locus-tag	class	description
RAHAQ_RS00010	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
RAHAQ_RS00015	COG0592	DNA-directed DNA polymerase activity
RAHAQ_RS00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
RAHAQ_RS00030	COG0561	phosphatase activity
RAHAQ_RS00035	COG0823	Involved in the tonB-independent uptake of proteins
RAHAQ_RS00040	COG5645	(Lipo)protein
RAHAQ_RS00050	COG0071	Belongs to the small heat shock protein (HSP20) family
RAHAQ_RS00060	COG3977	Valine--pyruvate aminotransferase
RAHAQ_RS00070	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
RAHAQ_RS00075	COG2271	Major facilitator Superfamily
RAHAQ_RS00085	COG1609	Transcriptional regulator
RAHAQ_RS00090	COG2211	Major facilitator Superfamily
RAHAQ_RS00105	COG2885	chlorophyll binding
RAHAQ_RS00115	COG2818	Glycosylase
RAHAQ_RS00130	COG2026	Addiction module toxin, RelE StbE family
RAHAQ_RS00135	COG0752	glycyl-tRNA synthetase alpha subunit
RAHAQ_RS00140	COG0751	glycine-tRNA ligase activity
RAHAQ_RS00160	COG2131	deaminase
RAHAQ_RS00165	COG2213	PTS system mannitol-specific
RAHAQ_RS00165	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
RAHAQ_RS00170	COG0246	Mannitol dehydrogenase
RAHAQ_RS00175	COG3722	fumarate hydratase activity
RAHAQ_RS00185	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RAHAQ_RS00195	COG2258	MOSC domain
RAHAQ_RS00200	COG0840	transmembrane signaling receptor activity
RAHAQ_RS00215	COG0243	molybdopterin cofactor binding
RAHAQ_RS00215	COG3383	formate dehydrogenase (NAD+) activity
RAHAQ_RS00220	COG0437	4 iron, 4 sulfur cluster binding
RAHAQ_RS00225	COG2864	formate dehydrogenase
RAHAQ_RS00235	COG0625	glutathione transferase activity
RAHAQ_RS00240	COG1012	belongs to the aldehyde dehydrogenase family
RAHAQ_RS00250	COG3274	enterobacterial common antigen metabolic process
RAHAQ_RS00270	COG1063	alcohol dehydrogenase
RAHAQ_RS00275	COG3135	benzoate transporter
RAHAQ_RS00280	COG1396	sequence-specific DNA binding
RAHAQ_RS00300	COG0625	glutathione transferase activity
RAHAQ_RS00310	COG1280	lysine exporter protein (LysE YggA)
RAHAQ_RS00320	COG2261	transglycosylase associated protein
RAHAQ_RS00340	COG1129	ABC transporter
RAHAQ_RS00390	COG1846	Transcriptional regulator
RAHAQ_RS00395	COG1764	response to oxidative stress
RAHAQ_RS00400	COG2194	sulfuric ester hydrolase activity
RAHAQ_RS00425	COG2079	MmgE PrpD family protein
RAHAQ_RS00430	COG4608	Belongs to the ABC transporter superfamily
RAHAQ_RS00435	COG0444	Belongs to the ABC transporter superfamily
RAHAQ_RS00440	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RAHAQ_RS00445	COG0601	transmembrane transport
RAHAQ_RS00455	COG1473	amidohydrolase
RAHAQ_RS00460	COG0583	DNA-binding transcription factor activity
RAHAQ_RS00465	COG0747	negative chemotaxis
RAHAQ_RS00470	COG0601	transmembrane transport
RAHAQ_RS00475	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RAHAQ_RS00480	COG0444	Belongs to the ABC transporter superfamily
RAHAQ_RS00485	COG4608	Belongs to the ABC transporter superfamily
RAHAQ_RS00505	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
RAHAQ_RS00515	COG0457	Tetratricopeptide repeat
RAHAQ_RS00520	COG1215	transferase activity, transferring glycosyl groups
RAHAQ_RS00525	COG1215	transferase activity, transferring glycosyl groups
RAHAQ_RS00530	COG0489	protein tyrosine kinase activity
RAHAQ_RS00540	COG2200	EAL domain
RAHAQ_RS00540	COG2199	diguanylate cyclase activity
RAHAQ_RS00545	COG1301	dicarboxylic acid transport
RAHAQ_RS00550	COG0612	Peptidase, M16
RAHAQ_RS00555	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RAHAQ_RS00560	COG1942	4-Oxalocrotonate Tautomerase
RAHAQ_RS00565	COG2200	EAL domain
RAHAQ_RS00570	COG2982	Protein involved in outer membrane biogenesis
RAHAQ_RS00575	COG2134	cdp-diacylglycerol pyrophosphatase
RAHAQ_RS00580	COG0477	Major facilitator Superfamily
RAHAQ_RS00585	COG1295	ribonuclease BN
RAHAQ_RS00590	COG0583	DNA-binding transcription factor activity
RAHAQ_RS00595	COG1028	Short-chain dehydrogenase reductase Sdr
RAHAQ_RS00605	COG3038	cytochrome b561
RAHAQ_RS00625	COG0579	oxidoreductase
RAHAQ_RS00660	COG0579	oxidoreductase
RAHAQ_RS00665	COG0531	amino acid
RAHAQ_RS00670	COG2731	YhcH YjgK YiaL family protein
RAHAQ_RS00675	COG3250	beta-galactosidase activity
RAHAQ_RS00680	COG1609	Transcriptional regulator
RAHAQ_RS00690	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
RAHAQ_RS00690	COG3408	Glycogen debranching enzyme
RAHAQ_RS00705	COG0339	signal peptide processing
RAHAQ_RS00710	COG2169	Transcriptional regulator
RAHAQ_RS00710	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
RAHAQ_RS00720	COG2814	Major facilitator Superfamily
RAHAQ_RS00730	COG1309	transcriptional regulator
RAHAQ_RS00740	COG1132	(ABC) transporter
RAHAQ_RS00755	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
RAHAQ_RS00760	COG1942	4-Oxalocrotonate Tautomerase
RAHAQ_RS00770	COG3037	sugar-specific permease SgaT UlaA
RAHAQ_RS00780	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
RAHAQ_RS00790	COG3684	Belongs to the aldolase LacD family
RAHAQ_RS00795	COG2390	Transcriptional regulator
RAHAQ_RS00805	COG0545	Peptidyl-prolyl cis-trans isomerase
RAHAQ_RS00815	COG1335	isochorismatase
RAHAQ_RS00830	COG0583	DNA-binding transcription factor activity
RAHAQ_RS00840	COG0322	excinuclease ABC activity
RAHAQ_RS00850	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
RAHAQ_RS00855	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
RAHAQ_RS00860	COG0339	signal peptide processing
RAHAQ_RS00865	COG0742	ribosomal rna small subunit methyltransferase
RAHAQ_RS00870	COG0589	response to stress
RAHAQ_RS00880	COG0306	phosphate transporter
RAHAQ_RS00885	COG2081	HI0933 family
RAHAQ_RS00895	COG0840	transmembrane signaling receptor activity
RAHAQ_RS00905	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
RAHAQ_RS00915	COG0477	Major facilitator Superfamily
RAHAQ_RS00920	COG1247	-acetyltransferase
RAHAQ_RS00935	COG1741	Belongs to the pirin family
RAHAQ_RS00945	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
RAHAQ_RS00955	COG2723	6-phospho-beta-galactosidase activity
RAHAQ_RS00960	COG1609	Transcriptional regulator
RAHAQ_RS00965	COG1609	Transcriptional regulator
RAHAQ_RS00970	COG3265	gluconokinase activity
RAHAQ_RS00975	COG2610	gluconate transmembrane transporter activity
RAHAQ_RS00990	COG2095	MarC family integral membrane protein
RAHAQ_RS00995	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
RAHAQ_RS01000	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
RAHAQ_RS01005	COG1523	belongs to the glycosyl hydrolase 13 family
RAHAQ_RS01010	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
RAHAQ_RS01015	COG0297	glycogen (starch) synthase activity
RAHAQ_RS01020	COG0058	SHG alpha-glucan phosphorylase activity
RAHAQ_RS01025	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
RAHAQ_RS01030	COG1349	DNA-binding transcription factor activity
RAHAQ_RS01035	COG0705	Rhomboid family
RAHAQ_RS01055	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
RAHAQ_RS01100	COG0058	SHG alpha-glucan phosphorylase activity
RAHAQ_RS01105	COG1640	4-alpha-glucanotransferase
RAHAQ_RS01110	COG0316	Belongs to the HesB IscA family
RAHAQ_RS01110	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
RAHAQ_RS01120	COG2267	carboxylic ester hydrolase activity
RAHAQ_RS01155	COG0679	Auxin Efflux Carrier
RAHAQ_RS01165	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
RAHAQ_RS01185	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
RAHAQ_RS01190	COG1918	ferrous iron import across plasma membrane
RAHAQ_RS01195	COG2183	response to ionizing radiation
RAHAQ_RS01200	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
RAHAQ_RS01205	COG2373	Large extracellular alpha-helical protein
RAHAQ_RS01210	COG4953	penicillin-binding protein 1C
RAHAQ_RS01215	COG3539	Fimbrial protein
RAHAQ_RS01220	COG3188	usher protein
RAHAQ_RS01225	COG3121	Chaperone
RAHAQ_RS01230	COG3539	Fimbrial protein
RAHAQ_RS01270	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
RAHAQ_RS01275	COG1011	Hydrolase
RAHAQ_RS01285	COG0494	nUDIX hydrolase
RAHAQ_RS01290	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
RAHAQ_RS01310	COG4796	Type ii and iii secretion system protein
RAHAQ_RS01315	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
RAHAQ_RS01320	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
RAHAQ_RS01335	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
RAHAQ_RS01340	COG0546	phosphoglycolate phosphatase activity
RAHAQ_RS01345	COG0180	Tryptophanyl-tRNA synthetase
RAHAQ_RS01355	COG2146	nitrite reductase [NAD(P)H] activity
RAHAQ_RS01360	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
RAHAQ_RS01365	COG0402	S-adenosylhomocysteine deaminase activity
RAHAQ_RS01370	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
RAHAQ_RS01375	COG0433	COG0433 Predicted ATPase
RAHAQ_RS01405	COG1289	transmembrane transporter activity
RAHAQ_RS01410	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RAHAQ_RS01415	COG1765	OsmC-like protein
RAHAQ_RS01420	COG3954	Phosphoribulokinase
RAHAQ_RS01425	COG0583	DNA-binding transcription factor activity
RAHAQ_RS01440	COG3960	tartronate-semialdehyde synthase activity
RAHAQ_RS01445	COG3622	Belongs to the hyi family
RAHAQ_RS01450	COG2084	Dehydrogenase
RAHAQ_RS01455	COG1953	Uracil, thiamine, allantoin
RAHAQ_RS01465	COG2233	PERMEase
RAHAQ_RS01470	COG1929	Belongs to the glycerate kinase type-1 family
RAHAQ_RS01475	COG3257	ureidoglycine aminohydrolase activity
RAHAQ_RS01480	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
RAHAQ_RS01485	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
RAHAQ_RS01490	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
RAHAQ_RS01495	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
RAHAQ_RS01505	COG0549	Belongs to the carbamate kinase family
RAHAQ_RS01510	COG3089	Belongs to the UPF0270 family
RAHAQ_RS01515	COG0429	hydrolase of the alpha beta-hydrolase fold
RAHAQ_RS01525	COG0488	(ABC) transporter
RAHAQ_RS01530	COG2249	NAD(P)H dehydrogenase (quinone) activity
RAHAQ_RS01540	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
RAHAQ_RS01545	COG1047	Peptidyl-prolyl cis-trans
RAHAQ_RS01555	COG0545	Peptidyl-prolyl cis-trans isomerase
RAHAQ_RS01560	COG2964	Protein conserved in bacteria
RAHAQ_RS01575	COG2168	tRNA wobble position uridine thiolation
RAHAQ_RS01580	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
RAHAQ_RS01585	COG0049	tRNA binding
RAHAQ_RS01590	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
RAHAQ_RS01595	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
RAHAQ_RS01605	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
RAHAQ_RS01630	COG2165	general secretion pathway protein
RAHAQ_RS01635	COG2165	general secretion pathway protein
RAHAQ_RS01640	COG2165	general secretion pathway protein
RAHAQ_RS01645	COG1459	type II secretion system
RAHAQ_RS01650	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
RAHAQ_RS01655	COG1450	Type ii and iii secretion system protein
RAHAQ_RS01665	COG3409	Peptidoglycan-binding domain 1 protein
RAHAQ_RS01665	COG3267	Type II secretory pathway component ExeA
RAHAQ_RS01675	COG0051	transcription antitermination factor activity, RNA binding
RAHAQ_RS01680	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
RAHAQ_RS01685	COG0088	Forms part of the polypeptide exit tunnel
RAHAQ_RS01690	COG0089	rRNA binding
RAHAQ_RS01700	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
RAHAQ_RS01705	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
RAHAQ_RS01715	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
RAHAQ_RS01725	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
RAHAQ_RS01730	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
RAHAQ_RS01745	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
RAHAQ_RS01750	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
RAHAQ_RS01760	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
RAHAQ_RS01765	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
RAHAQ_RS01770	COG1841	ribosomal large subunit assembly
RAHAQ_RS01780	COG0201	protein transport
RAHAQ_RS01785	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
RAHAQ_RS01790	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
RAHAQ_RS01795	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
RAHAQ_RS01800	COG0202	RNA polymerase activity
RAHAQ_RS01805	COG0203	ribosomal protein L17
RAHAQ_RS01815	COG0789	Transcriptional regulator
RAHAQ_RS01820	COG3036	rescue of stalled ribosome
RAHAQ_RS01825	COG1970	mechanosensitive ion channel activity
RAHAQ_RS01835	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
RAHAQ_RS01835	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
RAHAQ_RS01840	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
RAHAQ_RS01845	COG0242	peptide deformylase activity
RAHAQ_RS01850	COG0758	DNA mediated transformation
RAHAQ_RS01855	COG2922	Belongs to the Smg family
RAHAQ_RS01860	COG0551	DNA topoisomerase type I activity
RAHAQ_RS01865	COG0009	L-threonylcarbamoyladenylate synthase
RAHAQ_RS01870	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
RAHAQ_RS01875	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
RAHAQ_RS01915	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
RAHAQ_RS01920	COG3162	membrane
RAHAQ_RS01925	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
RAHAQ_RS01930	COG3539	Fimbrial protein
RAHAQ_RS01935	COG3188	usher protein
RAHAQ_RS01940	COG3121	Chaperone
RAHAQ_RS01970	COG2271	Major facilitator Superfamily
RAHAQ_RS01975	COG4948	Mandelate Racemase Muconate Lactonizing
RAHAQ_RS01985	COG1309	transcriptional regulator
RAHAQ_RS01990	COG4232	protein-disulfide reductase activity
RAHAQ_RS01995	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
RAHAQ_RS02010	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
RAHAQ_RS02030	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
RAHAQ_RS02040	COG5510	response to toxic substance
RAHAQ_RS02045	COG3040	lipid binding
RAHAQ_RS02055	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
RAHAQ_RS02060	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
RAHAQ_RS02065	COG1053	succinate dehydrogenase
RAHAQ_RS02070	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
RAHAQ_RS02075	COG2233	PERMEase
RAHAQ_RS02085	COG1511	domain protein
RAHAQ_RS02085	COG3264	Mechanosensitive ion channel
RAHAQ_RS02095	COG1162	GTPase activity
RAHAQ_RS02100	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
RAHAQ_RS02120	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
RAHAQ_RS02125	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
RAHAQ_RS02125	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
RAHAQ_RS02130	COG0802	atpase or kinase
RAHAQ_RS02135	COG0860	N-Acetylmuramoyl-L-alanine amidase
RAHAQ_RS02140	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
RAHAQ_RS02145	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
RAHAQ_RS02150	COG1923	regulation of RNA biosynthetic process
RAHAQ_RS02155	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
RAHAQ_RS02160	COG0330	HflC and HflK could
RAHAQ_RS02165	COG0330	HflC and HflK could
RAHAQ_RS02170	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
RAHAQ_RS02175	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
RAHAQ_RS02185	COG0557	exoribonuclease II activity
RAHAQ_RS02190	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
RAHAQ_RS02195	COG1960	acyl-CoA dehydrogenase activity
RAHAQ_RS02205	COG0840	transmembrane signaling receptor activity
RAHAQ_RS02210	COG1073	alpha beta
RAHAQ_RS02215	COG0360	Binds together with S18 to 16S ribosomal RNA
RAHAQ_RS02220	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
RAHAQ_RS02225	COG0359	binds to the 23S rRNA
RAHAQ_RS02230	COG3061	Opacity-associated protein A
RAHAQ_RS02235	COG0545	Peptidyl-prolyl cis-trans isomerase
RAHAQ_RS02245	COG0737	Belongs to the 5'-nucleotidase family
RAHAQ_RS02255	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
RAHAQ_RS02265	COG1253	flavin adenine dinucleotide binding
RAHAQ_RS02270	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
RAHAQ_RS02275	COG0729	surface antigen
RAHAQ_RS02285	COG2105	PFAM AIG2 family protein
RAHAQ_RS02290	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
RAHAQ_RS02300	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
RAHAQ_RS02305	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
RAHAQ_RS02335	COG0142	geranyltranstransferase activity
RAHAQ_RS02340	COG0261	This protein binds to 23S rRNA in the presence of protein L20
RAHAQ_RS02350	COG0697	spore germination
RAHAQ_RS02355	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
RAHAQ_RS02360	COG3385	transposase activity
RAHAQ_RS02365	COG0642	Histidine kinase
RAHAQ_RS02370	COG0745	RESPONSE REGULATOR receiver
RAHAQ_RS02375	COG2027	D-alanyl-D-alanine carboxypeptidase
RAHAQ_RS02385	COG1534	Rna-binding protein
RAHAQ_RS02390	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
RAHAQ_RS02400	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
RAHAQ_RS02405	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
RAHAQ_RS02410	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
RAHAQ_RS02425	COG0779	Required for maturation of 30S ribosomal subunits
RAHAQ_RS02430	COG0195	Participates in both transcription termination and antitermination
RAHAQ_RS02440	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
RAHAQ_RS02445	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
RAHAQ_RS02450	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
RAHAQ_RS02455	COG1185	polyribonucleotide nucleotidyltransferase activity
RAHAQ_RS02465	COG0513	Belongs to the DEAD box helicase family
RAHAQ_RS02470	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RAHAQ_RS02490	COG0826	peptidase U32
RAHAQ_RS02495	COG0826	peptidase U32
RAHAQ_RS02500	COG3154	lipid carrier protein
RAHAQ_RS02505	COG3153	acetyltransferase
RAHAQ_RS02515	COG3787	Belongs to the UPF0306 family
RAHAQ_RS02520	COG0702	epimerase
RAHAQ_RS02525	COG0110	maltose O-acetyltransferase activity
RAHAQ_RS02530	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
RAHAQ_RS02535	COG3454	Phosphonate metabolism
RAHAQ_RS02540	COG4778	phosphonate C-P lyase system protein PhnL
RAHAQ_RS02545	COG4107	phosphonate C-P lyase system protein PhnK
RAHAQ_RS02550	COG3627	carbon phosphorus lyase activity
RAHAQ_RS02555	COG3626	phosphonate metabolism
RAHAQ_RS02560	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
RAHAQ_RS02565	COG3624	Phosphonate C-P lyase system protein PhnG
RAHAQ_RS02570	COG2188	Transcriptional regulator
RAHAQ_RS02585	COG0602	queuosine metabolic process
RAHAQ_RS02595	COG0366	Alpha amylase catalytic
RAHAQ_RS02600	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RAHAQ_RS02600	COG1263	PTS System
RAHAQ_RS02605	COG1609	Transcriptional regulator
RAHAQ_RS02610	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
RAHAQ_RS02615	COG0861	Integral membrane protein TerC family
RAHAQ_RS02620	COG0519	Catalyzes the synthesis of GMP from XMP
RAHAQ_RS02620	COG0518	GMP synthase (glutamine-hydrolyzing) activity
RAHAQ_RS02625	COG0673	inositol 2-dehydrogenase activity
RAHAQ_RS02630	COG1451	nucleotide metabolic process
RAHAQ_RS02635	COG2813	Specifically methylates the guanine in position
RAHAQ_RS02640	COG0446	pyridine nucleotide-disulphide oxidoreductase
RAHAQ_RS02640	COG1902	pentaerythritol trinitrate reductase activity
RAHAQ_RS02645	COG1024	Enoyl-CoA hydratase
RAHAQ_RS02650	COG5001	Diguanylate cyclase
RAHAQ_RS02665	COG2909	trisaccharide binding
RAHAQ_RS02670	COG0058	SHG alpha-glucan phosphorylase activity
