene-PKHYL_RS13150;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=pseudogene;locus_tag=PKHYL_RS13150;old_locus_tag=PKHYL_32160;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2472655	2473006	.	-	0	ID=cds-PKHYL_RS13150;Parent=gene-PKHYL_RS13150;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996793.1;locus_tag=PKHYL_RS13150;product=50S ribosomal protein L18;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2473018	2473552	.	-	.	ID=gene-PKHYL_RS13155;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=pseudogene;locus_tag=PKHYL_RS13155;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2473018	2473552	.	-	0	ID=cds-PKHYL_RS13155;Parent=gene-PKHYL_RS13155;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=PKHYL_RS13155;product=50S ribosomal protein L6;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2473729	2474127	.	-	.	ID=gene-PKHYL_RS13160;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=PKHYL_RS13160;old_locus_tag=PKHYL_32190
NZ_AP019516.1	Protein Homology	CDS	2473729	2474127	.	-	0	ID=cds-WP_058025570.1;Parent=gene-PKHYL_RS13160;Dbxref=Genbank:WP_058025570.1;Name=WP_058025570.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011201192.1;locus_tag=PKHYL_RS13160;product=30S ribosomal protein S8;protein_id=WP_058025570.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2474188	2474400	.	-	.	ID=gene-PKHYL_RS13165;Name=PKHYL_RS13165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13165;old_locus_tag=PKHYL_32200;partial=true;pseudo=true;start_range=.,2474188
NZ_AP019516.1	Protein Homology	CDS	2474188	2474400	.	-	0	ID=cds-PKHYL_RS13165;Parent=gene-PKHYL_RS13165;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012477.2;locus_tag=PKHYL_RS13165;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2474188;transl_table=11
NZ_AP019516.1	RefSeq	gene	2474458	2474994	.	-	.	ID=gene-PKHYL_RS13170;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=PKHYL_RS13170;old_locus_tag=PKHYL_32210
NZ_AP019516.1	Protein Homology	CDS	2474458	2474994	.	-	0	ID=cds-WP_057758706.1;Parent=gene-PKHYL_RS13170;Dbxref=Genbank:WP_057758706.1;Name=WP_057758706.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996797.1;locus_tag=PKHYL_RS13170;product=50S ribosomal protein L5;protein_id=WP_057758706.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2475016	2475333	.	-	.	ID=gene-PKHYL_RS13175;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=PKHYL_RS13175;old_locus_tag=PKHYL_32220
NZ_AP019516.1	Protein Homology	CDS	2475016	2475333	.	-	0	ID=cds-WP_058025572.1;Parent=gene-PKHYL_RS13175;Dbxref=Genbank:WP_058025572.1;Name=WP_058025572.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512857.1;locus_tag=PKHYL_RS13175;product=50S ribosomal protein L24;protein_id=WP_058025572.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2475342	2475710	.	-	.	ID=gene-PKHYL_RS13180;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=PKHYL_RS13180;old_locus_tag=PKHYL_32230
NZ_AP019516.1	Protein Homology	CDS	2475342	2475710	.	-	0	ID=cds-WP_010196702.1;Parent=gene-PKHYL_RS13180;Dbxref=Genbank:WP_010196702.1;Name=WP_010196702.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=PKHYL_RS13180;product=50S ribosomal protein L14;protein_id=WP_010196702.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2475894	2476169	.	-	.	ID=gene-PKHYL_RS13185;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=PKHYL_RS13185;old_locus_tag=PKHYL_32240
NZ_AP019516.1	Protein Homology	CDS	2475894	2476169	.	-	0	ID=cds-WP_021813375.1;Parent=gene-PKHYL_RS13185;Dbxref=Genbank:WP_021813375.1;Name=WP_021813375.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512856.1;locus_tag=PKHYL_RS13185;product=30S ribosomal protein S17;protein_id=WP_021813375.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2476166	2476363	.	-	.	ID=gene-PKHYL_RS13190;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=PKHYL_RS13190;old_locus_tag=PKHYL_32250
NZ_AP019516.1	Protein Homology	CDS	2476166	2476363	.	-	0	ID=cds-WP_025644397.1;Parent=gene-PKHYL_RS13190;Dbxref=Genbank:WP_025644397.1;Name=WP_025644397.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656979.1;locus_tag=PKHYL_RS13190;product=50S ribosomal protein L29;protein_id=WP_025644397.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2476363	2476777	.	-	.	ID=gene-PKHYL_RS13195;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=pseudogene;locus_tag=PKHYL_RS13195;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2476363	2476777	.	-	0	ID=cds-PKHYL_RS13195;Parent=gene-PKHYL_RS13195;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=PKHYL_RS13195;product=50S ribosomal protein L16;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2476781	2477509	.	-	.	ID=gene-PKHYL_RS13200;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=PKHYL_RS13200;old_locus_tag=PKHYL_32280
NZ_AP019516.1	Protein Homology	CDS	2476781	2477509	.	-	0	ID=cds-WP_240365368.1;Parent=gene-PKHYL_RS13200;Dbxref=Genbank:WP_240365368.1;Name=WP_240365368.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512854.1;locus_tag=PKHYL_RS13200;product=30S ribosomal protein S3;protein_id=WP_240365368.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2477513	2477841	.	-	.	ID=gene-PKHYL_RS13205;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=pseudogene;locus_tag=PKHYL_RS13205;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2477513	2477841	.	-	0	ID=cds-PKHYL_RS13205;Parent=gene-PKHYL_RS13205;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656983.1;locus_tag=PKHYL_RS13205;product=50S ribosomal protein L22;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2477851	2478114	.	-	.	ID=gene-PKHYL_RS13210;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=pseudogene;locus_tag=PKHYL_RS13210;partial=true;pseudo=true;start_range=.,2477851
NZ_AP019516.1	Protein Homology	CDS	2477851	2478114	.	-	0	ID=cds-PKHYL_RS13210;Parent=gene-PKHYL_RS13210;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=PKHYL_RS13210;partial=true;product=30S ribosomal protein S19;pseudo=true;start_range=.,2477851;transl_table=11
NZ_AP019516.1	RefSeq	gene	2478138	2478965	.	-	.	ID=gene-PKHYL_RS13215;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=PKHYL_RS13215;old_locus_tag=PKHYL_32300
NZ_AP019516.1	Protein Homology	CDS	2478138	2478965	.	-	0	ID=cds-WP_058025575.1;Parent=gene-PKHYL_RS13215;Dbxref=Genbank:WP_058025575.1;Name=WP_058025575.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003674247.1;locus_tag=PKHYL_RS13215;product=50S ribosomal protein L2;protein_id=WP_058025575.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2478977	2479327	.	-	.	ID=gene-PKHYL_RS13220;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=PKHYL_RS13220;old_locus_tag=PKHYL_32310
NZ_AP019516.1	Protein Homology	CDS	2478977	2479327	.	-	0	ID=cds-WP_071003149.1;Parent=gene-PKHYL_RS13220;Dbxref=Genbank:WP_071003149.1;Name=WP_071003149.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279789.1;locus_tag=PKHYL_RS13220;product=50S ribosomal protein L23;protein_id=WP_071003149.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2479324	2479926	.	-	.	ID=gene-PKHYL_RS13225;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=PKHYL_RS13225;old_locus_tag=PKHYL_32320
NZ_AP019516.1	Protein Homology	CDS	2479324	2479926	.	-	0	ID=cds-WP_058025577.1;Parent=gene-PKHYL_RS13225;Dbxref=Genbank:WP_058025577.1;Name=WP_058025577.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656988.1;locus_tag=PKHYL_RS13225;product=50S ribosomal protein L4;protein_id=WP_058025577.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2479941	2480578	.	-	.	ID=gene-PKHYL_RS13230;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=pseudogene;locus_tag=PKHYL_RS13230;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2479941	2480578	.	-	0	ID=cds-PKHYL_RS13230;Parent=gene-PKHYL_RS13230;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996809.1;locus_tag=PKHYL_RS13230;product=50S ribosomal protein L3;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2480628	2480939	.	-	.	ID=gene-PKHYL_RS13235;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=PKHYL_RS13235;old_locus_tag=PKHYL_32350
NZ_AP019516.1	Protein Homology	CDS	2480628	2480939	.	-	0	ID=cds-WP_010196670.1;Parent=gene-PKHYL_RS13235;Dbxref=Genbank:WP_010196670.1;Name=WP_010196670.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=PKHYL_RS13235;product=30S ribosomal protein S10;protein_id=WP_010196670.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2481348	2482049	.	-	.	ID=gene-PKHYL_RS13240;Name=PKHYL_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13240;old_locus_tag=PKHYL_32360
NZ_AP019516.1	Protein Homology	CDS	2481348	2482049	.	-	0	ID=cds-WP_240365369.1;Parent=gene-PKHYL_RS13240;Dbxref=Genbank:WP_240365369.1;Name=WP_240365369.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: protein motif:HMM:NF021653.2;locus_tag=PKHYL_RS13240;product=ribonuclease E/G;protein_id=WP_240365369.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2481980	2482951	.	-	.	ID=gene-PKHYL_RS13245;Name=PKHYL_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13245;old_locus_tag=PKHYL_32370
NZ_AP019516.1	Protein Homology	CDS	2481980	2482951	.	-	0	ID=cds-WP_240365370.1;Parent=gene-PKHYL_RS13245;Dbxref=Genbank:WP_240365370.1;Name=WP_240365370.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: protein motif:HMM:NF021653.2;locus_tag=PKHYL_RS13245;product=ribonuclease E/G;protein_id=WP_240365370.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2483072	2483758	.	-	.	ID=gene-PKHYL_RS13250;Name=PKHYL_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13250;old_locus_tag=PKHYL_32380
NZ_AP019516.1	Protein Homology	CDS	2483072	2483758	.	-	0	ID=cds-WP_071003143.1;Parent=gene-PKHYL_RS13250;Dbxref=Genbank:WP_071003143.1;Name=WP_071003143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394250.1;locus_tag=PKHYL_RS13250;product=Maf family protein;protein_id=WP_071003143.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2483833	2484318	.	-	.	ID=gene-PKHYL_RS13255;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=PKHYL_RS13255;old_locus_tag=PKHYL_32390
NZ_AP019516.1	Protein Homology	CDS	2483833	2484318	.	-	0	ID=cds-WP_071003141.1;Parent=gene-PKHYL_RS13255;Dbxref=Genbank:WP_071003141.1;Name=WP_071003141.1;Ontology_term=GO:0008360,GO:0003674;gbkey=CDS;gene=mreD;go_function=molecular_function|0003674||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020442810.1;locus_tag=PKHYL_RS13255;product=rod shape-determining protein MreD;protein_id=WP_071003141.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2484451	2485306	.	-	.	ID=gene-PKHYL_RS13260;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=pseudogene;locus_tag=PKHYL_RS13260;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2484451	2485306	.	-	0	ID=cds-PKHYL_RS13260;Parent=gene-PKHYL_RS13260;Note=frameshifted;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196660.1;locus_tag=PKHYL_RS13260;product=rod shape-determining protein MreC;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2485538	2486574	.	-	.	ID=gene-PKHYL_RS13265;Name=PKHYL_RS13265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13265;old_locus_tag=PKHYL_32420;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2485538	2486574	.	-	0	ID=cds-PKHYL_RS13265;Parent=gene-PKHYL_RS13265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116007.1;locus_tag=PKHYL_RS13265;product=rod shape-determining protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2487193	2487507	.	+	.	ID=gene-PKHYL_RS13270;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=PKHYL_RS13270;old_locus_tag=PKHYL_32440
NZ_AP019516.1	Protein Homology	CDS	2487193	2487507	.	+	0	ID=cds-WP_071003135.1;Parent=gene-PKHYL_RS13270;Dbxref=Genbank:WP_071003135.1;Name=WP_071003135.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010196657.1;locus_tag=PKHYL_RS13270;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_071003135.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2487589	2489072	.	+	.	ID=gene-PKHYL_RS13275;Name=gatA;end_range=2489072,.;gbkey=Gene;gene=gatA;gene_biotype=pseudogene;locus_tag=PKHYL_RS13275;old_locus_tag=PKHYL_32450;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2487589	2489072	.	+	0	ID=cds-PKHYL_RS13275;Parent=gene-PKHYL_RS13275;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006424,GO:0050567,GO:0030956;end_range=2489072,.;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279780.1;locus_tag=PKHYL_RS13275;partial=true;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2489085	2490614	.	+	.	ID=gene-PKHYL_RS13280;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=pseudogene;locus_tag=PKHYL_RS13280;old_locus_tag=PKHYL_32460;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2489085	2490614	.	+	0	ID=cds-PKHYL_RS13280;Parent=gene-PKHYL_RS13280;Note=frameshifted;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011512843.1;locus_tag=PKHYL_RS13280;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2490729	2490805	.	+	.	ID=gene-PKHYL_RS13290;Name=PKHYL_RS13290;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS13290;old_locus_tag=PKHYL_t00360
NZ_AP019516.1	tRNAscan-SE	tRNA	2490729	2490805	.	+	.	ID=rna-PKHYL_RS13290;Parent=gene-PKHYL_RS13290;anticodon=(pos:2490763..2490765);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS13290;product=tRNA-Pro
NZ_AP019516.1	tRNAscan-SE	exon	2490729	2490805	.	+	.	ID=exon-PKHYL_RS13290-1;Parent=rna-PKHYL_RS13290;anticodon=(pos:2490763..2490765);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS13290;product=tRNA-Pro
NZ_AP019516.1	RefSeq	gene	2490969	2492210	.	+	.	ID=gene-PKHYL_RS13295;Name=PKHYL_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13295;old_locus_tag=PKHYL_32480
NZ_AP019516.1	Protein Homology	CDS	2490969	2492210	.	+	0	ID=cds-WP_071003131.1;Parent=gene-PKHYL_RS13295;Dbxref=Genbank:WP_071003131.1;Name=WP_071003131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513958.1;locus_tag=PKHYL_RS13295;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_071003131.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2492270	2492551	.	+	.	ID=gene-PKHYL_RS13300;Name=PKHYL_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13300;old_locus_tag=PKHYL_32490
NZ_AP019516.1	Protein Homology	CDS	2492270	2492551	.	+	0	ID=cds-WP_240365371.1;Parent=gene-PKHYL_RS13300;Dbxref=Genbank:WP_240365371.1;Name=WP_240365371.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019540.2;locus_tag=PKHYL_RS13300;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_240365371.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2492571	2492918	.	+	.	ID=gene-PKHYL_RS13305;Name=PKHYL_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13305;old_locus_tag=PKHYL_32500
NZ_AP019516.1	Protein Homology	CDS	2492571	2492918	.	+	0	ID=cds-WP_071003129.1;Parent=gene-PKHYL_RS13305;Dbxref=Genbank:WP_071003129.1;Name=WP_071003129.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017355.2;locus_tag=PKHYL_RS13305;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_071003129.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2493027	2493647	.	+	.	ID=gene-PKHYL_RS13310;Name=PKHYL_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13310;old_locus_tag=PKHYL_32510
NZ_AP019516.1	GeneMarkS-2+	CDS	2493027	2493647	.	+	0	ID=cds-WP_071003128.1;Parent=gene-PKHYL_RS13310;Dbxref=Genbank:WP_071003128.1;Name=WP_071003128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13310;product=hypothetical protein;protein_id=WP_071003128.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2493653	2494072	.	+	.	ID=gene-PKHYL_RS13315;Name=PKHYL_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13315;old_locus_tag=PKHYL_32520
NZ_AP019516.1	Protein Homology	CDS	2493653	2494072	.	+	0	ID=cds-WP_240365372.1-4;Parent=gene-PKHYL_RS13315;Dbxref=Genbank:WP_240365372.1;Name=WP_240365372.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025000.2;locus_tag=PKHYL_RS13315;product=transposase family protein;protein_id=WP_240365372.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2494032	2494484	.	+	.	ID=gene-PKHYL_RS13320;Name=PKHYL_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13320;old_locus_tag=PKHYL_32530
NZ_AP019516.1	Protein Homology	CDS	2494032	2494484	.	+	0	ID=cds-WP_240365373.1-3;Parent=gene-PKHYL_RS13320;Dbxref=Genbank:WP_240365373.1;Name=WP_240365373.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF024752.2;locus_tag=PKHYL_RS13320;product=transposase;protein_id=WP_240365373.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2494481	2495155	.	+	.	ID=gene-PKHYL_RS13325;Name=PKHYL_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13325;old_locus_tag=PKHYL_32540
NZ_AP019516.1	GeneMarkS-2+	CDS	2494481	2495155	.	+	0	ID=cds-WP_240365374.1;Parent=gene-PKHYL_RS13325;Dbxref=Genbank:WP_240365374.1;Name=WP_240365374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13325;product=hypothetical protein;protein_id=WP_240365374.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2495567	2496007	.	-	.	ID=gene-PKHYL_RS13330;Name=PKHYL_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13330;old_locus_tag=PKHYL_32550
NZ_AP019516.1	GeneMarkS-2+	CDS	2495567	2496007	.	-	0	ID=cds-WP_071003125.1;Parent=gene-PKHYL_RS13330;Dbxref=Genbank:WP_071003125.1;Name=WP_071003125.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13330;product=hypothetical protein;protein_id=WP_071003125.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2496096	2496377	.	-	.	ID=gene-PKHYL_RS13335;Name=PKHYL_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13335;old_locus_tag=PKHYL_32560
NZ_AP019516.1	Protein Homology	CDS	2496096	2496377	.	-	0	ID=cds-WP_071003121.1;Parent=gene-PKHYL_RS13335;Dbxref=Genbank:WP_071003121.1;Name=WP_071003121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444135.1;locus_tag=PKHYL_RS13335;product=DUF503 domain-containing protein;protein_id=WP_071003121.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2496496	2497284	.	+	.	ID=gene-PKHYL_RS13340;Name=PKHYL_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13340;old_locus_tag=PKHYL_32570
NZ_AP019516.1	Protein Homology	CDS	2496496	2497284	.	+	0	ID=cds-WP_025645975.1;Parent=gene-PKHYL_RS13340;Dbxref=Genbank:WP_025645975.1;Name=WP_025645975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280953.1;locus_tag=PKHYL_RS13340;product=threonine/serine exporter family protein;protein_id=WP_025645975.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2497342	2497515	.	+	.	ID=gene-PKHYL_RS17750;Name=PKHYL_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17750
NZ_AP019516.1	Protein Homology	CDS	2497342	2497515	.	+	0	ID=cds-WP_269778319.1;Parent=gene-PKHYL_RS17750;Dbxref=Genbank:WP_269778319.1;Name=WP_269778319.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024230.2;locus_tag=PKHYL_RS17750;product=hypothetical protein;protein_id=WP_269778319.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2497544	2497732	.	+	.	ID=gene-PKHYL_RS17755;Name=PKHYL_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17755;old_locus_tag=PKHYL_32580
NZ_AP019516.1	Protein Homology	CDS	2497544	2497732	.	+	0	ID=cds-WP_269778179.1;Parent=gene-PKHYL_RS17755;Dbxref=Genbank:WP_269778179.1;Name=WP_269778179.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024230.2;locus_tag=PKHYL_RS17755;product=hypothetical protein;protein_id=WP_269778179.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2497910	2499266	.	+	.	ID=gene-PKHYL_RS13350;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=pseudogene;locus_tag=PKHYL_RS13350;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2497910	2499266	.	+	0	ID=cds-PKHYL_RS13350;Parent=gene-PKHYL_RS13350;Note=frameshifted;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005230226.1;locus_tag=PKHYL_RS13350;product=glutathione-disulfide reductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2499401	2499616	.	+	.	ID=gene-PKHYL_RS13355;Name=PKHYL_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13355
NZ_AP019516.1	Protein Homology	CDS	2499401	2499616	.	+	0	ID=cds-WP_071003117.1;Parent=gene-PKHYL_RS13355;Dbxref=Genbank:WP_071003117.1;Name=WP_071003117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201362.1;locus_tag=PKHYL_RS13355;product=hypothetical protein;protein_id=WP_071003117.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2499626	2500237	.	-	.	ID=gene-PKHYL_RS13360;Name=PKHYL_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13360;old_locus_tag=PKHYL_32620
NZ_AP019516.1	Protein Homology	CDS	2499626	2500237	.	-	0	ID=cds-WP_071003115.1;Parent=gene-PKHYL_RS13360;Dbxref=Genbank:WP_071003115.1;Name=WP_071003115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280957.1;locus_tag=PKHYL_RS13360;product=GNAT family N-acetyltransferase;protein_id=WP_071003115.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2500323	2501273	.	-	.	ID=gene-PKHYL_RS13365;Name=PKHYL_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13365;old_locus_tag=PKHYL_32630
NZ_AP019516.1	Protein Homology	CDS	2500323	2501273	.	-	0	ID=cds-WP_240365375.1;Parent=gene-PKHYL_RS13365;Dbxref=Genbank:WP_240365375.1;Name=WP_240365375.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF019604.2;locus_tag=PKHYL_RS13365;product=FAD-dependent oxidoreductase;protein_id=WP_240365375.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2501215	2501973	.	-	.	ID=gene-PKHYL_RS13370;Name=PKHYL_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13370;old_locus_tag=PKHYL_32640
NZ_AP019516.1	Protein Homology	CDS	2501215	2501973	.	-	0	ID=cds-WP_240365376.1;Parent=gene-PKHYL_RS13370;Dbxref=Genbank:WP_240365376.1;Name=WP_240365376.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF019604.2;locus_tag=PKHYL_RS13370;product=FAD-dependent oxidoreductase;protein_id=WP_240365376.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2502216	2503511	.	+	.	ID=gene-PKHYL_RS13375;Name=PKHYL_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13375;old_locus_tag=PKHYL_32650
NZ_AP019516.1	Protein Homology	CDS	2502216	2503511	.	+	0	ID=cds-WP_083328937.1;Parent=gene-PKHYL_RS13375;Dbxref=Genbank:WP_083328937.1;Name=WP_083328937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201371.1;locus_tag=PKHYL_RS13375;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_083328937.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2503540	2504955	.	-	.	ID=gene-PKHYL_RS13380;Name=PKHYL_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13380;old_locus_tag=PKHYL_32660
NZ_AP019516.1	Protein Homology	CDS	2503540	2504955	.	-	0	ID=cds-WP_240365377.1;Parent=gene-PKHYL_RS13380;Dbxref=Genbank:WP_240365377.1;Name=WP_240365377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514292.1;locus_tag=PKHYL_RS13380;product=GGDEF domain-containing protein;protein_id=WP_240365377.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2505293	2506174	.	-	.	ID=gene-PKHYL_RS13385;Name=PKHYL_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13385;old_locus_tag=PKHYL_32670
NZ_AP019516.1	Protein Homology	CDS	2505293	2506174	.	-	0	ID=cds-WP_071003111.1;Parent=gene-PKHYL_RS13385;Dbxref=Genbank:WP_071003111.1;Name=WP_071003111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444144.1;locus_tag=PKHYL_RS13385;product=PHP domain-containing protein;protein_id=WP_071003111.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2506480	2507031	.	+	.	ID=gene-PKHYL_RS13390;Name=ispZ;gbkey=Gene;gene=ispZ;gene_biotype=protein_coding;locus_tag=PKHYL_RS13390;old_locus_tag=PKHYL_32680
NZ_AP019516.1	Protein Homology	CDS	2506480	2507031	.	+	0	ID=cds-WP_071003109.1;Parent=gene-PKHYL_RS13390;Dbxref=Genbank:WP_071003109.1;Name=WP_071003109.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ispZ;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514294.1;locus_tag=PKHYL_RS13390;product=septation protein IspZ;protein_id=WP_071003109.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2507166	2507483	.	+	.	ID=gene-PKHYL_RS13395;Name=PKHYL_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13395;old_locus_tag=PKHYL_32690
NZ_AP019516.1	Protein Homology	CDS	2507166	2507483	.	+	0	ID=cds-WP_071003108.1;Parent=gene-PKHYL_RS13395;Dbxref=Genbank:WP_071003108.1;Name=WP_071003108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514295.1;locus_tag=PKHYL_RS13395;product=YciI family protein;protein_id=WP_071003108.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2507689	2507910	.	+	.	ID=gene-PKHYL_RS13400;Name=PKHYL_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13400;old_locus_tag=PKHYL_32700
NZ_AP019516.1	GeneMarkS-2+	CDS	2507689	2507910	.	+	0	ID=cds-WP_240365378.1;Parent=gene-PKHYL_RS13400;Dbxref=Genbank:WP_240365378.1;Name=WP_240365378.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13400;product=hypothetical protein;protein_id=WP_240365378.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2508040	2510113	.	+	.	ID=gene-PKHYL_RS13405;Name=mnmD;gbkey=Gene;gene=mnmD;gene_biotype=pseudogene;locus_tag=PKHYL_RS13405;old_locus_tag=PKHYL_32720;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2508040	2510113	.	+	0	ID=cds-PKHYL_RS13405;Parent=gene-PKHYL_RS13405;Note=frameshifted;Ontology_term=GO:0016645;gbkey=CDS;gene=mnmD;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors|0016645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201381.1;locus_tag=PKHYL_RS13405;product=tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2510220	2510654	.	+	.	ID=gene-PKHYL_RS13410;Name=PKHYL_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13410;old_locus_tag=PKHYL_32730
NZ_AP019516.1	Protein Homology	CDS	2510220	2510654	.	+	0	ID=cds-WP_071003102.1;Parent=gene-PKHYL_RS13410;Dbxref=Genbank:WP_071003102.1;Name=WP_071003102.1;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394184.1;locus_tag=PKHYL_RS13410;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_071003102.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2510788	2511357	.	+	.	ID=gene-PKHYL_RS13415;Name=PKHYL_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13415;old_locus_tag=PKHYL_32740
NZ_AP019516.1	Protein Homology	CDS	2510788	2511357	.	+	0	ID=cds-WP_197496675.1;Parent=gene-PKHYL_RS13415;Dbxref=Genbank:WP_197496675.1;Name=WP_197496675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444147.1;locus_tag=PKHYL_RS13415;product=hypothetical protein;protein_id=WP_197496675.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2511492	2512169	.	-	.	ID=gene-PKHYL_RS13420;Name=PKHYL_RS13420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13420;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2511492	2512169	.	-	0	ID=cds-PKHYL_RS13420;Parent=gene-PKHYL_RS13420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201386.1;locus_tag=PKHYL_RS13420;product=DUF4112 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2512162	2513079	.	-	.	ID=gene-PKHYL_RS13425;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=PKHYL_RS13425;old_locus_tag=PKHYL_32770
NZ_AP019516.1	Protein Homology	CDS	2512162	2513079	.	-	0	ID=cds-WP_071003097.1;Parent=gene-PKHYL_RS13425;Dbxref=Genbank:WP_071003097.1;Name=WP_071003097.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444149.1;locus_tag=PKHYL_RS13425;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_071003097.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2513275	2513430	.	-	.	ID=gene-PKHYL_RS13430;Name=PKHYL_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13430;old_locus_tag=PKHYL_32780
NZ_AP019516.1	GeneMarkS-2+	CDS	2513275	2513430	.	-	0	ID=cds-WP_227517146.1;Parent=gene-PKHYL_RS13430;Dbxref=Genbank:WP_227517146.1;Name=WP_227517146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13430;product=hypothetical protein;protein_id=WP_227517146.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2513548	2514446	.	-	.	ID=gene-PKHYL_RS13435;Name=PKHYL_RS13435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13435;old_locus_tag=PKHYL_32790;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2513548	2514446	.	-	0	ID=cds-PKHYL_RS13435;Parent=gene-PKHYL_RS13435;Note=frameshifted;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514302.1;locus_tag=PKHYL_RS13435;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2514514	2515355	.	-	.	ID=gene-PKHYL_RS13440;Name=PKHYL_RS13440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13440;old_locus_tag=PKHYL_32820;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2514514	2515355	.	-	0	ID=cds-PKHYL_RS13440;Parent=gene-PKHYL_RS13440;Note=frameshifted;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444152.1;locus_tag=PKHYL_RS13440;product=undecaprenyl-diphosphate phosphatase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2515441	2516142	.	-	.	ID=gene-PKHYL_RS13445;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=PKHYL_RS13445;old_locus_tag=PKHYL_32830
NZ_AP019516.1	Protein Homology	CDS	2515441	2516142	.	-	0	ID=cds-WP_240366539.1;Parent=gene-PKHYL_RS13445;Dbxref=Genbank:WP_240366539.1;Name=WP_240366539.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201394.1;locus_tag=PKHYL_RS13445;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_240366539.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2516411	2517950	.	-	.	ID=gene-PKHYL_RS13450;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=pseudogene;locus_tag=PKHYL_RS13450;old_locus_tag=PKHYL_32840;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2516411	2517950	.	-	0	ID=cds-PKHYL_RS13450;Parent=gene-PKHYL_RS13450;Note=frameshifted;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657561.1;locus_tag=PKHYL_RS13450;product=signal recognition particle protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2518364	2519155	.	+	.	ID=gene-PKHYL_RS13455;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=PKHYL_RS13455;old_locus_tag=PKHYL_32860
NZ_AP019516.1	Protein Homology	CDS	2518364	2519155	.	+	0	ID=cds-WP_201587478.1;Parent=gene-PKHYL_RS13455;Dbxref=Genbank:WP_201587478.1;Name=WP_201587478.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201396.1;locus_tag=PKHYL_RS13455;product=cytochrome c biogenesis protein CcsA;protein_id=WP_201587478.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2519232	2520161	.	-	.	ID=gene-PKHYL_RS13460;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=PKHYL_RS13460;old_locus_tag=PKHYL_32870
NZ_AP019516.1	Protein Homology	CDS	2519232	2520161	.	-	0	ID=cds-WP_240365379.1;Parent=gene-PKHYL_RS13460;Dbxref=Genbank:WP_240365379.1;Name=WP_240365379.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201397.1;locus_tag=PKHYL_RS13460;product=formyltetrahydrofolate deformylase;protein_id=WP_240365379.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2520361	2523045	.	-	.	ID=gene-PKHYL_RS13465;Name=PKHYL_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13465;old_locus_tag=PKHYL_32880
NZ_AP019516.1	Protein Homology	CDS	2520361	2523045	.	-	0	ID=cds-WP_240365380.1;Parent=gene-PKHYL_RS13465;Dbxref=Genbank:WP_240365380.1;Name=WP_240365380.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014428.2;locus_tag=PKHYL_RS13465;product=Ig-like domain-containing protein;protein_id=WP_240365380.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2523102	2523389	.	-	.	ID=gene-PKHYL_RS13470;Name=PKHYL_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13470;old_locus_tag=PKHYL_32890
NZ_AP019516.1	GeneMarkS-2+	CDS	2523102	2523389	.	-	0	ID=cds-WP_240365381.1;Parent=gene-PKHYL_RS13470;Dbxref=Genbank:WP_240365381.1;Name=WP_240365381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13470;product=hypothetical protein;protein_id=WP_240365381.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2523386	2524483	.	-	.	ID=gene-PKHYL_RS13475;Name=PKHYL_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13475;old_locus_tag=PKHYL_32900
NZ_AP019516.1	GeneMarkS-2+	CDS	2523386	2524483	.	-	0	ID=cds-WP_240365382.1;Parent=gene-PKHYL_RS13475;Dbxref=Genbank:WP_240365382.1;Name=WP_240365382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13475;product=hypothetical protein;protein_id=WP_240365382.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2524503	2525027	.	-	.	ID=gene-PKHYL_RS13480;Name=PKHYL_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13480;old_locus_tag=PKHYL_32910
NZ_AP019516.1	GeneMarkS-2+	CDS	2524503	2525027	.	-	0	ID=cds-WP_240365383.1;Parent=gene-PKHYL_RS13480;Dbxref=Genbank:WP_240365383.1;Name=WP_240365383.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13480;product=hypothetical protein;protein_id=WP_240365383.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2525038	2526057	.	-	.	ID=gene-PKHYL_RS13485;Name=PKHYL_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13485;old_locus_tag=PKHYL_32920
NZ_AP019516.1	GeneMarkS-2+	CDS	2525038	2526057	.	-	0	ID=cds-WP_240365384.1;Parent=gene-PKHYL_RS13485;Dbxref=Genbank:WP_240365384.1;Name=WP_240365384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13485;product=hypothetical protein;protein_id=WP_240365384.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2526543	2526779	.	+	.	ID=gene-PKHYL_RS13490;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=PKHYL_RS13490;old_locus_tag=PKHYL_32930
NZ_AP019516.1	Protein Homology	CDS	2526543	2526779	.	+	0	ID=cds-WP_057761372.1;Parent=gene-PKHYL_RS13490;Dbxref=Genbank:WP_057761372.1;Name=WP_057761372.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997628.1;locus_tag=PKHYL_RS13490;product=50S ribosomal protein L28;protein_id=WP_057761372.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2526907	2527062	.	+	.	ID=gene-PKHYL_RS13495;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=PKHYL_RS13495;old_locus_tag=PKHYL_32940
NZ_AP019516.1	Protein Homology	CDS	2526907	2527062	.	+	0	ID=cds-WP_010201403.1;Parent=gene-PKHYL_RS13495;Dbxref=Genbank:WP_010201403.1;Name=WP_010201403.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997627.1;locus_tag=PKHYL_RS13495;product=50S ribosomal protein L33;protein_id=WP_010201403.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2527170	2527481	.	-	.	ID=gene-PKHYL_RS13500;Name=PKHYL_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13500;old_locus_tag=PKHYL_32950
NZ_AP019516.1	Protein Homology	CDS	2527170	2527481	.	-	0	ID=cds-WP_071003085.1;Parent=gene-PKHYL_RS13500;Dbxref=Genbank:WP_071003085.1;Name=WP_071003085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514309.1;locus_tag=PKHYL_RS13500;product=hypothetical protein;protein_id=WP_071003085.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2527700	2528011	.	-	.	ID=gene-PKHYL_RS13505;Name=PKHYL_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13505;old_locus_tag=PKHYL_32960
NZ_AP019516.1	Protein Homology	CDS	2527700	2528011	.	-	0	ID=cds-WP_058024609.1;Parent=gene-PKHYL_RS13505;Dbxref=Genbank:WP_058024609.1;Name=WP_058024609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444158.1;locus_tag=PKHYL_RS13505;product=hypothetical protein;protein_id=WP_058024609.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2528118	2528447	.	-	.	ID=gene-PKHYL_RS13510;Name=PKHYL_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13510;old_locus_tag=PKHYL_32970
NZ_AP019516.1	Protein Homology	CDS	2528118	2528447	.	-	0	ID=cds-WP_071003769.1;Parent=gene-PKHYL_RS13510;Dbxref=Genbank:WP_071003769.1;Name=WP_071003769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394064.1;locus_tag=PKHYL_RS13510;product=hypothetical protein;protein_id=WP_071003769.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2528605	2529294	.	-	.	ID=gene-PKHYL_RS13515;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=PKHYL_RS13515;old_locus_tag=PKHYL_32980
NZ_AP019516.1	Protein Homology	CDS	2528605	2529294	.	-	0	ID=cds-WP_240365385.1;Parent=gene-PKHYL_RS13515;Dbxref=Genbank:WP_240365385.1;Name=WP_240365385.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005262570.1;locus_tag=PKHYL_RS13515;product=ribulose-phosphate 3-epimerase;protein_id=WP_240365385.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2529408	2529800	.	-	.	ID=gene-PKHYL_RS13520;Name=PKHYL_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13520;old_locus_tag=PKHYL_32990
NZ_AP019516.1	Protein Homology	CDS	2529408	2529800	.	-	0	ID=cds-WP_240365386.1;Parent=gene-PKHYL_RS13520;Dbxref=Genbank:WP_240365386.1;Name=WP_240365386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394066.1;locus_tag=PKHYL_RS13520;product=TIGR03643 family protein;protein_id=WP_240365386.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2529917	2530807	.	-	.	ID=gene-PKHYL_RS13525;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=PKHYL_RS13525;old_locus_tag=PKHYL_33000
NZ_AP019516.1	Protein Homology	CDS	2529917	2530807	.	-	0	ID=cds-WP_071003079.1;Parent=gene-PKHYL_RS13525;Dbxref=Genbank:WP_071003079.1;Name=WP_071003079.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514314.1;locus_tag=PKHYL_RS13525;product=S-formylglutathione hydrolase;protein_id=WP_071003079.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2530906	2531181	.	-	.	ID=gene-PKHYL_RS13530;Name=PKHYL_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13530;old_locus_tag=PKHYL_33010
NZ_AP019516.1	GeneMarkS-2+	CDS	2530906	2531181	.	-	0	ID=cds-WP_240365387.1;Parent=gene-PKHYL_RS13530;Dbxref=Genbank:WP_240365387.1;Name=WP_240365387.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13530;product=hypothetical protein;protein_id=WP_240365387.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2531178	2531489	.	-	.	ID=gene-PKHYL_RS13535;Name=PKHYL_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13535;old_locus_tag=PKHYL_33020
NZ_AP019516.1	Protein Homology	CDS	2531178	2531489	.	-	0	ID=cds-WP_240365388.1;Parent=gene-PKHYL_RS13535;Dbxref=Genbank:WP_240365388.1;Name=WP_240365388.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013788.2;locus_tag=PKHYL_RS13535;product=C13 family peptidase;protein_id=WP_240365388.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2531486	2532385	.	-	.	ID=gene-PKHYL_RS13540;Name=PKHYL_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13540;old_locus_tag=PKHYL_33030
NZ_AP019516.1	GeneMarkS-2+	CDS	2531486	2532385	.	-	0	ID=cds-WP_240365389.1;Parent=gene-PKHYL_RS13540;Dbxref=Genbank:WP_240365389.1;Name=WP_240365389.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13540;product=hypothetical protein;protein_id=WP_240365389.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2532703	2534664	.	-	.	ID=gene-PKHYL_RS13545;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=PKHYL_RS13545;old_locus_tag=PKHYL_33040
NZ_AP019516.1	Protein Homology	CDS	2532703	2534664	.	-	0	ID=cds-WP_071003076.1;Parent=gene-PKHYL_RS13545;Dbxref=Genbank:WP_071003076.1;Name=WP_071003076.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201427.1;locus_tag=PKHYL_RS13545;product=molecular chaperone HtpG;protein_id=WP_071003076.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2535127	2535942	.	-	.	ID=gene-PKHYL_RS13550;Name=PKHYL_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13550;old_locus_tag=PKHYL_33050
NZ_AP019516.1	Protein Homology	CDS	2535127	2535942	.	-	0	ID=cds-WP_071003074.1;Parent=gene-PKHYL_RS13550;Dbxref=Genbank:WP_071003074.1;Name=WP_071003074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280981.1;locus_tag=PKHYL_RS13550;product=thioesterase family protein;protein_id=WP_071003074.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2536007	2536255	.	-	.	ID=gene-PKHYL_RS13555;Name=PKHYL_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13555;old_locus_tag=PKHYL_33060
NZ_AP019516.1	Protein Homology	CDS	2536007	2536255	.	-	0	ID=cds-WP_058024603.1;Parent=gene-PKHYL_RS13555;Dbxref=Genbank:WP_058024603.1;Name=WP_058024603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201432.1;locus_tag=PKHYL_RS13555;product=hypothetical protein;protein_id=WP_058024603.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2536309	2537264	.	-	.	ID=gene-PKHYL_RS13560;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=pseudogene;gene_synonym=lytB;locus_tag=PKHYL_RS13560;old_locus_tag=PKHYL_33070;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2536309	2537264	.	-	0	ID=cds-PKHYL_RS13560;Parent=gene-PKHYL_RS13560;Note=frameshifted;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201433.1;locus_tag=PKHYL_RS13560;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2537616	2538243	.	+	.	ID=gene-PKHYL_RS13565;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=pseudogene;locus_tag=PKHYL_RS13565;old_locus_tag=PKHYL_33080;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2537616	2538243	.	+	0	ID=cds-PKHYL_RS13565;Parent=gene-PKHYL_RS13565;Note=frameshifted;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514321.1;locus_tag=PKHYL_RS13565;product=guanylate kinase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2538420	2538680	.	+	.	ID=gene-PKHYL_RS13570;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=PKHYL_RS13570;old_locus_tag=PKHYL_33090
NZ_AP019516.1	Protein Homology	CDS	2538420	2538680	.	+	0	ID=cds-WP_071003070.1;Parent=gene-PKHYL_RS13570;Dbxref=Genbank:WP_071003070.1;Name=WP_071003070.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201435.1;locus_tag=PKHYL_RS13570;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_071003070.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2539031	2539228	.	+	.	ID=gene-PKHYL_RS13575;Name=PKHYL_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13575;old_locus_tag=PKHYL_33100
NZ_AP019516.1	GeneMarkS-2+	CDS	2539031	2539228	.	+	0	ID=cds-WP_240365390.1;Parent=gene-PKHYL_RS13575;Dbxref=Genbank:WP_240365390.1;Name=WP_240365390.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13575;product=hypothetical protein;protein_id=WP_240365390.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2539221	2539397	.	+	.	ID=gene-PKHYL_RS17760;Name=PKHYL_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17760;old_locus_tag=PKHYL_33110
NZ_AP019516.1	Protein Homology	CDS	2539221	2539397	.	+	0	ID=cds-WP_269778180.1;Parent=gene-PKHYL_RS17760;Dbxref=Genbank:WP_269778180.1;Name=WP_269778180.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024724.2;locus_tag=PKHYL_RS17760;product=HD domain-containing protein;protein_id=WP_269778180.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2539429	2540592	.	+	.	ID=gene-PKHYL_RS17765;Name=PKHYL_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17765;old_locus_tag=PKHYL_33120
NZ_AP019516.1	Protein Homology	CDS	2539429	2540592	.	+	0	ID=cds-WP_269778320.1;Parent=gene-PKHYL_RS17765;Dbxref=Genbank:WP_269778320.1;Name=WP_269778320.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024724.2;locus_tag=PKHYL_RS17765;product=HD domain-containing protein;protein_id=WP_269778320.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2540692	2541207	.	+	.	ID=gene-PKHYL_RS13590;Name=PKHYL_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13590;old_locus_tag=PKHYL_33130
NZ_AP019516.1	GeneMarkS-2+	CDS	2540692	2541207	.	+	0	ID=cds-WP_240365391.1;Parent=gene-PKHYL_RS13590;Dbxref=Genbank:WP_240365391.1;Name=WP_240365391.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13590;product=hypothetical protein;protein_id=WP_240365391.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2541377	2541757	.	+	.	ID=gene-PKHYL_RS13595;Name=PKHYL_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13595;old_locus_tag=PKHYL_33140
NZ_AP019516.1	Protein Homology	CDS	2541377	2541757	.	+	0	ID=cds-WP_058024599.1;Parent=gene-PKHYL_RS13595;Dbxref=Genbank:WP_058024599.1;Name=WP_058024599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016782709.1;locus_tag=PKHYL_RS13595;product=RidA family protein;protein_id=WP_058024599.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2541893	2544183	.	+	.	ID=gene-PKHYL_RS13600;Name=PKHYL_RS13600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13600;old_locus_tag=PKHYL_33160;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2541893	2544183	.	+	0	ID=cds-PKHYL_RS13600;Parent=gene-PKHYL_RS13600;Note=frameshifted;Ontology_term=GO:0006260,GO:0032508,GO:0003678;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201438.1;locus_tag=PKHYL_RS13600;product=primosomal protein N';pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2544401	2545517	.	+	.	ID=gene-PKHYL_RS13605;Name=PKHYL_RS13605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13605;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2544401	2545517	.	+	0	ID=cds-PKHYL_RS13605;Parent=gene-PKHYL_RS13605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444171.1;locus_tag=PKHYL_RS13605;product=cation diffusion facilitator family transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2545555	2545809	.	-	.	ID=gene-PKHYL_RS13610;Name=PKHYL_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13610
NZ_AP019516.1	GeneMarkS-2+	CDS	2545555	2545809	.	-	0	ID=cds-WP_240365392.1;Parent=gene-PKHYL_RS13610;Dbxref=Genbank:WP_240365392.1;Name=WP_240365392.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13610;product=hypothetical protein;protein_id=WP_240365392.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2546093	2546368	.	+	.	ID=gene-PKHYL_RS13615;Name=PKHYL_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13615;old_locus_tag=PKHYL_33190
NZ_AP019516.1	GeneMarkS-2+	CDS	2546093	2546368	.	+	0	ID=cds-WP_240365393.1;Parent=gene-PKHYL_RS13615;Dbxref=Genbank:WP_240365393.1;Name=WP_240365393.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13615;product=hypothetical protein;protein_id=WP_240365393.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2546358	2546630	.	+	.	ID=gene-PKHYL_RS13620;Name=PKHYL_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13620;old_locus_tag=PKHYL_33200
NZ_AP019516.1	GeneMarkS-2+	CDS	2546358	2546630	.	+	0	ID=cds-WP_240365394.1;Parent=gene-PKHYL_RS13620;Dbxref=Genbank:WP_240365394.1;Name=WP_240365394.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13620;product=hypothetical protein;protein_id=WP_240365394.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2546632	2546799	.	+	.	ID=gene-PKHYL_RS13625;Name=PKHYL_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13625;old_locus_tag=PKHYL_33210
NZ_AP019516.1	GeneMarkS-2+	CDS	2546632	2546799	.	+	0	ID=cds-WP_240365395.1;Parent=gene-PKHYL_RS13625;Dbxref=Genbank:WP_240365395.1;Name=WP_240365395.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13625;product=hypothetical protein;protein_id=WP_240365395.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2546965	2548047	.	+	.	ID=gene-PKHYL_RS13630;Name=PKHYL_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13630;old_locus_tag=PKHYL_33220
NZ_AP019516.1	Protein Homology	CDS	2546965	2548047	.	+	0	ID=cds-WP_240365396.1;Parent=gene-PKHYL_RS13630;Dbxref=Genbank:WP_240365396.1;Name=WP_240365396.1;Ontology_term=GO:0006812,GO:1902600,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: protein motif:HMM:NF013188.2;locus_tag=PKHYL_RS13630;product=monovalent cation:proton antiporter-2 (CPA2) family protein;protein_id=WP_240365396.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2548170	2548544	.	+	.	ID=gene-PKHYL_RS13635;Name=PKHYL_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13635;old_locus_tag=PKHYL_33230
