locus-tag class description RPIC12D_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix RPIC12D_RS00005 PF11638 DnaA N-terminal domain RPIC12D_RS00005 PF00308 Bacterial dnaA protein RPIC12D_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain RPIC12D_RS00010 PF02767 DNA polymerase III beta subunit, central domain RPIC12D_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain RPIC12D_RS00015 PF01751 Toprim domain RPIC12D_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS00015 PF18053 DNA gyrase B subunit insert domain RPIC12D_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus RPIC12D_RS00015 PF00204 DNA gyrase B RPIC12D_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus RPIC12D_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS00025 PF01751 Toprim domain RPIC12D_RS00025 PF18053 DNA gyrase B subunit insert domain RPIC12D_RS00025 PF00204 DNA gyrase B RPIC12D_RS00035 PF00872 Transposase, Mutator family RPIC12D_RS00055 PF00392 Bacterial regulatory proteins, gntR family RPIC12D_RS00055 PF07729 FCD domain RPIC12D_RS00065 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS00070 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS00075 PF00005 ABC transporter RPIC12D_RS00080 PF01062 Bestrophin, RFP-TM, chloride channel RPIC12D_RS00095 PF13193 AMP-binding enzyme C-terminal domain RPIC12D_RS00095 PF00501 AMP-binding enzyme RPIC12D_RS00110 PF02627 Carboxymuconolactone decarboxylase family RPIC12D_RS00115 PF04542 Sigma-70 region 2 RPIC12D_RS00115 PF12680 SnoaL-like domain RPIC12D_RS00115 PF08281 Sigma-70, region 4 RPIC12D_RS00120 PF00072 Response regulator receiver domain RPIC12D_RS00120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS00120 PF13426 PAS domain RPIC12D_RS00130 PF00478 IMP dehydrogenase / GMP reductase domain RPIC12D_RS00130 PF00571 CBS domain RPIC12D_RS00140 PF06445 GyrI-like small molecule binding domain RPIC12D_RS00150 PF02772 S-adenosylmethionine synthetase, central domain RPIC12D_RS00150 PF02773 S-adenosylmethionine synthetase, C-terminal domain RPIC12D_RS00150 PF00438 S-adenosylmethionine synthetase, N-terminal domain RPIC12D_RS00160 PF03279 Bacterial lipid A biosynthesis acyltransferase RPIC12D_RS00165 PF01678 Diaminopimelate epimerase RPIC12D_RS00170 PF03976 Polyphosphate kinase 2 (PPK2) RPIC12D_RS00175 PF00156 Phosphoribosyl transferase domain RPIC12D_RS00180 PF03372 Endonuclease/Exonuclease/phosphatase family RPIC12D_RS00185 PF01118 Semialdehyde dehydrogenase, NAD binding domain RPIC12D_RS00195 PF02698 DUF218 domain RPIC12D_RS00210 PF00892 EamA-like transporter family RPIC12D_RS00220 PF07690 Major Facilitator Superfamily RPIC12D_RS00230 PF00106 short chain dehydrogenase RPIC12D_RS00240 PF00491 Arginase family RPIC12D_RS00245 PF00202 Aminotransferase class-III RPIC12D_RS00250 PF03466 LysR substrate binding domain RPIC12D_RS00250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS00260 PF13533 Biotin-lipoyl like RPIC12D_RS00265 PF00005 ABC transporter RPIC12D_RS00275 PF02321 Outer membrane efflux protein RPIC12D_RS00315 PF04717 Type VI secretion system, phage-baseplate injector RPIC12D_RS00320 PF08546 Ketopantoate reductase PanE/ApbA C terminal RPIC12D_RS00320 PF02558 Ketopantoate reductase PanE/ApbA RPIC12D_RS00325 PF01171 PP-loop family RPIC12D_RS00330 PF14602 Hexapeptide repeat of succinyl-transferase RPIC12D_RS00330 PF00132 Bacterial transferase hexapeptide (six repeats) RPIC12D_RS00330 PF12804 MobA-like NTP transferase domain RPIC12D_RS00335 PF01380 SIS domain RPIC12D_RS00355 PF08240 Alcohol dehydrogenase GroES-like domain RPIC12D_RS00355 PF00107 Zinc-binding dehydrogenase RPIC12D_RS00360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS00360 PF03466 LysR substrate binding domain RPIC12D_RS00365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPIC12D_RS00365 PF00205 Thiamine pyrophosphate enzyme, central domain RPIC12D_RS00365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPIC12D_RS00390 PF00155 Aminotransferase class I and II RPIC12D_RS00395 PF12833 Helix-turn-helix domain RPIC12D_RS00395 PF01965 DJ-1/PfpI family RPIC12D_RS00400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPIC12D_RS00410 PF07690 Major Facilitator Superfamily RPIC12D_RS00415 PF02798 Glutathione S-transferase, N-terminal domain RPIC12D_RS00415 PF00043 Glutathione S-transferase, C-terminal domain RPIC12D_RS00440 PF00872 Transposase, Mutator family RPIC12D_RS00460 PF00909 Ammonium Transporter Family RPIC12D_RS00470 PF01642 Methylmalonyl-CoA mutase RPIC12D_RS00470 PF02310 B12 binding domain RPIC12D_RS00475 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RPIC12D_RS00475 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS00480 PF02567 Phenazine biosynthesis-like protein RPIC12D_RS00495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS00495 PF03466 LysR substrate binding domain RPIC12D_RS00515 PF01965 DJ-1/PfpI family RPIC12D_RS00520 PF00561 alpha/beta hydrolase fold RPIC12D_RS00525 PF13640 2OG-Fe(II) oxygenase superfamily RPIC12D_RS00525 PF18331 PKHD-type hydroxylase C-terminal domain RPIC12D_RS00535 PF07715 TonB-dependent Receptor Plug Domain RPIC12D_RS00535 PF00593 TonB dependent receptor RPIC12D_RS00540 PF00378 Enoyl-CoA hydratase/isomerase RPIC12D_RS00550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC12D_RS00550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS00550 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC12D_RS00560 PF01039 Carboxyl transferase domain RPIC12D_RS00565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS00565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC12D_RS00565 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC12D_RS00570 PF00289 Biotin carboxylase, N-terminal domain RPIC12D_RS00570 PF02785 Biotin carboxylase C-terminal domain RPIC12D_RS00570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPIC12D_RS00570 PF00364 Biotin-requiring enzyme RPIC12D_RS00575 PF00501 AMP-binding enzyme RPIC12D_RS00575 PF13193 AMP-binding enzyme C-terminal domain RPIC12D_RS00600 PF00682 HMGL-like RPIC12D_RS00605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RPIC12D_RS00610 PF00289 Biotin carboxylase, N-terminal domain RPIC12D_RS00610 PF00364 Biotin-requiring enzyme RPIC12D_RS00610 PF02785 Biotin carboxylase C-terminal domain RPIC12D_RS00610 PF18140 Propionyl-coenzyme A carboxylase BT domain RPIC12D_RS00610 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPIC12D_RS00615 PF06968 Biotin and Thiamin Synthesis associated domain RPIC12D_RS00615 PF04055 Radical SAM superfamily RPIC12D_RS00620 PF00378 Enoyl-CoA hydratase/isomerase RPIC12D_RS00630 PF01039 Carboxyl transferase domain RPIC12D_RS00640 PF13419 Haloacid dehalogenase-like hydrolase RPIC12D_RS00650 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC12D_RS00650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC12D_RS00650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS00660 PF00108 Thiolase, N-terminal domain RPIC12D_RS00660 PF02803 Thiolase, C-terminal domain RPIC12D_RS00665 PF00484 Carbonic anhydrase RPIC12D_RS00670 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) RPIC12D_RS00675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS00675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC12D_RS00675 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC12D_RS00680 PF13411 MerR HTH family regulatory protein RPIC12D_RS00690 PF03992 Antibiotic biosynthesis monooxygenase RPIC12D_RS00700 PF00106 short chain dehydrogenase RPIC12D_RS00705 PF13462 Thioredoxin RPIC12D_RS00715 PF00750 tRNA synthetases class I (R) RPIC12D_RS00715 PF05746 DALR anticodon binding domain RPIC12D_RS00715 PF03485 Arginyl tRNA synthetase N terminal domain RPIC12D_RS00740 PF17200 Single Cache domain 2 RPIC12D_RS00740 PF07730 Histidine kinase RPIC12D_RS00750 PF00072 Response regulator receiver domain RPIC12D_RS00750 PF04397 LytTr DNA-binding domain RPIC12D_RS00755 PF00196 Bacterial regulatory proteins, luxR family RPIC12D_RS00755 PF00072 Response regulator receiver domain RPIC12D_RS00765 PF02574 Homocysteine S-methyltransferase RPIC12D_RS00765 PF00809 Pterin binding enzyme RPIC12D_RS00765 PF02965 Vitamin B12 dependent methionine synthase, activation domain RPIC12D_RS00765 PF02607 B12 binding domain RPIC12D_RS00765 PF02310 B12 binding domain RPIC12D_RS00770 PF02310 B12 binding domain RPIC12D_RS00770 PF02607 B12 binding domain RPIC12D_RS00770 PF02965 Vitamin B12 dependent methionine synthase, activation domain RPIC12D_RS00770 PF02574 Homocysteine S-methyltransferase RPIC12D_RS00770 PF00809 Pterin binding enzyme RPIC12D_RS00780 PF12091 Protein of unknown function (DUF3567) RPIC12D_RS00785 PF00561 alpha/beta hydrolase fold RPIC12D_RS00810 PF00296 Luciferase-like monooxygenase RPIC12D_RS00820 PF00378 Enoyl-CoA hydratase/isomerase RPIC12D_RS00835 PF00255 Glutathione peroxidase RPIC12D_RS00845 PF01467 Cytidylyltransferase-like RPIC12D_RS00855 PF03309 Type III pantothenate kinase RPIC12D_RS00860 PF02237 Biotin protein ligase C terminal domain RPIC12D_RS00860 PF03099 Biotin/lipoate A/B protein ligase family RPIC12D_RS00860 PF08279 HTH domain RPIC12D_RS00865 PF02405 Permease MlaE RPIC12D_RS00870 PF09383 NIL domain RPIC12D_RS00870 PF00005 ABC transporter RPIC12D_RS00890 PF07690 Major Facilitator Superfamily RPIC12D_RS00895 PF06276 Ferric iron reductase FhuF-like transporter RPIC12D_RS00895 PF04183 IucA / IucC family RPIC12D_RS00900 PF05506 Domain of unknown function (DUF756) RPIC12D_RS00900 PF04185 Phosphoesterase family RPIC12D_RS00910 PF04055 Radical SAM superfamily RPIC12D_RS00910 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RPIC12D_RS00915 PF03099 Biotin/lipoate A/B protein ligase family RPIC12D_RS00925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS00925 PF03466 LysR substrate binding domain RPIC12D_RS00930 PF04359 Protein of unknown function (DUF493) RPIC12D_RS00935 PF07943 Penicillin-binding protein 5, C-terminal domain RPIC12D_RS00935 PF00768 D-alanyl-D-alanine carboxypeptidase RPIC12D_RS00940 PF02129 X-Pro dipeptidyl-peptidase (S15 family) RPIC12D_RS00950 PF00375 Sodium:dicarboxylate symporter family RPIC12D_RS00955 PF02743 Cache domain RPIC12D_RS00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS00955 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS00960 PF02954 Bacterial regulatory protein, Fis family RPIC12D_RS00960 PF00072 Response regulator receiver domain RPIC12D_RS00960 PF00158 Sigma-54 interaction domain RPIC12D_RS00970 PF00578 AhpC/TSA family RPIC12D_RS00975 PF01661 Macro domain RPIC12D_RS00985 PF01810 LysE type translocator RPIC12D_RS00990 PF01078 Magnesium chelatase, subunit ChlI RPIC12D_RS00990 PF13335 Magnesium chelatase, subunit ChlI C-terminal RPIC12D_RS01000 PF02082 Transcriptional regulator RPIC12D_RS01020 PF00580 UvrD/REP helicase N-terminal domain RPIC12D_RS01020 PF13361 UvrD-like helicase C-terminal domain RPIC12D_RS01055 PF13335 Magnesium chelatase, subunit ChlI C-terminal RPIC12D_RS01055 PF01078 Magnesium chelatase, subunit ChlI RPIC12D_RS01065 PF04380 Membrane fusogenic activity RPIC12D_RS01075 PF00543 Nitrogen regulatory protein P-II RPIC12D_RS01080 PF00909 Ammonium Transporter Family RPIC12D_RS01090 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RPIC12D_RS01090 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RPIC12D_RS01100 PF00381 PTS HPr component phosphorylation site RPIC12D_RS01105 PF05524 PEP-utilising enzyme, N-terminal RPIC12D_RS01105 PF00391 PEP-utilising enzyme, mobile domain RPIC12D_RS01105 PF02896 PEP-utilising enzyme, TIM barrel domain RPIC12D_RS01115 PF00210 Ferritin-like domain RPIC12D_RS01120 PF00899 ThiF family RPIC12D_RS01125 PF03572 Peptidase family S41 RPIC12D_RS01125 PF13180 PDZ domain RPIC12D_RS01130 PF00300 Histidine phosphatase superfamily (branch 1) RPIC12D_RS01135 PF00581 Rhodanese-like domain RPIC12D_RS01140 PF00462 Glutaredoxin RPIC12D_RS01145 PF02556 Preprotein translocase subunit SecB RPIC12D_RS01150 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RPIC12D_RS01150 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RPIC12D_RS01155 PF00588 SpoU rRNA Methylase family RPIC12D_RS01160 PF00156 Phosphoribosyl transferase domain RPIC12D_RS01165 PF08241 Methyltransferase domain RPIC12D_RS01175 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RPIC12D_RS01175 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RPIC12D_RS01180 PF00115 Cytochrome C and Quinol oxidase polypeptide I RPIC12D_RS01185 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 RPIC12D_RS01195 PF00510 Cytochrome c oxidase subunit III RPIC12D_RS01215 PF02628 Cytochrome oxidase assembly protein RPIC12D_RS01220 PF01040 UbiA prenyltransferase family RPIC12D_RS01225 PF02630 SCO1/SenC RPIC12D_RS01230 PF00140 Sigma-70 factor, region 1.2 RPIC12D_RS01230 PF04545 Sigma-70, region 4 RPIC12D_RS01230 PF04542 Sigma-70 region 2 RPIC12D_RS01235 PF00990 Diguanylate cyclase, GGDEF domain RPIC12D_RS01235 PF00563 EAL domain RPIC12D_RS01235 PF03707 Bacterial signalling protein N terminal repeat RPIC12D_RS01245 PF02678 Pirin RPIC12D_RS01245 PF05726 Pirin C-terminal cupin domain RPIC12D_RS01250 PF02885 Glycosyl transferase family, helical bundle domain RPIC12D_RS01255 PF00872 Transposase, Mutator family RPIC12D_RS01260 PF00872 Transposase, Mutator family RPIC12D_RS01265 PF00872 Transposase, Mutator family RPIC12D_RS01270 PF00005 ABC transporter RPIC12D_RS01275 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS01285 PF03861 ANTAR domain RPIC12D_RS01285 PF08376 Nitrate and nitrite sensing RPIC12D_RS01290 PF01557 Fumarylacetoacetate (FAA) hydrolase family RPIC12D_RS01295 PF14497 Glutathione S-transferase, C-terminal domain RPIC12D_RS01295 PF02798 Glutathione S-transferase, N-terminal domain RPIC12D_RS01330 PF02881 SRP54-type protein, helical bundle domain RPIC12D_RS01330 PF00448 SRP54-type protein, GTPase domain RPIC12D_RS01335 PF05193 Peptidase M16 inactive domain RPIC12D_RS01335 PF00675 Insulinase (Peptidase family M16) RPIC12D_RS01340 PF05193 Peptidase M16 inactive domain RPIC12D_RS01350 PF01467 Cytidylyltransferase-like RPIC12D_RS01355 PF00037 4Fe-4S binding domain RPIC12D_RS01365 PF01195 Peptidyl-tRNA hydrolase RPIC12D_RS01370 PF14693 Ribosomal protein TL5, C-terminal domain RPIC12D_RS01370 PF01386 Ribosomal L25p family RPIC12D_RS01375 PF14572 Phosphoribosyl synthetase-associated domain RPIC12D_RS01375 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RPIC12D_RS01385 PF00288 GHMP kinases N terminal domain RPIC12D_RS01385 PF08544 GHMP kinases C terminal RPIC12D_RS01390 PF03550 Outer membrane lipoprotein LolB RPIC12D_RS01400 PF06827 Zinc finger found in FPG and IleRS RPIC12D_RS01400 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RPIC12D_RS01400 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RPIC12D_RS01410 PF14815 NUDIX domain RPIC12D_RS01410 PF00730 HhH-GPD superfamily base excision DNA repair protein RPIC12D_RS01410 PF00633 Helix-hairpin-helix motif RPIC12D_RS01420 PF03668 P-loop ATPase protein family RPIC12D_RS01430 PF02603 HPr Serine kinase N terminus RPIC12D_RS01430 PF07475 HPr Serine kinase C-terminal domain RPIC12D_RS01435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RPIC12D_RS01440 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RPIC12D_RS01445 PF00309 Sigma-54 factor, Activator interacting domain (AID) RPIC12D_RS01445 PF04552 Sigma-54, DNA binding domain RPIC12D_RS01445 PF04963 Sigma-54 factor, core binding domain RPIC12D_RS01450 PF00005 ABC transporter RPIC12D_RS01470 PF01380 SIS domain RPIC12D_RS01470 PF00571 CBS domain RPIC12D_RS01475 PF02080 TrkA-C domain RPIC12D_RS01475 PF00999 Sodium/hydrogen exchanger family RPIC12D_RS01475 PF02254 TrkA-N domain RPIC12D_RS01485 PF01965 DJ-1/PfpI family RPIC12D_RS01490 PF00156 Phosphoribosyl transferase domain RPIC12D_RS01495 PF01810 LysE type translocator RPIC12D_RS01505 PF17755 UvrA DNA-binding domain RPIC12D_RS01505 PF17760 UvrA interaction domain RPIC12D_RS01510 PF07690 Major Facilitator Superfamily RPIC12D_RS01515 PF00436 Single-strand binding protein family RPIC12D_RS01520 PF18698 Histidine kinase sensor domain RPIC12D_RS01520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS01520 PF00989 PAS fold RPIC12D_RS01520 PF00672 HAMP domain RPIC12D_RS01520 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS01525 PF00072 Response regulator receiver domain RPIC12D_RS01525 PF00486 Transcriptional regulatory protein, C terminal RPIC12D_RS01530 PF01292 Prokaryotic cytochrome b561 RPIC12D_RS01535 PF00174 Oxidoreductase molybdopterin binding domain RPIC12D_RS01545 PF17991 Thioredoxin like C-terminal domain RPIC12D_RS01545 PF02683 Cytochrome C biogenesis protein transmembrane region RPIC12D_RS01545 PF00578 AhpC/TSA family RPIC12D_RS01565 PF00109 Beta-ketoacyl synthase, N-terminal domain RPIC12D_RS01565 PF02801 Beta-ketoacyl synthase, C-terminal domain RPIC12D_RS01570 PF01522 Polysaccharide deacetylase RPIC12D_RS01575 PF03176 MMPL family RPIC12D_RS01590 PF07977 FabA-like domain RPIC12D_RS01625 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPIC12D_RS01640 PF07859 alpha/beta hydrolase fold RPIC12D_RS01650 PF01202 Shikimate kinase RPIC12D_RS01655 PF00501 AMP-binding enzyme RPIC12D_RS01655 PF13193 AMP-binding enzyme C-terminal domain RPIC12D_RS01685 PF14489 QueF-like protein RPIC12D_RS01685 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term RPIC12D_RS01690 PF00291 Pyridoxal-phosphate dependent enzyme RPIC12D_RS01690 PF00585 C-terminal regulatory domain of Threonine dehydratase RPIC12D_RS01695 PF17655 Inward rectifier potassium channel C-terminal domain RPIC12D_RS01695 PF07885 Ion channel RPIC12D_RS01700 PF07670 Nucleoside recognition RPIC12D_RS01705 PF09335 SNARE associated Golgi protein RPIC12D_RS01720 PF00005 ABC transporter RPIC12D_RS01720 PF06472 ABC transporter transmembrane region 2 RPIC12D_RS01730 PF01209 ubiE/COQ5 methyltransferase family RPIC12D_RS01745 PF03109 ABC1 family RPIC12D_RS01750 PF05724 Thiopurine S-methyltransferase (TPMT) RPIC12D_RS01755 PF00474 Sodium:solute symporter family RPIC12D_RS01770 PF01336 OB-fold nucleic acid binding domain RPIC12D_RS01770 PF00152 tRNA synthetases class II (D, K and N) RPIC12D_RS01770 PF02938 GAD domain RPIC12D_RS01780 PF00293 NUDIX domain RPIC12D_RS01785 PF03372 Endonuclease/Exonuclease/phosphatase family RPIC12D_RS01790 PF13091 PLD-like domain RPIC12D_RS01795 PF01144 Coenzyme A transferase RPIC12D_RS01805 PF12806 Acetyl-CoA dehydrogenase C-terminal like RPIC12D_RS01805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS01805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC12D_RS01805 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC12D_RS01810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RPIC12D_RS01810 PF00378 Enoyl-CoA hydratase/isomerase RPIC12D_RS01810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS01815 PF00108 Thiolase, N-terminal domain RPIC12D_RS01815 PF02803 Thiolase, C-terminal domain RPIC12D_RS01825 PF00378 Enoyl-CoA hydratase/isomerase RPIC12D_RS01830 PF03061 Thioesterase superfamily RPIC12D_RS01835 PF00005 ABC transporter RPIC12D_RS01835 PF00664 ABC transporter transmembrane region RPIC12D_RS01845 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RPIC12D_RS01845 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RPIC12D_RS01850 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC12D_RS01855 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS01860 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS01865 PF00005 ABC transporter RPIC12D_RS01870 PF13230 Glutamine amidotransferases class-II RPIC12D_RS01875 PF05161 MOFRL family RPIC12D_RS01875 PF13660 Domain of unknown function (DUF4147) RPIC12D_RS01880 PF01979 Amidohydrolase family RPIC12D_RS01895 PF00572 Ribosomal protein L13 RPIC12D_RS01900 PF00380 Ribosomal protein S9/S16 RPIC12D_RS01915 PF01521 Iron-sulphur cluster biosynthesis RPIC12D_RS01920 PF03702 Anhydro-N-acetylmuramic acid kinase RPIC12D_RS01925 PF01479 S4 domain RPIC12D_RS01925 PF00579 tRNA synthetases class I (W and Y) RPIC12D_RS01930 PF02580 D-Tyr-tRNA(Tyr) deacylase RPIC12D_RS01935 PF00300 Histidine phosphatase superfamily (branch 1) RPIC12D_RS01945 PF17864 RuvB AAA lid domain RPIC12D_RS01945 PF05496 Holliday junction DNA helicase RuvB P-loop domain RPIC12D_RS01945 PF05491 RuvB C-terminal winged helix domain RPIC12D_RS01950 PF01330 RuvA N terminal domain RPIC12D_RS01950 PF07499 RuvA, C-terminal domain RPIC12D_RS01955 PF03009 Glycerophosphoryl diester phosphodiesterase family RPIC12D_RS01960 PF02075 Crossover junction endodeoxyribonuclease RuvC RPIC12D_RS01965 PF02142 MGS-like domain RPIC12D_RS01965 PF01808 AICARFT/IMPCHase bienzyme RPIC12D_RS01970 PF02954 Bacterial regulatory protein, Fis family RPIC12D_RS01975 PF01207 Dihydrouridine synthase (Dus) RPIC12D_RS01980 PF01266 FAD dependent oxidoreductase RPIC12D_RS01985 PF01494 FAD binding domain RPIC12D_RS01990 PF05195 Aminopeptidase P, N-terminal domain RPIC12D_RS01990 PF00557 Metallopeptidase family M24 RPIC12D_RS01995 PF00990 Diguanylate cyclase, GGDEF domain RPIC12D_RS01995 PF00563 EAL domain RPIC12D_RS01995 PF03707 Bacterial signalling protein N terminal repeat RPIC12D_RS02000 PF00483 Nucleotidyl transferase RPIC12D_RS02015 PF01636 Phosphotransferase enzyme family RPIC12D_RS02020 PF04453 LPS transport system D RPIC12D_RS02025 PF09312 SurA N-terminal domain RPIC12D_RS02030 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RPIC12D_RS02035 PF00398 Ribosomal RNA adenine dimethylase RPIC12D_RS02045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPIC12D_RS02055 PF01553 Acyltransferase RPIC12D_RS02065 PF05746 DALR anticodon binding domain RPIC12D_RS02065 PF02092 Glycyl-tRNA synthetase beta subunit RPIC12D_RS02075 PF02091 Glycyl-tRNA synthetase alpha subunit RPIC12D_RS02080 PF00795 Carbon-nitrogen hydrolase RPIC12D_RS02085 PF03471 Transporter associated domain RPIC12D_RS02085 PF00571 CBS domain RPIC12D_RS02105 PF02130 Uncharacterized protein family UPF0054 RPIC12D_RS02110 PF02562 PhoH-like protein RPIC12D_RS02115 PF04055 Radical SAM superfamily RPIC12D_RS02115 PF00919 Uncharacterized protein family UPF0004 RPIC12D_RS02115 PF01938 TRAM domain RPIC12D_RS02140 PF00501 AMP-binding enzyme RPIC12D_RS02140 PF13193 AMP-binding enzyme C-terminal domain RPIC12D_RS02145 PF02803 Thiolase, C-terminal domain RPIC12D_RS02145 PF00108 Thiolase, N-terminal domain RPIC12D_RS02160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC12D_RS02160 PF09317 Domain of unknown function (DUF1974) RPIC12D_RS02160 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC12D_RS02160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS02165 PF00440 Bacterial regulatory proteins, tetR family RPIC12D_RS02170 PF00271 Helicase conserved C-terminal domain RPIC12D_RS02170 PF00270 DEAD/DEAH box helicase RPIC12D_RS02175 PF01636 Phosphotransferase enzyme family RPIC12D_RS02180 PF05726 Pirin C-terminal cupin domain RPIC12D_RS02180 PF02678 Pirin RPIC12D_RS02185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS02185 PF03466 LysR substrate binding domain RPIC12D_RS02190 PF00072 Response regulator receiver domain RPIC12D_RS02190 PF00486 Transcriptional regulatory protein, C terminal RPIC12D_RS02200 PF01494 FAD binding domain RPIC12D_RS02205 PF03466 LysR substrate binding domain RPIC12D_RS02205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS02210 PF07690 Major Facilitator Superfamily RPIC12D_RS02215 