RAHAQ_RS02675	COG1640	4-alpha-glucanotransferase
RAHAQ_RS02685	COG3833	ABC-type maltose transport systems, permease component
RAHAQ_RS02690	COG1175	transmembrane transport
RAHAQ_RS02695	COG2182	Extracellular solute-binding protein
RAHAQ_RS02705	COG4580	involved in the transport of maltose and maltodextrins
RAHAQ_RS02730	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
RAHAQ_RS02740	COG4771	TonB-dependent receptor
RAHAQ_RS02745	COG2382	esterase
RAHAQ_RS02750	COG1120	ATPase activity
RAHAQ_RS02755	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RAHAQ_RS02760	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RAHAQ_RS02765	COG4592	Periplasmic binding protein
RAHAQ_RS02775	COG4974	Belongs to the 'phage' integrase family
RAHAQ_RS02815	COG4974	Belongs to the 'phage' integrase family
RAHAQ_RS02875	COG4695	Portal protein
RAHAQ_RS03020	COG3663	DNA glycosylase
RAHAQ_RS03045	COG0358	DNA primase activity
RAHAQ_RS03050	COG0828	Belongs to the bacterial ribosomal protein bS21 family
RAHAQ_RS03065	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
RAHAQ_RS03070	COG1968	undecaprenyl-diphosphatase activity
RAHAQ_RS03075	COG0617	tRNA 3'-terminal CCA addition
RAHAQ_RS03080	COG4991	sh3 domain protein
RAHAQ_RS03085	COG3025	triphosphatase activity
RAHAQ_RS03090	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
RAHAQ_RS03095	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
RAHAQ_RS03095	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
RAHAQ_RS03100	COG0531	amino acid
RAHAQ_RS03105	COG2960	long-chain fatty acid transporting porin activity
RAHAQ_RS03110	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
RAHAQ_RS03120	COG3384	dioxygenase
RAHAQ_RS03125	COG0754	glutathionylspermidine amidase activity
RAHAQ_RS03130	COG5463	Belongs to the UPF0441 family
RAHAQ_RS03135	COG1538	Outer membrane efflux protein
RAHAQ_RS03140	COG0494	nUDIX hydrolase
RAHAQ_RS03145	COG3151	Protein conserved in bacteria
RAHAQ_RS03150	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
RAHAQ_RS03155	COG3150	esterase
RAHAQ_RS03160	COG0187	DNA topoisomerase II activity
RAHAQ_RS03165	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
RAHAQ_RS03170	COG2249	NAD(P)H dehydrogenase (quinone) activity
RAHAQ_RS03185	COG2132	Multicopper oxidase
RAHAQ_RS03190	COG0656	L-ascorbic acid biosynthetic process
RAHAQ_RS03195	COG1064	alcohol dehydrogenase
RAHAQ_RS03200	COG2207	Transcriptional regulator
RAHAQ_RS03205	COG0586	Pfam SNARE associated Golgi protein
RAHAQ_RS03210	COG0626	cystathionine gamma-synthase activity
RAHAQ_RS03225	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
RAHAQ_RS03235	COG0848	biopolymer transport protein
RAHAQ_RS03240	COG2721	sulfolactate sulfo-lyase activity
RAHAQ_RS03245	COG2271	Major facilitator Superfamily
RAHAQ_RS03255	COG2084	Dehydrogenase
RAHAQ_RS03260	COG1929	Belongs to the glycerate kinase type-1 family
RAHAQ_RS03275	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
RAHAQ_RS03280	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
RAHAQ_RS03285	COG3956	TIGRFAM MazG family protein
RAHAQ_RS03290	COG0504	CTP synthase activity
RAHAQ_RS03295	COG0148	phosphopyruvate hydratase activity
RAHAQ_RS03300	COG3385	transposase activity
RAHAQ_RS03310	COG2190	(PTS) system
RAHAQ_RS03310	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RAHAQ_RS03310	COG1263	PTS System
RAHAQ_RS03315	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
RAHAQ_RS03320	COG0602	queuosine metabolic process
RAHAQ_RS03325	COG0720	synthase
RAHAQ_RS03335	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
RAHAQ_RS03340	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
RAHAQ_RS03345	COG0175	sulfate reduction
RAHAQ_RS03350	COG2234	aminopeptidase activity
RAHAQ_RS03355	COG1648	precorrin-2 dehydrogenase activity
RAHAQ_RS03355	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
RAHAQ_RS03365	COG2895	sulfate adenylyltransferase (ATP) activity
RAHAQ_RS03370	COG0529	Catalyzes the synthesis of activated sulfate
RAHAQ_RS03380	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
RAHAQ_RS03390	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
RAHAQ_RS03395	COG0585	pseudouridine synthase activity
RAHAQ_RS03400	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
RAHAQ_RS03405	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
RAHAQ_RS03410	COG4942	peptidase
RAHAQ_RS03410	COG1388	LysM domain
RAHAQ_RS03415	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
RAHAQ_RS03420	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
RAHAQ_RS03430	COG2951	lytic endotransglycosylase activity
RAHAQ_RS03440	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
RAHAQ_RS03445	COG2137	regulation of response to DNA damage stimulus
RAHAQ_RS03450	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
RAHAQ_RS03455	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
RAHAQ_RS03480	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RAHAQ_RS03485	COG1238	metal cluster binding
RAHAQ_RS03490	COG2918	glutathione biosynthetic process
RAHAQ_RS03495	COG1854	S-ribosylhomocysteine lyase activity
RAHAQ_RS03500	COG4536	flavin adenine dinucleotide binding
RAHAQ_RS03505	COG4137	Cytochrome C assembly protein
RAHAQ_RS03510	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
RAHAQ_RS03520	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
RAHAQ_RS03530	COG0335	large ribosomal subunit rRNA binding
RAHAQ_RS03645	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
RAHAQ_RS03650	COG0287	Prephenate dehydrogenase
RAHAQ_RS03650	COG1605	Chorismate mutase
RAHAQ_RS03655	COG0077	Prephenate dehydratase
RAHAQ_RS03655	COG1605	Chorismate mutase
RAHAQ_RS03660	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
RAHAQ_RS03665	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
RAHAQ_RS03670	COG0564	pseudouridine synthase activity
RAHAQ_RS03675	COG1496	oxidoreductase activity
RAHAQ_RS03680	COG0542	response to heat
RAHAQ_RS03710	COG0477	Major facilitator Superfamily
RAHAQ_RS03715	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
RAHAQ_RS03720	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RAHAQ_RS03720	COG0045	succinate-CoA ligase (ADP-forming) activity
RAHAQ_RS03720	COG1042	CoA-binding domain protein
RAHAQ_RS03725	COG3148	PFAM DTW domain containing protein
RAHAQ_RS03730	COG3118	belongs to the thioredoxin family
RAHAQ_RS03735	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
RAHAQ_RS03740	COG2814	Major facilitator Superfamily
RAHAQ_RS03745	COG1566	PFAM secretion protein HlyD family protein
RAHAQ_RS03755	COG1846	Transcriptional regulator
RAHAQ_RS03765	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
RAHAQ_RS03770	COG2814	Major facilitator Superfamily
RAHAQ_RS03780	COG2113	Glycine betaine
RAHAQ_RS03790	COG4176	ABC-type proline glycine betaine transport system permease component
RAHAQ_RS03795	COG4175	Glycine betaine
RAHAQ_RS03810	COG3493	citrate carrier protein
RAHAQ_RS03815	COG0791	NLP P60 protein
RAHAQ_RS03820	COG0667	Aldo Keto reductase
RAHAQ_RS03825	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
RAHAQ_RS03840	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
RAHAQ_RS03845	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
RAHAQ_RS03855	COG4575	ribosome binding
RAHAQ_RS03880	COG1105	Belongs to the carbohydrate kinase PfkB family
RAHAQ_RS03890	COG0354	folic acid binding
RAHAQ_RS03905	COG0716	FMN binding
RAHAQ_RS03910	COG4974	Belongs to the 'phage' integrase family
RAHAQ_RS03915	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
RAHAQ_RS03920	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
RAHAQ_RS03925	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
RAHAQ_RS03930	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
RAHAQ_RS03940	COG3423	Transcriptional regulator
RAHAQ_RS03950	COG0583	DNA-binding transcription factor activity
RAHAQ_RS03955	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
RAHAQ_RS03960	COG3366	ferrous iron transmembrane transporter activity
RAHAQ_RS03965	COG0700	Nucleoside recognition
RAHAQ_RS03970	COG1473	amidohydrolase
RAHAQ_RS03975	COG1522	sequence-specific DNA binding
RAHAQ_RS04000	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
RAHAQ_RS04005	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RAHAQ_RS04010	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RAHAQ_RS04025	COG2852	Protein conserved in bacteria
RAHAQ_RS04030	COG3423	Transcriptional regulator
RAHAQ_RS04055	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RAHAQ_RS04055	COG1263	PTS System
RAHAQ_RS04060	COG2188	Transcriptional regulator
RAHAQ_RS04065	COG4178	(ABC) transporter
RAHAQ_RS04080	COG0583	DNA-binding transcription factor activity
RAHAQ_RS04085	COG2814	Major facilitator Superfamily
RAHAQ_RS04090	COG0583	DNA-binding transcription factor activity
RAHAQ_RS04100	COG1447	Phosphotransferase system cellobiose-specific component IIA
RAHAQ_RS04105	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
RAHAQ_RS04110	COG2723	6-phospho-beta-galactosidase activity
RAHAQ_RS04120	COG2186	Transcriptional regulator
RAHAQ_RS04130	COG1609	Transcriptional regulator
RAHAQ_RS04150	COG0667	Aldo Keto reductase
RAHAQ_RS04165	COG0494	nUDIX hydrolase
RAHAQ_RS04175	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
RAHAQ_RS04180	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
RAHAQ_RS04190	COG4795	General secretion pathway protein
RAHAQ_RS04215	COG0860	N-Acetylmuramoyl-L-alanine amidase
RAHAQ_RS04230	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
RAHAQ_RS04235	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
RAHAQ_RS04240	COG2166	iron-sulfur cluster assembly
RAHAQ_RS04245	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
RAHAQ_RS04255	COG0583	DNA-binding transcription factor activity
RAHAQ_RS04260	COG2363	Small membrane protein
RAHAQ_RS04265	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
RAHAQ_RS04270	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
RAHAQ_RS04275	COG1611	Belongs to the LOG family
RAHAQ_RS04280	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
RAHAQ_RS04280	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
RAHAQ_RS04290	COG2814	Major facilitator Superfamily
RAHAQ_RS04295	COG3098	single-species biofilm formation
RAHAQ_RS04320	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
RAHAQ_RS04330	COG0052	Belongs to the universal ribosomal protein uS2 family
RAHAQ_RS04335	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
RAHAQ_RS04345	COG0233	cytoplasmic translational termination
RAHAQ_RS04350	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
RAHAQ_RS04360	COG0575	Belongs to the CDS family
RAHAQ_RS04365	COG0750	zinc metalloprotease
RAHAQ_RS04370	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
RAHAQ_RS04375	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
RAHAQ_RS04380	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
RAHAQ_RS04385	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
RAHAQ_RS04395	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
RAHAQ_RS04400	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
RAHAQ_RS04410	COG0825	malonyl-CoA metabolic process
RAHAQ_RS04415	COG1982	Orn Lys Arg decarboxylase major
RAHAQ_RS04420	COG0346	lactoylglutathione lyase activity
RAHAQ_RS04425	COG0037	tRNA processing
RAHAQ_RS04435	COG4568	rho-dependent transcription termination
RAHAQ_RS04455	COG3015	lipoprotein NlpE involved in copper resistance
RAHAQ_RS04460	COG0442	prolyl-tRNA aminoacylation
RAHAQ_RS04465	COG1720	tRNA m6t6A37 methyltransferase activity
RAHAQ_RS04475	COG1464	Belongs to the NlpA lipoprotein family
RAHAQ_RS04480	COG2011	ABC-type metal ion transport system permease component
RAHAQ_RS04485	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
RAHAQ_RS04490	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
RAHAQ_RS04535	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
RAHAQ_RS04550	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
RAHAQ_RS04555	COG0463	Glycosyl transferase, family 2
RAHAQ_RS04580	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
RAHAQ_RS04590	COG1028	Short-chain dehydrogenase reductase Sdr
RAHAQ_RS04595	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
RAHAQ_RS04610	COG0583	DNA-binding transcription factor activity
RAHAQ_RS04615	COG2814	Major facilitator Superfamily
RAHAQ_RS04620	COG3021	interspecies interaction between organisms
RAHAQ_RS04625	COG0741	lytic transglycosylase activity
RAHAQ_RS04625	COG1388	LysM domain
RAHAQ_RS04630	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RAHAQ_RS04635	COG2226	methyltransferase
RAHAQ_RS04640	COG0328	RNA-DNA hybrid ribonuclease activity
RAHAQ_RS04645	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
RAHAQ_RS04650	COG2957	Belongs to the agmatine deiminase family
RAHAQ_RS04655	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
RAHAQ_RS04665	COG1953	Uracil, thiamine, allantoin
RAHAQ_RS04720	COG0765	amino acid transport
RAHAQ_RS04725	COG1126	abc transporter atp-binding protein
RAHAQ_RS04730	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
RAHAQ_RS04745	COG2351	hydroxyisourate hydrolase activity
RAHAQ_RS04750	COG0504	CTP synthase activity
RAHAQ_RS04765	COG0436	Aminotransferase
RAHAQ_RS04770	COG0235	Class ii aldolase
RAHAQ_RS04775	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
RAHAQ_RS04780	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
RAHAQ_RS04785	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
RAHAQ_RS04790	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
RAHAQ_RS04795	COG4807	Protein conserved in bacteria
RAHAQ_RS04810	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
RAHAQ_RS04815	COG0121	glutamine amidotransferase
RAHAQ_RS04820	COG3034	peptidoglycan biosynthetic process
RAHAQ_RS04825	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
RAHAQ_RS04830	COG2195	Cleaves the N-terminal amino acid of tripeptides
RAHAQ_RS04835	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
RAHAQ_RS04840	COG1073	alpha beta
RAHAQ_RS04860	COG0583	DNA-binding transcription factor activity
RAHAQ_RS04935	COG0667	Aldo Keto reductase
RAHAQ_RS04940	COG0656	L-ascorbic acid biosynthetic process
RAHAQ_RS04960	COG1473	amidohydrolase
RAHAQ_RS04965	COG2171	N-acyltransferase activity
RAHAQ_RS04970	COG0840	transmembrane signaling receptor activity
RAHAQ_RS04980	COG1879	ABC-type sugar transport system periplasmic component
RAHAQ_RS04985	COG1129	ABC transporter
RAHAQ_RS04990	COG1172	Belongs to the binding-protein-dependent transport system permease family
RAHAQ_RS04995	COG1737	Transcriptional regulator
RAHAQ_RS05000	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RAHAQ_RS05010	COG1902	pentaerythritol trinitrate reductase activity
RAHAQ_RS05015	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
RAHAQ_RS05020	COG1074	ATP-dependent DNA helicase activity
RAHAQ_RS05025	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
RAHAQ_RS05050	COG0583	DNA-binding transcription factor activity
RAHAQ_RS05085	COG1278	Cold shock
RAHAQ_RS05100	COG4948	Mandelate Racemase Muconate Lactonizing
RAHAQ_RS05110	COG2223	nitrite transmembrane transporter activity
RAHAQ_RS05115	COG0596	Alpha beta hydrolase
RAHAQ_RS05140	COG2205	protein histidine kinase activity
RAHAQ_RS05145	COG3170	Tfp pilus assembly protein FimV
RAHAQ_RS05150	COG2204	response regulator
RAHAQ_RS05155	COG0347	Belongs to the P(II) protein family
RAHAQ_RS05175	COG1017	nitric oxide dioxygenase activity
RAHAQ_RS05175	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
RAHAQ_RS05180	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
RAHAQ_RS05185	COG2814	Major facilitator Superfamily
RAHAQ_RS05190	COG3711	transcriptional antiterminator
RAHAQ_RS05195	COG3683	transport system, periplasmic component
RAHAQ_RS05200	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
RAHAQ_RS05205	COG0483	inositol monophosphate 1-phosphatase activity
RAHAQ_RS05210	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
RAHAQ_RS05215	COG1959	2 iron, 2 sulfur cluster binding
RAHAQ_RS05220	COG1104	cysteine desulfurase activity
RAHAQ_RS05225	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
RAHAQ_RS05235	COG0105	UTP biosynthetic process
RAHAQ_RS05240	COG0820	rRNA (adenine-C2-)-methyltransferase activity
RAHAQ_RS05255	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
RAHAQ_RS05260	COG0124	histidyl-tRNA synthetase
RAHAQ_RS05265	COG2976	Protein conserved in bacteria
RAHAQ_RS05270	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
RAHAQ_RS05275	COG1160	GTP binding
RAHAQ_RS05300	COG2271	Major facilitator Superfamily
RAHAQ_RS05310	COG1570	exodeoxyribonuclease VII activity
RAHAQ_RS05315	COG0517	IMP dehydrogenase activity
RAHAQ_RS05315	COG0516	GMP reductase activity
RAHAQ_RS05320	COG0519	Catalyzes the synthesis of GMP from XMP
RAHAQ_RS05320	COG0518	GMP synthase (glutamine-hydrolyzing) activity
RAHAQ_RS05330	COG2249	NAD(P)H dehydrogenase (quinone) activity
RAHAQ_RS05335	COG0583	DNA-binding transcription factor activity
RAHAQ_RS05350	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
RAHAQ_RS05355	COG0351	phosphomethylpyrimidine kinase
RAHAQ_RS05365	COG1802	Transcriptional regulator
RAHAQ_RS05375	COG2211	Major facilitator Superfamily
RAHAQ_RS05385	COG1605	Chorismate mutase
RAHAQ_RS05390	COG2271	Major facilitator Superfamily
RAHAQ_RS05395	COG1063	alcohol dehydrogenase
RAHAQ_RS05400	COG4948	Mandelate Racemase Muconate Lactonizing
RAHAQ_RS05410	COG2211	Major facilitator Superfamily
RAHAQ_RS05415	COG1597	lipid kinase activity
RAHAQ_RS05420	COG0826	peptidase U32
RAHAQ_RS05425	COG3422	double-strand break repair
RAHAQ_RS05430	COG0745	RESPONSE REGULATOR receiver
RAHAQ_RS05435	COG2205	protein histidine kinase activity
RAHAQ_RS05440	COG2814	Major facilitator Superfamily
RAHAQ_RS05450	COG0667	Aldo Keto reductase
RAHAQ_RS05455	COG0443	Heat shock 70 kDa protein
RAHAQ_RS05460	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
RAHAQ_RS05465	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
RAHAQ_RS05475	COG1957	nucleoside hydrolase
RAHAQ_RS05485	COG0408	coproporphyrinogen oxidase activity
RAHAQ_RS05495	COG0456	acetyltransferase
RAHAQ_RS05500	COG3111	PFAM Bacterial OB fold (BOF) protein
RAHAQ_RS05515	COG2837	iron assimilation
RAHAQ_RS05525	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
RAHAQ_RS05530	COG4208	sulfate ABC transporter
RAHAQ_RS05545	COG0745	RESPONSE REGULATOR receiver
RAHAQ_RS05550	COG2205	protein histidine kinase activity
RAHAQ_RS05560	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
RAHAQ_RS05580	COG3115	cell septum assembly
RAHAQ_RS05585	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
RAHAQ_RS05590	COG3530	Putative quorum-sensing-regulated virulence factor
RAHAQ_RS05595	COG0385	Bile acid
RAHAQ_RS05600	COG0583	DNA-binding transcription factor activity
RAHAQ_RS05615	COG0531	amino acid
RAHAQ_RS05620	COG4303	Ethanolamine ammonia lyase large subunit
RAHAQ_RS05625	COG4302	ethanolamine ammonia-lyase activity
RAHAQ_RS05655	COG2116	formate transmembrane transporter activity
RAHAQ_RS05670	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
RAHAQ_RS05675	COG1914	H( )-stimulated, divalent metal cation uptake system
RAHAQ_RS05685	COG0667	Aldo Keto reductase
RAHAQ_RS05690	COG3961	Belongs to the TPP enzyme family
RAHAQ_RS05695	COG0583	DNA-binding transcription factor activity
RAHAQ_RS05705	COG1794	racemase activity, acting on amino acids and derivatives
RAHAQ_RS05720	COG3279	Response regulator of the LytR AlgR family
RAHAQ_RS05725	COG3275	phosphorelay sensor kinase activity