NZ_AP019516.1	Protein Homology	CDS	2548170	2548544	.	+	0	ID=cds-WP_240365397.1;Parent=gene-PKHYL_RS13635;Dbxref=Genbank:WP_240365397.1;Name=WP_240365397.1;Ontology_term=GO:0006813;gbkey=CDS;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: protein motif:HMM:NF014325.2;locus_tag=PKHYL_RS13635;product=NAD-binding protein;protein_id=WP_240365397.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2548613	2548777	.	+	.	ID=gene-PKHYL_RS13640;Name=PKHYL_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13640;old_locus_tag=PKHYL_33240
NZ_AP019516.1	GeneMarkS-2+	CDS	2548613	2548777	.	+	0	ID=cds-WP_240365398.1;Parent=gene-PKHYL_RS13640;Dbxref=Genbank:WP_240365398.1;Name=WP_240365398.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13640;product=hypothetical protein;protein_id=WP_240365398.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2548801	2549730	.	-	.	ID=gene-PKHYL_RS13645;Name=PKHYL_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13645;old_locus_tag=PKHYL_33250
NZ_AP019516.1	Protein Homology	CDS	2548801	2549730	.	-	0	ID=cds-WP_240365399.1;Parent=gene-PKHYL_RS13645;Dbxref=Genbank:WP_240365399.1;Name=WP_240365399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444175.1;locus_tag=PKHYL_RS13645;product=DUF2628 domain-containing protein;protein_id=WP_240365399.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2549924	2550762	.	+	.	ID=gene-PKHYL_RS13650;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=pseudogene;locus_tag=PKHYL_RS13650;old_locus_tag=PKHYL_33260;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2549924	2550762	.	+	0	ID=cds-PKHYL_RS13650;Parent=gene-PKHYL_RS13650;Note=frameshifted;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011280992.1;locus_tag=PKHYL_RS13650;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2551798	2552849	.	+	.	ID=gene-PKHYL_RS13655;Name=recA;gbkey=Gene;gene=recA;gene_biotype=pseudogene;locus_tag=PKHYL_RS13655;old_locus_tag=PKHYL_33280;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2551798	2552849	.	+	0	ID=cds-PKHYL_RS13655;Parent=gene-PKHYL_RS13655;Note=frameshifted;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201447.1;locus_tag=PKHYL_RS13655;product=recombinase RecA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2553241	2553891	.	+	.	ID=gene-PKHYL_RS13660;Name=PKHYL_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13660;old_locus_tag=PKHYL_33290
NZ_AP019516.1	Protein Homology	CDS	2553241	2553891	.	+	0	ID=cds-WP_240365400.1;Parent=gene-PKHYL_RS13660;Dbxref=Genbank:WP_240365400.1;Name=WP_240365400.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014668.2;locus_tag=PKHYL_RS13660;product=regulatory protein RecX;protein_id=WP_240365400.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2553857	2553985	.	+	.	ID=gene-PKHYL_RS17770;Name=PKHYL_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17770
NZ_AP019516.1	Protein Homology	CDS	2553857	2553985	.	+	0	ID=cds-WP_269778181.1;Parent=gene-PKHYL_RS17770;Dbxref=Genbank:WP_269778181.1;Name=WP_269778181.1;Ontology_term=GO:0006282;gbkey=CDS;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: protein motif:HMM:NF014668.2;locus_tag=PKHYL_RS17770;product=RecX family transcriptional regulator;protein_id=WP_269778181.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2554112	2554825	.	-	.	ID=gene-PKHYL_RS13665;Name=PKHYL_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13665;old_locus_tag=PKHYL_33300
NZ_AP019516.1	Protein Homology	CDS	2554112	2554825	.	-	0	ID=cds-WP_240365401.1;Parent=gene-PKHYL_RS13665;Dbxref=Genbank:WP_240365401.1;Name=WP_240365401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444178.1;locus_tag=PKHYL_RS13665;product=YidB family protein;protein_id=WP_240365401.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2555080	2555529	.	-	.	ID=gene-PKHYL_RS13670;Name=PKHYL_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13670;old_locus_tag=PKHYL_33310
NZ_AP019516.1	Protein Homology	CDS	2555080	2555529	.	-	0	ID=cds-WP_093071180.1;Parent=gene-PKHYL_RS13670;Dbxref=Genbank:WP_093071180.1;Name=WP_093071180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201452.1;locus_tag=PKHYL_RS13670;product=hypothetical protein;protein_id=WP_093071180.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2555582	2555863	.	-	.	ID=gene-PKHYL_RS13675;Name=PKHYL_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13675;old_locus_tag=PKHYL_33320
NZ_AP019516.1	Protein Homology	CDS	2555582	2555863	.	-	0	ID=cds-WP_058024586.1;Parent=gene-PKHYL_RS13675;Dbxref=Genbank:WP_058024586.1;Name=WP_058024586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201454.1;locus_tag=PKHYL_RS13675;product=succinate dehydrogenase assembly factor 2;protein_id=WP_058024586.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2555958	2556881	.	-	.	ID=gene-PKHYL_RS13680;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=PKHYL_RS13680;old_locus_tag=PKHYL_33330
NZ_AP019516.1	Protein Homology	CDS	2555958	2556881	.	-	0	ID=cds-WP_093071183.1;Parent=gene-PKHYL_RS13680;Dbxref=Genbank:WP_093071183.1;Name=WP_093071183.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201455.1;locus_tag=PKHYL_RS13680;product=dihydropteroate synthase;protein_id=WP_093071183.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2557123	2558939	.	-	.	ID=gene-PKHYL_RS13685;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=pseudogene;locus_tag=PKHYL_RS13685;partial=true;pseudo=true;start_range=.,2557123
NZ_AP019516.1	Protein Homology	CDS	2557123	2558939	.	-	0	ID=cds-PKHYL_RS13685;Parent=gene-PKHYL_RS13685;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004823226.1;locus_tag=PKHYL_RS13685;partial=true;product=ATP-dependent zinc metalloprotease FtsH;pseudo=true;start_range=.,2557123;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2559340	2559971	.	-	.	ID=gene-PKHYL_RS13690;Name=PKHYL_RS13690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13690;old_locus_tag=PKHYL_33360;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2559340	2559971	.	-	0	ID=cds-PKHYL_RS13690;Parent=gene-PKHYL_RS13690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003659062.1;locus_tag=PKHYL_RS13690;product=23S rRNA methyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2560304	2560615	.	+	.	ID=gene-PKHYL_RS13695;Name=PKHYL_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13695;old_locus_tag=PKHYL_33370
NZ_AP019516.1	Protein Homology	CDS	2560304	2560615	.	+	0	ID=cds-WP_058024582.1;Parent=gene-PKHYL_RS13695;Dbxref=Genbank:WP_058024582.1;Name=WP_058024582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201459.1;locus_tag=PKHYL_RS13695;product=YhbY family RNA-binding protein;protein_id=WP_058024582.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2560940	2561599	.	+	.	ID=gene-PKHYL_RS13700;Name=PKHYL_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13700;old_locus_tag=PKHYL_33380
NZ_AP019516.1	GeneMarkS-2+	CDS	2560940	2561599	.	+	0	ID=cds-WP_240365402.1;Parent=gene-PKHYL_RS13700;Dbxref=Genbank:WP_240365402.1;Name=WP_240365402.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13700;product=hypothetical protein;protein_id=WP_240365402.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2561735	2562462	.	-	.	ID=gene-PKHYL_RS13705;Name=PKHYL_RS13705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13705;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2561735	2562462	.	-	0	ID=cds-PKHYL_RS13705;Parent=gene-PKHYL_RS13705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514341.1;locus_tag=PKHYL_RS13705;product=CHAP domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2562916	2563209	.	+	.	ID=gene-PKHYL_RS13710;Name=PKHYL_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13710;old_locus_tag=PKHYL_33400
NZ_AP019516.1	GeneMarkS-2+	CDS	2562916	2563209	.	+	0	ID=cds-WP_240365403.1;Parent=gene-PKHYL_RS13710;Dbxref=Genbank:WP_240365403.1;Name=WP_240365403.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13710;product=hypothetical protein;protein_id=WP_240365403.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2563463	2564380	.	-	.	ID=gene-PKHYL_RS13715;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=PKHYL_RS13715;old_locus_tag=PKHYL_33410
NZ_AP019516.1	Protein Homology	CDS	2563463	2564380	.	-	0	ID=cds-WP_071003046.1;Parent=gene-PKHYL_RS13715;Dbxref=Genbank:WP_071003046.1;Name=WP_071003046.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444187.1;locus_tag=PKHYL_RS13715;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_071003046.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2564696	2565901	.	-	.	ID=gene-PKHYL_RS13720;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=PKHYL_RS13720;old_locus_tag=PKHYL_33420
NZ_AP019516.1	Protein Homology	CDS	2564696	2565901	.	-	0	ID=cds-WP_240366541.1;Parent=gene-PKHYL_RS13720;Dbxref=Genbank:WP_240366541.1;Name=WP_240366541.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514344.1;locus_tag=PKHYL_RS13720;product=cell division protein FtsZ;protein_id=WP_240366541.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2566144	2566677	.	-	.	ID=gene-PKHYL_RS13725;Name=PKHYL_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13725;old_locus_tag=PKHYL_33430
NZ_AP019516.1	GeneMarkS-2+	CDS	2566144	2566677	.	-	0	ID=cds-WP_240365404.1;Parent=gene-PKHYL_RS13725;Dbxref=Genbank:WP_240365404.1;Name=WP_240365404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13725;product=hypothetical protein;protein_id=WP_240365404.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2566637	2567509	.	-	.	ID=gene-PKHYL_RS13730;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=PKHYL_RS13730;old_locus_tag=PKHYL_33440
NZ_AP019516.1	Protein Homology	CDS	2566637	2567509	.	-	0	ID=cds-WP_240365405.1;Parent=gene-PKHYL_RS13730;Dbxref=Genbank:WP_240365405.1;Name=WP_240365405.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: protein motif:HMM:TIGR01174.1;locus_tag=PKHYL_RS13730;product=cell division protein FtsA;protein_id=WP_240365405.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2567622	2568095	.	-	.	ID=gene-PKHYL_RS13735;Name=PKHYL_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13735;old_locus_tag=PKHYL_33450
NZ_AP019516.1	Protein Homology	CDS	2567622	2568095	.	-	0	ID=cds-WP_240365406.1;Parent=gene-PKHYL_RS13735;Dbxref=Genbank:WP_240365406.1;Name=WP_240365406.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015739.2;locus_tag=PKHYL_RS13735;product=cell division protein FtsQ/DivIB;protein_id=WP_240365406.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2568145	2568414	.	-	.	ID=gene-PKHYL_RS13740;Name=PKHYL_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13740;old_locus_tag=PKHYL_33460
NZ_AP019516.1	GeneMarkS-2+	CDS	2568145	2568414	.	-	0	ID=cds-WP_240365407.1;Parent=gene-PKHYL_RS13740;Dbxref=Genbank:WP_240365407.1;Name=WP_240365407.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13740;product=hypothetical protein;protein_id=WP_240365407.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2568927	2569865	.	-	.	ID=gene-PKHYL_RS13745;Name=PKHYL_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13745;old_locus_tag=PKHYL_33470
NZ_AP019516.1	Protein Homology	CDS	2568927	2569865	.	-	0	ID=cds-WP_240366542.1;Parent=gene-PKHYL_RS13745;Dbxref=Genbank:WP_240366542.1;Name=WP_240366542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394144.1;locus_tag=PKHYL_RS13745;product=D-alanine--D-alanine ligase;protein_id=WP_240366542.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2569805	2570026	.	-	.	ID=gene-PKHYL_RS13750;Name=PKHYL_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13750;old_locus_tag=PKHYL_33480
NZ_AP019516.1	GeneMarkS-2+	CDS	2569805	2570026	.	-	0	ID=cds-WP_240365408.1;Parent=gene-PKHYL_RS13750;Dbxref=Genbank:WP_240365408.1;Name=WP_240365408.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13750;product=hypothetical protein;protein_id=WP_240365408.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2570050	2571458	.	-	.	ID=gene-PKHYL_RS13755;Name=murC;gbkey=Gene;gene=murC;gene_biotype=pseudogene;locus_tag=PKHYL_RS13755;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2570050	2571458	.	-	0	ID=cds-PKHYL_RS13755;Parent=gene-PKHYL_RS13755;Note=frameshifted;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514348.1;locus_tag=PKHYL_RS13755;product=UDP-N-acetylmuramate--L-alanine ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2571545	2572630	.	-	.	ID=gene-PKHYL_RS13760;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=PKHYL_RS13760;old_locus_tag=PKHYL_33530
NZ_AP019516.1	Protein Homology	CDS	2571545	2572630	.	-	0	ID=cds-WP_240365409.1;Parent=gene-PKHYL_RS13760;Dbxref=Genbank:WP_240365409.1;Name=WP_240365409.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444192.1;locus_tag=PKHYL_RS13760;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_240365409.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2572907	2573878	.	-	.	ID=gene-PKHYL_RS13765;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=PKHYL_RS13765;old_locus_tag=PKHYL_33540
NZ_AP019516.1	Protein Homology	CDS	2572907	2573878	.	-	0	ID=cds-WP_071003766.1;Parent=gene-PKHYL_RS13765;Dbxref=Genbank:WP_071003766.1;Name=WP_071003766.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444193.1;locus_tag=PKHYL_RS13765;product=glutathione synthase;protein_id=WP_071003766.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2573943	2574660	.	-	.	ID=gene-PKHYL_RS13770;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=pseudogene;locus_tag=PKHYL_RS13770;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2573943	2574660	.	-	0	ID=cds-PKHYL_RS13770;Parent=gene-PKHYL_RS13770;Note=frameshifted;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201484.1;locus_tag=PKHYL_RS13770;product=orotate phosphoribosyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2574722	2575720	.	-	.	ID=gene-PKHYL_RS13775;Name=PKHYL_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13775;old_locus_tag=PKHYL_33570
NZ_AP019516.1	Protein Homology	CDS	2574722	2575720	.	-	0	ID=cds-WP_071003041.1;Parent=gene-PKHYL_RS13775;Dbxref=Genbank:WP_071003041.1;Name=WP_071003041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514352.1;locus_tag=PKHYL_RS13775;product=hypothetical protein;protein_id=WP_071003041.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2575794	2576633	.	-	.	ID=gene-PKHYL_RS13780;Name=PKHYL_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13780;old_locus_tag=PKHYL_33580
NZ_AP019516.1	Protein Homology	CDS	2575794	2576633	.	-	0	ID=cds-WP_071003040.1;Parent=gene-PKHYL_RS13780;Dbxref=Genbank:WP_071003040.1;Name=WP_071003040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201487.1;locus_tag=PKHYL_RS13780;product=SDR family oxidoreductase;protein_id=WP_071003040.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2576694	2577215	.	-	.	ID=gene-PKHYL_RS13785;Name=PKHYL_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13785;old_locus_tag=PKHYL_33590
NZ_AP019516.1	GeneMarkS-2+	CDS	2576694	2577215	.	-	0	ID=cds-WP_240366573.1;Parent=gene-PKHYL_RS13785;Dbxref=Genbank:WP_240366573.1;Name=WP_240366573.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13785;product=hypothetical protein;protein_id=WP_240366573.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2577151	2577960	.	-	.	ID=gene-PKHYL_RS13790;Name=PKHYL_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13790;old_locus_tag=PKHYL_33600
NZ_AP019516.1	Protein Homology	CDS	2577151	2577960	.	-	0	ID=cds-WP_269778182.1;Parent=gene-PKHYL_RS13790;Dbxref=Genbank:WP_269778182.1;Name=WP_269778182.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024779.2;locus_tag=PKHYL_RS13790;product=DUF4105 domain-containing protein;protein_id=WP_269778182.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2578011	2578580	.	-	.	ID=gene-PKHYL_RS17775;Name=PKHYL_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17775;old_locus_tag=PKHYL_33610
NZ_AP019516.1	Protein Homology	CDS	2578011	2578580	.	-	0	ID=cds-WP_269778183.1;Parent=gene-PKHYL_RS17775;Dbxref=Genbank:WP_269778183.1;Name=WP_269778183.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024779.2;locus_tag=PKHYL_RS17775;product=DUF4105 domain-containing protein;protein_id=WP_269778183.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2578646	2578801	.	+	.	ID=gene-PKHYL_RS13795;Name=PKHYL_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13795;old_locus_tag=PKHYL_33620
NZ_AP019516.1	GeneMarkS-2+	CDS	2578646	2578801	.	+	0	ID=cds-WP_240365410.1;Parent=gene-PKHYL_RS13795;Dbxref=Genbank:WP_240365410.1;Name=WP_240365410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13795;product=hypothetical protein;protein_id=WP_240365410.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2579011	2579634	.	+	.	ID=gene-PKHYL_RS13800;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=PKHYL_RS13800;old_locus_tag=PKHYL_33630
NZ_AP019516.1	Protein Homology	CDS	2579011	2579634	.	+	0	ID=cds-WP_093069401.1;Parent=gene-PKHYL_RS13800;Dbxref=Genbank:WP_093069401.1;Name=WP_093069401.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959794.1;locus_tag=PKHYL_RS13800;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_093069401.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2579759	2581308	.	+	.	ID=gene-PKHYL_RS13805;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=pseudogene;locus_tag=PKHYL_RS13805;old_locus_tag=PKHYL_33640;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2579759	2581308	.	+	0	ID=cds-PKHYL_RS13805;Parent=gene-PKHYL_RS13805;Note=frameshifted;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003673659.1;locus_tag=PKHYL_RS13805;product=murein biosynthesis integral membrane protein MurJ;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2581438	2581737	.	+	.	ID=gene-PKHYL_RS13810;Name=PKHYL_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13810
NZ_AP019516.1	GeneMarkS-2+	CDS	2581438	2581737	.	+	0	ID=cds-WP_240365411.1;Parent=gene-PKHYL_RS13810;Dbxref=Genbank:WP_240365411.1;Name=WP_240365411.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13810;product=hypothetical protein;protein_id=WP_240365411.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2581737	2582051	.	+	.	ID=gene-PKHYL_RS13815;Name=PKHYL_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13815;old_locus_tag=PKHYL_33650
NZ_AP019516.1	GeneMarkS-2+	CDS	2581737	2582051	.	+	0	ID=cds-WP_240365412.1;Parent=gene-PKHYL_RS13815;Dbxref=Genbank:WP_240365412.1;Name=WP_240365412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13815;product=DUF4878 domain-containing protein;protein_id=WP_240365412.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2582063	2582674	.	-	.	ID=gene-PKHYL_RS13820;Name=PKHYL_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13820;old_locus_tag=PKHYL_33660
NZ_AP019516.1	Protein Homology	CDS	2582063	2582674	.	-	0	ID=cds-WP_071003037.1;Parent=gene-PKHYL_RS13820;Dbxref=Genbank:WP_071003037.1;Name=WP_071003037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201493.1;locus_tag=PKHYL_RS13820;product=GNAT family N-acetyltransferase;protein_id=WP_071003037.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2582920	2583987	.	+	.	ID=gene-PKHYL_RS13825;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=PKHYL_RS13825;old_locus_tag=PKHYL_33670
NZ_AP019516.1	Protein Homology	CDS	2582920	2583987	.	+	0	ID=cds-WP_093069396.1;Parent=gene-PKHYL_RS13825;Dbxref=Genbank:WP_093069396.1;Name=WP_093069396.1;Ontology_term=GO:0006747,GO:0009398,GO:0003919,GO:0005737;gbkey=CDS;gene=ribF;go_component=cytoplasm|0005737||IEA;go_function=FMN adenylyltransferase activity|0003919||IEA;go_process=FAD biosynthetic process|0006747||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672920.1;locus_tag=PKHYL_RS13825;product=riboflavin biosynthesis protein RibF;protein_id=WP_093069396.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2584173	2584412	.	-	.	ID=gene-PKHYL_RS13830;Name=PKHYL_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13830;old_locus_tag=PKHYL_33680
NZ_AP019516.1	Protein Homology	CDS	2584173	2584412	.	-	0	ID=cds-WP_093069393.1;Parent=gene-PKHYL_RS13830;Dbxref=Genbank:WP_093069393.1;Name=WP_093069393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514360.1;locus_tag=PKHYL_RS13830;product=DUF2789 domain-containing protein;protein_id=WP_093069393.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2584711	2585700	.	-	.	ID=gene-PKHYL_RS13835;Name=PKHYL_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13835;old_locus_tag=PKHYL_33690
NZ_AP019516.1	Protein Homology	CDS	2584711	2585700	.	-	0	ID=cds-WP_178379285.1;Parent=gene-PKHYL_RS13835;Dbxref=Genbank:WP_178379285.1;Name=WP_178379285.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514361.1;locus_tag=PKHYL_RS13835;product=malate dehydrogenase;protein_id=WP_178379285.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2586108	2586749	.	-	.	ID=gene-PKHYL_RS13840;Name=PKHYL_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13840;old_locus_tag=PKHYL_33700
NZ_AP019516.1	Protein Homology	CDS	2586108	2586749	.	-	0	ID=cds-WP_240365413.1;Parent=gene-PKHYL_RS13840;Dbxref=Genbank:WP_240365413.1;Name=WP_240365413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281024.1;locus_tag=PKHYL_RS13840;product=hypothetical protein;protein_id=WP_240365413.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2587229	2589350	.	-	.	ID=gene-PKHYL_RS13845;Name=PKHYL_RS13845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13845;old_locus_tag=PKHYL_33720;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2587229	2589350	.	-	0	ID=cds-PKHYL_RS13845;Parent=gene-PKHYL_RS13845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201501.1;locus_tag=PKHYL_RS13845;product=transglycosylase SLT domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2589698	2591190	.	+	.	ID=gene-PKHYL_RS13850;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=pseudogene;locus_tag=PKHYL_RS13850;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2589698	2591190	.	+	0	ID=cds-PKHYL_RS13850;Parent=gene-PKHYL_RS13850;Note=frameshifted;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444208.1;locus_tag=PKHYL_RS13850;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2591376	2591528	.	-	.	ID=gene-PKHYL_RS13855;Name=PKHYL_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13855;old_locus_tag=PKHYL_33750
NZ_AP019516.1	GeneMarkS-2+	CDS	2591376	2591528	.	-	0	ID=cds-WP_240365414.1;Parent=gene-PKHYL_RS13855;Dbxref=Genbank:WP_240365414.1;Name=WP_240365414.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13855;product=hypothetical protein;protein_id=WP_240365414.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2591661	2592873	.	-	.	ID=gene-PKHYL_RS17780;Name=PKHYL_RS17780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17780;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2591661	2592873	.	-	0	ID=cds-PKHYL_RS17780;Parent=gene-PKHYL_RS17780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009519721.1;locus_tag=PKHYL_RS17780;product=RtcB family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2593450	2593962	.	-	.	ID=gene-PKHYL_RS13870;Name=PKHYL_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13870;old_locus_tag=PKHYL_33800
NZ_AP019516.1	Protein Homology	CDS	2593450	2593962	.	-	0	ID=cds-WP_227517133.1-2;Parent=gene-PKHYL_RS13870;Dbxref=Genbank:WP_227517133.1;Name=WP_227517133.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033545.0;locus_tag=PKHYL_RS13870;product=IS630 family transposase;protein_id=WP_227517133.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2593995	2594300	.	-	.	ID=gene-PKHYL_RS13875;Name=PKHYL_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13875;old_locus_tag=PKHYL_33810
NZ_AP019516.1	Protein Homology	CDS	2593995	2594300	.	-	0	ID=cds-WP_240365416.1;Parent=gene-PKHYL_RS13875;Dbxref=Genbank:WP_240365416.1;Name=WP_240365416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016657973.1;locus_tag=PKHYL_RS13875;product=IS630 transposase-related protein;protein_id=WP_240365416.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2594663	2595391	.	-	.	ID=gene-PKHYL_RS13880;Name=PKHYL_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13880;old_locus_tag=PKHYL_33820
NZ_AP019516.1	Protein Homology	CDS	2594663	2595391	.	-	0	ID=cds-WP_093069383.1;Parent=gene-PKHYL_RS13880;Dbxref=Genbank:WP_093069383.1;Name=WP_093069383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444209.1;locus_tag=PKHYL_RS13880;product=LysE family translocator;protein_id=WP_093069383.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2595543	2596782	.	-	.	ID=gene-PKHYL_RS13885;Name=argE;gbkey=Gene;gene=argE;gene_biotype=pseudogene;locus_tag=PKHYL_RS13885;old_locus_tag=PKHYL_33830;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2595543	2596782	.	-	0	ID=cds-PKHYL_RS13885;Parent=gene-PKHYL_RS13885;Note=frameshifted;Ontology_term=GO:0006592,GO:0008777;gbkey=CDS;gene=argE;go_function=acetylornithine deacetylase activity|0008777||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201506.1;locus_tag=PKHYL_RS13885;product=acetylornithine deacetylase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2596874	2597527	.	-	.	ID=gene-PKHYL_RS13890;Name=PKHYL_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13890;old_locus_tag=PKHYL_33840
NZ_AP019516.1	Protein Homology	CDS	2596874	2597527	.	-	0	ID=cds-WP_071003031.1;Parent=gene-PKHYL_RS13890;Dbxref=Genbank:WP_071003031.1;Name=WP_071003031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395539.1;locus_tag=PKHYL_RS13890;product=UPF0149 family protein;protein_id=WP_071003031.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2597618	2598610	.	-	.	ID=gene-PKHYL_RS13895;Name=PKHYL_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13895;old_locus_tag=PKHYL_33850
NZ_AP019516.1	Protein Homology	CDS	2597618	2598610	.	-	0	ID=cds-WP_240365287.1-7;Parent=gene-PKHYL_RS13895;Dbxref=Genbank:WP_240365287.1;Name=WP_240365287.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=PKHYL_RS13895;product=IS30 family transposase;protein_id=WP_240365287.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2599025	2599147	.	+	.	ID=gene-PKHYL_RS17785;Name=PKHYL_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17785
NZ_AP019516.1	GeneMarkS-2+	CDS	2599025	2599147	.	+	0	ID=cds-WP_269778184.1;Parent=gene-PKHYL_RS17785;Dbxref=Genbank:WP_269778184.1;Name=WP_269778184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17785;product=hypothetical protein;protein_id=WP_269778184.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2599281	2599478	.	+	.	ID=gene-PKHYL_RS13900;Name=PKHYL_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13900
NZ_AP019516.1	GeneMarkS-2+	CDS	2599281	2599478	.	+	0	ID=cds-WP_240365417.1;Parent=gene-PKHYL_RS13900;Dbxref=Genbank:WP_240365417.1;Name=WP_240365417.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13900;product=hypothetical protein;protein_id=WP_240365417.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2599537	2599695	.	+	.	ID=gene-PKHYL_RS13905;Name=PKHYL_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13905
NZ_AP019516.1	Protein Homology	CDS	2599537	2599695	.	+	0	ID=cds-WP_240366543.1;Parent=gene-PKHYL_RS13905;Dbxref=Genbank:WP_240366543.1;Name=WP_240366543.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017016.2;locus_tag=PKHYL_RS13905;product=hypothetical protein;protein_id=WP_240366543.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2599877	2600130	.	-	.	ID=gene-PKHYL_RS13910;Name=PKHYL_RS13910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13910;old_locus_tag=PKHYL_33860;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2599877	2600130	.	-	0	ID=cds-PKHYL_RS13910;Parent=gene-PKHYL_RS13910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201513.1;locus_tag=PKHYL_RS13910;product=hypothetical protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2600421	2602515	.	-	.	ID=gene-PKHYL_RS13915;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=pseudogene;locus_tag=PKHYL_RS13915;old_locus_tag=PKHYL_33880;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2600421	2602515	.	-	0	ID=cds-PKHYL_RS13915;Parent=gene-PKHYL_RS13915;Note=frameshifted;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444215.1;locus_tag=PKHYL_RS13915;product=glycine--tRNA ligase subunit beta;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2602525	2603527	.	-	.	ID=gene-PKHYL_RS13920;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=pseudogene;locus_tag=PKHYL_RS13920;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2602525	2603527	.	-	0	ID=cds-PKHYL_RS13920;Parent=gene-PKHYL_RS13920;Note=frameshifted;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444216.1;locus_tag=PKHYL_RS13920;product=glycine--tRNA ligase subunit alpha;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2603978	2604190	.	-	.	ID=gene-PKHYL_RS13925;Name=PKHYL_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13925;old_locus_tag=PKHYL_33920
NZ_AP019516.1	Protein Homology	CDS	2603978	2604190	.	-	0	ID=cds-WP_071003026.1;Parent=gene-PKHYL_RS13925;Dbxref=Genbank:WP_071003026.1;Name=WP_071003026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514374.1;locus_tag=PKHYL_RS13925;product=PspC domain-containing protein;protein_id=WP_071003026.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2604795	2605841	.	+	.	ID=gene-PKHYL_RS13930;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=PKHYL_RS13930;old_locus_tag=PKHYL_33930
NZ_AP019516.1	Protein Homology	CDS	2604795	2605841	.	+	0	ID=cds-WP_240365418.1;Parent=gene-PKHYL_RS13930;Dbxref=Genbank:WP_240365418.1;Name=WP_240365418.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF005988.0;locus_tag=PKHYL_RS13930;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_240365418.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2605957	2606688	.	+	.	ID=gene-PKHYL_RS13935;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=PKHYL_RS13935;old_locus_tag=PKHYL_33940
NZ_AP019516.1	Protein Homology	CDS	2605957	2606688	.	+	0	ID=cds-WP_071003024.1;Parent=gene-PKHYL_RS13935;Dbxref=Genbank:WP_071003024.1;Name=WP_071003024.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444219.1;locus_tag=PKHYL_RS13935;product=nicotinamide riboside transporter PnuC;protein_id=WP_071003024.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2606901	2607335	.	+	.	ID=gene-PKHYL_RS13940;Name=PKHYL_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13940;old_locus_tag=PKHYL_33950
NZ_AP019516.1	Protein Homology	CDS	2606901	2607335	.	+	0	ID=cds-WP_071003023.1;Parent=gene-PKHYL_RS13940;Dbxref=Genbank:WP_071003023.1;Name=WP_071003023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395926.1;locus_tag=PKHYL_RS13940;product=DUF962 domain-containing protein;protein_id=WP_071003023.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2607509	2608120	.	-	.	ID=gene-PKHYL_RS13945;Name=PKHYL_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13945;old_locus_tag=PKHYL_33960
NZ_AP019516.1	Protein Homology	CDS	2607509	2608120	.	-	0	ID=cds-WP_071003022.1;Parent=gene-PKHYL_RS13945;Dbxref=Genbank:WP_071003022.1;Name=WP_071003022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513876.1;locus_tag=PKHYL_RS13945;product=nitroreductase family protein;protein_id=WP_071003022.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2608428	2609267	.	-	.	ID=gene-PKHYL_RS13950;Name=PKHYL_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13950;old_locus_tag=PKHYL_33970
NZ_AP019516.1	Protein Homology	CDS	2608428	2609267	.	-	0	ID=cds-WP_240365419.1;Parent=gene-PKHYL_RS13950;Dbxref=Genbank:WP_240365419.1;Name=WP_240365419.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014708.2;locus_tag=PKHYL_RS13950;product=pirin family protein;protein_id=WP_240365419.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2609335	2610049	.	-	.	ID=gene-PKHYL_RS13955;Name=PKHYL_RS13955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13955;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2609335	2610049	.	-	0	ID=cds-PKHYL_RS13955;Parent=gene-PKHYL_RS13955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660307.1;locus_tag=PKHYL_RS13955;product=pirin family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2610232	2611112	.	+	.	ID=gene-PKHYL_RS13960;Name=PKHYL_RS13960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13960;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2610232	2611112	.	+	0	ID=cds-PKHYL_RS13960;Parent=gene-PKHYL_RS13960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.2;locus_tag=PKHYL_RS13960;product=LysR family transcriptional regulator;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2611204	2611608	.	-	.	ID=gene-PKHYL_RS13965;Name=PKHYL_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13965;old_locus_tag=PKHYL_34020
NZ_AP019516.1	GeneMarkS-2+	CDS	2611204	2611608	.	-	0	ID=cds-WP_143007412.1;Parent=gene-PKHYL_RS13965;Dbxref=Genbank:WP_143007412.1;Name=WP_143007412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13965;product=hypothetical protein;protein_id=WP_143007412.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2611617	2612150	.	-	.	ID=gene-PKHYL_RS13970;Name=PKHYL_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13970;old_locus_tag=PKHYL_34030
NZ_AP019516.1	GeneMarkS-2+	CDS	2611617	2612150	.	-	0	ID=cds-WP_240365420.1;Parent=gene-PKHYL_RS13970;Dbxref=Genbank:WP_240365420.1;Name=WP_240365420.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13970;product=hypothetical protein;protein_id=WP_240365420.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2612155	2612424	.	-	.	ID=gene-PKHYL_RS13975;Name=PKHYL_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13975;old_locus_tag=PKHYL_34040
NZ_AP019516.1	GeneMarkS-2+	CDS	2612155	2612424	.	-	0	ID=cds-WP_240365421.1;Parent=gene-PKHYL_RS13975;Dbxref=Genbank:WP_240365421.1;Name=WP_240365421.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS13975;product=hypothetical protein;protein_id=WP_240365421.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2612528	2612881	.	-	.	ID=gene-PKHYL_RS13980;Name=PKHYL_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13980;old_locus_tag=PKHYL_34050
NZ_AP019516.1	Protein Homology	CDS	2612528	2612881	.	-	0	ID=cds-WP_240365422.1;Parent=gene-PKHYL_RS13980;Dbxref=Genbank:WP_240365422.1;Name=WP_240365422.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016807.2;locus_tag=PKHYL_RS13980;product=BLUF domain-containing protein;protein_id=WP_240365422.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2613211	2613570	.	-	.	ID=gene-PKHYL_RS13985;Name=PKHYL_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS13985;old_locus_tag=PKHYL_34060
NZ_AP019516.1	Protein Homology	CDS	2613211	2613570	.	-	0	ID=cds-WP_071003016.1;Parent=gene-PKHYL_RS13985;Dbxref=Genbank:WP_071003016.1;Name=WP_071003016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010117832.1;locus_tag=PKHYL_RS13985;product=hypothetical protein;protein_id=WP_071003016.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2614006	2615141	.	+	.	ID=gene-PKHYL_RS13990;Name=PKHYL_RS13990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS13990;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2614006	2615141	.	+	0	ID=cds-PKHYL_RS13990;Parent=gene-PKHYL_RS13990;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611560.1;locus_tag=PKHYL_RS13990;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2615383	2615457	.	-	.	ID=gene-PKHYL_RS13995;Name=PKHYL_RS13995;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS13995;old_locus_tag=PKHYL_t00370
NZ_AP019516.1	tRNAscan-SE	tRNA	2615383	2615457	.	-	.	ID=rna-PKHYL_RS13995;Parent=gene-PKHYL_RS13995;anticodon=(pos:complement(2615423..2615425));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS13995;product=tRNA-Gly
NZ_AP019516.1	tRNAscan-SE	exon	2615383	2615457	.	-	.	ID=exon-PKHYL_RS13995-1;Parent=rna-PKHYL_RS13995;anticodon=(pos:complement(2615423..2615425));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS13995;product=tRNA-Gly
NZ_AP019516.1	RefSeq	gene	2616041	2616853	.	+	.	ID=gene-PKHYL_RS14000;Name=PKHYL_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14000;old_locus_tag=PKHYL_34090
NZ_AP019516.1	Protein Homology	CDS	2616041	2616853	.	+	0	ID=cds-WP_212564190.1;Parent=gene-PKHYL_RS14000;Dbxref=Genbank:WP_212564190.1;Name=WP_212564190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514379.1;locus_tag=PKHYL_RS14000;product=M48 family metallopeptidase;protein_id=WP_212564190.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2617083	2617403	.	+	.	ID=gene-PKHYL_RS14005;Name=PKHYL_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14005;old_locus_tag=PKHYL_34100
NZ_AP019516.1	Protein Homology	CDS	2617083	2617403	.	+	0	ID=cds-WP_212564189.1;Parent=gene-PKHYL_RS14005;Dbxref=Genbank:WP_212564189.1;Name=WP_212564189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201533.1;locus_tag=PKHYL_RS14005;product=BolA family transcriptional regulator;protein_id=WP_212564189.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2617464	2617823	.	+	.	ID=gene-PKHYL_RS14010;Name=PKHYL_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14010;old_locus_tag=PKHYL_34110
NZ_AP019516.1	Protein Homology	CDS	2617464	2617823	.	+	0	ID=cds-WP_212564188.1;Parent=gene-PKHYL_RS14010;Dbxref=Genbank:WP_212564188.1;Name=WP_212564188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281045.1;locus_tag=PKHYL_RS14010;product=SirB2 family protein;protein_id=WP_212564188.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2618009	2618410	.	+	.	ID=gene-PKHYL_RS14015;Name=PKHYL_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14015;old_locus_tag=PKHYL_34120
NZ_AP019516.1	Protein Homology	CDS	2618009	2618410	.	+	0	ID=cds-WP_071003013.1;Parent=gene-PKHYL_RS14015;Dbxref=Genbank:WP_071003013.1;Name=WP_071003013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514382.1;locus_tag=PKHYL_RS14015;product=hypothetical protein;protein_id=WP_071003013.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2618550	2618987	.	-	.	ID=gene-PKHYL_RS14020;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=PKHYL_RS14020;old_locus_tag=PKHYL_34130
NZ_AP019516.1	Protein Homology	CDS	2618550	2618987	.	-	0	ID=cds-WP_240365423.1;Parent=gene-PKHYL_RS14020;Dbxref=Genbank:WP_240365423.1;Name=WP_240365423.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514383.1;locus_tag=PKHYL_RS14020;product=thioredoxin;protein_id=WP_240365423.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2619126	2619998	.	-	.	ID=gene-PKHYL_RS14025;Name=PKHYL_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14025;old_locus_tag=PKHYL_34140
NZ_AP019516.1	Protein Homology	CDS	2619126	2619998	.	-	0	ID=cds-WP_240365424.1;Parent=gene-PKHYL_RS14025;Dbxref=Genbank:WP_240365424.1;Name=WP_240365424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444224.1;locus_tag=PKHYL_RS14025;product=MBL fold metallo-hydrolase;protein_id=WP_240365424.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2620285	2620653	.	+	.	ID=gene-PKHYL_RS14030;Name=PKHYL_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14030;old_locus_tag=PKHYL_34160
NZ_AP019516.1	Protein Homology	CDS	2620285	2620653	.	+	0	ID=cds-WP_240365425.1;Parent=gene-PKHYL_RS14030;Dbxref=Genbank:WP_240365425.1;Name=WP_240365425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011960127.1;locus_tag=PKHYL_RS14030;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_240365425.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2620708	2622417	.	+	.	ID=gene-PKHYL_RS14035;Name=PKHYL_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14035;old_locus_tag=PKHYL_34170
NZ_AP019516.1	Protein Homology	CDS	2620708	2622417	.	+	0	ID=cds-WP_071003010.1;Parent=gene-PKHYL_RS14035;Dbxref=Genbank:WP_071003010.1;Name=WP_071003010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201551.1;locus_tag=PKHYL_RS14035;product=SulP family inorganic anion transporter;protein_id=WP_071003010.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2622643	2622969	.	+	.	ID=gene-PKHYL_RS14040;Name=PKHYL_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14040;old_locus_tag=PKHYL_34180
NZ_AP019516.1	Protein Homology	CDS	2622643	2622969	.	+	0	ID=cds-WP_058025715.1;Parent=gene-PKHYL_RS14040;Dbxref=Genbank:WP_058025715.1;Name=WP_058025715.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201552.1;locus_tag=PKHYL_RS14040;product=sulfur transferase domain-containing protein;protein_id=WP_058025715.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2623043	2623375	.	+	.	ID=gene-PKHYL_RS14045;Name=PKHYL_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14045;old_locus_tag=PKHYL_34190
NZ_AP019516.1	Protein Homology	CDS	2623043	2623375	.	+	0	ID=cds-WP_071003008.1;Parent=gene-PKHYL_RS14045;Dbxref=Genbank:WP_071003008.1;Name=WP_071003008.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019838040.1;locus_tag=PKHYL_RS14045;product=TIGR01244 family sulfur transferase;protein_id=WP_071003008.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2623557	2624306	.	+	.	ID=gene-PKHYL_RS14050;Name=PKHYL_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14050;old_locus_tag=PKHYL_34200
NZ_AP019516.1	Protein Homology	CDS	2623557	2624306	.	+	0	ID=cds-WP_071003007.1;Parent=gene-PKHYL_RS14050;Dbxref=Genbank:WP_071003007.1;Name=WP_071003007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201554.1;locus_tag=PKHYL_RS14050;product=glutathione S-transferase family protein;protein_id=WP_071003007.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2624378	2625394	.	-	.	ID=gene-PKHYL_RS14055;Name=PKHYL_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14055;old_locus_tag=PKHYL_34210
NZ_AP019516.1	Protein Homology	CDS	2624378	2625394	.	-	0	ID=cds-WP_240365426.1;Parent=gene-PKHYL_RS14055;Dbxref=Genbank:WP_240365426.1;Name=WP_240365426.1;Ontology_term=GO:0006865,GO:0005416,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:monoatomic cation symporter activity|0005416||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: protein motif:HMM:NF013406.2;locus_tag=PKHYL_RS14055;product=amino acid carrier protein;protein_id=WP_240365426.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2625316	2625759	.	-	.	ID=gene-PKHYL_RS14060;Name=PKHYL_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14060;old_locus_tag=PKHYL_34220
NZ_AP019516.1	Protein Homology	CDS	2625316	2625759	.	-	0	ID=cds-WP_240365427.1;Parent=gene-PKHYL_RS14060;Dbxref=Genbank:WP_240365427.1;Name=WP_240365427.1;Ontology_term=GO:0006814,GO:0032328,GO:0015655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=alanine:sodium symporter activity|0015655||IEA;go_process=sodium ion transport|0006814||IEA,alanine transport|0032328||IEA;inference=COORDINATES: protein motif:HMM:NF013406.2;locus_tag=PKHYL_RS14060;product=alanine:cation symporter family protein;protein_id=WP_240365427.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2626091	2627669	.	-	.	ID=gene-PKHYL_RS14065;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=pseudogene;locus_tag=PKHYL_RS14065;old_locus_tag=PKHYL_34230;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2626091	2627669	.	-	0	ID=cds-PKHYL_RS14065;Parent=gene-PKHYL_RS14065;Note=frameshifted;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444231.1;locus_tag=PKHYL_RS14065;product=alkyl hydroperoxide reductase subunit F;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2628033	2628281	.	+	.	ID=gene-PKHYL_RS14070;Name=PKHYL_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14070;old_locus_tag=PKHYL_34250
NZ_AP019516.1	Protein Homology	CDS	2628033	2628281	.	+	0	ID=cds-WP_240365428.1;Parent=gene-PKHYL_RS14070;Dbxref=Genbank:WP_240365428.1;Name=WP_240365428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444232.1;locus_tag=PKHYL_RS14070;product=DUF465 domain-containing protein;protein_id=WP_240365428.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2628698	2629265	.	-	.	ID=gene-PKHYL_RS14075;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=pseudogene;locus_tag=PKHYL_RS14075;old_locus_tag=PKHYL_34260;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2628698	2629265	.	-	0	ID=cds-PKHYL_RS14075;Parent=gene-PKHYL_RS14075;Note=frameshifted;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656441.1;locus_tag=PKHYL_RS14075;product=alkyl hydroperoxide reductase subunit C;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2629548	2630456	.	+	.	ID=gene-PKHYL_RS14080;Name=PKHYL_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14080;old_locus_tag=PKHYL_34270
NZ_AP019516.1	Protein Homology	CDS	2629548	2630456	.	+	0	ID=cds-WP_058025493.1;Parent=gene-PKHYL_RS14080;Dbxref=Genbank:WP_058025493.1;Name=WP_058025493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444233.1;locus_tag=PKHYL_RS14080;product=hydrogen peroxide-inducible genes activator;protein_id=WP_058025493.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2630480	2631151	.	+	.	ID=gene-PKHYL_RS14085;Name=PKHYL_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14085;old_locus_tag=PKHYL_34280
NZ_AP019516.1	Protein Homology	CDS	2630480	2631151	.	+	0	ID=cds-WP_071003003.1;Parent=gene-PKHYL_RS14085;Dbxref=Genbank:WP_071003003.1;Name=WP_071003003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201566.1;locus_tag=PKHYL_RS14085;product=hypothetical protein;protein_id=WP_071003003.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2631129	2631731	.	-	.	ID=gene-PKHYL_RS14090;Name=PKHYL_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14090;old_locus_tag=PKHYL_34290
NZ_AP019516.1	Protein Homology	CDS	2631129	2631731	.	-	0	ID=cds-WP_071003002.1;Parent=gene-PKHYL_RS14090;Dbxref=Genbank:WP_071003002.1;Name=WP_071003002.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201568.1;locus_tag=PKHYL_RS14090;product=methyltransferase domain-containing protein;protein_id=WP_071003002.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2631926	2632222	.	-	.	ID=gene-PKHYL_RS17790;Name=PKHYL_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17790
NZ_AP019516.1	Protein Homology	CDS	2631926	2632222	.	-	0	ID=cds-WP_269778185.1;Parent=gene-PKHYL_RS17790;Dbxref=Genbank:WP_269778185.1;Name=WP_269778185.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013980.2;locus_tag=PKHYL_RS17790;product=M48 family metallopeptidase;protein_id=WP_269778185.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2632252	2632572	.	-	.	ID=gene-PKHYL_RS17795;Name=PKHYL_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17795;old_locus_tag=PKHYL_34300
NZ_AP019516.1	Protein Homology	CDS	2632252	2632572	.	-	0	ID=cds-WP_269778186.1;Parent=gene-PKHYL_RS17795;Dbxref=Genbank:WP_269778186.1;Name=WP_269778186.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013980.2;locus_tag=PKHYL_RS17795;product=DUF45 domain-containing protein;protein_id=WP_269778186.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2632622	2633722	.	-	.	ID=gene-PKHYL_RS14100;Name=PKHYL_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14100;old_locus_tag=PKHYL_34310