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RPIC12D_RS02225 PF00743 Flavin-binding monooxygenase-like RPIC12D_RS02230 PF12697 Alpha/beta hydrolase family RPIC12D_RS02240 PF00083 Sugar (and other) transporter RPIC12D_RS02240 PF08946 Osmosensory transporter coiled coil RPIC12D_RS02245 PF04341 Protein of unknown function, DUF485 RPIC12D_RS02250 PF00474 Sodium:solute symporter family RPIC12D_RS02270 PF08521 Two-component sensor kinase N-terminal RPIC12D_RS02270 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS02270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS02275 PF00072 Response regulator receiver domain RPIC12D_RS02275 PF00486 Transcriptional regulatory protein, C terminal RPIC12D_RS02280 PF00154 recA bacterial DNA recombination protein RPIC12D_RS02285 PF02631 RecX family RPIC12D_RS02295 PF08442 ATP-grasp domain RPIC12D_RS02295 PF00549 CoA-ligase RPIC12D_RS02300 PF02629 CoA binding domain RPIC12D_RS02300 PF00549 CoA-ligase RPIC12D_RS02305 PF03741 Integral membrane protein TerC family RPIC12D_RS02310 PF07963 Prokaryotic N-terminal methylation motif RPIC12D_RS02310 PF00114 Pilin (bacterial filament) RPIC12D_RS02315 PF00114 Pilin (bacterial filament) RPIC12D_RS02315 PF07963 Prokaryotic N-terminal methylation motif RPIC12D_RS02325 PF11846 Virulence factor membrane-bound polymerase, C-terminal RPIC12D_RS02325 PF04932 O-Antigen ligase RPIC12D_RS02325 PF15864 Protein glycosylation ligase RPIC12D_RS02330 PF00114 Pilin (bacterial filament) RPIC12D_RS02330 PF07963 Prokaryotic N-terminal methylation motif RPIC12D_RS02335 PF01967 MoaC family RPIC12D_RS02340 PF01435 Peptidase family M48 RPIC12D_RS02340 PF07720 Tetratricopeptide repeat RPIC12D_RS02350 PF00561 alpha/beta hydrolase fold RPIC12D_RS02360 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RPIC12D_RS02380 PF00892 EamA-like transporter family RPIC12D_RS02385 PF00162 Phosphoglycerate kinase RPIC12D_RS02390 PF00224 Pyruvate kinase, barrel domain RPIC12D_RS02390 PF02887 Pyruvate kinase, alpha/beta domain RPIC12D_RS02395 PF01116 Fructose-bisphosphate aldolase class-II RPIC12D_RS02400 PF01259 SAICAR synthetase RPIC12D_RS02405 PF00731 AIR carboxylase RPIC12D_RS02410 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RPIC12D_RS02410 PF02222 ATP-grasp domain RPIC12D_RS02415 PF01300 Telomere recombination RPIC12D_RS02415 PF03481 Putative GTP-binding controlling metal-binding RPIC12D_RS02420 PF03797 Autotransporter beta-domain RPIC12D_RS02420 PF00657 GDSL-like Lipase/Acylhydrolase RPIC12D_RS02425 PF03205 Molybdopterin guanine dinucleotide synthesis protein B RPIC12D_RS02430 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RPIC12D_RS02435 PF01068 ATP dependent DNA ligase domain RPIC12D_RS02435 PF13298 DNA polymerase Ligase (LigD) RPIC12D_RS02435 PF04679 ATP dependent DNA ligase C terminal region RPIC12D_RS02440 PF02735 Ku70/Ku80 beta-barrel domain RPIC12D_RS02445 PF07690 Major Facilitator Superfamily RPIC12D_RS02465 PF13382 Adenine deaminase C-terminal domain RPIC12D_RS02465 PF01979 Amidohydrolase family RPIC12D_RS02470 PF03707 Bacterial signalling protein N terminal repeat RPIC12D_RS02470 PF00990 Diguanylate cyclase, GGDEF domain RPIC12D_RS02470 PF00563 EAL domain RPIC12D_RS02475 PF17200 Single Cache domain 2 RPIC12D_RS02475 PF00672 HAMP domain RPIC12D_RS02475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC12D_RS02480 PF07690 Major Facilitator Superfamily RPIC12D_RS02485 PF01425 Amidase RPIC12D_RS02495 PF00392 Bacterial regulatory proteins, gntR family RPIC12D_RS02495 PF07729 FCD domain RPIC12D_RS02500 PF01494 FAD binding domain RPIC12D_RS02505 PF13458 Periplasmic binding protein RPIC12D_RS02520 PF01966 HD domain RPIC12D_RS02520 PF11871 Domain of unknown function (DUF3391) RPIC12D_RS02565 PF00392 Bacterial regulatory proteins, gntR family RPIC12D_RS02565 PF00155 Aminotransferase class I and II RPIC12D_RS02575 PF02470 MlaD protein RPIC12D_RS02580 PF04403 Paraquat-inducible protein A RPIC12D_RS02585 PF04403 Paraquat-inducible protein A RPIC12D_RS02595 PF00756 Putative esterase RPIC12D_RS02600 PF00107 Zinc-binding dehydrogenase RPIC12D_RS02600 PF08240 Alcohol dehydrogenase GroES-like domain RPIC12D_RS02605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC12D_RS02605 PF02203 Tar ligand binding domain homologue RPIC12D_RS02605 PF00672 HAMP domain RPIC12D_RS02610 PF13417 Glutathione S-transferase, N-terminal domain RPIC12D_RS02615 PF00990 Diguanylate cyclase, GGDEF domain RPIC12D_RS02620 PF03992 Antibiotic biosynthesis monooxygenase RPIC12D_RS02630 PF03435 Saccharopine dehydrogenase NADP binding domain RPIC12D_RS02635 PF00463 Isocitrate lyase family RPIC12D_RS02640 PF07690 Major Facilitator Superfamily RPIC12D_RS02650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS02650 PF03466 LysR substrate binding domain RPIC12D_RS02655 PF00563 EAL domain RPIC12D_RS02655 PF00990 Diguanylate cyclase, GGDEF domain RPIC12D_RS02655 PF00360 Phytochrome region RPIC12D_RS02655 PF01590 GAF domain RPIC12D_RS02660 PF00166 Chaperonin 10 Kd subunit RPIC12D_RS02665 PF00118 TCP-1/cpn60 chaperonin family RPIC12D_RS02670 PF05987 Bacterial protein of unknown function (DUF898) RPIC12D_RS02685 PF00535 Glycosyl transferase family 2 RPIC12D_RS02715 PF00437 Type II/IV secretion system protein RPIC12D_RS02730 PF04972 BON domain RPIC12D_RS02730 PF00263 Bacterial type II and III secretion system protein RPIC12D_RS02730 PF13629 Pilus formation protein N terminal region RPIC12D_RS02765 PF04011 LemA family RPIC12D_RS02775 PF00701 Dihydrodipicolinate synthetase family RPIC12D_RS02780 PF00202 Aminotransferase class-III RPIC12D_RS02785 PF00301 Rubredoxin RPIC12D_RS02790 PF00072 Response regulator receiver domain RPIC12D_RS02795 PF00072 Response regulator receiver domain RPIC12D_RS02805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC12D_RS02805 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term RPIC12D_RS02810 PF01627 Hpt domain RPIC12D_RS02810 PF02895 Signal transducing histidine kinase, homodimeric domain RPIC12D_RS02810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS02810 PF01584 CheW-like domain RPIC12D_RS02810 PF00072 Response regulator receiver domain RPIC12D_RS02815 PF00875 DNA photolyase RPIC12D_RS02815 PF03441 FAD binding domain of DNA photolyase RPIC12D_RS02820 PF01479 S4 domain RPIC12D_RS02820 PF00849 RNA pseudouridylate synthase RPIC12D_RS02825 PF02622 Uncharacterized ACR, COG1678 RPIC12D_RS02830 PF03652 Holliday junction resolvase RPIC12D_RS02835 PF00156 Phosphoribosyl transferase domain RPIC12D_RS02840 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RPIC12D_RS02840 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RPIC12D_RS02845 PF01979 Amidohydrolase family RPIC12D_RS02850 PF01553 Acyltransferase RPIC12D_RS02855 PF00149 Calcineurin-like phosphoesterase RPIC12D_RS02860 PF16363 GDP-mannose 4,6 dehydratase RPIC12D_RS02865 PF04321 RmlD substrate binding domain RPIC12D_RS02870 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RPIC12D_RS02875 PF02719 Polysaccharide biosynthesis protein RPIC12D_RS02880 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RPIC12D_RS02880 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RPIC12D_RS02880 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RPIC12D_RS02885 PF01370 NAD dependent epimerase/dehydratase family RPIC12D_RS02890 PF02719 Polysaccharide biosynthesis protein RPIC12D_RS02895 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RPIC12D_RS02905 PF02348 Cytidylyltransferase RPIC12D_RS02910 PF00202 Aminotransferase class-III RPIC12D_RS02925 PF08666 SAF domain RPIC12D_RS02925 PF03102 NeuB family RPIC12D_RS02945 PF00132 Bacterial transferase hexapeptide (six repeats) RPIC12D_RS02960 PF00132 Bacterial transferase hexapeptide (six repeats) RPIC12D_RS02965 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RPIC12D_RS02970 PF02397 Bacterial sugar transferase RPIC12D_RS02985 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RPIC12D_RS02985 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RPIC12D_RS02985 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RPIC12D_RS02985 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RPIC12D_RS02990 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RPIC12D_RS02995 PF00534 Glycosyl transferases group 1 RPIC12D_RS02995 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RPIC12D_RS03005 PF02321 Outer membrane efflux protein RPIC12D_RS03010 PF00581 Rhodanese-like domain RPIC12D_RS03010 PF00899 ThiF family RPIC12D_RS03020 PF00440 Bacterial regulatory proteins, tetR family RPIC12D_RS03020 PF08361 MAATS-type transcriptional repressor, C-terminal region RPIC12D_RS03035 PF02673 Bacitracin resistance protein BacA RPIC12D_RS03040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RPIC12D_RS03045 PF02390 Putative methyltransferase RPIC12D_RS03050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS03050 PF03466 LysR substrate binding domain RPIC12D_RS03055 PF13180 PDZ domain RPIC12D_RS03055 PF17820 PDZ domain RPIC12D_RS03060 PF01435 Peptidase family M48 RPIC12D_RS03070 PF02254 TrkA-N domain RPIC12D_RS03070 PF02080 TrkA-C domain RPIC12D_RS03070 PF00999 Sodium/hydrogen exchanger family RPIC12D_RS03075 PF00085 Thioredoxin RPIC12D_RS03105 PF17862 AAA+ lid domain RPIC12D_RS03105 PF00004 ATPase family associated with various cellular activities (AAA) RPIC12D_RS03105 PF01434 Peptidase family M41 RPIC12D_RS03110 PF13091 PLD-like domain RPIC12D_RS03115 PF02861 Clp amino terminal domain, pathogenicity island component RPIC12D_RS03115 PF00004 ATPase family associated with various cellular activities (AAA) RPIC12D_RS03115 PF07724 AAA domain (Cdc48 subfamily) RPIC12D_RS03115 PF17871 AAA lid domain RPIC12D_RS03115 PF10431 C-terminal, D2-small domain, of ClpB protein RPIC12D_RS03120 PF01527 Transposase RPIC12D_RS03125 PF00665 Integrase core domain RPIC12D_RS03125 PF13276 HTH-like domain RPIC12D_RS03125 PF13333 Integrase core domain RPIC12D_RS03130 PF17871 AAA lid domain RPIC12D_RS03130 PF00004 ATPase family associated with various cellular activities (AAA) RPIC12D_RS03130 PF07724 AAA domain (Cdc48 subfamily) RPIC12D_RS03130 PF10431 C-terminal, D2-small domain, of ClpB protein RPIC12D_RS03130 PF02861 Clp amino terminal domain, pathogenicity island component RPIC12D_RS03135 PF00011 Hsp20/alpha crystallin family RPIC12D_RS03140 PF12728 Helix-turn-helix domain RPIC12D_RS03145 PF01548 Transposase RPIC12D_RS03145 PF02371 Transposase IS116/IS110/IS902 family RPIC12D_RS03150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS03150 PF03466 LysR substrate binding domain RPIC12D_RS03165 PF13614 AAA domain RPIC12D_RS03205 PF01751 Toprim domain RPIC12D_RS03205 PF01131 DNA topoisomerase RPIC12D_RS03210 PF13700 Domain of unknown function (DUF4158) RPIC12D_RS03210 PF01526 Tn3 transposase DDE domain RPIC12D_RS03220 PF03358 NADPH-dependent FMN reductase RPIC12D_RS03225 PF03960 ArsC family RPIC12D_RS03235 PF01758 Sodium Bile acid symporter family RPIC12D_RS03240 PF02374 Anion-transporting ATPase RPIC12D_RS03245 PF06953 Arsenical resistance operon trans-acting repressor ArsD RPIC12D_RS03310 PF06067 Domain of unknown function (DUF932) RPIC12D_RS03415 PF04002 RadC-like JAB domain RPIC12D_RS03450 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system RPIC12D_RS03475 PF00589 Phage integrase family RPIC12D_RS03475 PF14659 Phage integrase, N-terminal SAM-like domain RPIC12D_RS03475 PF13356 Arm DNA-binding domain RPIC12D_RS03490 PF00501 AMP-binding enzyme RPIC12D_RS03490 PF13193 AMP-binding enzyme C-terminal domain RPIC12D_RS03495 PF00171 Aldehyde dehydrogenase family RPIC12D_RS03500 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RPIC12D_RS03505 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain RPIC12D_RS03505 PF01464 Transglycosylase SLT domain RPIC12D_RS03510 PF00155 Aminotransferase class I and II RPIC12D_RS03515 PF01029 NusB family RPIC12D_RS03520 PF00885 6,7-dimethyl-8-ribityllumazine synthase RPIC12D_RS03525 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RPIC12D_RS03525 PF00925 GTP cyclohydrolase II RPIC12D_RS03530 PF00677 Lumazine binding domain RPIC12D_RS03535 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RPIC12D_RS03535 PF01872 RibD C-terminal domain RPIC12D_RS03580 PF05567 Neisseria PilC beta-propeller domain RPIC12D_RS03590 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor RPIC12D_RS03590 PF07963 Prokaryotic N-terminal methylation motif RPIC12D_RS03595 PF00872 Transposase, Mutator family RPIC12D_RS03600 PF03477 ATP cone domain RPIC12D_RS03605 PF00464 Serine hydroxymethyltransferase RPIC12D_RS03610 PF00106 short chain dehydrogenase RPIC12D_RS03615 PF03061 Thioesterase superfamily RPIC12D_RS03620 PF01618 MotA/TolQ/ExbB proton channel family RPIC12D_RS03625 PF02472 Biopolymer transport protein ExbD/TolR RPIC12D_RS03635 PF04052 TolB amino-terminal domain RPIC12D_RS03635 PF07676 WD40-like Beta Propeller Repeat RPIC12D_RS03640 PF00691 OmpA family RPIC12D_RS03650 PF06508 Queuosine biosynthesis protein QueC RPIC12D_RS03655 PF04143 Sulphur transport RPIC12D_RS03695 PF01527 Transposase RPIC12D_RS03700 PF13276 HTH-like domain RPIC12D_RS03700 PF00665 Integrase core domain RPIC12D_RS03700 PF13333 Integrase core domain RPIC12D_RS03770 PF00294 pfkB family carbohydrate kinase RPIC12D_RS03775 PF07690 Major Facilitator Superfamily RPIC12D_RS03780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RPIC12D_RS03780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RPIC12D_RS03785 PF00356 Bacterial regulatory proteins, lacI family RPIC12D_RS03795 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS03795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC12D_RS03800 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RPIC12D_RS03805 PF00293 NUDIX domain RPIC12D_RS03810 PF03649 Uncharacterised protein family (UPF0014) RPIC12D_RS03815 PF00005 ABC transporter RPIC12D_RS03835 PF05957 Bacterial protein of unknown function (DUF883) RPIC12D_RS03840 PF10417 C-terminal domain of 1-Cys peroxiredoxin RPIC12D_RS03840 PF00578 AhpC/TSA family RPIC12D_RS03845 PF00860 Permease family RPIC12D_RS03850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS03850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC12D_RS03850 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC12D_RS03855 PF09339 IclR helix-turn-helix domain RPIC12D_RS03860 PF03301 Tryptophan 2,3-dioxygenase RPIC12D_RS03865 PF00266 Aminotransferase class-V RPIC12D_RS03870 PF04199 Putative cyclase RPIC12D_RS03875 PF01037 Lrp/AsnC ligand binding domain RPIC12D_RS03885 PF01613 Flavin reductase like domain RPIC12D_RS03905 PF01625 Peptide methionine sulfoxide reductase RPIC12D_RS03920 PF01243 Pyridoxamine 5'-phosphate oxidase RPIC12D_RS03920 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RPIC12D_RS03925 PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase RPIC12D_RS03930 PF05199 GMC oxidoreductase RPIC12D_RS03930 PF00732 GMC oxidoreductase RPIC12D_RS03935 PF00034 Cytochrome c RPIC12D_RS03935 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPIC12D_RS03940 PF05170 AsmA family RPIC12D_RS03945 PF00899 ThiF family RPIC12D_RS03955 PF01814 Hemerythrin HHE cation binding domain RPIC12D_RS03965 PF00085 Thioredoxin RPIC12D_RS03970 PF13193 AMP-binding enzyme C-terminal domain RPIC12D_RS03970 PF00501 AMP-binding enzyme RPIC12D_RS03980 PF04752 ChaC-like protein RPIC12D_RS03990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RPIC12D_RS03995 PF07152 YaeQ protein RPIC12D_RS04020 PF04264 YceI-like domain RPIC12D_RS04025 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RPIC12D_RS04025 PF00749 tRNA synthetases class I (E and Q), catalytic domain RPIC12D_RS04030 PF03280 Proteobacterial lipase chaperone protein RPIC12D_RS04035 PF00561 alpha/beta hydrolase fold RPIC12D_RS04040 PF01970 Tripartite tricarboxylate transporter TctA family RPIC12D_RS04055 PF02515 CoA-transferase family III RPIC12D_RS04060 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RPIC12D_RS04060 PF02272 DHHA1 domain RPIC12D_RS04060 PF01411 tRNA synthetases class II (A) RPIC12D_RS04075 PF07715 TonB-dependent Receptor Plug Domain RPIC12D_RS04075 PF00593 TonB dependent receptor RPIC12D_RS04080 PF01145 SPFH domain / Band 7 family RPIC12D_RS04090 PF03466 LysR substrate binding domain RPIC12D_RS04090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS04095 PF06779 Uncharacterised MFS-type transporter YbfB RPIC12D_RS04100 PF00596 Class II Aldolase and Adducin N-terminal domain RPIC12D_RS04105 PF01361 Tautomerase enzyme RPIC12D_RS04110 PF01212 Beta-eliminating lyase RPIC12D_RS04115 PF00293 NUDIX domain RPIC12D_RS04115 PF13344 Haloacid dehalogenase-like hydrolase RPIC12D_RS04120 PF01206 Sulfurtransferase TusA RPIC12D_RS04125 PF01810 LysE type translocator RPIC12D_RS04135 PF00072 Response regulator receiver domain RPIC12D_RS04135 PF09308 LuxQ, periplasmic RPIC12D_RS04135 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS04145 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RPIC12D_RS04145 PF02753 Pili assembly chaperone PapD, C-terminal domain RPIC12D_RS04150 PF13953 PapC C-terminal domain RPIC12D_RS04150 PF13954 PapC N-terminal domain RPIC12D_RS04150 PF00577 Outer membrane usher protein RPIC12D_RS04155 PF03050 Transposase IS66 family RPIC12D_RS04155 PF13817 IS66 C-terminal element RPIC12D_RS04155 PF13007 Transposase C of IS166 homeodomain RPIC12D_RS04155 PF13005 zinc-finger binding domain of transposase IS66 RPIC12D_RS04180 PF13419 Haloacid dehalogenase-like hydrolase RPIC12D_RS04195 PF00691 OmpA family RPIC12D_RS04200 PF03989 DNA gyrase C-terminal domain, beta-propeller RPIC12D_RS04200 PF00521 DNA gyrase/topoisomerase IV, subunit A RPIC12D_RS04210 PF00266 Aminotransferase class-V RPIC12D_RS04215 PF01817 Chorismate mutase type II RPIC12D_RS04215 PF00800 Prephenate dehydratase RPIC12D_RS04215 PF01842 ACT domain RPIC12D_RS04220 PF00155 Aminotransferase class I and II RPIC12D_RS04225 PF01842 ACT domain RPIC12D_RS04225 PF02153 Prephenate dehydrogenase RPIC12D_RS04230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RPIC12D_RS04235 PF02224 Cytidylate kinase RPIC12D_RS04240 PF00575 S1 RNA binding domain RPIC12D_RS04245 PF00216 Bacterial DNA-binding protein RPIC12D_RS04255 PF18073 Rubredoxin metal binding domain RPIC12D_RS04260 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RPIC12D_RS04260 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RPIC12D_RS04260 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RPIC12D_RS04265 PF00294 pfkB family carbohydrate kinase RPIC12D_RS04270 PF01370 NAD dependent epimerase/dehydratase family RPIC12D_RS04280 PF00291 Pyridoxal-phosphate dependent enzyme RPIC12D_RS04285 PF13406 Transglycosylase SLT domain RPIC12D_RS04290 PF00850 Histone deacetylase domain RPIC12D_RS04295 PF00005 ABC transporter RPIC12D_RS04295 PF09383 NIL domain RPIC12D_RS04300 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS04305 PF03180 NLPA lipoprotein RPIC12D_RS04310 PF01012 Electron transfer flavoprotein domain RPIC12D_RS04315 PF00766 Electron transfer flavoprotein FAD-binding domain RPIC12D_RS04315 PF01012 Electron transfer flavoprotein domain RPIC12D_RS04320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC12D_RS04320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS04320 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC12D_RS04320 PF12806 Acetyl-CoA dehydrogenase C-terminal like RPIC12D_RS04325 PF01266 FAD dependent oxidoreductase RPIC12D_RS04330 PF01037 Lrp/AsnC ligand binding domain RPIC12D_RS04340 PF04055 Radical SAM superfamily RPIC12D_RS04360 PF07995 Glucose / Sorbosone dehydrogenase RPIC12D_RS04365 PF00886 Ribosomal protein S16 RPIC12D_RS04370 PF01782 RimM N-terminal domain RPIC12D_RS04370 PF05239 PRC-barrel domain RPIC12D_RS04375 PF01746 tRNA (Guanine-1)-methyltransferase RPIC12D_RS04380 PF01245 Ribosomal protein L19 RPIC12D_RS04385 PF00293 NUDIX domain RPIC12D_RS04390 PF03186 CobD/Cbib protein RPIC12D_RS04390 PF17113 Regulatory signalling modulator protein AmpE RPIC12D_RS04400 PF03193 RsgA GTPase RPIC12D_RS04405 PF01435 Peptidase family M48 RPIC12D_RS04410 PF00929 Exonuclease RPIC12D_RS04415 PF00994 Probable molybdopterin binding domain RPIC12D_RS04420 PF04751 Protein of unknown function (DUF615) RPIC12D_RS04425 PF01523 Putative modulator of DNA gyrase RPIC12D_RS04430 PF00186 Dihydrofolate reductase RPIC12D_RS04435 PF00303 Thymidylate synthase RPIC12D_RS04440 PF00291 Pyridoxal-phosphate dependent enzyme RPIC12D_RS04445 PF03741 Integral membrane protein TerC family RPIC12D_RS04450 PF10017 Histidine-specific methyltransferase, SAM-dependent RPIC12D_RS04455 PF03781 Sulfatase-modifying factor enzyme 1 RPIC12D_RS04455 PF12867 DinB superfamily RPIC12D_RS04460 PF00271 Helicase conserved C-terminal domain RPIC12D_RS04460 PF00270 DEAD/DEAH box helicase RPIC12D_RS04480 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC12D_RS04490 PF00005 ABC transporter RPIC12D_RS04490 PF16326 ABC transporter C-terminal domain RPIC12D_RS04490 PF12848 ABC transporter RPIC12D_RS04495 PF01751 Toprim domain RPIC12D_RS04495 PF00986 DNA gyrase B subunit, carboxyl terminus RPIC12D_RS04495 PF00204 DNA gyrase B RPIC12D_RS04495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS04500 PF01464 Transglycosylase SLT domain RPIC12D_RS04505 PF00521 DNA gyrase/topoisomerase IV, subunit A RPIC12D_RS04520 PF00324 Amino acid permease RPIC12D_RS04525 PF07690 Major Facilitator Superfamily RPIC12D_RS04530 PF00005 ABC transporter RPIC12D_RS04530 PF00664 ABC transporter transmembrane region RPIC12D_RS04535 PF02652 L-lactate permease RPIC12D_RS04545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RPIC12D_RS04545 PF00529 HlyD membrane-fusion protein of T1SS RPIC12D_RS04550 PF00873 AcrB/AcrD/AcrF family RPIC12D_RS04565 PF13417 Glutathione S-transferase, N-terminal domain RPIC12D_RS04565 PF00043 Glutathione S-transferase, C-terminal domain RPIC12D_RS04570 PF00155 Aminotransferase class I and II RPIC12D_RS04580 PF00892 EamA-like transporter family RPIC12D_RS04585 PF02272 DHHA1 domain RPIC12D_RS04585 PF01411 tRNA synthetases class II (A) RPIC12D_RS04585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RPIC12D_RS04590 PF00155 Aminotransferase class I and II RPIC12D_RS04590 PF00392 Bacterial regulatory proteins, gntR family RPIC12D_RS04595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS04595 PF00183 Hsp90 protein RPIC12D_RS04605 PF02743 Cache domain RPIC12D_RS04605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC12D_RS04605 PF00672 HAMP domain RPIC12D_RS04635 PF13302 Acetyltransferase (GNAT) domain RPIC12D_RS04640 PF17862 AAA+ lid domain RPIC12D_RS04640 PF00004 ATPase family associated with various cellular activities (AAA) RPIC12D_RS04640 PF01434 Peptidase family M41 RPIC12D_RS04645 PF00034 Cytochrome c RPIC12D_RS04650 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPIC12D_RS04670 PF00881 Nitroreductase family RPIC12D_RS04675 PF00730 HhH-GPD superfamily base excision DNA repair protein RPIC12D_RS04675 PF00633 Helix-hairpin-helix motif RPIC12D_RS04675 PF10576 Iron-sulfur binding domain of endonuclease III RPIC12D_RS04680 PF04060 Putative Fe-S cluster RPIC12D_RS04685 PF00440 Bacterial regulatory proteins, tetR family RPIC12D_RS04685 PF17938 Tetracyclin repressor-like, C-terminal domain RPIC12D_RS04695 PF00155 Aminotransferase class I and II RPIC12D_RS04700 PF04851 Type III restriction enzyme, res subunit RPIC12D_RS04700 PF02151 UvrB/uvrC motif RPIC12D_RS04700 