RAHAQ_RS05730	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RAHAQ_RS05735	COG0436	Aminotransferase
RAHAQ_RS05745	COG1881	PFAM PEBP family protein
RAHAQ_RS05755	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
RAHAQ_RS05765	COG1462	curli production assembly transport component CsgG
RAHAQ_RS05800	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
RAHAQ_RS05805	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
RAHAQ_RS05810	COG3383	formate dehydrogenase (NAD+) activity
RAHAQ_RS05815	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
RAHAQ_RS05820	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
RAHAQ_RS05830	COG3260	NADH ubiquinone oxidoreductase 20
RAHAQ_RS05835	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RAHAQ_RS05840	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
RAHAQ_RS05840	COG3261	NADH dehydrogenase
RAHAQ_RS05845	COG0650	Formate hydrogenlyase subunit 4
RAHAQ_RS05850	COG0651	ATP synthesis coupled electron transport
RAHAQ_RS05855	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
RAHAQ_RS05865	COG0375	protein maturation
RAHAQ_RS05870	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
RAHAQ_RS05875	COG0298	carbon dioxide binding
RAHAQ_RS05880	COG0409	Hydrogenase expression formation protein
RAHAQ_RS05885	COG0309	Hydrogenase expression formation protein (HypE)
RAHAQ_RS05910	COG0583	DNA-binding transcription factor activity
RAHAQ_RS05920	COG4641	Protein conserved in bacteria
RAHAQ_RS05920	COG0438	transferase activity, transferring glycosyl groups
RAHAQ_RS05930	COG0625	glutathione transferase activity
RAHAQ_RS05935	COG1609	Transcriptional regulator
RAHAQ_RS05945	COG0673	inositol 2-dehydrogenase activity
RAHAQ_RS05960	COG2211	Major facilitator Superfamily
RAHAQ_RS05970	COG1464	Belongs to the NlpA lipoprotein family
RAHAQ_RS06005	COG4974	Belongs to the 'phage' integrase family
RAHAQ_RS06020	COG3311	Transcriptional regulator
RAHAQ_RS06025	COG0582	viral genome integration into host DNA
RAHAQ_RS06035	COG2116	formate transmembrane transporter activity
RAHAQ_RS06045	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
RAHAQ_RS06050	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
RAHAQ_RS06055	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
RAHAQ_RS06060	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
RAHAQ_RS06065	COG1138	Cytochrome C-type biogenesis protein
RAHAQ_RS06070	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
RAHAQ_RS06075	COG3088	subunit of a heme lyase
RAHAQ_RS06075	COG4235	cytochrome complex assembly
RAHAQ_RS06080	COG3088	subunit of a heme lyase
RAHAQ_RS06080	COG4235	cytochrome complex assembly
RAHAQ_RS06090	COG2067	long-chain fatty acid transport protein
RAHAQ_RS06095	COG3691	Protein conserved in bacteria
RAHAQ_RS06100	COG0183	Belongs to the thiolase family
RAHAQ_RS06105	COG1250	3-hydroxyacyl-CoA dehydrogenase
RAHAQ_RS06105	COG1024	Enoyl-CoA hydratase
RAHAQ_RS06110	COG2062	phosphohistidine phosphatase, SixA
RAHAQ_RS06120	COG2890	protein-(glutamine-N5) methyltransferase activity
RAHAQ_RS06125	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
RAHAQ_RS06135	COG0730	response to heat
RAHAQ_RS06140	COG3101	peptidyl-lysine hydroxylation
RAHAQ_RS06150	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
RAHAQ_RS06150	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RAHAQ_RS06155	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
RAHAQ_RS06170	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
RAHAQ_RS06190	COG0697	spore germination
RAHAQ_RS06195	COG2207	Transcriptional regulator
RAHAQ_RS06200	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
RAHAQ_RS06205	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
RAHAQ_RS06215	COG0586	Pfam SNARE associated Golgi protein
RAHAQ_RS06220	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
RAHAQ_RS06225	COG0285	dihydrofolate synthase activity
RAHAQ_RS06230	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
RAHAQ_RS06235	COG1286	toxin biosynthetic process
RAHAQ_RS06240	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
RAHAQ_RS06245	COG0163	prenyltransferase activity
RAHAQ_RS06250	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RAHAQ_RS06255	COG4215	(ABC) transporter
RAHAQ_RS06265	COG4598	ABC transporter
RAHAQ_RS06270	COG2195	Cleaves the N-terminal amino acid of tripeptides
RAHAQ_RS06275	COG0747	negative chemotaxis
RAHAQ_RS06280	COG1090	epimerase
RAHAQ_RS06285	COG0625	glutathione transferase activity
RAHAQ_RS06290	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
RAHAQ_RS06295	COG1609	Transcriptional regulator
RAHAQ_RS06300	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
RAHAQ_RS06310	COG3037	sugar-specific permease SgaT UlaA
RAHAQ_RS06315	COG3959	Transketolase, thiamine diphosphate binding domain
RAHAQ_RS06320	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
RAHAQ_RS06325	COG0280	phosphate acetyltransferase
RAHAQ_RS06325	COG0857	belongs to the CobB CobQ family
RAHAQ_RS06330	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
RAHAQ_RS06340	COG3092	negative regulation of chromosome organization
RAHAQ_RS06345	COG3013	Belongs to the UPF0304 family
RAHAQ_RS06350	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RAHAQ_RS06355	COG0490	domain, Protein
RAHAQ_RS06355	COG0471	metal ion transport
RAHAQ_RS06360	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
RAHAQ_RS06365	COG0436	Aminotransferase
RAHAQ_RS06370	COG0583	DNA-binding transcription factor activity
RAHAQ_RS06375	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RAHAQ_RS06385	COG0649	NAD binding
RAHAQ_RS06385	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RAHAQ_RS06395	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
RAHAQ_RS06400	COG1034	ATP synthesis coupled electron transport
RAHAQ_RS06405	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
RAHAQ_RS06410	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RAHAQ_RS06415	COG0839	Belongs to the complex I subunit 6 family
RAHAQ_RS06420	COG0713	ATP synthesis coupled electron transport
RAHAQ_RS06425	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
RAHAQ_RS06430	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RAHAQ_RS06435	COG1007	ATP synthesis coupled electron transport
RAHAQ_RS06445	COG4575	ribosome binding
RAHAQ_RS06450	COG1169	isochorismate synthase
RAHAQ_RS06455	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
RAHAQ_RS06460	COG0596	Alpha beta hydrolase
RAHAQ_RS06465	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
RAHAQ_RS06470	COG1441	menaquinone biosynthetic process
RAHAQ_RS06495	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
RAHAQ_RS06510	COG3468	outer membrane autotransporter barrel domain protein
RAHAQ_RS06515	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
RAHAQ_RS06525	COG2205	protein histidine kinase activity
RAHAQ_RS06525	COG0784	Response regulator, receiver
RAHAQ_RS06530	COG2197	response regulator
RAHAQ_RS06535	COG2198	Histidine kinase
RAHAQ_RS06535	COG0642	Histidine kinase
RAHAQ_RS06550	COG1132	(ABC) transporter
RAHAQ_RS06570	COG2207	Transcriptional regulator
RAHAQ_RS06580	COG0768	penicillin binding
RAHAQ_RS06590	COG0435	Glutathione S-transferase
RAHAQ_RS06600	COG3082	Protein of unknown function (DUF1414)
RAHAQ_RS06605	COG3081	Nucleoid-associated protein
RAHAQ_RS06610	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
RAHAQ_RS06615	COG1061	Type III restriction enzyme res subunit
RAHAQ_RS06620	COG1187	pseudouridine synthase activity
RAHAQ_RS06625	COG2814	Major facilitator Superfamily
RAHAQ_RS06635	COG1609	Transcriptional regulator
RAHAQ_RS06640	COG1028	Short-chain dehydrogenase reductase Sdr
RAHAQ_RS06645	COG1028	Short-chain dehydrogenase reductase Sdr
RAHAQ_RS06670	COG4172	Belongs to the ABC transporter superfamily
RAHAQ_RS06675	COG4239	(ABC) transporter, permease
RAHAQ_RS06680	COG4174	ABC transporter (Permease)
RAHAQ_RS06685	COG4166	transmembrane transport
RAHAQ_RS06690	COG2200	EAL domain
RAHAQ_RS06695	COG0791	NLP P60 protein
RAHAQ_RS06700	COG0671	phosphoesterase, PA-phosphatase related
RAHAQ_RS06705	COG0523	cobalamin synthesis protein
RAHAQ_RS06715	COG2186	Transcriptional regulator
RAHAQ_RS06720	COG0246	Mannitol dehydrogenase
RAHAQ_RS06725	COG3385	transposase activity
RAHAQ_RS06730	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
RAHAQ_RS06750	COG1105	Belongs to the carbohydrate kinase PfkB family
RAHAQ_RS06755	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
RAHAQ_RS06755	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
RAHAQ_RS06755	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
RAHAQ_RS06760	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
RAHAQ_RS06765	COG2855	membrane
RAHAQ_RS06770	COG0583	DNA-binding transcription factor activity
RAHAQ_RS06775	COG0833	amino acid
RAHAQ_RS06780	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RAHAQ_RS06790	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
RAHAQ_RS06805	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
RAHAQ_RS06810	COG2824	Alkylphosphonate utilization operon protein PhnA
RAHAQ_RS06825	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
RAHAQ_RS06840	COG1126	abc transporter atp-binding protein
RAHAQ_RS06845	COG0765	amino acid transport
RAHAQ_RS06850	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RAHAQ_RS06855	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
RAHAQ_RS06890	COG0438	transferase activity, transferring glycosyl groups
RAHAQ_RS06915	COG0783	Belongs to the Dps family
RAHAQ_RS06930	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
RAHAQ_RS06940	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
RAHAQ_RS06945	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
RAHAQ_RS06950	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
RAHAQ_RS06980	COG0583	DNA-binding transcription factor activity
RAHAQ_RS06985	COG0066	3-isopropylmalate dehydratase activity
RAHAQ_RS06990	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
RAHAQ_RS07000	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
RAHAQ_RS07010	COG1012	belongs to the aldehyde dehydrogenase family
RAHAQ_RS07015	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
RAHAQ_RS07020	COG2153	protein acetylation
RAHAQ_RS07040	COG5654	RES domain protein
RAHAQ_RS07045	COG5642	Protein of unknown function (DUF2384)
RAHAQ_RS07055	COG0488	(ABC) transporter
RAHAQ_RS07065	COG0303	'Molybdopterin
RAHAQ_RS07070	COG1349	DNA-binding transcription factor activity
RAHAQ_RS07095	COG4172	Belongs to the ABC transporter superfamily
RAHAQ_RS07100	COG0747	negative chemotaxis
RAHAQ_RS07105	COG0601	transmembrane transport
RAHAQ_RS07110	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RAHAQ_RS07125	COG0583	DNA-binding transcription factor activity
RAHAQ_RS07130	COG0477	Major facilitator Superfamily
RAHAQ_RS07135	COG0302	gtp cyclohydrolase
RAHAQ_RS07140	COG2311	Membrane
RAHAQ_RS07145	COG1609	Transcriptional regulator
RAHAQ_RS07165	COG2949	membrane
RAHAQ_RS07170	COG0281	malic enzyme
RAHAQ_RS07175	COG0295	cytidine deaminase activity
RAHAQ_RS07180	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RAHAQ_RS07185	COG4160	amino acid transport
RAHAQ_RS07190	COG4215	(ABC) transporter
RAHAQ_RS07195	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RAHAQ_RS07200	COG1126	abc transporter atp-binding protein
RAHAQ_RS07210	COG0393	Putative heavy-metal-binding
RAHAQ_RS07215	COG3023	N-Acetylmuramoyl-L-alanine amidase
RAHAQ_RS07220	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RAHAQ_RS07225	COG0702	epimerase
RAHAQ_RS07230	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
RAHAQ_RS07235	COG0028	Belongs to the TPP enzyme family
RAHAQ_RS07240	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
RAHAQ_RS07245	COG1151	hydroxylamine reductase activity
RAHAQ_RS07250	COG2431	L-lysine efflux transmembrane transporter activity
RAHAQ_RS07255	COG3593	DNA synthesis involved in DNA repair
RAHAQ_RS07260	COG2990	Protein conserved in bacteria
RAHAQ_RS07265	COG1278	Cold shock
RAHAQ_RS07270	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
RAHAQ_RS07275	COG0542	response to heat
RAHAQ_RS07280	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
RAHAQ_RS07285	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
RAHAQ_RS07290	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
RAHAQ_RS07295	COG4988	ABC transporter
RAHAQ_RS07300	COG0492	ferredoxin-NADP+ reductase activity
RAHAQ_RS07310	COG1674	ftsk spoiiie
RAHAQ_RS07310	COG3107	peptidoglycan biosynthetic process
RAHAQ_RS07315	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
RAHAQ_RS07320	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
RAHAQ_RS07325	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
RAHAQ_RS07330	COG0243	molybdopterin cofactor binding
RAHAQ_RS07335	COG0243	molybdopterin cofactor binding
RAHAQ_RS07340	COG0437	4 iron, 4 sulfur cluster binding
RAHAQ_RS07345	COG3302	dmso reductase anchor subunit
RAHAQ_RS07350	COG3381	protein complex oligomerization
RAHAQ_RS07360	COG2814	Major facilitator Superfamily
RAHAQ_RS07365	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
RAHAQ_RS07370	COG4974	Belongs to the 'phage' integrase family
RAHAQ_RS07430	COG4695	Portal protein
RAHAQ_RS07515	COG5301	cellulose 1,4-beta-cellobiosidase activity
RAHAQ_RS07565	COG1882	Formate acetyltransferase
RAHAQ_RS07570	COG2116	formate transmembrane transporter activity
RAHAQ_RS07575	COG1944	ATP diphosphatase activity
RAHAQ_RS07590	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
RAHAQ_RS07595	COG0539	negative regulation of cytoplasmic translation
RAHAQ_RS07600	COG0776	regulation of translation
RAHAQ_RS07605	COG2333	competence protein COMEC
RAHAQ_RS07605	COG0658	competence protein
RAHAQ_RS07615	COG1663	tetraacyldisaccharide 4'-kinase activity
RAHAQ_RS07625	COG1278	Cold shock
RAHAQ_RS07630	COG3214	Protein conserved in bacteria
RAHAQ_RS07635	COG2835	tetraacyldisaccharide 4'-kinase activity
RAHAQ_RS07640	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
RAHAQ_RS07645	COG3173	Aminoglycoside phosphotransferase
RAHAQ_RS07650	COG1434	Gram-negative-bacterium-type cell wall biogenesis
RAHAQ_RS07655	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
RAHAQ_RS07660	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
RAHAQ_RS07670	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
RAHAQ_RS07675	COG2989	Protein conserved in bacteria
RAHAQ_RS07680	COG3108	Peptidase M15
RAHAQ_RS07685	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RAHAQ_RS07690	COG1448	Aminotransferase
RAHAQ_RS07700	COG0017	Asparaginyl-tRNA synthetase
RAHAQ_RS07705	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
RAHAQ_RS07715	COG0308	aminopeptidase N
RAHAQ_RS07720	COG1116	anion transmembrane transporter activity
RAHAQ_RS07725	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RAHAQ_RS07730	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RAHAQ_RS07735	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RAHAQ_RS07740	COG0431	NADPH-dependent FMN reductase
RAHAQ_RS07755	COG0633	Ferredoxin
RAHAQ_RS07755	COG3217	Mosc domain protein beta barrel domain protein
RAHAQ_RS07760	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
RAHAQ_RS07760	COG0116	Belongs to the methyltransferase superfamily
RAHAQ_RS07765	COG0488	(ABC) transporter
RAHAQ_RS07770	COG2995	paraquat-inducible protein a
RAHAQ_RS07775	COG3008	intermembrane lipid transfer
RAHAQ_RS07775	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
RAHAQ_RS07780	COG3009	Protein conserved in bacteria
RAHAQ_RS07785	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
RAHAQ_RS07790	COG1067	ATP-dependent peptidase activity
RAHAQ_RS07805	COG5404	Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division
RAHAQ_RS07810	COG3070	regulator of competence-specific genes
RAHAQ_RS07815	COG1289	transmembrane transporter activity
RAHAQ_RS07820	COG3304	Inner membrane component domain
RAHAQ_RS07825	COG0210	DNA helicase
RAHAQ_RS07830	COG1803	Methylglyoxal synthase
RAHAQ_RS07840	COG1832	CoA-binding protein
RAHAQ_RS07850	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
RAHAQ_RS07855	COG1254	Belongs to the acylphosphatase family
RAHAQ_RS07860	COG2920	part of a sulfur-relay system
RAHAQ_RS07865	COG0670	Belongs to the BI1 family
RAHAQ_RS07900	COG3842	ATPase activity
RAHAQ_RS07905	COG0840	transmembrane signaling receptor activity
RAHAQ_RS07915	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
RAHAQ_RS07930	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RAHAQ_RS07935	COG1396	sequence-specific DNA binding
RAHAQ_RS07935	COG1917	Cupin 2, conserved barrel domain protein
RAHAQ_RS07940	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
RAHAQ_RS07945	COG0174	glutamine synthetase
RAHAQ_RS07950	COG0531	amino acid
RAHAQ_RS07955	COG2925	Exonuclease
RAHAQ_RS07960	COG1289	transmembrane transporter activity
RAHAQ_RS07970	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
RAHAQ_RS07980	COG2182	Extracellular solute-binding protein
RAHAQ_RS07985	COG1175	transmembrane transport
RAHAQ_RS07990	COG3833	ABC-type maltose transport systems, permease component
RAHAQ_RS07995	COG3867	Arabinogalactan endo-beta-1,4-galactanase
RAHAQ_RS08000	COG1874	Beta-galactosidase
RAHAQ_RS08005	COG1263	PTS System
RAHAQ_RS08005	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RAHAQ_RS08015	COG1609	Transcriptional regulator
RAHAQ_RS08030	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
RAHAQ_RS08050	COG3052	prosthetic group binding
RAHAQ_RS08055	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
RAHAQ_RS08060	COG0179	Fumarylacetoacetate (FAA) hydrolase
RAHAQ_RS08065	COG3493	citrate carrier protein
RAHAQ_RS08075	COG4565	transcriptional regulatory protein
RAHAQ_RS08080	COG0534	Mate efflux family protein
RAHAQ_RS08085	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
RAHAQ_RS08090	COG0625	glutathione transferase activity
RAHAQ_RS08095	COG0477	Major facilitator Superfamily
RAHAQ_RS08105	COG0583	DNA-binding transcription factor activity
RAHAQ_RS08150	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RAHAQ_RS08160	COG1621	beta-fructofuranosidase activity
RAHAQ_RS08165	COG2814	Major facilitator Superfamily
RAHAQ_RS08220	COG0604	alcohol dehydrogenase
RAHAQ_RS08225	COG0583	DNA-binding transcription factor activity
RAHAQ_RS08240	COG0667	Aldo Keto reductase
RAHAQ_RS08260	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
RAHAQ_RS08265	COG0386	Belongs to the glutathione peroxidase family
RAHAQ_RS08275	COG1178	ABC-type Fe3 transport system permease component
RAHAQ_RS08280	COG1840	ABC-type Fe3 transport system, periplasmic component
RAHAQ_RS08300	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RAHAQ_RS08305	COG4608	Belongs to the ABC transporter superfamily
RAHAQ_RS08310	COG0444	Belongs to the ABC transporter superfamily
RAHAQ_RS08315	COG0601	transmembrane transport
RAHAQ_RS08320	COG0747	negative chemotaxis
RAHAQ_RS08335	COG0436	Aminotransferase
RAHAQ_RS08340	COG0504	CTP synthase activity
RAHAQ_RS08345	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RAHAQ_RS08350	COG0006	proline dipeptidase activity
RAHAQ_RS08360	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
RAHAQ_RS08370	COG0765	amino acid transport
RAHAQ_RS08375	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RAHAQ_RS08380	COG1802	Transcriptional regulator
RAHAQ_RS08400	COG2879	small protein
RAHAQ_RS08405	COG1966	Carbon starvation protein
RAHAQ_RS08410	COG3678	ATP-independent chaperone mediated protein folding