NZ_AP019516.1	Protein Homology	CDS	2632622	2633722	.	-	0	ID=cds-WP_240365429.1;Parent=gene-PKHYL_RS14100;Dbxref=Genbank:WP_240365429.1;Name=WP_240365429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395852.1;locus_tag=PKHYL_RS14100;product=DUF1513 domain-containing protein;protein_id=WP_240365429.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2633730	2634155	.	-	.	ID=gene-PKHYL_RS14105;Name=PKHYL_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14105;old_locus_tag=PKHYL_34320
NZ_AP019516.1	GeneMarkS-2+	CDS	2633730	2634155	.	-	0	ID=cds-WP_240365430.1;Parent=gene-PKHYL_RS14105;Dbxref=Genbank:WP_240365430.1;Name=WP_240365430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14105;product=hypothetical protein;protein_id=WP_240365430.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2634159	2634476	.	-	.	ID=gene-PKHYL_RS14110;Name=PKHYL_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14110;old_locus_tag=PKHYL_34330
NZ_AP019516.1	GeneMarkS-2+	CDS	2634159	2634476	.	-	0	ID=cds-WP_240365431.1;Parent=gene-PKHYL_RS14110;Dbxref=Genbank:WP_240365431.1;Name=WP_240365431.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14110;product=hypothetical protein;protein_id=WP_240365431.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2634425	2635309	.	-	.	ID=gene-PKHYL_RS14115;Name=PKHYL_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14115;old_locus_tag=PKHYL_34340
NZ_AP019516.1	Protein Homology	CDS	2634425	2635309	.	-	0	ID=cds-WP_240365432.1;Parent=gene-PKHYL_RS14115;Dbxref=Genbank:WP_240365432.1;Name=WP_240365432.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020932.2;locus_tag=PKHYL_RS14115;product=peptidase M75;protein_id=WP_240365432.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2635393	2637044	.	-	.	ID=gene-PKHYL_RS14120;Name=PKHYL_RS14120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14120;old_locus_tag=PKHYL_34350;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2635393	2637044	.	-	0	ID=cds-PKHYL_RS14120;Parent=gene-PKHYL_RS14120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201581.1;locus_tag=PKHYL_RS14120;product=thiol oxidoreductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2637271	2638728	.	-	.	ID=gene-PKHYL_RS14125;Name=PKHYL_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14125;old_locus_tag=PKHYL_34370
NZ_AP019516.1	Protein Homology	CDS	2637271	2638728	.	-	0	ID=cds-WP_071002998.1;Parent=gene-PKHYL_RS14125;Dbxref=Genbank:WP_071002998.1;Name=WP_071002998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514401.1;locus_tag=PKHYL_RS14125;product=imelysin;protein_id=WP_071002998.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2639155	2639811	.	-	.	ID=gene-PKHYL_RS14130;Name=PKHYL_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14130;old_locus_tag=PKHYL_34380
NZ_AP019516.1	Protein Homology	CDS	2639155	2639811	.	-	0	ID=cds-WP_071002997.1;Parent=gene-PKHYL_RS14130;Dbxref=Genbank:WP_071002997.1;Name=WP_071002997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201583.1;locus_tag=PKHYL_RS14130;product=OmpA family protein;protein_id=WP_071002997.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2640261	2641226	.	+	.	ID=gene-PKHYL_RS14135;Name=PKHYL_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14135;old_locus_tag=PKHYL_34390
NZ_AP019516.1	Protein Homology	CDS	2640261	2641226	.	+	0	ID=cds-WP_071002996.1;Parent=gene-PKHYL_RS14135;Dbxref=Genbank:WP_071002996.1;Name=WP_071002996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201584.1;locus_tag=PKHYL_RS14135;product=acyltransferase;protein_id=WP_071002996.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2641568	2642659	.	+	.	ID=gene-PKHYL_RS14140;Name=PKHYL_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14140;old_locus_tag=PKHYL_34400
NZ_AP019516.1	Protein Homology	CDS	2641568	2642659	.	+	0	ID=cds-WP_227517143.1;Parent=gene-PKHYL_RS14140;Dbxref=Genbank:WP_227517143.1;Name=WP_227517143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395858.1;locus_tag=PKHYL_RS14140;product=hypothetical protein;protein_id=WP_227517143.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2642736	2643562	.	+	.	ID=gene-PKHYL_RS14145;Name=minC;gbkey=Gene;gene=minC;gene_biotype=pseudogene;locus_tag=PKHYL_RS14145;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2642736	2643562	.	+	0	ID=cds-PKHYL_RS14145;Parent=gene-PKHYL_RS14145;Note=frameshifted%3B internal stop;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201588.1;locus_tag=PKHYL_RS14145;product=septum site-determining protein MinC;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2643977	2644787	.	+	.	ID=gene-PKHYL_RS14150;Name=minD;gbkey=Gene;gene=minD;gene_biotype=pseudogene;locus_tag=PKHYL_RS14150;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2643977	2644787	.	+	0	ID=cds-PKHYL_RS14150;Parent=gene-PKHYL_RS14150;Note=frameshifted;Ontology_term=GO:0000918,GO:0016887;gbkey=CDS;gene=minD;go_function=ATP hydrolysis activity|0016887||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520449.1;locus_tag=PKHYL_RS14150;product=septum site-determining protein MinD;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2644885	2645079	.	+	.	ID=gene-PKHYL_RS14155;Name=PKHYL_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14155;old_locus_tag=PKHYL_34450
NZ_AP019516.1	Protein Homology	CDS	2644885	2645079	.	+	0	ID=cds-WP_240366544.1;Parent=gene-PKHYL_RS14155;Dbxref=Genbank:WP_240366544.1;Name=WP_240366544.1;Ontology_term=GO:0032955,GO:0051301;gbkey=CDS;go_process=regulation of division septum assembly|0032955||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281069.1;locus_tag=PKHYL_RS14155;product=cell division topological specificity factor MinE;protein_id=WP_240366544.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2645224	2645745	.	-	.	ID=gene-PKHYL_RS14160;Name=PKHYL_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14160;old_locus_tag=PKHYL_34460
NZ_AP019516.1	Protein Homology	CDS	2645224	2645745	.	-	0	ID=cds-WP_071002992.1;Parent=gene-PKHYL_RS14160;Dbxref=Genbank:WP_071002992.1;Name=WP_071002992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201591.1;locus_tag=PKHYL_RS14160;product=cytochrome b;protein_id=WP_071002992.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2645887	2646258	.	-	.	ID=gene-PKHYL_RS14165;Name=PKHYL_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14165;old_locus_tag=PKHYL_34470
NZ_AP019516.1	GeneMarkS-2+	CDS	2645887	2646258	.	-	0	ID=cds-WP_240365433.1;Parent=gene-PKHYL_RS14165;Dbxref=Genbank:WP_240365433.1;Name=WP_240365433.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14165;product=hypothetical protein;protein_id=WP_240365433.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2646444	2647403	.	-	.	ID=gene-PKHYL_RS14170;Name=PKHYL_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14170;old_locus_tag=PKHYL_34480
NZ_AP019516.1	Protein Homology	CDS	2646444	2647403	.	-	0	ID=cds-WP_240365434.1;Parent=gene-PKHYL_RS14170;Dbxref=Genbank:WP_240365434.1;Name=WP_240365434.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013502.2;locus_tag=PKHYL_RS14170;product=chemotaxis protein CheB;protein_id=WP_240365434.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2647393	2647665	.	-	.	ID=gene-PKHYL_RS14175;Name=PKHYL_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14175;old_locus_tag=PKHYL_34490
NZ_AP019516.1	Protein Homology	CDS	2647393	2647665	.	-	0	ID=cds-WP_240366545.1;Parent=gene-PKHYL_RS14175;Dbxref=Genbank:WP_240366545.1;Name=WP_240366545.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=PKHYL_RS14175;product=response regulator;protein_id=WP_240366545.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2647638	2649857	.	-	.	ID=gene-PKHYL_RS14180;Name=PKHYL_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14180;old_locus_tag=PKHYL_34500
NZ_AP019516.1	Protein Homology	CDS	2647638	2649857	.	-	0	ID=cds-WP_240365435.1;Parent=gene-PKHYL_RS14180;Dbxref=Genbank:WP_240365435.1;Name=WP_240365435.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=PKHYL_RS14180;product=chemotaxis protein CheA;protein_id=WP_240365435.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2649957	2650472	.	-	.	ID=gene-PKHYL_RS14185;Name=PKHYL_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14185;old_locus_tag=PKHYL_34510
NZ_AP019516.1	Protein Homology	CDS	2649957	2650472	.	-	0	ID=cds-WP_240365436.1;Parent=gene-PKHYL_RS14185;Dbxref=Genbank:WP_240365436.1;Name=WP_240365436.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013767.2;locus_tag=PKHYL_RS14185;product=Hpt domain-containing protein;protein_id=WP_240365436.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2650610	2651137	.	-	.	ID=gene-PKHYL_RS14190;Name=PKHYL_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14190;old_locus_tag=PKHYL_34520
NZ_AP019516.1	Protein Homology	CDS	2650610	2651137	.	-	0	ID=cds-WP_240366546.1;Parent=gene-PKHYL_RS14190;Dbxref=Genbank:WP_240366546.1;Name=WP_240366546.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013767.2;locus_tag=PKHYL_RS14190;product=hypothetical protein;protein_id=WP_240366546.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2651175	2654315	.	-	.	ID=gene-PKHYL_RS14195;Name=PKHYL_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14195;old_locus_tag=PKHYL_34530
NZ_AP019516.1	Protein Homology	CDS	2651175	2654315	.	-	0	ID=cds-WP_240365437.1;Parent=gene-PKHYL_RS14195;Dbxref=Genbank:WP_240365437.1;Name=WP_240365437.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF013767.2;locus_tag=PKHYL_RS14195;product=Hpt domain-containing protein;protein_id=WP_240365437.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2654353	2654949	.	-	.	ID=gene-PKHYL_RS14200;Name=PKHYL_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14200;old_locus_tag=PKHYL_34540
NZ_AP019516.1	Protein Homology	CDS	2654353	2654949	.	-	0	ID=cds-WP_240366547.1;Parent=gene-PKHYL_RS14200;Dbxref=Genbank:WP_240366547.1;Name=WP_240366547.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013867.2;locus_tag=PKHYL_RS14200;product=hypothetical protein;protein_id=WP_240366547.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2654946	2655281	.	-	.	ID=gene-PKHYL_RS14205;Name=PKHYL_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14205;old_locus_tag=PKHYL_34550
NZ_AP019516.1	GeneMarkS-2+	CDS	2654946	2655281	.	-	0	ID=cds-WP_240365438.1;Parent=gene-PKHYL_RS14205;Dbxref=Genbank:WP_240365438.1;Name=WP_240365438.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14205;product=hypothetical protein;protein_id=WP_240365438.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2655391	2656622	.	-	.	ID=gene-PKHYL_RS14210;Name=PKHYL_RS14210;end_range=2656622,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14210;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2655391	2656622	.	-	0	ID=cds-PKHYL_RS14210;Parent=gene-PKHYL_RS14210;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2656622,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519389.1;locus_tag=PKHYL_RS14210;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2656983	2657513	.	-	.	ID=gene-PKHYL_RS14215;Name=PKHYL_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14215;old_locus_tag=PKHYL_34590
NZ_AP019516.1	Protein Homology	CDS	2656983	2657513	.	-	0	ID=cds-WP_071002987.1;Parent=gene-PKHYL_RS14215;Dbxref=Genbank:WP_071002987.1;Name=WP_071002987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281075.1;locus_tag=PKHYL_RS14215;product=chemotaxis protein CheW;protein_id=WP_071002987.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2657517	2657879	.	-	.	ID=gene-PKHYL_RS14220;Name=PKHYL_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14220;old_locus_tag=PKHYL_34600
NZ_AP019516.1	Protein Homology	CDS	2657517	2657879	.	-	0	ID=cds-WP_071002986.1;Parent=gene-PKHYL_RS14220;Dbxref=Genbank:WP_071002986.1;Name=WP_071002986.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514415.1;locus_tag=PKHYL_RS14220;product=response regulator;protein_id=WP_071002986.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2658063	2658440	.	-	.	ID=gene-PKHYL_RS14225;Name=pilG;gbkey=Gene;gene=pilG;gene_biotype=protein_coding;locus_tag=PKHYL_RS14225;old_locus_tag=PKHYL_34610
NZ_AP019516.1	Protein Homology	CDS	2658063	2658440	.	-	0	ID=cds-WP_057761576.1;Parent=gene-PKHYL_RS14225;Dbxref=Genbank:WP_057761576.1;Name=WP_057761576.1;gbkey=CDS;gene=pilG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514416.1;locus_tag=PKHYL_RS14225;product=twitching motility response regulator PilG;protein_id=WP_057761576.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2659119	2659850	.	+	.	ID=gene-PKHYL_RS14230;Name=PKHYL_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14230
NZ_AP019516.1	GeneMarkS-2+	CDS	2659119	2659850	.	+	0	ID=cds-WP_240365439.1;Parent=gene-PKHYL_RS14230;Dbxref=Genbank:WP_240365439.1;Name=WP_240365439.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14230;product=hypothetical protein;protein_id=WP_240365439.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2659826	2660374	.	+	.	ID=gene-PKHYL_RS14235;Name=PKHYL_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14235;old_locus_tag=PKHYL_34630
NZ_AP019516.1	Protein Homology	CDS	2659826	2660374	.	+	0	ID=cds-WP_240365440.1;Parent=gene-PKHYL_RS14235;Dbxref=Genbank:WP_240365440.1;Name=WP_240365440.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024829.2;locus_tag=PKHYL_RS14235;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_240365440.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2660682	2661404	.	+	.	ID=gene-PKHYL_RS14240;Name=PKHYL_RS14240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14240;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2660682	2661404	.	+	0	ID=cds-PKHYL_RS14240;Parent=gene-PKHYL_RS14240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514418.1;locus_tag=PKHYL_RS14240;product=response regulator transcription factor;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2661481	2663532	.	+	.	ID=gene-PKHYL_RS14245;Name=PKHYL_RS14245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14245;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2661481	2663532	.	+	0	ID=cds-PKHYL_RS14245;Parent=gene-PKHYL_RS14245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444254.1;locus_tag=PKHYL_RS14245;product=sensor histidine kinase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2663787	2664557	.	+	.	ID=gene-PKHYL_RS14250;Name=PKHYL_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14250;old_locus_tag=PKHYL_34690
NZ_AP019516.1	Protein Homology	CDS	2663787	2664557	.	+	0	ID=cds-WP_240365441.1;Parent=gene-PKHYL_RS14250;Dbxref=Genbank:WP_240365441.1;Name=WP_240365441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281081.1;locus_tag=PKHYL_RS14250;product=methionine ABC transporter ATP-binding protein;protein_id=WP_240365441.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2664577	2665262	.	+	.	ID=gene-PKHYL_RS14255;Name=PKHYL_RS14255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14255;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2664577	2665262	.	+	0	ID=cds-PKHYL_RS14255;Parent=gene-PKHYL_RS14255;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281082.1;locus_tag=PKHYL_RS14255;product=ABC transporter permease;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2665432	2666410	.	+	.	ID=gene-PKHYL_RS14260;Name=PKHYL_RS14260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14260;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2665432	2666410	.	+	0	ID=cds-PKHYL_RS14260;Parent=gene-PKHYL_RS14260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201633.1;locus_tag=PKHYL_RS14260;product=MetQ/NlpA family ABC transporter substrate-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2666977	2667606	.	+	.	ID=gene-PKHYL_RS14265;Name=PKHYL_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14265;old_locus_tag=PKHYL_34730
NZ_AP019516.1	Protein Homology	CDS	2666977	2667606	.	+	0	ID=cds-WP_240365442.1;Parent=gene-PKHYL_RS14265;Dbxref=Genbank:WP_240365442.1;Name=WP_240365442.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012472.2;locus_tag=PKHYL_RS14265;product=aldo/keto reductase;protein_id=WP_240365442.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2667693	2668193	.	-	.	ID=gene-PKHYL_RS14270;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=PKHYL_RS14270;old_locus_tag=PKHYL_34740
NZ_AP019516.1	Protein Homology	CDS	2667693	2668193	.	-	0	ID=cds-WP_186473638.1;Parent=gene-PKHYL_RS14270;Dbxref=Genbank:WP_186473638.1;Name=WP_186473638.1;Ontology_term=GO:0017003,GO:0017004,GO:0020037;gbkey=CDS;gene=ccmE;go_function=heme binding|0020037||IEA;go_process=protein-heme linkage|0017003||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514424.1;locus_tag=PKHYL_RS14270;product=cytochrome c maturation protein CcmE;protein_id=WP_186473638.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2668448	2668669	.	-	.	ID=gene-PKHYL_RS14275;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=PKHYL_RS14275;old_locus_tag=PKHYL_34750
NZ_AP019516.1	Protein Homology	CDS	2668448	2668669	.	-	0	ID=cds-WP_186473637.1;Parent=gene-PKHYL_RS14275;Dbxref=Genbank:WP_186473637.1;Name=WP_186473637.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514425.1;locus_tag=PKHYL_RS14275;product=heme exporter protein CcmD;protein_id=WP_186473637.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2668686	2669474	.	-	.	ID=gene-PKHYL_RS14280;Name=PKHYL_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14280;old_locus_tag=PKHYL_34760
NZ_AP019516.1	Protein Homology	CDS	2668686	2669474	.	-	0	ID=cds-WP_058025463.1;Parent=gene-PKHYL_RS14280;Dbxref=Genbank:WP_058025463.1;Name=WP_058025463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514426.1;locus_tag=PKHYL_RS14280;product=heme ABC transporter permease;protein_id=WP_058025463.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2669700	2670356	.	-	.	ID=gene-PKHYL_RS14285;Name=PKHYL_RS14285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14285;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2669700	2670356	.	-	0	ID=cds-PKHYL_RS14285;Parent=gene-PKHYL_RS14285;Note=frameshifted;Ontology_term=GO:0015886,GO:0017004,GO:0015232,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004462715.1;locus_tag=PKHYL_RS14285;product=heme exporter protein CcmB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2670492	2671031	.	-	.	ID=gene-PKHYL_RS14290;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=PKHYL_RS14290;old_locus_tag=PKHYL_34790
NZ_AP019516.1	Protein Homology	CDS	2670492	2671031	.	-	0	ID=cds-WP_240365443.1;Parent=gene-PKHYL_RS14290;Dbxref=Genbank:WP_240365443.1;Name=WP_240365443.1;Ontology_term=GO:0015886,GO:0015439,GO:0043190;gbkey=CDS;gene=ccmA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type heme transporter activity|0015439||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: protein motif:HMM:TIGR01189.1;locus_tag=PKHYL_RS14290;product=heme ABC exporter ATP-binding protein CcmA;protein_id=WP_240365443.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2671270	2672163	.	+	.	ID=gene-PKHYL_RS14295;Name=PKHYL_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14295;old_locus_tag=PKHYL_34800
NZ_AP019516.1	GeneMarkS-2+	CDS	2671270	2672163	.	+	0	ID=cds-WP_240365444.1;Parent=gene-PKHYL_RS14295;Dbxref=Genbank:WP_240365444.1;Name=WP_240365444.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14295;product=hypothetical protein;protein_id=WP_240365444.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2672144	2672380	.	+	.	ID=gene-PKHYL_RS14300;Name=PKHYL_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14300;old_locus_tag=PKHYL_34810
NZ_AP019516.1	GeneMarkS-2+	CDS	2672144	2672380	.	+	0	ID=cds-WP_240365445.1;Parent=gene-PKHYL_RS14300;Dbxref=Genbank:WP_240365445.1;Name=WP_240365445.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14300;product=hypothetical protein;protein_id=WP_240365445.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2672411	2672677	.	+	.	ID=gene-PKHYL_RS14305;Name=PKHYL_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14305
NZ_AP019516.1	GeneMarkS-2+	CDS	2672411	2672677	.	+	0	ID=cds-WP_240365446.1;Parent=gene-PKHYL_RS14305;Dbxref=Genbank:WP_240365446.1;Name=WP_240365446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14305;product=hypothetical protein;protein_id=WP_240365446.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2672662	2673180	.	+	.	ID=gene-PKHYL_RS14310;Name=PKHYL_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14310;old_locus_tag=PKHYL_34820
NZ_AP019516.1	Protein Homology	CDS	2672662	2673180	.	+	0	ID=cds-WP_240366548.1;Parent=gene-PKHYL_RS14310;Dbxref=Genbank:WP_240366548.1;Name=WP_240366548.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022182.2;locus_tag=PKHYL_RS14310;product=YbjN domain-containing protein;protein_id=WP_240366548.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2673290	2674207	.	+	.	ID=gene-PKHYL_RS14315;Name=PKHYL_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14315;old_locus_tag=PKHYL_34830
NZ_AP019516.1	Protein Homology	CDS	2673290	2674207	.	+	0	ID=cds-WP_240365447.1;Parent=gene-PKHYL_RS14315;Dbxref=Genbank:WP_240365447.1;Name=WP_240365447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514431.1;locus_tag=PKHYL_RS14315;product=histone deacetylase;protein_id=WP_240365447.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2674264	2674470	.	+	.	ID=gene-PKHYL_RS14320;Name=PKHYL_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14320;old_locus_tag=PKHYL_34840
NZ_AP019516.1	Protein Homology	CDS	2674264	2674470	.	+	0	ID=cds-WP_071002974.1;Parent=gene-PKHYL_RS14320;Dbxref=Genbank:WP_071002974.1;Name=WP_071002974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007115869.1;locus_tag=PKHYL_RS14320;product=DUF2905 domain-containing protein;protein_id=WP_071002974.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2674627	2675410	.	-	.	ID=gene-PKHYL_RS14325;Name=PKHYL_RS14325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14325;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2674627	2675410	.	-	0	ID=cds-PKHYL_RS14325;Parent=gene-PKHYL_RS14325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514432.1;locus_tag=PKHYL_RS14325;product=sulfite exporter TauE/SafE family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2675453	2676835	.	-	.	ID=gene-PKHYL_RS14330;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=PKHYL_RS14330;old_locus_tag=PKHYL_34870
NZ_AP019516.1	Protein Homology	CDS	2675453	2676835	.	-	0	ID=cds-WP_240365448.1;Parent=gene-PKHYL_RS14330;Dbxref=Genbank:WP_240365448.1;Name=WP_240365448.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514433.1;locus_tag=PKHYL_RS14330;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_240365448.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2676964	2677648	.	+	.	ID=gene-PKHYL_RS14335;Name=radC;gbkey=Gene;gene=radC;gene_biotype=pseudogene;locus_tag=PKHYL_RS14335;old_locus_tag=PKHYL_34880;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2676964	2677648	.	+	0	ID=cds-PKHYL_RS14335;Parent=gene-PKHYL_RS14335;Note=frameshifted;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201649.1;locus_tag=PKHYL_RS14335;product=DNA repair protein RadC;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2678011	2680451	.	+	.	ID=gene-PKHYL_RS14340;Name=PKHYL_RS14340;end_range=2680451,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14340;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2678011	2680451	.	+	0	ID=cds-PKHYL_RS14340;Parent=gene-PKHYL_RS14340;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2680451,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005138383.1;locus_tag=PKHYL_RS14340;partial=true;product=acyl-CoA dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2681413	2682789	.	+	.	ID=gene-PKHYL_RS14345;Name=PKHYL_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14345;old_locus_tag=PKHYL_34920
NZ_AP019516.1	Protein Homology	CDS	2681413	2682789	.	+	0	ID=cds-WP_240365449.1;Parent=gene-PKHYL_RS14345;Dbxref=Genbank:WP_240365449.1;Name=WP_240365449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201651.1;locus_tag=PKHYL_RS14345;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_240365449.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2682884	2683640	.	-	.	ID=gene-PKHYL_RS14350;Name=PKHYL_RS14350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14350;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2682884	2683640	.	-	0	ID=cds-PKHYL_RS14350;Parent=gene-PKHYL_RS14350;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514437.1;locus_tag=PKHYL_RS14350;product=TSUP family transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2684141	2685344	.	+	.	ID=gene-PKHYL_RS14355;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=pseudogene;locus_tag=PKHYL_RS14355;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2684141	2685344	.	+	0	ID=cds-PKHYL_RS14355;Parent=gene-PKHYL_RS14355;Note=frameshifted;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672596.1;locus_tag=PKHYL_RS14355;product=Na+/H+ antiporter NhaA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2685722	2687002	.	+	.	ID=gene-PKHYL_RS14360;Name=PKHYL_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14360;old_locus_tag=PKHYL_34970
NZ_AP019516.1	Protein Homology	CDS	2685722	2687002	.	+	0	ID=cds-WP_240365450.1;Parent=gene-PKHYL_RS14360;Dbxref=Genbank:WP_240365450.1;Name=WP_240365450.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021509.2;locus_tag=PKHYL_RS14360;product=oxygenase MpaB family protein;protein_id=WP_240365450.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2687084	2687818	.	-	.	ID=gene-PKHYL_RS14365;Name=PKHYL_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14365;old_locus_tag=PKHYL_34980
NZ_AP019516.1	Protein Homology	CDS	2687084	2687818	.	-	0	ID=cds-WP_071002967.1;Parent=gene-PKHYL_RS14365;Dbxref=Genbank:WP_071002967.1;Name=WP_071002967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444274.1;locus_tag=PKHYL_RS14365;product=CoA pyrophosphatase;protein_id=WP_071002967.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2688582	2689397	.	+	.	ID=gene-PKHYL_RS14370;Name=PKHYL_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14370;old_locus_tag=PKHYL_34990
NZ_AP019516.1	Protein Homology	CDS	2688582	2689397	.	+	0	ID=cds-WP_071002966.1;Parent=gene-PKHYL_RS14370;Dbxref=Genbank:WP_071002966.1;Name=WP_071002966.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=PKHYL_RS14370;product=SDR family oxidoreductase;protein_id=WP_071002966.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2689390	2689980	.	+	.	ID=gene-PKHYL_RS17800;Name=PKHYL_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17800;old_locus_tag=PKHYL_35000
NZ_AP019516.1	Protein Homology	CDS	2689390	2689980	.	+	0	ID=cds-WP_269778187.1;Parent=gene-PKHYL_RS17800;Dbxref=Genbank:WP_269778187.1;Name=WP_269778187.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018877.2;locus_tag=PKHYL_RS17800;product=AGE family epimerase/isomerase;protein_id=WP_269778187.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2689956	2690672	.	+	.	ID=gene-PKHYL_RS17805;Name=PKHYL_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17805;old_locus_tag=PKHYL_35010
NZ_AP019516.1	Protein Homology	CDS	2689956	2690672	.	+	0	ID=cds-WP_269778188.1;Parent=gene-PKHYL_RS17805;Dbxref=Genbank:WP_269778188.1;Name=WP_269778188.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018877.2;locus_tag=PKHYL_RS17805;product=AGE family epimerase/isomerase;protein_id=WP_269778188.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2690912	2691476	.	+	.	ID=gene-PKHYL_RS14380;Name=PKHYL_RS14380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14380;old_locus_tag=PKHYL_35020;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2690912	2691476	.	+	0	ID=cds-PKHYL_RS14380;Parent=gene-PKHYL_RS14380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281100.1;locus_tag=PKHYL_RS14380;product=NUDIX hydrolase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2691545	2694625	.	-	.	ID=gene-PKHYL_RS14385;Name=PKHYL_RS14385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14385;old_locus_tag=PKHYL_35040;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2691545	2694625	.	-	0	ID=cds-PKHYL_RS14385;Parent=gene-PKHYL_RS14385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514444.1;locus_tag=PKHYL_RS14385;product=insulinase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2695440	2695901	.	+	.	ID=gene-PKHYL_RS14390;Name=PKHYL_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14390;old_locus_tag=PKHYL_35060
NZ_AP019516.1	Protein Homology	CDS	2695440	2695901	.	+	0	ID=cds-WP_071002963.1;Parent=gene-PKHYL_RS14390;Dbxref=Genbank:WP_071002963.1;Name=WP_071002963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514445.1;locus_tag=PKHYL_RS14390;product=universal stress protein;protein_id=WP_071002963.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2696002	2696937	.	-	.	ID=gene-PKHYL_RS14395;Name=PKHYL_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14395;old_locus_tag=PKHYL_35070
NZ_AP019516.1	Protein Homology	CDS	2696002	2696937	.	-	0	ID=cds-WP_071002962.1;Parent=gene-PKHYL_RS14395;Dbxref=Genbank:WP_071002962.1;Name=WP_071002962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201659.1;locus_tag=PKHYL_RS14395;product=LysR substrate-binding domain-containing protein;protein_id=WP_071002962.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2697160	2698284	.	+	.	ID=gene-PKHYL_RS14400;Name=PKHYL_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14400;old_locus_tag=PKHYL_35080
NZ_AP019516.1	Protein Homology	CDS	2697160	2698284	.	+	0	ID=cds-WP_071002961.1;Parent=gene-PKHYL_RS14400;Dbxref=Genbank:WP_071002961.1;Name=WP_071002961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514447.1;locus_tag=PKHYL_RS14400;product=YeiH family putative sulfate export transporter;protein_id=WP_071002961.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2698469	2698678	.	-	.	ID=gene-PKHYL_RS14405;Name=PKHYL_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14405;old_locus_tag=PKHYL_35090
NZ_AP019516.1	Protein Homology	CDS	2698469	2698678	.	-	0	ID=cds-WP_025644841.1;Parent=gene-PKHYL_RS14405;Dbxref=Genbank:WP_025644841.1;Name=WP_025644841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004648869.1;locus_tag=PKHYL_RS14405;product=cold-shock protein;protein_id=WP_025644841.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2698912	2699337	.	-	.	ID=gene-PKHYL_RS14410;Name=PKHYL_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14410;old_locus_tag=PKHYL_35100
NZ_AP019516.1	Protein Homology	CDS	2698912	2699337	.	-	0	ID=cds-WP_071002960.1;Parent=gene-PKHYL_RS14410;Dbxref=Genbank:WP_071002960.1;Name=WP_071002960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281105.1;locus_tag=PKHYL_RS14410;product=YbaN family protein;protein_id=WP_071002960.1;transl_table=11
NZ_AP019516.1	cmsearch	riboswitch	2699897	2700014	.	+	.	ID=id-NZ_AP019516.1:2699897..2700014;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_AP019516.1	RefSeq	gene	2700165	2701061	.	+	.	ID=gene-PKHYL_RS14415;Name=PKHYL_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14415;old_locus_tag=PKHYL_35110
NZ_AP019516.1	Protein Homology	CDS	2700165	2701061	.	+	0	ID=cds-WP_240365451.1;Parent=gene-PKHYL_RS14415;Dbxref=Genbank:WP_240365451.1;Name=WP_240365451.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020650.2;locus_tag=PKHYL_RS14415;product=ABC transporter substrate-binding protein;protein_id=WP_240365451.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2701163	2701780	.	-	.	ID=gene-PKHYL_RS14420;Name=PKHYL_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14420;old_locus_tag=PKHYL_35120
NZ_AP019516.1	GeneMarkS-2+	CDS	2701163	2701780	.	-	0	ID=cds-WP_240365452.1;Parent=gene-PKHYL_RS14420;Dbxref=Genbank:WP_240365452.1;Name=WP_240365452.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14420;product=hypothetical protein;protein_id=WP_240365452.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2701789	2702076	.	-	.	ID=gene-PKHYL_RS14425;Name=PKHYL_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14425;old_locus_tag=PKHYL_35130
NZ_AP019516.1	GeneMarkS-2+	CDS	2701789	2702076	.	-	0	ID=cds-WP_240365453.1;Parent=gene-PKHYL_RS14425;Dbxref=Genbank:WP_240365453.1;Name=WP_240365453.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14425;product=hypothetical protein;protein_id=WP_240365453.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2702312	2702845	.	-	.	ID=gene-PKHYL_RS14430;Name=PKHYL_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14430;old_locus_tag=PKHYL_35140
NZ_AP019516.1	GeneMarkS-2+	CDS	2702312	2702845	.	-	0	ID=cds-WP_240365454.1;Parent=gene-PKHYL_RS14430;Dbxref=Genbank:WP_240365454.1;Name=WP_240365454.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14430;product=hypothetical protein;protein_id=WP_240365454.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2703211	2706145	.	-	.	ID=gene-PKHYL_RS14435;Name=PKHYL_RS14435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14435;old_locus_tag=PKHYL_35160;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2703211	2706145	.	-	0	ID=cds-PKHYL_RS14435;Parent=gene-PKHYL_RS14435;Note=frameshifted;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395886.1;locus_tag=PKHYL_RS14435;product=valine--tRNA ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2706263	2706757	.	+	.	ID=gene-PKHYL_RS14440;Name=PKHYL_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14440;old_locus_tag=PKHYL_35170
NZ_AP019516.1	GeneMarkS-2+	CDS	2706263	2706757	.	+	0	ID=cds-WP_240365455.1;Parent=gene-PKHYL_RS14440;Dbxref=Genbank:WP_240365455.1;Name=WP_240365455.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14440;product=hypothetical protein;protein_id=WP_240365455.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2706888	2707586	.	+	.	ID=gene-PKHYL_RS14445;Name=PKHYL_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14445;old_locus_tag=PKHYL_35180
NZ_AP019516.1	Protein Homology	CDS	2706888	2707586	.	+	0	ID=cds-WP_240365456.1;Parent=gene-PKHYL_RS14445;Dbxref=Genbank:WP_240365456.1;Name=WP_240365456.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013397.2;locus_tag=PKHYL_RS14445;product=formate/nitrite transporter family protein;protein_id=WP_240365456.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2707754	2708362	.	-	.	ID=gene-PKHYL_RS14450;Name=PKHYL_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14450;old_locus_tag=PKHYL_35190
NZ_AP019516.1	Protein Homology	CDS	2707754	2708362	.	-	0	ID=cds-WP_240365457.1;Parent=gene-PKHYL_RS14450;Dbxref=Genbank:WP_240365457.1;Name=WP_240365457.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024981.2;locus_tag=PKHYL_RS14450;product=hypothetical protein;protein_id=WP_240365457.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2708359	2708676	.	-	.	ID=gene-PKHYL_RS14455;Name=PKHYL_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14455;old_locus_tag=PKHYL_35200
NZ_AP019516.1	Protein Homology	CDS	2708359	2708676	.	-	0	ID=cds-WP_240365458.1;Parent=gene-PKHYL_RS14455;Dbxref=Genbank:WP_240365458.1;Name=WP_240365458.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013885.2;locus_tag=PKHYL_RS14455;product=hypothetical protein;protein_id=WP_240365458.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2708999	2709421	.	-	.	ID=gene-PKHYL_RS14460;Name=PKHYL_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14460;old_locus_tag=PKHYL_35210
NZ_AP019516.1	Protein Homology	CDS	2708999	2709421	.	-	0	ID=cds-WP_240365459.1;Parent=gene-PKHYL_RS14460;Dbxref=Genbank:WP_240365459.1;Name=WP_240365459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673531.1;locus_tag=PKHYL_RS14460;product=heavy metal-binding domain-containing protein;protein_id=WP_240365459.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2709598	2710035	.	-	.	ID=gene-PKHYL_RS14465;Name=PKHYL_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14465;old_locus_tag=PKHYL_35220
NZ_AP019516.1	Protein Homology	CDS	2709598	2710035	.	-	0	ID=cds-WP_071002954.1;Parent=gene-PKHYL_RS14465;Dbxref=Genbank:WP_071002954.1;Name=WP_071002954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201672.1;locus_tag=PKHYL_RS14465;product=YbjQ family protein;protein_id=WP_071002954.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2710145	2710489	.	-	.	ID=gene-PKHYL_RS14470;Name=PKHYL_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14470;old_locus_tag=PKHYL_35230
NZ_AP019516.1	Protein Homology	CDS	2710145	2710489	.	-	0	ID=cds-WP_240365460.1;Parent=gene-PKHYL_RS14470;Dbxref=Genbank:WP_240365460.1;Name=WP_240365460.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015642.2;locus_tag=PKHYL_RS14470;product=YecA family protein;protein_id=WP_240365460.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2710949	2711185	.	-	.	ID=gene-PKHYL_RS14475;Name=PKHYL_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14475;old_locus_tag=PKHYL_35240
NZ_AP019516.1	Protein Homology	CDS	2710949	2711185	.	-	0	ID=cds-WP_057761656.1;Parent=gene-PKHYL_RS14475;Dbxref=Genbank:WP_057761656.1;Name=WP_057761656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519256.1;locus_tag=PKHYL_RS14475;product=hypothetical protein;protein_id=WP_057761656.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2711372	2711725	.	-	.	ID=gene-PKHYL_RS14480;Name=PKHYL_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14480;old_locus_tag=PKHYL_35250
NZ_AP019516.1	GeneMarkS-2+	CDS	2711372	2711725	.	-	0	ID=cds-WP_240365461.1;Parent=gene-PKHYL_RS14480;Dbxref=Genbank:WP_240365461.1;Name=WP_240365461.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14480;product=hypothetical protein;protein_id=WP_240365461.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2711740	2712837	.	-	.	ID=gene-PKHYL_RS14485;Name=PKHYL_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14485;old_locus_tag=PKHYL_35260
NZ_AP019516.1	GeneMarkS-2+	CDS	2711740	2712837	.	-	0	ID=cds-WP_240365462.1;Parent=gene-PKHYL_RS14485;Dbxref=Genbank:WP_240365462.1;Name=WP_240365462.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14485;product=hypothetical protein;protein_id=WP_240365462.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2713316	2713738	.	+	.	ID=gene-PKHYL_RS14490;Name=PKHYL_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14490;old_locus_tag=PKHYL_35270
NZ_AP019516.1	GeneMarkS-2+	CDS	2713316	2713738	.	+	0	ID=cds-WP_240365463.1;Parent=gene-PKHYL_RS14490;Dbxref=Genbank:WP_240365463.1;Name=WP_240365463.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14490;product=hypothetical protein;protein_id=WP_240365463.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2713861	2714506	.	+	.	ID=gene-PKHYL_RS14495;Name=serB;gbkey=Gene;gene=serB;gene_biotype=pseudogene;locus_tag=PKHYL_RS14495;partial=true;pseudo=true;start_range=.,2713861
NZ_AP019516.1	Protein Homology	CDS	2713861	2714506	.	+	0	ID=cds-PKHYL_RS14495;Parent=gene-PKHYL_RS14495;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201676.1;locus_tag=PKHYL_RS14495;partial=true;product=phosphoserine phosphatase SerB;pseudo=true;start_range=.,2713861;transl_table=11
NZ_AP019516.1	RefSeq	gene	2714665	2715672	.	+	.	ID=gene-PKHYL_RS14500;Name=PKHYL_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14500;old_locus_tag=PKHYL_35310
NZ_AP019516.1	Protein Homology	CDS	2714665	2715672	.	+	0	ID=cds-WP_093069245.1;Parent=gene-PKHYL_RS14500;Dbxref=Genbank:WP_093069245.1;Name=WP_093069245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201677.1;locus_tag=PKHYL_RS14500;product=DUF368 domain-containing protein;protein_id=WP_093069245.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2715955	2716347	.	+	.	ID=gene-PKHYL_RS14505;Name=PKHYL_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14505;old_locus_tag=PKHYL_35320
NZ_AP019516.1	Protein Homology	CDS	2715955	2716347	.	+	0	ID=cds-WP_227517140.1;Parent=gene-PKHYL_RS14505;Dbxref=Genbank:WP_227517140.1;Name=WP_227517140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514461.1;locus_tag=PKHYL_RS14505;product=hypothetical protein;protein_id=WP_227517140.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2716537	2717043	.	+	.	ID=gene-PKHYL_RS14510;Name=PKHYL_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14510;old_locus_tag=PKHYL_35330
NZ_AP019516.1	Protein Homology	CDS	2716537	2717043	.	+	0	ID=cds-WP_071002949.1;Parent=gene-PKHYL_RS14510;Dbxref=Genbank:WP_071002949.1;Name=WP_071002949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514462.1;locus_tag=PKHYL_RS14510;product=SCP2 sterol-binding domain-containing protein;protein_id=WP_071002949.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2717300	2718412	.	+	.	ID=gene-PKHYL_RS14515;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=PKHYL_RS14515;old_locus_tag=PKHYL_35340
NZ_AP019516.1	Protein Homology	CDS	2717300	2718412	.	+	0	ID=cds-WP_075106707.1;Parent=gene-PKHYL_RS14515;Dbxref=Genbank:WP_075106707.1;Name=WP_075106707.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201680.1;locus_tag=PKHYL_RS14515;product=biotin synthase BioB;protein_id=WP_075106707.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2718488	2718922	.	+	.	ID=gene-PKHYL_RS14520;Name=hemJ;gbkey=Gene;gene=hemJ;gene_biotype=protein_coding;locus_tag=PKHYL_RS14520;old_locus_tag=PKHYL_35350
NZ_AP019516.1	Protein Homology	CDS	2718488	2718922	.	+	0	ID=cds-WP_186473602.1;Parent=gene-PKHYL_RS14520;Dbxref=Genbank:WP_186473602.1;Name=WP_186473602.1;gbkey=CDS;gene=hemJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201681.1;locus_tag=PKHYL_RS14520;product=protoporphyrinogen oxidase HemJ;protein_id=WP_186473602.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2719036	2719800	.	-	.	ID=gene-PKHYL_RS14525;Name=PKHYL_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14525;old_locus_tag=PKHYL_35360
NZ_AP019516.1	Protein Homology	CDS	2719036	2719800	.	-	0	ID=cds-WP_240365464.1;Parent=gene-PKHYL_RS14525;Dbxref=Genbank:WP_240365464.1;Name=WP_240365464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514465.1;locus_tag=PKHYL_RS14525;product=hypothetical protein;protein_id=WP_240365464.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2719799	2720014	.	+	.	ID=gene-PKHYL_RS14530;Name=PKHYL_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14530;old_locus_tag=PKHYL_35370
NZ_AP019516.1	GeneMarkS-2+	CDS	2719799	2720014	.	+	0	ID=cds-WP_240365465.1;Parent=gene-PKHYL_RS14530;Dbxref=Genbank:WP_240365465.1;Name=WP_240365465.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14530;product=hypothetical protein;protein_id=WP_240365465.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2720068	2720559	.	-	.	ID=gene-PKHYL_RS14535;Name=PKHYL_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14535;old_locus_tag=PKHYL_35380
NZ_AP019516.1	Protein Homology	CDS	2720068	2720559	.	-	0	ID=cds-WP_240365466.1;Parent=gene-PKHYL_RS14535;Dbxref=Genbank:WP_240365466.1;Name=WP_240365466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514466.1;locus_tag=PKHYL_RS14535;product=hypothetical protein;protein_id=WP_240365466.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2720679	2721394	.	-	.	ID=gene-PKHYL_RS14540;Name=rph;gbkey=Gene;gene=rph;gene_biotype=pseudogene;locus_tag=PKHYL_RS14540;old_locus_tag=PKHYL_35390;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2720679	2721394	.	-	0	ID=cds-PKHYL_RS14540;Parent=gene-PKHYL_RS14540;Note=frameshifted;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009584291.1;locus_tag=PKHYL_RS14540;product=ribonuclease PH;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2721577	2723375	.	-	.	ID=gene-PKHYL_RS14545;Name=PKHYL_RS14545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14545;old_locus_tag=PKHYL_35400;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2721577	2723375	.	-	0	ID=cds-PKHYL_RS14545;Parent=gene-PKHYL_RS14545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201685.1;locus_tag=PKHYL_RS14545;product=AMP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2723816	2725541	.	-	.	ID=gene-PKHYL_RS17810;Name=PKHYL_RS17810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17810;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2723816	2725541	.	-	0	ID=cds-PKHYL_RS17810;Parent=gene-PKHYL_RS17810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514469.1;locus_tag=PKHYL_RS17810;product=AMP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2726320	2728628	.	+	.	ID=gene-PKHYL_RS14565;Name=parC;gbkey=Gene;gene=parC;gene_biotype=pseudogene;locus_tag=PKHYL_RS14565;old_locus_tag=PKHYL_35450;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2726320	2728628	.	+	0	ID=cds-PKHYL_RS14565;Parent=gene-PKHYL_RS14565;Note=frameshifted;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201688.1;locus_tag=PKHYL_RS14565;product=DNA topoisomerase IV subunit A;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2730471	2730752	.	-	.	ID=gene-PKHYL_RS14570;Name=PKHYL_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14570;old_locus_tag=PKHYL_35500
NZ_AP019516.1	GeneMarkS-2+	CDS	2730471	2730752	.	-	0	ID=cds-WP_240365468.1;Parent=gene-PKHYL_RS14570;Dbxref=Genbank:WP_240365468.1;Name=WP_240365468.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14570;product=hypothetical protein;protein_id=WP_240365468.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2731110	2731481	.	-	.	ID=gene-PKHYL_RS14575;Name=PKHYL_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14575
NZ_AP019516.1	Protein Homology	CDS	2731110	2731481	.	-	0	ID=cds-WP_240366550.1;Parent=gene-PKHYL_RS14575;Dbxref=Genbank:WP_240366550.1;Name=WP_240366550.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013936.2;locus_tag=PKHYL_RS14575;product=hemerythrin domain-containing protein;protein_id=WP_240366550.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2731526	2731702	.	-	.	ID=gene-PKHYL_RS14580;Name=PKHYL_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14580;old_locus_tag=PKHYL_35520
NZ_AP019516.1	GeneMarkS-2+	CDS	2731526	2731702	.	-	0	ID=cds-WP_240365469.1;Parent=gene-PKHYL_RS14580;Dbxref=Genbank:WP_240365469.1;Name=WP_240365469.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14580;product=hypothetical protein;protein_id=WP_240365469.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2732129	2732932	.	+	.	ID=gene-PKHYL_RS14585;Name=PKHYL_RS14585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14585;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2732129	2732932	.	+	0	ID=cds-PKHYL_RS14585;Parent=gene-PKHYL_RS14585;Note=frameshifted;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444303.1;locus_tag=PKHYL_RS14585;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2732973	2733119	.	-	.	ID=gene-PKHYL_RS14590;Name=PKHYL_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14590
NZ_AP019516.1	Protein Homology	CDS	2732973	2733119	.	-	0	ID=cds-WP_240365470.1;Parent=gene-PKHYL_RS14590;Dbxref=Genbank:WP_240365470.1;Name=WP_240365470.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=PKHYL_RS14590;product=SDR family oxidoreductase;protein_id=WP_240365470.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2733058	2733786	.	-	.	ID=gene-PKHYL_RS14595;Name=PKHYL_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14595;old_locus_tag=PKHYL_35550