PF12344 Ultra-violet resistance protein B RPIC12D_RS04700 PF00271 Helicase conserved C-terminal domain RPIC12D_RS04700 PF17757 UvrB interaction domain RPIC12D_RS04710 PF00294 pfkB family carbohydrate kinase RPIC12D_RS04715 PF00356 Bacterial regulatory proteins, lacI family RPIC12D_RS04720 PF02653 Branched-chain amino acid transport system / permease component RPIC12D_RS04725 PF00005 ABC transporter RPIC12D_RS04730 PF13407 Periplasmic binding protein domain RPIC12D_RS04735 PF02082 Transcriptional regulator RPIC12D_RS04740 PF00266 Aminotransferase class-V RPIC12D_RS04745 PF01592 NifU-like N terminal domain RPIC12D_RS04750 PF01521 Iron-sulphur cluster biosynthesis RPIC12D_RS04760 PF00226 DnaJ domain RPIC12D_RS04760 PF07743 HSCB C-terminal oligomerisation domain RPIC12D_RS04765 PF00012 Hsp70 protein RPIC12D_RS04770 PF00111 2Fe-2S iron-sulfur cluster binding domain RPIC12D_RS04775 PF04384 Iron-sulphur cluster assembly RPIC12D_RS04785 PF01336 OB-fold nucleic acid binding domain RPIC12D_RS04785 PF00152 tRNA synthetases class II (D, K and N) RPIC12D_RS04790 PF00106 short chain dehydrogenase RPIC12D_RS04795 PF03462 PCRF domain RPIC12D_RS04795 PF00472 RF-1 domain RPIC12D_RS04800 PF00472 RF-1 domain RPIC12D_RS04800 PF03462 PCRF domain RPIC12D_RS04805 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RPIC12D_RS04805 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RPIC12D_RS04810 PF02589 LUD domain RPIC12D_RS04820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RPIC12D_RS04820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RPIC12D_RS04825 PF02646 RmuC family RPIC12D_RS04835 PF03453 MoeA N-terminal region (domain I and II) RPIC12D_RS04835 PF03454 MoeA C-terminal region (domain IV) RPIC12D_RS04835 PF00994 Probable molybdopterin binding domain RPIC12D_RS04840 PF12804 MobA-like NTP transferase domain RPIC12D_RS04845 PF06463 Molybdenum Cofactor Synthesis C RPIC12D_RS04845 PF04055 Radical SAM superfamily RPIC12D_RS04850 PF12111 Polyribonucleotide phosphorylase C terminal RPIC12D_RS04850 PF10150 Ribonuclease E/G family RPIC12D_RS04850 PF00575 S1 RNA binding domain RPIC12D_RS04855 PF01479 S4 domain RPIC12D_RS04855 PF00849 RNA pseudouridylate synthase RPIC12D_RS04860 PF13419 Haloacid dehalogenase-like hydrolase RPIC12D_RS04870 PF06965 Na+/H+ antiporter 1 RPIC12D_RS04870 PF01343 Peptidase family S49 RPIC12D_RS04875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPIC12D_RS04880 PF02545 Maf-like protein RPIC12D_RS04890 PF01783 Ribosomal L32p protein family RPIC12D_RS04895 PF02504 Fatty acid synthesis protein RPIC12D_RS04900 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RPIC12D_RS04900 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RPIC12D_RS04905 PF00698 Acyl transferase domain RPIC12D_RS04915 PF00550 Phosphopantetheine attachment site RPIC12D_RS04920 PF00109 Beta-ketoacyl synthase, N-terminal domain RPIC12D_RS04920 PF02801 Beta-ketoacyl synthase, C-terminal domain RPIC12D_RS04925 PF04542 Sigma-70 region 2 RPIC12D_RS04925 PF08281 Sigma-70, region 4 RPIC12D_RS04940 PF13180 PDZ domain RPIC12D_RS04940 PF17820 PDZ domain RPIC12D_RS04950 PF03144 Elongation factor Tu domain 2 RPIC12D_RS04950 PF00009 Elongation factor Tu GTP binding domain RPIC12D_RS04950 PF00679 Elongation factor G C-terminus RPIC12D_RS04950 PF06421 GTP-binding protein LepA C-terminus RPIC12D_RS04955 PF10502 Signal peptidase, peptidase S26 RPIC12D_RS04965 PF14622 Ribonuclease-III-like RPIC12D_RS04965 PF00035 Double-stranded RNA binding motif RPIC12D_RS04970 PF01926 50S ribosome-binding GTPase RPIC12D_RS04970 PF07650 KH domain RPIC12D_RS04975 PF02565 Recombination protein O C terminal RPIC12D_RS04975 PF11967 Recombination protein O N terminal RPIC12D_RS04980 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RPIC12D_RS04985 PF01648 4'-phosphopantetheinyl transferase superfamily RPIC12D_RS04990 PF00933 Glycosyl hydrolase family 3 N terminal domain RPIC12D_RS04995 PF09285 Elongation factor P, C-terminal RPIC12D_RS04995 PF08207 Elongation factor P (EF-P) KOW-like domain RPIC12D_RS04995 PF01132 Elongation factor P (EF-P) OB domain RPIC12D_RS05005 PF02151 UvrB/uvrC motif RPIC12D_RS05005 PF01541 GIY-YIG catalytic domain RPIC12D_RS05005 PF08459 UvrC Helix-hairpin-helix N-terminal RPIC12D_RS05010 PF01066 CDP-alcohol phosphatidyltransferase RPIC12D_RS05035 PF00072 Response regulator receiver domain RPIC12D_RS05035 PF00486 Transcriptional regulatory protein, C terminal RPIC12D_RS05045 PF01590 GAF domain RPIC12D_RS05045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS05045 PF08446 PAS fold RPIC12D_RS05045 PF00360 Phytochrome region RPIC12D_RS05055 PF00072 Response regulator receiver domain RPIC12D_RS05055 PF00486 Transcriptional regulatory protein, C terminal RPIC12D_RS05065 PF07729 FCD domain RPIC12D_RS05065 PF00392 Bacterial regulatory proteins, gntR family RPIC12D_RS05070 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RPIC12D_RS05070 PF13378 Enolase C-terminal domain-like RPIC12D_RS05075 PF07690 Major Facilitator Superfamily RPIC12D_RS05080 PF01055 Glycosyl hydrolases family 31 RPIC12D_RS05080 PF16338 Domain of unknown function (DUF4968) RPIC12D_RS05080 PF13802 Galactose mutarotase-like RPIC12D_RS05080 PF17137 Domain of unknown function (DUF5110) RPIC12D_RS05085 PF13609 Gram-negative porin RPIC12D_RS05100 PF00589 Phage integrase family RPIC12D_RS05140 PF01527 Transposase RPIC12D_RS05145 PF13683 Integrase core domain RPIC12D_RS05145 PF13276 HTH-like domain RPIC12D_RS05170 PF00171 Aldehyde dehydrogenase family RPIC12D_RS05180 PF03466 LysR substrate binding domain RPIC12D_RS05180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS05185 PF13276 HTH-like domain RPIC12D_RS05185 PF13683 Integrase core domain RPIC12D_RS05190 PF01548 Transposase RPIC12D_RS05190 PF02371 Transposase IS116/IS110/IS902 family RPIC12D_RS05205 PF01695 IstB-like ATP binding protein RPIC12D_RS05210 PF00665 Integrase core domain RPIC12D_RS05225 PF00580 UvrD/REP helicase N-terminal domain RPIC12D_RS05225 PF13361 UvrD-like helicase C-terminal domain RPIC12D_RS05255 PF03466 LysR substrate binding domain RPIC12D_RS05255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS05260 PF03601 Conserved hypothetical protein 698 RPIC12D_RS05280 PF00037 4Fe-4S binding domain RPIC12D_RS05280 PF11953 Domain of unknown function (DUF3470) RPIC12D_RS05285 PF17768 RecJ OB domain RPIC12D_RS05285 PF02272 DHHA1 domain RPIC12D_RS05285 PF01368 DHH family RPIC12D_RS05295 PF02687 FtsX-like permease family RPIC12D_RS05295 PF12704 MacB-like periplasmic core domain RPIC12D_RS05300 PF00005 ABC transporter RPIC12D_RS05305 PF01026 TatD related DNase RPIC12D_RS05310 PF03772 Competence protein RPIC12D_RS05310 PF00753 Metallo-beta-lactamase superfamily RPIC12D_RS05315 PF14403 Circularly permuted ATP-grasp type 2 RPIC12D_RS05325 PF08379 Bacterial transglutaminase-like N-terminal region RPIC12D_RS05325 PF01841 Transglutaminase-like superfamily RPIC12D_RS05335 PF00561 alpha/beta hydrolase fold RPIC12D_RS05335 PF08386 TAP-like protein RPIC12D_RS05340 PF06418 CTP synthase N-terminus RPIC12D_RS05340 PF00117 Glutamine amidotransferase class-I RPIC12D_RS05345 PF00793 DAHP synthetase I family RPIC12D_RS05355 PF00113 Enolase, C-terminal TIM barrel domain RPIC12D_RS05355 PF03952 Enolase, N-terminal domain RPIC12D_RS05360 PF04977 Septum formation initiator RPIC12D_RS05370 PF01430 Hsp33 protein RPIC12D_RS05375 PF00132 Bacterial transferase hexapeptide (six repeats) RPIC12D_RS05380 PF04305 Protein of unknown function (DUF455) RPIC12D_RS05385 PF00561 alpha/beta hydrolase fold RPIC12D_RS05390 PF04134 Protein of unknown function, DUF393 RPIC12D_RS05400 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC12D_RS05405 PF02811 PHP domain RPIC12D_RS05410 PF01300 Telomere recombination RPIC12D_RS05415 PF02163 Peptidase family M50 RPIC12D_RS05420 PF00579 tRNA synthetases class I (W and Y) RPIC12D_RS05430 PF00701 Dihydrodipicolinate synthetase family RPIC12D_RS05435 PF06804 NlpB/DapX lipoprotein RPIC12D_RS05440 PF00753 Metallo-beta-lactamase superfamily RPIC12D_RS05450 PF08007 Cupin superfamily protein RPIC12D_RS05455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RPIC12D_RS05465 PF00488 MutS domain V RPIC12D_RS05465 PF05188 MutS domain II RPIC12D_RS05465 PF05190 MutS family domain IV RPIC12D_RS05465 PF05192 MutS domain III RPIC12D_RS05465 PF01624 MutS domain I RPIC12D_RS05470 PF03466 LysR substrate binding domain RPIC12D_RS05470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS05475 PF00672 HAMP domain RPIC12D_RS05475 PF17200 Single Cache domain 2 RPIC12D_RS05475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC12D_RS05480 PF00672 HAMP domain RPIC12D_RS05480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC12D_RS05480 PF02203 Tar ligand binding domain homologue RPIC12D_RS05485 PF03475 3-alpha domain RPIC12D_RS05485 PF03473 MOSC domain RPIC12D_RS05490 PF00117 Glutamine amidotransferase class-I RPIC12D_RS05495 PF00459 Inositol monophosphatase family RPIC12D_RS05500 PF00588 SpoU rRNA Methylase family RPIC12D_RS05505 PF00132 Bacterial transferase hexapeptide (six repeats) RPIC12D_RS05510 PF00149 Calcineurin-like phosphoesterase RPIC12D_RS05515 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RPIC12D_RS05520 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RPIC12D_RS05530 PF01406 tRNA synthetases class I (C) catalytic domain RPIC12D_RS05530 PF09190 DALR domain RPIC12D_RS05535 PF00730 HhH-GPD superfamily base excision DNA repair protein RPIC12D_RS05540 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RPIC12D_RS05545 PF01171 PP-loop family RPIC12D_RS05545 PF09179 TilS substrate binding domain RPIC12D_RS05545 PF11734 TilS substrate C-terminal domain RPIC12D_RS05550 PF01842 ACT domain RPIC12D_RS05550 PF00696 Amino acid kinase family RPIC12D_RS05550 PF13840 ACT domain RPIC12D_RS05565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RPIC12D_RS05570 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS05575 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS05575 PF12911 N-terminal TM domain of oligopeptide transport permease C RPIC12D_RS05580 PF00005 ABC transporter RPIC12D_RS05580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RPIC12D_RS05585 PF00877 NlpC/P60 family RPIC12D_RS05590 PF01734 Patatin-like phospholipase RPIC12D_RS05595 PF00749 tRNA synthetases class I (E and Q), catalytic domain RPIC12D_RS05615 PF01554 MatE RPIC12D_RS05625 PF01197 Ribosomal protein L31 RPIC12D_RS05635 PF06167 Glucose-regulated metallo-peptidase M90 RPIC12D_RS05640 PF00196 Bacterial regulatory proteins, luxR family RPIC12D_RS05640 PF00072 Response regulator receiver domain RPIC12D_RS05645 PF00072 Response regulator receiver domain RPIC12D_RS05645 PF00158 Sigma-54 interaction domain RPIC12D_RS05645 PF02954 Bacterial regulatory protein, Fis family RPIC12D_RS05650 PF07498 Rho termination factor, N-terminal domain RPIC12D_RS05650 PF07497 Rho termination factor, RNA-binding domain RPIC12D_RS05650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RPIC12D_RS05655 PF00085 Thioredoxin RPIC12D_RS05665 PF12705 PD-(D/E)XK nuclease superfamily RPIC12D_RS05665 PF00580 UvrD/REP helicase N-terminal domain RPIC12D_RS05665 PF13361 UvrD-like helicase C-terminal domain RPIC12D_RS05670 PF12170 DNA polymerase III tau subunit V interacting with alpha RPIC12D_RS05670 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding RPIC12D_RS05670 PF12169 DNA polymerase III subunits gamma and tau domain III RPIC12D_RS05675 PF02575 YbaB/EbfC DNA-binding family RPIC12D_RS05680 PF03992 Antibiotic biosynthesis monooxygenase RPIC12D_RS05685 PF13662 Toprim domain RPIC12D_RS05685 PF02132 RecR protein RPIC12D_RS05700 PF02515 CoA-transferase family III RPIC12D_RS05710 PF00005 ABC transporter RPIC12D_RS05715 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS05720 PF16925 Tetracyclin repressor-like, C-terminal domain RPIC12D_RS05720 PF00440 Bacterial regulatory proteins, tetR family RPIC12D_RS05725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RPIC12D_RS05730 PF08240 Alcohol dehydrogenase GroES-like domain RPIC12D_RS05730 PF08659 KR domain RPIC12D_RS05730 PF02801 Beta-ketoacyl synthase, C-terminal domain RPIC12D_RS05730 PF00550 Phosphopantetheine attachment site RPIC12D_RS05730 PF00698 Acyl transferase domain RPIC12D_RS05730 PF16197 Ketoacyl-synthetase C-terminal extension RPIC12D_RS05730 PF14765 Polyketide synthase dehydratase RPIC12D_RS05730 PF00107 Zinc-binding dehydrogenase RPIC12D_RS05730 PF00109 Beta-ketoacyl synthase, N-terminal domain RPIC12D_RS05735 PF01975 Survival protein SurE RPIC12D_RS05745 PF01476 LysM domain RPIC12D_RS05745 PF01551 Peptidase family M23 RPIC12D_RS05750 PF00140 Sigma-70 factor, region 1.2 RPIC12D_RS05750 PF04542 Sigma-70 region 2 RPIC12D_RS05750 PF04539 Sigma-70 region 3 RPIC12D_RS05750 PF04545 Sigma-70, region 4 RPIC12D_RS05760 PF05958 tRNA (Uracil-5-)-methyltransferase RPIC12D_RS05765 PF01027 Inhibitor of apoptosis-promoting Bax1 RPIC12D_RS05770 PF00334 Nucleoside diphosphate kinase RPIC12D_RS05775 PF04055 Radical SAM superfamily RPIC12D_RS05790 PF04551 GcpE protein RPIC12D_RS05795 PF13393 Histidyl-tRNA synthetase RPIC12D_RS05795 PF03129 Anticodon binding domain RPIC12D_RS05800 PF09976 Tetratricopeptide repeat-like domain RPIC12D_RS05805 PF13360 PQQ-like domain RPIC12D_RS05810 PF01926 50S ribosome-binding GTPase RPIC12D_RS05810 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RPIC12D_RS05815 PF17209 Hfq protein RPIC12D_RS05820 PF16360 GTP-binding GTPase Middle Region RPIC12D_RS05820 PF13167 GTP-binding GTPase N-terminal RPIC12D_RS05820 PF01926 50S ribosome-binding GTPase RPIC12D_RS05825 PF12221 Bacterial membrane protein N terminal RPIC12D_RS05825 PF01145 SPFH domain / Band 7 family RPIC12D_RS05830 PF01145 SPFH domain / Band 7 family RPIC12D_RS05840 PF13393 Histidyl-tRNA synthetase RPIC12D_RS05845 PF00709 Adenylosuccinate synthetase RPIC12D_RS05850 PF00156 Phosphoribosyl transferase domain RPIC12D_RS05860 PF17876 Cold shock domain RPIC12D_RS05860 PF08461 Ribonuclease R winged-helix domain RPIC12D_RS05860 PF08206 Ribonuclease B OB domain RPIC12D_RS05860 PF00575 S1 RNA binding domain RPIC12D_RS05860 PF00773 RNB domain RPIC12D_RS05865 PF00588 SpoU rRNA Methylase family RPIC12D_RS05865 PF08032 RNA 2'-O ribose methyltransferase substrate binding RPIC12D_RS05870 PF02146 Sir2 family RPIC12D_RS05875 PF00923 Transaldolase/Fructose-6-phosphate aldolase RPIC12D_RS05880 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RPIC12D_RS05885 PF04362 Bacterial Fe(2+) trafficking RPIC12D_RS05890 PF00583 Acetyltransferase (GNAT) family RPIC12D_RS05890 PF00696 Amino acid kinase family RPIC12D_RS05895 PF00271 Helicase conserved C-terminal domain RPIC12D_RS05895 PF04408 Helicase associated domain (HA2) RPIC12D_RS05895 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RPIC12D_RS05895 PF11898 Domain of unknown function (DUF3418) RPIC12D_RS05895 PF00270 DEAD/DEAH box helicase RPIC12D_RS05920 PF02464 Competence-damaged protein RPIC12D_RS05920 PF18146 Damage-inducible protein CinA KH domain RPIC12D_RS05920 PF00994 Probable molybdopterin binding domain RPIC12D_RS05930 PF00120 Glutamine synthetase, catalytic domain RPIC12D_RS05930 PF03951 Glutamine synthetase, beta-Grasp domain RPIC12D_RS05940 PF00989 PAS fold RPIC12D_RS05940 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS05940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS05945 PF00158 Sigma-54 interaction domain RPIC12D_RS05945 PF00072 Response regulator receiver domain RPIC12D_RS05945 PF02954 Bacterial regulatory protein, Fis family RPIC12D_RS05960 PF13416 Bacterial extracellular solute-binding protein RPIC12D_RS05965 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS05970 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS05975 PF00005 ABC transporter RPIC12D_RS05975 PF17912 MalK OB fold domain RPIC12D_RS05980 PF03009 Glycerophosphoryl diester phosphodiesterase family RPIC12D_RS05985 PF16078 2-oxoglutarate dehydrogenase N-terminus RPIC12D_RS05985 PF16870 2-oxoglutarate dehydrogenase C-terminal RPIC12D_RS05985 PF00676 Dehydrogenase E1 component RPIC12D_RS05985 PF02779 Transketolase, pyrimidine binding domain RPIC12D_RS05990 PF02817 e3 binding domain RPIC12D_RS05990 PF00364 Biotin-requiring enzyme RPIC12D_RS05990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RPIC12D_RS05995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RPIC12D_RS05995 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC12D_RS06000 PF03969 AFG1-like ATPase RPIC12D_RS06010 PF00403 Heavy-metal-associated domain RPIC12D_RS06020 PF00115 Cytochrome C and Quinol oxidase polypeptide I RPIC12D_RS06035 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP RPIC12D_RS06035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPIC12D_RS06040 PF13746 4Fe-4S dicluster domain RPIC12D_RS06040 PF12801 4Fe-4S binding domain RPIC12D_RS06040 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase RPIC12D_RS06055 PF00027 Cyclic nucleotide-binding domain RPIC12D_RS06055 PF13545 Crp-like helix-turn-helix domain RPIC12D_RS06065 PF04079 Segregation and condensation complex subunit ScpB RPIC12D_RS06070 PF00849 RNA pseudouridylate synthase RPIC12D_RS06070 PF01479 S4 domain RPIC12D_RS06075 PF02576 RimP N-terminal domain RPIC12D_RS06075 PF17384 RimP C-terminal SH3 domain RPIC12D_RS06080 PF08529 NusA N-terminal domain RPIC12D_RS06080 PF13184 NusA-like KH domain RPIC12D_RS06085 PF04760 Translation initiation factor IF-2, N-terminal region RPIC12D_RS06085 PF08364 Bacterial translation initiation factor IF-2 associated region RPIC12D_RS06085 PF11987 Translation-initiation factor 2 RPIC12D_RS06085 PF00009 Elongation factor Tu GTP binding domain RPIC12D_RS06090 PF02033 Ribosome-binding factor A RPIC12D_RS06095 PF01509 TruB family pseudouridylate synthase (N terminal domain) RPIC12D_RS06095 PF09157 Pseudouridine synthase II TruB, C-terminal RPIC12D_RS06095 PF16198 tRNA pseudouridylate synthase B C-terminal domain RPIC12D_RS06100 PF07690 Major Facilitator Superfamily RPIC12D_RS06105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RPIC12D_RS06105 PF00529 HlyD membrane-fusion protein of T1SS RPIC12D_RS06110 PF02321 Outer membrane efflux protein RPIC12D_RS06115 PF01047 MarR family RPIC12D_RS06120 PF00679 Elongation factor G C-terminus RPIC12D_RS06120 PF03144 Elongation factor Tu domain 2 RPIC12D_RS06120 PF00009 Elongation factor Tu GTP binding domain RPIC12D_RS06130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS06130 PF03466 LysR substrate binding domain RPIC12D_RS06135 PF04116 Fatty acid hydroxylase superfamily RPIC12D_RS06140 PF00378 Enoyl-CoA hydratase/isomerase RPIC12D_RS06155 PF17482 Phage tail sheath C-terminal domain RPIC12D_RS06155 PF04984 Phage tail sheath protein subtilisin-like domain RPIC12D_RS06160 PF02136 Nuclear transport factor 2 (NTF2) domain RPIC12D_RS06165 PF03466 LysR substrate binding domain RPIC12D_RS06165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS06185 PF00990 Diguanylate cyclase, GGDEF domain RPIC12D_RS06185 PF05230 MASE2 domain RPIC12D_RS06190 PF12792 CSS motif domain associated with EAL RPIC12D_RS06190 PF00563 EAL domain RPIC12D_RS06200 PF01207 Dihydrouridine synthase (Dus) RPIC12D_RS06215 PF01546 Peptidase family M20/M25/M40 RPIC12D_RS06215 PF07687 Peptidase dimerisation domain RPIC12D_RS06230 PF01726 LexA DNA binding domain RPIC12D_RS06230 PF00717 Peptidase S24-like RPIC12D_RS06235 PF00970 Oxidoreductase FAD-binding domain RPIC12D_RS06235 PF00175 Oxidoreductase NAD-binding domain RPIC12D_RS06240 PF00710 Asparaginase, N-terminal RPIC12D_RS06240 PF17763 Glutaminase/Asparaginase C-terminal domain RPIC12D_RS06245 PF01250 Ribosomal protein S6 RPIC12D_RS06255 PF01084 Ribosomal protein S18 RPIC12D_RS06260 PF01281 Ribosomal protein L9, N-terminal domain RPIC12D_RS06260 PF03948 Ribosomal protein L9, C-terminal domain RPIC12D_RS06265 PF00772 DnaB-like helicase N terminal domain RPIC12D_RS06265 PF03796 DnaB-like helicase C terminal domain RPIC12D_RS06275 PF01384 Phosphate transporter family RPIC12D_RS06280 PF00877 NlpC/P60 family RPIC12D_RS06290 PF02562 PhoH-like protein RPIC12D_RS06290 PF13638 PIN domain RPIC12D_RS06295 PF00578 AhpC/TSA family RPIC12D_RS06300 PF01522 Polysaccharide deacetylase RPIC12D_RS06305 PF00551 Formyl transferase RPIC12D_RS06305 PF01370 NAD dependent epimerase/dehydratase family RPIC12D_RS06305 PF02911 Formyl transferase, C-terminal domain RPIC12D_RS06310 PF01370 NAD dependent epimerase/dehydratase family RPIC12D_RS06310 PF02911 Formyl transferase, C-terminal domain RPIC12D_RS06310 PF00551 Formyl transferase RPIC12D_RS06315 PF00535 Glycosyl transferase family 2 RPIC12D_RS06320 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RPIC12D_RS06325 PF00892 EamA-like transporter family RPIC12D_RS06330 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase RPIC12D_RS06340 PF00155 Aminotransferase class I and II RPIC12D_RS06345 PF01842 ACT domain RPIC12D_RS06345 PF03447 Homoserine dehydrogenase, NAD binding domain RPIC12D_RS06345 PF00742 Homoserine dehydrogenase RPIC12D_RS06350 PF00291 Pyridoxal-phosphate dependent enzyme RPIC12D_RS06350 PF14821 Threonine synthase N terminus RPIC12D_RS06355 PF03167 Uracil DNA glycosylase superfamily RPIC12D_RS06360 PF00994 Probable molybdopterin binding domain RPIC12D_RS06360 PF03454 MoeA C-terminal region (domain IV) RPIC12D_RS06360 PF03453 MoeA N-terminal region (domain I and II) RPIC12D_RS06365 PF02597 ThiS family RPIC12D_RS06370 PF02391 MoaE protein RPIC12D_RS06375 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RPIC12D_RS06380 PF10605 3HB-oligomer hydrolase (3HBOH) RPIC12D_RS06385 PF02861 Clp amino terminal domain, pathogenicity island component RPIC12D_RS06385 PF00004 ATPase family associated with various cellular activities (AAA) RPIC12D_RS06385 PF07724 AAA domain (Cdc48 subfamily) RPIC12D_RS06385 PF17871 AAA lid domain RPIC12D_RS06385 PF10431 C-terminal, D2-small domain, of ClpB protein RPIC12D_RS06390 PF00872 Transposase, Mutator family RPIC12D_RS06405 PF03358 NADPH-dependent FMN reductase RPIC12D_RS06410 PF09084 NMT1/THI5 like RPIC12D_RS06415 PF09084 NMT1/THI5 like RPIC12D_RS06420 PF00296 Luciferase-like monooxygenase RPIC12D_RS06425 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS06430 PF00005 ABC transporter RPIC12D_RS06450 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS06455 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS06460 PF12857 TOBE-like domain RPIC12D_RS06460 PF00005 ABC transporter RPIC12D_RS06460 PF17850 CysA C-terminal regulatory domain RPIC12D_RS06465 PF03466 LysR substrate binding domain RPIC12D_RS06465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS06475 PF02743 Cache domain RPIC12D_RS06475 PF06580 Histidine kinase RPIC12D_RS06475 PF00672 HAMP domain RPIC12D_RS06475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS06480 PF04397 LytTr DNA-binding domain RPIC12D_RS06480 PF00072 Response regulator receiver domain RPIC12D_RS06485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPIC12D_RS06485 PF00205 Thiamine pyrophosphate enzyme, central domain RPIC12D_RS06485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPIC12D_RS06490 PF03737 Aldolase/RraA RPIC12D_RS06505 PF00463 Isocitrate lyase family RPIC12D_RS06515 PF01177 Asp/Glu/Hydantoin racemase RPIC12D_RS06520 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RPIC12D_RS06530 PF03466 LysR substrate binding