RAHAQ_RS08415	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RAHAQ_RS08420	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
RAHAQ_RS08420	COG0517	IMP dehydrogenase activity
RAHAQ_RS08425	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
RAHAQ_RS08435	COG1172	Belongs to the binding-protein-dependent transport system permease family
RAHAQ_RS08440	COG1129	ABC transporter
RAHAQ_RS08455	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
RAHAQ_RS08465	COG1012	belongs to the aldehyde dehydrogenase family
RAHAQ_RS08470	COG3724	N-succinylarginine dihydrolase activity
RAHAQ_RS08495	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
RAHAQ_RS08500	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
RAHAQ_RS08505	COG3381	protein complex oligomerization
RAHAQ_RS08515	COG2999	glutathione oxidoreductase activity
RAHAQ_RS08520	COG0477	Major facilitator Superfamily
RAHAQ_RS08525	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RAHAQ_RS08535	COG0673	inositol 2-dehydrogenase activity
RAHAQ_RS08545	COG0018	arginyl-trna synthetase
RAHAQ_RS08550	COG3102	Protein conserved in bacteria
RAHAQ_RS08555	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
RAHAQ_RS08560	COG3142	Participates in the control of copper homeostasis
RAHAQ_RS08575	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
RAHAQ_RS08580	COG2226	methyltransferase
RAHAQ_RS08585	COG3788	relative of glutathione S-transferase, MAPEG superfamily
RAHAQ_RS08590	COG1801	Protein of unknown function DUF72
RAHAQ_RS08595	COG1335	isochorismatase
RAHAQ_RS08600	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
RAHAQ_RS08605	COG0494	nUDIX hydrolase
RAHAQ_RS08610	COG0217	transcriptional regulatory protein
RAHAQ_RS08620	COG0632	four-way junction helicase activity
RAHAQ_RS08625	COG2255	four-way junction helicase activity
RAHAQ_RS08630	COG3385	transposase activity
RAHAQ_RS08635	COG1472	Belongs to the glycosyl hydrolase 3 family
RAHAQ_RS08640	COG2211	Major facilitator Superfamily
RAHAQ_RS08645	COG0583	DNA-binding transcription factor activity
RAHAQ_RS08650	COG1028	Short-chain dehydrogenase reductase Sdr
RAHAQ_RS08690	COG4221	oxidoreductase activity
RAHAQ_RS08710	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RAHAQ_RS08730	COG0583	DNA-binding transcription factor activity
RAHAQ_RS08735	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RAHAQ_RS08745	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RAHAQ_RS08745	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RAHAQ_RS08755	COG0572	uridine kinase
RAHAQ_RS08760	COG0717	Belongs to the dCTP deaminase family
RAHAQ_RS08765	COG2982	Protein involved in outer membrane biogenesis
RAHAQ_RS08770	COG1253	flavin adenine dinucleotide binding
RAHAQ_RS08775	COG1210	Utp--glucose-1-phosphate uridylyltransferase
RAHAQ_RS08780	COG1088	dTDP-glucose 4,6-dehydratase activity
RAHAQ_RS08805	COG1442	glycosyl transferase family 8
RAHAQ_RS08830	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
RAHAQ_RS08835	COG0140	phosphoribosyl-ATP diphosphatase activity
RAHAQ_RS08835	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
RAHAQ_RS08845	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
RAHAQ_RS08855	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
RAHAQ_RS08855	COG0131	Imidazoleglycerol-phosphate dehydratase
RAHAQ_RS08860	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
RAHAQ_RS08865	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
RAHAQ_RS08870	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
RAHAQ_RS08875	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RAHAQ_RS08900	COG2198	Histidine kinase
RAHAQ_RS08900	COG0643	Histidine kinase
RAHAQ_RS08905	COG0835	chemotaxis
RAHAQ_RS08910	COG0582	viral genome integration into host DNA
RAHAQ_RS08920	COG5532	Uncharacterized conserved protein (DUF2303)
RAHAQ_RS08940	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
RAHAQ_RS08945	COG4197	protein conserved in bacteria, prophage-related
RAHAQ_RS08955	COG1802	Transcriptional regulator
RAHAQ_RS08955	COG4626	Terminase
RAHAQ_RS08980	COG1403	HNH endonuclease
RAHAQ_RS09005	COG3772	lysozyme
RAHAQ_RS09040	COG4626	Terminase
RAHAQ_RS09040	COG1802	Transcriptional regulator
RAHAQ_RS09045	COG4695	Portal protein
RAHAQ_RS09050	COG0740	serine-type endopeptidase activity
RAHAQ_RS09145	COG0477	Major facilitator Superfamily
RAHAQ_RS09160	COG0840	transmembrane signaling receptor activity
RAHAQ_RS09165	COG0840	transmembrane signaling receptor activity
RAHAQ_RS09170	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
RAHAQ_RS09180	COG0745	RESPONSE REGULATOR receiver
RAHAQ_RS09185	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
RAHAQ_RS09190	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
RAHAQ_RS09195	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
RAHAQ_RS09210	COG3418	PFAM FlgN family protein
RAHAQ_RS09215	COG2747	anti-sigma28 factor FlgM
RAHAQ_RS09225	COG1815	bacterial-type flagellum-dependent cell motility
RAHAQ_RS09230	COG1558	bacterial-type flagellum-dependent cell motility
RAHAQ_RS09235	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
RAHAQ_RS09240	COG1749	Flagellar hook protein flgE
RAHAQ_RS09270	COG1256	bacterial-type flagellum assembly
RAHAQ_RS09280	COG1346	cytolysis
RAHAQ_RS09285	COG1380	Effector of murein hydrolase LrgA
RAHAQ_RS09290	COG1126	abc transporter atp-binding protein
RAHAQ_RS09295	COG0765	amino acid transport
RAHAQ_RS09310	COG1473	amidohydrolase
RAHAQ_RS09315	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RAHAQ_RS09320	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RAHAQ_RS09325	COG1309	transcriptional regulator
RAHAQ_RS09330	COG0604	alcohol dehydrogenase
RAHAQ_RS09335	COG0835	chemotaxis
RAHAQ_RS09335	COG0784	Response regulator, receiver
RAHAQ_RS09355	COG1234	tRNA 3'-trailer cleavage
RAHAQ_RS09365	COG0583	DNA-binding transcription factor activity
RAHAQ_RS09370	COG2079	MmgE PrpD family protein
RAHAQ_RS09385	COG0477	Major facilitator Superfamily
RAHAQ_RS09390	COG1566	PFAM secretion protein HlyD family protein
RAHAQ_RS09405	COG2207	Transcriptional regulator
RAHAQ_RS09410	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RAHAQ_RS09425	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RAHAQ_RS09445	COG0251	oxidation-reduction process
RAHAQ_RS09450	COG0402	S-adenosylhomocysteine deaminase activity
RAHAQ_RS09460	COG0583	DNA-binding transcription factor activity
RAHAQ_RS09485	COG3122	Protein conserved in bacteria
RAHAQ_RS09490	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RAHAQ_RS09495	COG2222	sugar isomerase
RAHAQ_RS09500	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RAHAQ_RS09505	COG2188	Transcriptional regulator
RAHAQ_RS09515	COG1902	pentaerythritol trinitrate reductase activity
RAHAQ_RS09555	COG1028	Short-chain dehydrogenase reductase Sdr
RAHAQ_RS09570	COG3228	Belongs to the MtfA family
RAHAQ_RS09575	COG2200	EAL domain
RAHAQ_RS09580	COG0596	Alpha beta hydrolase
RAHAQ_RS09585	COG3479	Phenolic acid decarboxylase
RAHAQ_RS09595	COG2194	sulfuric ester hydrolase activity
RAHAQ_RS09600	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
RAHAQ_RS09620	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
RAHAQ_RS09630	COG1064	alcohol dehydrogenase
RAHAQ_RS09640	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RAHAQ_RS09660	COG0840	transmembrane signaling receptor activity
RAHAQ_RS09675	COG2211	Major facilitator Superfamily
RAHAQ_RS09690	COG1804	L-carnitine dehydratase bile acid-inducible protein F
RAHAQ_RS09695	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
RAHAQ_RS09710	COG2733	membrane
RAHAQ_RS09720	COG2271	Major facilitator Superfamily
RAHAQ_RS09725	COG4615	Cyclic peptide transporter
RAHAQ_RS09735	COG3264	Mechanosensitive ion channel
RAHAQ_RS09735	COG1196	nuclear chromosome segregation
RAHAQ_RS09740	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RAHAQ_RS09745	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RAHAQ_RS09765	COG0598	Magnesium transport protein CorA
RAHAQ_RS09770	COG0300	oxidoreductase activity
RAHAQ_RS09775	COG2207	Transcriptional regulator
RAHAQ_RS09785	COG2814	Major facilitator Superfamily
RAHAQ_RS09790	COG1566	PFAM secretion protein HlyD family protein
RAHAQ_RS09805	COG1376	ErfK ybiS ycfS ynhG family protein
RAHAQ_RS09825	COG4774	siderophore transport
RAHAQ_RS09830	COG4122	O-methyltransferase activity
RAHAQ_RS09855	COG0640	Transcriptional regulator
RAHAQ_RS09860	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
RAHAQ_RS09870	COG0655	NAD(P)H dehydrogenase (quinone) activity
RAHAQ_RS09920	COG1108	ABC-type Mn2 Zn2 transport systems permease components
RAHAQ_RS09930	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
RAHAQ_RS09935	COG0739	heme binding
RAHAQ_RS09940	COG1560	Kdo2-lipid A biosynthetic process
RAHAQ_RS09955	COG3486	L-lysine 6-monooxygenase (NADPH) activity
RAHAQ_RS09960	COG0076	glutamate decarboxylase activity
RAHAQ_RS09965	COG0469	pyruvate kinase activity
RAHAQ_RS09970	COG1737	Transcriptional regulator
RAHAQ_RS09975	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
RAHAQ_RS09980	COG0800	Aldolase
RAHAQ_RS09985	COG0251	oxidation-reduction process
RAHAQ_RS09990	COG1199	ATP-dependent helicase activity
RAHAQ_RS10000	COG3065	identical protein binding
RAHAQ_RS10005	COG0318	PFAM AMP-dependent synthetase and ligase
RAHAQ_RS10010	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
RAHAQ_RS10015	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
RAHAQ_RS10020	COG2894	cell division
RAHAQ_RS10025	COG0850	regulation of cytokinetic process
RAHAQ_RS10030	COG3100	YcgL domain-containing protein
RAHAQ_RS10035	COG2951	lytic endotransglycosylase activity
RAHAQ_RS10040	COG0179	Fumarylacetoacetate (FAA) hydrolase
RAHAQ_RS10045	COG2983	Belongs to the UPF0260 family
RAHAQ_RS10055	COG0628	permease
RAHAQ_RS10070	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
RAHAQ_RS10075	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
RAHAQ_RS10080	COG2186	Transcriptional regulator
RAHAQ_RS10085	COG2719	SpoVR family
RAHAQ_RS10100	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RAHAQ_RS10120	COG3137	Salt-induced outer membrane protein
RAHAQ_RS10140	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
RAHAQ_RS10185	COG2718	Belongs to the UPF0229 family
RAHAQ_RS10190	COG2766	serine protein kinase
RAHAQ_RS10195	COG3713	MltA-interacting MipA family protein
RAHAQ_RS10200	COG0656	L-ascorbic acid biosynthetic process
RAHAQ_RS10205	COG0676	glucose-6-phosphate 1-epimerase activity
RAHAQ_RS10215	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
RAHAQ_RS10220	COG3139	Protein of unknown function (DUF1315)
RAHAQ_RS10225	COG1335	isochorismatase
RAHAQ_RS10230	COG0252	asparaginase activity
RAHAQ_RS10235	COG0616	signal peptide processing
RAHAQ_RS10240	COG0778	Nitroreductase
RAHAQ_RS10245	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
RAHAQ_RS10255	COG0494	nUDIX hydrolase
RAHAQ_RS10260	COG0708	Exodeoxyribonuclease III
RAHAQ_RS10270	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
RAHAQ_RS10275	COG4948	Mandelate Racemase Muconate Lactonizing
RAHAQ_RS10280	COG4166	transmembrane transport
RAHAQ_RS10285	COG2814	Major facilitator Superfamily
RAHAQ_RS10290	COG0583	DNA-binding transcription factor activity
RAHAQ_RS10305	COG0037	tRNA processing
RAHAQ_RS10335	COG1028	Short-chain dehydrogenase reductase Sdr
RAHAQ_RS10340	COG2186	Transcriptional regulator
RAHAQ_RS10345	COG4977	sequence-specific DNA binding
RAHAQ_RS10355	COG3250	beta-galactosidase activity
RAHAQ_RS10360	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
RAHAQ_RS10360	COG1013	pyruvate-flavodoxin oxidoreductase activity
RAHAQ_RS10360	COG0674	pyruvate-flavodoxin oxidoreductase activity
RAHAQ_RS10360	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RAHAQ_RS10375	COG3842	ATPase activity
RAHAQ_RS10380	COG1653	transport
RAHAQ_RS10385	COG1175	transmembrane transport
RAHAQ_RS10390	COG0395	ABC-type sugar transport system, permease component
RAHAQ_RS10400	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
RAHAQ_RS10405	COG2911	Protein conserved in bacteria
RAHAQ_RS10415	COG3784	Protein of unknown function (DUF1318)
RAHAQ_RS10425	COG1643	Atp-dependent helicase
RAHAQ_RS10430	COG3591	Belongs to the peptidase S1B family
RAHAQ_RS10440	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
RAHAQ_RS10445	COG2205	protein histidine kinase activity
RAHAQ_RS10450	COG0745	RESPONSE REGULATOR receiver
RAHAQ_RS10475	COG4932	domain protein
RAHAQ_RS10480	COG2197	response regulator
RAHAQ_RS10485	COG3850	Histidine kinase
RAHAQ_RS10490	COG2223	nitrite transmembrane transporter activity
RAHAQ_RS10495	COG3385	transposase activity
RAHAQ_RS10525	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
RAHAQ_RS10535	COG4659	FMN binding
RAHAQ_RS10545	COG4656	Part of a membrane complex involved in electron transport
RAHAQ_RS10550	COG2878	Part of a membrane complex involved in electron transport
RAHAQ_RS10555	COG4657	Part of a membrane complex involved in electron transport
RAHAQ_RS10565	COG3069	C4-dicarboxylate transmembrane transporter activity
RAHAQ_RS10570	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RAHAQ_RS10590	COG1175	transmembrane transport
RAHAQ_RS10595	COG0395	ABC-type sugar transport system, permease component
RAHAQ_RS10600	COG3842	ATPase activity
RAHAQ_RS10605	COG2814	Major facilitator Superfamily
RAHAQ_RS10610	COG0583	DNA-binding transcription factor activity
RAHAQ_RS10615	COG1940	carbohydrate kinase activity
RAHAQ_RS10630	COG0477	Major facilitator Superfamily
RAHAQ_RS10635	COG4149	molybdate abc transporter
RAHAQ_RS10640	COG1840	ABC-type Fe3 transport system, periplasmic component
RAHAQ_RS10660	COG1879	ABC-type sugar transport system periplasmic component
RAHAQ_RS10665	COG1129	ABC transporter
RAHAQ_RS10670	COG1172	Belongs to the binding-protein-dependent transport system permease family
RAHAQ_RS10680	COG1312	Catalyzes the dehydration of D-mannonate
RAHAQ_RS10685	COG2186	Transcriptional regulator
RAHAQ_RS10690	COG2194	sulfuric ester hydrolase activity
RAHAQ_RS10715	COG1215	transferase activity, transferring glycosyl groups
RAHAQ_RS10720	COG1215	transferase activity, transferring glycosyl groups
RAHAQ_RS10725	COG3118	belongs to the thioredoxin family
RAHAQ_RS10725	COG0457	Tetratricopeptide repeat
RAHAQ_RS10735	COG1228	amidohydrolase
RAHAQ_RS10745	COG0402	S-adenosylhomocysteine deaminase activity
RAHAQ_RS10770	COG2986	histidine ammonia-lyase
RAHAQ_RS10775	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
RAHAQ_RS10780	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
RAHAQ_RS10795	COG1028	Short-chain dehydrogenase reductase Sdr
RAHAQ_RS10815	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RAHAQ_RS10830	COG0165	Argininosuccinate lyase
RAHAQ_RS10835	COG0765	amino acid transport
RAHAQ_RS10860	COG2079	MmgE PrpD family protein
RAHAQ_RS10865	COG0673	inositol 2-dehydrogenase activity
RAHAQ_RS10870	COG0385	Bile acid
RAHAQ_RS10875	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
RAHAQ_RS10880	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
RAHAQ_RS10885	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RAHAQ_RS10885	COG1263	PTS System
RAHAQ_RS10890	COG1609	Transcriptional regulator
RAHAQ_RS10900	COG2084	Dehydrogenase
RAHAQ_RS10920	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
RAHAQ_RS10925	COG4977	sequence-specific DNA binding
RAHAQ_RS10945	COG3097	Belongs to the UPF0267 family
RAHAQ_RS10960	COG2818	Glycosylase
RAHAQ_RS10975	COG0114	fumarate hydratase activity
RAHAQ_RS10980	COG1482	cell wall glycoprotein biosynthetic process
RAHAQ_RS10985	COG5339	Protein conserved in bacteria
RAHAQ_RS10990	COG4619	ABC transporter
RAHAQ_RS10995	COG0390	transport system, permease component
RAHAQ_RS11000	COG2186	Transcriptional regulator
RAHAQ_RS11010	COG1178	ABC-type Fe3 transport system permease component
RAHAQ_RS11015	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
RAHAQ_RS11020	COG3842	ATPase activity
RAHAQ_RS11030	COG1529	Aldehyde oxidase and xanthine dehydrogenase
RAHAQ_RS11045	COG0402	S-adenosylhomocysteine deaminase activity
RAHAQ_RS11050	COG1940	carbohydrate kinase activity
RAHAQ_RS11055	COG2182	Extracellular solute-binding protein
RAHAQ_RS11070	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RAHAQ_RS11075	COG3842	ATPase activity
RAHAQ_RS11080	COG0667	Aldo Keto reductase
RAHAQ_RS11085	COG4221	oxidoreductase activity
RAHAQ_RS11090	COG2252	PERMEase
RAHAQ_RS11100	COG1742	UPF0060 membrane protein
RAHAQ_RS11130	COG0583	DNA-binding transcription factor activity
RAHAQ_RS11135	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RAHAQ_RS11165	COG0243	molybdopterin cofactor binding
RAHAQ_RS11170	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
RAHAQ_RS11175	COG0583	DNA-binding transcription factor activity
RAHAQ_RS11180	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
RAHAQ_RS11190	COG1477	protein flavinylation
RAHAQ_RS11195	COG2840	Smr protein MutS2
RAHAQ_RS11205	COG1215	transferase activity, transferring glycosyl groups
RAHAQ_RS11215	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RAHAQ_RS11220	COG0589	response to stress
RAHAQ_RS11225	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
RAHAQ_RS11230	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
RAHAQ_RS11250	COG0601	transmembrane transport
RAHAQ_RS11255	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RAHAQ_RS11260	COG0444	Belongs to the ABC transporter superfamily
RAHAQ_RS11265	COG4608	Belongs to the ABC transporter superfamily
RAHAQ_RS11275	COG0493	'glutamate synthase
RAHAQ_RS11275	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
RAHAQ_RS11305	COG0659	secondary active sulfate transmembrane transporter activity
RAHAQ_RS11310	COG2877	3-deoxy-8-phosphooctulonate synthase activity
RAHAQ_RS11325	COG2890	protein-(glutamine-N5) methyltransferase activity
RAHAQ_RS11330	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
RAHAQ_RS11335	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
RAHAQ_RS11350	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
RAHAQ_RS11360	COG0193	aminoacyl-tRNA hydrolase activity
RAHAQ_RS11375	COG0330	HflC and HflK could
RAHAQ_RS11385	COG0659	secondary active sulfate transmembrane transporter activity
RAHAQ_RS11390	COG0012	GTP binding
RAHAQ_RS11410	COG5002	protein histidine kinase activity
RAHAQ_RS11415	COG0745	RESPONSE REGULATOR receiver
RAHAQ_RS11420	COG3459	Glycosyltransferase 36 associated
RAHAQ_RS11425	COG0778	Nitroreductase
RAHAQ_RS11430	COG5001	Diguanylate cyclase
RAHAQ_RS11430	COG3300	MHYT domain
RAHAQ_RS11445	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RAHAQ_RS11460	COG0765	amino acid transport
RAHAQ_RS11465	COG4215	(ABC) transporter
RAHAQ_RS11480	COG0583	DNA-binding transcription factor activity
RAHAQ_RS11495	COG3385	transposase activity
RAHAQ_RS11510	COG1802	Transcriptional regulator
RAHAQ_RS11520	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RAHAQ_RS11525	COG0601	transmembrane transport
RAHAQ_RS11565	COG0583	DNA-binding transcription factor activity
RAHAQ_RS11570	COG2207	Transcriptional regulator
RAHAQ_RS11575	COG1028	Short-chain dehydrogenase reductase Sdr
RAHAQ_RS11590	COG1522	sequence-specific DNA binding
RAHAQ_RS11605	COG0745	RESPONSE REGULATOR receiver
RAHAQ_RS11635	COG0640	Transcriptional regulator
RAHAQ_RS11640	COG0477	Major facilitator Superfamily
RAHAQ_RS11655	COG2837	iron assimilation
RAHAQ_RS11685	COG0800	Aldolase
RAHAQ_RS11690	COG0129	dihydroxy-acid dehydratase activity
RAHAQ_RS11700	COG3265	gluconokinase activity