NZ_AP019516.1	Protein Homology	CDS	2733058	2733786	.	-	0	ID=cds-WP_240365471.1;Parent=gene-PKHYL_RS14595;Dbxref=Genbank:WP_240365471.1;Name=WP_240365471.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=PKHYL_RS14595;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_240365471.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2734145	2734294	.	+	.	ID=gene-PKHYL_RS14600;Name=PKHYL_RS14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14600
NZ_AP019516.1	GeneMarkS-2+	CDS	2734145	2734294	.	+	0	ID=cds-WP_240365472.1;Parent=gene-PKHYL_RS14600;Dbxref=Genbank:WP_240365472.1;Name=WP_240365472.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14600;product=hypothetical protein;protein_id=WP_240365472.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2734272	2735270	.	+	.	ID=gene-PKHYL_RS14605;Name=PKHYL_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14605;old_locus_tag=PKHYL_35560
NZ_AP019516.1	Protein Homology	CDS	2734272	2735270	.	+	0	ID=cds-WP_240365473.1;Parent=gene-PKHYL_RS14605;Dbxref=Genbank:WP_240365473.1;Name=WP_240365473.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024808.2;locus_tag=PKHYL_RS14605;product=extracellular solute-binding protein;protein_id=WP_240365473.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2735402	2735830	.	-	.	ID=gene-PKHYL_RS14610;Name=PKHYL_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14610;old_locus_tag=PKHYL_35570
NZ_AP019516.1	GeneMarkS-2+	CDS	2735402	2735830	.	-	0	ID=cds-WP_240365474.1;Parent=gene-PKHYL_RS14610;Dbxref=Genbank:WP_240365474.1;Name=WP_240365474.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14610;product=hypothetical protein;protein_id=WP_240365474.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2735799	2736566	.	-	.	ID=gene-PKHYL_RS14615;Name=PKHYL_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14615;old_locus_tag=PKHYL_35580
NZ_AP019516.1	Protein Homology	CDS	2735799	2736566	.	-	0	ID=cds-WP_240365475.1;Parent=gene-PKHYL_RS14615;Dbxref=Genbank:WP_240365475.1;Name=WP_240365475.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016513.2;locus_tag=PKHYL_RS14615;product=FUSC family protein;protein_id=WP_240365475.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2736772	2738192	.	-	.	ID=gene-PKHYL_RS14620;Name=PKHYL_RS14620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14620;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2736772	2738192	.	-	0	ID=cds-PKHYL_RS14620;Parent=gene-PKHYL_RS14620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996920.1;locus_tag=PKHYL_RS14620;product=glutamate synthase subunit beta;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2738424	2742889	.	-	.	ID=gene-PKHYL_RS14625;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=pseudogene;locus_tag=PKHYL_RS14625;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2738424	2742889	.	-	0	ID=cds-PKHYL_RS14625;Parent=gene-PKHYL_RS14625;Note=frameshifted;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444309.1;locus_tag=PKHYL_RS14625;product=glutamate synthase large subunit;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2743770	2744873	.	-	.	ID=gene-PKHYL_RS14630;Name=PKHYL_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14630;old_locus_tag=PKHYL_35650
NZ_AP019516.1	Protein Homology	CDS	2743770	2744873	.	-	0	ID=cds-WP_240365476.1;Parent=gene-PKHYL_RS14630;Dbxref=Genbank:WP_240365476.1;Name=WP_240365476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514479.1;locus_tag=PKHYL_RS14630;product=hypothetical protein;protein_id=WP_240365476.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2745009	2746120	.	-	.	ID=gene-PKHYL_RS14635;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=pseudogene;locus_tag=PKHYL_RS14635;old_locus_tag=PKHYL_35670;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2745009	2746120	.	-	0	ID=cds-PKHYL_RS14635;Parent=gene-PKHYL_RS14635;Note=frameshifted;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201703.1;locus_tag=PKHYL_RS14635;product=3-dehydroquinate synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2746240	2746757	.	-	.	ID=gene-PKHYL_RS14640;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=pseudogene;locus_tag=PKHYL_RS14640;partial=true;pseudo=true;start_range=.,2746240
NZ_AP019516.1	Protein Homology	CDS	2746240	2746757	.	-	0	ID=cds-PKHYL_RS14640;Parent=gene-PKHYL_RS14640;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514481.1;locus_tag=PKHYL_RS14640;partial=true;product=shikimate kinase AroK;pseudo=true;start_range=.,2746240;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2746963	2749337	.	-	.	ID=gene-PKHYL_RS14645;Name=pilQ;gbkey=Gene;gene=pilQ;gene_biotype=pseudogene;locus_tag=PKHYL_RS14645;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2746963	2749337	.	-	0	ID=cds-PKHYL_RS14645;Parent=gene-PKHYL_RS14645;Note=frameshifted;Ontology_term=GO:0009297,GO:0009306;gbkey=CDS;gene=pilQ;go_process=pilus assembly|0009297||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514482.1;locus_tag=PKHYL_RS14645;product=type IV pilus secretin PilQ;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2749365	2749898	.	-	.	ID=gene-PKHYL_RS14650;Name=PKHYL_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14650;old_locus_tag=PKHYL_35720
NZ_AP019516.1	Protein Homology	CDS	2749365	2749898	.	-	0	ID=cds-WP_058025948.1;Parent=gene-PKHYL_RS14650;Dbxref=Genbank:WP_058025948.1;Name=WP_058025948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514483.1;locus_tag=PKHYL_RS14650;product=pilus assembly protein PilP;protein_id=WP_058025948.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2749898	2750308	.	-	.	ID=gene-PKHYL_RS14655;Name=pilO;gbkey=Gene;gene=pilO;gene_biotype=protein_coding;locus_tag=PKHYL_RS14655;old_locus_tag=PKHYL_35730
NZ_AP019516.1	Protein Homology	CDS	2749898	2750308	.	-	0	ID=cds-WP_240365477.1;Parent=gene-PKHYL_RS14655;Dbxref=Genbank:WP_240365477.1;Name=WP_240365477.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;gene=pilO;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: protein motif:HMM:NF016253.2;locus_tag=PKHYL_RS14655;product=type 4a pilus biogenesis protein PilO;protein_id=WP_240365477.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2750281	2751279	.	-	.	ID=gene-PKHYL_RS14660;Name=PKHYL_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14660;old_locus_tag=PKHYL_35740
NZ_AP019516.1	Protein Homology	CDS	2750281	2751279	.	-	0	ID=cds-WP_240365478.1;Parent=gene-PKHYL_RS14660;Dbxref=Genbank:WP_240365478.1;Name=WP_240365478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019519175.1;locus_tag=PKHYL_RS14660;product=PilN domain-containing protein;protein_id=WP_240365478.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2751279	2752304	.	-	.	ID=gene-PKHYL_RS14665;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=PKHYL_RS14665;old_locus_tag=PKHYL_35750
NZ_AP019516.1	Protein Homology	CDS	2751279	2752304	.	-	0	ID=cds-WP_240365479.1;Parent=gene-PKHYL_RS14665;Dbxref=Genbank:WP_240365479.1;Name=WP_240365479.1;Ontology_term=GO:0009297;gbkey=CDS;gene=pilM;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812410.1;locus_tag=PKHYL_RS14665;product=type IV pilus assembly protein PilM;protein_id=WP_240365479.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2752512	2755173	.	+	.	ID=gene-PKHYL_RS14670;Name=PKHYL_RS14670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14670;old_locus_tag=PKHYL_35770;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2752512	2755173	.	+	0	ID=cds-PKHYL_RS14670;Parent=gene-PKHYL_RS14670;Note=frameshifted;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444317.1;locus_tag=PKHYL_RS14670;product=PBP1A family penicillin-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2755275	2755799	.	-	.	ID=gene-PKHYL_RS14675;Name=PKHYL_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14675;old_locus_tag=PKHYL_35780
NZ_AP019516.1	Protein Homology	CDS	2755275	2755799	.	-	0	ID=cds-WP_071002926.1;Parent=gene-PKHYL_RS14675;Dbxref=Genbank:WP_071002926.1;Name=WP_071002926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514488.1;locus_tag=PKHYL_RS14675;product=hypothetical protein;protein_id=WP_071002926.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2755968	2760183	.	-	.	ID=gene-PKHYL_RS14680;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=pseudogene;locus_tag=PKHYL_RS14680;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2755968	2760183	.	-	0	ID=cds-PKHYL_RS14680;Parent=gene-PKHYL_RS14680;Note=frameshifted;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201712.1;locus_tag=PKHYL_RS14680;product=DNA-directed RNA polymerase subunit beta';pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2760335	2764452	.	-	.	ID=gene-PKHYL_RS14685;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=pseudogene;locus_tag=PKHYL_RS14685;old_locus_tag=PKHYL_35860;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2760335	2764452	.	-	0	ID=cds-PKHYL_RS14685;Parent=gene-PKHYL_RS14685;Note=frameshifted;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004729307.1;locus_tag=PKHYL_RS14685;product=DNA-directed RNA polymerase subunit beta;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2765213	2765591	.	-	.	ID=gene-PKHYL_RS14690;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=pseudogene;locus_tag=PKHYL_RS14690;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2765213	2765591	.	-	0	ID=cds-PKHYL_RS14690;Parent=gene-PKHYL_RS14690;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599214.1;locus_tag=PKHYL_RS14690;product=50S ribosomal protein L7/L12;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2765712	2766239	.	-	.	ID=gene-PKHYL_RS14695;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=PKHYL_RS14695;old_locus_tag=PKHYL_35870
NZ_AP019516.1	Protein Homology	CDS	2765712	2766239	.	-	0	ID=cds-WP_071002922.1;Parent=gene-PKHYL_RS14695;Dbxref=Genbank:WP_071002922.1;Name=WP_071002922.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=PKHYL_RS14695;product=50S ribosomal protein L10;protein_id=WP_071002922.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2766714	2767415	.	-	.	ID=gene-PKHYL_RS14700;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=PKHYL_RS14700;old_locus_tag=PKHYL_35880
NZ_AP019516.1	Protein Homology	CDS	2766714	2767415	.	-	0	ID=cds-WP_071002921.1;Parent=gene-PKHYL_RS14700;Dbxref=Genbank:WP_071002921.1;Name=WP_071002921.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003656500.1;locus_tag=PKHYL_RS14700;product=50S ribosomal protein L1;protein_id=WP_071002921.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2767415	2767846	.	-	.	ID=gene-PKHYL_RS14705;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=PKHYL_RS14705;old_locus_tag=PKHYL_35890
NZ_AP019516.1	Protein Homology	CDS	2767415	2767846	.	-	0	ID=cds-WP_071002920.1;Parent=gene-PKHYL_RS14705;Dbxref=Genbank:WP_071002920.1;Name=WP_071002920.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395730.1;locus_tag=PKHYL_RS14705;product=50S ribosomal protein L11;protein_id=WP_071002920.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2767942	2768472	.	-	.	ID=gene-PKHYL_RS14710;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=PKHYL_RS14710;old_locus_tag=PKHYL_35900
NZ_AP019516.1	Protein Homology	CDS	2767942	2768472	.	-	0	ID=cds-WP_071002919.1;Parent=gene-PKHYL_RS14710;Dbxref=Genbank:WP_071002919.1;Name=WP_071002919.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003658755.1;locus_tag=PKHYL_RS14710;product=transcription termination/antitermination protein NusG;protein_id=WP_071002919.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2768544	2769029	.	-	.	ID=gene-PKHYL_RS14715;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=PKHYL_RS14715;old_locus_tag=PKHYL_35910
NZ_AP019516.1	Protein Homology	CDS	2768544	2769029	.	-	0	ID=cds-WP_240365480.1;Parent=gene-PKHYL_RS14715;Dbxref=Genbank:WP_240365480.1;Name=WP_240365480.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444319.1;locus_tag=PKHYL_RS14715;product=preprotein translocase subunit SecE;protein_id=WP_240365480.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2769081	2769156	.	-	.	ID=gene-PKHYL_RS14720;Name=PKHYL_RS14720;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS14720;old_locus_tag=PKHYL_t00380
NZ_AP019516.1	tRNAscan-SE	tRNA	2769081	2769156	.	-	.	ID=rna-PKHYL_RS14720;Parent=gene-PKHYL_RS14720;anticodon=(pos:complement(2769121..2769123));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS14720;product=tRNA-Trp
NZ_AP019516.1	tRNAscan-SE	exon	2769081	2769156	.	-	.	ID=exon-PKHYL_RS14720-1;Parent=rna-PKHYL_RS14720;anticodon=(pos:complement(2769121..2769123));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS14720;product=tRNA-Trp
NZ_AP019516.1	RefSeq	pseudogene	2769525	2770714	.	-	.	ID=gene-PKHYL_RS14725;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=PKHYL_RS14725;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2769525	2770714	.	-	0	ID=cds-PKHYL_RS14725;Parent=gene-PKHYL_RS14725;Note=frameshifted;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961077.1;locus_tag=PKHYL_RS14725;product=elongation factor Tu;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2770936	2773061	.	-	.	ID=gene-PKHYL_RS14730;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=pseudogene;locus_tag=PKHYL_RS14730;old_locus_tag=PKHYL_35950;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2770936	2773061	.	-	0	ID=cds-PKHYL_RS14730;Parent=gene-PKHYL_RS14730;Note=frameshifted;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004994399.1;locus_tag=PKHYL_RS14730;product=elongation factor G;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2773413	2773887	.	-	.	ID=gene-PKHYL_RS14735;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=pseudogene;locus_tag=PKHYL_RS14735;old_locus_tag=PKHYL_35960;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2773413	2773887	.	-	0	ID=cds-PKHYL_RS14735;Parent=gene-PKHYL_RS14735;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=PKHYL_RS14735;product=30S ribosomal protein S7;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2774095	2774469	.	-	.	ID=gene-PKHYL_RS14740;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=PKHYL_RS14740;old_locus_tag=PKHYL_35970
NZ_AP019516.1	Protein Homology	CDS	2774095	2774469	.	-	0	ID=cds-WP_011281154.1;Parent=gene-PKHYL_RS14740;Dbxref=Genbank:WP_011281154.1;Name=WP_011281154.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281154.1;locus_tag=PKHYL_RS14740;product=30S ribosomal protein S12;protein_id=WP_011281154.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2774988	2775392	.	-	.	ID=gene-PKHYL_RS14745;Name=PKHYL_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14745;old_locus_tag=PKHYL_35980
NZ_AP019516.1	GeneMarkS-2+	CDS	2774988	2775392	.	-	0	ID=cds-WP_240365481.1;Parent=gene-PKHYL_RS14745;Dbxref=Genbank:WP_240365481.1;Name=WP_240365481.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14745;product=hypothetical protein;protein_id=WP_240365481.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2775687	2775965	.	-	.	ID=gene-PKHYL_RS14750;Name=PKHYL_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14750;old_locus_tag=PKHYL_35990
NZ_AP019516.1	GeneMarkS-2+	CDS	2775687	2775965	.	-	0	ID=cds-WP_240365482.1;Parent=gene-PKHYL_RS14750;Dbxref=Genbank:WP_240365482.1;Name=WP_240365482.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14750;product=hypothetical protein;protein_id=WP_240365482.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2776543	2777778	.	+	.	ID=gene-PKHYL_RS14755;Name=PKHYL_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14755;old_locus_tag=PKHYL_36000
NZ_AP019516.1	Protein Homology	CDS	2776543	2777778	.	+	0	ID=cds-WP_240365483.1;Parent=gene-PKHYL_RS14755;Dbxref=Genbank:WP_240365483.1;Name=WP_240365483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016142012.1;locus_tag=PKHYL_RS14755;product=beta-ketoacyl-ACP synthase II;protein_id=WP_240365483.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2777782	2779469	.	+	.	ID=gene-PKHYL_RS14760;Name=PKHYL_RS14760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14760;old_locus_tag=PKHYL_36010;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2777782	2779469	.	+	0	ID=cds-PKHYL_RS14760;Parent=gene-PKHYL_RS14760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281157.1;locus_tag=PKHYL_RS14760;product=anthranilate synthase component I family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2779585	2780718	.	-	.	ID=gene-PKHYL_RS14765;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=PKHYL_RS14765;old_locus_tag=PKHYL_36030
NZ_AP019516.1	Protein Homology	CDS	2779585	2780718	.	-	0	ID=cds-WP_240365484.1;Parent=gene-PKHYL_RS14765;Dbxref=Genbank:WP_240365484.1;Name=WP_240365484.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444323.1;locus_tag=PKHYL_RS14765;product=histidinol-phosphate transaminase;protein_id=WP_240365484.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2780795	2782089	.	-	.	ID=gene-PKHYL_RS14770;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=pseudogene;locus_tag=PKHYL_RS14770;old_locus_tag=PKHYL_36040;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2780795	2782089	.	-	0	ID=cds-PKHYL_RS14770;Parent=gene-PKHYL_RS14770;Note=frameshifted;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017387694.1;locus_tag=PKHYL_RS14770;product=histidinol dehydrogenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2782341	2783032	.	-	.	ID=gene-PKHYL_RS14775;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=pseudogene;locus_tag=PKHYL_RS14775;old_locus_tag=PKHYL_36060;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2782341	2783032	.	-	0	ID=cds-PKHYL_RS14775;Parent=gene-PKHYL_RS14775;Note=frameshifted;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200618.1;locus_tag=PKHYL_RS14775;product=ATP phosphoribosyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2783129	2784397	.	-	.	ID=gene-PKHYL_RS14780;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=PKHYL_RS14780;old_locus_tag=PKHYL_36080
NZ_AP019516.1	Protein Homology	CDS	2783129	2784397	.	-	0	ID=cds-WP_058025508.1;Parent=gene-PKHYL_RS14780;Dbxref=Genbank:WP_058025508.1;Name=WP_058025508.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019671709.1;locus_tag=PKHYL_RS14780;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_058025508.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2784509	2784760	.	-	.	ID=gene-PKHYL_RS14785;Name=PKHYL_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14785;old_locus_tag=PKHYL_36090
NZ_AP019516.1	Protein Homology	CDS	2784509	2784760	.	-	0	ID=cds-WP_058025509.1;Parent=gene-PKHYL_RS14785;Dbxref=Genbank:WP_058025509.1;Name=WP_058025509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514505.1;locus_tag=PKHYL_RS14785;product=BolA/IbaG family iron-sulfur metabolism protein;protein_id=WP_058025509.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2784925	2785107	.	-	.	ID=gene-PKHYL_RS14790;Name=PKHYL_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14790;old_locus_tag=PKHYL_36100
NZ_AP019516.1	GeneMarkS-2+	CDS	2784925	2785107	.	-	0	ID=cds-WP_240365485.1;Parent=gene-PKHYL_RS14790;Dbxref=Genbank:WP_240365485.1;Name=WP_240365485.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14790;product=hypothetical protein;protein_id=WP_240365485.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2785080	2785913	.	-	.	ID=gene-PKHYL_RS14795;Name=PKHYL_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14795;old_locus_tag=PKHYL_36110
NZ_AP019516.1	Protein Homology	CDS	2785080	2785913	.	-	0	ID=cds-WP_240365486.1;Parent=gene-PKHYL_RS14795;Dbxref=Genbank:WP_240365486.1;Name=WP_240365486.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018880.2;locus_tag=PKHYL_RS14795;product=alpha/beta hydrolase;protein_id=WP_240365486.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2786257	2786541	.	-	.	ID=gene-PKHYL_RS14800;Name=PKHYL_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14800;old_locus_tag=PKHYL_36120
NZ_AP019516.1	GeneMarkS-2+	CDS	2786257	2786541	.	-	0	ID=cds-WP_240365487.1;Parent=gene-PKHYL_RS14800;Dbxref=Genbank:WP_240365487.1;Name=WP_240365487.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14800;product=hypothetical protein;protein_id=WP_240365487.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2786510	2787043	.	-	.	ID=gene-PKHYL_RS14805;Name=PKHYL_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14805;old_locus_tag=PKHYL_36130
NZ_AP019516.1	Protein Homology	CDS	2786510	2787043	.	-	0	ID=cds-WP_240365488.1;Parent=gene-PKHYL_RS14805;Dbxref=Genbank:WP_240365488.1;Name=WP_240365488.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016836.2;locus_tag=PKHYL_RS14805;product=BON domain-containing protein;protein_id=WP_240365488.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2787261	2787746	.	-	.	ID=gene-PKHYL_RS14810;Name=PKHYL_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14810;old_locus_tag=PKHYL_36140
NZ_AP019516.1	Protein Homology	CDS	2787261	2787746	.	-	0	ID=cds-WP_240365489.1;Parent=gene-PKHYL_RS14810;Dbxref=Genbank:WP_240365489.1;Name=WP_240365489.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281165.1;locus_tag=PKHYL_RS14810;product=YraN family protein;protein_id=WP_240365489.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2787896	2788833	.	+	.	ID=gene-PKHYL_RS14815;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=pseudogene;locus_tag=PKHYL_RS14815;old_locus_tag=PKHYL_36160;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2787896	2788833	.	+	0	ID=cds-PKHYL_RS14815;Parent=gene-PKHYL_RS14815;Note=frameshifted;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200629.1;locus_tag=PKHYL_RS14815;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2788888	2789907	.	+	.	ID=gene-PKHYL_RS14820;Name=PKHYL_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14820;old_locus_tag=PKHYL_36170
NZ_AP019516.1	Protein Homology	CDS	2788888	2789907	.	+	0	ID=cds-WP_071002907.1;Parent=gene-PKHYL_RS14820;Dbxref=Genbank:WP_071002907.1;Name=WP_071002907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444331.1;locus_tag=PKHYL_RS14820;product=adenosine kinase;protein_id=WP_071002907.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2790300	2791608	.	-	.	ID=gene-PKHYL_RS14825;Name=PKHYL_RS14825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14825;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2790300	2791608	.	-	0	ID=cds-PKHYL_RS14825;Parent=gene-PKHYL_RS14825;Note=frameshifted;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514511.1;locus_tag=PKHYL_RS14825;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2791839	2792501	.	-	.	ID=gene-PKHYL_RS14830;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=PKHYL_RS14830;old_locus_tag=PKHYL_36210
NZ_AP019516.1	Protein Homology	CDS	2791839	2792501	.	-	0	ID=cds-WP_058025134.1;Parent=gene-PKHYL_RS14830;Dbxref=Genbank:WP_058025134.1;Name=WP_058025134.1;Ontology_term=GO:0016226,GO:0003674;gbkey=CDS;gene=nfuA;go_function=molecular_function|0003674||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200634.1;locus_tag=PKHYL_RS14830;product=Fe-S biogenesis protein NfuA;protein_id=WP_058025134.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2793415	2793834	.	+	.	ID=gene-PKHYL_RS14835;Name=PKHYL_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14835;old_locus_tag=PKHYL_36230
NZ_AP019516.1	Protein Homology	CDS	2793415	2793834	.	+	0	ID=cds-WP_240365372.1-5;Parent=gene-PKHYL_RS14835;Dbxref=Genbank:WP_240365372.1;Name=WP_240365372.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025000.2;locus_tag=PKHYL_RS14835;product=transposase family protein;protein_id=WP_240365372.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2793794	2794246	.	+	.	ID=gene-PKHYL_RS14840;Name=PKHYL_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14840;old_locus_tag=PKHYL_36240
NZ_AP019516.1	Protein Homology	CDS	2793794	2794246	.	+	0	ID=cds-WP_240365373.1-4;Parent=gene-PKHYL_RS14840;Dbxref=Genbank:WP_240365373.1;Name=WP_240365373.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF024752.2;locus_tag=PKHYL_RS14840;product=transposase;protein_id=WP_240365373.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2794454	2795522	.	+	.	ID=gene-PKHYL_RS14845;Name=PKHYL_RS14845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14845;old_locus_tag=PKHYL_36250;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2794454	2795522	.	+	0	ID=cds-PKHYL_RS14845;Parent=gene-PKHYL_RS14845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444335.1;locus_tag=PKHYL_RS14845;product=bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2795691	2796308	.	+	.	ID=gene-PKHYL_RS14850;Name=PKHYL_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14850;old_locus_tag=PKHYL_36270
NZ_AP019516.1	Protein Homology	CDS	2795691	2796308	.	+	0	ID=cds-WP_240365490.1;Parent=gene-PKHYL_RS14850;Dbxref=Genbank:WP_240365490.1;Name=WP_240365490.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037045.2;locus_tag=PKHYL_RS14850;product=nicotinamide phosphoribosyltransferase domain-containing protein;protein_id=WP_240365490.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2796233	2796994	.	+	.	ID=gene-PKHYL_RS14855;Name=PKHYL_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14855;old_locus_tag=PKHYL_36280
NZ_AP019516.1	Protein Homology	CDS	2796233	2796994	.	+	0	ID=cds-WP_240365491.1;Parent=gene-PKHYL_RS14855;Dbxref=Genbank:WP_240365491.1;Name=WP_240365491.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016021.2;locus_tag=PKHYL_RS14855;product=hypothetical protein;protein_id=WP_240365491.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2797082	2797474	.	+	.	ID=gene-PKHYL_RS14860;Name=PKHYL_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14860;old_locus_tag=PKHYL_36290
NZ_AP019516.1	GeneMarkS-2+	CDS	2797082	2797474	.	+	0	ID=cds-WP_240365492.1;Parent=gene-PKHYL_RS14860;Dbxref=Genbank:WP_240365492.1;Name=WP_240365492.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14860;product=hypothetical protein;protein_id=WP_240365492.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2797455	2797925	.	+	.	ID=gene-PKHYL_RS14865;Name=PKHYL_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14865;old_locus_tag=PKHYL_36300
NZ_AP019516.1	Protein Homology	CDS	2797455	2797925	.	+	0	ID=cds-WP_240365493.1;Parent=gene-PKHYL_RS14865;Dbxref=Genbank:WP_240365493.1;Name=WP_240365493.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012863.2;locus_tag=PKHYL_RS14865;product=SGNH/GDSL hydrolase family protein;protein_id=WP_240365493.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2798022	2798300	.	-	.	ID=gene-PKHYL_RS14870;Name=PKHYL_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14870;old_locus_tag=PKHYL_36310
NZ_AP019516.1	Protein Homology	CDS	2798022	2798300	.	-	0	ID=cds-WP_075107333.1;Parent=gene-PKHYL_RS14870;Dbxref=Genbank:WP_075107333.1;Name=WP_075107333.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514517.1;locus_tag=PKHYL_RS14870;product=type B 50S ribosomal protein L31;protein_id=WP_075107333.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2798800	2799405	.	+	.	ID=gene-PKHYL_RS14875;Name=PKHYL_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14875;old_locus_tag=PKHYL_36320
NZ_AP019516.1	Protein Homology	CDS	2798800	2799405	.	+	0	ID=cds-WP_240365494.1;Parent=gene-PKHYL_RS14875;Dbxref=Genbank:WP_240365494.1;Name=WP_240365494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200642.1;locus_tag=PKHYL_RS14875;product=YceI family protein;protein_id=WP_240365494.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2799502	2799783	.	-	.	ID=gene-PKHYL_RS14880;Name=PKHYL_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14880;old_locus_tag=PKHYL_36330
NZ_AP019516.1	Protein Homology	CDS	2799502	2799783	.	-	0	ID=cds-WP_240365495.1;Parent=gene-PKHYL_RS14880;Dbxref=Genbank:WP_240365495.1;Name=WP_240365495.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015596.2;locus_tag=PKHYL_RS14880;product=hypothetical protein;protein_id=WP_240365495.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2799773	2799934	.	-	.	ID=gene-PKHYL_RS14885;Name=PKHYL_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14885
NZ_AP019516.1	GeneMarkS-2+	CDS	2799773	2799934	.	-	0	ID=cds-WP_240365496.1;Parent=gene-PKHYL_RS14885;Dbxref=Genbank:WP_240365496.1;Name=WP_240365496.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14885;product=hypothetical protein;protein_id=WP_240365496.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2800466	2801668	.	+	.	ID=gene-PKHYL_RS14890;Name=PKHYL_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14890;old_locus_tag=PKHYL_36350
NZ_AP019516.1	GeneMarkS-2+	CDS	2800466	2801668	.	+	0	ID=cds-WP_240365497.1;Parent=gene-PKHYL_RS14890;Dbxref=Genbank:WP_240365497.1;Name=WP_240365497.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14890;product=hypothetical protein;protein_id=WP_240365497.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2801688	2802095	.	+	.	ID=gene-PKHYL_RS14895;Name=PKHYL_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14895;old_locus_tag=PKHYL_36360
NZ_AP019516.1	GeneMarkS-2+	CDS	2801688	2802095	.	+	0	ID=cds-WP_240365498.1;Parent=gene-PKHYL_RS14895;Dbxref=Genbank:WP_240365498.1;Name=WP_240365498.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14895;product=hypothetical protein;protein_id=WP_240365498.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2802230	2802820	.	-	.	ID=gene-PKHYL_RS14900;Name=PKHYL_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14900;old_locus_tag=PKHYL_36370
NZ_AP019516.1	Protein Homology	CDS	2802230	2802820	.	-	0	ID=cds-WP_240366551.1;Parent=gene-PKHYL_RS14900;Dbxref=Genbank:WP_240366551.1;Name=WP_240366551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200649.1;locus_tag=PKHYL_RS14900;product=TIGR00730 family Rossman fold protein;protein_id=WP_240366551.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2803218	2803754	.	+	.	ID=gene-PKHYL_RS14905;Name=PKHYL_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14905;old_locus_tag=PKHYL_36380
NZ_AP019516.1	Protein Homology	CDS	2803218	2803754	.	+	0	ID=cds-WP_240365499.1;Parent=gene-PKHYL_RS14905;Dbxref=Genbank:WP_240365499.1;Name=WP_240365499.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023568.2;locus_tag=PKHYL_RS14905;product=alpha/beta hydrolase;protein_id=WP_240365499.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2803738	2804184	.	+	.	ID=gene-PKHYL_RS14910;Name=PKHYL_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14910;old_locus_tag=PKHYL_36390
NZ_AP019516.1	GeneMarkS-2+	CDS	2803738	2804184	.	+	0	ID=cds-WP_240365500.1;Parent=gene-PKHYL_RS14910;Dbxref=Genbank:WP_240365500.1;Name=WP_240365500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14910;product=hypothetical protein;protein_id=WP_240365500.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2804270	2804803	.	-	.	ID=gene-PKHYL_RS14915;Name=PKHYL_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14915;old_locus_tag=PKHYL_36400
NZ_AP019516.1	Protein Homology	CDS	2804270	2804803	.	-	0	ID=cds-WP_240365501.1;Parent=gene-PKHYL_RS14915;Dbxref=Genbank:WP_240365501.1;Name=WP_240365501.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024251.2;locus_tag=PKHYL_RS14915;product=DUF3820 family protein;protein_id=WP_240365501.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2804787	2804999	.	-	.	ID=gene-PKHYL_RS14920;Name=PKHYL_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14920;old_locus_tag=PKHYL_36410
NZ_AP019516.1	GeneMarkS-2+	CDS	2804787	2804999	.	-	0	ID=cds-WP_240365502.1;Parent=gene-PKHYL_RS14920;Dbxref=Genbank:WP_240365502.1;Name=WP_240365502.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14920;product=hypothetical protein;protein_id=WP_240365502.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2805196	2805786	.	+	.	ID=gene-PKHYL_RS14925;Name=PKHYL_RS14925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14925;old_locus_tag=PKHYL_36420;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2805196	2805786	.	+	0	ID=cds-PKHYL_RS14925;Parent=gene-PKHYL_RS14925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200652.1;locus_tag=PKHYL_RS14925;product=M23 family metallopeptidase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2805854	2806969	.	-	.	ID=gene-PKHYL_RS14930;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=PKHYL_RS14930;old_locus_tag=PKHYL_36430
NZ_AP019516.1	Protein Homology	CDS	2805854	2806969	.	-	0	ID=cds-WP_093070394.1;Parent=gene-PKHYL_RS14930;Dbxref=Genbank:WP_093070394.1;Name=WP_093070394.1;Ontology_term=GO:0000160,GO:0006796,GO:0000155;gbkey=CDS;gene=phoR;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444345.1;locus_tag=PKHYL_RS14930;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_093070394.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2807062	2807766	.	-	.	ID=gene-PKHYL_RS14935;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=PKHYL_RS14935;old_locus_tag=PKHYL_36440
NZ_AP019516.1	Protein Homology	CDS	2807062	2807766	.	-	0	ID=cds-WP_058025125.1;Parent=gene-PKHYL_RS14935;Dbxref=Genbank:WP_058025125.1;Name=WP_058025125.1;Ontology_term=GO:0000160,GO:0006355,GO:0006796,GO:0000156,GO:0003700;gbkey=CDS;gene=phoB;go_function=phosphorelay response regulator activity|0000156||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200659.1;locus_tag=PKHYL_RS14935;product=phosphate regulon transcriptional regulator PhoB;protein_id=WP_058025125.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2807879	2808332	.	-	.	ID=gene-PKHYL_RS14940;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=pseudogene;locus_tag=PKHYL_RS14940;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2807879	2808332	.	-	0	ID=cds-PKHYL_RS14940;Parent=gene-PKHYL_RS14940;Note=frameshifted;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003663421.1;locus_tag=PKHYL_RS14940;product=D-aminoacyl-tRNA deacylase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2808462	2809295	.	+	.	ID=gene-PKHYL_RS14945;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=PKHYL_RS14945;old_locus_tag=PKHYL_36470
NZ_AP019516.1	Protein Homology	CDS	2808462	2809295	.	+	0	ID=cds-WP_071002894.1;Parent=gene-PKHYL_RS14945;Dbxref=Genbank:WP_071002894.1;Name=WP_071002894.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520297.1;locus_tag=PKHYL_RS14945;product=archaetidylserine decarboxylase;protein_id=WP_071002894.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2809388	2810017	.	-	.	ID=gene-PKHYL_RS14950;Name=PKHYL_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14950;old_locus_tag=PKHYL_36480
NZ_AP019516.1	Protein Homology	CDS	2809388	2810017	.	-	0	ID=cds-WP_071002893.1;Parent=gene-PKHYL_RS14950;Dbxref=Genbank:WP_071002893.1;Name=WP_071002893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200665.1;locus_tag=PKHYL_RS14950;product=HD domain-containing protein;protein_id=WP_071002893.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2810148	2810723	.	-	.	ID=gene-PKHYL_RS14955;Name=PKHYL_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14955;old_locus_tag=PKHYL_36490
NZ_AP019516.1	Protein Homology	CDS	2810148	2810723	.	-	0	ID=cds-WP_058025121.1;Parent=gene-PKHYL_RS14955;Dbxref=Genbank:WP_058025121.1;Name=WP_058025121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200667.1;locus_tag=PKHYL_RS14955;product=isochorismatase family protein;protein_id=WP_058025121.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2811008	2812180	.	-	.	ID=gene-PKHYL_RS14960;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=PKHYL_RS14960;old_locus_tag=PKHYL_36500
NZ_AP019516.1	Protein Homology	CDS	2811008	2812180	.	-	0	ID=cds-WP_071002892.1;Parent=gene-PKHYL_RS14960;Dbxref=Genbank:WP_071002892.1;Name=WP_071002892.1;Ontology_term=GO:0006631,GO:0003988;gbkey=CDS;gene=fadA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000212712.1;locus_tag=PKHYL_RS14960;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_071002892.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2812414	2814569	.	-	.	ID=gene-PKHYL_RS14965;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=pseudogene;locus_tag=PKHYL_RS14965;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2812414	2814569	.	-	0	ID=cds-PKHYL_RS14965;Parent=gene-PKHYL_RS14965;Note=frameshifted;Ontology_term=GO:0006631,GO:0016491,GO:0070403;gbkey=CDS;gene=fadB;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281191.1;locus_tag=PKHYL_RS14965;product=fatty acid oxidation complex subunit alpha FadB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2815376	2816437	.	+	.	ID=gene-PKHYL_RS14970;Name=PKHYL_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14970;old_locus_tag=PKHYL_36540
NZ_AP019516.1	Protein Homology	CDS	2815376	2816437	.	+	0	ID=cds-WP_093070404.1;Parent=gene-PKHYL_RS14970;Dbxref=Genbank:WP_093070404.1;Name=WP_093070404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444350.1;locus_tag=PKHYL_RS14970;product=polyprenyl synthetase family protein;protein_id=WP_093070404.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2816508	2817254	.	+	.	ID=gene-PKHYL_RS14975;Name=PKHYL_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14975;old_locus_tag=PKHYL_36550
NZ_AP019516.1	Protein Homology	CDS	2816508	2817254	.	+	0	ID=cds-WP_240365503.1;Parent=gene-PKHYL_RS14975;Dbxref=Genbank:WP_240365503.1;Name=WP_240365503.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014017.2;locus_tag=PKHYL_RS14975;product=DUF72 domain-containing protein;protein_id=WP_240365503.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2817390	2817971	.	+	.	ID=gene-PKHYL_RS14980;Name=PKHYL_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS14980;old_locus_tag=PKHYL_36560
NZ_AP019516.1	GeneMarkS-2+	CDS	2817390	2817971	.	+	0	ID=cds-WP_240365504.1;Parent=gene-PKHYL_RS14980;Dbxref=Genbank:WP_240365504.1;Name=WP_240365504.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS14980;product=hypothetical protein;protein_id=WP_240365504.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2818069	2818699	.	-	.	ID=gene-PKHYL_RS14985;Name=PKHYL_RS14985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS14985;old_locus_tag=PKHYL_36570;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2818069	2818699	.	-	0	ID=cds-PKHYL_RS14985;Parent=gene-PKHYL_RS14985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004695759.1;locus_tag=PKHYL_RS14985;product=superoxide dismutase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2819227	2819880	.	+	.	ID=gene-PKHYL_RS14990;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=PKHYL_RS14990;old_locus_tag=PKHYL_36580
NZ_AP019516.1	Protein Homology	CDS	2819227	2819880	.	+	0	ID=cds-WP_071002886.1;Parent=gene-PKHYL_RS14990;Dbxref=Genbank:WP_071002886.1;Name=WP_071002886.1;Ontology_term=GO:0006281,GO:0016462;gbkey=CDS;gene=rdgB;go_function=pyrophosphatase activity|0016462||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444353.1;locus_tag=PKHYL_RS14990;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_071002886.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2820319	2821660	.	+	.	ID=gene-PKHYL_RS14995;Name=tig;gbkey=Gene;gene=tig;gene_biotype=pseudogene;locus_tag=PKHYL_RS14995;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2820319	2821660	.	+	0	ID=cds-PKHYL_RS14995;Parent=gene-PKHYL_RS14995;Note=frameshifted%3B internal stop;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514543.1;locus_tag=PKHYL_RS14995;product=trigger factor;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2821863	2822090	.	-	.	ID=gene-PKHYL_RS15000;Name=PKHYL_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15000;old_locus_tag=PKHYL_36610
NZ_AP019516.1	Protein Homology	CDS	2821863	2822090	.	-	0	ID=cds-WP_240365505.1;Parent=gene-PKHYL_RS15000;Dbxref=Genbank:WP_240365505.1;Name=WP_240365505.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016819.2;locus_tag=PKHYL_RS15000;product=HupE/UreJ family protein;protein_id=WP_240365505.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2822056	2822616	.	-	.	ID=gene-PKHYL_RS15005;Name=PKHYL_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15005;old_locus_tag=PKHYL_36620
NZ_AP019516.1	Protein Homology	CDS	2822056	2822616	.	-	0	ID=cds-WP_240365506.1;Parent=gene-PKHYL_RS15005;Dbxref=Genbank:WP_240365506.1;Name=WP_240365506.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016819.2;locus_tag=PKHYL_RS15005;product=HupE/UreJ family protein;protein_id=WP_240365506.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2822668	2823357	.	-	.	ID=gene-PKHYL_RS15010;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=PKHYL_RS15010;old_locus_tag=PKHYL_36630
NZ_AP019516.1	Protein Homology	CDS	2822668	2823357	.	-	0	ID=cds-WP_083328925.1;Parent=gene-PKHYL_RS15010;Dbxref=Genbank:WP_083328925.1;Name=WP_083328925.1;Ontology_term=GO:0019627,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011513324.1;locus_tag=PKHYL_RS15010;product=urease accessory protein UreG;protein_id=WP_083328925.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2823436	2824149	.	-	.	ID=gene-PKHYL_RS15015;Name=PKHYL_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15015;old_locus_tag=PKHYL_36640
NZ_AP019516.1	Protein Homology	CDS	2823436	2824149	.	-	0	ID=cds-WP_240365507.1;Parent=gene-PKHYL_RS15015;Dbxref=Genbank:WP_240365507.1;Name=WP_240365507.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013858.2;locus_tag=PKHYL_RS15015;product=urease accessory protein UreF;protein_id=WP_240365507.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2824221	2824661	.	-	.	ID=gene-PKHYL_RS15020;Name=PKHYL_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15020;old_locus_tag=PKHYL_36650
NZ_AP019516.1	Protein Homology	CDS	2824221	2824661	.	-	0	ID=cds-WP_240365508.1;Parent=gene-PKHYL_RS15020;Dbxref=Genbank:WP_240365508.1;Name=WP_240365508.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017045.2;locus_tag=PKHYL_RS15020;product=urease accessory protein UreE;protein_id=WP_240365508.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2825031	2827206	.	-	.	ID=gene-PKHYL_RS15025;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=pseudogene;locus_tag=PKHYL_RS15025;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2825031	2827206	.	-	0	ID=cds-PKHYL_RS15025;Parent=gene-PKHYL_RS15025;Note=frameshifted;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394073.1;locus_tag=PKHYL_RS15025;product=urease subunit alpha;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2827251	2827553	.	-	.	ID=gene-PKHYL_RS15030;Name=ureA;gbkey=Gene;gene=ureA;gene_biotype=protein_coding;locus_tag=PKHYL_RS15030;old_locus_tag=PKHYL_36680
NZ_AP019516.1	Protein Homology	CDS	2827251	2827553	.	-	0	ID=cds-WP_057761815.1;Parent=gene-PKHYL_RS15030;Dbxref=Genbank:WP_057761815.1;Name=WP_057761815.1;Ontology_term=GO:0019627,GO:0009039;gbkey=CDS;gene=ureA;go_function=urease activity|0009039||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000422460.1;locus_tag=PKHYL_RS15030;product=urease subunit gamma;protein_id=WP_057761815.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2827633	2828655	.	-	.	ID=gene-PKHYL_RS15035;Name=PKHYL_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15035;old_locus_tag=PKHYL_36690
NZ_AP019516.1	Protein Homology	CDS	2827633	2828655	.	-	0	ID=cds-WP_240365509.1;Parent=gene-PKHYL_RS15035;Dbxref=Genbank:WP_240365509.1;Name=WP_240365509.1;Ontology_term=GO:0006807,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041753046.1;locus_tag=PKHYL_RS15035;product=urease accessory protein UreD;protein_id=WP_240365509.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2829458	2830082	.	+	.	ID=gene-PKHYL_RS15040;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=pseudogene;locus_tag=PKHYL_RS15040;old_locus_tag=PKHYL_36710;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2829458	2830082	.	+	0	ID=cds-PKHYL_RS15040;Parent=gene-PKHYL_RS15040;Note=frameshifted;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281198.1;locus_tag=PKHYL_RS15040;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2830269	2831539	.	+	.	ID=gene-PKHYL_RS15045;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=pseudogene;locus_tag=PKHYL_RS15045;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2830269	2831539	.	+	0	ID=cds-PKHYL_RS15045;Parent=gene-PKHYL_RS15045;Note=frameshifted;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0051082,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281199.1;locus_tag=PKHYL_RS15045;product=ATP-dependent protease ATP-binding subunit ClpX;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2832017	2832911	.	+	.	ID=gene-PKHYL_RS15050;Name=PKHYL_RS15050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15050;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2832017	2832911	.	+	0	ID=cds-PKHYL_RS15050;Parent=gene-PKHYL_RS15050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870108.1;locus_tag=PKHYL_RS15050;product=SDR family NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2833005	2834014	.	-	.	ID=gene-PKHYL_RS15055;Name=PKHYL_RS15055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15055;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2833005	2834014	.	-	0	ID=cds-PKHYL_RS15055;Parent=gene-PKHYL_RS15055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024699.2;locus_tag=PKHYL_RS15055;product=PTS sugar transporter subunit IIC;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2834247	2835051	.	-	.	ID=gene-PKHYL_RS15060;Name=PKHYL_RS15060;end_range=2835051,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15060;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2834247	2835051	.	-	0	ID=cds-PKHYL_RS15060;Parent=gene-PKHYL_RS15060;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0042834;end_range=2835051,.;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444357.1;locus_tag=PKHYL_RS15060;partial=true;product=SPOR domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2835149	2836977	.	-	.	ID=gene-PKHYL_RS15065;Name=argS;gbkey=Gene;gene=argS;gene_biotype=pseudogene;locus_tag=PKHYL_RS15065;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2835149	2836977	.	-	0	ID=cds-PKHYL_RS15065;Parent=gene-PKHYL_RS15065;Note=frameshifted;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281203.1;locus_tag=PKHYL_RS15065;product=arginine--tRNA ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2837419	2837637	.	+	.	ID=gene-PKHYL_RS15070;Name=PKHYL_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15070;old_locus_tag=PKHYL_36840
NZ_AP019516.1	Protein Homology	CDS	2837419	2837637	.	+	0	ID=cds-WP_071002875.1;Parent=gene-PKHYL_RS15070;Dbxref=Genbank:WP_071002875.1;Name=WP_071002875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444359.1;locus_tag=PKHYL_RS15070;product=DUF2788 domain-containing protein;protein_id=WP_071002875.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2837673	2838059	.	-	.	ID=gene-PKHYL_RS15075;Name=PKHYL_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15075;old_locus_tag=PKHYL_36850