domain RPIC12D_RS06530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS06540 PF01274 Malate synthase RPIC12D_RS06550 PF07690 Major Facilitator Superfamily RPIC12D_RS06560 PF00814 Glycoprotease family RPIC12D_RS06565 PF00583 Acetyltransferase (GNAT) family RPIC12D_RS06570 PF03167 Uracil DNA glycosylase superfamily RPIC12D_RS06575 PF07690 Major Facilitator Superfamily RPIC12D_RS06580 PF01168 Alanine racemase, N-terminal domain RPIC12D_RS06580 PF00842 Alanine racemase, C-terminal domain RPIC12D_RS06585 PF18073 Rubredoxin metal binding domain RPIC12D_RS06590 PF02600 Disulfide bond formation protein DsbB RPIC12D_RS06595 PF04463 Protein of unknown function (DUF523) RPIC12D_RS06600 PF02515 CoA-transferase family III RPIC12D_RS06605 PF12848 ABC transporter RPIC12D_RS06605 PF00005 ABC transporter RPIC12D_RS06615 PF01112 Asparaginase RPIC12D_RS06620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RPIC12D_RS06620 PF00005 ABC transporter RPIC12D_RS06625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RPIC12D_RS06630 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS06635 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS06635 PF12911 N-terminal TM domain of oligopeptide transport permease C RPIC12D_RS06640 PF03576 Peptidase family S58 RPIC12D_RS06655 PF05175 Methyltransferase small domain RPIC12D_RS06665 PF01546 Peptidase family M20/M25/M40 RPIC12D_RS06665 PF07687 Peptidase dimerisation domain RPIC12D_RS06670 PF03960 ArsC family RPIC12D_RS06680 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RPIC12D_RS06680 PF00132 Bacterial transferase hexapeptide (six repeats) RPIC12D_RS06680 PF14602 Hexapeptide repeat of succinyl-transferase RPIC12D_RS06685 PF00155 Aminotransferase class I and II RPIC12D_RS06690 PF00892 EamA-like transporter family RPIC12D_RS06695 PF00561 alpha/beta hydrolase fold RPIC12D_RS06700 PF02463 RecF/RecN/SMC N terminal domain RPIC12D_RS06700 PF06470 SMC proteins Flexible Hinge Domain RPIC12D_RS06710 PF12826 Helix-hairpin-helix motif RPIC12D_RS06710 PF01653 NAD-dependent DNA ligase adenylation domain RPIC12D_RS06710 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RPIC12D_RS06710 PF03120 NAD-dependent DNA ligase OB-fold domain RPIC12D_RS06710 PF00533 BRCA1 C Terminus (BRCT) domain RPIC12D_RS06715 PF01327 Polypeptide deformylase RPIC12D_RS06725 PF01479 S4 domain RPIC12D_RS06725 PF00849 RNA pseudouridylate synthase RPIC12D_RS06730 PF01909 Nucleotidyltransferase domain RPIC12D_RS06730 PF08335 GlnD PII-uridylyltransferase RPIC12D_RS06730 PF01966 HD domain RPIC12D_RS06735 PF00557 Metallopeptidase family M24 RPIC12D_RS06740 PF00318 Ribosomal protein S2 RPIC12D_RS06745 PF00889 Elongation factor TS RPIC12D_RS06750 PF00696 Amino acid kinase family RPIC12D_RS06755 PF01765 Ribosome recycling factor RPIC12D_RS06760 PF01255 Putative undecaprenyl diphosphate synthase RPIC12D_RS06770 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RPIC12D_RS06770 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RPIC12D_RS06770 PF13288 DXP reductoisomerase C-terminal domain RPIC12D_RS06775 PF17820 PDZ domain RPIC12D_RS06775 PF02163 Peptidase family M50 RPIC12D_RS06780 PF01103 Surface antigen RPIC12D_RS06780 PF07244 Surface antigen variable number repeat RPIC12D_RS06785 PF03938 Outer membrane protein (OmpH-like) RPIC12D_RS06790 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RPIC12D_RS06790 PF00132 Bacterial transferase hexapeptide (six repeats) RPIC12D_RS06795 PF07977 FabA-like domain RPIC12D_RS06800 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RPIC12D_RS06800 PF00132 Bacterial transferase hexapeptide (six repeats) RPIC12D_RS06805 PF02684 Lipid-A-disaccharide synthetase RPIC12D_RS06810 PF01351 Ribonuclease HII RPIC12D_RS06815 PF00588 SpoU rRNA Methylase family RPIC12D_RS06815 PF08032 RNA 2'-O ribose methyltransferase substrate binding RPIC12D_RS06825 PF00561 alpha/beta hydrolase fold RPIC12D_RS06825 PF00106 short chain dehydrogenase RPIC12D_RS06835 PF03618 Kinase/pyrophosphorylase RPIC12D_RS06840 PF02896 PEP-utilising enzyme, TIM barrel domain RPIC12D_RS06840 PF00391 PEP-utilising enzyme, mobile domain RPIC12D_RS06840 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RPIC12D_RS06850 PF01145 SPFH domain / Band 7 family RPIC12D_RS06850 PF16200 C-terminal region of band_7 RPIC12D_RS06855 PF01668 SmpB protein RPIC12D_RS06860 PF03364 Polyketide cyclase / dehydrase and lipid transport RPIC12D_RS06865 PF03658 RnfH family Ubiquitin RPIC12D_RS06875 PF00892 EamA-like transporter family RPIC12D_RS06880 PF00571 CBS domain RPIC12D_RS06880 PF00478 IMP dehydrogenase / GMP reductase domain RPIC12D_RS06890 PF00958 GMP synthase C terminal domain RPIC12D_RS06890 PF02540 NAD synthase RPIC12D_RS06890 PF00117 Glutamine amidotransferase class-I RPIC12D_RS06900 PF00313 'Cold-shock' DNA-binding domain RPIC12D_RS06930 PF00375 Sodium:dicarboxylate symporter family RPIC12D_RS06935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS06935 PF03466 LysR substrate binding domain RPIC12D_RS06940 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal RPIC12D_RS06940 PF00775 Dioxygenase RPIC12D_RS06945 PF00775 Dioxygenase RPIC12D_RS06965 PF03466 LysR substrate binding domain RPIC12D_RS06965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS06980 PF01323 DSBA-like thioredoxin domain RPIC12D_RS06985 PF03466 LysR substrate binding domain RPIC12D_RS06985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS07000 PF01242 6-pyruvoyl tetrahydropterin synthase RPIC12D_RS07005 PF14437 MafB19-like deaminase RPIC12D_RS07010 PF02016 LD-carboxypeptidase N-terminal domain RPIC12D_RS07010 PF17676 LD-carboxypeptidase C-terminal domain RPIC12D_RS07015 PF00005 ABC transporter RPIC12D_RS07015 PF12848 ABC transporter RPIC12D_RS07025 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RPIC12D_RS07025 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RPIC12D_RS07030 PF03466 LysR substrate binding domain RPIC12D_RS07030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS07040 PF00171 Aldehyde dehydrogenase family RPIC12D_RS07050 PF00723 Glycosyl hydrolases family 15 RPIC12D_RS07060 PF00793 DAHP synthetase I family RPIC12D_RS07065 PF00672 HAMP domain RPIC12D_RS07065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC12D_RS07065 PF02203 Tar ligand binding domain homologue RPIC12D_RS07075 PF02308 MgtC family RPIC12D_RS07085 PF02625 XdhC and CoxI family RPIC12D_RS07085 PF13478 XdhC Rossmann domain RPIC12D_RS07110 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RPIC12D_RS07110 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPIC12D_RS07115 PF00111 2Fe-2S iron-sulfur cluster binding domain RPIC12D_RS07115 PF01799 [2Fe-2S] binding domain RPIC12D_RS07120 PF05981 CreA protein RPIC12D_RS07125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS07125 PF03466 LysR substrate binding domain RPIC12D_RS07140 PF03466 LysR substrate binding domain RPIC12D_RS07140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS07145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RPIC12D_RS07145 PF13378 Enolase C-terminal domain-like RPIC12D_RS07150 PF02426 Muconolactone delta-isomerase RPIC12D_RS07155 PF00775 Dioxygenase RPIC12D_RS07155 PF04444 Catechol dioxygenase N terminus RPIC12D_RS07160 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RPIC12D_RS07160 PF00355 Rieske [2Fe-2S] domain RPIC12D_RS07165 PF00866 Ring hydroxylating beta subunit RPIC12D_RS07170 PF00970 Oxidoreductase FAD-binding domain RPIC12D_RS07170 PF00111 2Fe-2S iron-sulfur cluster binding domain RPIC12D_RS07170 PF00175 Oxidoreductase NAD-binding domain RPIC12D_RS07175 PF00106 short chain dehydrogenase RPIC12D_RS07180 PF07690 Major Facilitator Superfamily RPIC12D_RS07185 PF03594 Benzoate membrane transport protein RPIC12D_RS07190 PF00202 Aminotransferase class-III RPIC12D_RS07195 PF00155 Aminotransferase class I and II RPIC12D_RS07225 PF00682 HMGL-like RPIC12D_RS07230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS07230 PF03466 LysR substrate binding domain RPIC12D_RS07235 PF02515 CoA-transferase family III RPIC12D_RS07240 PF00330 Aconitase family (aconitate hydratase) RPIC12D_RS07245 PF00694 Aconitase C-terminal domain RPIC12D_RS07250 PF07690 Major Facilitator Superfamily RPIC12D_RS07260 PF07690 Major Facilitator Superfamily RPIC12D_RS07270 PF03466 LysR substrate binding domain RPIC12D_RS07270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS07275 PF07690 Major Facilitator Superfamily RPIC12D_RS07280 PF07687 Peptidase dimerisation domain RPIC12D_RS07280 PF01546 Peptidase family M20/M25/M40 RPIC12D_RS07285 PF01425 Amidase RPIC12D_RS07300 PF00149 Calcineurin-like phosphoesterase RPIC12D_RS07305 PF00005 ABC transporter RPIC12D_RS07305 PF08402 TOBE domain RPIC12D_RS07310 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS07315 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS07320 PF01547 Bacterial extracellular solute-binding protein RPIC12D_RS07325 PF00356 Bacterial regulatory proteins, lacI family RPIC12D_RS07330 PF03781 Sulfatase-modifying factor enzyme 1 RPIC12D_RS07330 PF12867 DinB superfamily RPIC12D_RS07340 PF01026 TatD related DNase RPIC12D_RS07350 PF09115 DNA polymerase III, delta subunit, C terminal RPIC12D_RS07355 PF02223 Thymidylate kinase RPIC12D_RS07360 PF02618 YceG-like family RPIC12D_RS07365 PF01571 Aminomethyltransferase folate-binding domain RPIC12D_RS07385 PF03466 LysR substrate binding domain RPIC12D_RS07385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS07400 PF07859 alpha/beta hydrolase fold RPIC12D_RS07405 PF00465 Iron-containing alcohol dehydrogenase RPIC12D_RS07410 PF00561 alpha/beta hydrolase fold RPIC12D_RS07415 PF00106 short chain dehydrogenase RPIC12D_RS07425 PF00596 Class II Aldolase and Adducin N-terminal domain RPIC12D_RS07430 PF16884 N-terminal domain of oxidoreductase RPIC12D_RS07430 PF00107 Zinc-binding dehydrogenase RPIC12D_RS07435 PF00144 Beta-lactamase RPIC12D_RS07450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS07450 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC12D_RS07450 PF12806 Acetyl-CoA dehydrogenase C-terminal like RPIC12D_RS07450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC12D_RS07455 PF00108 Thiolase, N-terminal domain RPIC12D_RS07455 PF02803 Thiolase, C-terminal domain RPIC12D_RS07460 PF00857 Isochorismatase family RPIC12D_RS07465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RPIC12D_RS07465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS07465 PF00378 Enoyl-CoA hydratase/isomerase RPIC12D_RS07470 PF00324 Amino acid permease RPIC12D_RS07475 PF00324 Amino acid permease RPIC12D_RS07480 PF00005 ABC transporter RPIC12D_RS07485 PF00005 ABC transporter RPIC12D_RS07485 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPIC12D_RS07495 PF02653 Branched-chain amino acid transport system / permease component RPIC12D_RS07500 PF13458 Periplasmic binding protein RPIC12D_RS07505 PF00501 AMP-binding enzyme RPIC12D_RS07505 PF13193 AMP-binding enzyme C-terminal domain RPIC12D_RS07510 PF02696 Uncharacterized ACR, YdiU/UPF0061 family RPIC12D_RS07515 PF01641 SelR domain RPIC12D_RS07520 PF04279 Intracellular septation protein A RPIC12D_RS07525 PF01722 BolA-like protein RPIC12D_RS07545 PF00005 ABC transporter RPIC12D_RS07550 PF06715 Gp5 C-terminal repeat (3 copies) RPIC12D_RS07550 PF04717 Type VI secretion system, phage-baseplate injector RPIC12D_RS07555 PF05360 yiaA/B two helix domain RPIC12D_RS07610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS07610 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS07615 PF08402 TOBE domain RPIC12D_RS07615 PF00005 ABC transporter RPIC12D_RS07625 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS07630 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS07645 PF03466 LysR substrate binding domain RPIC12D_RS07645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS07655 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal RPIC12D_RS07655 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RPIC12D_RS07655 PF02769 AIR synthase related protein, C-terminal domain RPIC12D_RS07665 PF03853 YjeF-related protein N-terminus RPIC12D_RS07665 PF01256 Carbohydrate kinase RPIC12D_RS07670 PF00342 Phosphoglucose isomerase RPIC12D_RS07675 PF00005 ABC transporter RPIC12D_RS07680 PF13472 GDSL-like Lipase/Acylhydrolase family RPIC12D_RS07685 PF10502 Signal peptidase, peptidase S26 RPIC12D_RS07690 PF05698 Bacterial trigger factor protein (TF) C-terminus RPIC12D_RS07705 PF00216 Bacterial DNA-binding protein RPIC12D_RS07710 PF00004 ATPase family associated with various cellular activities (AAA) RPIC12D_RS07710 PF05362 Lon protease (S16) C-terminal proteolytic domain RPIC12D_RS07710 PF02190 ATP-dependent protease La (LON) substrate-binding domain RPIC12D_RS07715 PF06689 ClpX C4-type zinc finger RPIC12D_RS07715 PF07724 AAA domain (Cdc48 subfamily) RPIC12D_RS07715 PF10431 C-terminal, D2-small domain, of ClpB protein RPIC12D_RS07720 PF00574 Clp protease RPIC12D_RS07725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RPIC12D_RS07725 PF05698 Bacterial trigger factor protein (TF) C-terminus RPIC12D_RS07725 PF05697 Bacterial trigger factor protein (TF) RPIC12D_RS07730 PF01266 FAD dependent oxidoreductase RPIC12D_RS07730 PF05430 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS07740 PF00083 Sugar (and other) transporter RPIC12D_RS07740 PF07690 Major Facilitator Superfamily RPIC12D_RS07745 PF02515 CoA-transferase family III RPIC12D_RS07750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS07750 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC12D_RS07750 PF18158 Adaptive response protein AidB N-terminal domain RPIC12D_RS07755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS07755 PF03466 LysR substrate binding domain RPIC12D_RS07765 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RPIC12D_RS07770 PF00510 Cytochrome c oxidase subunit III RPIC12D_RS07775 PF00115 Cytochrome C and Quinol oxidase polypeptide I RPIC12D_RS07780 PF06481 COX Aromatic Rich Motif RPIC12D_RS07780 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RPIC12D_RS07785 PF00083 Sugar (and other) transporter RPIC12D_RS07785 PF07690 Major Facilitator Superfamily RPIC12D_RS07800 PF17645 Arylmalonate decarboxylase RPIC12D_RS07805 PF07690 Major Facilitator Superfamily RPIC12D_RS07810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS07810 PF03466 LysR substrate binding domain RPIC12D_RS07840 PF03150 Di-haem cytochrome c peroxidase RPIC12D_RS07855 PF00873 AcrB/AcrD/AcrF family RPIC12D_RS07860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RPIC12D_RS07885 PF00072 Response regulator receiver domain RPIC12D_RS07885 PF00486 Transcriptional regulatory protein, C terminal RPIC12D_RS07890 PF00672 HAMP domain RPIC12D_RS07890 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS07890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS07895 PF00578 AhpC/TSA family RPIC12D_RS07900 PF02627 Carboxymuconolactone decarboxylase family RPIC12D_RS07905 PF02542 YgbB family RPIC12D_RS07910 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RPIC12D_RS07915 PF17757 UvrB interaction domain RPIC12D_RS07915 PF03461 TRCF domain RPIC12D_RS07915 PF02559 CarD-like/TRCF domain RPIC12D_RS07915 PF00270 DEAD/DEAH box helicase RPIC12D_RS07915 PF00271 Helicase conserved C-terminal domain RPIC12D_RS07920 PF01546 Peptidase family M20/M25/M40 RPIC12D_RS07920 PF07687 Peptidase dimerisation domain RPIC12D_RS07930 PF17761 DUF1016 N-terminal domain RPIC12D_RS07930 PF06250 YhcG PDDEXK nuclease domain RPIC12D_RS07935 PF01053 Cys/Met metabolism PLP-dependent enzyme RPIC12D_RS07945 PF02803 Thiolase, C-terminal domain RPIC12D_RS07945 PF00108 Thiolase, N-terminal domain RPIC12D_RS07950 PF00919 Uncharacterized protein family UPF0004 RPIC12D_RS07950 PF18693 TRAM domain RPIC12D_RS07950 PF04055 Radical SAM superfamily RPIC12D_RS07955 PF01207 Dihydrouridine synthase (Dus) RPIC12D_RS07960 PF05233 PHB accumulation regulatory domain RPIC12D_RS07960 PF07879 PHB/PHA accumulation regulator DNA-binding domain RPIC12D_RS07965 PF00106 short chain dehydrogenase RPIC12D_RS07970 PF02803 Thiolase, C-terminal domain RPIC12D_RS07970 PF00108 Thiolase, N-terminal domain RPIC12D_RS07975 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus RPIC12D_RS07985 PF02578 Multi-copper polyphenol oxidoreductase laccase RPIC12D_RS07990 PF00849 RNA pseudouridylate synthase RPIC12D_RS07990 PF01479 S4 domain RPIC12D_RS07995 PF13525 Outer membrane lipoprotein RPIC12D_RS08000 PF13307 Helicase C-terminal domain RPIC12D_RS08000 PF04851 Type III restriction enzyme, res subunit RPIC12D_RS08015 PF17674 HHH domain RPIC12D_RS08015 PF09371 Tex-like protein N-terminal domain RPIC12D_RS08015 PF16921 Tex protein YqgF-like domain RPIC12D_RS08015 PF00575 S1 RNA binding domain RPIC12D_RS08025 PF02705 K+ potassium transporter RPIC12D_RS08035 PF01180 Dihydroorotate dehydrogenase RPIC12D_RS08055 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RPIC12D_RS08060 PF04376 Arginine-tRNA-protein transferase, N terminus RPIC12D_RS08060 PF04377 Arginine-tRNA-protein transferase, C terminus RPIC12D_RS08075 PF02589 LUD domain RPIC12D_RS08075 PF11870 Domain of unknown function (DUF3390) RPIC12D_RS08075 PF13183 4Fe-4S dicluster domain RPIC12D_RS08080 PF02754 Cysteine-rich domain RPIC12D_RS08085 PF01614 Bacterial transcriptional regulator RPIC12D_RS08085 PF09339 IclR helix-turn-helix domain RPIC12D_RS08090 PF00768 D-alanyl-D-alanine carboxypeptidase RPIC12D_RS08095 PF00881 Nitroreductase family RPIC12D_RS08100 PF03061 Thioesterase superfamily RPIC12D_RS08110 PF00850 Histone deacetylase domain RPIC12D_RS08115 PF09361 Phasin protein RPIC12D_RS08125 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC12D_RS08125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RPIC12D_RS08135 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RPIC12D_RS08135 PF02817 e3 binding domain RPIC12D_RS08135 PF00364 Biotin-requiring enzyme RPIC12D_RS08140 PF00456 Transketolase, thiamine diphosphate binding domain RPIC12D_RS08140 PF17831 Pyruvate dehydrogenase E1 component middle domain RPIC12D_RS08145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS08145 PF00989 PAS fold RPIC12D_RS08145 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS08150 PF00196 Bacterial regulatory proteins, luxR family RPIC12D_RS08150 PF00072 Response regulator receiver domain RPIC12D_RS08155 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RPIC12D_RS08155 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RPIC12D_RS08160 PF01432 Peptidase family M3 RPIC12D_RS08175 PF03328 HpcH/HpaI aldolase/citrate lyase family RPIC12D_RS08180 PF01557 Fumarylacetoacetate (FAA) hydrolase family RPIC12D_RS08190 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RPIC12D_RS08195 PF00171 Aldehyde dehydrogenase family RPIC12D_RS08200 PF01557 Fumarylacetoacetate (FAA) hydrolase family RPIC12D_RS08205 PF01557 Fumarylacetoacetate (FAA) hydrolase family RPIC12D_RS08215 PF13520 Amino acid permease RPIC12D_RS08220 PF11799 impB/mucB/samB family C-terminal domain RPIC12D_RS08220 PF00817 impB/mucB/samB family RPIC12D_RS08235 PF02627 Carboxymuconolactone decarboxylase family RPIC12D_RS08240 PF12852 Cupin RPIC12D_RS08240 PF12833 Helix-turn-helix domain RPIC12D_RS08255 PF00216 Bacterial DNA-binding protein RPIC12D_RS08260 PF01588 Putative tRNA binding domain RPIC12D_RS08260 PF03483 B3/4 domain RPIC12D_RS08260 PF03484 tRNA synthetase B5 domain RPIC12D_RS08260 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RPIC12D_RS08260 PF03147 Ferredoxin-fold anticodon binding domain RPIC12D_RS08265 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RPIC12D_RS08265 PF01409 tRNA synthetases class II core domain (F) RPIC12D_RS08270 PF00453 Ribosomal protein L20 RPIC12D_RS08275 PF01632 Ribosomal protein L35 RPIC12D_RS08280 PF00707 Translation initiation factor IF-3, C-terminal domain RPIC12D_RS08280 PF05198 Translation initiation factor IF-3, N-terminal domain RPIC12D_RS08285 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RPIC12D_RS08285 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RPIC12D_RS08285 PF02824 TGS domain RPIC12D_RS08285 PF03129 Anticodon binding domain RPIC12D_RS08295 PF04607 Region found in RelA / SpoT proteins RPIC12D_RS08295 PF02824 TGS domain RPIC12D_RS08295 PF13291 ACT domain RPIC12D_RS08300 PF01042 Endoribonuclease L-PSP RPIC12D_RS08310 PF00106 short chain dehydrogenase RPIC12D_RS08315 PF01144 Coenzyme A transferase RPIC12D_RS08320 PF01144 Coenzyme A transferase RPIC12D_RS08325 PF00196 Bacterial regulatory proteins, luxR family RPIC12D_RS08325 PF00072 Response regulator receiver domain RPIC12D_RS08340 PF01264 Chorismate synthase RPIC12D_RS08345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RPIC12D_RS08345 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RPIC12D_RS08350 PF07690 Major Facilitator Superfamily RPIC12D_RS08355 PF00478 IMP dehydrogenase / GMP reductase domain RPIC12D_RS08355 PF00571 CBS domain RPIC12D_RS08360 PF01053 Cys/Met metabolism PLP-dependent enzyme RPIC12D_RS08365 PF00364 Biotin-requiring enzyme RPIC12D_RS08365 PF00561 alpha/beta hydrolase fold RPIC12D_RS08375 PF03631 Virulence factor BrkB RPIC12D_RS08380 PF03358 NADPH-dependent FMN reductase RPIC12D_RS08390 PF02913 FAD linked oxidases, C-terminal domain RPIC12D_RS08390 PF01565 FAD binding domain RPIC12D_RS08420 PF00691 OmpA family RPIC12D_RS08420 PF04972 BON domain RPIC12D_RS08425 PF06761 Intracellular multiplication and human macrophage-killing RPIC12D_RS08425 PF06744 Type VI secretion protein IcmF C-terminal RPIC12D_RS08425 PF14331 ImcF-related N-terminal domain RPIC12D_RS08430 PF00691 OmpA family RPIC12D_RS08435 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE RPIC12D_RS08455 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) RPIC12D_RS08455 PF04717 Type VI secretion system, phage-baseplate injector RPIC12D_RS08455 PF13296 Putative type VI secretion system Rhs element Vgr RPIC12D_RS08470 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath RPIC12D_RS08475 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 RPIC12D_RS08480 PF17871 AAA lid domain RPIC12D_RS08480 PF00004 ATPase family associated with various cellular activities (AAA) RPIC12D_RS08480 PF10431 C-terminal, D2-small domain, of ClpB protein RPIC12D_RS08480 PF07724 AAA domain (Cdc48 subfamily) RPIC12D_RS08510 PF05947 Type VI secretion system, TssF RPIC12D_RS08530 PF01037 Lrp/AsnC ligand binding domain RPIC12D_RS08530 PF13404 AsnC-type helix-turn-helix domain RPIC12D_RS08535 PF00266 Aminotransferase class-V RPIC12D_RS08540 PF01037 Lrp/AsnC ligand binding domain RPIC12D_RS08545 PF00291 Pyridoxal-phosphate dependent enzyme RPIC12D_RS08555 PF00248 Aldo/keto reductase family RPIC12D_RS08560 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RPIC12D_RS08560 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC12D_RS08575 PF01810 LysE type translocator RPIC12D_RS08580 PF03466 LysR substrate binding domain RPIC12D_RS08580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS08585 PF00753 Metallo-beta-lactamase superfamily RPIC12D_RS08595 PF01925 Sulfite exporter TauE/SafE RPIC12D_RS08615 PF02541 Ppx/GppA phosphatase family RPIC12D_RS08620 PF13090 Polyphosphate kinase C-terminal domain 2 RPIC12D_RS08620 PF02503 Polyphosphate kinase middle domain RPIC12D_RS08620 PF13089 Polyphosphate kinase N-terminal domain RPIC12D_RS08620 PF17941 Polyphosphate kinase C-terminal domain 1 