RAHAQ_RS11720	COG0697	spore germination
RAHAQ_RS11725	COG1064	alcohol dehydrogenase
RAHAQ_RS11740	COG1250	3-hydroxyacyl-CoA dehydrogenase
RAHAQ_RS11750	COG2986	histidine ammonia-lyase
RAHAQ_RS11765	COG1174	glycine betaine transport
RAHAQ_RS11775	COG2207	Transcriptional regulator
RAHAQ_RS11785	COG0583	DNA-binding transcription factor activity
RAHAQ_RS11790	COG1741	Belongs to the pirin family
RAHAQ_RS11795	COG3423	Transcriptional regulator
RAHAQ_RS11800	COG0456	acetyltransferase
RAHAQ_RS11810	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RAHAQ_RS11815	COG1126	abc transporter atp-binding protein
RAHAQ_RS11820	COG0765	amino acid transport
RAHAQ_RS11825	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RAHAQ_RS11835	COG0765	amino acid transport
RAHAQ_RS11840	COG0765	amino acid transport
RAHAQ_RS11850	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RAHAQ_RS11855	COG1648	precorrin-2 dehydrogenase activity
RAHAQ_RS11855	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
RAHAQ_RS11860	COG0243	molybdopterin cofactor binding
RAHAQ_RS11865	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
RAHAQ_RS11865	COG2146	nitrite reductase [NAD(P)H] activity
RAHAQ_RS11870	COG1116	anion transmembrane transporter activity
RAHAQ_RS11880	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RAHAQ_RS11885	COG3707	response regulator
RAHAQ_RS11915	COG2723	6-phospho-beta-galactosidase activity
RAHAQ_RS11920	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RAHAQ_RS11920	COG1263	PTS System
RAHAQ_RS11925	COG1609	Transcriptional regulator
RAHAQ_RS11930	COG5001	Diguanylate cyclase
RAHAQ_RS11930	COG3300	MHYT domain
RAHAQ_RS11940	COG0444	Belongs to the ABC transporter superfamily
RAHAQ_RS11945	COG4608	Belongs to the ABC transporter superfamily
RAHAQ_RS11950	COG0747	negative chemotaxis
RAHAQ_RS11960	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RAHAQ_RS11970	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RAHAQ_RS11985	COG0477	Major facilitator Superfamily
RAHAQ_RS11990	COG1737	Transcriptional regulator
RAHAQ_RS11995	COG0371	Dehydrogenase
RAHAQ_RS12015	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RAHAQ_RS12020	COG0601	transmembrane transport
RAHAQ_RS12030	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
RAHAQ_RS12035	COG2188	Transcriptional regulator
RAHAQ_RS12040	COG0583	DNA-binding transcription factor activity
RAHAQ_RS12055	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RAHAQ_RS12060	COG0601	transmembrane transport
RAHAQ_RS12065	COG0747	negative chemotaxis
RAHAQ_RS12075	COG4948	Mandelate Racemase Muconate Lactonizing
RAHAQ_RS12090	COG1132	(ABC) transporter
RAHAQ_RS12105	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
RAHAQ_RS12115	COG2181	nitrate reductase activity
RAHAQ_RS12120	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
RAHAQ_RS12125	COG1140	nitrate reductase beta subunit
RAHAQ_RS12130	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
RAHAQ_RS12140	COG0038	chloride channel
RAHAQ_RS12145	COG3549	Plasmid maintenance system killer
RAHAQ_RS12150	COG3093	addiction module antidote protein HigA
RAHAQ_RS12155	COG4166	transmembrane transport
RAHAQ_RS12160	COG4608	Belongs to the ABC transporter superfamily
RAHAQ_RS12165	COG0444	Belongs to the ABC transporter superfamily
RAHAQ_RS12170	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RAHAQ_RS12175	COG0601	transmembrane transport
RAHAQ_RS12185	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
RAHAQ_RS12190	COG4572	Cation transport regulator
RAHAQ_RS12195	COG0387	Pfam Sodium calcium exchanger
RAHAQ_RS12200	COG1702	phosphate starvation-inducible protein PhoH
RAHAQ_RS12205	COG0860	N-Acetylmuramoyl-L-alanine amidase
RAHAQ_RS12215	COG2822	iron ion transport
RAHAQ_RS12220	COG0672	)-iron permease
RAHAQ_RS12230	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
RAHAQ_RS12230	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
RAHAQ_RS12230	COG0506	proline dehydrogenase activity
RAHAQ_RS12235	COG1126	abc transporter atp-binding protein
RAHAQ_RS12240	COG0765	amino acid transport
RAHAQ_RS12245	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RAHAQ_RS12260	COG1191	sigma factor activity
RAHAQ_RS12335	COG3781	membrane
RAHAQ_RS12340	COG1677	Flagellar hook-basal body complex protein FliE
RAHAQ_RS12345	COG1766	The M ring may be actively involved in energy transduction
RAHAQ_RS12365	COG2882	bacterial-type flagellum organization
RAHAQ_RS12370	COG3144	bacterial-type flagellum assembly
RAHAQ_RS12395	COG1338	Plays a role in the flagellum-specific transport system
RAHAQ_RS12400	COG1987	bacterial-type flagellum assembly
RAHAQ_RS12410	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
RAHAQ_RS12420	COG1177	transmembrane transport
RAHAQ_RS12425	COG1176	ABC-type spermidine putrescine transport system, permease component I
RAHAQ_RS12430	COG3842	ATPase activity
RAHAQ_RS12435	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
RAHAQ_RS12445	COG0189	ligase activity
RAHAQ_RS12465	COG0569	domain protein
RAHAQ_RS12465	COG2985	domain, Protein
RAHAQ_RS12620	COG4695	Portal protein
RAHAQ_RS12725	COG0671	phosphoesterase, PA-phosphatase related
RAHAQ_RS12730	COG1686	Belongs to the peptidase S11 family
RAHAQ_RS12735	COG3136	membrane protein required for alginate biosynthesis
RAHAQ_RS12760	COG2133	pyrroloquinoline quinone binding
RAHAQ_RS12770	COG2211	Major facilitator Superfamily
RAHAQ_RS12775	COG1501	Belongs to the glycosyl hydrolase 31 family
RAHAQ_RS12780	COG2207	Transcriptional regulator
RAHAQ_RS12780	COG1609	Transcriptional regulator
RAHAQ_RS12785	COG4214	carbohydrate transport
RAHAQ_RS12795	COG4213	ABC transporter substrate-binding protein
RAHAQ_RS12800	COG2115	Belongs to the xylose isomerase family
RAHAQ_RS12805	COG1070	Carbohydrate kinase
RAHAQ_RS12810	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
RAHAQ_RS12815	COG1830	Aldolase
RAHAQ_RS12825	COG1172	Belongs to the binding-protein-dependent transport system permease family
RAHAQ_RS12835	COG1129	ABC transporter
RAHAQ_RS12840	COG2390	Transcriptional regulator
RAHAQ_RS12845	COG1070	Carbohydrate kinase
RAHAQ_RS12860	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
RAHAQ_RS12865	COG1882	Formate acetyltransferase
RAHAQ_RS12870	COG1349	DNA-binding transcription factor activity
RAHAQ_RS12875	COG0235	Class ii aldolase
RAHAQ_RS12885	COG0023	Translation Initiation Factor
RAHAQ_RS12900	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
RAHAQ_RS12905	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
RAHAQ_RS12910	COG0671	phosphoesterase, PA-phosphatase related
RAHAQ_RS12925	COG0583	DNA-binding transcription factor activity
RAHAQ_RS12940	COG0616	signal peptide processing
RAHAQ_RS12945	COG1028	Short-chain dehydrogenase reductase Sdr
RAHAQ_RS12960	COG0406	alpha-ribazole phosphatase activity
RAHAQ_RS12975	COG1187	pseudouridine synthase activity
RAHAQ_RS12980	COG0009	L-threonylcarbamoyladenylate synthase
RAHAQ_RS12985	COG0613	PHP domain protein
RAHAQ_RS13000	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
RAHAQ_RS13010	COG0133	tryptophan synthase activity
RAHAQ_RS13015	COG0159	tryptophan synthase activity
RAHAQ_RS13025	COG3047	cAMP biosynthetic process
RAHAQ_RS13030	COG0727	PFAM Uncharacterised protein family (UPF0153)
RAHAQ_RS13040	COG3385	transposase activity
RAHAQ_RS13045	COG2917	probably involved in intracellular septation
RAHAQ_RS13050	COG1607	acyl-coa hydrolase
RAHAQ_RS13060	COG2350	Protein conserved in bacteria
RAHAQ_RS13070	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
RAHAQ_RS13075	COG3099	Belongs to the UPF0263 family
RAHAQ_RS13085	COG0444	Belongs to the ABC transporter superfamily
RAHAQ_RS13090	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RAHAQ_RS13110	COG2095	MarC family integral membrane protein
RAHAQ_RS13115	COG1454	alcohol dehydrogenase
RAHAQ_RS13115	COG1012	belongs to the aldehyde dehydrogenase family
RAHAQ_RS13120	COG1435	thymidine kinase activity
RAHAQ_RS13140	COG0745	RESPONSE REGULATOR receiver
RAHAQ_RS13145	COG1752	Esterase of the alpha-beta hydrolase superfamily
RAHAQ_RS13155	COG0788	formyltetrahydrofolate deformylase activity
RAHAQ_RS13165	COG4172	Belongs to the ABC transporter superfamily
RAHAQ_RS13175	COG1940	carbohydrate kinase activity
RAHAQ_RS13180	COG0747	negative chemotaxis
RAHAQ_RS13185	COG0601	transmembrane transport
RAHAQ_RS13190	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RAHAQ_RS13205	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
RAHAQ_RS13215	COG3384	dioxygenase
RAHAQ_RS13225	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
RAHAQ_RS13235	COG0438	transferase activity, transferring glycosyl groups
RAHAQ_RS13240	COG0583	DNA-binding transcription factor activity
RAHAQ_RS13245	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
RAHAQ_RS13250	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
RAHAQ_RS13255	COG2828	Protein conserved in bacteria
RAHAQ_RS13265	COG4608	Belongs to the ABC transporter superfamily
RAHAQ_RS13270	COG0444	Belongs to the ABC transporter superfamily
RAHAQ_RS13275	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RAHAQ_RS13280	COG0601	transmembrane transport
RAHAQ_RS13285	COG0747	negative chemotaxis
RAHAQ_RS13290	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
RAHAQ_RS13310	COG0366	Alpha amylase catalytic
RAHAQ_RS13315	COG0366	Alpha amylase catalytic
RAHAQ_RS13320	COG3842	ATPase activity
RAHAQ_RS13340	COG1653	transport
RAHAQ_RS13345	COG0583	DNA-binding transcription factor activity
RAHAQ_RS13355	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
RAHAQ_RS13365	COG4948	Mandelate Racemase Muconate Lactonizing
RAHAQ_RS13370	COG0800	Aldolase
RAHAQ_RS13375	COG3734	2-keto-3-deoxy-galactonokinase
RAHAQ_RS13380	COG2186	Transcriptional regulator
RAHAQ_RS13395	COG3547	Transposase (IS116 IS110 IS902 family)
RAHAQ_RS13440	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RAHAQ_RS13445	COG0697	spore germination
RAHAQ_RS13450	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RAHAQ_RS13455	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
RAHAQ_RS13460	COG1984	allophanate hydrolase subunit 2
RAHAQ_RS13480	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
RAHAQ_RS13485	COG4221	oxidoreductase activity
RAHAQ_RS13490	COG0765	amino acid transport
RAHAQ_RS13495	COG0765	amino acid transport
RAHAQ_RS13505	COG2315	Protein conserved in bacteria
RAHAQ_RS13525	COG2011	ABC-type metal ion transport system permease component
RAHAQ_RS13550	COG0411	ABC transporter
RAHAQ_RS13560	COG0559	Belongs to the binding-protein-dependent transport system permease family
RAHAQ_RS13575	COG0840	transmembrane signaling receptor activity
RAHAQ_RS13580	COG0113	porphobilinogen synthase activity
RAHAQ_RS13620	COG3768	UPF0283 membrane protein
RAHAQ_RS13625	COG3106	COG3106 Predicted ATPase
RAHAQ_RS13635	COG1983	PspC domain protein
RAHAQ_RS13645	COG1842	Phage shock protein A
RAHAQ_RS13650	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
RAHAQ_RS13670	COG4171	peptide transport system, permease
RAHAQ_RS13675	COG4172	Belongs to the ABC transporter superfamily
RAHAQ_RS13680	COG4172	Belongs to the ABC transporter superfamily
RAHAQ_RS13685	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
RAHAQ_RS13685	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
RAHAQ_RS13690	COG3104	oligopeptide transport
RAHAQ_RS13700	COG5001	Diguanylate cyclase
RAHAQ_RS13700	COG5002	protein histidine kinase activity
RAHAQ_RS13700	COG3447	MASE1 domain protein
RAHAQ_RS13720	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RAHAQ_RS13725	COG0625	glutathione transferase activity
RAHAQ_RS13735	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
RAHAQ_RS13740	COG0259	pyridoxamine-phosphate oxidase activity
RAHAQ_RS13745	COG3895	Periplasmic Protein
RAHAQ_RS13750	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
RAHAQ_RS13760	COG1846	Transcriptional regulator
RAHAQ_RS13770	COG1566	PFAM secretion protein HlyD family protein
RAHAQ_RS13775	COG1289	transmembrane transporter activity
RAHAQ_RS13780	COG4989	oxidoreductase activity
RAHAQ_RS13785	COG3313	Fe-S protein
RAHAQ_RS13790	COG1902	pentaerythritol trinitrate reductase activity
RAHAQ_RS13800	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
RAHAQ_RS13805	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
RAHAQ_RS13810	COG0791	NLP P60 protein
RAHAQ_RS13820	COG0583	DNA-binding transcription factor activity
RAHAQ_RS13825	COG2814	Major facilitator Superfamily
RAHAQ_RS13830	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
RAHAQ_RS13835	COG0307	riboflavin synthase, alpha
RAHAQ_RS13840	COG0534	Mate efflux family protein
RAHAQ_RS13865	COG1376	ErfK ybiS ycfS ynhG family protein
RAHAQ_RS13865	COG1388	LysM domain
RAHAQ_RS13870	COG2166	iron-sulfur cluster assembly
RAHAQ_RS13875	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
RAHAQ_RS13880	COG0719	Fe-S assembly protein
RAHAQ_RS13885	COG0396	ATPase activity
RAHAQ_RS13890	COG0719	Fe-S assembly protein
RAHAQ_RS13895	COG0316	Belongs to the HesB IscA family
RAHAQ_RS13905	COG2050	protein possibly involved in aromatic compounds catabolism
RAHAQ_RS13910	COG0277	FAD linked oxidase domain protein
RAHAQ_RS13910	COG0247	lactate metabolic process
RAHAQ_RS13915	COG0628	permease
RAHAQ_RS13920	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
RAHAQ_RS13920	COG0574	Belongs to the PEP-utilizing enzyme family
RAHAQ_RS13935	COG3720	iron ion transport
RAHAQ_RS13940	COG4558	Periplasmic binding protein
RAHAQ_RS13945	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RAHAQ_RS13950	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
RAHAQ_RS13965	COG0095	Lipoate-protein ligase
RAHAQ_RS13970	COG0791	NLP P60 protein
RAHAQ_RS13975	COG2076	Multidrug Resistance protein
RAHAQ_RS13980	COG2076	Multidrug Resistance protein
RAHAQ_RS13985	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
RAHAQ_RS13990	COG0726	polysaccharide deacetylase
RAHAQ_RS13995	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
RAHAQ_RS13995	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RAHAQ_RS14000	COG1215	transferase activity, transferring glycosyl groups
RAHAQ_RS14005	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
RAHAQ_RS14015	COG0386	Belongs to the glutathione peroxidase family
RAHAQ_RS14020	COG4139	cobalamin transport
RAHAQ_RS14030	COG0776	regulation of translation
RAHAQ_RS14035	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RAHAQ_RS14035	COG0072	phenylalanine-tRNA ligase activity
RAHAQ_RS14045	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
RAHAQ_RS14060	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
RAHAQ_RS14075	COG3001	Fructosamine kinase
RAHAQ_RS14085	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RAHAQ_RS14095	COG1028	Short-chain dehydrogenase reductase Sdr
RAHAQ_RS14100	COG1988	membrane-bound metal-dependent
RAHAQ_RS14105	COG1823	symporter activity
RAHAQ_RS14115	COG2814	Major facilitator Superfamily
RAHAQ_RS14120	COG0501	Belongs to the peptidase M48B family
RAHAQ_RS14135	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
RAHAQ_RS14140	COG1956	GAF domain-containing protein
RAHAQ_RS14145	COG2995	paraquat-inducible protein a
RAHAQ_RS14150	COG3008	intermembrane lipid transfer
RAHAQ_RS14155	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
RAHAQ_RS14155	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
RAHAQ_RS14160	COG4251	negative regulation of phosphorylation
RAHAQ_RS14160	COG3706	GGDEF domain
RAHAQ_RS14160	COG5001	Diguanylate cyclase
RAHAQ_RS14160	COG2203	Gaf domain
RAHAQ_RS14190	COG1473	amidohydrolase
RAHAQ_RS14200	COG1064	alcohol dehydrogenase
RAHAQ_RS14205	COG0840	transmembrane signaling receptor activity
RAHAQ_RS14215	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
RAHAQ_RS14230	COG4695	Portal protein
RAHAQ_RS14235	COG2801	Transposase and inactivated derivatives
RAHAQ_RS14240	COG2963	transposase activity
RAHAQ_RS14245	COG4695	Portal protein
RAHAQ_RS14270	COG1276	copper resistance
RAHAQ_RS14275	COG2372	response to copper ion
RAHAQ_RS14280	COG1528	Iron-storage protein
RAHAQ_RS14295	COG1770	oligopeptidase
RAHAQ_RS14305	COG0513	Belongs to the DEAD box helicase family
RAHAQ_RS14310	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
RAHAQ_RS14315	COG3140	Belongs to the UPF0181 family
RAHAQ_RS14325	COG0494	nUDIX hydrolase
RAHAQ_RS14330	COG1760	l-serine dehydratase
RAHAQ_RS14335	COG2200	EAL domain
RAHAQ_RS14340	COG1253	flavin adenine dinucleotide binding
RAHAQ_RS14345	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
RAHAQ_RS14345	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RAHAQ_RS14350	COG3715	PTS system
RAHAQ_RS14355	COG3716	PTS system mannose fructose sorbose family IID component
RAHAQ_RS14360	COG4811	Protein of unknown function (DUF986)
RAHAQ_RS14365	COG1971	Probably functions as a manganese efflux pump
RAHAQ_RS14370	COG2226	methyltransferase
RAHAQ_RS14375	COG1496	oxidoreductase activity
RAHAQ_RS14410	COG3468	outer membrane autotransporter barrel domain protein
RAHAQ_RS14455	COG0538	isocitrate dehydrogenase activity
RAHAQ_RS14460	COG1187	pseudouridine synthase activity
RAHAQ_RS14475	COG2915	High frequency lysogenization protein hflD homolog
RAHAQ_RS14480	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
RAHAQ_RS14485	COG3385	transposase activity
RAHAQ_RS14495	COG0745	RESPONSE REGULATOR receiver
RAHAQ_RS14505	COG2850	peptidyl-arginine hydroxylation
RAHAQ_RS14515	COG3547	Transposase (IS116 IS110 IS902 family)
RAHAQ_RS14530	COG4591	ABC-type transport system involved in lipoprotein release permease component
RAHAQ_RS14540	COG4591	ABC-type transport system involved in lipoprotein release permease component
RAHAQ_RS14545	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
RAHAQ_RS14550	COG3134	Outer membrane lipoprotein
RAHAQ_RS14555	COG1252	NADH dehydrogenase
RAHAQ_RS14560	COG3150	esterase
RAHAQ_RS14575	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
RAHAQ_RS14585	COG0537	adenosine 5'-monophosphoramidase activity
RAHAQ_RS14595	COG1263	PTS System
RAHAQ_RS14595	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RAHAQ_RS14600	COG0084	hydrolase, TatD family'
RAHAQ_RS14605	COG0470	DNA polymerase III
RAHAQ_RS14610	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
RAHAQ_RS14615	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
RAHAQ_RS14620	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
RAHAQ_RS14625	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
RAHAQ_RS14630	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
RAHAQ_RS14640	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
RAHAQ_RS14645	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
RAHAQ_RS14650	COG0416	fatty acid biosynthetic process
RAHAQ_RS14655	COG0333	Belongs to the bacterial ribosomal protein bL32 family
RAHAQ_RS14660	COG1399	metal-binding, possibly nucleic acid-binding protein
RAHAQ_RS14665	COG0424	maF-like protein
RAHAQ_RS14670	COG0564	pseudouridine synthase activity
RAHAQ_RS14675	COG1530	ribonuclease E activity
RAHAQ_RS14685	COG0418	dihydroorotase activity
RAHAQ_RS14715	COG0628	permease
RAHAQ_RS14730	COG3038	cytochrome b561
RAHAQ_RS14735	COG2353	YceI-like domain
RAHAQ_RS14740	COG1054	Belongs to the UPF0176 family
RAHAQ_RS14745	COG1902	pentaerythritol trinitrate reductase activity
RAHAQ_RS14750	COG1560	Kdo2-lipid A biosynthetic process
RAHAQ_RS14760	COG2814	Major facilitator Superfamily
RAHAQ_RS14780	COG5645	(Lipo)protein
RAHAQ_RS14785	COG2943	transferase activity, transferring hexosyl groups