NZ_AP019516.1	Protein Homology	CDS	2837673	2838059	.	-	0	ID=cds-WP_071002874.1;Parent=gene-PKHYL_RS15075;Dbxref=Genbank:WP_071002874.1;Name=WP_071002874.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018389.2;locus_tag=PKHYL_RS15075;product=DUF1176 domain-containing protein;protein_id=WP_071002874.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2838046	2839099	.	-	.	ID=gene-PKHYL_RS15080;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=pseudogene;locus_tag=PKHYL_RS15080;old_locus_tag=PKHYL_36860;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2838046	2839099	.	-	0	ID=cds-PKHYL_RS15080;Parent=gene-PKHYL_RS15080;Note=frameshifted;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444360.1;locus_tag=PKHYL_RS15080;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2839151	2839936	.	-	.	ID=gene-PKHYL_RS15085;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=pseudogene;locus_tag=PKHYL_RS15085;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2839151	2839936	.	-	0	ID=cds-PKHYL_RS15085;Parent=gene-PKHYL_RS15085;Note=frameshifted;Ontology_term=GO:0006400,GO:0008168;gbkey=CDS;gene=cmoA;go_function=methyltransferase activity|0008168||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200698.1;locus_tag=PKHYL_RS15085;product=carboxy-S-adenosyl-L-methionine synthase CmoA;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2840147	2840668	.	+	.	ID=gene-PKHYL_RS15090;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=PKHYL_RS15090;old_locus_tag=PKHYL_36890
NZ_AP019516.1	Protein Homology	CDS	2840147	2840668	.	+	0	ID=cds-WP_071002871.1;Parent=gene-PKHYL_RS15090;Dbxref=Genbank:WP_071002871.1;Name=WP_071002871.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444362.1;locus_tag=PKHYL_RS15090;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_071002871.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2840806	2841471	.	+	.	ID=gene-PKHYL_RS15095;Name=tmpT;gbkey=Gene;gene=tmpT;gene_biotype=protein_coding;locus_tag=PKHYL_RS15095;old_locus_tag=PKHYL_36900
NZ_AP019516.1	Protein Homology	CDS	2840806	2841471	.	+	0	ID=cds-WP_071002870.1;Parent=gene-PKHYL_RS15095;Dbxref=Genbank:WP_071002870.1;Name=WP_071002870.1;Ontology_term=GO:0008119;gbkey=CDS;gene=tmpT;go_function=thiopurine S-methyltransferase activity|0008119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200703.1;locus_tag=PKHYL_RS15095;product=thiopurine S-methyltransferase;protein_id=WP_071002870.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2841806	2843266	.	+	.	ID=gene-PKHYL_RS15100;Name=PKHYL_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15100;old_locus_tag=PKHYL_36910
NZ_AP019516.1	Protein Homology	CDS	2841806	2843266	.	+	0	ID=cds-WP_240365510.1;Parent=gene-PKHYL_RS15100;Dbxref=Genbank:WP_240365510.1;Name=WP_240365510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514556.1;locus_tag=PKHYL_RS15100;product=lytic murein transglycosylase;protein_id=WP_240365510.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2843388	2843687	.	-	.	ID=gene-PKHYL_RS15105;Name=PKHYL_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15105;old_locus_tag=PKHYL_36920
NZ_AP019516.1	Protein Homology	CDS	2843388	2843687	.	-	0	ID=cds-WP_058024783.1;Parent=gene-PKHYL_RS15105;Dbxref=Genbank:WP_058024783.1;Name=WP_058024783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514557.1;locus_tag=PKHYL_RS15105;product=hypothetical protein;protein_id=WP_058024783.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2843924	2844931	.	-	.	ID=gene-PKHYL_RS15110;Name=PKHYL_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15110;old_locus_tag=PKHYL_36930
NZ_AP019516.1	Protein Homology	CDS	2843924	2844931	.	-	0	ID=cds-WP_240365511.1;Parent=gene-PKHYL_RS15110;Dbxref=Genbank:WP_240365511.1;Name=WP_240365511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197761.1;locus_tag=PKHYL_RS15110;product=DUF4062 domain-containing protein;protein_id=WP_240365511.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2845097	2845996	.	-	.	ID=gene-PKHYL_RS15115;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=PKHYL_RS15115;old_locus_tag=PKHYL_36940
NZ_AP019516.1	Protein Homology	CDS	2845097	2845996	.	-	0	ID=cds-WP_240366552.1;Parent=gene-PKHYL_RS15115;Dbxref=Genbank:WP_240366552.1;Name=WP_240366552.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197763.1;locus_tag=PKHYL_RS15115;product=glutamate racemase;protein_id=WP_240366552.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2846262	2846669	.	-	.	ID=gene-PKHYL_RS15120;Name=PKHYL_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15120;old_locus_tag=PKHYL_36950
NZ_AP019516.1	Protein Homology	CDS	2846262	2846669	.	-	0	ID=cds-WP_240365512.1;Parent=gene-PKHYL_RS15120;Dbxref=Genbank:WP_240365512.1;Name=WP_240365512.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018624.2;locus_tag=PKHYL_RS15120;product=DUF1285 domain-containing protein;protein_id=WP_240365512.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2846630	2846944	.	-	.	ID=gene-PKHYL_RS15125;Name=PKHYL_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15125;old_locus_tag=PKHYL_36960
NZ_AP019516.1	Protein Homology	CDS	2846630	2846944	.	-	0	ID=cds-WP_240365513.1;Parent=gene-PKHYL_RS15125;Dbxref=Genbank:WP_240365513.1;Name=WP_240365513.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018624.2;locus_tag=PKHYL_RS15125;product=DUF1285 domain-containing protein;protein_id=WP_240365513.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2847399	2849033	.	+	.	ID=gene-PKHYL_RS15130;Name=PKHYL_RS15130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15130;old_locus_tag=PKHYL_36990;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2847399	2849033	.	+	0	ID=cds-PKHYL_RS15130;Parent=gene-PKHYL_RS15130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017400680.1;locus_tag=PKHYL_RS15130;product=electron transfer flavoprotein-ubiquinone oxidoreductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2850495	2850761	.	+	.	ID=gene-PKHYL_RS15135;Name=PKHYL_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15135;old_locus_tag=PKHYL_37000
NZ_AP019516.1	Protein Homology	CDS	2850495	2850761	.	+	0	ID=cds-WP_240365514.1;Parent=gene-PKHYL_RS15135;Dbxref=Genbank:WP_240365514.1;Name=WP_240365514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281215.1;locus_tag=PKHYL_RS15135;product=DUF4212 domain-containing protein;protein_id=WP_240365514.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2850766	2852220	.	+	.	ID=gene-PKHYL_RS15140;Name=PKHYL_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15140;old_locus_tag=PKHYL_37010
NZ_AP019516.1	Protein Homology	CDS	2850766	2852220	.	+	0	ID=cds-WP_240365515.1;Parent=gene-PKHYL_RS15140;Dbxref=Genbank:WP_240365515.1;Name=WP_240365515.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03648.1;locus_tag=PKHYL_RS15140;product=cation acetate symporter;protein_id=WP_240365515.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2852217	2852633	.	+	.	ID=gene-PKHYL_RS15145;Name=PKHYL_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15145;old_locus_tag=PKHYL_37020
NZ_AP019516.1	Protein Homology	CDS	2852217	2852633	.	+	0	ID=cds-WP_240365516.1;Parent=gene-PKHYL_RS15145;Dbxref=Genbank:WP_240365516.1;Name=WP_240365516.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012686.2;locus_tag=PKHYL_RS15145;product=hypothetical protein;protein_id=WP_240365516.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2852773	2853306	.	+	.	ID=gene-PKHYL_RS15150;Name=PKHYL_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15150;old_locus_tag=PKHYL_37030
NZ_AP019516.1	Protein Homology	CDS	2852773	2853306	.	+	0	ID=cds-WP_240365517.1;Parent=gene-PKHYL_RS15150;Dbxref=Genbank:WP_240365517.1;Name=WP_240365517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959567.1;locus_tag=PKHYL_RS15150;product=hypothetical protein;protein_id=WP_240365517.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2853350	2853949	.	-	.	ID=gene-PKHYL_RS15155;Name=PKHYL_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15155;old_locus_tag=PKHYL_37040
NZ_AP019516.1	Protein Homology	CDS	2853350	2853949	.	-	0	ID=cds-WP_240365518.1;Parent=gene-PKHYL_RS15155;Dbxref=Genbank:WP_240365518.1;Name=WP_240365518.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: protein motif:HMM:NF013827.2;locus_tag=PKHYL_RS15155;product=rhomboid family intramembrane serine protease;protein_id=WP_240365518.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2854127	2854468	.	-	.	ID=gene-PKHYL_RS15160;Name=PKHYL_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15160;old_locus_tag=PKHYL_37050
NZ_AP019516.1	Protein Homology	CDS	2854127	2854468	.	-	0	ID=cds-WP_240365519.1;Parent=gene-PKHYL_RS15160;Dbxref=Genbank:WP_240365519.1;Name=WP_240365519.1;Ontology_term=GO:0009117,GO:0000166,GO:0000287,GO:0008253,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,magnesium ion binding|0000287||IEA,5'-nucleotidase activity|0008253||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: protein motif:HMM:NF017953.2;locus_tag=PKHYL_RS15160;product=5'-nucleotidase;protein_id=WP_240365519.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2854465	2854956	.	-	.	ID=gene-PKHYL_RS15165;Name=PKHYL_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15165;old_locus_tag=PKHYL_37060
NZ_AP019516.1	Protein Homology	CDS	2854465	2854956	.	-	0	ID=cds-WP_240365520.1;Parent=gene-PKHYL_RS15165;Dbxref=Genbank:WP_240365520.1;Name=WP_240365520.1;Ontology_term=GO:0009117,GO:0000166,GO:0000287,GO:0008253,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,magnesium ion binding|0000287||IEA,5'-nucleotidase activity|0008253||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: protein motif:HMM:NF017953.2;locus_tag=PKHYL_RS15165;product=5'-nucleotidase;protein_id=WP_240365520.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2855403	2856260	.	+	.	ID=gene-PKHYL_RS15170;Name=PKHYL_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15170;old_locus_tag=PKHYL_37070
NZ_AP019516.1	Protein Homology	CDS	2855403	2856260	.	+	0	ID=cds-WP_197496787.1;Parent=gene-PKHYL_RS15170;Dbxref=Genbank:WP_197496787.1;Name=WP_197496787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959425.1;locus_tag=PKHYL_RS15170;product=pirin family protein;protein_id=WP_197496787.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2856498	2856917	.	-	.	ID=gene-PKHYL_RS15175;Name=PKHYL_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15175;old_locus_tag=PKHYL_37080
NZ_AP019516.1	GeneMarkS-2+	CDS	2856498	2856917	.	-	0	ID=cds-WP_240365521.1;Parent=gene-PKHYL_RS15175;Dbxref=Genbank:WP_240365521.1;Name=WP_240365521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15175;product=hypothetical protein;protein_id=WP_240365521.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2856914	2857276	.	-	.	ID=gene-PKHYL_RS15180;Name=PKHYL_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15180;old_locus_tag=PKHYL_37090
NZ_AP019516.1	GeneMarkS-2+	CDS	2856914	2857276	.	-	0	ID=cds-WP_240365522.1;Parent=gene-PKHYL_RS15180;Dbxref=Genbank:WP_240365522.1;Name=WP_240365522.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15180;product=hypothetical protein;protein_id=WP_240365522.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2857408	2858238	.	-	.	ID=gene-PKHYL_RS15185;Name=PKHYL_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15185;old_locus_tag=PKHYL_37100
NZ_AP019516.1	Protein Homology	CDS	2857408	2858238	.	-	0	ID=cds-WP_071002858.1;Parent=gene-PKHYL_RS15185;Dbxref=Genbank:WP_071002858.1;Name=WP_071002858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019767301.1;locus_tag=PKHYL_RS15185;product=nucleotide-binding protein;protein_id=WP_071002858.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2858452	2858565	.	-	.	ID=gene-PKHYL_RS15190;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PKHYL_RS15190;old_locus_tag=PKHYL_r00040
NZ_AP019516.1	cmsearch	rRNA	2858452	2858565	.	-	.	ID=rna-PKHYL_RS15190;Parent=gene-PKHYL_RS15190;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS15190;product=5S ribosomal RNA
NZ_AP019516.1	cmsearch	exon	2858452	2858565	.	-	.	ID=exon-PKHYL_RS15190-1;Parent=rna-PKHYL_RS15190;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS15190;product=5S ribosomal RNA
NZ_AP019516.1	RefSeq	gene	2858727	2861585	.	-	.	ID=gene-PKHYL_RS15195;Name=PKHYL_RS15195;gbkey=Gene;gene_biotype=rRNA;locus_tag=PKHYL_RS15195;old_locus_tag=PKHYL_r00050
NZ_AP019516.1	cmsearch	rRNA	2858727	2861585	.	-	.	ID=rna-PKHYL_RS15195;Parent=gene-PKHYL_RS15195;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS15195;product=23S ribosomal RNA
NZ_AP019516.1	cmsearch	exon	2858727	2861585	.	-	.	ID=exon-PKHYL_RS15195-1;Parent=rna-PKHYL_RS15195;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS15195;product=23S ribosomal RNA
NZ_AP019516.1	RefSeq	gene	2861937	2862012	.	-	.	ID=gene-PKHYL_RS15200;Name=PKHYL_RS15200;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS15200;old_locus_tag=PKHYL_t00390
NZ_AP019516.1	tRNAscan-SE	tRNA	2861937	2862012	.	-	.	ID=rna-PKHYL_RS15200;Parent=gene-PKHYL_RS15200;anticodon=(pos:complement(2861977..2861979));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS15200;product=tRNA-Ala
NZ_AP019516.1	tRNAscan-SE	exon	2861937	2862012	.	-	.	ID=exon-PKHYL_RS15200-1;Parent=rna-PKHYL_RS15200;anticodon=(pos:complement(2861977..2861979));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS15200;product=tRNA-Ala
NZ_AP019516.1	RefSeq	gene	2862109	2862185	.	-	.	ID=gene-PKHYL_RS15205;Name=PKHYL_RS15205;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS15205;old_locus_tag=PKHYL_t00400
NZ_AP019516.1	tRNAscan-SE	tRNA	2862109	2862185	.	-	.	ID=rna-PKHYL_RS15205;Parent=gene-PKHYL_RS15205;anticodon=(pos:complement(2862149..2862151));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS15205;product=tRNA-Ile
NZ_AP019516.1	tRNAscan-SE	exon	2862109	2862185	.	-	.	ID=exon-PKHYL_RS15205-1;Parent=rna-PKHYL_RS15205;anticodon=(pos:complement(2862149..2862151));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS15205;product=tRNA-Ile
NZ_AP019516.1	RefSeq	gene	2862259	2863794	.	-	.	ID=gene-PKHYL_RS15210;Name=PKHYL_RS15210;gbkey=Gene;gene_biotype=rRNA;locus_tag=PKHYL_RS15210;old_locus_tag=PKHYL_r00060
NZ_AP019516.1	cmsearch	rRNA	2862259	2863794	.	-	.	ID=rna-PKHYL_RS15210;Parent=gene-PKHYL_RS15210;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS15210;product=16S ribosomal RNA
NZ_AP019516.1	cmsearch	exon	2862259	2863794	.	-	.	ID=exon-PKHYL_RS15210-1;Parent=rna-PKHYL_RS15210;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS15210;product=16S ribosomal RNA
NZ_AP019516.1	RefSeq	gene	2864482	2865177	.	-	.	ID=gene-PKHYL_RS15215;Name=PKHYL_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15215;old_locus_tag=PKHYL_37110
NZ_AP019516.1	Protein Homology	CDS	2864482	2865177	.	-	0	ID=cds-WP_240365523.1;Parent=gene-PKHYL_RS15215;Dbxref=Genbank:WP_240365523.1;Name=WP_240365523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197791.1;locus_tag=PKHYL_RS15215;product=DNA glycosylase;protein_id=WP_240365523.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2865546	2866206	.	+	.	ID=gene-PKHYL_RS15220;Name=upp;gbkey=Gene;gene=upp;gene_biotype=pseudogene;locus_tag=PKHYL_RS15220;old_locus_tag=PKHYL_37120;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2865546	2866206	.	+	0	ID=cds-PKHYL_RS15220;Parent=gene-PKHYL_RS15220;Note=frameshifted;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197794.1;locus_tag=PKHYL_RS15220;product=uracil phosphoribosyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2866280	2867032	.	+	.	ID=gene-PKHYL_RS15225;Name=PKHYL_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15225;old_locus_tag=PKHYL_37130
NZ_AP019516.1	Protein Homology	CDS	2866280	2867032	.	+	0	ID=cds-WP_071002857.1;Parent=gene-PKHYL_RS15225;Dbxref=Genbank:WP_071002857.1;Name=WP_071002857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000880601.1;locus_tag=PKHYL_RS15225;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_071002857.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2867041	2867706	.	-	.	ID=gene-PKHYL_RS15230;Name=PKHYL_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15230;old_locus_tag=PKHYL_37140
NZ_AP019516.1	Protein Homology	CDS	2867041	2867706	.	-	0	ID=cds-WP_240365524.1;Parent=gene-PKHYL_RS15230;Dbxref=Genbank:WP_240365524.1;Name=WP_240365524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514574.1;locus_tag=PKHYL_RS15230;product=hypothetical protein;protein_id=WP_240365524.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2867995	2868909	.	+	.	ID=gene-PKHYL_RS15235;Name=PKHYL_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15235;old_locus_tag=PKHYL_37150
NZ_AP019516.1	Protein Homology	CDS	2867995	2868909	.	+	0	ID=cds-WP_240365525.1;Parent=gene-PKHYL_RS15235;Dbxref=Genbank:WP_240365525.1;Name=WP_240365525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197800.1;locus_tag=PKHYL_RS15235;product=alpha/beta fold hydrolase;protein_id=WP_240365525.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2868906	2869145	.	-	.	ID=gene-PKHYL_RS15240;Name=PKHYL_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15240;old_locus_tag=PKHYL_37160
NZ_AP019516.1	Protein Homology	CDS	2868906	2869145	.	-	0	ID=cds-WP_071002855.1;Parent=gene-PKHYL_RS15240;Dbxref=Genbank:WP_071002855.1;Name=WP_071002855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007395931.1;locus_tag=PKHYL_RS15240;product=DUF1653 domain-containing protein;protein_id=WP_071002855.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2869169	2869748	.	-	.	ID=gene-PKHYL_RS15245;Name=PKHYL_RS15245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15245;old_locus_tag=PKHYL_37170;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2869169	2869748	.	-	0	ID=cds-PKHYL_RS15245;Parent=gene-PKHYL_RS15245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018680115.1;locus_tag=PKHYL_RS15245;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2869787	2871002	.	-	.	ID=gene-PKHYL_RS15250;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=pseudogene;locus_tag=PKHYL_RS15250;old_locus_tag=PKHYL_37180;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2869787	2871002	.	-	0	ID=cds-PKHYL_RS15250;Parent=gene-PKHYL_RS15250;Note=frameshifted;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197807.1;locus_tag=PKHYL_RS15250;product=tyrosine--tRNA ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2871146	2871307	.	+	.	ID=gene-PKHYL_RS15255;Name=PKHYL_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15255;old_locus_tag=PKHYL_37190
NZ_AP019516.1	GeneMarkS-2+	CDS	2871146	2871307	.	+	0	ID=cds-WP_240365526.1;Parent=gene-PKHYL_RS15255;Dbxref=Genbank:WP_240365526.1;Name=WP_240365526.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15255;product=hypothetical protein;protein_id=WP_240365526.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2871300	2872538	.	+	.	ID=gene-PKHYL_RS15260;Name=PKHYL_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15260;old_locus_tag=PKHYL_37200
NZ_AP019516.1	Protein Homology	CDS	2871300	2872538	.	+	0	ID=cds-WP_240365527.1;Parent=gene-PKHYL_RS15260;Dbxref=Genbank:WP_240365527.1;Name=WP_240365527.1;Ontology_term=GO:0006040,GO:0009254,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019673602.1;locus_tag=PKHYL_RS15260;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_240365527.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2872692	2874026	.	+	.	ID=gene-PKHYL_RS15265;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=PKHYL_RS15265;old_locus_tag=PKHYL_37210
NZ_AP019516.1	Protein Homology	CDS	2872692	2874026	.	+	0	ID=cds-WP_071003747.1;Parent=gene-PKHYL_RS15265;Dbxref=Genbank:WP_071003747.1;Name=WP_071003747.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197811.1;locus_tag=PKHYL_RS15265;product=beta-ketoacyl-ACP synthase II;protein_id=WP_071003747.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2874190	2874975	.	+	.	ID=gene-PKHYL_RS15270;Name=PKHYL_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15270;old_locus_tag=PKHYL_37220
NZ_AP019516.1	Protein Homology	CDS	2874190	2874975	.	+	0	ID=cds-WP_071002851.1;Parent=gene-PKHYL_RS15270;Dbxref=Genbank:WP_071002851.1;Name=WP_071002851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281229.1;locus_tag=PKHYL_RS15270;product=hypothetical protein;protein_id=WP_071002851.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2875190	2877007	.	-	.	ID=gene-PKHYL_RS15275;Name=PKHYL_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15275;old_locus_tag=PKHYL_37230
NZ_AP019516.1	Protein Homology	CDS	2875190	2877007	.	-	0	ID=cds-WP_071002850.1;Parent=gene-PKHYL_RS15275;Dbxref=Genbank:WP_071002850.1;Name=WP_071002850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281230.1;locus_tag=PKHYL_RS15275;product=aminopeptidase P family protein;protein_id=WP_071002850.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2877280	2878846	.	-	.	ID=gene-PKHYL_RS15280;Name=PKHYL_RS15280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15280;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2877280	2878846	.	-	0	ID=cds-PKHYL_RS15280;Parent=gene-PKHYL_RS15280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197817.1;locus_tag=PKHYL_RS15280;product=peptide MFS transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2879137	2879592	.	-	.	ID=gene-PKHYL_RS15285;Name=PKHYL_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15285;old_locus_tag=PKHYL_37260
NZ_AP019516.1	Protein Homology	CDS	2879137	2879592	.	-	0	ID=cds-WP_240365528.1;Parent=gene-PKHYL_RS15285;Dbxref=Genbank:WP_240365528.1;Name=WP_240365528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197819.1;locus_tag=PKHYL_RS15285;product=hypothetical protein;protein_id=WP_240365528.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2879729	2881295	.	-	.	ID=gene-PKHYL_RS17815;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=pseudogene;locus_tag=PKHYL_RS17815;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2879729	2881295	.	-	0	ID=cds-PKHYL_RS17815;Parent=gene-PKHYL_RS17815;Note=frameshifted;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961548.1;locus_tag=PKHYL_RS17815;product=apolipoprotein N-acyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2881571	2882470	.	-	.	ID=gene-PKHYL_RS15315;Name=PKHYL_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15315;old_locus_tag=PKHYL_37310
NZ_AP019516.1	Protein Homology	CDS	2881571	2882470	.	-	0	ID=cds-WP_240365533.1;Parent=gene-PKHYL_RS15315;Dbxref=Genbank:WP_240365533.1;Name=WP_240365533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281233.1;locus_tag=PKHYL_RS15315;product=CBS domain-containing protein;protein_id=WP_240365533.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2882734	2883648	.	+	.	ID=gene-PKHYL_RS17820;Name=PKHYL_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17820
NZ_AP019516.1	Protein Homology	CDS	2882734	2883648	.	+	0	ID=cds-WP_269778189.1;Parent=gene-PKHYL_RS17820;Dbxref=Genbank:WP_269778189.1;Name=WP_269778189.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024779.2;locus_tag=PKHYL_RS17820;product=DUF4105 domain-containing protein;protein_id=WP_269778189.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2883617	2884039	.	+	.	ID=gene-PKHYL_RS17825;Name=PKHYL_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17825;old_locus_tag=PKHYL_37330
NZ_AP019516.1	Protein Homology	CDS	2883617	2884039	.	+	0	ID=cds-WP_269778190.1;Parent=gene-PKHYL_RS17825;Dbxref=Genbank:WP_269778190.1;Name=WP_269778190.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024779.2;locus_tag=PKHYL_RS17825;product=DUF4105 domain-containing protein;protein_id=WP_269778190.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2884087	2884680	.	-	.	ID=gene-PKHYL_RS15325;Name=PKHYL_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15325;old_locus_tag=PKHYL_37340
NZ_AP019516.1	Protein Homology	CDS	2884087	2884680	.	-	0	ID=cds-WP_240365534.1;Parent=gene-PKHYL_RS15325;Dbxref=Genbank:WP_240365534.1;Name=WP_240365534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197824.1;locus_tag=PKHYL_RS15325;product=YcgN family cysteine cluster protein;protein_id=WP_240365534.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2884841	2885577	.	+	.	ID=gene-PKHYL_RS15330;Name=PKHYL_RS15330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15330;old_locus_tag=PKHYL_37360;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2884841	2885577	.	+	0	ID=cds-PKHYL_RS15330;Parent=gene-PKHYL_RS15330;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281236.1;locus_tag=PKHYL_RS15330;product=dienelactone hydrolase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2885748	2885909	.	+	.	ID=gene-PKHYL_RS15335;Name=PKHYL_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15335
NZ_AP019516.1	GeneMarkS-2+	CDS	2885748	2885909	.	+	0	ID=cds-WP_240365535.1;Parent=gene-PKHYL_RS15335;Dbxref=Genbank:WP_240365535.1;Name=WP_240365535.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15335;product=hypothetical protein;protein_id=WP_240365535.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2885906	2888856	.	+	.	ID=gene-PKHYL_RS15340;Name=PKHYL_RS15340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15340;old_locus_tag=PKHYL_37380;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2885906	2888856	.	+	0	ID=cds-PKHYL_RS15340;Parent=gene-PKHYL_RS15340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021606.2;locus_tag=PKHYL_RS15340;product=DUF2339 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2888982	2889260	.	+	.	ID=gene-PKHYL_RS15345;Name=PKHYL_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15345;old_locus_tag=PKHYL_37390
NZ_AP019516.1	GeneMarkS-2+	CDS	2888982	2889260	.	+	0	ID=cds-WP_240365536.1;Parent=gene-PKHYL_RS15345;Dbxref=Genbank:WP_240365536.1;Name=WP_240365536.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15345;product=hypothetical protein;protein_id=WP_240365536.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2889217	2889972	.	+	.	ID=gene-PKHYL_RS15350;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=PKHYL_RS15350;old_locus_tag=PKHYL_37400
NZ_AP019516.1	Protein Homology	CDS	2889217	2889972	.	+	0	ID=cds-WP_240365537.1;Parent=gene-PKHYL_RS15350;Dbxref=Genbank:WP_240365537.1;Name=WP_240365537.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: protein motif:HMM:TIGR03596.1;locus_tag=PKHYL_RS15350;product=ribosome biogenesis GTPase YlqF;protein_id=WP_240365537.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2890070	2890393	.	+	.	ID=gene-PKHYL_RS15355;Name=PKHYL_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15355;old_locus_tag=PKHYL_37410
NZ_AP019516.1	Protein Homology	CDS	2890070	2890393	.	+	0	ID=cds-WP_240365538.1;Parent=gene-PKHYL_RS15355;Dbxref=Genbank:WP_240365538.1;Name=WP_240365538.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019313.2;locus_tag=PKHYL_RS15355;product=P-loop NTPase fold protein;protein_id=WP_240365538.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2890504	2891133	.	+	.	ID=gene-PKHYL_RS15360;Name=PKHYL_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15360;old_locus_tag=PKHYL_37420
NZ_AP019516.1	Protein Homology	CDS	2890504	2891133	.	+	0	ID=cds-WP_240365539.1;Parent=gene-PKHYL_RS15360;Dbxref=Genbank:WP_240365539.1;Name=WP_240365539.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019313.2;locus_tag=PKHYL_RS15360;product=P-loop NTPase fold protein;protein_id=WP_240365539.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2891155	2892147	.	-	.	ID=gene-PKHYL_RS15365;Name=PKHYL_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15365;old_locus_tag=PKHYL_37430
NZ_AP019516.1	Protein Homology	CDS	2891155	2892147	.	-	0	ID=cds-WP_240365287.1-8;Parent=gene-PKHYL_RS15365;Dbxref=Genbank:WP_240365287.1;Name=WP_240365287.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033563.0;locus_tag=PKHYL_RS15365;product=IS30 family transposase;protein_id=WP_240365287.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2892656	2893441	.	+	.	ID=gene-PKHYL_RS15370;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=PKHYL_RS15370;old_locus_tag=PKHYL_37450
NZ_AP019516.1	Protein Homology	CDS	2892656	2893441	.	+	0	ID=cds-WP_240365540.1;Parent=gene-PKHYL_RS15370;Dbxref=Genbank:WP_240365540.1;Name=WP_240365540.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0004844;gbkey=CDS;gene=mutY;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:TIGR01084.1;locus_tag=PKHYL_RS15370;product=A/G-specific adenine glycosylase;protein_id=WP_240365540.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2893435	2893941	.	+	.	ID=gene-PKHYL_RS15375;Name=PKHYL_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15375;old_locus_tag=PKHYL_37460
NZ_AP019516.1	GeneMarkS-2+	CDS	2893435	2893941	.	+	0	ID=cds-WP_240365541.1;Parent=gene-PKHYL_RS15375;Dbxref=Genbank:WP_240365541.1;Name=WP_240365541.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15375;product=hypothetical protein;protein_id=WP_240365541.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2894054	2894955	.	-	.	ID=gene-PKHYL_RS15380;Name=PKHYL_RS15380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15380;old_locus_tag=PKHYL_37470;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2894054	2894955	.	-	0	ID=cds-PKHYL_RS15380;Parent=gene-PKHYL_RS15380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281240.1;locus_tag=PKHYL_RS15380;product=acyl-CoA thioesterase II;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2895329	2898229	.	-	.	ID=gene-PKHYL_RS15385;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=PKHYL_RS15385;old_locus_tag=PKHYL_37480
NZ_AP019516.1	Protein Homology	CDS	2895329	2898229	.	-	0	ID=cds-WP_240365542.1;Parent=gene-PKHYL_RS15385;Dbxref=Genbank:WP_240365542.1;Name=WP_240365542.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197841.1;locus_tag=PKHYL_RS15385;product=RNA polymerase-associated protein RapA;protein_id=WP_240365542.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2898648	2899594	.	+	.	ID=gene-PKHYL_RS15390;Name=PKHYL_RS15390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15390;old_locus_tag=PKHYL_37490;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2898648	2899594	.	+	0	ID=cds-PKHYL_RS15390;Parent=gene-PKHYL_RS15390;Note=frameshifted;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394623.1;locus_tag=PKHYL_RS15390;product=NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2899616	2900569	.	-	.	ID=gene-PKHYL_RS15395;Name=PKHYL_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15395;old_locus_tag=PKHYL_37510
NZ_AP019516.1	GeneMarkS-2+	CDS	2899616	2900569	.	-	0	ID=cds-WP_240365543.1;Parent=gene-PKHYL_RS15395;Dbxref=Genbank:WP_240365543.1;Name=WP_240365543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15395;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_240365543.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2900536	2900982	.	-	.	ID=gene-PKHYL_RS15400;Name=PKHYL_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15400;old_locus_tag=PKHYL_37520
NZ_AP019516.1	GeneMarkS-2+	CDS	2900536	2900982	.	-	0	ID=cds-WP_240365544.1;Parent=gene-PKHYL_RS15400;Dbxref=Genbank:WP_240365544.1;Name=WP_240365544.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15400;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_240365544.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2900998	2901219	.	-	.	ID=gene-PKHYL_RS15405;Name=PKHYL_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15405;old_locus_tag=PKHYL_37530
NZ_AP019516.1	GeneMarkS-2+	CDS	2900998	2901219	.	-	0	ID=cds-WP_240365545.1;Parent=gene-PKHYL_RS15405;Dbxref=Genbank:WP_240365545.1;Name=WP_240365545.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15405;product=hypothetical protein;protein_id=WP_240365545.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2901309	2902022	.	-	.	ID=gene-PKHYL_RS15410;Name=PKHYL_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15410;old_locus_tag=PKHYL_37540
NZ_AP019516.1	Protein Homology	CDS	2901309	2902022	.	-	0	ID=cds-WP_240365546.1;Parent=gene-PKHYL_RS15410;Dbxref=Genbank:WP_240365546.1;Name=WP_240365546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003663606.1;locus_tag=PKHYL_RS15410;product=RluA family pseudouridine synthase;protein_id=WP_240365546.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2902415	2902741	.	+	.	ID=gene-PKHYL_RS15415;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=PKHYL_RS15415;old_locus_tag=PKHYL_37550
NZ_AP019516.1	Protein Homology	CDS	2902415	2902741	.	+	0	ID=cds-WP_058023544.1;Parent=gene-PKHYL_RS15415;Dbxref=Genbank:WP_058023544.1;Name=WP_058023544.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657354.1;locus_tag=PKHYL_RS15415;product=thioredoxin;protein_id=WP_058023544.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2903264	2904531	.	+	.	ID=gene-PKHYL_RS15420;Name=rho;gbkey=Gene;gene=rho;gene_biotype=pseudogene;locus_tag=PKHYL_RS15420;old_locus_tag=PKHYL_37560;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2903264	2904531	.	+	0	ID=cds-PKHYL_RS15420;Parent=gene-PKHYL_RS15420;Note=frameshifted;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019838192.1;locus_tag=PKHYL_RS15420;product=transcription termination factor Rho;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2904850	2905077	.	+	.	ID=gene-PKHYL_RS15425;Name=PKHYL_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15425;old_locus_tag=PKHYL_37570
NZ_AP019516.1	Protein Homology	CDS	2904850	2905077	.	+	0	ID=cds-WP_058023542.1;Parent=gene-PKHYL_RS15425;Dbxref=Genbank:WP_058023542.1;Name=WP_058023542.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197855.1;locus_tag=PKHYL_RS15425;product=glycine zipper 2TM domain-containing protein;protein_id=WP_058023542.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2905260	2906149	.	-	.	ID=gene-PKHYL_RS15430;Name=PKHYL_RS15430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15430;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2905260	2906149	.	-	0	ID=cds-PKHYL_RS15430;Parent=gene-PKHYL_RS15430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016143219.1;locus_tag=PKHYL_RS15430;product=zinc metallopeptidase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2906695	2907057	.	+	.	ID=gene-PKHYL_RS15435;Name=PKHYL_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15435;old_locus_tag=PKHYL_37600
NZ_AP019516.1	Protein Homology	CDS	2906695	2907057	.	+	0	ID=cds-WP_071002831.1;Parent=gene-PKHYL_RS15435;Dbxref=Genbank:WP_071002831.1;Name=WP_071002831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444409.1;locus_tag=PKHYL_RS15435;product=hypothetical protein;protein_id=WP_071002831.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2907239	2907537	.	-	.	ID=gene-PKHYL_RS15440;Name=PKHYL_RS15440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15440;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2907239	2907537	.	-	0	ID=cds-PKHYL_RS15440;Parent=gene-PKHYL_RS15440;Note=frameshifted;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281249.1;locus_tag=PKHYL_RS15440;product=integration host factor subunit alpha;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2907785	2910191	.	-	.	ID=gene-PKHYL_RS15445;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=pseudogene;locus_tag=PKHYL_RS15445;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2907785	2910191	.	-	0	ID=cds-PKHYL_RS15445;Parent=gene-PKHYL_RS15445;Note=frameshifted;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444410.1;locus_tag=PKHYL_RS15445;product=phenylalanine--tRNA ligase subunit beta;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2910294	2911349	.	-	.	ID=gene-PKHYL_RS15450;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=pseudogene;locus_tag=PKHYL_RS15450;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2910294	2911349	.	-	0	ID=cds-PKHYL_RS15450;Parent=gene-PKHYL_RS15450;Note=frameshifted;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281251.1;locus_tag=PKHYL_RS15450;product=phenylalanine--tRNA ligase subunit alpha;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2911657	2912012	.	-	.	ID=gene-PKHYL_RS15455;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=pseudogene;locus_tag=PKHYL_RS15455;old_locus_tag=PKHYL_37670;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2911657	2912012	.	-	0	ID=cds-PKHYL_RS15455;Parent=gene-PKHYL_RS15455;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=PKHYL_RS15455;product=50S ribosomal protein L20;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2912148	2912345	.	-	.	ID=gene-PKHYL_RS15460;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=PKHYL_RS15460;old_locus_tag=PKHYL_37680
NZ_AP019516.1	Protein Homology	CDS	2912148	2912345	.	-	0	ID=cds-WP_058023536.1;Parent=gene-PKHYL_RS15460;Dbxref=Genbank:WP_058023536.1;Name=WP_058023536.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281253.1;locus_tag=PKHYL_RS15460;product=50S ribosomal protein L35;protein_id=WP_058023536.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2912782	2913225	.	+	.	ID=gene-PKHYL_RS15465;Name=PKHYL_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15465;old_locus_tag=PKHYL_37690
NZ_AP019516.1	Protein Homology	CDS	2912782	2913225	.	+	0	ID=cds-WP_071002828.1;Parent=gene-PKHYL_RS15465;Dbxref=Genbank:WP_071002828.1;Name=WP_071002828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197869.1;locus_tag=PKHYL_RS15465;product=thioesterase;protein_id=WP_071002828.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2913403	2914239	.	+	.	ID=gene-PKHYL_RS15470;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=PKHYL_RS15470;old_locus_tag=PKHYL_37700
NZ_AP019516.1	Protein Homology	CDS	2913403	2914239	.	+	0	ID=cds-WP_071002827.1;Parent=gene-PKHYL_RS15470;Dbxref=Genbank:WP_071002827.1;Name=WP_071002827.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444412.1;locus_tag=PKHYL_RS15470;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_071002827.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2914444	2914686	.	+	.	ID=gene-PKHYL_RS15475;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=PKHYL_RS15475;old_locus_tag=PKHYL_37710
NZ_AP019516.1	Protein Homology	CDS	2914444	2914686	.	+	0	ID=cds-WP_058023534.1;Parent=gene-PKHYL_RS15475;Dbxref=Genbank:WP_058023534.1;Name=WP_058023534.1;Ontology_term=GO:0043953,GO:0016020;gbkey=CDS;gene=tatA;go_component=membrane|0016020||IEA;go_process=protein transport by the Tat complex|0043953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514610.1;locus_tag=PKHYL_RS15475;product=Sec-independent protein translocase subunit TatA;protein_id=WP_058023534.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2914713	2914952	.	+	.	ID=gene-PKHYL_RS15480;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=PKHYL_RS15480;old_locus_tag=PKHYL_37720
NZ_AP019516.1	Protein Homology	CDS	2914713	2914952	.	+	0	ID=cds-WP_240365547.1;Parent=gene-PKHYL_RS15480;Dbxref=Genbank:WP_240365547.1;Name=WP_240365547.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: protein motif:HMM:TIGR01410.1;locus_tag=PKHYL_RS15480;product=Sec-independent protein translocase protein TatB;protein_id=WP_240365547.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2914954	2915370	.	+	.	ID=gene-PKHYL_RS15485;Name=PKHYL_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15485;old_locus_tag=PKHYL_37730
NZ_AP019516.1	Protein Homology	CDS	2914954	2915370	.	+	0	ID=cds-WP_240365548.1;Parent=gene-PKHYL_RS15485;Dbxref=Genbank:WP_240365548.1;Name=WP_240365548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019520322.1;locus_tag=PKHYL_RS15485;product=hypothetical protein;protein_id=WP_240365548.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2915374	2916261	.	+	.	ID=gene-PKHYL_RS15490;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=PKHYL_RS15490;old_locus_tag=PKHYL_37740
NZ_AP019516.1	Protein Homology	CDS	2915374	2916261	.	+	0	ID=cds-WP_071002826.1;Parent=gene-PKHYL_RS15490;Dbxref=Genbank:WP_071002826.1;Name=WP_071002826.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197884.1;locus_tag=PKHYL_RS15490;product=twin-arginine translocase subunit TatC;protein_id=WP_071002826.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2916424	2917918	.	+	.	ID=gene-PKHYL_RS15495;Name=PKHYL_RS15495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15495;old_locus_tag=PKHYL_37750;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2916424	2917918	.	+	0	ID=cds-PKHYL_RS15495;Parent=gene-PKHYL_RS15495;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514613.1;locus_tag=PKHYL_RS15495;product=UvrD-helicase domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2918089	2918331	.	-	.	ID=gene-PKHYL_RS15500;Name=PKHYL_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15500;old_locus_tag=PKHYL_37780
NZ_AP019516.1	GeneMarkS-2+	CDS	2918089	2918331	.	-	0	ID=cds-WP_093071238.1;Parent=gene-PKHYL_RS15500;Dbxref=Genbank:WP_093071238.1;Name=WP_093071238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15500;product=hypothetical protein;protein_id=WP_093071238.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2918448	2918762	.	-	.	ID=gene-PKHYL_RS15505;Name=PKHYL_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15505;old_locus_tag=PKHYL_37790
NZ_AP019516.1	GeneMarkS-2+	CDS	2918448	2918762	.	-	0	ID=cds-WP_240365549.1;Parent=gene-PKHYL_RS15505;Dbxref=Genbank:WP_240365549.1;Name=WP_240365549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15505;product=hypothetical protein;protein_id=WP_240365549.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2918847	2919848	.	+	.	ID=gene-PKHYL_RS15510;Name=PKHYL_RS15510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15510;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2918847	2919848	.	+	0	ID=cds-PKHYL_RS15510;Parent=gene-PKHYL_RS15510;Note=frameshifted;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444416.1;locus_tag=PKHYL_RS15510;product=tRNA-dihydrouridine synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2919898	2920323	.	-	.	ID=gene-PKHYL_RS15515;Name=PKHYL_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15515;old_locus_tag=PKHYL_37830
NZ_AP019516.1	Protein Homology	CDS	2919898	2920323	.	-	0	ID=cds-WP_071003744.1;Parent=gene-PKHYL_RS15515;Dbxref=Genbank:WP_071003744.1;Name=WP_071003744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514615.1;locus_tag=PKHYL_RS15515;product=MAPEG family protein;protein_id=WP_071003744.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2920338	2920751	.	-	.	ID=gene-PKHYL_RS15520;Name=PKHYL_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15520;old_locus_tag=PKHYL_37840
NZ_AP019516.1	Protein Homology	CDS	2920338	2920751	.	-	0	ID=cds-WP_058023529.1;Parent=gene-PKHYL_RS15520;Dbxref=Genbank:WP_058023529.1;Name=WP_058023529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514616.1;locus_tag=PKHYL_RS15520;product=OsmC family protein;protein_id=WP_058023529.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2921203	2921726	.	+	.	ID=gene-PKHYL_RS15525;Name=PKHYL_RS15525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15525;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2921203	2921726	.	+	0	ID=cds-PKHYL_RS15525;Parent=gene-PKHYL_RS15525;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672691.1;locus_tag=PKHYL_RS15525;product=RNA pyrophosphohydrolase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2921874	2922707	.	-	.	ID=gene-PKHYL_RS15530;Name=PKHYL_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15530;old_locus_tag=PKHYL_37870
NZ_AP019516.1	Protein Homology	CDS	2921874	2922707	.	-	0	ID=cds-WP_058023526.1;Parent=gene-PKHYL_RS15530;Dbxref=Genbank:WP_058023526.1;Name=WP_058023526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281264.1;locus_tag=PKHYL_RS15530;product=NRDE family protein;protein_id=WP_058023526.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2922820	2923128	.	-	.	ID=gene-PKHYL_RS15535;Name=PKHYL_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15535;old_locus_tag=PKHYL_37880
NZ_AP019516.1	Protein Homology	CDS	2922820	2923128	.	-	0	ID=cds-WP_240365550.1;Parent=gene-PKHYL_RS15535;Dbxref=Genbank:WP_240365550.1;Name=WP_240365550.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024985.2;locus_tag=PKHYL_RS15535;product=DUF4139 domain-containing protein;protein_id=WP_240365550.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2923136	2923381	.	-	.	ID=gene-PKHYL_RS15540;Name=PKHYL_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15540;old_locus_tag=PKHYL_37890
NZ_AP019516.1	GeneMarkS-2+	CDS	2923136	2923381	.	-	0	ID=cds-WP_240365551.1;Parent=gene-PKHYL_RS15540;Dbxref=Genbank:WP_240365551.1;Name=WP_240365551.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15540;product=DUF4139 domain-containing protein;protein_id=WP_240365551.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2923378	2923806	.	-	.	ID=gene-PKHYL_RS15545;Name=PKHYL_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15545;old_locus_tag=PKHYL_37900
NZ_AP019516.1	Protein Homology	CDS	2923378	2923806	.	-	0	ID=cds-WP_240365552.1;Parent=gene-PKHYL_RS15545;Dbxref=Genbank:WP_240365552.1;Name=WP_240365552.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024985.2;locus_tag=PKHYL_RS15545;product=DUF4139 domain-containing protein;protein_id=WP_240365552.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2923703	2924452	.	-	.	ID=gene-PKHYL_RS15550;Name=PKHYL_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15550;old_locus_tag=PKHYL_37910
NZ_AP019516.1	Protein Homology	CDS	2923703	2924452	.	-	0	ID=cds-WP_240365553.1;Parent=gene-PKHYL_RS15550;Dbxref=Genbank:WP_240365553.1;Name=WP_240365553.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024987.2;locus_tag=PKHYL_RS15550;product=DUF4140 domain-containing protein;protein_id=WP_240365553.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2924893	2926194	.	+	.	ID=gene-PKHYL_RS15555;Name=urtA;gbkey=Gene;gene=urtA;gene_biotype=protein_coding;locus_tag=PKHYL_RS15555;old_locus_tag=PKHYL_37920