RPIC12D_RS08625 PF11808 Phosphate regulon sensor protein PhoR RPIC12D_RS08625 PF00989 PAS fold RPIC12D_RS08625 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS08625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS08630 PF00486 Transcriptional regulatory protein, C terminal RPIC12D_RS08630 PF00072 Response regulator receiver domain RPIC12D_RS08635 PF01895 PhoU domain RPIC12D_RS08640 PF00005 ABC transporter RPIC12D_RS08645 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS08650 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS08655 PF12849 PBP superfamily domain RPIC12D_RS08660 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RPIC12D_RS08660 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RPIC12D_RS08660 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RPIC12D_RS08660 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RPIC12D_RS08665 PF00809 Pterin binding enzyme RPIC12D_RS08670 PF06480 FtsH Extracellular RPIC12D_RS08670 PF00004 ATPase family associated with various cellular activities (AAA) RPIC12D_RS08670 PF01434 Peptidase family M41 RPIC12D_RS08670 PF17862 AAA+ lid domain RPIC12D_RS08675 PF01728 FtsJ-like methyltransferase RPIC12D_RS08680 PF01985 CRS1 / YhbY (CRM) domain RPIC12D_RS08690 PF01272 Transcription elongation factor, GreA/GreB, C-term RPIC12D_RS08690 PF03449 Transcription elongation factor, N-terminal RPIC12D_RS08695 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPIC12D_RS08695 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RPIC12D_RS08695 PF02142 MGS-like domain RPIC12D_RS08700 PF01810 LysE type translocator RPIC12D_RS08705 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RPIC12D_RS08705 PF00117 Glutamine amidotransferase class-I RPIC12D_RS08710 PF16177 Acetyl-coenzyme A synthetase N-terminus RPIC12D_RS08710 PF13193 AMP-binding enzyme C-terminal domain RPIC12D_RS08710 PF00501 AMP-binding enzyme RPIC12D_RS08715 PF01476 LysM domain RPIC12D_RS08715 PF01464 Transglycosylase SLT domain RPIC12D_RS08720 PF00753 Metallo-beta-lactamase superfamily RPIC12D_RS08720 PF16123 Hydroxyacylglutathione hydrolase C-terminus RPIC12D_RS08725 PF08241 Methyltransferase domain RPIC12D_RS08730 PF00075 RNase H RPIC12D_RS08740 PF00959 Phage lysozyme RPIC12D_RS08755 PF00196 Bacterial regulatory proteins, luxR family RPIC12D_RS08755 PF00072 Response regulator receiver domain RPIC12D_RS08765 PF04293 SpoVR like protein RPIC12D_RS08770 PF04285 Protein of unknown function (DUF444) RPIC12D_RS08775 PF06798 PrkA serine protein kinase C-terminal domain RPIC12D_RS08775 PF08298 PrkA AAA domain RPIC12D_RS08780 PF03466 LysR substrate binding domain RPIC12D_RS08780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS08785 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPIC12D_RS08785 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RPIC12D_RS08790 PF03450 CO dehydrogenase flavoprotein C-terminal domain RPIC12D_RS08790 PF00941 FAD binding domain in molybdopterin dehydrogenase RPIC12D_RS08795 PF00111 2Fe-2S iron-sulfur cluster binding domain RPIC12D_RS08795 PF01799 [2Fe-2S] binding domain RPIC12D_RS08800 PF13193 AMP-binding enzyme C-terminal domain RPIC12D_RS08800 PF00501 AMP-binding enzyme RPIC12D_RS08805 PF00378 Enoyl-CoA hydratase/isomerase RPIC12D_RS08805 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RPIC12D_RS08805 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS08820 PF00929 Exonuclease RPIC12D_RS08825 PF00551 Formyl transferase RPIC12D_RS08855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS08855 PF03466 LysR substrate binding domain RPIC12D_RS08860 PF13454 FAD-NAD(P)-binding RPIC12D_RS08865 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS08870 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS08870 PF12911 N-terminal TM domain of oligopeptide transport permease C RPIC12D_RS08875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RPIC12D_RS08875 PF00005 ABC transporter RPIC12D_RS08880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RPIC12D_RS08880 PF00005 ABC transporter RPIC12D_RS08885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RPIC12D_RS08900 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RPIC12D_RS08905 PF00111 2Fe-2S iron-sulfur cluster binding domain RPIC12D_RS08905 PF01799 [2Fe-2S] binding domain RPIC12D_RS08920 PF02129 X-Pro dipeptidyl-peptidase (S15 family) RPIC12D_RS08920 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain RPIC12D_RS08925 PF00672 HAMP domain RPIC12D_RS08925 PF02203 Tar ligand binding domain homologue RPIC12D_RS08925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC12D_RS08940 PF00474 Sodium:solute symporter family RPIC12D_RS08945 PF16177 Acetyl-coenzyme A synthetase N-terminus RPIC12D_RS08945 PF00501 AMP-binding enzyme RPIC12D_RS08945 PF13193 AMP-binding enzyme C-terminal domain RPIC12D_RS08950 PF00892 EamA-like transporter family RPIC12D_RS08955 PF03350 Uncharacterized protein family, UPF0114 RPIC12D_RS08965 PF01177 Asp/Glu/Hydantoin racemase RPIC12D_RS08970 PF00375 Sodium:dicarboxylate symporter family RPIC12D_RS08995 PF13545 Crp-like helix-turn-helix domain RPIC12D_RS08995 PF00027 Cyclic nucleotide-binding domain RPIC12D_RS09000 PF08859 DGC domain RPIC12D_RS09005 PF02036 SCP-2 sterol transfer family RPIC12D_RS09010 PF01136 Peptidase family U32 RPIC12D_RS09015 PF01136 Peptidase family U32 RPIC12D_RS09025 PF06480 FtsH Extracellular RPIC12D_RS09025 PF00004 ATPase family associated with various cellular activities (AAA) RPIC12D_RS09025 PF01434 Peptidase family M41 RPIC12D_RS09025 PF17862 AAA+ lid domain RPIC12D_RS09035 PF01618 MotA/TolQ/ExbB proton channel family RPIC12D_RS09040 PF02472 Biopolymer transport protein ExbD/TolR RPIC12D_RS09050 PF03928 Haem-degrading RPIC12D_RS09085 PF00005 ABC transporter RPIC12D_RS09090 PF01061 ABC-2 type transporter RPIC12D_RS09095 PF00156 Phosphoribosyl transferase domain RPIC12D_RS09110 PF08245 Mur ligase middle domain RPIC12D_RS09110 PF02875 Mur ligase family, glutamate ligase domain RPIC12D_RS09115 PF01039 Carboxyl transferase domain RPIC12D_RS09115 PF17848 Acetyl-coA carboxylase zinc finger domain RPIC12D_RS09120 PF00290 Tryptophan synthase alpha chain RPIC12D_RS09125 PF01555 DNA methylase RPIC12D_RS09130 PF00291 Pyridoxal-phosphate dependent enzyme RPIC12D_RS09135 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RPIC12D_RS09140 PF01416 tRNA pseudouridine synthase RPIC12D_RS09150 PF01118 Semialdehyde dehydrogenase, NAD binding domain RPIC12D_RS09150 PF02774 Semialdehyde dehydrogenase, dimerisation domain RPIC12D_RS09155 PF00180 Isocitrate/isopropylmalate dehydrogenase RPIC12D_RS09160 PF00694 Aconitase C-terminal domain RPIC12D_RS09165 PF00330 Aconitase family (aconitate hydratase) RPIC12D_RS09170 PF00285 Citrate synthase, C-terminal domain RPIC12D_RS09175 PF03937 Flavinator of succinate dehydrogenase RPIC12D_RS09180 PF13085 2Fe-2S iron-sulfur cluster binding domain RPIC12D_RS09185 PF02910 Fumarate reductase flavoprotein C-term RPIC12D_RS09185 PF00890 FAD binding domain RPIC12D_RS09190 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RPIC12D_RS09200 PF00392 Bacterial regulatory proteins, gntR family RPIC12D_RS09200 PF00155 Aminotransferase class I and II RPIC12D_RS09205 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RPIC12D_RS09205 PF00056 lactate/malate dehydrogenase, NAD binding domain RPIC12D_RS09230 PF00694 Aconitase C-terminal domain RPIC12D_RS09230 PF00330 Aconitase family (aconitate hydratase) RPIC12D_RS09245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RPIC12D_RS09255 PF00246 Zinc carboxypeptidase RPIC12D_RS09255 PF18027 Cytosolic carboxypeptidase N-terminal domain RPIC12D_RS09260 PF03883 Peroxide stress protein YaaA RPIC12D_RS09270 PF00155 Aminotransferase class I and II RPIC12D_RS09275 PF14497 Glutathione S-transferase, C-terminal domain RPIC12D_RS09275 PF13417 Glutathione S-transferase, N-terminal domain RPIC12D_RS09280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RPIC12D_RS09280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS09280 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain RPIC12D_RS09285 PF00378 Enoyl-CoA hydratase/isomerase RPIC12D_RS09310 PF03466 LysR substrate binding domain RPIC12D_RS09310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS09320 PF03466 LysR substrate binding domain RPIC12D_RS09320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS09330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS09330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC12D_RS09330 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC12D_RS09335 PF00043 Glutathione S-transferase, C-terminal domain RPIC12D_RS09335 PF02798 Glutathione S-transferase, N-terminal domain RPIC12D_RS09350 PF02492 CobW/HypB/UreG, nucleotide-binding domain RPIC12D_RS09355 PF01730 UreF RPIC12D_RS09360 PF05194 UreE urease accessory protein, C-terminal domain RPIC12D_RS09360 PF02814 UreE urease accessory protein, N-terminal domain RPIC12D_RS09370 PF00449 Urease alpha-subunit, N-terminal domain RPIC12D_RS09370 PF01979 Amidohydrolase family RPIC12D_RS09375 PF00699 Urease beta subunit RPIC12D_RS09385 PF00547 Urease, gamma subunit RPIC12D_RS09390 PF01774 UreD urease accessory protein RPIC12D_RS09395 PF00005 ABC transporter RPIC12D_RS09400 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPIC12D_RS09400 PF00005 ABC transporter RPIC12D_RS09405 PF02653 Branched-chain amino acid transport system / permease component RPIC12D_RS09410 PF02653 Branched-chain amino acid transport system / permease component RPIC12D_RS09420 PF01575 MaoC like domain RPIC12D_RS09425 PF00171 Aldehyde dehydrogenase family RPIC12D_RS09425 PF01575 MaoC like domain RPIC12D_RS09430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS09430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC12D_RS09430 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC12D_RS09435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS09435 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC12D_RS09435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC12D_RS09445 PF00293 NUDIX domain RPIC12D_RS09455 PF00361 Proton-conducting membrane transporter RPIC12D_RS09460 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus RPIC12D_RS09460 PF00361 Proton-conducting membrane transporter RPIC12D_RS09465 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RPIC12D_RS09465 PF00361 Proton-conducting membrane transporter RPIC12D_RS09470 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RPIC12D_RS09475 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RPIC12D_RS09480 PF12838 4Fe-4S dicluster domain RPIC12D_RS09485 PF00146 NADH dehydrogenase RPIC12D_RS09490 PF00384 Molybdopterin oxidoreductase RPIC12D_RS09490 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RPIC12D_RS09490 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal RPIC12D_RS09495 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RPIC12D_RS09495 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RPIC12D_RS09495 PF10531 SLBB domain RPIC12D_RS09505 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RPIC12D_RS09510 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RPIC12D_RS09515 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RPIC12D_RS09520 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RPIC12D_RS09530 PF03840 Preprotein translocase SecG subunit RPIC12D_RS09535 PF00121 Triosephosphate isomerase RPIC12D_RS09550 PF00013 KH domain RPIC12D_RS09550 PF01138 3' exoribonuclease family, domain 1 RPIC12D_RS09550 PF03725 3' exoribonuclease family, domain 2 RPIC12D_RS09550 PF00575 S1 RNA binding domain RPIC12D_RS09550 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RPIC12D_RS09555 PF00312 Ribosomal protein S15 RPIC12D_RS09560 PF13458 Periplasmic binding protein RPIC12D_RS09570 PF00682 HMGL-like RPIC12D_RS09570 PF08502 LeuA allosteric (dimerisation) domain RPIC12D_RS09575 PF01066 CDP-alcohol phosphatidyltransferase RPIC12D_RS09580 PF02666 Phosphatidylserine decarboxylase RPIC12D_RS09585 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RPIC12D_RS09585 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RPIC12D_RS09590 PF10369 Small subunit of acetolactate synthase RPIC12D_RS09595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPIC12D_RS09595 PF00205 Thiamine pyrophosphate enzyme, central domain RPIC12D_RS09595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPIC12D_RS09630 PF13439 Glycosyltransferase Family 4 RPIC12D_RS09630 PF00534 Glycosyl transferases group 1 RPIC12D_RS09635 PF01219 Prokaryotic diacylglycerol kinase RPIC12D_RS09640 PF00440 Bacterial regulatory proteins, tetR family RPIC12D_RS09640 PF08359 YsiA-like protein, C-terminal region RPIC12D_RS09645 PF03641 Possible lysine decarboxylase RPIC12D_RS09670 PF12849 PBP superfamily domain RPIC12D_RS09675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS09675 PF03466 LysR substrate binding domain RPIC12D_RS09680 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPIC12D_RS09680 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RPIC12D_RS09680 PF00111 2Fe-2S iron-sulfur cluster binding domain RPIC12D_RS09680 PF01799 [2Fe-2S] binding domain RPIC12D_RS09685 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RPIC12D_RS09685 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPIC12D_RS09695 PF00962 Adenosine/AMP deaminase RPIC12D_RS09700 PF01979 Amidohydrolase family RPIC12D_RS09705 PF01169 Uncharacterized protein family UPF0016 RPIC12D_RS09720 PF13296 Putative type VI secretion system Rhs element Vgr RPIC12D_RS09720 PF04717 Type VI secretion system, phage-baseplate injector RPIC12D_RS09720 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) RPIC12D_RS09735 PF00576 HIUase/Transthyretin family RPIC12D_RS09740 PF00392 Bacterial regulatory proteins, gntR family RPIC12D_RS09740 PF07729 FCD domain RPIC12D_RS09745 PF00860 Permease family RPIC12D_RS09750 PF01979 Amidohydrolase family RPIC12D_RS09760 PF09349 OHCU decarboxylase RPIC12D_RS09760 PF01014 Uricase RPIC12D_RS09765 PF13609 Gram-negative porin RPIC12D_RS09770 PF01515 Phosphate acetyl/butaryl transferase RPIC12D_RS09770 PF03949 Malic enzyme, NAD binding domain RPIC12D_RS09770 PF00390 Malic enzyme, N-terminal domain RPIC12D_RS09780 PF11940 Domain of unknown function (DUF3458) Ig-like fold RPIC12D_RS09780 PF01433 Peptidase family M1 domain RPIC12D_RS09780 PF17432 Domain of unknown function (DUF3458_C) ARM repeats RPIC12D_RS09785 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain RPIC12D_RS09795 PF01476 LysM domain RPIC12D_RS09795 PF04972 BON domain RPIC12D_RS09815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS09815 PF03466 LysR substrate binding domain RPIC12D_RS09825 PF03449 Transcription elongation factor, N-terminal RPIC12D_RS09825 PF01272 Transcription elongation factor, GreA/GreB, C-term RPIC12D_RS09845 PF13291 ACT domain RPIC12D_RS09845 PF04607 Region found in RelA / SpoT proteins RPIC12D_RS09845 PF02824 TGS domain RPIC12D_RS09855 PF01192 RNA polymerase Rpb6 RPIC12D_RS09860 PF00625 Guanylate kinase RPIC12D_RS09865 PF03755 YicC-like family, N-terminal region RPIC12D_RS09865 PF08340 Domain of unknown function (DUF1732) RPIC12D_RS09870 PF00069 Protein kinase domain RPIC12D_RS09870 PF08239 Bacterial SH3 domain RPIC12D_RS09880 PF01138 3' exoribonuclease family, domain 1 RPIC12D_RS09880 PF03725 3' exoribonuclease family, domain 2 RPIC12D_RS09885 PF01725 Ham1 family RPIC12D_RS09890 PF04055 Radical SAM superfamily RPIC12D_RS09890 PF06969 HemN C-terminal domain RPIC12D_RS09925 PF01470 Pyroglutamyl peptidase RPIC12D_RS09945 PF03746 LamB/YcsF family RPIC12D_RS09950 PF02626 Carboxyltransferase domain, subdomain A and B RPIC12D_RS09955 PF02682 Carboxyltransferase domain, subdomain C and D RPIC12D_RS09960 PF07690 Major Facilitator Superfamily RPIC12D_RS09965 PF00005 ABC transporter RPIC12D_RS09970 PF02653 Branched-chain amino acid transport system / permease component RPIC12D_RS09975 PF02653 Branched-chain amino acid transport system / permease component RPIC12D_RS09980 PF02608 ABC transporter substrate-binding protein PnrA-like RPIC12D_RS09990 PF00107 Zinc-binding dehydrogenase RPIC12D_RS09990 PF08240 Alcohol dehydrogenase GroES-like domain RPIC12D_RS09995 PF02142 MGS-like domain RPIC12D_RS10005 PF00892 EamA-like transporter family RPIC12D_RS10010 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RPIC12D_RS10020 PF05872 Bacterial protein of unknown function (DUF853) RPIC12D_RS10025 PF01709 Transcriptional regulator RPIC12D_RS10030 PF02844 Phosphoribosylglycinamide synthetase, N domain RPIC12D_RS10030 PF02843 Phosphoribosylglycinamide synthetase, C domain RPIC12D_RS10030 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RPIC12D_RS10035 PF01218 Coproporphyrinogen III oxidase RPIC12D_RS10040 PF01467 Cytidylyltransferase-like RPIC12D_RS10050 PF02590 Predicted SPOUT methyltransferase RPIC12D_RS10055 PF02545 Maf-like protein RPIC12D_RS10060 PF00575 S1 RNA binding domain RPIC12D_RS10060 PF10150 Ribonuclease E/G family RPIC12D_RS10065 PF07690 Major Facilitator Superfamily RPIC12D_RS10070 PF02558 Ketopantoate reductase PanE/ApbA RPIC12D_RS10070 PF08546 Ketopantoate reductase PanE/ApbA C terminal RPIC12D_RS10075 PF00171 Aldehyde dehydrogenase family RPIC12D_RS10080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPIC12D_RS10080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPIC12D_RS10080 PF00205 Thiamine pyrophosphate enzyme, central domain RPIC12D_RS10085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS10085 PF03466 LysR substrate binding domain RPIC12D_RS10095 PF00005 ABC transporter RPIC12D_RS10095 PF00664 ABC transporter transmembrane region RPIC12D_RS10105 PF00535 Glycosyl transferase family 2 RPIC12D_RS10110 PF00535 Glycosyl transferase family 2 RPIC12D_RS10120 PF13439 Glycosyltransferase Family 4 RPIC12D_RS10120 PF00534 Glycosyl transferases group 1 RPIC12D_RS10125 PF02811 PHP domain RPIC12D_RS10125 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RPIC12D_RS10125 PF14579 Helix-hairpin-helix motif RPIC12D_RS10125 PF01336 OB-fold nucleic acid binding domain RPIC12D_RS10125 PF07733 Bacterial DNA polymerase III alpha NTPase domain RPIC12D_RS10130 PF17773 UPF0176 acylphosphatase like domain RPIC12D_RS10135 PF03358 NADPH-dependent FMN reductase RPIC12D_RS10140 PF17954 Quercetinase C-terminal cupin domain RPIC12D_RS10140 PF02678 Pirin RPIC12D_RS10145 PF03466 LysR substrate binding domain RPIC12D_RS10145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS10150 PF00749 tRNA synthetases class I (E and Q), catalytic domain RPIC12D_RS10155 PF00270 DEAD/DEAH box helicase RPIC12D_RS10155 PF00271 Helicase conserved C-terminal domain RPIC12D_RS10160 PF01613 Flavin reductase like domain RPIC12D_RS10160 PF00258 Flavodoxin RPIC12D_RS10175 PF02785 Biotin carboxylase C-terminal domain RPIC12D_RS10175 PF00289 Biotin carboxylase, N-terminal domain RPIC12D_RS10175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPIC12D_RS10175 PF02436 Conserved carboxylase domain RPIC12D_RS10175 PF00364 Biotin-requiring enzyme RPIC12D_RS10175 PF00682 HMGL-like RPIC12D_RS10180 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RPIC12D_RS10180 PF10996 Beta-Casp domain RPIC12D_RS10180 PF00753 Metallo-beta-lactamase superfamily RPIC12D_RS10190 PF03922 OmpW family RPIC12D_RS10210 PF04542 Sigma-70 region 2 RPIC12D_RS10210 PF04545 Sigma-70, region 4 RPIC12D_RS10210 PF04546 Sigma-70, non-essential region RPIC12D_RS10210 PF04539 Sigma-70 region 3 RPIC12D_RS10210 PF00140 Sigma-70 factor, region 1.2 RPIC12D_RS10210 PF03979 Sigma-70 factor, region 1.1 RPIC12D_RS10215 PF01807 CHC2 zinc finger RPIC12D_RS10215 PF08275 DNA primase catalytic core, N-terminal domain RPIC12D_RS10215 PF08278 DNA primase DnaG DnaB-binding RPIC12D_RS10215 PF10410 DnaB-helicase binding domain of primase RPIC12D_RS10230 PF00814 Glycoprotease family RPIC12D_RS10235 PF02649 Type I GTP cyclohydrolase folE2 RPIC12D_RS10240 PF02780 Transketolase, C-terminal domain RPIC12D_RS10240 PF02779 Transketolase, pyrimidine binding domain RPIC12D_RS10240 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RPIC12D_RS10245 PF00348 Polyprenyl synthetase RPIC12D_RS10250 PF02609 Exonuclease VII small subunit RPIC12D_RS10265 PF00581 Rhodanese-like domain RPIC12D_RS10275 PF01738 Dienelactone hydrolase family RPIC12D_RS10280 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC12D_RS10285 PF01367 5'-3' exonuclease, C-terminal SAM fold RPIC12D_RS10285 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RPIC12D_RS10285 PF01612 3'-5' exonuclease RPIC12D_RS10285 PF00476 DNA polymerase family A RPIC12D_RS10290 PF03641 Possible lysine decarboxylase RPIC12D_RS10300 PF01636 Phosphotransferase enzyme family RPIC12D_RS10310 PF00580 UvrD/REP helicase N-terminal domain RPIC12D_RS10310 PF13361 UvrD-like helicase C-terminal domain RPIC12D_RS10315 PF08264 Anticodon-binding domain of tRNA RPIC12D_RS10315 PF10458 Valyl tRNA synthetase tRNA binding arm RPIC12D_RS10315 PF00133 tRNA synthetases class I (I, L, M and V) RPIC12D_RS10320 PF00483 Nucleotidyl transferase RPIC12D_RS10330 PF01176 Translation initiation factor 1A / IF-1 RPIC12D_RS10340 PF03537 Glycoside-hydrolase family GH114 RPIC12D_RS10345 PF01494 FAD binding domain RPIC12D_RS10350 PF03466 LysR substrate binding domain RPIC12D_RS10350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS10355 PF13458 Periplasmic binding protein RPIC12D_RS10360 PF00005 ABC transporter RPIC12D_RS10365 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPIC12D_RS10365 PF00005 ABC transporter RPIC12D_RS10380 PF02627 Carboxymuconolactone decarboxylase family RPIC12D_RS10385 PF12146 Serine aminopeptidase, S33 RPIC12D_RS10390 PF00206 Lyase RPIC12D_RS10390 PF10397 Adenylosuccinate lyase C-terminus RPIC12D_RS10395 PF00108 Thiolase, N-terminal domain RPIC12D_RS10395 PF02803 Thiolase, C-terminal domain RPIC12D_RS10400 PF01144 Coenzyme A transferase RPIC12D_RS10405 PF01144 Coenzyme A transferase RPIC12D_RS10410 PF01614 Bacterial transcriptional regulator RPIC12D_RS10410 PF09339 IclR helix-turn-helix domain RPIC12D_RS10420 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC12D_RS10425 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS10430 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS10435 PF00005 ABC transporter RPIC12D_RS10440 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC12D_RS10445 PF01266 FAD dependent oxidoreductase RPIC12D_RS10485 PF01595 Cyclin M transmembrane N-terminal domain RPIC12D_RS10485 PF03471 Transporter associated domain RPIC12D_RS10485 PF00571 CBS domain RPIC12D_RS10490 PF02627 Carboxymuconolactone decarboxylase family RPIC12D_RS10495 PF13411 MerR HTH family regulatory protein RPIC12D_RS10530 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPIC12D_RS10535 PF00158 Sigma-54 interaction domain RPIC12D_RS10535 PF01590 GAF domain RPIC12D_RS10535 PF02954 Bacterial regulatory protein, Fis family RPIC12D_RS10540 PF00561 alpha/beta hydrolase fold RPIC12D_RS10545 PF08042 PqqA family RPIC12D_RS10550 PF12706 Beta-lactamase superfamily domain RPIC12D_RS10555 PF03070 TENA/THI-4/PQQC family RPIC12D_RS10560 PF05402 Coenzyme PQQ synthesis protein D (PqqD) RPIC12D_RS10565 PF13186 Iron-sulfur cluster-binding domain RPIC12D_RS10565 PF04055 Radical SAM superfamily RPIC12D_RS10575 PF13360 PQQ-like domain RPIC12D_RS10575 PF01011 PQQ enzyme repeat RPIC12D_RS10595 PF00171 Aldehyde dehydrogenase family