RAHAQ_RS14790	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
RAHAQ_RS14855	COG1349	DNA-binding transcription factor activity
RAHAQ_RS14860	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
RAHAQ_RS14885	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
RAHAQ_RS14890	COG0322	excinuclease ABC activity
RAHAQ_RS14895	COG2197	response regulator
RAHAQ_RS14910	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
RAHAQ_RS14930	COG1113	amino acid transport
RAHAQ_RS14945	COG1309	transcriptional regulator
RAHAQ_RS14950	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RAHAQ_RS14955	COG1335	isochorismatase
RAHAQ_RS14960	COG0251	oxidation-reduction process
RAHAQ_RS14965	COG2267	carboxylic ester hydrolase activity
RAHAQ_RS14970	COG0778	Nitroreductase
RAHAQ_RS14975	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RAHAQ_RS14980	COG2233	PERMEase
RAHAQ_RS14985	COG0747	negative chemotaxis
RAHAQ_RS14990	COG0601	transmembrane transport
RAHAQ_RS14995	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RAHAQ_RS15000	COG4172	Belongs to the ABC transporter superfamily
RAHAQ_RS15005	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RAHAQ_RS15020	COG1129	ABC transporter
RAHAQ_RS15025	COG1172	Belongs to the binding-protein-dependent transport system permease family
RAHAQ_RS15030	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
RAHAQ_RS15030	COG0456	acetyltransferase
RAHAQ_RS15050	COG0300	oxidoreductase activity
RAHAQ_RS15065	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
RAHAQ_RS15085	COG0697	spore germination
RAHAQ_RS15090	COG1174	glycine betaine transport
RAHAQ_RS15095	COG1125	glycine betaine transport
RAHAQ_RS15100	COG1174	glycine betaine transport
RAHAQ_RS15105	COG1732	Glycine betaine
RAHAQ_RS15110	COG2814	Major facilitator Superfamily
RAHAQ_RS15120	COG0583	DNA-binding transcription factor activity
RAHAQ_RS15130	COG1473	amidohydrolase
RAHAQ_RS15135	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
RAHAQ_RS15145	COG1309	transcriptional regulator
RAHAQ_RS15185	COG1181	Belongs to the D-alanine--D-alanine ligase family
RAHAQ_RS15195	COG1012	belongs to the aldehyde dehydrogenase family
RAHAQ_RS15200	COG2850	peptidyl-arginine hydroxylation
RAHAQ_RS15205	COG3639	organic phosphonate transmembrane transporter activity
RAHAQ_RS15225	COG0277	FAD linked oxidase domain protein
RAHAQ_RS15245	COG1686	Belongs to the peptidase S11 family
RAHAQ_RS15250	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
RAHAQ_RS15265	COG0513	Belongs to the DEAD box helicase family
RAHAQ_RS15275	COG0670	Belongs to the BI1 family
RAHAQ_RS15285	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
RAHAQ_RS15295	COG0521	Mo-molybdopterin cofactor biosynthetic process
RAHAQ_RS15300	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
RAHAQ_RS15315	COG4628	conserved protein (DUF2132)
RAHAQ_RS15320	COG0556	nucleotide-excision repair
RAHAQ_RS15340	COG2226	methyltransferase
RAHAQ_RS15350	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
RAHAQ_RS15365	COG0436	Aminotransferase
RAHAQ_RS15375	COG3700	Belongs to the class B bacterial acid phosphatase family
RAHAQ_RS15380	COG2130	NADP-dependent
RAHAQ_RS15390	COG1881	PFAM PEBP family protein
RAHAQ_RS15395	COG4677	pectinesterase activity
RAHAQ_RS15405	COG2706	6-phosphogluconolactonase activity
RAHAQ_RS15410	COG0561	phosphatase activity
RAHAQ_RS15415	COG3423	Transcriptional regulator
RAHAQ_RS15430	COG4149	molybdate abc transporter
RAHAQ_RS15435	COG0725	ABC transporter, periplasmic molybdate-binding protein
RAHAQ_RS15445	COG2005	Transcriptional regulator
RAHAQ_RS15445	COG3585	molybdate ion transport
RAHAQ_RS15450	COG1119	ATPase activity
RAHAQ_RS15465	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
RAHAQ_RS15470	COG1085	galactose-1-phosphate uridylyltransferase
RAHAQ_RS15475	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
RAHAQ_RS15480	COG2017	converts alpha-aldose to the beta-anomer
RAHAQ_RS15490	COG0588	phosphoglycerate mutase activity
RAHAQ_RS15510	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
RAHAQ_RS15530	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
RAHAQ_RS15555	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
RAHAQ_RS15560	COG2885	chlorophyll binding
RAHAQ_RS15565	COG0823	Involved in the tonB-independent uptake of proteins
RAHAQ_RS15570	COG3064	Membrane
RAHAQ_RS15575	COG0848	biopolymer transport protein
RAHAQ_RS15580	COG0811	peptide transport
RAHAQ_RS15585	COG0824	Thioesterase
RAHAQ_RS15590	COG3790	cyd operon protein YbgE
RAHAQ_RS15595	COG1294	oxidase, subunit
RAHAQ_RS15600	COG1271	oxidase subunit
RAHAQ_RS15605	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
RAHAQ_RS15615	COG0508	dehydrogenase complex catalyzes the overall conversion of
RAHAQ_RS15620	COG0567	Dehydrogenase, E1 component
RAHAQ_RS15625	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
RAHAQ_RS15635	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
RAHAQ_RS15640	COG2009	succinate dehydrogenase
RAHAQ_RS15645	COG0372	Belongs to the citrate synthase family
RAHAQ_RS15650	COG3468	outer membrane autotransporter barrel domain protein
RAHAQ_RS15660	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
RAHAQ_RS15665	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
RAHAQ_RS15670	COG1984	allophanate hydrolase subunit 2
RAHAQ_RS15675	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
RAHAQ_RS15685	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
RAHAQ_RS15690	COG5212	phosphodiesterase
RAHAQ_RS15695	COG0415	Belongs to the DNA photolyase family
RAHAQ_RS15700	COG3272	Protein of unknown function (DUF1722)
RAHAQ_RS15715	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
RAHAQ_RS15720	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
RAHAQ_RS15725	COG2205	protein histidine kinase activity
RAHAQ_RS15730	COG0745	RESPONSE REGULATOR receiver
RAHAQ_RS15735	COG1695	Transcriptional regulator
RAHAQ_RS15740	COG0033	Phosphoglucomutase
RAHAQ_RS15745	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
RAHAQ_RS15750	COG0596	Alpha beta hydrolase
RAHAQ_RS15765	COG0716	FMN binding
RAHAQ_RS15770	COG0735	belongs to the Fur family
RAHAQ_RS15785	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
RAHAQ_RS15790	COG1263	PTS System
RAHAQ_RS15790	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RAHAQ_RS15790	COG2190	(PTS) system
RAHAQ_RS15795	COG0363	glucosamine-6-phosphate deaminase activity
RAHAQ_RS15800	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
RAHAQ_RS15805	COG1940	carbohydrate kinase activity
RAHAQ_RS15805	COG1846	Transcriptional regulator
RAHAQ_RS15810	COG0647	UMP catabolic process
RAHAQ_RS15815	COG0367	asparagine synthase
RAHAQ_RS15850	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RAHAQ_RS15855	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
RAHAQ_RS15865	COG1702	phosphate starvation-inducible protein PhoH
RAHAQ_RS15870	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
RAHAQ_RS15875	COG4535	Mg2 and Co2 transporter CorC
RAHAQ_RS15880	COG0815	Transfers the fatty acyl group on membrane lipoproteins
RAHAQ_RS15890	COG0765	amino acid transport
RAHAQ_RS15895	COG0765	amino acid transport
RAHAQ_RS15900	COG1126	abc transporter atp-binding protein
RAHAQ_RS15905	COG2888	peptidyl-tyrosine sulfation
RAHAQ_RS15910	COG0495	leucyl-tRNA aminoacylation
RAHAQ_RS15915	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
RAHAQ_RS15920	COG1466	dna polymerase III delta subunit
RAHAQ_RS15925	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
RAHAQ_RS15930	COG0799	negative regulation of ribosome biogenesis
RAHAQ_RS15935	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
RAHAQ_RS15940	COG0768	penicillin binding
RAHAQ_RS15945	COG0772	Belongs to the SEDS family
RAHAQ_RS15950	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
RAHAQ_RS15955	COG1686	Belongs to the peptidase S11 family
RAHAQ_RS15960	COG2921	Belongs to the UPF0250 family
RAHAQ_RS15970	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
RAHAQ_RS15975	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
RAHAQ_RS15980	COG1126	abc transporter atp-binding protein
RAHAQ_RS15985	COG0765	amino acid transport
RAHAQ_RS15995	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
RAHAQ_RS16015	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
RAHAQ_RS16025	COG2814	Major facilitator Superfamily
RAHAQ_RS16035	COG3416	Protein conserved in bacteria
RAHAQ_RS16045	COG1505	serine-type exopeptidase activity
RAHAQ_RS16050	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
RAHAQ_RS16050	COG0248	Ppx GppA phosphatase
RAHAQ_RS16070	COG3706	GGDEF domain
RAHAQ_RS16085	COG2814	Major facilitator Superfamily
RAHAQ_RS16130	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
RAHAQ_RS16135	COG2501	S4 domain
RAHAQ_RS16140	COG5342	invasion associated locus B
RAHAQ_RS16150	COG0494	nUDIX hydrolase
RAHAQ_RS16160	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RAHAQ_RS16165	COG1393	Belongs to the ArsC family
RAHAQ_RS16170	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
RAHAQ_RS16175	COG1876	peptidase activity
RAHAQ_RS16190	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
RAHAQ_RS16195	COG0400	carboxylic ester hydrolase activity
RAHAQ_RS16205	COG2707	UPF0756 membrane protein
RAHAQ_RS16210	COG2321	neutral zinc metallopeptidase
RAHAQ_RS16215	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
RAHAQ_RS16220	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
RAHAQ_RS16225	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RAHAQ_RS16230	COG2716	regulation of RNA biosynthetic process
RAHAQ_RS16235	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
RAHAQ_RS16240	COG0628	permease
RAHAQ_RS16245	COG4783	chaperone-mediated protein folding
RAHAQ_RS16250	COG1393	Belongs to the ArsC family
RAHAQ_RS16255	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
RAHAQ_RS16260	COG2233	PERMEase
RAHAQ_RS16265	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
RAHAQ_RS16270	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
RAHAQ_RS16275	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
RAHAQ_RS16280	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RAHAQ_RS16285	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
RAHAQ_RS16295	COG2200	EAL domain
RAHAQ_RS16305	COG2239	Acts as a magnesium transporter
RAHAQ_RS16310	COG3447	MASE1 domain protein
RAHAQ_RS16310	COG5002	protein histidine kinase activity
RAHAQ_RS16310	COG5001	Diguanylate cyclase
RAHAQ_RS16315	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
RAHAQ_RS16320	COG0215	cysteine-tRNA ligase activity
RAHAQ_RS16325	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
RAHAQ_RS16330	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
RAHAQ_RS16340	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
RAHAQ_RS16345	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
RAHAQ_RS16350	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
RAHAQ_RS16355	COG4181	ATPase activity
RAHAQ_RS16360	COG2755	lipolytic protein G-D-S-L family
RAHAQ_RS16365	COG0300	oxidoreductase activity
RAHAQ_RS16370	COG3118	belongs to the thioredoxin family
RAHAQ_RS16375	COG0330	HflC and HflK could
RAHAQ_RS16380	COG1585	Membrane protein implicated in regulation of membrane protease activity
RAHAQ_RS16390	COG2217	Heavy metal translocating P-type atpase
RAHAQ_RS16395	COG3735	TraB family
RAHAQ_RS16400	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
RAHAQ_RS16405	COG2223	nitrite transmembrane transporter activity
RAHAQ_RS16415	COG4651	solute:proton antiporter activity
RAHAQ_RS16415	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
RAHAQ_RS16420	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RAHAQ_RS16425	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
RAHAQ_RS16435	COG0326	Molecular chaperone. Has ATPase activity
RAHAQ_RS16440	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
RAHAQ_RS16445	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
RAHAQ_RS16455	COG0366	Alpha amylase catalytic
RAHAQ_RS16460	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
RAHAQ_RS16465	COG2832	Protein of unknown function (DUF454)
RAHAQ_RS16480	COG3264	Mechanosensitive ion channel
RAHAQ_RS16480	COG1196	nuclear chromosome segregation
RAHAQ_RS16485	COG1309	transcriptional regulator
RAHAQ_RS16490	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RAHAQ_RS16495	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RAHAQ_RS16505	COG0257	Belongs to the bacterial ribosomal protein bL36 family
RAHAQ_RS16510	COG0803	Belongs to the bacterial solute-binding protein 9 family
RAHAQ_RS16515	COG1108	ABC-type Mn2 Zn2 transport systems permease components
RAHAQ_RS16540	COG0583	DNA-binding transcription factor activity
RAHAQ_RS16545	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
RAHAQ_RS16550	COG2252	PERMEase
RAHAQ_RS16555	COG3695	enzyme binding
RAHAQ_RS16560	COG3126	Type III secretion system lipoprotein chaperone (YscW)
RAHAQ_RS16565	COG1946	Acyl-CoA thioesterase
RAHAQ_RS16570	COG0004	ammonium transporteR
RAHAQ_RS16575	COG0347	Belongs to the P(II) protein family
RAHAQ_RS16580	COG1132	(ABC) transporter
RAHAQ_RS16585	COG1132	(ABC) transporter
RAHAQ_RS16590	COG1522	sequence-specific DNA binding
RAHAQ_RS16600	COG0561	phosphatase activity
RAHAQ_RS16605	COG4533	DNA binding
RAHAQ_RS16610	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
RAHAQ_RS16615	COG0824	Thioesterase
RAHAQ_RS16620	COG1555	photosystem II stabilization
RAHAQ_RS16625	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
RAHAQ_RS16635	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
RAHAQ_RS16640	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
RAHAQ_RS16645	COG0740	serine-type endopeptidase activity
RAHAQ_RS16655	COG0271	Belongs to the BolA IbaG family
RAHAQ_RS16660	COG3056	Lipoprotein
RAHAQ_RS16665	COG2223	nitrite transmembrane transporter activity
RAHAQ_RS16670	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
RAHAQ_RS16675	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
RAHAQ_RS16680	COG1845	cytochrome c oxidase, subunit III
RAHAQ_RS16685	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
RAHAQ_RS16690	COG0109	protoheme IX farnesyltransferase activity
RAHAQ_RS16695	COG2814	Major facilitator Superfamily
RAHAQ_RS16700	COG0673	inositol 2-dehydrogenase activity
RAHAQ_RS16710	COG1666	GTP binding
RAHAQ_RS16715	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
RAHAQ_RS16720	COG0693	protein deglycase activity
RAHAQ_RS16725	COG0301	tRNA thio-modification
RAHAQ_RS16725	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
RAHAQ_RS16735	COG0142	geranyltranstransferase activity
RAHAQ_RS16740	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
RAHAQ_RS16745	COG0667	Aldo Keto reductase
RAHAQ_RS16750	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
RAHAQ_RS16755	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
RAHAQ_RS16770	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
RAHAQ_RS16770	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
RAHAQ_RS16775	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
RAHAQ_RS16780	COG4238	major outer membrane lipoprotein
RAHAQ_RS16785	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
RAHAQ_RS16790	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
RAHAQ_RS16795	COG1862	Preprotein translocase
RAHAQ_RS16800	COG0343	queuine tRNA-ribosyltransferase activity
RAHAQ_RS16810	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
RAHAQ_RS16815	COG0450	alkyl hydroperoxide reductase
RAHAQ_RS16825	COG1113	amino acid transport
RAHAQ_RS16835	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
RAHAQ_RS16850	COG5002	protein histidine kinase activity
RAHAQ_RS16855	COG0745	RESPONSE REGULATOR receiver
RAHAQ_RS16860	COG0420	3'-5' exonuclease activity
RAHAQ_RS16865	COG0419	ATPase involved in DNA repair
RAHAQ_RS16870	COG0419	ATPase involved in DNA repair
RAHAQ_RS16880	COG1940	carbohydrate kinase activity
RAHAQ_RS16885	COG2974	May be involved in recombination
RAHAQ_RS16895	COG4126	flavin adenine dinucleotide binding
RAHAQ_RS16910	COG1414	Transcriptional regulator
RAHAQ_RS16915	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
RAHAQ_RS16930	COG2354	Protein conserved in bacteria
RAHAQ_RS16935	COG2226	methyltransferase
RAHAQ_RS16945	COG3385	transposase activity
RAHAQ_RS16955	COG2897	thiosulfate sulfurtransferase activity
RAHAQ_RS16990	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
RAHAQ_RS17000	COG0560	Phosphoserine phosphatase
RAHAQ_RS17005	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RAHAQ_RS17005	COG1263	PTS System
RAHAQ_RS17010	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
RAHAQ_RS17015	COG1737	Transcriptional regulator
RAHAQ_RS17020	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
RAHAQ_RS17030	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
RAHAQ_RS17035	COG1381	Involved in DNA repair and RecF pathway recombination
RAHAQ_RS17040	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
RAHAQ_RS17045	COG0571	ribonuclease III activity
RAHAQ_RS17055	COG0481	GTPase activity
RAHAQ_RS17065	COG3086	response to oxidative stress
RAHAQ_RS17085	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
RAHAQ_RS17095	COG0513	Belongs to the DEAD box helicase family
RAHAQ_RS17100	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
RAHAQ_RS17105	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
RAHAQ_RS17110	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
RAHAQ_RS17115	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
RAHAQ_RS17120	COG0497	DNA recombination
RAHAQ_RS17130	COG3385	transposase activity
RAHAQ_RS17135	COG2914	Belongs to the UPF0125 (RnfH) family
RAHAQ_RS17140	COG2867	negative regulation of translational initiation
RAHAQ_RS17145	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
RAHAQ_RS17150	COG0582	viral genome integration into host DNA
RAHAQ_RS17160	COG0640	Transcriptional regulator
RAHAQ_RS17165	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
RAHAQ_RS17175	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RAHAQ_RS17180	COG1349	DNA-binding transcription factor activity
RAHAQ_RS17190	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
RAHAQ_RS17195	COG3414	Phosphotransferase system galactitol-specific IIB component
RAHAQ_RS17200	COG3775	system Galactitol-specific IIC component
RAHAQ_RS17205	COG1063	alcohol dehydrogenase
RAHAQ_RS17225	COG2169	Transcriptional regulator
RAHAQ_RS17225	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
RAHAQ_RS17235	COG1396	sequence-specific DNA binding
RAHAQ_RS17250	COG1473	amidohydrolase
RAHAQ_RS17255	COG0583	DNA-binding transcription factor activity
RAHAQ_RS17260	COG0384	phenazine biosynthesis protein PhzF
RAHAQ_RS17270	COG1272	protein, Hemolysin III
RAHAQ_RS17285	COG3842	ATPase activity
RAHAQ_RS17290	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
RAHAQ_RS17295	COG0395	ABC-type sugar transport system, permease component
RAHAQ_RS17300	COG1175	transmembrane transport
RAHAQ_RS17315	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RAHAQ_RS17320	COG1940	carbohydrate kinase activity
RAHAQ_RS17325	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
RAHAQ_RS17330	COG1172	Belongs to the binding-protein-dependent transport system permease family
RAHAQ_RS17335	COG1172	Belongs to the binding-protein-dependent transport system permease family
RAHAQ_RS17340	COG1129	ABC transporter
RAHAQ_RS17350	COG1349	DNA-binding transcription factor activity
RAHAQ_RS17355	COG1028	Short-chain dehydrogenase reductase Sdr