NZ_AP019516.1	Protein Homology	CDS	2924893	2926194	.	+	0	ID=cds-WP_240365554.1;Parent=gene-PKHYL_RS15555;Dbxref=Genbank:WP_240365554.1;Name=WP_240365554.1;Ontology_term=GO:0015840,GO:0033219,GO:0033221,GO:0030288,GO:0055052;gbkey=CDS;gene=urtA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=urea binding|0033219||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004691771.1;locus_tag=PKHYL_RS15555;product=urea ABC transporter substrate-binding protein;protein_id=WP_240365554.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2926642	2928236	.	+	.	ID=gene-PKHYL_RS15560;Name=urtB;gbkey=Gene;gene=urtB;gene_biotype=pseudogene;locus_tag=PKHYL_RS15560;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2926642	2928236	.	+	0	ID=cds-PKHYL_RS15560;Parent=gene-PKHYL_RS15560;Note=frameshifted;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672694.1;locus_tag=PKHYL_RS15560;product=urea ABC transporter permease subunit UrtB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2928247	2929317	.	+	.	ID=gene-PKHYL_RS15565;Name=urtC;gbkey=Gene;gene=urtC;gene_biotype=pseudogene;locus_tag=PKHYL_RS15565;old_locus_tag=PKHYL_37970;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2928247	2929317	.	+	0	ID=cds-PKHYL_RS15565;Parent=gene-PKHYL_RS15565;Note=frameshifted;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200558.1;locus_tag=PKHYL_RS15565;product=urea ABC transporter permease subunit UrtC;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2929353	2930163	.	+	.	ID=gene-PKHYL_RS15570;Name=urtD;gbkey=Gene;gene=urtD;gene_biotype=pseudogene;locus_tag=PKHYL_RS15570;old_locus_tag=PKHYL_37990;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2929353	2930163	.	+	0	ID=cds-PKHYL_RS15570;Parent=gene-PKHYL_RS15570;Note=frameshifted;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtD;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443210.1;locus_tag=PKHYL_RS15570;product=urea ABC transporter ATP-binding protein UrtD;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2930297	2930995	.	+	.	ID=gene-PKHYL_RS15575;Name=urtE;gbkey=Gene;gene=urtE;gene_biotype=protein_coding;locus_tag=PKHYL_RS15575;old_locus_tag=PKHYL_38000
NZ_AP019516.1	Protein Homology	CDS	2930297	2930995	.	+	0	ID=cds-WP_071002818.1;Parent=gene-PKHYL_RS15575;Dbxref=Genbank:WP_071002818.1;Name=WP_071002818.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004647215.1;locus_tag=PKHYL_RS15575;product=urea ABC transporter ATP-binding subunit UrtE;protein_id=WP_071002818.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2931300	2932184	.	+	.	ID=gene-PKHYL_RS15580;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=PKHYL_RS15580;old_locus_tag=PKHYL_38010
NZ_AP019516.1	Protein Homology	CDS	2931300	2932184	.	+	0	ID=cds-WP_071002817.1;Parent=gene-PKHYL_RS15580;Dbxref=Genbank:WP_071002817.1;Name=WP_071002817.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281265.1;locus_tag=PKHYL_RS15580;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_071002817.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2932196	2932729	.	+	.	ID=gene-PKHYL_RS15585;Name=PKHYL_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15585;old_locus_tag=PKHYL_38020
NZ_AP019516.1	GeneMarkS-2+	CDS	2932196	2932729	.	+	0	ID=cds-WP_240365555.1;Parent=gene-PKHYL_RS15585;Dbxref=Genbank:WP_240365555.1;Name=WP_240365555.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15585;product=hypothetical protein;protein_id=WP_240365555.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2932986	2933443	.	+	.	ID=gene-PKHYL_RS15590;Name=thyA;end_range=2933443,.;gbkey=Gene;gene=thyA;gene_biotype=pseudogene;locus_tag=PKHYL_RS15590;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2932986	2933443	.	+	0	ID=cds-PKHYL_RS15590;Parent=gene-PKHYL_RS15590;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009265,GO:0004799;end_range=2933443,.;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: protein motif:HMM:NF012524.2;locus_tag=PKHYL_RS15590;partial=true;product=thymidylate synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2933506	2933613	.	+	.	ID=gene-PKHYL_RS15595;Name=PKHYL_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15595
NZ_AP019516.1	Protein Homology	CDS	2933506	2933613	.	+	0	ID=cds-WP_240365556.1;Parent=gene-PKHYL_RS15595;Dbxref=Genbank:WP_240365556.1;Name=WP_240365556.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012524.2;locus_tag=PKHYL_RS15595;product=thymidylate synthase;protein_id=WP_240365556.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2933656	2934480	.	+	.	ID=gene-PKHYL_RS15600;Name=PKHYL_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15600;old_locus_tag=PKHYL_38060
NZ_AP019516.1	GeneMarkS-2+	CDS	2933656	2934480	.	+	0	ID=cds-WP_240365557.1;Parent=gene-PKHYL_RS15600;Dbxref=Genbank:WP_240365557.1;Name=WP_240365557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15600;product=hypothetical protein;protein_id=WP_240365557.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2934890	2936002	.	+	.	ID=gene-PKHYL_RS15605;Name=PKHYL_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15605;old_locus_tag=PKHYL_38090
NZ_AP019516.1	GeneMarkS-2+	CDS	2934890	2936002	.	+	0	ID=cds-WP_240365558.1;Parent=gene-PKHYL_RS15605;Dbxref=Genbank:WP_240365558.1;Name=WP_240365558.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15605;product=hypothetical protein;protein_id=WP_240365558.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2935999	2936661	.	+	.	ID=gene-PKHYL_RS15610;Name=PKHYL_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15610;old_locus_tag=PKHYL_38100
NZ_AP019516.1	GeneMarkS-2+	CDS	2935999	2936661	.	+	0	ID=cds-WP_240365559.1;Parent=gene-PKHYL_RS15610;Dbxref=Genbank:WP_240365559.1;Name=WP_240365559.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15610;product=hypothetical protein;protein_id=WP_240365559.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2936663	2937001	.	+	.	ID=gene-PKHYL_RS15615;Name=PKHYL_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15615;old_locus_tag=PKHYL_38110
NZ_AP019516.1	Protein Homology	CDS	2936663	2937001	.	+	0	ID=cds-WP_240365560.1;Parent=gene-PKHYL_RS15615;Dbxref=Genbank:WP_240365560.1;Name=WP_240365560.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=PKHYL_RS15615;product=site-specific integrase;protein_id=WP_240365560.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2937090	2937344	.	+	.	ID=gene-PKHYL_RS15620;Name=PKHYL_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15620;old_locus_tag=PKHYL_38120
NZ_AP019516.1	GeneMarkS-2+	CDS	2937090	2937344	.	+	0	ID=cds-WP_240365561.1;Parent=gene-PKHYL_RS15620;Dbxref=Genbank:WP_240365561.1;Name=WP_240365561.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15620;product=hypothetical protein;protein_id=WP_240365561.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2937490	2938104	.	+	.	ID=gene-PKHYL_RS15625;Name=PKHYL_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15625;old_locus_tag=PKHYL_38130
NZ_AP019516.1	GeneMarkS-2+	CDS	2937490	2938104	.	+	0	ID=cds-WP_240365562.1;Parent=gene-PKHYL_RS15625;Dbxref=Genbank:WP_240365562.1;Name=WP_240365562.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15625;product=hypothetical protein;protein_id=WP_240365562.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2938451	2938717	.	+	.	ID=gene-PKHYL_RS15630;Name=PKHYL_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15630;old_locus_tag=PKHYL_38150
NZ_AP019516.1	GeneMarkS-2+	CDS	2938451	2938717	.	+	0	ID=cds-WP_240365563.1;Parent=gene-PKHYL_RS15630;Dbxref=Genbank:WP_240365563.1;Name=WP_240365563.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15630;product=hypothetical protein;protein_id=WP_240365563.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2938737	2939096	.	+	.	ID=gene-PKHYL_RS15635;Name=PKHYL_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15635;old_locus_tag=PKHYL_38160
NZ_AP019516.1	GeneMarkS-2+	CDS	2938737	2939096	.	+	0	ID=cds-WP_240365564.1;Parent=gene-PKHYL_RS15635;Dbxref=Genbank:WP_240365564.1;Name=WP_240365564.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15635;product=hypothetical protein;protein_id=WP_240365564.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2939156	2939449	.	+	.	ID=gene-PKHYL_RS15640;Name=PKHYL_RS15640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15640;old_locus_tag=PKHYL_38170
NZ_AP019516.1	GeneMarkS-2+	CDS	2939156	2939449	.	+	0	ID=cds-WP_240365565.1;Parent=gene-PKHYL_RS15640;Dbxref=Genbank:WP_240365565.1;Name=WP_240365565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15640;product=hypothetical protein;protein_id=WP_240365565.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2939574	2939957	.	+	.	ID=gene-PKHYL_RS15645;Name=PKHYL_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15645;old_locus_tag=PKHYL_38180
NZ_AP019516.1	GeneMarkS-2+	CDS	2939574	2939957	.	+	0	ID=cds-WP_240365566.1;Parent=gene-PKHYL_RS15645;Dbxref=Genbank:WP_240365566.1;Name=WP_240365566.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15645;product=hypothetical protein;protein_id=WP_240365566.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2940129	2940980	.	-	.	ID=gene-PKHYL_RS15650;Name=PKHYL_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15650;old_locus_tag=PKHYL_38190
NZ_AP019516.1	Protein Homology	CDS	2940129	2940980	.	-	0	ID=cds-WP_036600623.1;Parent=gene-PKHYL_RS15650;Dbxref=Genbank:WP_036600623.1;Name=WP_036600623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005232276.1;locus_tag=PKHYL_RS15650;product=thymidylate synthase;protein_id=WP_036600623.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2941371	2941730	.	-	.	ID=gene-PKHYL_RS15655;Name=PKHYL_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15655;old_locus_tag=PKHYL_38200
NZ_AP019516.1	GeneMarkS-2+	CDS	2941371	2941730	.	-	0	ID=cds-WP_240365567.1;Parent=gene-PKHYL_RS15655;Dbxref=Genbank:WP_240365567.1;Name=WP_240365567.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15655;product=hypothetical protein;protein_id=WP_240365567.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2941712	2942602	.	-	.	ID=gene-PKHYL_RS15660;Name=PKHYL_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15660;old_locus_tag=PKHYL_38210
NZ_AP019516.1	Protein Homology	CDS	2941712	2942602	.	-	0	ID=cds-WP_240365568.1;Parent=gene-PKHYL_RS15660;Dbxref=Genbank:WP_240365568.1;Name=WP_240365568.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=PKHYL_RS15660;product=MFS transporter;protein_id=WP_240365568.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2942605	2942883	.	-	.	ID=gene-PKHYL_RS15665;Name=PKHYL_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15665;old_locus_tag=PKHYL_38220
NZ_AP019516.1	Protein Homology	CDS	2942605	2942883	.	-	0	ID=cds-WP_240365569.1;Parent=gene-PKHYL_RS15665;Dbxref=Genbank:WP_240365569.1;Name=WP_240365569.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014818.2;locus_tag=PKHYL_RS15665;product=hypothetical protein;protein_id=WP_240365569.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2942876	2943091	.	-	.	ID=gene-PKHYL_RS15670;Name=PKHYL_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15670;old_locus_tag=PKHYL_38230
NZ_AP019516.1	Protein Homology	CDS	2942876	2943091	.	-	0	ID=cds-WP_240365570.1;Parent=gene-PKHYL_RS15670;Dbxref=Genbank:WP_240365570.1;Name=WP_240365570.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014818.2;locus_tag=PKHYL_RS15670;product=hypothetical protein;protein_id=WP_240365570.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2943088	2943612	.	-	.	ID=gene-PKHYL_RS15675;Name=PKHYL_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15675;old_locus_tag=PKHYL_38240
NZ_AP019516.1	Protein Homology	CDS	2943088	2943612	.	-	0	ID=cds-WP_240365571.1;Parent=gene-PKHYL_RS15675;Dbxref=Genbank:WP_240365571.1;Name=WP_240365571.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013293.2;locus_tag=PKHYL_RS15675;product=hypothetical protein;protein_id=WP_240365571.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2943760	2944137	.	-	.	ID=gene-PKHYL_RS15680;Name=PKHYL_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15680;old_locus_tag=PKHYL_38250
NZ_AP019516.1	Protein Homology	CDS	2943760	2944137	.	-	0	ID=cds-WP_240365572.1;Parent=gene-PKHYL_RS15680;Dbxref=Genbank:WP_240365572.1;Name=WP_240365572.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF007528.0;locus_tag=PKHYL_RS15680;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_240365572.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2944134	2944499	.	-	.	ID=gene-PKHYL_RS15685;Name=PKHYL_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15685;old_locus_tag=PKHYL_38260
NZ_AP019516.1	Protein Homology	CDS	2944134	2944499	.	-	0	ID=cds-WP_240365573.1;Parent=gene-PKHYL_RS15685;Dbxref=Genbank:WP_240365573.1;Name=WP_240365573.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013607.2;locus_tag=PKHYL_RS15685;product=hypothetical protein;protein_id=WP_240365573.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2944757	2945818	.	+	.	ID=gene-PKHYL_RS15690;Name=PKHYL_RS15690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15690;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2944757	2945818	.	+	0	ID=cds-PKHYL_RS15690;Parent=gene-PKHYL_RS15690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005253618.1;locus_tag=PKHYL_RS15690;product=ArsO family NAD(P)H-dependent flavin-containing monooxygenase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2945831	2946163	.	-	.	ID=gene-PKHYL_RS15695;Name=PKHYL_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15695;old_locus_tag=PKHYL_38280
NZ_AP019516.1	Protein Homology	CDS	2945831	2946163	.	-	0	ID=cds-WP_201564455.1;Parent=gene-PKHYL_RS15695;Dbxref=Genbank:WP_201564455.1;Name=WP_201564455.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812988.1;locus_tag=PKHYL_RS15695;product=YnfA family protein;protein_id=WP_201564455.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2946254	2946973	.	-	.	ID=gene-PKHYL_RS17830;Name=PKHYL_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17830;old_locus_tag=PKHYL_38290
NZ_AP019516.1	Protein Homology	CDS	2946254	2946973	.	-	0	ID=cds-WP_269778321.1;Parent=gene-PKHYL_RS17830;Dbxref=Genbank:WP_269778321.1;Name=WP_269778321.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019581.2;locus_tag=PKHYL_RS17830;product=amidohydrolase family protein;protein_id=WP_269778321.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2946889	2947503	.	-	.	ID=gene-PKHYL_RS17835;Name=PKHYL_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17835;old_locus_tag=PKHYL_38300
NZ_AP019516.1	GeneMarkS-2+	CDS	2946889	2947503	.	-	0	ID=cds-WP_269778191.1;Parent=gene-PKHYL_RS17835;Dbxref=Genbank:WP_269778191.1;Name=WP_269778191.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17835;product=hypothetical protein;protein_id=WP_269778191.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2947772	2948305	.	-	.	ID=gene-PKHYL_RS15705;Name=PKHYL_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15705;old_locus_tag=PKHYL_38310
NZ_AP019516.1	GeneMarkS-2+	CDS	2947772	2948305	.	-	0	ID=cds-WP_240365574.1;Parent=gene-PKHYL_RS15705;Dbxref=Genbank:WP_240365574.1;Name=WP_240365574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15705;product=hypothetical protein;protein_id=WP_240365574.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2948631	2949674	.	-	.	ID=gene-PKHYL_RS15710;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=PKHYL_RS15710;old_locus_tag=PKHYL_38330
NZ_AP019516.1	Protein Homology	CDS	2948631	2949674	.	-	0	ID=cds-WP_269778192.1;Parent=gene-PKHYL_RS15710;Dbxref=Genbank:WP_269778192.1;Name=WP_269778192.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF008241.0;locus_tag=PKHYL_RS15710;product=cytosine permease;protein_id=WP_269778192.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2949718	2949879	.	-	.	ID=gene-PKHYL_RS17840;Name=PKHYL_RS17840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS17840;partial=true;pseudo=true;start_range=.,2949718
NZ_AP019516.1	Protein Homology	CDS	2949718	2949879	.	-	0	ID=cds-PKHYL_RS17840;Parent=gene-PKHYL_RS17840;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014218.2;locus_tag=PKHYL_RS17840;partial=true;product=cytosine permease;pseudo=true;start_range=.,2949718;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2951216	2952652	.	-	.	ID=gene-PKHYL_RS15715;Name=merA;gbkey=Gene;gene=merA;gene_biotype=pseudogene;locus_tag=PKHYL_RS15715;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2951216	2952652	.	-	0	ID=cds-PKHYL_RS15715;Parent=gene-PKHYL_RS15715;Note=frameshifted;Ontology_term=GO:0016152;gbkey=CDS;gene=merA;go_function=mercury (II) reductase activity|0016152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008110852.1;locus_tag=PKHYL_RS15715;product=mercury(II) reductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2952672	2953019	.	-	.	ID=gene-PKHYL_RS15720;Name=merC;gbkey=Gene;gene=merC;gene_biotype=protein_coding;locus_tag=PKHYL_RS15720;old_locus_tag=PKHYL_38360
NZ_AP019516.1	Protein Homology	CDS	2952672	2953019	.	-	0	ID=cds-WP_237182785.1;Parent=gene-PKHYL_RS15720;Dbxref=Genbank:WP_237182785.1;Name=WP_237182785.1;gbkey=CDS;gene=merC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008110850.1;locus_tag=PKHYL_RS15720;product=organomercurial transporter MerC;protein_id=WP_237182785.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2953091	2953396	.	-	.	ID=gene-PKHYL_RS15725;Name=merP;gbkey=Gene;gene=merP;gene_biotype=protein_coding;locus_tag=PKHYL_RS15725
NZ_AP019516.1	Protein Homology	CDS	2953091	2953396	.	-	0	ID=cds-WP_240366553.1;Parent=gene-PKHYL_RS15725;Dbxref=Genbank:WP_240366553.1;Name=WP_240366553.1;Ontology_term=GO:0045340;gbkey=CDS;gene=merP;go_function=mercury ion binding|0045340||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008110847.1;locus_tag=PKHYL_RS15725;product=mercury resistance system periplasmic binding protein MerP;protein_id=WP_240366553.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2953421	2953778	.	-	.	ID=gene-PKHYL_RS15730;Name=PKHYL_RS15730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15730;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2953421	2953778	.	-	0	ID=cds-PKHYL_RS15730;Parent=gene-PKHYL_RS15730;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008110845.1;locus_tag=PKHYL_RS15730;product=mercuric transporter MerT family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2954055	2954324	.	-	.	ID=gene-PKHYL_RS15735;Name=PKHYL_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15735;old_locus_tag=PKHYL_38380
NZ_AP019516.1	Protein Homology	CDS	2954055	2954324	.	-	0	ID=cds-WP_240365575.1;Parent=gene-PKHYL_RS15735;Dbxref=Genbank:WP_240365575.1;Name=WP_240365575.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024803.2;locus_tag=PKHYL_RS15735;product=MerR family transcriptional regulator;protein_id=WP_240365575.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2954648	2955279	.	-	.	ID=gene-PKHYL_RS15740;Name=PKHYL_RS15740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15740;old_locus_tag=PKHYL_38390;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2954648	2955279	.	-	0	ID=cds-PKHYL_RS15740;Parent=gene-PKHYL_RS15740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443886.1;locus_tag=PKHYL_RS15740;product=recombinase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2955633	2955929	.	+	.	ID=gene-PKHYL_RS15745;Name=PKHYL_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15745;old_locus_tag=PKHYL_38400
NZ_AP019516.1	Protein Homology	CDS	2955633	2955929	.	+	0	ID=cds-WP_240365577.1;Parent=gene-PKHYL_RS15745;Dbxref=Genbank:WP_240365577.1;Name=WP_240365577.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039999.1;locus_tag=PKHYL_RS15745;product=DUF6122 family protein;protein_id=WP_240365577.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2956048	2956302	.	-	.	ID=gene-PKHYL_RS15750;Name=PKHYL_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15750;old_locus_tag=PKHYL_38410
NZ_AP019516.1	GeneMarkS-2+	CDS	2956048	2956302	.	-	0	ID=cds-WP_240365578.1;Parent=gene-PKHYL_RS15750;Dbxref=Genbank:WP_240365578.1;Name=WP_240365578.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15750;product=hypothetical protein;protein_id=WP_240365578.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2956329	2956661	.	-	.	ID=gene-PKHYL_RS15755;Name=PKHYL_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15755;old_locus_tag=PKHYL_38420
NZ_AP019516.1	GeneMarkS-2+	CDS	2956329	2956661	.	-	0	ID=cds-WP_240365579.1;Parent=gene-PKHYL_RS15755;Dbxref=Genbank:WP_240365579.1;Name=WP_240365579.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15755;product=hypothetical protein;protein_id=WP_240365579.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2956678	2957418	.	-	.	ID=gene-PKHYL_RS15760;Name=PKHYL_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15760;old_locus_tag=PKHYL_38430
NZ_AP019516.1	Protein Homology	CDS	2956678	2957418	.	-	0	ID=cds-WP_101204369.1;Parent=gene-PKHYL_RS15760;Dbxref=Genbank:WP_101204369.1;Name=WP_101204369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443909.1;locus_tag=PKHYL_RS15760;product=HupE/UreJ family protein;protein_id=WP_101204369.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2957679	2957958	.	+	.	ID=gene-PKHYL_RS15765;Name=PKHYL_RS15765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15765;old_locus_tag=PKHYL_38440;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2957679	2957958	.	+	0	ID=cds-PKHYL_RS15765;Parent=gene-PKHYL_RS15765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514090.1;locus_tag=PKHYL_RS15765;product=metal-sensing transcriptional repressor;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2957988	2959310	.	+	.	ID=gene-PKHYL_RS15770;Name=PKHYL_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15770;old_locus_tag=PKHYL_38450
NZ_AP019516.1	Protein Homology	CDS	2957988	2959310	.	+	0	ID=cds-WP_101204371.1;Parent=gene-PKHYL_RS15770;Dbxref=Genbank:WP_101204371.1;Name=WP_101204371.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020443907.1;locus_tag=PKHYL_RS15770;product=MFS transporter;protein_id=WP_101204371.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2959529	2960371	.	-	.	ID=gene-PKHYL_RS15775;Name=dmeF;gbkey=Gene;gene=dmeF;gene_biotype=protein_coding;locus_tag=PKHYL_RS15775;old_locus_tag=PKHYL_38470
NZ_AP019516.1	Protein Homology	CDS	2959529	2960371	.	-	0	ID=cds-WP_240365580.1;Parent=gene-PKHYL_RS15775;Dbxref=Genbank:WP_240365580.1;Name=WP_240365580.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=dmeF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF033827.1;locus_tag=PKHYL_RS15775;product=CDF family Co(II)/Ni(II) efflux transporter DmeF;protein_id=WP_240365580.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2960473	2960748	.	+	.	ID=gene-PKHYL_RS15780;Name=PKHYL_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15780;old_locus_tag=PKHYL_38480
NZ_AP019516.1	Protein Homology	CDS	2960473	2960748	.	+	0	ID=cds-WP_101204373.1;Parent=gene-PKHYL_RS15780;Dbxref=Genbank:WP_101204373.1;Name=WP_101204373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017412659.1;locus_tag=PKHYL_RS15780;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_101204373.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2961045	2961635	.	+	.	ID=gene-PKHYL_RS15785;Name=PKHYL_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15785;old_locus_tag=PKHYL_38490
NZ_AP019516.1	Protein Homology	CDS	2961045	2961635	.	+	0	ID=cds-WP_025646108.1;Parent=gene-PKHYL_RS15785;Dbxref=Genbank:WP_025646108.1;Name=WP_025646108.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394840.1;locus_tag=PKHYL_RS15785;product=recombinase family protein;protein_id=WP_025646108.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2961812	2962522	.	+	.	ID=gene-PKHYL_RS15790;Name=PKHYL_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15790;old_locus_tag=PKHYL_38500
NZ_AP019516.1	GeneMarkS-2+	CDS	2961812	2962522	.	+	0	ID=cds-WP_240365581.1;Parent=gene-PKHYL_RS15790;Dbxref=Genbank:WP_240365581.1;Name=WP_240365581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15790;product=hypothetical protein;protein_id=WP_240365581.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2962626	2963567	.	+	.	ID=gene-PKHYL_RS15795;Name=PKHYL_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15795;old_locus_tag=PKHYL_38510
NZ_AP019516.1	GeneMarkS-2+	CDS	2962626	2963567	.	+	0	ID=cds-WP_240365582.1;Parent=gene-PKHYL_RS15795;Dbxref=Genbank:WP_240365582.1;Name=WP_240365582.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15795;product=hypothetical protein;protein_id=WP_240365582.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2963584	2964192	.	+	.	ID=gene-PKHYL_RS15800;Name=PKHYL_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15800;old_locus_tag=PKHYL_38520
NZ_AP019516.1	GeneMarkS-2+	CDS	2963584	2964192	.	+	0	ID=cds-WP_240365583.1;Parent=gene-PKHYL_RS15800;Dbxref=Genbank:WP_240365583.1;Name=WP_240365583.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15800;product=hypothetical protein;protein_id=WP_240365583.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2964408	2966513	.	+	.	ID=gene-PKHYL_RS15805;Name=PKHYL_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15805;old_locus_tag=PKHYL_38540
NZ_AP019516.1	GeneMarkS-2+	CDS	2964408	2966513	.	+	0	ID=cds-WP_240365584.1;Parent=gene-PKHYL_RS15805;Dbxref=Genbank:WP_240365584.1;Name=WP_240365584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15805;product=hypothetical protein;protein_id=WP_240365584.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2966785	2967948	.	+	.	ID=gene-PKHYL_RS15810;Name=PKHYL_RS15810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15810;old_locus_tag=PKHYL_38560;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2966785	2967948	.	+	0	ID=cds-PKHYL_RS15810;Parent=gene-PKHYL_RS15810;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611943.1;locus_tag=PKHYL_RS15810;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2968131	2970556	.	+	.	ID=gene-PKHYL_RS15815;Name=PKHYL_RS15815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15815;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2968131	2970556	.	+	0	ID=cds-PKHYL_RS15815;Parent=gene-PKHYL_RS15815;Note=frameshifted;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394838.1;locus_tag=PKHYL_RS15815;product=DEAD/DEAH box helicase family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2970664	2972171	.	+	.	ID=gene-PKHYL_RS15820;Name=PKHYL_RS15820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15820;old_locus_tag=PKHYL_38590;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2970664	2972171	.	+	0	ID=cds-PKHYL_RS15820;Parent=gene-PKHYL_RS15820;Note=frameshifted;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008486744.1;locus_tag=PKHYL_RS15820;product=N-6 DNA methylase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2972164	2973510	.	+	.	ID=gene-PKHYL_RS15825;Name=PKHYL_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15825;old_locus_tag=PKHYL_38600
NZ_AP019516.1	Protein Homology	CDS	2972164	2973510	.	+	0	ID=cds-WP_240365585.1;Parent=gene-PKHYL_RS15825;Dbxref=Genbank:WP_240365585.1;Name=WP_240365585.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=PKHYL_RS15825;product=restriction endonuclease subunit S;protein_id=WP_240365585.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2973597	2973875	.	+	.	ID=gene-PKHYL_RS15830;Name=PKHYL_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15830;old_locus_tag=PKHYL_38610
NZ_AP019516.1	GeneMarkS-2+	CDS	2973597	2973875	.	+	0	ID=cds-WP_240365586.1;Parent=gene-PKHYL_RS15830;Dbxref=Genbank:WP_240365586.1;Name=WP_240365586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15830;product=hypothetical protein;protein_id=WP_240365586.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2974228	2974464	.	+	.	ID=gene-PKHYL_RS15835;Name=PKHYL_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15835;old_locus_tag=PKHYL_38620
NZ_AP019516.1	Protein Homology	CDS	2974228	2974464	.	+	0	ID=cds-WP_269778322.1;Parent=gene-PKHYL_RS15835;Dbxref=Genbank:WP_269778322.1;Name=WP_269778322.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03284.1;locus_tag=PKHYL_RS15835;product=thymidylate synthase;protein_id=WP_269778322.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2974545	2975134	.	+	.	ID=gene-PKHYL_RS15840;Name=PKHYL_RS15840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15840;old_locus_tag=PKHYL_38630;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2974545	2975134	.	+	0	ID=cds-PKHYL_RS15840;Parent=gene-PKHYL_RS15840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197916.1;locus_tag=PKHYL_RS15840;product=dihydrofolate reductase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2975234	2977076	.	-	.	ID=gene-PKHYL_RS17845;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=pseudogene;locus_tag=PKHYL_RS17845;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2975234	2977076	.	-	0	ID=cds-PKHYL_RS17845;Parent=gene-PKHYL_RS17845;Note=frameshifted;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041753276.1;locus_tag=PKHYL_RS17845;product=excinuclease ABC subunit UvrC;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2977221	2978756	.	-	.	ID=gene-PKHYL_RS15860;Name=PKHYL_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15860;old_locus_tag=PKHYL_38670
NZ_AP019516.1	Protein Homology	CDS	2977221	2978756	.	-	0	ID=cds-WP_240365588.1;Parent=gene-PKHYL_RS15860;Dbxref=Genbank:WP_240365588.1;Name=WP_240365588.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023268.2;locus_tag=PKHYL_RS15860;product=DUF3360 family protein;protein_id=WP_240365588.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2979258	2979819	.	+	.	ID=gene-PKHYL_RS15865;Name=PKHYL_RS15865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15865;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2979258	2979819	.	+	0	ID=cds-PKHYL_RS15865;Parent=gene-PKHYL_RS15865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281270.1;locus_tag=PKHYL_RS15865;product=DUF4442 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2980092	2980511	.	-	.	ID=gene-PKHYL_RS15870;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=PKHYL_RS15870;old_locus_tag=PKHYL_38700
NZ_AP019516.1	Protein Homology	CDS	2980092	2980511	.	-	0	ID=cds-WP_075106449.1;Parent=gene-PKHYL_RS15870;Dbxref=Genbank:WP_075106449.1;Name=WP_075106449.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514626.1;locus_tag=PKHYL_RS15870;product=50S ribosomal protein L19;protein_id=WP_075106449.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2980717	2981481	.	-	.	ID=gene-PKHYL_RS15875;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=PKHYL_RS15875;old_locus_tag=PKHYL_38710
NZ_AP019516.1	Protein Homology	CDS	2980717	2981481	.	-	0	ID=cds-WP_071002810.1;Parent=gene-PKHYL_RS15875;Dbxref=Genbank:WP_071002810.1;Name=WP_071002810.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N(1))-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444427.1;locus_tag=PKHYL_RS15875;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_071002810.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2981587	2982120	.	-	.	ID=gene-PKHYL_RS15880;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=PKHYL_RS15880;old_locus_tag=PKHYL_38720
NZ_AP019516.1	Protein Homology	CDS	2981587	2982120	.	-	0	ID=cds-WP_071002809.1;Parent=gene-PKHYL_RS15880;Dbxref=Genbank:WP_071002809.1;Name=WP_071002809.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514628.1;locus_tag=PKHYL_RS15880;product=ribosome maturation factor RimM;protein_id=WP_071002809.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2982286	2982555	.	-	.	ID=gene-PKHYL_RS15885;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=PKHYL_RS15885;old_locus_tag=PKHYL_38730
NZ_AP019516.1	Protein Homology	CDS	2982286	2982555	.	-	0	ID=cds-WP_021812802.1;Parent=gene-PKHYL_RS15885;Dbxref=Genbank:WP_021812802.1;Name=WP_021812802.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281274.1;locus_tag=PKHYL_RS15885;product=30S ribosomal protein S16;protein_id=WP_021812802.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2982991	2984474	.	+	.	ID=gene-PKHYL_RS15890;Name=PKHYL_RS15890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15890;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2982991	2984474	.	+	0	ID=cds-PKHYL_RS15890;Parent=gene-PKHYL_RS15890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197932.1;locus_tag=PKHYL_RS15890;product=ATP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2984508	2984687	.	-	.	ID=gene-PKHYL_RS15895;Name=PKHYL_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15895;old_locus_tag=PKHYL_38760
NZ_AP019516.1	GeneMarkS-2+	CDS	2984508	2984687	.	-	0	ID=cds-WP_058023511.1;Parent=gene-PKHYL_RS15895;Dbxref=Genbank:WP_058023511.1;Name=WP_058023511.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15895;product=hypothetical protein;protein_id=WP_058023511.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2984819	2986505	.	-	.	ID=gene-PKHYL_RS15900;Name=PKHYL_RS15900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS15900;old_locus_tag=PKHYL_38770;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2984819	2986505	.	-	0	ID=cds-PKHYL_RS15900;Parent=gene-PKHYL_RS15900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197937.1;locus_tag=PKHYL_RS15900;product=ATP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2986828	2987478	.	-	.	ID=gene-PKHYL_RS15905;Name=PKHYL_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15905;old_locus_tag=PKHYL_38790
NZ_AP019516.1	Protein Homology	CDS	2986828	2987478	.	-	0	ID=cds-WP_240366555.1;Parent=gene-PKHYL_RS15905;Dbxref=Genbank:WP_240366555.1;Name=WP_240366555.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281277.1;locus_tag=PKHYL_RS15905;product=winged helix-turn-helix domain-containing protein;protein_id=WP_240366555.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2988152	2988568	.	-	.	ID=gene-PKHYL_RS15910;Name=PKHYL_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15910;old_locus_tag=PKHYL_38800
NZ_AP019516.1	Protein Homology	CDS	2988152	2988568	.	-	0	ID=cds-WP_071002804.1;Parent=gene-PKHYL_RS15910;Dbxref=Genbank:WP_071002804.1;Name=WP_071002804.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444433.1;locus_tag=PKHYL_RS15910;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_071002804.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2988685	2990118	.	-	.	ID=gene-PKHYL_RS15915;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=PKHYL_RS15915;old_locus_tag=PKHYL_38810
NZ_AP019516.1	Protein Homology	CDS	2988685	2990118	.	-	0	ID=cds-WP_058023507.1;Parent=gene-PKHYL_RS15915;Dbxref=Genbank:WP_058023507.1;Name=WP_058023507.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281279.1;locus_tag=PKHYL_RS15915;product=F0F1 ATP synthase subunit beta;protein_id=WP_058023507.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2990157	2991038	.	-	.	ID=gene-PKHYL_RS15920;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=PKHYL_RS15920;old_locus_tag=PKHYL_38820
NZ_AP019516.1	Protein Homology	CDS	2990157	2991038	.	-	0	ID=cds-WP_071002802.1;Parent=gene-PKHYL_RS15920;Dbxref=Genbank:WP_071002802.1;Name=WP_071002802.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281280.1;locus_tag=PKHYL_RS15920;product=F0F1 ATP synthase subunit gamma;protein_id=WP_071002802.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2991248	2992792	.	-	.	ID=gene-PKHYL_RS15925;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=PKHYL_RS15925;old_locus_tag=PKHYL_38830
NZ_AP019516.1	Protein Homology	CDS	2991248	2992792	.	-	0	ID=cds-WP_071002801.1;Parent=gene-PKHYL_RS15925;Dbxref=Genbank:WP_071002801.1;Name=WP_071002801.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997344.1;locus_tag=PKHYL_RS15925;product=F0F1 ATP synthase subunit alpha;protein_id=WP_071002801.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2992886	2993509	.	-	.	ID=gene-PKHYL_RS15930;Name=PKHYL_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15930;old_locus_tag=PKHYL_38840
NZ_AP019516.1	Protein Homology	CDS	2992886	2993509	.	-	0	ID=cds-WP_071002800.1;Parent=gene-PKHYL_RS15930;Dbxref=Genbank:WP_071002800.1;Name=WP_071002800.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514636.1;locus_tag=PKHYL_RS15930;product=F0F1 ATP synthase subunit delta;protein_id=WP_071002800.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2993523	2993993	.	-	.	ID=gene-PKHYL_RS15935;Name=PKHYL_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15935;old_locus_tag=PKHYL_38850
NZ_AP019516.1	Protein Homology	CDS	2993523	2993993	.	-	0	ID=cds-WP_071002799.1;Parent=gene-PKHYL_RS15935;Dbxref=Genbank:WP_071002799.1;Name=WP_071002799.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514637.1;locus_tag=PKHYL_RS15935;product=F0F1 ATP synthase subunit B;protein_id=WP_071002799.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2994111	2994359	.	-	.	ID=gene-PKHYL_RS15940;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=PKHYL_RS15940;old_locus_tag=PKHYL_38860
NZ_AP019516.1	Protein Homology	CDS	2994111	2994359	.	-	0	ID=cds-WP_010197960.1;Parent=gene-PKHYL_RS15940;Dbxref=Genbank:WP_010197960.1;Name=WP_010197960.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197960.1;locus_tag=PKHYL_RS15940;product=F0F1 ATP synthase subunit C;protein_id=WP_010197960.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	2994393	2995258	.	-	.	ID=gene-PKHYL_RS15945;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=pseudogene;locus_tag=PKHYL_RS15945;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	2994393	2995258	.	-	0	ID=cds-PKHYL_RS15945;Parent=gene-PKHYL_RS15945;Note=frameshifted;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281284.1;locus_tag=PKHYL_RS15945;product=F0F1 ATP synthase subunit A;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	2995940	2996338	.	-	.	ID=gene-PKHYL_RS15950;Name=PKHYL_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15950;old_locus_tag=PKHYL_38890
NZ_AP019516.1	Protein Homology	CDS	2995940	2996338	.	-	0	ID=cds-WP_071002798.1;Parent=gene-PKHYL_RS15950;Dbxref=Genbank:WP_071002798.1;Name=WP_071002798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444435.1;locus_tag=PKHYL_RS15950;product=ATP synthase subunit I;protein_id=WP_071002798.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2996625	2996972	.	-	.	ID=gene-PKHYL_RS15955;Name=PKHYL_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15955;old_locus_tag=PKHYL_38900
NZ_AP019516.1	GeneMarkS-2+	CDS	2996625	2996972	.	-	0	ID=cds-WP_240365589.1;Parent=gene-PKHYL_RS15955;Dbxref=Genbank:WP_240365589.1;Name=WP_240365589.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15955;product=hypothetical protein;protein_id=WP_240365589.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2996957	2997505	.	-	.	ID=gene-PKHYL_RS15960;Name=PKHYL_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15960;old_locus_tag=PKHYL_38910
NZ_AP019516.1	Protein Homology	CDS	2996957	2997505	.	-	0	ID=cds-WP_240365590.1;Parent=gene-PKHYL_RS15960;Dbxref=Genbank:WP_240365590.1;Name=WP_240365590.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013465.2;locus_tag=PKHYL_RS15960;product=zinc ABC transporter substrate-binding protein;protein_id=WP_240365590.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2997706	2997861	.	+	.	ID=gene-PKHYL_RS15965;Name=PKHYL_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15965
NZ_AP019516.1	GeneMarkS-2+	CDS	2997706	2997861	.	+	0	ID=cds-WP_240365591.1;Parent=gene-PKHYL_RS15965;Dbxref=Genbank:WP_240365591.1;Name=WP_240365591.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15965;product=hypothetical protein;protein_id=WP_240365591.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2997831	2998043	.	+	.	ID=gene-PKHYL_RS15970;Name=PKHYL_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15970;old_locus_tag=PKHYL_38920
NZ_AP019516.1	GeneMarkS-2+	CDS	2997831	2998043	.	+	0	ID=cds-WP_240365592.1;Parent=gene-PKHYL_RS15970;Dbxref=Genbank:WP_240365592.1;Name=WP_240365592.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15970;product=hypothetical protein;protein_id=WP_240365592.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2998065	2998283	.	+	.	ID=gene-PKHYL_RS15975;Name=PKHYL_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15975
NZ_AP019516.1	GeneMarkS-2+	CDS	2998065	2998283	.	+	0	ID=cds-WP_240365593.1;Parent=gene-PKHYL_RS15975;Dbxref=Genbank:WP_240365593.1;Name=WP_240365593.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS15975;product=hypothetical protein;protein_id=WP_240365593.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2998421	2999053	.	+	.	ID=gene-PKHYL_RS15980;Name=PKHYL_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15980;old_locus_tag=PKHYL_38930
NZ_AP019516.1	Protein Homology	CDS	2998421	2999053	.	+	0	ID=cds-WP_240365594.1;Parent=gene-PKHYL_RS15980;Dbxref=Genbank:WP_240365594.1;Name=WP_240365594.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=PKHYL_RS15980;product=metal ABC transporter ATP-binding protein;protein_id=WP_240365594.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	2999301	3000116	.	+	.	ID=gene-PKHYL_RS15985;Name=PKHYL_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15985;old_locus_tag=PKHYL_38950
NZ_AP019516.1	Protein Homology	CDS	2999301	3000116	.	+	0	ID=cds-WP_071002796.1;Parent=gene-PKHYL_RS15985;Dbxref=Genbank:WP_071002796.1;Name=WP_071002796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005001670.1;locus_tag=PKHYL_RS15985;product=metal ABC transporter permease;protein_id=WP_071002796.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3000642	3001484	.	+	.	ID=gene-PKHYL_RS15990;Name=PKHYL_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS15990;old_locus_tag=PKHYL_38960
NZ_AP019516.1	Protein Homology	CDS	3000642	3001484	.	+	0	ID=cds-WP_240365595.1;Parent=gene-PKHYL_RS15990;Dbxref=Genbank:WP_240365595.1;Name=WP_240365595.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444439.1;locus_tag=PKHYL_RS15990;product=metallophosphoesterase;protein_id=WP_240365595.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3001958	3002395	.	+	.	ID=gene-PKHYL_RS15995;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=PKHYL_RS15995;old_locus_tag=PKHYL_38970
NZ_AP019516.1	Protein Homology	CDS	3001958	3002395	.	+	0	ID=cds-WP_071002794.1;Parent=gene-PKHYL_RS15995;Dbxref=Genbank:WP_071002794.1;Name=WP_071002794.1;Ontology_term=GO:0006355,GO:0019899;gbkey=CDS;gene=dksA;go_function=enzyme binding|0019899||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514645.1;locus_tag=PKHYL_RS15995;product=RNA polymerase-binding protein DksA;protein_id=WP_071002794.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3002633	3003617	.	+	.	ID=gene-PKHYL_RS16000;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=pseudogene;locus_tag=PKHYL_RS16000;old_locus_tag=PKHYL_38980;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3002633	3003617	.	+	0	ID=cds-PKHYL_RS16000;Parent=gene-PKHYL_RS16000;Note=frameshifted;Ontology_term=GO:0043039,GO:0004812;gbkey=CDS;gene=gluQRS;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514646.1;locus_tag=PKHYL_RS16000;product=tRNA glutamyl-Q(34) synthetase GluQRS;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3003724	3004386	.	-	.	ID=gene-PKHYL_RS16005;Name=PKHYL_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16005;old_locus_tag=PKHYL_38990
NZ_AP019516.1	Protein Homology	CDS	3003724	3004386	.	-	0	ID=cds-WP_240365596.1;Parent=gene-PKHYL_RS16005;Dbxref=Genbank:WP_240365596.1;Name=WP_240365596.1;Ontology_term=GO:0051301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: protein motif:HMM:NF013279.2;locus_tag=PKHYL_RS16005;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_240365596.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3004304	3004705	.	-	.	ID=gene-PKHYL_RS16010;Name=PKHYL_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16010;old_locus_tag=PKHYL_39000
NZ_AP019516.1	Protein Homology	CDS	3004304	3004705	.	-	0	ID=cds-WP_240365597.1;Parent=gene-PKHYL_RS16010;Dbxref=Genbank:WP_240365597.1;Name=WP_240365597.1;Ontology_term=GO:0051301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: protein motif:HMM:NF013279.2;locus_tag=PKHYL_RS16010;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_240365597.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3004702	3004920	.	-	.	ID=gene-PKHYL_RS16015;Name=PKHYL_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16015
NZ_AP019516.1	GeneMarkS-2+	CDS	3004702	3004920	.	-	0	ID=cds-WP_240365598.1;Parent=gene-PKHYL_RS16015;Dbxref=Genbank:WP_240365598.1;Name=WP_240365598.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16015;product=hypothetical protein;protein_id=WP_240365598.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3005210	3006643	.	-	.	ID=gene-PKHYL_RS16020;Name=murD;gbkey=Gene;gene=murD;gene_biotype=pseudogene;locus_tag=PKHYL_RS16020;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3005210	3006643	.	-	0	ID=cds-PKHYL_RS16020;Parent=gene-PKHYL_RS16020;Note=frameshifted;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281294.1;locus_tag=PKHYL_RS16020;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3007312	3008812	.	+	.	ID=gene-PKHYL_RS16025;Name=PKHYL_RS16025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16025;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3007312	3008812	.	+	0	ID=cds-PKHYL_RS16025;Parent=gene-PKHYL_RS16025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514649.1;locus_tag=PKHYL_RS16025;product=SulP family inorganic anion transporter;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3008993	3009673	.	+	.	ID=gene-PKHYL_RS16030;Name=PKHYL_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16030;old_locus_tag=PKHYL_39060
NZ_AP019516.1	GeneMarkS-2+	CDS	3008993	3009673	.	+	0	ID=cds-WP_240365599.1;Parent=gene-PKHYL_RS16030;Dbxref=Genbank:WP_240365599.1;Name=WP_240365599.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16030;product=universal stress protein;protein_id=WP_240365599.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3010309	3010646	.	+	.	ID=gene-PKHYL_RS16035;Name=PKHYL_RS16035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16035;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3010309	3010646	.	+	0	ID=cds-PKHYL_RS16035;Parent=gene-PKHYL_RS16035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004997399.1;locus_tag=PKHYL_RS16035;product=P-II family nitrogen regulator;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3010828	3012015	.	+	.	ID=gene-PKHYL_RS16040;Name=PKHYL_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16040;old_locus_tag=PKHYL_39090
NZ_AP019516.1	Protein Homology	CDS	3010828	3012015	.	+	0	ID=cds-WP_240365600.1;Parent=gene-PKHYL_RS16040;Dbxref=Genbank:WP_240365600.1;Name=WP_240365600.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03644.1;locus_tag=PKHYL_RS16040;product=ammonium transporter;protein_id=WP_240365600.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3012198	3012593	.	-	.	ID=gene-PKHYL_RS16045;Name=PKHYL_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16045;old_locus_tag=PKHYL_39100
NZ_AP019516.1	Protein Homology	CDS	3012198	3012593	.	-	0	ID=cds-WP_240365601.1;Parent=gene-PKHYL_RS16045;Dbxref=Genbank:WP_240365601.1;Name=WP_240365601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514653.1;locus_tag=PKHYL_RS16045;product=DUF2147 domain-containing protein;protein_id=WP_240365601.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3012856	3013119	.	-	.	ID=gene-PKHYL_RS16050;Name=PKHYL_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16050;old_locus_tag=PKHYL_39110