RPIC12D_RS10615 PF13609 Gram-negative porin RPIC12D_RS10620 PF01553 Acyltransferase RPIC12D_RS10650 PF16123 Hydroxyacylglutathione hydrolase C-terminus RPIC12D_RS10650 PF00753 Metallo-beta-lactamase superfamily RPIC12D_RS10660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPIC12D_RS10670 PF00732 GMC oxidoreductase RPIC12D_RS10670 PF05199 GMC oxidoreductase RPIC12D_RS10680 PF00034 Cytochrome c RPIC12D_RS10690 PF00115 Cytochrome C and Quinol oxidase polypeptide I RPIC12D_RS10700 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPIC12D_RS10700 PF00034 Cytochrome c RPIC12D_RS10705 PF02630 SCO1/SenC RPIC12D_RS10770 PF00239 Resolvase, N terminal domain RPIC12D_RS10770 PF02796 Helix-turn-helix domain of resolvase RPIC12D_RS10780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RPIC12D_RS10780 PF02403 Seryl-tRNA synthetase N-terminal domain RPIC12D_RS10785 PF16193 AAA C-terminal domain RPIC12D_RS10785 PF00004 ATPase family associated with various cellular activities (AAA) RPIC12D_RS10785 PF12002 MgsA AAA+ ATPase C terminal RPIC12D_RS10790 PF07690 Major Facilitator Superfamily RPIC12D_RS10790 PF00083 Sugar (and other) transporter RPIC12D_RS10795 PF00491 Arginase family RPIC12D_RS10800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS10800 PF03466 LysR substrate binding domain RPIC12D_RS10810 PF03548 Outer membrane lipoprotein carrier protein LolA RPIC12D_RS10815 PF17854 FtsK alpha domain RPIC12D_RS10815 PF09397 Ftsk gamma domain RPIC12D_RS10815 PF01580 FtsK/SpoIIIE family RPIC12D_RS10815 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RPIC12D_RS10820 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC12D_RS10825 PF01713 Smr domain RPIC12D_RS10825 PF00488 MutS domain V RPIC12D_RS10830 PF03458 UPF0126 domain RPIC12D_RS10835 PF00543 Nitrogen regulatory protein P-II RPIC12D_RS10840 PF01209 ubiE/COQ5 methyltransferase family RPIC12D_RS10845 PF00795 Carbon-nitrogen hydrolase RPIC12D_RS10845 PF02540 NAD synthase RPIC12D_RS10860 PF00719 Inorganic pyrophosphatase RPIC12D_RS10865 PF00171 Aldehyde dehydrogenase family RPIC12D_RS10875 PF07690 Major Facilitator Superfamily RPIC12D_RS10885 PF02602 Uroporphyrinogen-III synthase HemD RPIC12D_RS10890 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RPIC12D_RS10890 PF03900 Porphobilinogen deaminase, C-terminal domain RPIC12D_RS10895 PF00311 Phosphoenolpyruvate carboxylase RPIC12D_RS10900 PF07690 Major Facilitator Superfamily RPIC12D_RS10925 PF00206 Lyase RPIC12D_RS10925 PF14698 Argininosuccinate lyase C-terminal RPIC12D_RS10930 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RPIC12D_RS10930 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RPIC12D_RS10930 PF01276 Orn/Lys/Arg decarboxylase, major domain RPIC12D_RS10935 PF00692 dUTPase RPIC12D_RS10940 PF02634 FdhD/NarQ family RPIC12D_RS10945 PF00080 Copper/zinc superoxide dismutase (SODC) RPIC12D_RS10965 PF13247 4Fe-4S dicluster domain RPIC12D_RS10970 PF01568 Molydopterin dinucleotide binding domain RPIC12D_RS10970 PF00384 Molybdopterin oxidoreductase RPIC12D_RS10970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RPIC12D_RS11000 PF10609 NUBPL iron-transfer P-loop NTPase RPIC12D_RS11005 PF00691 OmpA family RPIC12D_RS11005 PF05736 OprF membrane domain RPIC12D_RS11010 PF01588 Putative tRNA binding domain RPIC12D_RS11010 PF09334 tRNA synthetases class I (M) RPIC12D_RS11020 PF04357 TamB, inner membrane protein subunit of TAM complex RPIC12D_RS11025 PF07244 Surface antigen variable number repeat RPIC12D_RS11025 PF01103 Surface antigen RPIC12D_RS11025 PF17243 POTRA domain TamA domain 1 RPIC12D_RS11035 PF02616 Segregation and condensation protein ScpA RPIC12D_RS11040 PF02569 Pantoate-beta-alanine ligase RPIC12D_RS11050 PF07685 CobB/CobQ-like glutamine amidotransferase domain RPIC12D_RS11050 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RPIC12D_RS11055 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RPIC12D_RS11060 PF03186 CobD/Cbib protein RPIC12D_RS11060 PF17113 Regulatory signalling modulator protein AmpE RPIC12D_RS11065 PF00155 Aminotransferase class I and II RPIC12D_RS11070 PF01497 Periplasmic binding protein RPIC12D_RS11075 PF13456 Reverse transcriptase-like RPIC12D_RS11075 PF00300 Histidine phosphatase superfamily (branch 1) RPIC12D_RS11080 PF02654 Cobalamin-5-phosphate synthase RPIC12D_RS11085 PF02277 Phosphoribosyltransferase RPIC12D_RS11090 PF12557 Cob(I)alamin adenosyltransferase N terminal RPIC12D_RS11090 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RPIC12D_RS11095 PF00005 ABC transporter RPIC12D_RS11100 PF01032 FecCD transport family RPIC12D_RS11105 PF07715 TonB-dependent Receptor Plug Domain RPIC12D_RS11105 PF00593 TonB dependent receptor RPIC12D_RS11130 PF01790 Prolipoprotein diacylglyceryl transferase RPIC12D_RS11135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS11135 PF03466 LysR substrate binding domain RPIC12D_RS11140 PF00920 Dehydratase family RPIC12D_RS11150 PF04364 DNA polymerase III chi subunit, HolC RPIC12D_RS11155 PF00883 Cytosol aminopeptidase family, catalytic domain RPIC12D_RS11155 PF02789 Cytosol aminopeptidase family, N-terminal domain RPIC12D_RS11180 PF14824 Sirohaem biosynthesis protein central RPIC12D_RS11180 PF10414 Sirohaem synthase dimerisation region RPIC12D_RS11180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPIC12D_RS11185 PF00009 Elongation factor Tu GTP binding domain RPIC12D_RS11190 PF01507 Phosphoadenosine phosphosulfate reductase family RPIC12D_RS11195 PF01507 Phosphoadenosine phosphosulfate reductase family RPIC12D_RS11205 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RPIC12D_RS11205 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RPIC12D_RS11210 PF01925 Sulfite exporter TauE/SafE RPIC12D_RS11215 PF03466 LysR substrate binding domain RPIC12D_RS11215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS11225 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RPIC12D_RS11225 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RPIC12D_RS11235 PF00589 Phage integrase family RPIC12D_RS11255 PF00182 Chitinase class I RPIC12D_RS11375 PF09979 Uncharacterized protein conserved in bacteria (DUF2213) RPIC12D_RS11450 PF03796 DnaB-like helicase C terminal domain RPIC12D_RS11450 PF00772 DnaB-like helicase N terminal domain RPIC12D_RS11560 PF00920 Dehydratase family RPIC12D_RS11565 PF00248 Aldo/keto reductase family RPIC12D_RS11570 PF07690 Major Facilitator Superfamily RPIC12D_RS11585 PF00990 Diguanylate cyclase, GGDEF domain RPIC12D_RS11595 PF00175 Oxidoreductase NAD-binding domain RPIC12D_RS11595 PF00111 2Fe-2S iron-sulfur cluster binding domain RPIC12D_RS11595 PF00970 Oxidoreductase FAD-binding domain RPIC12D_RS11600 PF00202 Aminotransferase class-III RPIC12D_RS11610 PF00005 ABC transporter RPIC12D_RS11615 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPIC12D_RS11615 PF00005 ABC transporter RPIC12D_RS11620 PF02653 Branched-chain amino acid transport system / permease component RPIC12D_RS11620 PF11862 Domain of unknown function (DUF3382) RPIC12D_RS11625 PF02653 Branched-chain amino acid transport system / permease component RPIC12D_RS11630 PF13458 Periplasmic binding protein RPIC12D_RS11635 PF02401 LytB protein RPIC12D_RS11640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RPIC12D_RS11645 PF04002 RadC-like JAB domain RPIC12D_RS11650 PF00830 Ribosomal L28 family RPIC12D_RS11655 PF00471 Ribosomal protein L33 RPIC12D_RS11660 PF00890 FAD binding domain RPIC12D_RS11660 PF02910 Fumarate reductase flavoprotein C-term RPIC12D_RS11665 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RPIC12D_RS11665 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RPIC12D_RS11670 PF02445 Quinolinate synthetase A protein RPIC12D_RS11680 PF12795 Mechanosensitive ion channel porin domain RPIC12D_RS11680 PF12794 Mechanosensitive ion channel inner membrane domain 1 RPIC12D_RS11680 PF00924 Mechanosensitive ion channel RPIC12D_RS11685 PF13091 PLD-like domain RPIC12D_RS11690 PF01029 NusB family RPIC12D_RS11690 PF01189 16S rRNA methyltransferase RsmB/F RPIC12D_RS11695 PF00551 Formyl transferase RPIC12D_RS11700 PF00196 Bacterial regulatory proteins, luxR family RPIC12D_RS11700 PF00072 Response regulator receiver domain RPIC12D_RS11705 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS11705 PF18415 Histidine kinase receptor ArcB trans-membrane domain RPIC12D_RS11705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS11710 PF06574 FAD synthetase RPIC12D_RS11710 PF01687 Riboflavin kinase RPIC12D_RS11715 PF06827 Zinc finger found in FPG and IleRS RPIC12D_RS11715 PF08264 Anticodon-binding domain of tRNA RPIC12D_RS11715 PF00133 tRNA synthetases class I (I, L, M and V) RPIC12D_RS11720 PF01252 Signal peptidase (SPase) II RPIC12D_RS11730 PF04127 DNA / pantothenate metabolism flavoprotein RPIC12D_RS11730 PF02441 Flavoprotein RPIC12D_RS11735 PF00296 Luciferase-like monooxygenase RPIC12D_RS11740 PF00692 dUTPase RPIC12D_RS11745 PF07724 AAA domain (Cdc48 subfamily) RPIC12D_RS11745 PF00004 ATPase family associated with various cellular activities (AAA) RPIC12D_RS11745 PF17871 AAA lid domain RPIC12D_RS11745 PF10431 C-terminal, D2-small domain, of ClpB protein RPIC12D_RS11745 PF02861 Clp amino terminal domain, pathogenicity island component RPIC12D_RS11750 PF02617 ATP-dependent Clp protease adaptor protein ClpS RPIC12D_RS11755 PF00313 'Cold-shock' DNA-binding domain RPIC12D_RS11765 PF00180 Isocitrate/isopropylmalate dehydrogenase RPIC12D_RS11785 PF00034 Cytochrome c RPIC12D_RS11785 PF03150 Di-haem cytochrome c peroxidase RPIC12D_RS11795 PF12706 Beta-lactamase superfamily domain RPIC12D_RS11800 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme RPIC12D_RS11805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS11805 PF03466 LysR substrate binding domain RPIC12D_RS11810 PF03466 LysR substrate binding domain RPIC12D_RS11810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS11815 PF07690 Major Facilitator Superfamily RPIC12D_RS11820 PF07681 DoxX RPIC12D_RS11825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS11825 PF03466 LysR substrate binding domain RPIC12D_RS11835 PF07690 Major Facilitator Superfamily RPIC12D_RS11845 PF00701 Dihydrodipicolinate synthetase family RPIC12D_RS11855 PF04228 Putative neutral zinc metallopeptidase RPIC12D_RS11865 PF06029 AlkA N-terminal domain RPIC12D_RS11865 PF02805 Metal binding domain of Ada RPIC12D_RS11865 PF00730 HhH-GPD superfamily base excision DNA repair protein RPIC12D_RS11865 PF12833 Helix-turn-helix domain RPIC12D_RS11870 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RPIC12D_RS11870 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RPIC12D_RS11890 PF07687 Peptidase dimerisation domain RPIC12D_RS11890 PF01546 Peptidase family M20/M25/M40 RPIC12D_RS11895 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC12D_RS11910 PF01966 HD domain RPIC12D_RS11910 PF11871 Domain of unknown function (DUF3391) RPIC12D_RS11915 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS11940 PF07690 Major Facilitator Superfamily RPIC12D_RS11950 PF00216 Bacterial DNA-binding protein RPIC12D_RS11960 PF00491 Arginase family RPIC12D_RS11965 PF00005 ABC transporter RPIC12D_RS11970 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS11975 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC12D_RS12005 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RPIC12D_RS12005 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RPIC12D_RS12010 PF02601 Exonuclease VII, large subunit RPIC12D_RS12010 PF13742 OB-fold nucleic acid binding domain RPIC12D_RS12015 PF01618 MotA/TolQ/ExbB proton channel family RPIC12D_RS12025 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RPIC12D_RS12030 PF03966 Trm112p-like protein RPIC12D_RS12035 PF02348 Cytidylyltransferase RPIC12D_RS12040 PF05191 Adenylate kinase, active site lid RPIC12D_RS12045 PF00106 short chain dehydrogenase RPIC12D_RS12050 PF03466 LysR substrate binding domain RPIC12D_RS12050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS12055 PF13593 SBF-like CPA transporter family (DUF4137) RPIC12D_RS12065 PF01520 N-acetylmuramoyl-L-alanine amidase RPIC12D_RS12065 PF11741 AMIN domain RPIC12D_RS12070 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RPIC12D_RS12075 PF08331 Domain of unknown function (DUF1730) RPIC12D_RS12085 PF03401 Tripartite tricarboxylate transporter family receptor RPIC12D_RS12090 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RPIC12D_RS12090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RPIC12D_RS12095 PF02899 Phage integrase, N-terminal SAM-like domain RPIC12D_RS12095 PF00589 Phage integrase family RPIC12D_RS12100 PF04073 Aminoacyl-tRNA editing domain RPIC12D_RS12105 PF02660 Glycerol-3-phosphate acyltransferase RPIC12D_RS12115 PF01804 Penicillin amidase RPIC12D_RS12120 PF04461 Protein of unknown function (DUF520) RPIC12D_RS12125 PF01565 FAD binding domain RPIC12D_RS12125 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RPIC12D_RS12130 PF06865 Pyrimidine/purine nucleoside phosphorylase RPIC12D_RS12135 PF00764 Arginosuccinate synthase RPIC12D_RS12140 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RPIC12D_RS12140 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RPIC12D_RS12150 PF01649 Ribosomal protein S20 RPIC12D_RS12155 PF03023 Lipid II flippase MurJ RPIC12D_RS12160 PF13369 Transglutaminase-like superfamily RPIC12D_RS12165 PF09335 SNARE associated Golgi protein RPIC12D_RS12170 PF08676 MutL C terminal dimerisation domain RPIC12D_RS12170 PF01119 DNA mismatch repair protein, C-terminal domain RPIC12D_RS12180 PF00583 Acetyltransferase (GNAT) family RPIC12D_RS12185 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA RPIC12D_RS12190 PF13532 2OG-Fe(II) oxygenase superfamily RPIC12D_RS12200 PF06796 Periplasmic nitrate reductase protein NapE RPIC12D_RS12210 PF01568 Molydopterin dinucleotide binding domain RPIC12D_RS12210 PF00384 Molybdopterin oxidoreductase RPIC12D_RS12210 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RPIC12D_RS12215 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) RPIC12D_RS12220 PF03264 NapC/NirT cytochrome c family, N-terminal region RPIC12D_RS12225 PF00005 ABC transporter RPIC12D_RS12230 PF03379 CcmB protein RPIC12D_RS12235 PF01578 Cytochrome C assembly protein RPIC12D_RS12240 PF03100 CcmE RPIC12D_RS12245 PF01578 Cytochrome C assembly protein RPIC12D_RS12245 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal RPIC12D_RS12250 PF08534 Redoxin RPIC12D_RS12255 PF03918 Cytochrome C biogenesis protein RPIC12D_RS12265 PF12833 Helix-turn-helix domain RPIC12D_RS12265 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RPIC12D_RS12265 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RPIC12D_RS12265 PF02805 Metal binding domain of Ada RPIC12D_RS12280 PF00586 AIR synthase related protein, N-terminal domain RPIC12D_RS12280 PF02769 AIR synthase related protein, C-terminal domain RPIC12D_RS12285 PF01594 AI-2E family transporter RPIC12D_RS12290 PF00308 Bacterial dnaA protein RPIC12D_RS12300 PF12627 Probable RNA and SrmB- binding site of polymerase A RPIC12D_RS12300 PF12626 Polymerase A arginine-rich C-terminus RPIC12D_RS12300 PF01743 Poly A polymerase head domain RPIC12D_RS12305 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RPIC12D_RS12315 PF02548 Ketopantoate hydroxymethyltransferase RPIC12D_RS12320 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS12325 PF08402 TOBE domain RPIC12D_RS12325 PF00005 ABC transporter RPIC12D_RS12330 PF04715 Anthranilate synthase component I, N terminal region RPIC12D_RS12330 PF00117 Glutamine amidotransferase class-I RPIC12D_RS12330 PF00425 chorismate binding enzyme RPIC12D_RS12335 PF00684 DnaJ central domain RPIC12D_RS12335 PF00226 DnaJ domain RPIC12D_RS12335 PF01556 DnaJ C terminal domain RPIC12D_RS12340 PF00012 Hsp70 protein RPIC12D_RS12345 PF02253 Phospholipase A1 RPIC12D_RS12350 PF14760 Rnk N-terminus RPIC12D_RS12350 PF01272 Transcription elongation factor, GreA/GreB, C-term RPIC12D_RS12360 PF01025 GrpE RPIC12D_RS12370 PF01479 S4 domain RPIC12D_RS12375 PF00762 Ferrochelatase RPIC12D_RS12380 PF01979 Amidohydrolase family RPIC12D_RS12385 PF00491 Arginase family RPIC12D_RS12390 PF00221 Aromatic amino acid lyase RPIC12D_RS12395 PF17391 Urocanase N-terminal domain RPIC12D_RS12395 PF17392 Urocanase C-terminal domain RPIC12D_RS12395 PF01175 Urocanase Rossmann-like domain RPIC12D_RS12400 PF07702 UTRA domain RPIC12D_RS12400 PF00392 Bacterial regulatory proteins, gntR family RPIC12D_RS12405 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS12410 PF00005 ABC transporter RPIC12D_RS12415 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RPIC12D_RS12420 PF01628 HrcA protein C terminal domain RPIC12D_RS12425 PF01513 ATP-NAD kinase RPIC12D_RS12430 PF02463 RecF/RecN/SMC N terminal domain RPIC12D_RS12440 PF00082 Subtilase family RPIC12D_RS12440 PF04151 Bacterial pre-peptidase C-terminal domain RPIC12D_RS12445 PF04151 Bacterial pre-peptidase C-terminal domain RPIC12D_RS12445 PF00082 Subtilase family RPIC12D_RS12455 PF08335 GlnD PII-uridylyltransferase RPIC12D_RS12455 PF03710 Glutamate-ammonia ligase adenylyltransferase RPIC12D_RS12465 PF00795 Carbon-nitrogen hydrolase RPIC12D_RS12470 PF01523 Putative modulator of DNA gyrase RPIC12D_RS12475 PF00793 DAHP synthetase I family RPIC12D_RS12480 PF05552 Conserved TM helix RPIC12D_RS12480 PF00924 Mechanosensitive ion channel RPIC12D_RS12485 PF01923 Cobalamin adenosyltransferase RPIC12D_RS12490 PF01565 FAD binding domain RPIC12D_RS12490 PF02913 FAD linked oxidases, C-terminal domain RPIC12D_RS12495 PF03466 LysR substrate binding domain RPIC12D_RS12495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS12500 PF02913 FAD linked oxidases, C-terminal domain RPIC12D_RS12500 PF01565 FAD binding domain RPIC12D_RS12505 PF01565 FAD binding domain RPIC12D_RS12510 PF13183 4Fe-4S dicluster domain RPIC12D_RS12510 PF02754 Cysteine-rich domain RPIC12D_RS12515 PF03788 LrgA family RPIC12D_RS12520 PF04172 LrgB-like family RPIC12D_RS12530 PF07883 Cupin domain RPIC12D_RS12540 PF00255 Glutathione peroxidase RPIC12D_RS12545 PF00437 Type II/IV secretion system protein RPIC12D_RS12550 PF00437 Type II/IV secretion system protein RPIC12D_RS12555 PF01168 Alanine racemase, N-terminal domain RPIC12D_RS12560 PF03807 NADP oxidoreductase coenzyme F420-dependent RPIC12D_RS12560 PF14748 Pyrroline-5-carboxylate reductase dimerisation RPIC12D_RS12565 PF01040 UbiA prenyltransferase family RPIC12D_RS12570 PF00141 Peroxidase RPIC12D_RS12575 PF00210 Ferritin-like domain RPIC12D_RS12585 PF02190 ATP-dependent protease La (LON) substrate-binding domain RPIC12D_RS12585 PF05362 Lon protease (S16) C-terminal proteolytic domain RPIC12D_RS12585 PF00004 ATPase family associated with various cellular activities (AAA) RPIC12D_RS12605 PF01726 LexA DNA binding domain RPIC12D_RS12605 PF00717 Peptidase S24-like RPIC12D_RS12655 PF01545 Cation efflux family RPIC12D_RS12655 PF16916 Dimerisation domain of Zinc Transporter RPIC12D_RS12660 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS12660 PF11808 Phosphate regulon sensor protein PhoR RPIC12D_RS12660 PF00989 PAS fold RPIC12D_RS12660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS12665 PF00486 Transcriptional regulatory protein, C terminal RPIC12D_RS12665 PF00072 Response regulator receiver domain RPIC12D_RS12670 PF00873 AcrB/AcrD/AcrF family RPIC12D_RS12675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RPIC12D_RS12680 PF02321 Outer membrane efflux protein RPIC12D_RS12710 PF02583 Metal-sensitive transcriptional repressor RPIC12D_RS12715 PF01545 Cation efflux family RPIC12D_RS12730 PF03466 LysR substrate binding domain RPIC12D_RS12730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS12735 PF00149 Calcineurin-like phosphoesterase RPIC12D_RS12740 PF03707 Bacterial signalling protein N terminal repeat RPIC12D_RS12740 PF00990 Diguanylate cyclase, GGDEF domain RPIC12D_RS12740 PF00563 EAL domain RPIC12D_RS12745 PF17191 RecG wedge domain RPIC12D_RS12745 PF00270 DEAD/DEAH box helicase RPIC12D_RS12745 PF00271 Helicase conserved C-terminal domain RPIC12D_RS12750 PF02547 Queuosine biosynthesis protein RPIC12D_RS12755 PF01702 Queuine tRNA-ribosyltransferase RPIC12D_RS12760 PF02699 Preprotein translocase subunit RPIC12D_RS12765 PF07549 SecD/SecF GG Motif RPIC12D_RS12765 PF13721 SecD export protein N-terminal TM region RPIC12D_RS12765 PF02355 Protein export membrane protein RPIC12D_RS12770 PF07549 SecD/SecF GG Motif RPIC12D_RS12770 PF02355 Protein export membrane protein RPIC12D_RS12780 PF04264 YceI-like domain RPIC12D_RS12785 PF01292 Prokaryotic cytochrome b561 RPIC12D_RS12790 PF00206 Lyase RPIC12D_RS12790 PF08328 Adenylosuccinate lyase C-terminal RPIC12D_RS12795 PF13417 Glutathione S-transferase, N-terminal domain RPIC12D_RS12795 PF00043 Glutathione S-transferase, C-terminal domain RPIC12D_RS12800 PF01645 Conserved region in glutamate synthase RPIC12D_RS12810 PF00293 NUDIX domain RPIC12D_RS12815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RPIC12D_RS12815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RPIC12D_RS12820 PF02261 Aspartate decarboxylase RPIC12D_RS12825 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch RPIC12D_RS12830 PF02233 NAD(P) transhydrogenase beta subunit RPIC12D_RS12835 PF00072 Response regulator receiver domain RPIC12D_RS12845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS12845 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS12850 PF00989 PAS fold RPIC12D_RS12850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS12850 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS12855 PF00158 Sigma-54 interaction domain RPIC12D_RS12855 PF00072 Response regulator receiver domain RPIC12D_RS12855 PF02954 Bacterial regulatory protein, Fis family RPIC12D_RS12860 PF02926 THUMP domain RPIC12D_RS12860 PF01170 Putative RNA methylase family UPF0020 RPIC12D_RS12865 PF03653 Uncharacterised protein family (UPF0093) RPIC12D_RS12870 PF00171 Aldehyde dehydrogenase family RPIC12D_RS12885 PF08264 Anticodon-binding domain of tRNA RPIC12D_RS12885 PF00133 tRNA synthetases class I (I, L, M and V) RPIC12D_RS12885 PF13603 Leucyl-tRNA synthetase, Domain 2 RPIC12D_RS12885 PF09334 tRNA synthetases class I (M) RPIC12D_RS12890 PF01113 Dihydrodipicolinate reductase, N-terminus RPIC12D_RS12890 PF05173 Dihydrodipicolinate reductase, C-terminus RPIC12D_RS12895 PF04355 SmpA / OmlA family RPIC12D_RS12900 PF01475 Ferric uptake regulator family RPIC12D_RS12905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS12905 PF03466 LysR substrate binding domain RPIC12D_RS12910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RPIC12D_RS12910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RPIC12D_RS12915 PF02779 Transketolase, pyrimidine binding domain RPIC12D_RS12915 PF02780 Transketolase, C-terminal domain RPIC12D_RS12915 PF00456 Transketolase, thiamine diphosphate binding domain RPIC12D_RS12920 PF13378 Enolase C-terminal domain-like RPIC12D_RS12920 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RPIC12D_RS12925 PF01081 KDPG and KHG aldolase RPIC12D_RS12940 PF08450 SMP-30/Gluconolactonase/LRE-like region RPIC12D_RS12945 PF02653 Branched-chain amino acid transport system / permease component RPIC12D_RS12950 PF00005 ABC transporter RPIC12D_RS12955 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RPIC12D_RS12965 PF13609 Gram-negative porin RPIC12D_RS12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS12970 