RAHAQ_RS17360	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
RAHAQ_RS17360	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
RAHAQ_RS17365	COG0509	glycine decarboxylation via glycine cleavage system
RAHAQ_RS17370	COG0404	The glycine cleavage system catalyzes the degradation of glycine
RAHAQ_RS17375	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RAHAQ_RS17380	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RAHAQ_RS17385	COG0006	proline dipeptidase activity
RAHAQ_RS17390	COG3079	Belongs to the UPF0149 family
RAHAQ_RS17395	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
RAHAQ_RS17400	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
RAHAQ_RS17410	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
RAHAQ_RS17415	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
RAHAQ_RS17420	COG0583	DNA-binding transcription factor activity
RAHAQ_RS17425	COG0583	DNA-binding transcription factor activity
RAHAQ_RS17430	COG4221	oxidoreductase activity
RAHAQ_RS17440	COG1279	arginine transmembrane transporter activity
RAHAQ_RS17445	COG0668	transmembrane transport
RAHAQ_RS17450	COG2223	nitrite transmembrane transporter activity
RAHAQ_RS17455	COG3250	beta-galactosidase activity
RAHAQ_RS17460	COG1609	Transcriptional regulator
RAHAQ_RS17465	COG0191	fructose-bisphosphate aldolase activity
RAHAQ_RS17470	COG0126	phosphoglycerate kinase activity
RAHAQ_RS17475	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
RAHAQ_RS17480	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
RAHAQ_RS17485	COG0501	Belongs to the peptidase M48B family
RAHAQ_RS17495	COG3121	Chaperone
RAHAQ_RS17500	COG3188	usher protein
RAHAQ_RS17515	COG3539	Fimbrial protein
RAHAQ_RS17525	COG1166	arginine decarboxylase activity
RAHAQ_RS17530	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
RAHAQ_RS17565	COG2814	Major facilitator Superfamily
RAHAQ_RS17570	COG3091	SprT-like family
RAHAQ_RS17575	COG2356	endonuclease I
RAHAQ_RS17580	COG1385	rRNA (uridine-N3-)-methyltransferase activity
RAHAQ_RS17585	COG0189	ligase activity
RAHAQ_RS17590	COG1678	Uncharacterized ACR, COG1678
RAHAQ_RS17595	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
RAHAQ_RS17600	COG2805	Type II/IV secretion system protein
RAHAQ_RS17605	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
RAHAQ_RS17610	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
RAHAQ_RS17615	COG0762	integral membrane protein
RAHAQ_RS17620	COG1872	DUF167
RAHAQ_RS17625	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
RAHAQ_RS17630	COG0635	Involved in the biosynthesis of porphyrin-containing compound
RAHAQ_RS17640	COG2066	Belongs to the glutaminase family
RAHAQ_RS17645	COG3171	Protein conserved in bacteria
RAHAQ_RS17650	COG0220	tRNA (guanine-N7-)-methyltransferase activity
RAHAQ_RS17655	COG1194	a g-specific adenine glycosylase
RAHAQ_RS17665	COG0741	lytic transglycosylase activity
RAHAQ_RS17680	COG0438	transferase activity, transferring glycosyl groups
RAHAQ_RS17690	COG0438	transferase activity, transferring glycosyl groups
RAHAQ_RS17700	COG2244	polysaccharide biosynthetic process
RAHAQ_RS17705	COG0489	protein tyrosine kinase activity
RAHAQ_RS17705	COG3206	protein involved in exopolysaccharide biosynthesis
RAHAQ_RS17720	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
RAHAQ_RS17725	COG1982	Orn Lys Arg decarboxylase major
RAHAQ_RS17735	COG2271	Major facilitator Superfamily
RAHAQ_RS17740	COG2731	YhcH YjgK YiaL family protein
RAHAQ_RS17745	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RAHAQ_RS17750	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RAHAQ_RS17755	COG3568	Endonuclease Exonuclease Phosphatase
RAHAQ_RS17760	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
RAHAQ_RS17765	COG0392	lysyltransferase activity
RAHAQ_RS17770	COG1914	H( )-stimulated, divalent metal cation uptake system
RAHAQ_RS17775	COG0840	transmembrane signaling receptor activity
RAHAQ_RS17805	COG3594	Acyltransferase
RAHAQ_RS17810	COG3547	Transposase (IS116 IS110 IS902 family)
RAHAQ_RS17815	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
RAHAQ_RS17825	COG0438	transferase activity, transferring glycosyl groups
RAHAQ_RS17845	COG0438	transferase activity, transferring glycosyl groups
RAHAQ_RS17875	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
RAHAQ_RS17905	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
RAHAQ_RS17915	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RAHAQ_RS17945	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
RAHAQ_RS17955	COG0531	amino acid
RAHAQ_RS17980	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RAHAQ_RS17985	COG0765	amino acid transport
RAHAQ_RS18005	COG0583	DNA-binding transcription factor activity
RAHAQ_RS18025	COG0583	DNA-binding transcription factor activity
RAHAQ_RS18030	COG0477	Major facilitator Superfamily
RAHAQ_RS18075	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
RAHAQ_RS18080	COG4948	Mandelate Racemase Muconate Lactonizing
RAHAQ_RS18085	COG4948	Mandelate Racemase Muconate Lactonizing
RAHAQ_RS18090	COG2271	Major facilitator Superfamily
RAHAQ_RS18095	COG3835	regulator
RAHAQ_RS18100	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RAHAQ_RS18105	COG0232	Belongs to the dGTPase family. Type 2 subfamily
RAHAQ_RS18110	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
RAHAQ_RS18115	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
RAHAQ_RS18125	COG0316	Belongs to the HesB IscA family
RAHAQ_RS18135	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
RAHAQ_RS18140	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RAHAQ_RS18145	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
RAHAQ_RS18150	COG1120	ATPase activity
RAHAQ_RS18155	COG4774	siderophore transport
RAHAQ_RS18160	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
RAHAQ_RS18165	COG1643	Atp-dependent helicase
RAHAQ_RS18170	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
RAHAQ_RS18175	COG1489	DNA binding
RAHAQ_RS18190	COG0617	tRNA 3'-terminal CCA addition
RAHAQ_RS18195	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
RAHAQ_RS18200	COG0642	Histidine kinase
RAHAQ_RS18215	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
RAHAQ_RS18220	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
RAHAQ_RS18225	COG0842	Transport permease protein
RAHAQ_RS18230	COG1131	(ABC) transporter
RAHAQ_RS18235	COG0288	reversible hydration of carbon dioxide
RAHAQ_RS18265	COG1349	DNA-binding transcription factor activity
RAHAQ_RS18270	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
RAHAQ_RS18275	COG1028	Short-chain dehydrogenase reductase Sdr
RAHAQ_RS18290	COG3730	PTS system glucitol sorbitol-specific
RAHAQ_RS18295	COG2132	Multicopper oxidase
RAHAQ_RS18305	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
RAHAQ_RS18310	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
RAHAQ_RS18320	COG0697	spore germination
RAHAQ_RS18325	COG3112	Uncharacterised protein family (UPF0231)
RAHAQ_RS18355	COG1176	ABC-type spermidine putrescine transport system, permease component I
RAHAQ_RS18365	COG0584	glycerophosphoryl diester phosphodiesterase
RAHAQ_RS18370	COG1940	carbohydrate kinase activity
RAHAQ_RS18380	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
RAHAQ_RS18390	COG0508	dehydrogenase complex catalyzes the overall conversion of
RAHAQ_RS18395	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
RAHAQ_RS18400	COG2186	Transcriptional regulator
RAHAQ_RS18405	COG1113	amino acid transport
RAHAQ_RS18410	COG2211	Major facilitator Superfamily
RAHAQ_RS18415	COG3940	Belongs to the glycosyl hydrolase 43 family
RAHAQ_RS18420	COG3725	Membrane protein required for beta-lactamase induction
RAHAQ_RS18430	COG0157	Belongs to the NadC ModD family
RAHAQ_RS18435	COG4969	Belongs to the N-Me-Phe pilin family
RAHAQ_RS18440	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
RAHAQ_RS18450	COG0516	GMP reductase activity
RAHAQ_RS18455	COG0237	dephospho-CoA kinase activity
RAHAQ_RS18460	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
RAHAQ_RS18465	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
RAHAQ_RS18470	COG3385	transposase activity
RAHAQ_RS18475	COG0494	nUDIX hydrolase
RAHAQ_RS18500	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
RAHAQ_RS18505	COG0849	cell division
RAHAQ_RS18510	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
RAHAQ_RS18520	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
RAHAQ_RS18525	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
RAHAQ_RS18530	COG0772	Belongs to the SEDS family
RAHAQ_RS18540	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
RAHAQ_RS18545	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
RAHAQ_RS18550	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
RAHAQ_RS18555	COG0768	penicillin binding
RAHAQ_RS18560	COG3116	cell division
RAHAQ_RS18565	COG0275	rRNA processing
RAHAQ_RS18570	COG2001	Belongs to the MraZ family
RAHAQ_RS18575	COG1609	Transcriptional regulator
RAHAQ_RS18585	COG0028	Belongs to the TPP enzyme family
RAHAQ_RS18590	COG1022	Amp-dependent synthetase and ligase
RAHAQ_RS18600	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
RAHAQ_RS18605	COG0473	3-isopropylmalate dehydrogenase activity
RAHAQ_RS18610	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
RAHAQ_RS18615	COG0066	3-isopropylmalate dehydratase activity
RAHAQ_RS18625	COG2814	Major facilitator Superfamily
RAHAQ_RS18640	COG4143	(ABC) transporter
RAHAQ_RS18645	COG1178	ABC-type Fe3 transport system permease component
RAHAQ_RS18655	COG0586	Pfam SNARE associated Golgi protein
RAHAQ_RS18660	COG0417	DNA replication proofreading
RAHAQ_RS18665	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
RAHAQ_RS18670	COG0564	pseudouridine synthase activity
RAHAQ_RS18680	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
RAHAQ_RS18685	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
RAHAQ_RS18700	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
RAHAQ_RS18705	COG2967	ApaG domain
RAHAQ_RS18710	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
RAHAQ_RS18715	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
RAHAQ_RS18725	COG2966	Psort location CytoplasmicMembrane, score
RAHAQ_RS18730	COG1280	lysine exporter protein (LysE YggA)
RAHAQ_RS18735	COG0475	glutathione-regulated potassium exporter activity
RAHAQ_RS18735	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
RAHAQ_RS18750	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
RAHAQ_RS18760	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
RAHAQ_RS18775	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
RAHAQ_RS18780	COG1047	Peptidyl-prolyl cis-trans
RAHAQ_RS18785	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
RAHAQ_RS18795	COG0196	riboflavin kinase activity
RAHAQ_RS18805	COG0583	DNA-binding transcription factor activity
RAHAQ_RS18810	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
RAHAQ_RS18820	COG0443	Heat shock 70 kDa protein
RAHAQ_RS18825	COG1584	GPR1 FUN34 yaaH family protein
RAHAQ_RS18835	COG0521	Mo-molybdopterin cofactor biosynthetic process
RAHAQ_RS18840	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
RAHAQ_RS18845	COG1115	amino acid carrier protein
RAHAQ_RS18850	COG3022	response to hydroperoxide
RAHAQ_RS18870	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
RAHAQ_RS18875	COG0745	RESPONSE REGULATOR receiver
RAHAQ_RS18880	COG3045	CreA protein
RAHAQ_RS18885	COG2207	Transcriptional regulator
RAHAQ_RS18885	COG3708	Transcriptional regulator
RAHAQ_RS18890	COG0406	alpha-ribazole phosphatase activity
RAHAQ_RS18895	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
RAHAQ_RS18900	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
RAHAQ_RS18905	COG0741	lytic transglycosylase activity
RAHAQ_RS18910	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
RAHAQ_RS18920	COG0488	(ABC) transporter
RAHAQ_RS18930	COG0604	alcohol dehydrogenase
RAHAQ_RS18940	COG3064	Membrane
RAHAQ_RS18955	COG0560	Phosphoserine phosphatase
RAHAQ_RS18960	COG3726	membrane protein affecting hemolysin expression
RAHAQ_RS18965	COG3550	peptidyl-serine autophosphorylation
RAHAQ_RS18980	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
RAHAQ_RS18985	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
RAHAQ_RS18990	COG0084	hydrolase, TatD family'
RAHAQ_RS18995	COG4667	esterase of the alpha-beta hydrolase superfamily
RAHAQ_RS19000	COG2823	Periplasmic or secreted lipoprotein
RAHAQ_RS19005	COG3979	chitinase
RAHAQ_RS19010	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
RAHAQ_RS19015	COG3550	peptidyl-serine autophosphorylation
RAHAQ_RS19030	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
RAHAQ_RS19035	COG2813	Specifically methylates the guanine in position
RAHAQ_RS19040	COG0667	Aldo Keto reductase
RAHAQ_RS19045	COG0583	DNA-binding transcription factor activity
RAHAQ_RS19070	COG3706	GGDEF domain
RAHAQ_RS19080	COG4977	sequence-specific DNA binding
RAHAQ_RS19080	COG1917	Cupin 2, conserved barrel domain protein
RAHAQ_RS19085	COG2169	Transcriptional regulator
RAHAQ_RS19085	COG1917	Cupin 2, conserved barrel domain protein
RAHAQ_RS19090	COG1070	Carbohydrate kinase
RAHAQ_RS19100	COG0235	Class ii aldolase
RAHAQ_RS19105	COG1454	alcohol dehydrogenase
RAHAQ_RS19130	COG1760	l-serine dehydratase
RAHAQ_RS19135	COG0814	amino acid
RAHAQ_RS19145	COG2199	diguanylate cyclase activity
RAHAQ_RS19150	COG2885	chlorophyll binding
RAHAQ_RS19170	COG1401	restriction endodeoxyribonuclease activity
RAHAQ_RS19205	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
RAHAQ_RS19210	COG0795	lipopolysaccharide-transporting ATPase activity
RAHAQ_RS19215	COG0795	lipopolysaccharide-transporting ATPase activity
RAHAQ_RS19220	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
RAHAQ_RS19225	COG2927	DNA polymerase III (CHI subunit)
RAHAQ_RS19235	COG0583	DNA-binding transcription factor activity
RAHAQ_RS19245	COG3188	usher protein
RAHAQ_RS19280	COG1737	Transcriptional regulator
RAHAQ_RS19290	COG2723	6-phospho-beta-galactosidase activity
RAHAQ_RS19300	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
RAHAQ_RS19305	COG0366	Alpha amylase catalytic
RAHAQ_RS19310	COG2731	YhcH YjgK YiaL family protein
RAHAQ_RS19320	COG0549	Belongs to the carbamate kinase family
RAHAQ_RS19330	COG1288	antiporter activity
RAHAQ_RS19335	COG1438	arginine binding
RAHAQ_RS19340	COG0540	Belongs to the ATCase OTCase family
RAHAQ_RS19385	COG2308	Evidence 4 Homologs of previously reported genes of
RAHAQ_RS19395	COG1305	Transglutaminase-like
RAHAQ_RS19405	COG1609	Transcriptional regulator
RAHAQ_RS19415	COG3842	ATPase activity
RAHAQ_RS19420	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RAHAQ_RS19425	COG1554	hydrolase, family 65, central catalytic
RAHAQ_RS19430	COG0673	inositol 2-dehydrogenase activity
RAHAQ_RS19435	COG1082	Xylose isomerase domain protein TIM barrel
RAHAQ_RS19440	COG1063	alcohol dehydrogenase
RAHAQ_RS19445	COG0395	ABC-type sugar transport system, permease component
RAHAQ_RS19450	COG1175	transmembrane transport
RAHAQ_RS19455	COG1653	transport
RAHAQ_RS19460	COG0366	Alpha amylase catalytic
RAHAQ_RS19470	COG2721	sulfolactate sulfo-lyase activity
RAHAQ_RS19475	COG0246	Mannitol dehydrogenase
RAHAQ_RS19480	COG1904	glucuronate isomerase
RAHAQ_RS19485	COG2271	Major facilitator Superfamily
RAHAQ_RS19495	COG0586	Pfam SNARE associated Golgi protein
RAHAQ_RS19505	COG1422	Protein of unknown function (DUF1090)
RAHAQ_RS19510	COG4575	ribosome binding
RAHAQ_RS19515	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
RAHAQ_RS19525	COG2259	Doxx family
RAHAQ_RS19530	COG0435	Glutathione S-transferase
RAHAQ_RS19535	COG0583	DNA-binding transcription factor activity
RAHAQ_RS19540	COG1741	Belongs to the pirin family
RAHAQ_RS19545	COG2165	general secretion pathway protein
RAHAQ_RS19560	COG4796	Type ii and iii secretion system protein
RAHAQ_RS19580	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
RAHAQ_RS19585	COG1459	type II secretion system
RAHAQ_RS19600	COG0739	heme binding
RAHAQ_RS19605	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
RAHAQ_RS19610	COG3107	peptidoglycan biosynthetic process
RAHAQ_RS19615	COG0792	nuclease activity
RAHAQ_RS19620	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
RAHAQ_RS19625	COG2823	Periplasmic or secreted lipoprotein
RAHAQ_RS19630	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
RAHAQ_RS19635	COG5002	protein histidine kinase activity
RAHAQ_RS19635	COG2198	Histidine kinase
RAHAQ_RS19635	COG0784	Response regulator, receiver
RAHAQ_RS19640	COG0067	glutamate synthase
RAHAQ_RS19640	COG0070	glutamate synthase
RAHAQ_RS19640	COG0069	glutamate synthase activity
RAHAQ_RS19645	COG0493	'glutamate synthase
RAHAQ_RS19650	COG2969	positive regulation of protein catabolic process
RAHAQ_RS19655	COG0625	glutathione transferase activity
RAHAQ_RS19660	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RAHAQ_RS19665	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
RAHAQ_RS19675	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
RAHAQ_RS19680	COG3105	Protein conserved in bacteria
RAHAQ_RS19685	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RAHAQ_RS19690	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RAHAQ_RS19695	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
RAHAQ_RS19700	COG5007	Belongs to the BolA IbaG family
RAHAQ_RS19705	COG3113	response to antibiotic
RAHAQ_RS19710	COG2854	intermembrane phospholipid transfer
RAHAQ_RS19715	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
RAHAQ_RS19720	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
RAHAQ_RS19725	COG1127	ABC transporter
RAHAQ_RS19730	COG0530	calcium, potassium:sodium antiporter activity
RAHAQ_RS19740	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
RAHAQ_RS19745	COG3117	lipopolysaccharide transmembrane transporter activity
RAHAQ_RS19750	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
RAHAQ_RS19755	COG1137	ATPase activity
RAHAQ_RS19760	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
RAHAQ_RS19775	COG1660	Displays ATPase and GTPase activities
RAHAQ_RS19780	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
RAHAQ_RS19785	COG3711	transcriptional antiterminator
RAHAQ_RS19785	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
RAHAQ_RS19800	COG3964	amidohydrolase
RAHAQ_RS19830	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
RAHAQ_RS19835	COG3783	Cytochrome b(562)
RAHAQ_RS19840	COG0312	modulator of DNA gyrase
RAHAQ_RS19845	COG3028	Belongs to the UPF0307 family
RAHAQ_RS19850	COG2732	(Barnase) inhibitor
RAHAQ_RS19855	COG4290	ribonuclease
RAHAQ_RS19860	COG1012	belongs to the aldehyde dehydrogenase family
RAHAQ_RS19865	COG0110	maltose O-acetyltransferase activity
RAHAQ_RS19870	COG1289	transmembrane transporter activity
RAHAQ_RS19875	COG1566	PFAM secretion protein HlyD family protein
RAHAQ_RS19885	COG0583	DNA-binding transcription factor activity
RAHAQ_RS19890	COG0312	modulator of DNA gyrase
RAHAQ_RS19895	COG3164	Protein of unknown function
RAHAQ_RS19900	COG1530	ribonuclease E activity
RAHAQ_RS19910	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
RAHAQ_RS19915	COG1792	Involved in formation and maintenance of cell shape
RAHAQ_RS19920	COG1077	Cell shape determining protein MreB Mrl
RAHAQ_RS19925	COG2199	diguanylate cyclase activity
RAHAQ_RS19925	COG2200	EAL domain
RAHAQ_RS19930	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
RAHAQ_RS19935	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
RAHAQ_RS19940	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