NZ_AP019516.1	Protein Homology	CDS	3012856	3013119	.	-	0	ID=cds-WP_071002788.1;Parent=gene-PKHYL_RS16050;Dbxref=Genbank:WP_071002788.1;Name=WP_071002788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281300.1;locus_tag=PKHYL_RS16050;product=hypothetical protein;protein_id=WP_071002788.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3013251	3013880	.	-	.	ID=gene-PKHYL_RS16055;Name=PKHYL_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16055;old_locus_tag=PKHYL_39120
NZ_AP019516.1	Protein Homology	CDS	3013251	3013880	.	-	0	ID=cds-WP_240365602.1;Parent=gene-PKHYL_RS16055;Dbxref=Genbank:WP_240365602.1;Name=WP_240365602.1;Ontology_term=GO:0003676,GO:0016787,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013395.2;locus_tag=PKHYL_RS16055;product=DNA/RNA non-specific endonuclease;protein_id=WP_240365602.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3014196	3014286	.	+	.	ID=gene-PKHYL_RS16060;Name=PKHYL_RS16060;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS16060;old_locus_tag=PKHYL_t00410
NZ_AP019516.1	tRNAscan-SE	tRNA	3014196	3014286	.	+	.	ID=rna-PKHYL_RS16060;Parent=gene-PKHYL_RS16060;anticodon=(pos:3014230..3014232);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16060;product=tRNA-Ser
NZ_AP019516.1	tRNAscan-SE	exon	3014196	3014286	.	+	.	ID=exon-PKHYL_RS16060-1;Parent=rna-PKHYL_RS16060;anticodon=(pos:3014230..3014232);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16060;product=tRNA-Ser
NZ_AP019516.1	RefSeq	gene	3015067	3015369	.	-	.	ID=gene-PKHYL_RS16065;Name=PKHYL_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16065;old_locus_tag=PKHYL_39130
NZ_AP019516.1	GeneMarkS-2+	CDS	3015067	3015369	.	-	0	ID=cds-WP_071002761.1;Parent=gene-PKHYL_RS16065;Dbxref=Genbank:WP_071002761.1;Name=WP_071002761.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16065;product=hypothetical protein;protein_id=WP_071002761.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3015726	3016508	.	+	.	ID=gene-PKHYL_RS16070;Name=PKHYL_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16070;old_locus_tag=PKHYL_39140
NZ_AP019516.1	Protein Homology	CDS	3015726	3016508	.	+	0	ID=cds-WP_071002760.1;Parent=gene-PKHYL_RS16070;Dbxref=Genbank:WP_071002760.1;Name=WP_071002760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394959.1;locus_tag=PKHYL_RS16070;product=YdcF family protein;protein_id=WP_071002760.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3016544	3017494	.	-	.	ID=gene-PKHYL_RS16075;Name=PKHYL_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16075;old_locus_tag=PKHYL_39150
NZ_AP019516.1	Protein Homology	CDS	3016544	3017494	.	-	0	ID=cds-WP_071003737.1;Parent=gene-PKHYL_RS16075;Dbxref=Genbank:WP_071003737.1;Name=WP_071003737.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281304.1;locus_tag=PKHYL_RS16075;product=methyltransferase domain-containing protein;protein_id=WP_071003737.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3017623	3018741	.	-	.	ID=gene-PKHYL_RS16080;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=PKHYL_RS16080;old_locus_tag=PKHYL_39160
NZ_AP019516.1	Protein Homology	CDS	3017623	3018741	.	-	0	ID=cds-WP_071002759.1;Parent=gene-PKHYL_RS16080;Dbxref=Genbank:WP_071002759.1;Name=WP_071002759.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011959433.1;locus_tag=PKHYL_RS16080;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_071002759.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3018745	3019722	.	-	.	ID=gene-PKHYL_RS16085;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=PKHYL_RS16085;old_locus_tag=PKHYL_39170
NZ_AP019516.1	Protein Homology	CDS	3018745	3019722	.	-	0	ID=cds-WP_240365603.1;Parent=gene-PKHYL_RS16085;Dbxref=Genbank:WP_240365603.1;Name=WP_240365603.1;Ontology_term=GO:0009252,GO:0047480;gbkey=CDS;gene=murF;go_function=UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: protein motif:HMM:TIGR01143.1;locus_tag=PKHYL_RS16085;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_240365603.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3019719	3020192	.	-	.	ID=gene-PKHYL_RS16090;Name=PKHYL_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16090;old_locus_tag=PKHYL_39180
NZ_AP019516.1	Protein Homology	CDS	3019719	3020192	.	-	0	ID=cds-WP_240365604.1;Parent=gene-PKHYL_RS16090;Dbxref=Genbank:WP_240365604.1;Name=WP_240365604.1;Ontology_term=GO:0009058,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF013396.2;locus_tag=PKHYL_RS16090;product=Mur ligase domain-containing protein;protein_id=WP_240365604.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3020276	3022031	.	-	.	ID=gene-PKHYL_RS16095;Name=PKHYL_RS16095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16095;old_locus_tag=PKHYL_39190;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3020276	3022031	.	-	0	ID=cds-PKHYL_RS16095;Parent=gene-PKHYL_RS16095;Note=frameshifted;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200548.1;locus_tag=PKHYL_RS16095;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3022099	3023043	.	-	.	ID=gene-PKHYL_RS16100;Name=PKHYL_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16100;old_locus_tag=PKHYL_39210
NZ_AP019516.1	Protein Homology	CDS	3022099	3023043	.	-	0	ID=cds-WP_240365605.1;Parent=gene-PKHYL_RS16100;Dbxref=Genbank:WP_240365605.1;Name=WP_240365605.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013100.2;locus_tag=PKHYL_RS16100;product=penicillin-binding protein 2;protein_id=WP_240365605.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3023040	3023957	.	-	.	ID=gene-PKHYL_RS16105;Name=PKHYL_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16105;old_locus_tag=PKHYL_39220
NZ_AP019516.1	Protein Homology	CDS	3023040	3023957	.	-	0	ID=cds-WP_240365606.1;Parent=gene-PKHYL_RS16105;Dbxref=Genbank:WP_240365606.1;Name=WP_240365606.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015662.2;locus_tag=PKHYL_RS16105;product=hypothetical protein;protein_id=WP_240365606.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3024194	3024658	.	-	.	ID=gene-PKHYL_RS16110;Name=PKHYL_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16110;old_locus_tag=PKHYL_39230
NZ_AP019516.1	Protein Homology	CDS	3024194	3024658	.	-	0	ID=cds-WP_240365607.1;Parent=gene-PKHYL_RS16110;Dbxref=Genbank:WP_240365607.1;Name=WP_240365607.1;Ontology_term=GO:0051301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200544.1;locus_tag=PKHYL_RS16110;product=cell division protein FtsL;protein_id=WP_240365607.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3024673	3024831	.	+	.	ID=gene-PKHYL_RS16115;Name=PKHYL_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16115
NZ_AP019516.1	GeneMarkS-2+	CDS	3024673	3024831	.	+	0	ID=cds-WP_167669394.1;Parent=gene-PKHYL_RS16115;Dbxref=Genbank:WP_167669394.1;Name=WP_167669394.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16115;product=hypothetical protein;protein_id=WP_167669394.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3025074	3025946	.	-	.	ID=gene-PKHYL_RS16120;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=PKHYL_RS16120;old_locus_tag=PKHYL_39240
NZ_AP019516.1	Protein Homology	CDS	3025074	3025946	.	-	0	ID=cds-WP_240366556.1;Parent=gene-PKHYL_RS16120;Dbxref=Genbank:WP_240366556.1;Name=WP_240366556.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: protein motif:HMM:TIGR00006.1;locus_tag=PKHYL_RS16120;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_240366556.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3025936	3026211	.	-	.	ID=gene-PKHYL_RS16125;Name=PKHYL_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16125;old_locus_tag=PKHYL_39250
NZ_AP019516.1	GeneMarkS-2+	CDS	3025936	3026211	.	-	0	ID=cds-WP_240365608.1;Parent=gene-PKHYL_RS16125;Dbxref=Genbank:WP_240365608.1;Name=WP_240365608.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16125;product=hypothetical protein;protein_id=WP_240365608.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3026459	3027982	.	+	.	ID=gene-PKHYL_RS16130;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=pseudogene;locus_tag=PKHYL_RS16130;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3026459	3027982	.	+	0	ID=cds-PKHYL_RS16130;Parent=gene-PKHYL_RS16130;Note=frameshifted;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281311.1;locus_tag=PKHYL_RS16130;product=glutamate--tRNA ligase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3028097	3028414	.	+	.	ID=gene-PKHYL_RS16135;Name=PKHYL_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16135;old_locus_tag=PKHYL_39280
NZ_AP019516.1	GeneMarkS-2+	CDS	3028097	3028414	.	+	0	ID=cds-WP_071002753.1;Parent=gene-PKHYL_RS16135;Dbxref=Genbank:WP_071002753.1;Name=WP_071002753.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16135;product=hypothetical protein;protein_id=WP_071002753.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3029011	3029086	.	+	.	ID=gene-PKHYL_RS16140;Name=PKHYL_RS16140;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS16140;old_locus_tag=PKHYL_t00420
NZ_AP019516.1	tRNAscan-SE	tRNA	3029011	3029086	.	+	.	ID=rna-PKHYL_RS16140;Parent=gene-PKHYL_RS16140;anticodon=(pos:3029044..3029046);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16140;product=tRNA-Ala
NZ_AP019516.1	tRNAscan-SE	exon	3029011	3029086	.	+	.	ID=exon-PKHYL_RS16140-1;Parent=rna-PKHYL_RS16140;anticodon=(pos:3029044..3029046);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16140;product=tRNA-Ala
NZ_AP019516.1	RefSeq	gene	3029247	3029321	.	+	.	ID=gene-PKHYL_RS16145;Name=PKHYL_RS16145;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS16145;old_locus_tag=PKHYL_t00430
NZ_AP019516.1	tRNAscan-SE	tRNA	3029247	3029321	.	+	.	ID=rna-PKHYL_RS16145;Parent=gene-PKHYL_RS16145;anticodon=(pos:3029281..3029283);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16145;product=tRNA-Glu
NZ_AP019516.1	tRNAscan-SE	exon	3029247	3029321	.	+	.	ID=exon-PKHYL_RS16145-1;Parent=rna-PKHYL_RS16145;anticodon=(pos:3029281..3029283);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16145;product=tRNA-Glu
NZ_AP019516.1	RefSeq	gene	3029590	3029820	.	+	.	ID=gene-PKHYL_RS17850;Name=PKHYL_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17850;old_locus_tag=PKHYL_39290
NZ_AP019516.1	Protein Homology	CDS	3029590	3029820	.	+	0	ID=cds-WP_269778193.1;Parent=gene-PKHYL_RS17850;Dbxref=Genbank:WP_269778193.1;Name=WP_269778193.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: protein motif:HMM:NF013933.2;locus_tag=PKHYL_RS17850;product=LysE family transporter;protein_id=WP_269778193.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3029810	3030244	.	+	.	ID=gene-PKHYL_RS16150;Name=PKHYL_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16150;old_locus_tag=PKHYL_39300
NZ_AP019516.1	Protein Homology	CDS	3029810	3030244	.	+	0	ID=cds-WP_269778194.1;Parent=gene-PKHYL_RS16150;Dbxref=Genbank:WP_269778194.1;Name=WP_269778194.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013933.2;locus_tag=PKHYL_RS16150;product=LysE family translocator;protein_id=WP_269778194.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3030400	3030747	.	+	.	ID=gene-PKHYL_RS17855;Name=PKHYL_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17855;old_locus_tag=PKHYL_39310
NZ_AP019516.1	GeneMarkS-2+	CDS	3030400	3030747	.	+	0	ID=cds-WP_269778195.1;Parent=gene-PKHYL_RS17855;Dbxref=Genbank:WP_269778195.1;Name=WP_269778195.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17855;product=nucleotidyltransferase domain-containing protein;protein_id=WP_269778195.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3030871	3031173	.	+	.	ID=gene-PKHYL_RS17860;Name=PKHYL_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17860;old_locus_tag=PKHYL_39320
NZ_AP019516.1	Protein Homology	CDS	3030871	3031173	.	+	0	ID=cds-WP_269778196.1;Parent=gene-PKHYL_RS17860;Dbxref=Genbank:WP_269778196.1;Name=WP_269778196.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021631.2;locus_tag=PKHYL_RS17860;product=nucleotidyltransferase domain-containing protein;protein_id=WP_269778196.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3031200	3031706	.	+	.	ID=gene-PKHYL_RS16160;Name=PKHYL_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16160;old_locus_tag=PKHYL_39330
NZ_AP019516.1	Protein Homology	CDS	3031200	3031706	.	+	0	ID=cds-WP_240365609.1;Parent=gene-PKHYL_RS16160;Dbxref=Genbank:WP_240365609.1;Name=WP_240365609.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021631.2;locus_tag=PKHYL_RS16160;product=nucleotidyltransferase domain-containing protein;protein_id=WP_240365609.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3031739	3031924	.	+	.	ID=gene-PKHYL_RS16165;Name=PKHYL_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16165;old_locus_tag=PKHYL_39340
NZ_AP019516.1	GeneMarkS-2+	CDS	3031739	3031924	.	+	0	ID=cds-WP_240365610.1;Parent=gene-PKHYL_RS16165;Dbxref=Genbank:WP_240365610.1;Name=WP_240365610.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16165;product=hypothetical protein;protein_id=WP_240365610.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3031921	3032337	.	+	.	ID=gene-PKHYL_RS16170;Name=PKHYL_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16170;old_locus_tag=PKHYL_39350
NZ_AP019516.1	GeneMarkS-2+	CDS	3031921	3032337	.	+	0	ID=cds-WP_240365611.1;Parent=gene-PKHYL_RS16170;Dbxref=Genbank:WP_240365611.1;Name=WP_240365611.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16170;product=hypothetical protein;protein_id=WP_240365611.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3032453	3035291	.	-	.	ID=gene-PKHYL_RS16175;Name=PKHYL_RS16175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16175;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3032453	3035291	.	-	0	ID=cds-PKHYL_RS16175;Parent=gene-PKHYL_RS16175;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672049.1;locus_tag=PKHYL_RS16175;product=aconitate hydratase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3035644	3035793	.	-	.	ID=gene-PKHYL_RS16180;Name=PKHYL_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16180;old_locus_tag=PKHYL_39400
NZ_AP019516.1	Protein Homology	CDS	3035644	3035793	.	-	0	ID=cds-WP_240365612.1;Parent=gene-PKHYL_RS16180;Dbxref=Genbank:WP_240365612.1;Name=WP_240365612.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022673.2;locus_tag=PKHYL_RS16180;product=DUF3025 domain-containing protein;protein_id=WP_240365612.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3035790	3036695	.	-	.	ID=gene-PKHYL_RS16185;Name=PKHYL_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16185;old_locus_tag=PKHYL_39410
NZ_AP019516.1	Protein Homology	CDS	3035790	3036695	.	-	0	ID=cds-WP_240365613.1;Parent=gene-PKHYL_RS16185;Dbxref=Genbank:WP_240365613.1;Name=WP_240365613.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022673.2;locus_tag=PKHYL_RS16185;product=DUF3025 domain-containing protein;protein_id=WP_240365613.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3036824	3037540	.	+	.	ID=gene-PKHYL_RS16190;Name=PKHYL_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16190;old_locus_tag=PKHYL_39420
NZ_AP019516.1	Protein Homology	CDS	3036824	3037540	.	+	0	ID=cds-WP_071002748.1;Parent=gene-PKHYL_RS16190;Dbxref=Genbank:WP_071002748.1;Name=WP_071002748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444473.1;locus_tag=PKHYL_RS16190;product=metal-dependent hydrolase;protein_id=WP_071002748.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3037585	3038163	.	+	.	ID=gene-PKHYL_RS16195;Name=PKHYL_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16195;old_locus_tag=PKHYL_39430
NZ_AP019516.1	Protein Homology	CDS	3037585	3038163	.	+	0	ID=cds-WP_071002747.1;Parent=gene-PKHYL_RS16195;Dbxref=Genbank:WP_071002747.1;Name=WP_071002747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016540782.1;locus_tag=PKHYL_RS16195;product=YchJ family protein;protein_id=WP_071002747.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3038188	3039108	.	-	.	ID=gene-PKHYL_RS16200;Name=PKHYL_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16200;old_locus_tag=PKHYL_39440
NZ_AP019516.1	Protein Homology	CDS	3038188	3039108	.	-	0	ID=cds-WP_071002746.1;Parent=gene-PKHYL_RS16200;Dbxref=Genbank:WP_071002746.1;Name=WP_071002746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003660453.1;locus_tag=PKHYL_RS16200;product=class II glutamine amidotransferase;protein_id=WP_071002746.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3039109	3039498	.	-	.	ID=gene-PKHYL_RS16205;Name=PKHYL_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16205;old_locus_tag=PKHYL_39450
NZ_AP019516.1	GeneMarkS-2+	CDS	3039109	3039498	.	-	0	ID=cds-WP_240365614.1;Parent=gene-PKHYL_RS16205;Dbxref=Genbank:WP_240365614.1;Name=WP_240365614.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16205;product=hypothetical protein;protein_id=WP_240365614.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3039547	3039990	.	-	.	ID=gene-PKHYL_RS16210;Name=PKHYL_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16210;old_locus_tag=PKHYL_39460
NZ_AP019516.1	GeneMarkS-2+	CDS	3039547	3039990	.	-	0	ID=cds-WP_240365615.1;Parent=gene-PKHYL_RS16210;Dbxref=Genbank:WP_240365615.1;Name=WP_240365615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16210;product=hypothetical protein;protein_id=WP_240365615.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3040057	3040713	.	-	.	ID=gene-PKHYL_RS16215;Name=PKHYL_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16215;old_locus_tag=PKHYL_39470
NZ_AP019516.1	Protein Homology	CDS	3040057	3040713	.	-	0	ID=cds-WP_240365616.1;Parent=gene-PKHYL_RS16215;Dbxref=Genbank:WP_240365616.1;Name=WP_240365616.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013775.2;locus_tag=PKHYL_RS16215;product=phosphotransferase;protein_id=WP_240365616.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3040900	3041681	.	+	.	ID=gene-PKHYL_RS16220;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=pseudogene;locus_tag=PKHYL_RS16220;old_locus_tag=PKHYL_39480;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3040900	3041681	.	+	0	ID=cds-PKHYL_RS16220;Parent=gene-PKHYL_RS16220;Note=frameshifted;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017395071.1;locus_tag=PKHYL_RS16220;product=imidazole glycerol phosphate synthase subunit HisF;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3041868	3042386	.	+	.	ID=gene-PKHYL_RS16225;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=PKHYL_RS16225;old_locus_tag=PKHYL_39500
NZ_AP019516.1	Protein Homology	CDS	3041868	3042386	.	+	0	ID=cds-WP_057762077.1;Parent=gene-PKHYL_RS16225;Dbxref=Genbank:WP_057762077.1;Name=WP_057762077.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281323.1;locus_tag=PKHYL_RS16225;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_057762077.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3042603	3043454	.	+	.	ID=gene-PKHYL_RS16230;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=PKHYL_RS16230;old_locus_tag=PKHYL_39510
NZ_AP019516.1	Protein Homology	CDS	3042603	3043454	.	+	0	ID=cds-WP_240365617.1;Parent=gene-PKHYL_RS16230;Dbxref=Genbank:WP_240365617.1;Name=WP_240365617.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672037.1;locus_tag=PKHYL_RS16230;product=transcription antitermination factor NusB;protein_id=WP_240365617.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3043463	3044464	.	+	.	ID=gene-PKHYL_RS16235;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=PKHYL_RS16235;old_locus_tag=PKHYL_39520
NZ_AP019516.1	Protein Homology	CDS	3043463	3044464	.	+	0	ID=cds-WP_240365618.1;Parent=gene-PKHYL_RS16235;Dbxref=Genbank:WP_240365618.1;Name=WP_240365618.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004923184.1;locus_tag=PKHYL_RS16235;product=thiamine-phosphate kinase;protein_id=WP_240365618.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3044499	3045168	.	+	.	ID=gene-PKHYL_RS16240;Name=PKHYL_RS16240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16240;old_locus_tag=PKHYL_39530;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3044499	3045168	.	+	0	ID=cds-PKHYL_RS16240;Parent=gene-PKHYL_RS16240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019672035.1;locus_tag=PKHYL_RS16240;product=phosphatidylglycerophosphatase A;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3045272	3046648	.	+	.	ID=gene-PKHYL_RS16245;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=PKHYL_RS16245;old_locus_tag=PKHYL_39540
NZ_AP019516.1	Protein Homology	CDS	3045272	3046648	.	+	0	ID=cds-WP_093070089.1;Parent=gene-PKHYL_RS16245;Dbxref=Genbank:WP_093070089.1;Name=WP_093070089.1;Ontology_term=GO:0009103,GO:0009252,GO:0003977,GO:0019134,GO:0005737;gbkey=CDS;gene=glmU;go_component=cytoplasm|0005737||IEA;go_function=UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281327.1;locus_tag=PKHYL_RS16245;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_093070089.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3046832	3048674	.	+	.	ID=gene-PKHYL_RS17865;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=pseudogene;locus_tag=PKHYL_RS17865;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3046832	3048674	.	+	0	ID=cds-PKHYL_RS17865;Parent=gene-PKHYL_RS17865;Note=frameshifted;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000334171.1;locus_tag=PKHYL_RS17865;product=glutamine--fructose-6-phosphate transaminase (isomerizing);pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3048785	3049096	.	+	.	ID=gene-PKHYL_RS16265;Name=PKHYL_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16265;old_locus_tag=PKHYL_39580
NZ_AP019516.1	GeneMarkS-2+	CDS	3048785	3049096	.	+	0	ID=cds-WP_240365620.1;Parent=gene-PKHYL_RS16265;Dbxref=Genbank:WP_240365620.1;Name=WP_240365620.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16265;product=hypothetical protein;protein_id=WP_240365620.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3049175	3049462	.	-	.	ID=gene-PKHYL_RS16270;Name=PKHYL_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16270;old_locus_tag=PKHYL_39590
NZ_AP019516.1	Protein Homology	CDS	3049175	3049462	.	-	0	ID=cds-WP_240365621.1;Parent=gene-PKHYL_RS16270;Dbxref=Genbank:WP_240365621.1;Name=WP_240365621.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024803.2;locus_tag=PKHYL_RS16270;product=MerR family transcriptional regulator;protein_id=WP_240365621.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3049549	3050262	.	+	.	ID=gene-PKHYL_RS16275;Name=PKHYL_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16275;old_locus_tag=PKHYL_39600
NZ_AP019516.1	Protein Homology	CDS	3049549	3050262	.	+	0	ID=cds-WP_240365622.1;Parent=gene-PKHYL_RS16275;Dbxref=Genbank:WP_240365622.1;Name=WP_240365622.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023568.2;locus_tag=PKHYL_RS16275;product=alpha/beta fold hydrolase;protein_id=WP_240365622.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3050488	3050778	.	+	.	ID=gene-PKHYL_RS16280;Name=PKHYL_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16280;old_locus_tag=PKHYL_39610
NZ_AP019516.1	GeneMarkS-2+	CDS	3050488	3050778	.	+	0	ID=cds-WP_240365623.1;Parent=gene-PKHYL_RS16280;Dbxref=Genbank:WP_240365623.1;Name=WP_240365623.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16280;product=hypothetical protein;protein_id=WP_240365623.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3050872	3051222	.	+	.	ID=gene-PKHYL_RS16285;Name=PKHYL_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16285;old_locus_tag=PKHYL_39620
NZ_AP019516.1	GeneMarkS-2+	CDS	3050872	3051222	.	+	0	ID=cds-WP_240365624.1;Parent=gene-PKHYL_RS16285;Dbxref=Genbank:WP_240365624.1;Name=WP_240365624.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16285;product=PaaI family thioesterase;protein_id=WP_240365624.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3051237	3051395	.	+	.	ID=gene-PKHYL_RS16290;Name=PKHYL_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16290
NZ_AP019516.1	Protein Homology	CDS	3051237	3051395	.	+	0	ID=cds-WP_240365625.1;Parent=gene-PKHYL_RS16290;Dbxref=Genbank:WP_240365625.1;Name=WP_240365625.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00369.1;locus_tag=PKHYL_RS16290;product=hypothetical protein;protein_id=WP_240365625.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3051813	3052629	.	-	.	ID=gene-PKHYL_RS16295;Name=PKHYL_RS16295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16295;old_locus_tag=PKHYL_39640;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3051813	3052629	.	-	0	ID=cds-PKHYL_RS16295;Parent=gene-PKHYL_RS16295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004881221.1;locus_tag=PKHYL_RS16295;product=sulfite exporter TauE/SafE family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3052696	3053199	.	-	.	ID=gene-PKHYL_RS16300;Name=PKHYL_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16300;old_locus_tag=PKHYL_39650
NZ_AP019516.1	Protein Homology	CDS	3052696	3053199	.	-	0	ID=cds-WP_025646795.1;Parent=gene-PKHYL_RS16300;Dbxref=Genbank:WP_025646795.1;Name=WP_025646795.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005239705.1;locus_tag=PKHYL_RS16300;product=flavin reductase;protein_id=WP_025646795.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3053303	3054329	.	-	.	ID=gene-PKHYL_RS16305;Name=PKHYL_RS16305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16305;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3053303	3054329	.	-	0	ID=cds-PKHYL_RS16305;Parent=gene-PKHYL_RS16305;Note=frameshifted;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009509868.1;locus_tag=PKHYL_RS16305;product=methionine synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3054387	3055379	.	-	.	ID=gene-PKHYL_RS16310;Name=PKHYL_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16310;old_locus_tag=PKHYL_39690
NZ_AP019516.1	Protein Homology	CDS	3054387	3055379	.	-	0	ID=cds-WP_071002731.1;Parent=gene-PKHYL_RS16310;Dbxref=Genbank:WP_071002731.1;Name=WP_071002731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004691637.1;locus_tag=PKHYL_RS16310;product=DUF1852 domain-containing protein;protein_id=WP_071002731.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3055651	3056187	.	-	.	ID=gene-PKHYL_RS16315;Name=PKHYL_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16315;old_locus_tag=PKHYL_39700
NZ_AP019516.1	GeneMarkS-2+	CDS	3055651	3056187	.	-	0	ID=cds-WP_240365626.1;Parent=gene-PKHYL_RS16315;Dbxref=Genbank:WP_240365626.1;Name=WP_240365626.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16315;product=hypothetical protein;protein_id=WP_240365626.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3056371	3059463	.	-	.	ID=gene-PKHYL_RS16320;Name=PKHYL_RS16320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16320;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3056371	3059463	.	-	0	ID=cds-PKHYL_RS16320;Parent=gene-PKHYL_RS16320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200484.1;locus_tag=PKHYL_RS16320;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3059460	3060815	.	-	.	ID=gene-PKHYL_RS16325;Name=PKHYL_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16325;old_locus_tag=PKHYL_39730
NZ_AP019516.1	Protein Homology	CDS	3059460	3060815	.	-	0	ID=cds-WP_240365627.1;Parent=gene-PKHYL_RS16325;Dbxref=Genbank:WP_240365627.1;Name=WP_240365627.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010200482.1;locus_tag=PKHYL_RS16325;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_240365627.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3060918	3061601	.	-	.	ID=gene-PKHYL_RS16330;Name=PKHYL_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16330;old_locus_tag=PKHYL_39740
NZ_AP019516.1	Protein Homology	CDS	3060918	3061601	.	-	0	ID=cds-WP_240365628.1;Parent=gene-PKHYL_RS16330;Dbxref=Genbank:WP_240365628.1;Name=WP_240365628.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=PKHYL_RS16330;product=TetR/AcrR family transcriptional regulator;protein_id=WP_240365628.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3061675	3064026	.	-	.	ID=gene-PKHYL_RS16335;Name=recG;gbkey=Gene;gene=recG;gene_biotype=pseudogene;locus_tag=PKHYL_RS16335;old_locus_tag=PKHYL_39770;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3061675	3064026	.	-	0	ID=cds-PKHYL_RS16335;Parent=gene-PKHYL_RS16335;Note=frameshifted;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514707.1;locus_tag=PKHYL_RS16335;product=ATP-dependent DNA helicase RecG;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3064328	3064822	.	+	.	ID=gene-PKHYL_RS16340;Name=PKHYL_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16340;old_locus_tag=PKHYL_39780
NZ_AP019516.1	Protein Homology	CDS	3064328	3064822	.	+	0	ID=cds-WP_240365629.1;Parent=gene-PKHYL_RS16340;Dbxref=Genbank:WP_240365629.1;Name=WP_240365629.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: protein motif:HMM:NF013862.2;locus_tag=PKHYL_RS16340;product=patatin-like phospholipase family protein;protein_id=WP_240365629.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3064879	3065313	.	+	.	ID=gene-PKHYL_RS16345;Name=PKHYL_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16345;old_locus_tag=PKHYL_39790
NZ_AP019516.1	GeneMarkS-2+	CDS	3064879	3065313	.	+	0	ID=cds-WP_240365630.1;Parent=gene-PKHYL_RS16345;Dbxref=Genbank:WP_240365630.1;Name=WP_240365630.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16345;product=hypothetical protein;protein_id=WP_240365630.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3065455	3065928	.	-	.	ID=gene-PKHYL_RS16350;Name=PKHYL_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16350;old_locus_tag=PKHYL_39800
NZ_AP019516.1	Protein Homology	CDS	3065455	3065928	.	-	0	ID=cds-WP_240365631.1;Parent=gene-PKHYL_RS16350;Dbxref=Genbank:WP_240365631.1;Name=WP_240365631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011961461.1;locus_tag=PKHYL_RS16350;product=hypothetical protein;protein_id=WP_240365631.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3066384	3067706	.	+	.	ID=gene-PKHYL_RS16355;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=PKHYL_RS16355;old_locus_tag=PKHYL_39810
NZ_AP019516.1	Protein Homology	CDS	3066384	3067706	.	+	0	ID=cds-WP_071002725.1;Parent=gene-PKHYL_RS16355;Dbxref=Genbank:WP_071002725.1;Name=WP_071002725.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=acetyl-CoA:L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514710.1;locus_tag=PKHYL_RS16355;product=amino-acid N-acetyltransferase;protein_id=WP_071002725.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3067802	3068532	.	-	.	ID=gene-PKHYL_RS16360;Name=PKHYL_RS16360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16360;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3067802	3068532	.	-	0	ID=cds-PKHYL_RS16360;Parent=gene-PKHYL_RS16360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444500.1;locus_tag=PKHYL_RS16360;product=FKBP-type peptidyl-prolyl cis-trans isomerase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3068995	3070596	.	+	.	ID=gene-PKHYL_RS16365;Name=PKHYL_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16365;old_locus_tag=PKHYL_39840
NZ_AP019516.1	Protein Homology	CDS	3068995	3070596	.	+	0	ID=cds-WP_240365632.1;Parent=gene-PKHYL_RS16365;Dbxref=Genbank:WP_240365632.1;Name=WP_240365632.1;Ontology_term=GO:0055085,GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444501.1;locus_tag=PKHYL_RS16365;product=mechanosensitive ion channel;protein_id=WP_240365632.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3070804	3071088	.	-	.	ID=gene-PKHYL_RS16370;Name=PKHYL_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16370;old_locus_tag=PKHYL_39850
NZ_AP019516.1	GeneMarkS-2+	CDS	3070804	3071088	.	-	0	ID=cds-WP_240365633.1;Parent=gene-PKHYL_RS16370;Dbxref=Genbank:WP_240365633.1;Name=WP_240365633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16370;product=hypothetical protein;protein_id=WP_240365633.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3071117	3072247	.	-	.	ID=gene-PKHYL_RS16375;Name=PKHYL_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16375;old_locus_tag=PKHYL_39860
NZ_AP019516.1	GeneMarkS-2+	CDS	3071117	3072247	.	-	0	ID=cds-WP_240365634.1;Parent=gene-PKHYL_RS16375;Dbxref=Genbank:WP_240365634.1;Name=WP_240365634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16375;product=hypothetical protein;protein_id=WP_240365634.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3072556	3072807	.	+	.	ID=gene-PKHYL_RS17870;Name=PKHYL_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17870;old_locus_tag=PKHYL_39870
NZ_AP019516.1	Protein Homology	CDS	3072556	3072807	.	+	0	ID=cds-WP_269778197.1;Parent=gene-PKHYL_RS17870;Dbxref=Genbank:WP_269778197.1;Name=WP_269778197.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012334.2;locus_tag=PKHYL_RS17870;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_269778197.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3072800	3072907	.	+	.	ID=gene-PKHYL_RS17875;Name=PKHYL_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17875
NZ_AP019516.1	Protein Homology	CDS	3072800	3072907	.	+	0	ID=cds-WP_269778198.1;Parent=gene-PKHYL_RS17875;Dbxref=Genbank:WP_269778198.1;Name=WP_269778198.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012334.2;locus_tag=PKHYL_RS17875;product=hypothetical protein;protein_id=WP_269778198.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3072882	3073340	.	+	.	ID=gene-PKHYL_RS17880;Name=PKHYL_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17880;old_locus_tag=PKHYL_39880
NZ_AP019516.1	Protein Homology	CDS	3072882	3073340	.	+	0	ID=cds-WP_269778199.1;Parent=gene-PKHYL_RS17880;Dbxref=Genbank:WP_269778199.1;Name=WP_269778199.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=PKHYL_RS17880;product=SDR family oxidoreductase;protein_id=WP_269778199.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3073443	3073832	.	+	.	ID=gene-PKHYL_RS16385;Name=PKHYL_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16385;old_locus_tag=PKHYL_39890
NZ_AP019516.1	Protein Homology	CDS	3073443	3073832	.	+	0	ID=cds-WP_240365635.1-4;Parent=gene-PKHYL_RS16385;Dbxref=Genbank:WP_240365635.1;Name=WP_240365635.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024908.2;locus_tag=PKHYL_RS16385;product=transposase;protein_id=WP_240365635.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3073904	3074791	.	+	.	ID=gene-PKHYL_RS16390;Name=PKHYL_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16390;old_locus_tag=PKHYL_39900
NZ_AP019516.1	Protein Homology	CDS	3073904	3074791	.	+	0	ID=cds-WP_240365636.1-3;Parent=gene-PKHYL_RS16390;Dbxref=Genbank:WP_240365636.1;Name=WP_240365636.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033516.0;locus_tag=PKHYL_RS16390;product=IS3 family transposase;protein_id=WP_240365636.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3074914	3075609	.	-	.	ID=gene-PKHYL_RS16395;Name=PKHYL_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16395;old_locus_tag=PKHYL_39910
NZ_AP019516.1	Protein Homology	CDS	3074914	3075609	.	-	0	ID=cds-WP_071002721.1;Parent=gene-PKHYL_RS16395;Dbxref=Genbank:WP_071002721.1;Name=WP_071002721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514715.1;locus_tag=PKHYL_RS16395;product=lysophospholipid acyltransferase family protein;protein_id=WP_071002721.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3075776	3077665	.	-	.	ID=gene-PKHYL_RS16400;Name=parE;gbkey=Gene;gene=parE;gene_biotype=pseudogene;locus_tag=PKHYL_RS16400;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3075776	3077665	.	-	0	ID=cds-PKHYL_RS16400;Parent=gene-PKHYL_RS16400;Note=frameshifted;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004657097.1;locus_tag=PKHYL_RS16400;product=DNA topoisomerase IV subunit B;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3077776	3078429	.	-	.	ID=gene-PKHYL_RS16405;Name=PKHYL_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16405;old_locus_tag=PKHYL_39950
NZ_AP019516.1	Protein Homology	CDS	3077776	3078429	.	-	0	ID=cds-WP_071002719.1;Parent=gene-PKHYL_RS16405;Dbxref=Genbank:WP_071002719.1;Name=WP_071002719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010201288.1;locus_tag=PKHYL_RS16405;product=hypothetical protein;protein_id=WP_071002719.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3078618	3078743	.	+	.	ID=gene-PKHYL_RS17885;Name=PKHYL_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17885
NZ_AP019516.1	GeneMarkS-2+	CDS	3078618	3078743	.	+	0	ID=cds-WP_269778200.1;Parent=gene-PKHYL_RS17885;Dbxref=Genbank:WP_269778200.1;Name=WP_269778200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS17885;product=hypothetical protein;protein_id=WP_269778200.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3078704	3078877	.	+	.	ID=gene-PKHYL_RS16410;Name=PKHYL_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16410;old_locus_tag=PKHYL_39960
NZ_AP019516.1	Protein Homology	CDS	3078704	3078877	.	+	0	ID=cds-WP_240366558.1;Parent=gene-PKHYL_RS16410;Dbxref=Genbank:WP_240366558.1;Name=WP_240366558.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018630.2;locus_tag=PKHYL_RS16410;product=DUF1289 domain-containing protein;protein_id=WP_240366558.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3078900	3080222	.	-	.	ID=gene-PKHYL_RS16415;Name=PKHYL_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16415;old_locus_tag=PKHYL_39970
NZ_AP019516.1	GeneMarkS-2+	CDS	3078900	3080222	.	-	0	ID=cds-WP_240365637.1;Parent=gene-PKHYL_RS16415;Dbxref=Genbank:WP_240365637.1;Name=WP_240365637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16415;product=hypothetical protein;protein_id=WP_240365637.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3080449	3080562	.	-	.	ID=gene-PKHYL_RS16420;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PKHYL_RS16420;old_locus_tag=PKHYL_r00070
NZ_AP019516.1	cmsearch	rRNA	3080449	3080562	.	-	.	ID=rna-PKHYL_RS16420;Parent=gene-PKHYL_RS16420;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS16420;product=5S ribosomal RNA
NZ_AP019516.1	cmsearch	exon	3080449	3080562	.	-	.	ID=exon-PKHYL_RS16420-1;Parent=rna-PKHYL_RS16420;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS16420;product=5S ribosomal RNA
NZ_AP019516.1	RefSeq	gene	3080724	3083582	.	-	.	ID=gene-PKHYL_RS16425;Name=PKHYL_RS16425;gbkey=Gene;gene_biotype=rRNA;locus_tag=PKHYL_RS16425;old_locus_tag=PKHYL_r00080
NZ_AP019516.1	cmsearch	rRNA	3080724	3083582	.	-	.	ID=rna-PKHYL_RS16425;Parent=gene-PKHYL_RS16425;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS16425;product=23S ribosomal RNA
NZ_AP019516.1	cmsearch	exon	3080724	3083582	.	-	.	ID=exon-PKHYL_RS16425-1;Parent=rna-PKHYL_RS16425;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS16425;product=23S ribosomal RNA
NZ_AP019516.1	RefSeq	gene	3083935	3084010	.	-	.	ID=gene-PKHYL_RS16430;Name=PKHYL_RS16430;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS16430;old_locus_tag=PKHYL_t00440
NZ_AP019516.1	tRNAscan-SE	tRNA	3083935	3084010	.	-	.	ID=rna-PKHYL_RS16430;Parent=gene-PKHYL_RS16430;anticodon=(pos:complement(3083975..3083977));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16430;product=tRNA-Ala
NZ_AP019516.1	tRNAscan-SE	exon	3083935	3084010	.	-	.	ID=exon-PKHYL_RS16430-1;Parent=rna-PKHYL_RS16430;anticodon=(pos:complement(3083975..3083977));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16430;product=tRNA-Ala
NZ_AP019516.1	RefSeq	gene	3084108	3084184	.	-	.	ID=gene-PKHYL_RS16435;Name=PKHYL_RS16435;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS16435;old_locus_tag=PKHYL_t00450
NZ_AP019516.1	tRNAscan-SE	tRNA	3084108	3084184	.	-	.	ID=rna-PKHYL_RS16435;Parent=gene-PKHYL_RS16435;anticodon=(pos:complement(3084148..3084150));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16435;product=tRNA-Ile
NZ_AP019516.1	tRNAscan-SE	exon	3084108	3084184	.	-	.	ID=exon-PKHYL_RS16435-1;Parent=rna-PKHYL_RS16435;anticodon=(pos:complement(3084148..3084150));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16435;product=tRNA-Ile
NZ_AP019516.1	RefSeq	gene	3084258	3085793	.	-	.	ID=gene-PKHYL_RS16440;Name=PKHYL_RS16440;gbkey=Gene;gene_biotype=rRNA;locus_tag=PKHYL_RS16440;old_locus_tag=PKHYL_r00090
NZ_AP019516.1	cmsearch	rRNA	3084258	3085793	.	-	.	ID=rna-PKHYL_RS16440;Parent=gene-PKHYL_RS16440;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS16440;product=16S ribosomal RNA
NZ_AP019516.1	cmsearch	exon	3084258	3085793	.	-	.	ID=exon-PKHYL_RS16440-1;Parent=rna-PKHYL_RS16440;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS16440;product=16S ribosomal RNA
NZ_AP019516.1	RefSeq	gene	3086502	3086615	.	-	.	ID=gene-PKHYL_RS16445;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PKHYL_RS16445;old_locus_tag=PKHYL_r00100
NZ_AP019516.1	cmsearch	rRNA	3086502	3086615	.	-	.	ID=rna-PKHYL_RS16445;Parent=gene-PKHYL_RS16445;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS16445;product=5S ribosomal RNA
NZ_AP019516.1	cmsearch	exon	3086502	3086615	.	-	.	ID=exon-PKHYL_RS16445-1;Parent=rna-PKHYL_RS16445;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS16445;product=5S ribosomal RNA
NZ_AP019516.1	RefSeq	gene	3086777	3089635	.	-	.	ID=gene-PKHYL_RS16450;Name=PKHYL_RS16450;gbkey=Gene;gene_biotype=rRNA;locus_tag=PKHYL_RS16450;old_locus_tag=PKHYL_r00110
NZ_AP019516.1	cmsearch	rRNA	3086777	3089635	.	-	.	ID=rna-PKHYL_RS16450;Parent=gene-PKHYL_RS16450;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS16450;product=23S ribosomal RNA
NZ_AP019516.1	cmsearch	exon	3086777	3089635	.	-	.	ID=exon-PKHYL_RS16450-1;Parent=rna-PKHYL_RS16450;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS16450;product=23S ribosomal RNA
NZ_AP019516.1	RefSeq	gene	3089988	3090063	.	-	.	ID=gene-PKHYL_RS16455;Name=PKHYL_RS16455;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS16455;old_locus_tag=PKHYL_t00460
NZ_AP019516.1	tRNAscan-SE	tRNA	3089988	3090063	.	-	.	ID=rna-PKHYL_RS16455;Parent=gene-PKHYL_RS16455;anticodon=(pos:complement(3090028..3090030));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16455;product=tRNA-Ala
NZ_AP019516.1	tRNAscan-SE	exon	3089988	3090063	.	-	.	ID=exon-PKHYL_RS16455-1;Parent=rna-PKHYL_RS16455;anticodon=(pos:complement(3090028..3090030));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16455;product=tRNA-Ala
NZ_AP019516.1	RefSeq	gene	3090161	3090237	.	-	.	ID=gene-PKHYL_RS16460;Name=PKHYL_RS16460;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS16460;old_locus_tag=PKHYL_t00470
NZ_AP019516.1	tRNAscan-SE	tRNA	3090161	3090237	.	-	.	ID=rna-PKHYL_RS16460;Parent=gene-PKHYL_RS16460;anticodon=(pos:complement(3090201..3090203));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16460;product=tRNA-Ile
NZ_AP019516.1	tRNAscan-SE	exon	3090161	3090237	.	-	.	ID=exon-PKHYL_RS16460-1;Parent=rna-PKHYL_RS16460;anticodon=(pos:complement(3090201..3090203));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16460;product=tRNA-Ile
NZ_AP019516.1	RefSeq	gene	3090311	3091846	.	-	.	ID=gene-PKHYL_RS16465;Name=PKHYL_RS16465;gbkey=Gene;gene_biotype=rRNA;locus_tag=PKHYL_RS16465;old_locus_tag=PKHYL_r00120
NZ_AP019516.1	cmsearch	rRNA	3090311	3091846	.	-	.	ID=rna-PKHYL_RS16465;Parent=gene-PKHYL_RS16465;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS16465;product=16S ribosomal RNA
NZ_AP019516.1	cmsearch	exon	3090311	3091846	.	-	.	ID=exon-PKHYL_RS16465-1;Parent=rna-PKHYL_RS16465;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS16465;product=16S ribosomal RNA
NZ_AP019516.1	RefSeq	gene	3092558	3092671	.	-	.	ID=gene-PKHYL_RS16470;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PKHYL_RS16470;old_locus_tag=PKHYL_r00130
NZ_AP019516.1	cmsearch	rRNA	3092558	3092671	.	-	.	ID=rna-PKHYL_RS16470;Parent=gene-PKHYL_RS16470;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS16470;product=5S ribosomal RNA
NZ_AP019516.1	cmsearch	exon	3092558	3092671	.	-	.	ID=exon-PKHYL_RS16470-1;Parent=rna-PKHYL_RS16470;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS16470;product=5S ribosomal RNA
NZ_AP019516.1	RefSeq	gene	3092832	3095691	.	-	.	ID=gene-PKHYL_RS16475;Name=PKHYL_RS16475;gbkey=Gene;gene_biotype=rRNA;locus_tag=PKHYL_RS16475;old_locus_tag=PKHYL_r00140
NZ_AP019516.1	cmsearch	rRNA	3092832	3095691	.	-	.	ID=rna-PKHYL_RS16475;Parent=gene-PKHYL_RS16475;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS16475;product=23S ribosomal RNA
NZ_AP019516.1	cmsearch	exon	3092832	3095691	.	-	.	ID=exon-PKHYL_RS16475-1;Parent=rna-PKHYL_RS16475;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS16475;product=23S ribosomal RNA
NZ_AP019516.1	RefSeq	gene	3096043	3096118	.	-	.	ID=gene-PKHYL_RS16480;Name=PKHYL_RS16480;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS16480;old_locus_tag=PKHYL_t00480
NZ_AP019516.1	tRNAscan-SE	tRNA	3096043	3096118	.	-	.	ID=rna-PKHYL_RS16480;Parent=gene-PKHYL_RS16480;anticodon=(pos:complement(3096083..3096085));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16480;product=tRNA-Ala
NZ_AP019516.1	tRNAscan-SE	exon	3096043	3096118	.	-	.	ID=exon-PKHYL_RS16480-1;Parent=rna-PKHYL_RS16480;anticodon=(pos:complement(3096083..3096085));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16480;product=tRNA-Ala
NZ_AP019516.1	RefSeq	gene	3096215	3096291	.	-	.	ID=gene-PKHYL_RS16485;Name=PKHYL_RS16485;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS16485;old_locus_tag=PKHYL_t00490
NZ_AP019516.1	tRNAscan-SE	tRNA	3096215	3096291	.	-	.	ID=rna-PKHYL_RS16485;Parent=gene-PKHYL_RS16485;anticodon=(pos:complement(3096255..3096257));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16485;product=tRNA-Ile
NZ_AP019516.1	tRNAscan-SE	exon	3096215	3096291	.	-	.	ID=exon-PKHYL_RS16485-1;Parent=rna-PKHYL_RS16485;anticodon=(pos:complement(3096255..3096257));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16485;product=tRNA-Ile
NZ_AP019516.1	RefSeq	gene	3096365	3097900	.	-	.	ID=gene-PKHYL_RS16490;Name=PKHYL_RS16490;gbkey=Gene;gene_biotype=rRNA;locus_tag=PKHYL_RS16490;old_locus_tag=PKHYL_r00150
NZ_AP019516.1	cmsearch	rRNA	3096365	3097900	.	-	.	ID=rna-PKHYL_RS16490;Parent=gene-PKHYL_RS16490;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS16490;product=16S ribosomal RNA
NZ_AP019516.1	cmsearch	exon	3096365	3097900	.	-	.	ID=exon-PKHYL_RS16490-1;Parent=rna-PKHYL_RS16490;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=PKHYL_RS16490;product=16S ribosomal RNA
NZ_AP019516.1	RefSeq	gene	3099014	3100948	.	+	.	ID=gene-PKHYL_RS16495;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=PKHYL_RS16495;old_locus_tag=PKHYL_39980
NZ_AP019516.1	Protein Homology	CDS	3099014	3100948	.	+	0	ID=cds-WP_240365638.1;Parent=gene-PKHYL_RS16495;Dbxref=Genbank:WP_240365638.1;Name=WP_240365638.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197328.1;locus_tag=PKHYL_RS16495;product=threonine--tRNA ligase;protein_id=WP_240365638.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3100972	3101475	.	+	.	ID=gene-PKHYL_RS16500;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=PKHYL_RS16500;old_locus_tag=PKHYL_39990
NZ_AP019516.1	Protein Homology	CDS	3100972	3101475	.	+	0	ID=cds-WP_240365639.1;Parent=gene-PKHYL_RS16500;Dbxref=Genbank:WP_240365639.1;Name=WP_240365639.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281352.1;locus_tag=PKHYL_RS16500;product=translation initiation factor IF-3;protein_id=WP_240365639.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3101808	3102590	.	+	.	ID=gene-PKHYL_RS17890;Name=PKHYL_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17890;old_locus_tag=PKHYL_40000