PF03466 LysR substrate binding domain RPIC12D_RS12980 PF04452 RNA methyltransferase RPIC12D_RS12990 PF03466 LysR substrate binding domain RPIC12D_RS12990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS12995 PF00920 Dehydratase family RPIC12D_RS13000 PF00701 Dihydrodipicolinate synthetase family RPIC12D_RS13005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RPIC12D_RS13010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RPIC12D_RS13015 PF00005 ABC transporter RPIC12D_RS13020 PF02653 Branched-chain amino acid transport system / permease component RPIC12D_RS13035 PF00390 Malic enzyme, N-terminal domain RPIC12D_RS13035 PF03949 Malic enzyme, NAD binding domain RPIC12D_RS13035 PF01515 Phosphate acetyl/butaryl transferase RPIC12D_RS13040 PF02769 AIR synthase related protein, C-terminal domain RPIC12D_RS13040 PF00586 AIR synthase related protein, N-terminal domain RPIC12D_RS13045 PF04608 Phosphatidylglycerophosphatase A RPIC12D_RS13050 PF00994 Probable molybdopterin binding domain RPIC12D_RS13050 PF18146 Damage-inducible protein CinA KH domain RPIC12D_RS13050 PF02464 Competence-damaged protein RPIC12D_RS13060 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RPIC12D_RS13065 PF01544 CorA-like Mg2+ transporter protein RPIC12D_RS13070 PF00912 Transglycosylase RPIC12D_RS13075 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RPIC12D_RS13075 PF08501 Shikimate dehydrogenase substrate binding domain RPIC12D_RS13075 PF01488 Shikimate / quinate 5-dehydrogenase RPIC12D_RS13085 PF00773 RNB domain RPIC12D_RS13090 PF04345 Chorismate lyase RPIC12D_RS13095 PF05728 Uncharacterised protein family (UPF0227) RPIC12D_RS13100 PF01225 Mur ligase family, catalytic domain RPIC12D_RS13100 PF08245 Mur ligase middle domain RPIC12D_RS13100 PF02875 Mur ligase family, glutamate ligase domain RPIC12D_RS13110 PF00085 Thioredoxin RPIC12D_RS13115 PF01220 Dehydroquinase class II RPIC12D_RS13120 PF00364 Biotin-requiring enzyme RPIC12D_RS13125 PF02785 Biotin carboxylase C-terminal domain RPIC12D_RS13125 PF00289 Biotin carboxylase, N-terminal domain RPIC12D_RS13125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPIC12D_RS13140 PF08534 Redoxin RPIC12D_RS13145 PF00294 pfkB family carbohydrate kinase RPIC12D_RS13180 PF00672 HAMP domain RPIC12D_RS13180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC12D_RS13180 PF02203 Tar ligand binding domain homologue RPIC12D_RS13190 PF00892 EamA-like transporter family RPIC12D_RS13200 PF00268 Ribonucleotide reductase, small chain RPIC12D_RS13205 PF03477 ATP cone domain RPIC12D_RS13205 PF00317 Ribonucleotide reductase, all-alpha domain RPIC12D_RS13205 PF02867 Ribonucleotide reductase, barrel domain RPIC12D_RS13220 PF04185 Phosphoesterase family RPIC12D_RS13220 PF05506 Domain of unknown function (DUF756) RPIC12D_RS13225 PF01510 N-acetylmuramoyl-L-alanine amidase RPIC12D_RS13230 PF00158 Sigma-54 interaction domain RPIC12D_RS13230 PF00072 Response regulator receiver domain RPIC12D_RS13230 PF02954 Bacterial regulatory protein, Fis family RPIC12D_RS13235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS13235 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS13250 PF00448 SRP54-type protein, GTPase domain RPIC12D_RS13250 PF02881 SRP54-type protein, helical bundle domain RPIC12D_RS13250 PF02978 Signal peptide binding domain RPIC12D_RS13255 PF00156 Phosphoribosyl transferase domain RPIC12D_RS13260 PF01914 MarC family integral membrane protein RPIC12D_RS13270 PF01464 Transglycosylase SLT domain RPIC12D_RS13275 PF03129 Anticodon binding domain RPIC12D_RS13275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RPIC12D_RS13275 PF04073 Aminoacyl-tRNA editing domain RPIC12D_RS13280 PF00293 NUDIX domain RPIC12D_RS13290 PF01472 PUA domain RPIC12D_RS13290 PF00696 Amino acid kinase family RPIC12D_RS13295 PF01018 GTP1/OBG RPIC12D_RS13295 PF01926 50S ribosome-binding GTPase RPIC12D_RS13300 PF01016 Ribosomal L27 protein RPIC12D_RS13305 PF00829 Ribosomal prokaryotic L21 protein RPIC12D_RS13310 PF00348 Polyprenyl synthetase RPIC12D_RS13320 PF00589 Phage integrase family RPIC12D_RS13345 PF13361 UvrD-like helicase C-terminal domain RPIC12D_RS13345 PF00580 UvrD/REP helicase N-terminal domain RPIC12D_RS13365 PF03050 Transposase IS66 family RPIC12D_RS13365 PF13817 IS66 C-terminal element RPIC12D_RS13365 PF13005 zinc-finger binding domain of transposase IS66 RPIC12D_RS13365 PF13007 Transposase C of IS166 homeodomain RPIC12D_RS13370 PF12161 HsdM N-terminal domain RPIC12D_RS13370 PF02384 N-6 DNA Methylase RPIC12D_RS13375 PF18337 RapA N-terminal Tudor like domain RPIC12D_RS13375 PF18339 RapA N-terminal Tudor like domain 1 RPIC12D_RS13375 PF00176 SNF2 family N-terminal domain RPIC12D_RS13375 PF12137 RNA polymerase recycling family C-terminal RPIC12D_RS13375 PF00271 Helicase conserved C-terminal domain RPIC12D_RS13380 PF00270 DEAD/DEAH box helicase RPIC12D_RS13380 PF09369 Domain of unknown function (DUF1998) RPIC12D_RS13380 PF00271 Helicase conserved C-terminal domain RPIC12D_RS13495 PF01381 Helix-turn-helix RPIC12D_RS13525 PF01595 Cyclin M transmembrane N-terminal domain RPIC12D_RS13525 PF03471 Transporter associated domain RPIC12D_RS13525 PF00571 CBS domain RPIC12D_RS13530 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RPIC12D_RS13530 PF00437 Type II/IV secretion system protein RPIC12D_RS13535 PF00482 Type II secretion system (T2SS), protein F RPIC12D_RS13540 PF06750 Bacterial Peptidase A24 N-terminal domain RPIC12D_RS13540 PF01478 Type IV leader peptidase family RPIC12D_RS13545 PF01121 Dephospho-CoA kinase RPIC12D_RS13550 PF07072 Cell division protein RPIC12D_RS13555 PF03884 DNA gyrase inhibitor YacG RPIC12D_RS13560 PF00293 NUDIX domain RPIC12D_RS13570 PF01960 ArgJ family RPIC12D_RS13575 PF07516 SecA Wing and Scaffold domain RPIC12D_RS13575 PF02810 SEC-C motif RPIC12D_RS13575 PF01043 SecA preprotein cross-linking domain RPIC12D_RS13575 PF07517 SecA DEAD-like domain RPIC12D_RS13580 PF08525 Opacity-associated protein A N-terminal motif RPIC12D_RS13580 PF01551 Peptidase family M23 RPIC12D_RS13580 PF01476 LysM domain RPIC12D_RS13590 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RPIC12D_RS13595 PF08534 Redoxin RPIC12D_RS13600 PF12327 FtsZ family, C-terminal domain RPIC12D_RS13600 PF00091 Tubulin/FtsZ family, GTPase domain RPIC12D_RS13605 PF02491 SHS2 domain inserted in FTSA RPIC12D_RS13610 PF08478 POTRA domain, FtsQ-type RPIC12D_RS13610 PF03799 Cell division protein FtsQ RPIC12D_RS13615 PF01820 D-ala D-ala ligase N-terminus RPIC12D_RS13615 PF07478 D-ala D-ala ligase C-terminus RPIC12D_RS13620 PF02875 Mur ligase family, glutamate ligase domain RPIC12D_RS13620 PF08245 Mur ligase middle domain RPIC12D_RS13620 PF01225 Mur ligase family, catalytic domain RPIC12D_RS13625 PF04101 Glycosyltransferase family 28 C-terminal domain RPIC12D_RS13625 PF03033 Glycosyltransferase family 28 N-terminal domain RPIC12D_RS13630 PF01098 Cell cycle protein RPIC12D_RS13635 PF02875 Mur ligase family, glutamate ligase domain RPIC12D_RS13635 PF08245 Mur ligase middle domain RPIC12D_RS13640 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RPIC12D_RS13640 PF00953 Glycosyl transferase family 4 RPIC12D_RS13645 PF01225 Mur ligase family, catalytic domain RPIC12D_RS13645 PF08245 Mur ligase middle domain RPIC12D_RS13645 PF02875 Mur ligase family, glutamate ligase domain RPIC12D_RS13650 PF08245 Mur ligase middle domain RPIC12D_RS13650 PF02875 Mur ligase family, glutamate ligase domain RPIC12D_RS13655 PF00905 Penicillin binding protein transpeptidase domain RPIC12D_RS13655 PF03717 Penicillin-binding Protein dimerisation domain RPIC12D_RS13660 PF04999 Cell division protein FtsL RPIC12D_RS13665 PF01795 MraW methylase family RPIC12D_RS13670 PF02381 MraZ protein, putative antitoxin-like RPIC12D_RS13675 PF03232 Ubiquinone biosynthesis protein COQ7 RPIC12D_RS13680 PF13609 Gram-negative porin RPIC12D_RS13685 PF00083 Sugar (and other) transporter RPIC12D_RS13685 PF07690 Major Facilitator Superfamily RPIC12D_RS13690 PF03006 Haemolysin-III related RPIC12D_RS13695 PF13193 AMP-binding enzyme C-terminal domain RPIC12D_RS13695 PF00501 AMP-binding enzyme RPIC12D_RS13705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RPIC12D_RS13705 PF01568 Molydopterin dinucleotide binding domain RPIC12D_RS13705 PF00384 Molybdopterin oxidoreductase RPIC12D_RS13710 PF00356 Bacterial regulatory proteins, lacI family RPIC12D_RS13715 PF00381 PTS HPr component phosphorylation site RPIC12D_RS13715 PF05524 PEP-utilising enzyme, N-terminal RPIC12D_RS13715 PF02896 PEP-utilising enzyme, TIM barrel domain RPIC12D_RS13715 PF00391 PEP-utilising enzyme, mobile domain RPIC12D_RS13715 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RPIC12D_RS13720 PF00294 pfkB family carbohydrate kinase RPIC12D_RS13725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RPIC12D_RS13735 PF07687 Peptidase dimerisation domain RPIC12D_RS13735 PF01546 Peptidase family M20/M25/M40 RPIC12D_RS13740 PF07687 Peptidase dimerisation domain RPIC12D_RS13740 PF01546 Peptidase family M20/M25/M40 RPIC12D_RS13770 PF00378 Enoyl-CoA hydratase/isomerase RPIC12D_RS13775 PF00378 Enoyl-CoA hydratase/isomerase RPIC12D_RS13780 PF03061 Thioesterase superfamily RPIC12D_RS13785 PF14535 AMP-binding enzyme C-terminal domain RPIC12D_RS13785 PF00501 AMP-binding enzyme RPIC12D_RS13800 PF04379 ApaG domain RPIC12D_RS13805 PF00834 Ribulose-phosphate 3 epimerase family RPIC12D_RS13810 PF13419 Haloacid dehalogenase-like hydrolase RPIC12D_RS13815 PF00425 chorismate binding enzyme RPIC12D_RS13815 PF04715 Anthranilate synthase component I, N terminal region RPIC12D_RS13820 PF00117 Glutamine amidotransferase class-I RPIC12D_RS13830 PF00591 Glycosyl transferase family, a/b domain RPIC12D_RS13830 PF02885 Glycosyl transferase family, helical bundle domain RPIC12D_RS13835 PF00218 Indole-3-glycerol phosphate synthase RPIC12D_RS13845 PF03167 Uracil DNA glycosylase superfamily RPIC12D_RS13850 PF12805 FUSC-like inner membrane protein yccS RPIC12D_RS13860 PF08240 Alcohol dehydrogenase GroES-like domain RPIC12D_RS13860 PF00107 Zinc-binding dehydrogenase RPIC12D_RS13865 PF10411 Disulfide bond isomerase protein N-terminus RPIC12D_RS13865 PF13098 Thioredoxin-like domain RPIC12D_RS13870 PF01494 FAD binding domain RPIC12D_RS13885 PF01464 Transglycosylase SLT domain RPIC12D_RS13895 PF06071 Protein of unknown function (DUF933) RPIC12D_RS13895 PF01926 50S ribosome-binding GTPase RPIC12D_RS13920 PF00355 Rieske [2Fe-2S] domain RPIC12D_RS13925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RPIC12D_RS13925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RPIC12D_RS13930 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RPIC12D_RS13930 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RPIC12D_RS13940 PF13609 Gram-negative porin RPIC12D_RS13945 PF09084 NMT1/THI5 like RPIC12D_RS13950 PF07690 Major Facilitator Superfamily RPIC12D_RS13955 PF00970 Oxidoreductase FAD-binding domain RPIC12D_RS13955 PF00175 Oxidoreductase NAD-binding domain RPIC12D_RS13955 PF00111 2Fe-2S iron-sulfur cluster binding domain RPIC12D_RS13985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS13985 PF08446 PAS fold RPIC12D_RS13985 PF00360 Phytochrome region RPIC12D_RS13985 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS13985 PF01590 GAF domain RPIC12D_RS13990 PF00072 Response regulator receiver domain RPIC12D_RS13995 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RPIC12D_RS13995 PF00072 Response regulator receiver domain RPIC12D_RS13995 PF01627 Hpt domain RPIC12D_RS13995 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS13995 PF00672 HAMP domain RPIC12D_RS13995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS14005 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RPIC12D_RS14005 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RPIC12D_RS14005 PF01488 Shikimate / quinate 5-dehydrogenase RPIC12D_RS14010 PF00472 RF-1 domain RPIC12D_RS14010 PF03462 PCRF domain RPIC12D_RS14020 PF17827 PrmC N-terminal domain RPIC12D_RS14020 PF05175 Methyltransferase small domain RPIC12D_RS14025 PF00462 Glutaredoxin RPIC12D_RS14030 PF02441 Flavoprotein RPIC12D_RS14045 PF04349 Periplasmic glucan biosynthesis protein, MdoG RPIC12D_RS14050 PF00535 Glycosyl transferase family 2 RPIC12D_RS14070 PF00005 ABC transporter RPIC12D_RS14070 PF12848 ABC transporter RPIC12D_RS14075 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RPIC12D_RS14080 PF00510 Cytochrome c oxidase subunit III RPIC12D_RS14085 PF00115 Cytochrome C and Quinol oxidase polypeptide I RPIC12D_RS14090 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RPIC12D_RS14090 PF06481 COX Aromatic Rich Motif RPIC12D_RS14110 PF01527 Transposase RPIC12D_RS14115 PF13333 Integrase core domain RPIC12D_RS14115 PF00665 Integrase core domain RPIC12D_RS14115 PF13276 HTH-like domain RPIC12D_RS14270 PF00589 Phage integrase family RPIC12D_RS14280 PF04386 Stringent starvation protein B RPIC12D_RS14285 PF00043 Glutathione S-transferase, C-terminal domain RPIC12D_RS14285 PF02798 Glutathione S-transferase, N-terminal domain RPIC12D_RS14290 PF02167 Cytochrome C1 family RPIC12D_RS14295 PF00032 Cytochrome b(C-terminal)/b6/petD RPIC12D_RS14295 PF00033 Cytochrome b/b6/petB RPIC12D_RS14300 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal RPIC12D_RS14300 PF00355 Rieske [2Fe-2S] domain RPIC12D_RS14305 PF01741 Large-conductance mechanosensitive channel, MscL RPIC12D_RS14310 PF01784 NIF3 (NGG1p interacting factor 3) RPIC12D_RS14315 PF13180 PDZ domain RPIC12D_RS14315 PF17820 PDZ domain RPIC12D_RS14325 PF13609 Gram-negative porin RPIC12D_RS14335 PF00486 Transcriptional regulatory protein, C terminal RPIC12D_RS14335 PF00072 Response regulator receiver domain RPIC12D_RS14340 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS14340 PF08521 Two-component sensor kinase N-terminal RPIC12D_RS14340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS14355 PF00005 ABC transporter RPIC12D_RS14355 PF08402 TOBE domain RPIC12D_RS14360 PF00902 Sec-independent protein translocase protein (TatC) RPIC12D_RS14365 PF02416 mttA/Hcf106 family RPIC12D_RS14370 PF02416 mttA/Hcf106 family RPIC12D_RS14380 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RPIC12D_RS14385 PF01502 Phosphoribosyl-AMP cyclohydrolase RPIC12D_RS14390 PF00977 Histidine biosynthesis protein RPIC12D_RS14395 PF00977 Histidine biosynthesis protein RPIC12D_RS14400 PF00117 Glutamine amidotransferase class-I RPIC12D_RS14405 PF01914 MarC family integral membrane protein RPIC12D_RS14410 PF00475 Imidazoleglycerol-phosphate dehydratase RPIC12D_RS14415 PF00155 Aminotransferase class I and II RPIC12D_RS14420 PF00815 Histidinol dehydrogenase RPIC12D_RS14425 PF01634 ATP phosphoribosyltransferase RPIC12D_RS14430 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RPIC12D_RS14440 PF01061 ABC-2 type transporter RPIC12D_RS14445 PF00005 ABC transporter RPIC12D_RS14460 PF04333 MlaA lipoprotein RPIC12D_RS14465 PF02470 MlaD protein RPIC12D_RS14470 PF02405 Permease MlaE RPIC12D_RS14475 PF00005 ABC transporter RPIC12D_RS14480 PF03401 Tripartite tricarboxylate transporter family receptor RPIC12D_RS14485 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC12D_RS14485 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RPIC12D_RS14490 PF00310 Glutamine amidotransferases class-II RPIC12D_RS14490 PF01645 Conserved region in glutamate synthase RPIC12D_RS14490 PF04898 Glutamate synthase central domain RPIC12D_RS14490 PF01493 GXGXG motif RPIC12D_RS14500 PF03922 OmpW family RPIC12D_RS14505 PF13286 Phosphohydrolase-associated domain RPIC12D_RS14505 PF01966 HD domain RPIC12D_RS14510 PF01761 3-dehydroquinate synthase RPIC12D_RS14515 PF01202 Shikimate kinase RPIC12D_RS14520 PF07660 Secretin and TonB N terminus short domain RPIC12D_RS14520 PF00263 Bacterial type II and III secretion system protein RPIC12D_RS14520 PF11741 AMIN domain RPIC12D_RS14520 PF03958 Bacterial type II/III secretion system short domain RPIC12D_RS14535 PF05137 Fimbrial assembly protein (PilN) RPIC12D_RS14540 PF11104 Type IV pilus assembly protein PilM; RPIC12D_RS14545 PF00905 Penicillin binding protein transpeptidase domain RPIC12D_RS14545 PF00912 Transglycosylase RPIC12D_RS14545 PF17092 Penicillin-binding protein OB-like domain RPIC12D_RS14550 PF01491 Frataxin-like domain RPIC12D_RS14560 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RPIC12D_RS14560 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RPIC12D_RS14565 PF01794 Ferric reductase like transmembrane component RPIC12D_RS14570 PF00174 Oxidoreductase molybdopterin binding domain RPIC12D_RS14580 PF04542 Sigma-70 region 2 RPIC12D_RS14580 PF08281 Sigma-70, region 4 RPIC12D_RS14590 PF01578 Cytochrome C assembly protein RPIC12D_RS14595 PF05140 ResB-like family RPIC12D_RS14600 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPIC12D_RS14605 PF01926 50S ribosome-binding GTPase RPIC12D_RS14610 PF00490 Delta-aminolevulinic acid dehydratase RPIC12D_RS14615 PF02683 Cytochrome C biogenesis protein transmembrane region RPIC12D_RS14615 PF11412 Disulphide bond corrector protein DsbC RPIC12D_RS14625 PF01196 Ribosomal protein L17 RPIC12D_RS14630 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RPIC12D_RS14630 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RPIC12D_RS14630 PF01000 RNA polymerase Rpb3/RpoA insert domain RPIC12D_RS14635 PF01479 S4 domain RPIC12D_RS14635 PF00163 Ribosomal protein S4/S9 N-terminal domain RPIC12D_RS14640 PF00411 Ribosomal protein S11 RPIC12D_RS14645 PF00416 Ribosomal protein S13/S18 RPIC12D_RS14650 PF00444 Ribosomal protein L36 RPIC12D_RS14655 PF01176 Translation initiation factor 1A / IF-1 RPIC12D_RS14660 PF00344 SecY translocase RPIC12D_RS14665 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RPIC12D_RS14670 PF00327 Ribosomal protein L30p/L7e RPIC12D_RS14675 PF03719 Ribosomal protein S5, C-terminal domain RPIC12D_RS14675 PF00333 Ribosomal protein S5, N-terminal domain RPIC12D_RS14680 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RPIC12D_RS14685 PF00347 Ribosomal protein L6 RPIC12D_RS14690 PF00410 Ribosomal protein S8 RPIC12D_RS14695 PF00253 Ribosomal protein S14p/S29e RPIC12D_RS14700 PF00281 Ribosomal protein L5 RPIC12D_RS14700 PF00673 ribosomal L5P family C-terminus RPIC12D_RS14705 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RPIC12D_RS14710 PF00238 Ribosomal protein L14p/L23e RPIC12D_RS14715 PF00366 Ribosomal protein S17 RPIC12D_RS14720 PF00831 Ribosomal L29 protein RPIC12D_RS14725 PF00252 Ribosomal protein L16p/L10e RPIC12D_RS14730 PF07650 KH domain RPIC12D_RS14730 PF00189 Ribosomal protein S3, C-terminal domain RPIC12D_RS14735 PF00237 Ribosomal protein L22p/L17e RPIC12D_RS14740 PF00203 Ribosomal protein S19 RPIC12D_RS14745 PF00181 Ribosomal Proteins L2, RNA binding domain RPIC12D_RS14745 PF03947 Ribosomal Proteins L2, C-terminal domain RPIC12D_RS14750 PF00276 Ribosomal protein L23 RPIC12D_RS14755 PF00573 Ribosomal protein L4/L1 family RPIC12D_RS14760 PF00297 Ribosomal protein L3 RPIC12D_RS14765 PF00338 Ribosomal protein S10p/S20e RPIC12D_RS14770 PF00009 Elongation factor Tu GTP binding domain RPIC12D_RS14770 PF03143 Elongation factor Tu C-terminal domain RPIC12D_RS14770 PF03144 Elongation factor Tu domain 2 RPIC12D_RS14775 PF14492 Elongation Factor G, domain II RPIC12D_RS14775 PF03764 Elongation factor G, domain IV RPIC12D_RS14775 PF00679 Elongation factor G C-terminus RPIC12D_RS14775 PF00009 Elongation factor Tu GTP binding domain RPIC12D_RS14775 PF03144 Elongation factor Tu domain 2 RPIC12D_RS14780 PF00177 Ribosomal protein S7p/S5e RPIC12D_RS14785 PF00164 Ribosomal protein S12/S23 RPIC12D_RS14790 PF07690 Major Facilitator Superfamily RPIC12D_RS14795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS14795 PF03466 LysR substrate binding domain RPIC12D_RS14800 PF09382 RQC domain RPIC12D_RS14800 PF16124 RecQ zinc-binding RPIC12D_RS14800 PF00570 HRDC domain RPIC12D_RS14800 PF00271 Helicase conserved C-terminal domain RPIC12D_RS14800 PF00270 DEAD/DEAH box helicase RPIC12D_RS14810 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) RPIC12D_RS14815 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) RPIC12D_RS14820 PF10062 Predicted secreted protein (DUF2300) RPIC12D_RS14820 PF08486 Stage II sporulation protein RPIC12D_RS14825 PF00207 Alpha-2-macroglobulin family RPIC12D_RS14825 PF01835 MG2 domain RPIC12D_RS14825 PF07703 Alpha-2-macroglobulin bait region domain RPIC12D_RS14830 PF06672 Protein of unknown function (DUF1175) RPIC12D_RS14835 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) RPIC12D_RS14840 PF05000 RNA polymerase Rpb1, domain 4 RPIC12D_RS14840 PF04997 RNA polymerase Rpb1, domain 1 RPIC12D_RS14840 PF04998 RNA polymerase Rpb1, domain 5 RPIC12D_RS14840 PF00623 RNA polymerase Rpb1, domain 2 RPIC12D_RS14840 PF04983 RNA polymerase Rpb1, domain 3 RPIC12D_RS14845 PF04560 RNA polymerase Rpb2, domain 7 RPIC12D_RS14845 PF04561 RNA polymerase Rpb2, domain 2 RPIC12D_RS14845 PF04563 RNA polymerase beta subunit RPIC12D_RS14845 PF00562 RNA polymerase Rpb2, domain 6 RPIC12D_RS14845 PF10385 RNA polymerase beta subunit external 1 domain RPIC12D_RS14845 PF04565 RNA polymerase Rpb2, domain 3 RPIC12D_RS14850 PF00542 Ribosomal protein L7/L12 C-terminal domain RPIC12D_RS14850 PF16320 Ribosomal protein L7/L12 dimerisation domain RPIC12D_RS14855 PF00466 Ribosomal protein L10 RPIC12D_RS14860 PF00687 Ribosomal protein L1p/L10e family RPIC12D_RS14865 PF03946 Ribosomal protein L11, N-terminal domain RPIC12D_RS14865 PF00298 Ribosomal protein L11, RNA binding domain RPIC12D_RS14870 PF02357 Transcription termination factor nusG RPIC12D_RS14870 PF00467 KOW motif RPIC12D_RS14885 PF00009 Elongation factor Tu GTP binding domain RPIC12D_RS14885 PF03144 Elongation factor Tu domain 2 RPIC12D_RS14885 PF03143 Elongation factor Tu C-terminal domain RPIC12D_RS14905 PF03050 Transposase IS66 family RPIC12D_RS14905 PF13817 IS66 C-terminal element RPIC12D_RS14905 PF13007 Transposase C of IS166 homeodomain RPIC12D_RS14905 PF13005 zinc-finger binding domain of transposase IS66 RPIC12D_RS14950 PF08220 DeoR-like helix-turn-helix domain RPIC12D_RS14950 PF00455 DeoR C terminal sensor domain RPIC12D_RS14955 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RPIC12D_RS14955 PF01266 FAD dependent oxidoreductase RPIC12D_RS14960 PF17912 MalK OB fold domain RPIC12D_RS14960 PF00005 ABC transporter RPIC12D_RS14965 PF00005 ABC transporter RPIC12D_RS14965 PF17912 MalK OB fold domain RPIC12D_RS14970 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS14975 PF00528 Binding-protein-dependent transport system inner membrane component RPIC12D_RS14990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RPIC12D_RS14990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RPIC12D_RS15005 PF04349 Periplasmic glucan biosynthesis protein, MdoG RPIC12D_RS15015 PF07690 Major Facilitator Superfamily RPIC12D_RS15050 PF01380 SIS domain RPIC12D_RS15050 PF01418 Helix-turn-helix domain, rpiR family RPIC12D_RS15055 PF13609 Gram-negative porin RPIC12D_RS15060 PF00924 Mechanosensitive ion channel RPIC12D_RS15065 PF07690 Major Facilitator Superfamily RPIC12D_RS15100 PF01545 Cation efflux family RPIC12D_RS15100 PF16916 Dimerisation domain of Zinc Transporter RPIC12D_RS15105 PF00072 Response regulator receiver domain RPIC12D_RS15105 PF00196 Bacterial regulatory proteins, luxR family RPIC12D_RS15110 PF09456 RcsC Alpha-Beta-Loop (ABL) RPIC12D_RS15110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS15110 