RAHAQ_RS19945	COG0511	ligase activity, forming carbon-carbon bonds
RAHAQ_RS19950	COG0439	Biotin carboxylase
RAHAQ_RS19955	COG3924	membrane
RAHAQ_RS19960	COG4145	pantothenate transmembrane transporter activity
RAHAQ_RS19965	COG2264	protein methyltransferase activity
RAHAQ_RS19990	COG1560	Kdo2-lipid A biosynthetic process
RAHAQ_RS20000	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RAHAQ_RS20005	COG4597	amino acid ABC transporter
RAHAQ_RS20010	COG0765	amino acid transport
RAHAQ_RS20015	COG1126	abc transporter atp-binding protein
RAHAQ_RS20025	COG1380	Effector of murein hydrolase LrgA
RAHAQ_RS20030	COG0583	DNA-binding transcription factor activity
RAHAQ_RS20035	COG0025	NhaP-type Na H and K H
RAHAQ_RS20040	COG2252	PERMEase
RAHAQ_RS20045	COG0625	glutathione transferase activity
RAHAQ_RS20055	COG0840	transmembrane signaling receptor activity
RAHAQ_RS20060	COG0483	inositol monophosphate 1-phosphatase activity
RAHAQ_RS20065	COG1280	lysine exporter protein (LysE YggA)
RAHAQ_RS20070	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
RAHAQ_RS20090	COG0625	glutathione transferase activity
RAHAQ_RS20095	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RAHAQ_RS20125	COG1028	Short-chain dehydrogenase reductase Sdr
RAHAQ_RS20130	COG0583	DNA-binding transcription factor activity
RAHAQ_RS20160	COG0583	DNA-binding transcription factor activity
RAHAQ_RS20165	COG0402	S-adenosylhomocysteine deaminase activity
RAHAQ_RS20175	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
RAHAQ_RS20190	COG2382	esterase
RAHAQ_RS20195	COG0583	DNA-binding transcription factor activity
RAHAQ_RS20200	COG0625	glutathione transferase activity
RAHAQ_RS20210	COG2315	Protein conserved in bacteria
RAHAQ_RS20225	COG1501	Belongs to the glycosyl hydrolase 31 family
RAHAQ_RS20235	COG3684	Belongs to the aldolase LacD family
RAHAQ_RS20245	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RAHAQ_RS20250	COG1349	DNA-binding transcription factor activity
RAHAQ_RS20255	COG1448	Aminotransferase
RAHAQ_RS20260	COG1028	Short-chain dehydrogenase reductase Sdr
RAHAQ_RS20270	COG1522	sequence-specific DNA binding
RAHAQ_RS20290	COG0604	alcohol dehydrogenase
RAHAQ_RS20300	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
RAHAQ_RS20305	COG0735	belongs to the Fur family
RAHAQ_RS20310	COG3237	CsbD-like
RAHAQ_RS20315	COG0534	Mate efflux family protein
RAHAQ_RS20320	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
RAHAQ_RS20325	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
RAHAQ_RS20330	COG2937	Belongs to the GPAT DAPAT family
RAHAQ_RS20335	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
RAHAQ_RS20340	COG3161	chorismate lyase activity
RAHAQ_RS20345	COG3223	Belongs to the PsiE family
RAHAQ_RS20350	COG0166	Belongs to the GPI family
RAHAQ_RS20355	COG0527	aspartate kinase activity
RAHAQ_RS20365	COG1283	sodium-dependent phosphate transmembrane transporter activity
RAHAQ_RS20375	COG3842	ATPase activity
RAHAQ_RS20385	COG0395	ABC-type sugar transport system, permease component
RAHAQ_RS20415	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
RAHAQ_RS20425	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
RAHAQ_RS20430	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
RAHAQ_RS20460	COG0151	Belongs to the GarS family
RAHAQ_RS20480	COG1515	deoxyribonuclease V activity
RAHAQ_RS20485	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
RAHAQ_RS20495	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
RAHAQ_RS20500	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
RAHAQ_RS20505	COG0352	thiamine-phosphate diphosphorylase activity
RAHAQ_RS20510	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
RAHAQ_RS20515	COG2104	thiamine diphosphate biosynthetic process
RAHAQ_RS20520	COG2022	thiamine diphosphate biosynthetic process
RAHAQ_RS20530	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
RAHAQ_RS20535	COG0085	RNA polymerase activity
RAHAQ_RS20540	COG0222	ribosome binding
RAHAQ_RS20545	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
RAHAQ_RS20555	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
RAHAQ_RS20560	COG0250	Participates in transcription elongation, termination and antitermination
RAHAQ_RS20570	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
RAHAQ_RS20600	COG1072	(Pantothenic acid kinase))
RAHAQ_RS20605	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
RAHAQ_RS20605	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
RAHAQ_RS20610	COG0812	UDP-N-acetylmuramate dehydrogenase activity
RAHAQ_RS20645	COG1739	Uncharacterized protein family UPF0029
RAHAQ_RS20650	COG0006	proline dipeptidase activity
RAHAQ_RS20655	COG1250	3-hydroxyacyl-CoA dehydrogenase
RAHAQ_RS20655	COG1024	Enoyl-CoA hydratase
RAHAQ_RS20660	COG0183	Belongs to the thiolase family
RAHAQ_RS20670	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
RAHAQ_RS20685	COG0084	hydrolase, TatD family'
RAHAQ_RS20690	COG0805	protein transport
RAHAQ_RS20705	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
RAHAQ_RS20710	COG3165	ubiquinone biosynthetic process from chorismate
RAHAQ_RS20720	COG1322	Protein conserved in bacteria
RAHAQ_RS20725	COG0586	Pfam SNARE associated Golgi protein
RAHAQ_RS20735	COG0753	catalase activity
RAHAQ_RS20740	COG0412	Dienelactone hydrolase
RAHAQ_RS20745	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
RAHAQ_RS20750	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
RAHAQ_RS20750	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
RAHAQ_RS20750	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
RAHAQ_RS20755	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
RAHAQ_RS20760	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
RAHAQ_RS20765	COG1882	Formate acetyltransferase
RAHAQ_RS20770	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
RAHAQ_RS20775	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
RAHAQ_RS20780	COG2207	Transcriptional regulator
RAHAQ_RS20790	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
RAHAQ_RS20800	COG0583	DNA-binding transcription factor activity
RAHAQ_RS20820	COG0584	glycerophosphoryl diester phosphodiesterase
RAHAQ_RS20830	COG0395	ABC-type sugar transport system, permease component
RAHAQ_RS20835	COG1175	transmembrane transport
RAHAQ_RS20840	COG1653	transport
RAHAQ_RS20860	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RAHAQ_RS20865	COG0410	ABC transporter
RAHAQ_RS20875	COG4177	L-phenylalanine transmembrane transporter activity
RAHAQ_RS20900	COG2177	Part of the ABC transporter FtsEX involved in
RAHAQ_RS20905	COG2884	Cell division ATP-binding protein ftsE
RAHAQ_RS20910	COG0552	protein localization to endoplasmic reticulum
RAHAQ_RS20915	COG0742	ribosomal rna small subunit methyltransferase
RAHAQ_RS20920	COG3776	membrane
RAHAQ_RS20925	COG3714	YhhN family
RAHAQ_RS20940	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
RAHAQ_RS20965	COG2271	Major facilitator Superfamily
RAHAQ_RS20970	COG3842	ATPase activity
RAHAQ_RS20980	COG1609	Transcriptional regulator
RAHAQ_RS20990	COG1175	transmembrane transport
RAHAQ_RS20995	COG0395	ABC-type sugar transport system, permease component
RAHAQ_RS21000	COG0366	Alpha amylase catalytic
RAHAQ_RS21005	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
RAHAQ_RS21020	COG3210	domain, Protein
RAHAQ_RS21045	COG1395	domain, Protein
RAHAQ_RS21060	COG0561	phosphatase activity
RAHAQ_RS21065	COG2267	carboxylic ester hydrolase activity
RAHAQ_RS21070	COG1280	lysine exporter protein (LysE YggA)
RAHAQ_RS21075	COG1280	lysine exporter protein (LysE YggA)
RAHAQ_RS21080	COG0514	ATP-dependent DNA helicase (RecQ)
RAHAQ_RS21085	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
RAHAQ_RS21090	COG2050	protein possibly involved in aromatic compounds catabolism
RAHAQ_RS21095	COG2962	Rard protein
RAHAQ_RS21100	COG3180	Ammonia monooxygenase
RAHAQ_RS21115	COG0210	DNA helicase
RAHAQ_RS21120	COG1011	Hydrolase
RAHAQ_RS21125	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
RAHAQ_RS21135	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
RAHAQ_RS21140	COG3072	Adenylate cyclase
RAHAQ_RS21145	COG0181	hydroxymethylbilane synthase activity
RAHAQ_RS21150	COG1587	Uroporphyrinogen-III synthase
RAHAQ_RS21155	COG2959	enzyme of heme biosynthesis
RAHAQ_RS21160	COG3071	HemY protein
RAHAQ_RS21195	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
RAHAQ_RS21205	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
RAHAQ_RS21210	COG2244	polysaccharide biosynthetic process
RAHAQ_RS21215	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
RAHAQ_RS21220	COG0456	acetyltransferase
RAHAQ_RS21225	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
RAHAQ_RS21230	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
RAHAQ_RS21235	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
RAHAQ_RS21240	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
RAHAQ_RS21245	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
RAHAQ_RS21250	COG3118	belongs to the thioredoxin family
RAHAQ_RS21260	COG0248	Ppx GppA phosphatase
RAHAQ_RS21275	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
RAHAQ_RS21280	COG0583	DNA-binding transcription factor activity
RAHAQ_RS21290	COG0129	dihydroxy-acid dehydratase activity
RAHAQ_RS21300	COG3978	acetolactate synthase activity
RAHAQ_RS21310	COG2814	Major facilitator Superfamily
RAHAQ_RS21315	COG0606	chelatase, subunit chli
RAHAQ_RS21320	COG3085	chromosome segregation
RAHAQ_RS21325	COG0583	DNA-binding transcription factor activity
RAHAQ_RS21330	COG1172	Belongs to the binding-protein-dependent transport system permease family
RAHAQ_RS21335	COG1172	Belongs to the binding-protein-dependent transport system permease family
RAHAQ_RS21340	COG1129	ABC transporter
RAHAQ_RS21345	COG1879	ABC-type sugar transport system periplasmic component
RAHAQ_RS21350	COG2963	transposase activity
RAHAQ_RS21355	COG2801	Transposase and inactivated derivatives
RAHAQ_RS21395	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
RAHAQ_RS21405	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
RAHAQ_RS21410	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
RAHAQ_RS21430	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
RAHAQ_RS21440	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
RAHAQ_RS21440	COG0678	peroxiredoxin activity
RAHAQ_RS21450	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
RAHAQ_RS21455	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
RAHAQ_RS21460	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
RAHAQ_RS21475	COG0460	homoserine dehydrogenase
RAHAQ_RS21475	COG0527	aspartate kinase activity
RAHAQ_RS21480	COG0626	cystathionine gamma-synthase activity
RAHAQ_RS21485	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
RAHAQ_RS21490	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
RAHAQ_RS21495	COG1609	Transcriptional regulator
RAHAQ_RS21500	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
RAHAQ_RS21505	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
RAHAQ_RS21510	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
RAHAQ_RS21515	COG1575	Belongs to the MenA family. Type 1 subfamily
RAHAQ_RS21520	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
RAHAQ_RS21525	COG3074	FtsZ-dependent cytokinesis
RAHAQ_RS21530	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
RAHAQ_RS21540	COG1494	fructose-1,6-bisphosphatase
RAHAQ_RS21545	COG2814	Major facilitator Superfamily
RAHAQ_RS21555	COG3152	Membrane
RAHAQ_RS21565	COG0149	triose-phosphate isomerase activity
RAHAQ_RS21580	COG3678	ATP-independent chaperone mediated protein folding
RAHAQ_RS21585	COG0745	RESPONSE REGULATOR receiver
RAHAQ_RS21590	COG2205	protein histidine kinase activity
RAHAQ_RS21595	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
RAHAQ_RS21600	COG1045	serine acetyltransferase
RAHAQ_RS21605	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
RAHAQ_RS21610	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
RAHAQ_RS21615	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
RAHAQ_RS21620	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
RAHAQ_RS21625	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
RAHAQ_RS21630	COG4942	peptidase
RAHAQ_RS21635	COG2861	carbohydrate metabolic process
RAHAQ_RS21640	COG0438	transferase activity, transferring glycosyl groups
RAHAQ_RS21655	COG0156	8-amino-7-oxononanoate synthase activity
RAHAQ_RS21660	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RAHAQ_RS21670	COG0859	PFAM glycosyl transferase family 9
RAHAQ_RS21690	COG1216	Glycosyl transferase, family 2
RAHAQ_RS21695	COG0859	PFAM glycosyl transferase family 9
RAHAQ_RS21705	COG1519	Transferase
RAHAQ_RS21720	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
RAHAQ_RS21725	COG0267	Belongs to the bacterial ribosomal protein bL33 family
RAHAQ_RS21730	COG0227	Belongs to the bacterial ribosomal protein bL28 family
RAHAQ_RS21735	COG2003	Belongs to the UPF0758 family
RAHAQ_RS21740	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
RAHAQ_RS21745	COG0756	dUTP diphosphatase activity
RAHAQ_RS21750	COG1309	transcriptional regulator
RAHAQ_RS21765	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
RAHAQ_RS21770	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
RAHAQ_RS21775	COG1561	YicC-like family, N-terminal region
RAHAQ_RS21780	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
RAHAQ_RS21790	COG2860	membrane
RAHAQ_RS21805	COG1758	RNA polymerase activity
RAHAQ_RS21810	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
RAHAQ_RS21815	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
RAHAQ_RS21820	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
RAHAQ_RS21825	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
RAHAQ_RS21830	COG0786	glutamate:sodium symporter activity
RAHAQ_RS21835	COG2233	PERMEase
RAHAQ_RS21840	COG2982	Protein involved in outer membrane biogenesis
RAHAQ_RS21845	COG0456	acetyltransferase
RAHAQ_RS21850	COG1490	D-aminoacyl-tRNA deacylase activity
RAHAQ_RS21855	COG1295	ribonuclease BN
RAHAQ_RS21860	COG1011	Hydrolase
RAHAQ_RS21870	COG0174	glutamine synthetase
RAHAQ_RS21875	COG3852	Histidine kinase
RAHAQ_RS21885	COG0635	Involved in the biosynthesis of porphyrin-containing compound
RAHAQ_RS21900	COG0218	Necessary for normal cell division and for the maintenance of normal septation
RAHAQ_RS21905	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
RAHAQ_RS21905	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
RAHAQ_RS21910	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
RAHAQ_RS21915	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
RAHAQ_RS21920	COG3084	Protein conserved in bacteria
RAHAQ_RS21925	COG0746	molybdenum cofactor guanylyltransferase activity
RAHAQ_RS21930	COG1763	Mo-molybdopterin cofactor biosynthetic process
RAHAQ_RS21955	COG2186	Transcriptional regulator
RAHAQ_RS21960	COG1609	Transcriptional regulator
RAHAQ_RS21965	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RAHAQ_RS21970	COG1879	ABC-type sugar transport system periplasmic component
RAHAQ_RS21975	COG1172	Belongs to the binding-protein-dependent transport system permease family
RAHAQ_RS21980	COG1129	ABC transporter
RAHAQ_RS21985	COG1869	D-ribose catabolic process
RAHAQ_RS21990	COG3158	transport of potassium into the cell
RAHAQ_RS22000	COG2425	protein containing a von Willebrand factor type A (vWA) domain
RAHAQ_RS22005	COG1522	sequence-specific DNA binding
RAHAQ_RS22010	COG0716	FMN binding
RAHAQ_RS22015	COG0445	tRNA wobble uridine modification
RAHAQ_RS22020	COG0357	Ribosomal RNA small subunit methyltransferase G
RAHAQ_RS22025	COG3312	ion transport
RAHAQ_RS22030	COG0356	it plays a direct role in the translocation of protons across the membrane
RAHAQ_RS22045	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
RAHAQ_RS22050	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
RAHAQ_RS22055	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
RAHAQ_RS22060	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
RAHAQ_RS22065	COG0355	proton-transporting ATP synthase activity, rotational mechanism
RAHAQ_RS22070	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
RAHAQ_RS22080	COG1187	pseudouridine synthase activity
RAHAQ_RS22085	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
RAHAQ_RS22090	COG0573	inorganic phosphate transmembrane transporter activity
RAHAQ_RS22095	COG0581	inorganic phosphate transmembrane transporter activity
RAHAQ_RS22105	COG0704	Plays a role in the regulation of phosphate uptake
RAHAQ_RS22115	COG3185	4-Hydroxyphenylpyruvate dioxygenase
RAHAQ_RS22115	COG1082	Xylose isomerase domain protein TIM barrel
RAHAQ_RS22120	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RAHAQ_RS22125	COG2252	PERMEase
RAHAQ_RS22130	COG0431	NADPH-dependent FMN reductase
RAHAQ_RS22135	COG2091	lysine biosynthetic process via aminoadipic acid
RAHAQ_RS22140	COG0840	transmembrane signaling receptor activity
RAHAQ_RS22145	COG0583	DNA-binding transcription factor activity
RAHAQ_RS22155	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
RAHAQ_RS22160	COG0706	membrane insertase activity
RAHAQ_RS22300	COG0751	glycine-tRNA ligase activity
RAHAQ_RS22375	COG0243	molybdopterin cofactor binding
RAHAQ_RS22375	COG3383	formate dehydrogenase (NAD+) activity
RAHAQ_RS22505	COG4770	biotin carboxylase activity
RAHAQ_RS22605	COG1473	amidohydrolase
RAHAQ_RS22770	COG2982	Protein involved in outer membrane biogenesis
RAHAQ_RS23120	COG0477	Major facilitator Superfamily
RAHAQ_RS23195	COG1609	Transcriptional regulator
RAHAQ_RS23225	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
RAHAQ_RS23230	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
RAHAQ_RS23235	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
RAHAQ_RS23270	COG0297	glycogen (starch) synthase activity
RAHAQ_RS23290	COG0058	SHG alpha-glucan phosphorylase activity
RAHAQ_RS23310	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
RAHAQ_RS23460	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
RAHAQ_RS23475	COG2183	response to ionizing radiation
RAHAQ_RS23505	COG2373	Large extracellular alpha-helical protein
RAHAQ_RS23520	COG3188	usher protein
RAHAQ_RS23645	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
RAHAQ_RS23770	COG1929	Belongs to the glycerate kinase type-1 family
RAHAQ_RS24050	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
RAHAQ_RS24140	COG4232	protein-disulfide reductase activity
RAHAQ_RS24150	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
RAHAQ_RS24205	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
RAHAQ_RS24215	COG1053	succinate dehydrogenase
RAHAQ_RS24500	COG3385	transposase activity
RAHAQ_RS24550	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
RAHAQ_RS24670	COG4107	phosphonate C-P lyase system protein PhnK
RAHAQ_RS24795	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
RAHAQ_RS24810	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
RAHAQ_RS24940	COG0058	SHG alpha-glucan phosphorylase activity
RAHAQ_RS24945	COG0058	SHG alpha-glucan phosphorylase activity
RAHAQ_RS24950	COG0058	SHG alpha-glucan phosphorylase activity
RAHAQ_RS24960	COG1640	4-alpha-glucanotransferase
RAHAQ_RS25330	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RAHAQ_RS25470	COG0439	Biotin carboxylase
RAHAQ_RS25570	COG0747	negative chemotaxis
RAHAQ_RS25655	COG1215	transferase activity, transferring glycosyl groups
RAHAQ_RS25755	COG5301	cellulose 1,4-beta-cellobiosidase activity
RAHAQ_RS25790	COG3210	domain, Protein
RAHAQ_RS25830	COG0823	Involved in the tonB-independent uptake of proteins