NZ_AP019516.1	Protein Homology	CDS	3101808	3102590	.	+	0	ID=cds-WP_269778201.1;Parent=gene-PKHYL_RS17890;Dbxref=Genbank:WP_269778201.1;Name=WP_269778201.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017617.2;locus_tag=PKHYL_RS17890;product=toxic anion resistance protein;protein_id=WP_269778201.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3102508	3103053	.	+	.	ID=gene-PKHYL_RS17895;Name=PKHYL_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17895;old_locus_tag=PKHYL_40010
NZ_AP019516.1	Protein Homology	CDS	3102508	3103053	.	+	0	ID=cds-WP_269778202.1;Parent=gene-PKHYL_RS17895;Dbxref=Genbank:WP_269778202.1;Name=WP_269778202.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017617.2;locus_tag=PKHYL_RS17895;product=toxic anion resistance protein;protein_id=WP_269778202.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3103193	3104836	.	+	.	ID=gene-PKHYL_RS16510;Name=PKHYL_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16510;old_locus_tag=PKHYL_40020
NZ_AP019516.1	Protein Homology	CDS	3103193	3104836	.	+	0	ID=cds-WP_269778203.1;Parent=gene-PKHYL_RS16510;Dbxref=Genbank:WP_269778203.1;Name=WP_269778203.1;Ontology_term=GO:0006401,GO:0016896;gbkey=CDS;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: protein motif:HMM:TIGR00358.1;locus_tag=PKHYL_RS16510;product=VacB/RNase II family 3'-5' exoribonuclease;protein_id=WP_269778203.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3104877	3105455	.	+	.	ID=gene-PKHYL_RS17900;Name=PKHYL_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS17900;old_locus_tag=PKHYL_40030
NZ_AP019516.1	Protein Homology	CDS	3104877	3105455	.	+	0	ID=cds-WP_269778204.1;Parent=gene-PKHYL_RS17900;Dbxref=Genbank:WP_269778204.1;Name=WP_269778204.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: protein motif:HMM:NF012784.2;locus_tag=PKHYL_RS17900;product=S1 RNA-binding domain-containing protein;protein_id=WP_269778204.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3105545	3105844	.	-	.	ID=gene-PKHYL_RS16520;Name=PKHYL_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16520;old_locus_tag=PKHYL_40040
NZ_AP019516.1	Protein Homology	CDS	3105545	3105844	.	-	0	ID=cds-WP_240365640.1;Parent=gene-PKHYL_RS16520;Dbxref=Genbank:WP_240365640.1;Name=WP_240365640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444513.1;locus_tag=PKHYL_RS16520;product=hypothetical protein;protein_id=WP_240365640.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3105926	3107555	.	-	.	ID=gene-PKHYL_RS16525;Name=PKHYL_RS16525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16525;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3105926	3107555	.	-	0	ID=cds-PKHYL_RS16525;Parent=gene-PKHYL_RS16525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444514.1;locus_tag=PKHYL_RS16525;product=mechanosensitive ion channel family protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3107645	3108382	.	-	.	ID=gene-PKHYL_RS16530;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=PKHYL_RS16530;old_locus_tag=PKHYL_40090
NZ_AP019516.1	Protein Homology	CDS	3107645	3108382	.	-	0	ID=cds-WP_071002707.1;Parent=gene-PKHYL_RS16530;Dbxref=Genbank:WP_071002707.1;Name=WP_071002707.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197307.1;locus_tag=PKHYL_RS16530;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_071002707.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3109490	3110665	.	+	.	ID=gene-PKHYL_RS16535;Name=nqrA;gbkey=Gene;gene=nqrA;gene_biotype=protein_coding;locus_tag=PKHYL_RS16535;old_locus_tag=PKHYL_40100
NZ_AP019516.1	Protein Homology	CDS	3109490	3110665	.	+	0	ID=cds-WP_240365641.1;Parent=gene-PKHYL_RS16535;Dbxref=Genbank:WP_240365641.1;Name=WP_240365641.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: protein motif:HMM:TIGR01936.1;locus_tag=PKHYL_RS16535;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit A;protein_id=WP_240365641.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3110623	3110763	.	+	.	ID=gene-PKHYL_RS16540;Name=PKHYL_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16540;old_locus_tag=PKHYL_40110
NZ_AP019516.1	GeneMarkS-2+	CDS	3110623	3110763	.	+	0	ID=cds-WP_240365642.1;Parent=gene-PKHYL_RS16540;Dbxref=Genbank:WP_240365642.1;Name=WP_240365642.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16540;product=hypothetical protein;protein_id=WP_240365642.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3110821	3112056	.	+	.	ID=gene-PKHYL_RS16545;Name=PKHYL_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16545;old_locus_tag=PKHYL_40120
NZ_AP019516.1	Protein Homology	CDS	3110821	3112056	.	+	0	ID=cds-WP_071002705.1;Parent=gene-PKHYL_RS16545;Dbxref=Genbank:WP_071002705.1;Name=WP_071002705.1;Ontology_term=GO:0022904,GO:0055085,GO:0010181,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=respiratory electron transport chain|0022904||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514726.1;locus_tag=PKHYL_RS16545;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=WP_071002705.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3112037	3112940	.	+	.	ID=gene-PKHYL_RS16550;Name=PKHYL_RS16550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16550;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3112037	3112940	.	+	0	ID=cds-PKHYL_RS16550;Parent=gene-PKHYL_RS16550;Note=frameshifted;Ontology_term=GO:0006814,GO:0010181,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281359.1;locus_tag=PKHYL_RS16550;product=Na(+)-translocating NADH-quinone reductase subunit C;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3112942	3113613	.	+	.	ID=gene-PKHYL_RS16555;Name=PKHYL_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16555;old_locus_tag=PKHYL_40150
NZ_AP019516.1	Protein Homology	CDS	3112942	3113613	.	+	0	ID=cds-WP_071002703.1;Parent=gene-PKHYL_RS16555;Dbxref=Genbank:WP_071002703.1;Name=WP_071002703.1;Ontology_term=GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657762.1;locus_tag=PKHYL_RS16555;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=WP_071002703.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3113613	3114221	.	+	.	ID=gene-PKHYL_RS16560;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=PKHYL_RS16560;old_locus_tag=PKHYL_40160
NZ_AP019516.1	Protein Homology	CDS	3113613	3114221	.	+	0	ID=cds-WP_058025262.1;Parent=gene-PKHYL_RS16560;Dbxref=Genbank:WP_058025262.1;Name=WP_058025262.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003657760.1;locus_tag=PKHYL_RS16560;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=WP_058025262.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3114344	3115580	.	+	.	ID=gene-PKHYL_RS16565;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=pseudogene;locus_tag=PKHYL_RS16565;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3114344	3115580	.	+	0	ID=cds-PKHYL_RS16565;Parent=gene-PKHYL_RS16565;Note=frameshifted;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrF;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013108126.1;locus_tag=PKHYL_RS16565;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3115757	3116557	.	+	.	ID=gene-PKHYL_RS16570;Name=PKHYL_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16570;old_locus_tag=PKHYL_40200
NZ_AP019516.1	Protein Homology	CDS	3115757	3116557	.	+	0	ID=cds-WP_240365643.1;Parent=gene-PKHYL_RS16570;Dbxref=Genbank:WP_240365643.1;Name=WP_240365643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197296.1;locus_tag=PKHYL_RS16570;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_240365643.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3116710	3117885	.	+	.	ID=gene-PKHYL_RS16575;Name=PKHYL_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16575;old_locus_tag=PKHYL_40210
NZ_AP019516.1	Protein Homology	CDS	3116710	3117885	.	+	0	ID=cds-WP_240365644.1;Parent=gene-PKHYL_RS16575;Dbxref=Genbank:WP_240365644.1;Name=WP_240365644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444516.1;locus_tag=PKHYL_RS16575;product=FAD:protein FMN transferase;protein_id=WP_240365644.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3117999	3118259	.	+	.	ID=gene-PKHYL_RS16580;Name=nqrM;gbkey=Gene;gene=nqrM;gene_biotype=protein_coding;locus_tag=PKHYL_RS16580;old_locus_tag=PKHYL_40220
NZ_AP019516.1	Protein Homology	CDS	3117999	3118259	.	+	0	ID=cds-WP_240365645.1;Parent=gene-PKHYL_RS16580;Dbxref=Genbank:WP_240365645.1;Name=WP_240365645.1;gbkey=CDS;gene=nqrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514732.1;locus_tag=PKHYL_RS16580;product=(Na+)-NQR maturation NqrM;protein_id=WP_240365645.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3118590	3119804	.	+	.	ID=gene-PKHYL_RS16585;Name=PKHYL_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16585;old_locus_tag=PKHYL_40230
NZ_AP019516.1	Protein Homology	CDS	3118590	3119804	.	+	0	ID=cds-WP_240365646.1;Parent=gene-PKHYL_RS16585;Dbxref=Genbank:WP_240365646.1;Name=WP_240365646.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444518.1;locus_tag=PKHYL_RS16585;product=MFS transporter;protein_id=WP_240365646.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3119994	3120830	.	+	.	ID=gene-PKHYL_RS16590;Name=PKHYL_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16590;old_locus_tag=PKHYL_40240
NZ_AP019516.1	Protein Homology	CDS	3119994	3120830	.	+	0	ID=cds-WP_240365647.1;Parent=gene-PKHYL_RS16590;Dbxref=Genbank:WP_240365647.1;Name=WP_240365647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444519.1;locus_tag=PKHYL_RS16590;product=arylesterase;protein_id=WP_240365647.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3120843	3121559	.	+	.	ID=gene-PKHYL_RS16595;Name=PKHYL_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16595;old_locus_tag=PKHYL_40250
NZ_AP019516.1	Protein Homology	CDS	3120843	3121559	.	+	0	ID=cds-WP_240365648.1;Parent=gene-PKHYL_RS16595;Dbxref=Genbank:WP_240365648.1;Name=WP_240365648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197284.1;locus_tag=PKHYL_RS16595;product=ABC transporter ATP-binding protein;protein_id=WP_240365648.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3121613	3124184	.	+	.	ID=gene-PKHYL_RS16600;Name=PKHYL_RS16600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16600;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3121613	3124184	.	+	0	ID=cds-PKHYL_RS16600;Parent=gene-PKHYL_RS16600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514736.1;locus_tag=PKHYL_RS16600;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3125272	3125973	.	+	.	ID=gene-PKHYL_RS16605;Name=PKHYL_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16605;old_locus_tag=PKHYL_40320
NZ_AP019516.1	Protein Homology	CDS	3125272	3125973	.	+	0	ID=cds-WP_071002696.1;Parent=gene-PKHYL_RS16605;Dbxref=Genbank:WP_071002696.1;Name=WP_071002696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444523.1;locus_tag=PKHYL_RS16605;product=hypothetical protein;protein_id=WP_071002696.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3126318	3127636	.	+	.	ID=gene-PKHYL_RS16610;Name=PKHYL_RS16610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16610;old_locus_tag=PKHYL_40340;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3126318	3127636	.	+	0	ID=cds-PKHYL_RS16610;Parent=gene-PKHYL_RS16610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281371.1;locus_tag=PKHYL_RS16610;product=valine--pyruvate transaminase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3128412	3128627	.	-	.	ID=gene-PKHYL_RS16615;Name=PKHYL_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16615;old_locus_tag=PKHYL_40350
NZ_AP019516.1	Protein Homology	CDS	3128412	3128627	.	-	0	ID=cds-WP_240365649.1;Parent=gene-PKHYL_RS16615;Dbxref=Genbank:WP_240365649.1;Name=WP_240365649.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024573.2;locus_tag=PKHYL_RS16615;product=AAA family ATPase;protein_id=WP_240365649.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3128953	3129882	.	-	.	ID=gene-PKHYL_RS16620;Name=PKHYL_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16620;old_locus_tag=PKHYL_40360
NZ_AP019516.1	Protein Homology	CDS	3128953	3129882	.	-	0	ID=cds-WP_240365650.1;Parent=gene-PKHYL_RS16620;Dbxref=Genbank:WP_240365650.1;Name=WP_240365650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197275.1;locus_tag=PKHYL_RS16620;product=DJ-1/PfpI family protein;protein_id=WP_240365650.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3130035	3130412	.	-	.	ID=gene-PKHYL_RS16625;Name=PKHYL_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16625;old_locus_tag=PKHYL_40370
NZ_AP019516.1	Protein Homology	CDS	3130035	3130412	.	-	0	ID=cds-WP_025645257.1;Parent=gene-PKHYL_RS16625;Dbxref=Genbank:WP_025645257.1;Name=WP_025645257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444525.1;locus_tag=PKHYL_RS16625;product=hypothetical protein;protein_id=WP_025645257.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3130583	3131218	.	-	.	ID=gene-PKHYL_RS16630;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=PKHYL_RS16630;old_locus_tag=PKHYL_40380
NZ_AP019516.1	Protein Homology	CDS	3130583	3131218	.	-	0	ID=cds-WP_093070311.1;Parent=gene-PKHYL_RS16630;Dbxref=Genbank:WP_093070311.1;Name=WP_093070311.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196730.1;locus_tag=PKHYL_RS16630;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_093070311.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3131403	3132049	.	-	.	ID=gene-PKHYL_RS16635;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=pseudogene;locus_tag=PKHYL_RS16635;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3131403	3132049	.	-	0	ID=cds-PKHYL_RS16635;Parent=gene-PKHYL_RS16635;Note=frameshifted;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281374.1;locus_tag=PKHYL_RS16635;product=imidazoleglycerol-phosphate dehydratase HisB;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3132443	3132793	.	+	.	ID=gene-PKHYL_RS16640;Name=PKHYL_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16640;old_locus_tag=PKHYL_40410
NZ_AP019516.1	GeneMarkS-2+	CDS	3132443	3132793	.	+	0	ID=cds-WP_240365651.1;Parent=gene-PKHYL_RS16640;Dbxref=Genbank:WP_240365651.1;Name=WP_240365651.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16640;product=hypothetical protein;protein_id=WP_240365651.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3132986	3133061	.	+	.	ID=gene-PKHYL_RS16645;Name=PKHYL_RS16645;gbkey=Gene;gene_biotype=tRNA;locus_tag=PKHYL_RS16645;old_locus_tag=PKHYL_t00500
NZ_AP019516.1	tRNAscan-SE	tRNA	3132986	3133061	.	+	.	ID=rna-PKHYL_RS16645;Parent=gene-PKHYL_RS16645;anticodon=(pos:3133019..3133021);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16645;product=tRNA-Phe
NZ_AP019516.1	tRNAscan-SE	exon	3132986	3133061	.	+	.	ID=exon-PKHYL_RS16645-1;Parent=rna-PKHYL_RS16645;anticodon=(pos:3133019..3133021);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PKHYL_RS16645;product=tRNA-Phe
NZ_AP019516.1	RefSeq	pseudogene	3133255	3133755	.	+	.	ID=gene-PKHYL_RS16650;Name=PKHYL_RS16650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16650;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3133255	3133755	.	+	0	ID=cds-PKHYL_RS16650;Parent=gene-PKHYL_RS16650;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444530.1;locus_tag=PKHYL_RS16650;product=DUF4385 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3133985	3134668	.	+	.	ID=gene-PKHYL_RS16655;Name=PKHYL_RS16655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16655;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3133985	3134668	.	+	0	ID=cds-PKHYL_RS16655;Parent=gene-PKHYL_RS16655;Note=frameshifted;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007394681.1;locus_tag=PKHYL_RS16655;product=phosphoglycolate phosphatase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3134718	3135163	.	-	.	ID=gene-PKHYL_RS16660;Name=PKHYL_RS16660;end_range=3135163,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16660;old_locus_tag=PKHYL_40450;partial=true;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3134718	3135163	.	-	0	ID=cds-PKHYL_RS16660;Parent=gene-PKHYL_RS16660;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3135163,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514745.1;locus_tag=PKHYL_RS16660;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3135304	3135753	.	+	.	ID=gene-PKHYL_RS16665;Name=PKHYL_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16665;old_locus_tag=PKHYL_40460
NZ_AP019516.1	Protein Homology	CDS	3135304	3135753	.	+	0	ID=cds-WP_240365652.1;Parent=gene-PKHYL_RS16665;Dbxref=Genbank:WP_240365652.1;Name=WP_240365652.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020305.2;locus_tag=PKHYL_RS16665;product=Tn7 transposase TnsA N-terminal domain-containing protein;protein_id=WP_240365652.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3136335	3136811	.	+	.	ID=gene-PKHYL_RS16670;Name=PKHYL_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16670;old_locus_tag=PKHYL_40500
NZ_AP019516.1	Protein Homology	CDS	3136335	3136811	.	+	0	ID=cds-WP_240365653.1;Parent=gene-PKHYL_RS16670;Dbxref=Genbank:WP_240365653.1;Name=WP_240365653.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024908.2;locus_tag=PKHYL_RS16670;product=helix-turn-helix domain-containing protein;protein_id=WP_240365653.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3136978	3137301	.	+	.	ID=gene-PKHYL_RS16675;Name=PKHYL_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16675;old_locus_tag=PKHYL_40510
NZ_AP019516.1	GeneMarkS-2+	CDS	3136978	3137301	.	+	0	ID=cds-WP_240365654.1;Parent=gene-PKHYL_RS16675;Dbxref=Genbank:WP_240365654.1;Name=WP_240365654.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16675;product=hypothetical protein;protein_id=WP_240365654.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3137481	3137897	.	+	.	ID=gene-PKHYL_RS16680;Name=PKHYL_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16680;old_locus_tag=PKHYL_40520
NZ_AP019516.1	Protein Homology	CDS	3137481	3137897	.	+	0	ID=cds-WP_240365655.1;Parent=gene-PKHYL_RS16680;Dbxref=Genbank:WP_240365655.1;Name=WP_240365655.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020859.2;locus_tag=PKHYL_RS16680;product=Mu transposase C-terminal domain-containing protein;protein_id=WP_240365655.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3137909	3138088	.	+	.	ID=gene-PKHYL_RS16685;Name=PKHYL_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16685;old_locus_tag=PKHYL_40530
NZ_AP019516.1	GeneMarkS-2+	CDS	3137909	3138088	.	+	0	ID=cds-WP_240365656.1;Parent=gene-PKHYL_RS16685;Dbxref=Genbank:WP_240365656.1;Name=WP_240365656.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16685;product=hypothetical protein;protein_id=WP_240365656.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3138088	3139038	.	+	.	ID=gene-PKHYL_RS16690;Name=PKHYL_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16690;old_locus_tag=PKHYL_40540
NZ_AP019516.1	Protein Homology	CDS	3138088	3139038	.	+	0	ID=cds-WP_240365657.1;Parent=gene-PKHYL_RS16690;Dbxref=Genbank:WP_240365657.1;Name=WP_240365657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004883671.1;locus_tag=PKHYL_RS16690;product=TniB family NTP-binding protein;protein_id=WP_240365657.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3139013	3139723	.	+	.	ID=gene-PKHYL_RS16695;Name=PKHYL_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16695;old_locus_tag=PKHYL_40550
NZ_AP019516.1	Protein Homology	CDS	3139013	3139723	.	+	0	ID=cds-WP_240365658.1;Parent=gene-PKHYL_RS16695;Dbxref=Genbank:WP_240365658.1;Name=WP_240365658.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018259.2;locus_tag=PKHYL_RS16695;product=TniQ family protein;protein_id=WP_240365658.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3140328	3140978	.	+	.	ID=gene-PKHYL_RS16700;Name=PKHYL_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16700;old_locus_tag=PKHYL_40560
NZ_AP019516.1	GeneMarkS-2+	CDS	3140328	3140978	.	+	0	ID=cds-WP_240365659.1;Parent=gene-PKHYL_RS16700;Dbxref=Genbank:WP_240365659.1;Name=WP_240365659.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16700;product=hypothetical protein;protein_id=WP_240365659.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3141225	3141500	.	+	.	ID=gene-PKHYL_RS16705;Name=PKHYL_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16705;old_locus_tag=PKHYL_40570
NZ_AP019516.1	Protein Homology	CDS	3141225	3141500	.	+	0	ID=cds-WP_240365660.1;Parent=gene-PKHYL_RS16705;Dbxref=Genbank:WP_240365660.1;Name=WP_240365660.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017691.2;locus_tag=PKHYL_RS16705;product=excalibur calcium-binding domain-containing protein;protein_id=WP_240365660.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3141503	3142369	.	+	.	ID=gene-PKHYL_RS16710;Name=PKHYL_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16710;old_locus_tag=PKHYL_40580
NZ_AP019516.1	Protein Homology	CDS	3141503	3142369	.	+	0	ID=cds-WP_240365661.1;Parent=gene-PKHYL_RS16710;Dbxref=Genbank:WP_240365661.1;Name=WP_240365661.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012774.2;locus_tag=PKHYL_RS16710;product=thermonuclease family protein;protein_id=WP_240365661.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3142496	3142732	.	-	.	ID=gene-PKHYL_RS16715;Name=PKHYL_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16715;old_locus_tag=PKHYL_40590
NZ_AP019516.1	GeneMarkS-2+	CDS	3142496	3142732	.	-	0	ID=cds-WP_240365662.1;Parent=gene-PKHYL_RS16715;Dbxref=Genbank:WP_240365662.1;Name=WP_240365662.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16715;product=hypothetical protein;protein_id=WP_240365662.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3142767	3143411	.	-	.	ID=gene-PKHYL_RS16720;Name=PKHYL_RS16720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16720;old_locus_tag=PKHYL_40600
NZ_AP019516.1	GeneMarkS-2+	CDS	3142767	3143411	.	-	0	ID=cds-WP_240365663.1;Parent=gene-PKHYL_RS16720;Dbxref=Genbank:WP_240365663.1;Name=WP_240365663.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16720;product=hypothetical protein;protein_id=WP_240365663.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3143910	3144134	.	-	.	ID=gene-PKHYL_RS16725;Name=PKHYL_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16725;old_locus_tag=PKHYL_40620
NZ_AP019516.1	GeneMarkS-2+	CDS	3143910	3144134	.	-	0	ID=cds-WP_240365664.1;Parent=gene-PKHYL_RS16725;Dbxref=Genbank:WP_240365664.1;Name=WP_240365664.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16725;product=hypothetical protein;protein_id=WP_240365664.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3144570	3145346	.	-	.	ID=gene-PKHYL_RS16730;Name=PKHYL_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16730;old_locus_tag=PKHYL_40630
NZ_AP019516.1	Protein Homology	CDS	3144570	3145346	.	-	0	ID=cds-WP_240365665.1;Parent=gene-PKHYL_RS16730;Dbxref=Genbank:WP_240365665.1;Name=WP_240365665.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=PKHYL_RS16730;product=ATP-binding cassette domain-containing protein;protein_id=WP_240365665.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3145315	3145794	.	-	.	ID=gene-PKHYL_RS16735;Name=PKHYL_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16735;old_locus_tag=PKHYL_40640
NZ_AP019516.1	Protein Homology	CDS	3145315	3145794	.	-	0	ID=cds-WP_240365666.1;Parent=gene-PKHYL_RS16735;Dbxref=Genbank:WP_240365666.1;Name=WP_240365666.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=PKHYL_RS16735;product=ATP-binding cassette domain-containing protein;protein_id=WP_240365666.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3145898	3146449	.	-	.	ID=gene-PKHYL_RS16740;Name=PKHYL_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16740;old_locus_tag=PKHYL_40650
NZ_AP019516.1	GeneMarkS-2+	CDS	3145898	3146449	.	-	0	ID=cds-WP_240365667.1;Parent=gene-PKHYL_RS16740;Dbxref=Genbank:WP_240365667.1;Name=WP_240365667.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16740;product=hypothetical protein;protein_id=WP_240365667.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3146449	3146694	.	-	.	ID=gene-PKHYL_RS16745;Name=PKHYL_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16745;old_locus_tag=PKHYL_40660
NZ_AP019516.1	GeneMarkS-2+	CDS	3146449	3146694	.	-	0	ID=cds-WP_240365668.1;Parent=gene-PKHYL_RS16745;Dbxref=Genbank:WP_240365668.1;Name=WP_240365668.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16745;product=hypothetical protein;protein_id=WP_240365668.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3147186	3147490	.	+	.	ID=gene-PKHYL_RS16750;Name=PKHYL_RS16750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16750;old_locus_tag=PKHYL_40670;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3147186	3147490	.	+	0	ID=cds-PKHYL_RS16750;Parent=gene-PKHYL_RS16750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005227789.1;locus_tag=PKHYL_RS16750;product=DUF4031 domain-containing protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3147504	3148502	.	+	.	ID=gene-PKHYL_RS16755;Name=PKHYL_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16755;old_locus_tag=PKHYL_40680
NZ_AP019516.1	Protein Homology	CDS	3147504	3148502	.	+	0	ID=cds-WP_240365669.1;Parent=gene-PKHYL_RS16755;Dbxref=Genbank:WP_240365669.1;Name=WP_240365669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004803735.1;locus_tag=PKHYL_RS16755;product=thymidylate synthase;protein_id=WP_240365669.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3148510	3149394	.	+	.	ID=gene-PKHYL_RS16760;Name=PKHYL_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16760;old_locus_tag=PKHYL_40690
NZ_AP019516.1	Protein Homology	CDS	3148510	3149394	.	+	0	ID=cds-WP_240365670.1;Parent=gene-PKHYL_RS16760;Dbxref=Genbank:WP_240365670.1;Name=WP_240365670.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037408.2;locus_tag=PKHYL_RS16760;product=hypothetical protein;protein_id=WP_240365670.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3149626	3149817	.	-	.	ID=gene-PKHYL_RS16765;Name=PKHYL_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16765;old_locus_tag=PKHYL_40700
NZ_AP019516.1	GeneMarkS-2+	CDS	3149626	3149817	.	-	0	ID=cds-WP_240365671.1;Parent=gene-PKHYL_RS16765;Dbxref=Genbank:WP_240365671.1;Name=WP_240365671.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16765;product=hypothetical protein;protein_id=WP_240365671.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3149798	3150193	.	-	.	ID=gene-PKHYL_RS16770;Name=PKHYL_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16770;old_locus_tag=PKHYL_40710
NZ_AP019516.1	GeneMarkS-2+	CDS	3149798	3150193	.	-	0	ID=cds-WP_240365672.1;Parent=gene-PKHYL_RS16770;Dbxref=Genbank:WP_240365672.1;Name=WP_240365672.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16770;product=hypothetical protein;protein_id=WP_240365672.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3150223	3150477	.	-	.	ID=gene-PKHYL_RS16775;Name=PKHYL_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16775;old_locus_tag=PKHYL_40720
NZ_AP019516.1	GeneMarkS-2+	CDS	3150223	3150477	.	-	0	ID=cds-WP_240365673.1;Parent=gene-PKHYL_RS16775;Dbxref=Genbank:WP_240365673.1;Name=WP_240365673.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16775;product=hypothetical protein;protein_id=WP_240365673.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3150904	3151289	.	+	.	ID=gene-PKHYL_RS16780;Name=PKHYL_RS16780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16780;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3150904	3151289	.	+	0	ID=cds-PKHYL_RS16780;Parent=gene-PKHYL_RS16780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005047286.1;locus_tag=PKHYL_RS16780;product=(deoxy)nucleoside triphosphate pyrophosphohydrolase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3151500	3151790	.	-	.	ID=gene-PKHYL_RS16785;Name=PKHYL_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16785;old_locus_tag=PKHYL_40760
NZ_AP019516.1	GeneMarkS-2+	CDS	3151500	3151790	.	-	0	ID=cds-WP_240365674.1;Parent=gene-PKHYL_RS16785;Dbxref=Genbank:WP_240365674.1;Name=WP_240365674.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16785;product=hypothetical protein;protein_id=WP_240365674.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3152098	3152373	.	-	.	ID=gene-PKHYL_RS16790;Name=PKHYL_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16790;old_locus_tag=PKHYL_40780
NZ_AP019516.1	GeneMarkS-2+	CDS	3152098	3152373	.	-	0	ID=cds-WP_240365675.1;Parent=gene-PKHYL_RS16790;Dbxref=Genbank:WP_240365675.1;Name=WP_240365675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16790;product=hypothetical protein;protein_id=WP_240365675.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3152461	3152775	.	-	.	ID=gene-PKHYL_RS16795;Name=PKHYL_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16795;old_locus_tag=PKHYL_40790
NZ_AP019516.1	GeneMarkS-2+	CDS	3152461	3152775	.	-	0	ID=cds-WP_240365676.1;Parent=gene-PKHYL_RS16795;Dbxref=Genbank:WP_240365676.1;Name=WP_240365676.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16795;product=hypothetical protein;protein_id=WP_240365676.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3153351	3153942	.	-	.	ID=gene-PKHYL_RS16800;Name=PKHYL_RS16800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16800;old_locus_tag=PKHYL_40800;partial=true;pseudo=true;start_range=.,3153351
NZ_AP019516.1	Protein Homology	CDS	3153351	3153942	.	-	0	ID=cds-PKHYL_RS16800;Parent=gene-PKHYL_RS16800;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003672554.1;locus_tag=PKHYL_RS16800;partial=true;product=ATP-dependent protease;pseudo=true;start_range=.,3153351;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3154241	3155811	.	+	.	ID=gene-PKHYL_RS16805;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=pseudogene;locus_tag=PKHYL_RS16805;old_locus_tag=PKHYL_40820;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3154241	3155811	.	+	0	ID=cds-PKHYL_RS16805;Parent=gene-PKHYL_RS16805;Note=frameshifted;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemN;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197240.1;locus_tag=PKHYL_RS16805;product=oxygen-independent coproporphyrinogen III oxidase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3155888	3156769	.	-	.	ID=gene-PKHYL_RS16810;Name=PKHYL_RS16810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16810;old_locus_tag=PKHYL_40830;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3155888	3156769	.	-	0	ID=cds-PKHYL_RS16810;Parent=gene-PKHYL_RS16810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005172085.1;locus_tag=PKHYL_RS16810;product=SPFH/Band 7/PHB domain protein;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3157004	3157456	.	-	.	ID=gene-PKHYL_RS16815;Name=PKHYL_RS16815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16815;old_locus_tag=PKHYL_40850;partial=true;pseudo=true;start_range=.,3157004
NZ_AP019516.1	Protein Homology	CDS	3157004	3157456	.	-	0	ID=cds-PKHYL_RS16815;Parent=gene-PKHYL_RS16815;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197232.1;locus_tag=PKHYL_RS16815;partial=true;product=NfeD family protein;pseudo=true;start_range=.,3157004;transl_table=11
NZ_AP019516.1	RefSeq	gene	3157649	3158152	.	-	.	ID=gene-PKHYL_RS16820;Name=PKHYL_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16820;old_locus_tag=PKHYL_40860
NZ_AP019516.1	Protein Homology	CDS	3157649	3158152	.	-	0	ID=cds-WP_240366560.1;Parent=gene-PKHYL_RS16820;Dbxref=Genbank:WP_240366560.1;Name=WP_240366560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514751.1;locus_tag=PKHYL_RS16820;product=porin family protein;protein_id=WP_240366560.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3158418	3158957	.	-	.	ID=gene-PKHYL_RS16825;Name=PKHYL_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16825;old_locus_tag=PKHYL_40870
NZ_AP019516.1	Protein Homology	CDS	3158418	3158957	.	-	0	ID=cds-WP_071002683.1;Parent=gene-PKHYL_RS16825;Dbxref=Genbank:WP_071002683.1;Name=WP_071002683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514751.1;locus_tag=PKHYL_RS16825;product=porin family protein;protein_id=WP_071002683.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3159254	3160474	.	+	.	ID=gene-PKHYL_RS16830;Name=PKHYL_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16830;old_locus_tag=PKHYL_40880
NZ_AP019516.1	Protein Homology	CDS	3159254	3160474	.	+	0	ID=cds-WP_240366561.1;Parent=gene-PKHYL_RS16830;Dbxref=Genbank:WP_240366561.1;Name=WP_240366561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005239334.1;locus_tag=PKHYL_RS16830;product=8-amino-7-oxononanoate synthase;protein_id=WP_240366561.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3160490	3160948	.	+	.	ID=gene-PKHYL_RS16835;Name=PKHYL_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16835;old_locus_tag=PKHYL_40890
NZ_AP019516.1	Protein Homology	CDS	3160490	3160948	.	+	0	ID=cds-WP_240365677.1;Parent=gene-PKHYL_RS16835;Dbxref=Genbank:WP_240365677.1;Name=WP_240365677.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF017238.2;locus_tag=PKHYL_RS16835;product=methyltransferase domain-containing protein;protein_id=WP_240365677.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3160989	3161384	.	+	.	ID=gene-PKHYL_RS16840;Name=PKHYL_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16840;old_locus_tag=PKHYL_40900
NZ_AP019516.1	GeneMarkS-2+	CDS	3160989	3161384	.	+	0	ID=cds-WP_240365678.1;Parent=gene-PKHYL_RS16840;Dbxref=Genbank:WP_240365678.1;Name=WP_240365678.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16840;product=hypothetical protein;protein_id=WP_240365678.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3161513	3163451	.	-	.	ID=gene-PKHYL_RS16845;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=pseudogene;locus_tag=PKHYL_RS16845;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3161513	3163451	.	-	0	ID=cds-PKHYL_RS16845;Parent=gene-PKHYL_RS16845;Note=frameshifted;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_004996671.1;locus_tag=PKHYL_RS16845;product=molecular chaperone DnaK;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3163636	3164235	.	-	.	ID=gene-PKHYL_RS16850;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=PKHYL_RS16850;old_locus_tag=PKHYL_40940
NZ_AP019516.1	Protein Homology	CDS	3163636	3164235	.	-	0	ID=cds-WP_186475348.1;Parent=gene-PKHYL_RS16850;Dbxref=Genbank:WP_186475348.1;Name=WP_186475348.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514755.1;locus_tag=PKHYL_RS16850;product=nucleotide exchange factor GrpE;protein_id=WP_186475348.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3164685	3165434	.	+	.	ID=gene-PKHYL_RS16855;Name=PKHYL_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16855;old_locus_tag=PKHYL_40950
NZ_AP019516.1	GeneMarkS-2+	CDS	3164685	3165434	.	+	0	ID=cds-WP_240365679.1;Parent=gene-PKHYL_RS16855;Dbxref=Genbank:WP_240365679.1;Name=WP_240365679.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16855;product=hypothetical protein;protein_id=WP_240365679.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3165317	3166078	.	+	.	ID=gene-PKHYL_RS16860;Name=PKHYL_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16860;old_locus_tag=PKHYL_40960
NZ_AP019516.1	Protein Homology	CDS	3165317	3166078	.	+	0	ID=cds-WP_240366562.1;Parent=gene-PKHYL_RS16860;Dbxref=Genbank:WP_240366562.1;Name=WP_240366562.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019474.2;locus_tag=PKHYL_RS16860;product=alpha/beta hydrolase;protein_id=WP_240366562.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3166096	3167232	.	-	.	ID=gene-PKHYL_RS16865;Name=PKHYL_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16865;old_locus_tag=PKHYL_40970
NZ_AP019516.1	Protein Homology	CDS	3166096	3167232	.	-	0	ID=cds-WP_240365680.1;Parent=gene-PKHYL_RS16865;Dbxref=Genbank:WP_240365680.1;Name=WP_240365680.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010197203.1;locus_tag=PKHYL_RS16865;product=metallophosphoesterase;protein_id=WP_240365680.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3167320	3167529	.	-	.	ID=gene-PKHYL_RS16870;Name=PKHYL_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16870
NZ_AP019516.1	Protein Homology	CDS	3167320	3167529	.	-	0	ID=cds-WP_240365681.1;Parent=gene-PKHYL_RS16870;Dbxref=Genbank:WP_240365681.1;Name=WP_240365681.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019938.2;locus_tag=PKHYL_RS16870;product=DUF1731 domain-containing protein;protein_id=WP_240365681.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3167583	3167843	.	-	.	ID=gene-PKHYL_RS16875;Name=PKHYL_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16875;old_locus_tag=PKHYL_40990
NZ_AP019516.1	GeneMarkS-2+	CDS	3167583	3167843	.	-	0	ID=cds-WP_240365682.1;Parent=gene-PKHYL_RS16875;Dbxref=Genbank:WP_240365682.1;Name=WP_240365682.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16875;product=hypothetical protein;protein_id=WP_240365682.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3167824	3168291	.	-	.	ID=gene-PKHYL_RS16880;Name=PKHYL_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16880;old_locus_tag=PKHYL_41000
NZ_AP019516.1	Protein Homology	CDS	3167824	3168291	.	-	0	ID=cds-WP_240365683.1;Parent=gene-PKHYL_RS16880;Dbxref=Genbank:WP_240365683.1;Name=WP_240365683.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF013530.2;locus_tag=PKHYL_RS16880;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_240365683.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3168616	3169248	.	-	.	ID=gene-PKHYL_RS16885;Name=PKHYL_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16885;old_locus_tag=PKHYL_41020
NZ_AP019516.1	Protein Homology	CDS	3168616	3169248	.	-	0	ID=cds-WP_240365684.1;Parent=gene-PKHYL_RS16885;Dbxref=Genbank:WP_240365684.1;Name=WP_240365684.1;Ontology_term=GO:0003725;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514760.1;locus_tag=PKHYL_RS16885;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=WP_240365684.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3169373	3169531	.	-	.	ID=gene-PKHYL_RS16890;Name=PKHYL_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16890;old_locus_tag=PKHYL_41030
NZ_AP019516.1	Protein Homology	CDS	3169373	3169531	.	-	0	ID=cds-WP_240365685.1;Parent=gene-PKHYL_RS16890;Dbxref=Genbank:WP_240365685.1;Name=WP_240365685.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036806.2;locus_tag=PKHYL_RS16890;product=hypothetical protein;protein_id=WP_240365685.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3169723	3170629	.	-	.	ID=gene-PKHYL_RS16895;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=pseudogene;locus_tag=PKHYL_RS16895;partial=true;pseudo=true;start_range=.,3169723
NZ_AP019516.1	Protein Homology	CDS	3169723	3170629	.	-	0	ID=cds-PKHYL_RS16895;Parent=gene-PKHYL_RS16895;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514761.1;locus_tag=PKHYL_RS16895;partial=true;product=DNA-processing protein DprA;pseudo=true;start_range=.,3169723;transl_table=11
NZ_AP019516.1	RefSeq	gene	3170687	3171832	.	-	.	ID=gene-PKHYL_RS16900;Name=PKHYL_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16900;old_locus_tag=PKHYL_41060
NZ_AP019516.1	Protein Homology	CDS	3170687	3171832	.	-	0	ID=cds-WP_240365686.1;Parent=gene-PKHYL_RS16900;Dbxref=Genbank:WP_240365686.1;Name=WP_240365686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281389.1;locus_tag=PKHYL_RS16900;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_240365686.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3172121	3173541	.	-	.	ID=gene-PKHYL_RS16905;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=pseudogene;locus_tag=PKHYL_RS16905;old_locus_tag=PKHYL_41070;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3172121	3173541	.	-	0	ID=cds-PKHYL_RS16905;Parent=gene-PKHYL_RS16905;Note=frameshifted;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444549.1;locus_tag=PKHYL_RS16905;product=threonine synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3173588	3175171	.	-	.	ID=gene-PKHYL_RS16910;Name=PKHYL_RS16910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16910;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3173588	3175171	.	-	0	ID=cds-PKHYL_RS16910;Parent=gene-PKHYL_RS16910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444550.1;locus_tag=PKHYL_RS16910;product=rRNA methyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3175252	3176341	.	-	.	ID=gene-PKHYL_RS16915;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=pseudogene;locus_tag=PKHYL_RS16915;old_locus_tag=PKHYL_41120;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3175252	3176341	.	-	0	ID=cds-PKHYL_RS16915;Parent=gene-PKHYL_RS16915;Note=frameshifted;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444551.1;locus_tag=PKHYL_RS16915;product=methionyl-tRNA formyltransferase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3176656	3177231	.	+	.	ID=gene-PKHYL_RS16920;Name=PKHYL_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16920;old_locus_tag=PKHYL_41140
NZ_AP019516.1	GeneMarkS-2+	CDS	3176656	3177231	.	+	0	ID=cds-WP_240365687.1;Parent=gene-PKHYL_RS16920;Dbxref=Genbank:WP_240365687.1;Name=WP_240365687.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16920;product=hypothetical protein;protein_id=WP_240365687.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3177304	3178137	.	+	.	ID=gene-PKHYL_RS16925;Name=PKHYL_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16925;old_locus_tag=PKHYL_41150
NZ_AP019516.1	GeneMarkS-2+	CDS	3177304	3178137	.	+	0	ID=cds-WP_240365688.1;Parent=gene-PKHYL_RS16925;Dbxref=Genbank:WP_240365688.1;Name=WP_240365688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16925;product=PAS domain-containing protein;protein_id=WP_240365688.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3178213	3178452	.	+	.	ID=gene-PKHYL_RS16930;Name=PKHYL_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16930;old_locus_tag=PKHYL_41160
NZ_AP019516.1	GeneMarkS-2+	CDS	3178213	3178452	.	+	0	ID=cds-WP_240365689.1;Parent=gene-PKHYL_RS16930;Dbxref=Genbank:WP_240365689.1;Name=WP_240365689.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PKHYL_RS16930;product=hypothetical protein;protein_id=WP_240365689.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3178494	3179486	.	+	.	ID=gene-PKHYL_RS16935;Name=PKHYL_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PKHYL_RS16935;old_locus_tag=PKHYL_41170
NZ_AP019516.1	Protein Homology	CDS	3178494	3179486	.	+	0	ID=cds-WP_240365690.1;Parent=gene-PKHYL_RS16935;Dbxref=Genbank:WP_240365690.1;Name=WP_240365690.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=PKHYL_RS16935;product=response regulator;protein_id=WP_240365690.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3179712	3180385	.	-	.	ID=gene-PKHYL_RS16940;Name=PKHYL_RS16940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PKHYL_RS16940;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3179712	3180385	.	-	0	ID=cds-PKHYL_RS16940;Parent=gene-PKHYL_RS16940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009508412.1;locus_tag=PKHYL_RS16940;product=riboflavin synthase;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3180807	3181861	.	-	.	ID=gene-PKHYL_RS16945;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=pseudogene;locus_tag=PKHYL_RS16945;old_locus_tag=PKHYL_41200;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3180807	3181861	.	-	0	ID=cds-PKHYL_RS16945;Parent=gene-PKHYL_RS16945;Note=frameshifted;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281394.1;locus_tag=PKHYL_RS16945;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3181975	3182433	.	-	.	ID=gene-PKHYL_RS16950;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=PKHYL_RS16950;old_locus_tag=PKHYL_41210
NZ_AP019516.1	Protein Homology	CDS	3181975	3182433	.	-	0	ID=cds-WP_071002667.1;Parent=gene-PKHYL_RS16950;Dbxref=Genbank:WP_071002667.1;Name=WP_071002667.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444555.1;locus_tag=PKHYL_RS16950;product=transcriptional regulator NrdR;protein_id=WP_071002667.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3182521	3183958	.	-	.	ID=gene-PKHYL_RS16955;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=pseudogene;locus_tag=PKHYL_RS16955;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3182521	3183958	.	-	0	ID=cds-PKHYL_RS16955;Parent=gene-PKHYL_RS16955;Note=frameshifted;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281396.1;locus_tag=PKHYL_RS16955;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3184166	3185848	.	-	.	ID=gene-PKHYL_RS16960;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=pseudogene;locus_tag=PKHYL_RS16960;old_locus_tag=PKHYL_41250;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3184166	3185848	.	-	0	ID=cds-PKHYL_RS16960;Parent=gene-PKHYL_RS16960;Note=frameshifted;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011281397.1;locus_tag=PKHYL_RS16960;product=membrane protein insertase YidC;pseudo=true;transl_table=11
NZ_AP019516.1	RefSeq	gene	3186064	3186432	.	-	.	ID=gene-PKHYL_RS16965;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=PKHYL_RS16965
NZ_AP019516.1	Protein Homology	CDS	3186064	3186432	.	-	0	ID=cds-WP_093070248.1;Parent=gene-PKHYL_RS16965;Dbxref=Genbank:WP_093070248.1;Name=WP_093070248.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514772.1;locus_tag=PKHYL_RS16965;product=membrane protein insertion efficiency factor YidD;protein_id=WP_093070248.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3186491	3186805	.	-	.	ID=gene-PKHYL_RS16970;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=PKHYL_RS16970;old_locus_tag=PKHYL_41260
NZ_AP019516.1	Protein Homology	CDS	3186491	3186805	.	-	0	ID=cds-WP_240365691.1;Parent=gene-PKHYL_RS16970;Dbxref=Genbank:WP_240365691.1;Name=WP_240365691.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: protein motif:HMM:NF013022.2;locus_tag=PKHYL_RS16970;product=ribonuclease P protein component;protein_id=WP_240365691.1;transl_table=11
NZ_AP019516.1	RefSeq	gene	3186992	3187126	.	-	.	ID=gene-PKHYL_RS16975;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=PKHYL_RS16975;old_locus_tag=PKHYL_41270
NZ_AP019516.1	Protein Homology	CDS	3186992	3187126	.	-	0	ID=cds-WP_007394757.1;Parent=gene-PKHYL_RS16975;Dbxref=Genbank:WP_007394757.1;Name=WP_007394757.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000831329.1;locus_tag=PKHYL_RS16975;product=50S ribosomal protein L34;protein_id=WP_007394757.1;transl_table=11
NZ_AP019516.1	RefSeq	pseudogene	3187717	3189165	.	+	.	ID=gene-PKHYL_RS00005;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=pseudogene;locus_tag=PKHYL_RS00005;pseudo=true
NZ_AP019516.1	Protein Homology	CDS	3187717	3189165	.	+	0	ID=cds-PKHYL_RS00005;Parent=gene-PKHYL_RS00005;Note=frameshifted;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011279314.1;locus_tag=PKHYL_RS00005;product=chromosomal replication initiator protein DnaA;pseudo=true;transl_table=11
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