PF00072 Response regulator receiver domain RPIC12D_RS15110 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS15115 PF00743 Flavin-binding monooxygenase-like RPIC12D_RS15120 PF00106 short chain dehydrogenase RPIC12D_RS15125 PF00561 alpha/beta hydrolase fold RPIC12D_RS15135 PF13411 MerR HTH family regulatory protein RPIC12D_RS15155 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPIC12D_RS15165 PF00155 Aminotransferase class I and II RPIC12D_RS15170 PF01355 High potential iron-sulfur protein RPIC12D_RS15175 PF00072 Response regulator receiver domain RPIC12D_RS15175 PF00486 Transcriptional regulatory protein, C terminal RPIC12D_RS15180 PF03401 Tripartite tricarboxylate transporter family receptor RPIC12D_RS15185 PF13609 Gram-negative porin RPIC12D_RS15195 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPIC12D_RS15195 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RPIC12D_RS15200 PF00941 FAD binding domain in molybdopterin dehydrogenase RPIC12D_RS15200 PF03450 CO dehydrogenase flavoprotein C-terminal domain RPIC12D_RS15205 PF00111 2Fe-2S iron-sulfur cluster binding domain RPIC12D_RS15205 PF01799 [2Fe-2S] binding domain RPIC12D_RS15210 PF07687 Peptidase dimerisation domain RPIC12D_RS15210 PF01546 Peptidase family M20/M25/M40 RPIC12D_RS15220 PF02254 TrkA-N domain RPIC12D_RS15220 PF00999 Sodium/hydrogen exchanger family RPIC12D_RS15225 PF02525 Flavodoxin-like fold RPIC12D_RS15255 PF01037 Lrp/AsnC ligand binding domain RPIC12D_RS15260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPIC12D_RS15275 PF07963 Prokaryotic N-terminal methylation motif RPIC12D_RS15275 PF08334 Type II secretion system (T2SS), protein G RPIC12D_RS15285 PF02501 Type II secretion system (T2SS), protein I RPIC12D_RS15285 PF07963 Prokaryotic N-terminal methylation motif RPIC12D_RS15290 PF11612 Type II secretion system (T2SS), protein J RPIC12D_RS15290 PF07963 Prokaryotic N-terminal methylation motif RPIC12D_RS15315 PF00263 Bacterial type II and III secretion system protein RPIC12D_RS15315 PF03958 Bacterial type II/III secretion system short domain RPIC12D_RS15320 PF00437 Type II/IV secretion system protein RPIC12D_RS15325 PF00482 Type II secretion system (T2SS), protein F RPIC12D_RS15330 PF00665 Integrase core domain RPIC12D_RS15330 PF13936 Helix-turn-helix domain RPIC12D_RS15350 PF08411 Exonuclease C-terminal RPIC12D_RS15350 PF00929 Exonuclease RPIC12D_RS15355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RPIC12D_RS15355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RPIC12D_RS15365 PF13545 Crp-like helix-turn-helix domain RPIC12D_RS15365 PF00027 Cyclic nucleotide-binding domain RPIC12D_RS15375 PF13609 Gram-negative porin RPIC12D_RS15380 PF00072 Response regulator receiver domain RPIC12D_RS15380 PF00196 Bacterial regulatory proteins, luxR family RPIC12D_RS15385 PF02203 Tar ligand binding domain homologue RPIC12D_RS15385 PF00672 HAMP domain RPIC12D_RS15385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC12D_RS15400 PF00106 short chain dehydrogenase RPIC12D_RS15410 PF00072 Response regulator receiver domain RPIC12D_RS15410 PF00196 Bacterial regulatory proteins, luxR family RPIC12D_RS15415 PF13180 PDZ domain RPIC12D_RS15430 PF07690 Major Facilitator Superfamily RPIC12D_RS15435 PF01569 PAP2 superfamily RPIC12D_RS15445 PF17200 Single Cache domain 2 RPIC12D_RS15445 PF07730 Histidine kinase RPIC12D_RS15460 PF00118 TCP-1/cpn60 chaperonin family RPIC12D_RS15465 PF00166 Chaperonin 10 Kd subunit RPIC12D_RS15475 PF00011 Hsp20/alpha crystallin family RPIC12D_RS15480 PF00011 Hsp20/alpha crystallin family RPIC12D_RS15520 PF07859 alpha/beta hydrolase fold RPIC12D_RS15540 PF01047 MarR family RPIC12D_RS15545 PF02566 OsmC-like protein RPIC12D_RS15555 PF00012 Hsp70 protein RPIC12D_RS15565 PF00578 AhpC/TSA family RPIC12D_RS15640 PF13356 Arm DNA-binding domain RPIC12D_RS15640 PF00589 Phage integrase family RPIC12D_RS15650 PF00149 Calcineurin-like phosphoesterase RPIC12D_RS15650 PF02872 5'-nucleotidase, C-terminal domain RPIC12D_RS15690 PF00892 EamA-like transporter family RPIC12D_RS15695 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC12D_RS15695 PF10518 TAT (twin-arginine translocation) pathway signal sequence RPIC12D_RS15695 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding RPIC12D_RS15705 PF04972 BON domain RPIC12D_RS15710 PF02021 Uncharacterised protein family UPF0102 RPIC12D_RS15715 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPIC12D_RS15720 PF03330 Lytic transglycolase RPIC12D_RS15720 PF05036 Sporulation related domain RPIC12D_RS15725 PF00753 Metallo-beta-lactamase superfamily RPIC12D_RS15740 PF03960 ArsC family RPIC12D_RS15745 PF00872 Transposase, Mutator family RPIC12D_RS15750 PF07687 Peptidase dimerisation domain RPIC12D_RS15750 PF01546 Peptidase family M20/M25/M40 RPIC12D_RS15755 PF04115 Ureidoglycolate lyase RPIC12D_RS15760 PF03561 Allantoicase repeat RPIC12D_RS15765 PF00375 Sodium:dicarboxylate symporter family RPIC12D_RS15775 PF01205 Uncharacterized protein family UPF0029 RPIC12D_RS15775 PF09186 Domain of unknown function (DUF1949) RPIC12D_RS15785 PF03466 LysR substrate binding domain RPIC12D_RS15785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS15790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPIC12D_RS15790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPIC12D_RS15790 PF00205 Thiamine pyrophosphate enzyme, central domain RPIC12D_RS15795 PF01261 Xylose isomerase-like TIM barrel RPIC12D_RS15800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RPIC12D_RS15800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RPIC12D_RS15805 PF05161 MOFRL family RPIC12D_RS15805 PF13660 Domain of unknown function (DUF4147) RPIC12D_RS15810 PF00224 Pyruvate kinase, barrel domain RPIC12D_RS15810 PF02887 Pyruvate kinase, alpha/beta domain RPIC12D_RS15815 PF04055 Radical SAM superfamily RPIC12D_RS15815 PF06969 HemN C-terminal domain RPIC12D_RS15825 PF13361 UvrD-like helicase C-terminal domain RPIC12D_RS15825 PF00580 UvrD/REP helicase N-terminal domain RPIC12D_RS15840 PF01571 Aminomethyltransferase folate-binding domain RPIC12D_RS15840 PF08669 Glycine cleavage T-protein C-terminal barrel domain RPIC12D_RS15845 PF01597 Glycine cleavage H-protein RPIC12D_RS15850 PF02347 Glycine cleavage system P-protein RPIC12D_RS15860 PF03313 Serine dehydratase alpha chain RPIC12D_RS15860 PF03315 Serine dehydratase beta chain RPIC12D_RS15865 PF13936 Helix-turn-helix domain RPIC12D_RS15865 PF00665 Integrase core domain RPIC12D_RS15870 PF03169 OPT oligopeptide transporter protein RPIC12D_RS15880 PF04107 Glutamate-cysteine ligase family 2(GCS2) RPIC12D_RS15890 PF13458 Periplasmic binding protein RPIC12D_RS15895 PF01619 Proline dehydrogenase RPIC12D_RS15895 PF18327 Proline utilization A proline dehydrogenase N-terminal domain RPIC12D_RS15895 PF00171 Aldehyde dehydrogenase family RPIC12D_RS15895 PF14850 DNA-binding domain of Proline dehydrogenase RPIC12D_RS15900 PF00872 Transposase, Mutator family RPIC12D_RS15905 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RPIC12D_RS15905 PF18074 Primosomal protein N C-terminal domain RPIC12D_RS15905 PF17764 3′ DNA-binding domain (3′BD) RPIC12D_RS15905 PF00271 Helicase conserved C-terminal domain RPIC12D_RS15905 PF00270 DEAD/DEAH box helicase RPIC12D_RS15910 PF01208 Uroporphyrinogen decarboxylase (URO-D) RPIC12D_RS15920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC12D_RS15920 PF00672 HAMP domain RPIC12D_RS15920 PF02743 Cache domain RPIC12D_RS15925 PF04116 Fatty acid hydroxylase superfamily RPIC12D_RS15935 PF02798 Glutathione S-transferase, N-terminal domain RPIC12D_RS15935 PF00043 Glutathione S-transferase, C-terminal domain RPIC12D_RS15940 PF12849 PBP superfamily domain RPIC12D_RS15950 PF07859 alpha/beta hydrolase fold RPIC12D_RS15955 PF13380 CoA binding domain RPIC12D_RS15970 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain RPIC12D_RS15970 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RPIC12D_RS15975 PF02874 ATP synthase alpha/beta family, beta-barrel domain RPIC12D_RS15975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RPIC12D_RS15980 PF00231 ATP synthase RPIC12D_RS15985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RPIC12D_RS15985 PF02874 ATP synthase alpha/beta family, beta-barrel domain RPIC12D_RS15985 PF00306 ATP synthase alpha/beta chain, C terminal domain RPIC12D_RS15990 PF00213 ATP synthase delta (OSCP) subunit RPIC12D_RS15995 PF00430 ATP synthase B/B' CF(0) RPIC12D_RS16000 PF00137 ATP synthase subunit C RPIC12D_RS16005 PF00119 ATP synthase A chain RPIC12D_RS16015 PF17762 HTH domain found in ParB protein RPIC12D_RS16015 PF02195 ParB-like nuclease domain RPIC12D_RS16020 PF13614 AAA domain RPIC12D_RS16025 PF02527 rRNA small subunit methyltransferase G RPIC12D_RS16030 PF01134 Glucose inhibited division protein A RPIC12D_RS16030 PF13932 GidA associated domain RPIC12D_RS16050 PF12843 Putative quorum-sensing-regulated virulence factor RPIC12D_RS16055 PF03466 LysR substrate binding domain RPIC12D_RS16055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS16060 PF00106 short chain dehydrogenase RPIC12D_RS16070 PF03079 ARD/ARD' family RPIC12D_RS16075 PF01925 Sulfite exporter TauE/SafE RPIC12D_RS16095 PF02653 Branched-chain amino acid transport system / permease component RPIC12D_RS16105 PF00005 ABC transporter RPIC12D_RS16110 PF00005 ABC transporter RPIC12D_RS16110 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPIC12D_RS16115 PF05199 GMC oxidoreductase RPIC12D_RS16115 PF00732 GMC oxidoreductase RPIC12D_RS16120 PF12147 Putative methyltransferase RPIC12D_RS16120 PF12146 Serine aminopeptidase, S33 RPIC12D_RS16125 PF09278 MerR, DNA binding RPIC12D_RS16125 PF00376 MerR family regulatory protein RPIC12D_RS16130 PF00403 Heavy-metal-associated domain RPIC12D_RS16150 PF03922 OmpW family RPIC12D_RS16155 PF02423 Ornithine cyclodeaminase/mu-crystallin family RPIC12D_RS16160 PF07947 YhhN family RPIC12D_RS16165 PF01037 Lrp/AsnC ligand binding domain RPIC12D_RS16170 PF00351 Biopterin-dependent aromatic amino acid hydroxylase RPIC12D_RS16175 PF01329 Pterin 4 alpha carbinolamine dehydratase RPIC12D_RS16185 PF00486 Transcriptional regulatory protein, C terminal RPIC12D_RS16185 PF00072 Response regulator receiver domain RPIC12D_RS16190 PF08521 Two-component sensor kinase N-terminal RPIC12D_RS16190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS16190 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS16200 PF00216 Bacterial DNA-binding protein RPIC12D_RS16210 PF00596 Class II Aldolase and Adducin N-terminal domain RPIC12D_RS16215 PF02558 Ketopantoate reductase PanE/ApbA RPIC12D_RS16215 PF08546 Ketopantoate reductase PanE/ApbA C terminal RPIC12D_RS16220 PF08238 Sel1 repeat RPIC12D_RS16225 PF02872 5'-nucleotidase, C-terminal domain RPIC12D_RS16225 PF00149 Calcineurin-like phosphoesterase RPIC12D_RS16230 PF03775 Septum formation inhibitor MinC, C-terminal domain RPIC12D_RS16230 PF05209 Septum formation inhibitor MinC, N-terminal domain RPIC12D_RS16235 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RPIC12D_RS16240 PF03776 Septum formation topological specificity factor MinE RPIC12D_RS16245 PF00285 Citrate synthase, C-terminal domain RPIC12D_RS16250 PF02515 CoA-transferase family III RPIC12D_RS16255 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ RPIC12D_RS16260 PF03976 Polyphosphate kinase 2 (PPK2) RPIC12D_RS16265 PF01384 Phosphate transporter family RPIC12D_RS16270 PF00708 Acylphosphatase RPIC12D_RS16280 PF00005 ABC transporter RPIC12D_RS16285 PF05426 Alginate lyase RPIC12D_RS16295 PF09828 Chromate resistance exported protein RPIC12D_RS16300 PF02417 Chromate transporter RPIC12D_RS16320 PF01451 Low molecular weight phosphotyrosine protein phosphatase RPIC12D_RS16325 PF00230 Major intrinsic protein RPIC12D_RS16330 PF00561 alpha/beta hydrolase fold RPIC12D_RS16380 PF03814 Potassium-transporting ATPase A subunit RPIC12D_RS16390 PF02669 K+-transporting ATPase, c chain RPIC12D_RS16395 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS16395 PF13492 GAF domain RPIC12D_RS16395 PF13493 Domain of unknown function (DUF4118) RPIC12D_RS16395 PF02702 Osmosensitive K+ channel His kinase sensor domain RPIC12D_RS16395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS16400 PF03180 NLPA lipoprotein RPIC12D_RS16405 PF17154 Gammaproteobacterial periplasmic sensor domain RPIC12D_RS16405 PF00672 HAMP domain RPIC12D_RS16405 PF00563 EAL domain RPIC12D_RS16405 PF00990 Diguanylate cyclase, GGDEF domain RPIC12D_RS16410 PF00196 Bacterial regulatory proteins, luxR family RPIC12D_RS16410 PF00072 Response regulator receiver domain RPIC12D_RS16415 PF00230 Major intrinsic protein RPIC12D_RS16420 PF07690 Major Facilitator Superfamily RPIC12D_RS16430 PF00857 Isochorismatase family RPIC12D_RS16450 PF00072 Response regulator receiver domain RPIC12D_RS16450 PF00486 Transcriptional regulatory protein, C terminal RPIC12D_RS16455 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS16455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS16470 PF02082 Transcriptional regulator RPIC12D_RS16475 PF00175 Oxidoreductase NAD-binding domain RPIC12D_RS16475 PF00042 Globin RPIC12D_RS16475 PF00970 Oxidoreductase FAD-binding domain RPIC12D_RS16485 PF00155 Aminotransferase class I and II RPIC12D_RS16485 PF00392 Bacterial regulatory proteins, gntR family RPIC12D_RS16490 PF02627 Carboxymuconolactone decarboxylase family RPIC12D_RS16500 PF07690 Major Facilitator Superfamily RPIC12D_RS16505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS16505 PF03466 LysR substrate binding domain RPIC12D_RS16510 PF01118 Semialdehyde dehydrogenase, NAD binding domain RPIC12D_RS16515 PF05899 Protein of unknown function (DUF861) RPIC12D_RS16515 PF07883 Cupin domain RPIC12D_RS16520 PF13649 Methyltransferase domain RPIC12D_RS16525 PF03466 LysR substrate binding domain RPIC12D_RS16525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS16535 PF02583 Metal-sensitive transcriptional repressor RPIC12D_RS16545 PF08521 Two-component sensor kinase N-terminal RPIC12D_RS16545 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS16545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS16550 PF00486 Transcriptional regulatory protein, C terminal RPIC12D_RS16550 PF00072 Response regulator receiver domain RPIC12D_RS16600 PF03466 LysR substrate binding domain RPIC12D_RS16600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS16605 PF00732 GMC oxidoreductase RPIC12D_RS16605 PF05199 GMC oxidoreductase RPIC12D_RS16610 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC12D_RS16615 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC12D_RS16620 PF18158 Adaptive response protein AidB N-terminal domain RPIC12D_RS16620 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC12D_RS16620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS16625 PF03060 Nitronate monooxygenase RPIC12D_RS16630 PF01964 Radical SAM ThiC family RPIC12D_RS16630 PF13667 ThiC-associated domain RPIC12D_RS16635 PF01266 FAD dependent oxidoreductase RPIC12D_RS16645 PF05690 Thiazole biosynthesis protein ThiG RPIC12D_RS16650 PF02581 Thiamine monophosphate synthase RPIC12D_RS16655 PF06983 3-demethylubiquinone-9 3-methyltransferase RPIC12D_RS16680 PF08543 Phosphomethylpyrimidine kinase RPIC12D_RS16695 PF00245 Alkaline phosphatase RPIC12D_RS16700 PF00245 Alkaline phosphatase RPIC12D_RS16705 PF02463 RecF/RecN/SMC N terminal domain RPIC12D_RS16710 PF05221 S-adenosyl-L-homocysteine hydrolase RPIC12D_RS16710 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RPIC12D_RS16715 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV RPIC12D_RS16720 PF02219 Methylenetetrahydrofolate reductase RPIC12D_RS16735 PF01812 5-formyltetrahydrofolate cyclo-ligase family RPIC12D_RS16740 PF01464 Transglycosylase SLT domain RPIC12D_RS16740 PF14718 Soluble lytic murein transglycosylase L domain RPIC12D_RS16750 PF00043 Glutathione S-transferase, C-terminal domain RPIC12D_RS16750 PF13417 Glutathione S-transferase, N-terminal domain RPIC12D_RS16755 PF12627 Probable RNA and SrmB- binding site of polymerase A RPIC12D_RS16755 PF01743 Poly A polymerase head domain RPIC12D_RS16755 PF01966 HD domain RPIC12D_RS16760 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC12D_RS16765 PF05853 beta-keto acid cleavage enzyme RPIC12D_RS16770 PF00202 Aminotransferase class-III RPIC12D_RS16790 PF02954 Bacterial regulatory protein, Fis family RPIC12D_RS16790 PF00158 Sigma-54 interaction domain RPIC12D_RS16790 PF00072 Response regulator receiver domain RPIC12D_RS16795 PF00989 PAS fold RPIC12D_RS16795 PF00672 HAMP domain RPIC12D_RS16795 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS16795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS16805 PF01189 16S rRNA methyltransferase RsmB/F RPIC12D_RS16805 PF01029 NusB family RPIC12D_RS16810 PF01435 Peptidase family M48 RPIC12D_RS16815 PF01810 LysE type translocator RPIC12D_RS16820 PF02911 Formyl transferase, C-terminal domain RPIC12D_RS16820 PF00551 Formyl transferase RPIC12D_RS16830 PF01327 Polypeptide deformylase RPIC12D_RS16835 PF01476 LysM domain RPIC12D_RS16840 PF02481 DNA recombination-mediator protein A RPIC12D_RS16840 PF17782 DprA winged helix domain RPIC12D_RS16850 PF01751 Toprim domain RPIC12D_RS16850 PF01131 DNA topoisomerase RPIC12D_RS16855 PF03466 LysR substrate binding domain RPIC12D_RS16855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS16860 PF13193 AMP-binding enzyme C-terminal domain RPIC12D_RS16860 PF00501 AMP-binding enzyme RPIC12D_RS16865 PF01098 Cell cycle protein RPIC12D_RS16870 PF03717 Penicillin-binding Protein dimerisation domain RPIC12D_RS16870 PF00905 Penicillin binding protein transpeptidase domain RPIC12D_RS16880 PF04085 rod shape-determining protein MreC RPIC12D_RS16890 PF02686 Glu-tRNAGln amidotransferase C subunit RPIC12D_RS16895 PF01425 Amidase RPIC12D_RS16910 PF02637 GatB domain RPIC12D_RS16910 PF02934 GatB/GatE catalytic domain RPIC12D_RS16920 PF00589 Phage integrase family RPIC12D_RS16920 PF02899 Phage integrase, N-terminal SAM-like domain RPIC12D_RS16925 PF10672 S-adenosylmethionine-dependent methyltransferase RPIC12D_RS16925 PF17785 PUA-like domain RPIC12D_RS16935 PF08031 Berberine and berberine like RPIC12D_RS16935 PF01565 FAD binding domain RPIC12D_RS16940 PF10282 Lactonase, 7-bladed beta-propeller RPIC12D_RS16950 PF07683 Cobalamin synthesis protein cobW C-terminal domain RPIC12D_RS16950 PF02492 CobW/HypB/UreG, nucleotide-binding domain RPIC12D_RS16955 PF01258 Prokaryotic dksA/traR C4-type zinc finger RPIC12D_RS16960 PF02492 CobW/HypB/UreG, nucleotide-binding domain RPIC12D_RS16960 PF07683 Cobalamin synthesis protein cobW C-terminal domain RPIC12D_RS16965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RPIC12D_RS16970 PF00227 Proteasome subunit RPIC12D_RS16975 PF07724 AAA domain (Cdc48 subfamily) RPIC12D_RS16975 PF00004 ATPase family associated with various cellular activities (AAA) RPIC12D_RS16990 PF00072 Response regulator receiver domain RPIC12D_RS16995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS16995 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS17020 PF04542 Sigma-70 region 2 RPIC12D_RS17020 PF08281 Sigma-70, region 4 RPIC12D_RS17025 PF00696 Amino acid kinase family RPIC12D_RS17035 PF00440 Bacterial regulatory proteins, tetR family RPIC12D_RS17040 PF00392 Bacterial regulatory proteins, gntR family RPIC12D_RS17040 PF00155 Aminotransferase class I and II RPIC12D_RS17045 PF00202 Aminotransferase class-III RPIC12D_RS17050 PF00171 Aldehyde dehydrogenase family RPIC12D_RS17055 PF00561 alpha/beta hydrolase fold RPIC12D_RS17070 PF04328 Selenoprotein, putative RPIC12D_RS17075 PF02554 Carbon starvation protein CstA RPIC12D_RS17075 PF13722 5TM C-terminal transporter carbon starvation CstA RPIC12D_RS17080 PF17200 Single Cache domain 2 RPIC12D_RS17080 PF07730 Histidine kinase RPIC12D_RS17085 PF00196 Bacterial regulatory proteins, luxR family RPIC12D_RS17085 PF00072 Response regulator receiver domain RPIC12D_RS17090 PF01370 NAD dependent epimerase/dehydratase family RPIC12D_RS17095 PF07729 FCD domain RPIC12D_RS17095 PF00392 Bacterial regulatory proteins, gntR family RPIC12D_RS17100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RPIC12D_RS17100 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RPIC12D_RS17105 PF17042 Nucleotide-binding C-terminal domain RPIC12D_RS17105 PF07005 Sugar-binding N-terminal domain RPIC12D_RS17110 PF00596 Class II Aldolase and Adducin N-terminal domain RPIC12D_RS17115 PF07690 Major Facilitator Superfamily RPIC12D_RS17120 PF01261 Xylose isomerase-like TIM barrel RPIC12D_RS17130 PF00486 Transcriptional regulatory protein, C terminal RPIC12D_RS17130 PF00072 Response regulator receiver domain RPIC12D_RS17135 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain RPIC12D_RS17135 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain RPIC12D_RS17140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RPIC12D_RS17140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RPIC12D_RS17145 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RPIC12D_RS17150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RPIC12D_RS17150 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC12D_RS17160 PF00440 Bacterial regulatory proteins, tetR family RPIC12D_RS17160 PF08361 MAATS-type transcriptional repressor, C-terminal region RPIC12D_RS17165 PF00529 HlyD membrane-fusion protein of T1SS RPIC12D_RS17165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RPIC12D_RS17170 PF00873 AcrB/AcrD/AcrF family RPIC12D_RS17175 PF02321 Outer membrane efflux protein RPIC12D_RS17185 PF01165 Ribosomal protein S21 RPIC12D_RS17200 PF00293 NUDIX domain RPIC12D_RS17320 PF13356 Arm DNA-binding domain RPIC12D_RS17320 PF00589 Phage integrase family RPIC12D_RS17325 PF12631 MnmE helical domain RPIC12D_RS17325 PF01926 50S ribosome-binding GTPase RPIC12D_RS17325 PF10396 GTP-binding protein TrmE N-terminus RPIC12D_RS17335 PF02096 60Kd inner membrane protein RPIC12D_RS17335 PF14849 YidC periplasmic domain RPIC12D_RS17340 PF01809 Putative membrane protein insertion efficiency factor RPIC12D_RS17345 PF00825 Ribonuclease P RPIC12D_RS17350 PF00468 Ribosomal protein L34 RPIC12D_RS17365 PF08299 Bacterial dnaA protein helix-turn-helix RPIC12D_RS17365 PF11638 DnaA N-terminal domain RPIC12D_RS17365 PF00308 Bacterial dnaA protein RPIC12D_RS17525 PF00156 Phosphoribosyl transferase domain RPIC12D_RS17825 PF01642 Methylmalonyl-CoA mutase RPIC12D_RS17825 PF02310 B12 binding domain RPIC12D_RS17950 PF02785 Biotin carboxylase C-terminal domain RPIC12D_RS17950 PF18140 Propionyl-coenzyme A carboxylase BT domain RPIC12D_RS17950 PF00289 Biotin carboxylase, N-terminal domain RPIC12D_RS17950 PF00364 Biotin-requiring enzyme RPIC12D_RS17950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPIC12D_RS18040 PF03485 Arginyl tRNA synthetase N terminal domain RPIC12D_RS18040 PF00750 tRNA synthetases class I (R) RPIC12D_RS18040 PF05746 DALR anticodon binding domain RPIC12D_RS18175 PF05506 Domain of unknown function (DUF756) RPIC12D_RS18175 PF04185 Phosphoesterase family RPIC12D_RS18395 PF00909 Ammonium Transporter Family RPIC12D_RS18425 PF02896 PEP-utilising enzyme, TIM barrel domain RPIC12D_RS18425 PF00391 PEP-utilising enzyme, mobile domain RPIC12D_RS18425 PF05524 PEP-utilising enzyme, N-terminal RPIC12D_RS18430 PF02896 PEP-utilising enzyme, TIM barrel domain RPIC12D_RS18430 PF05524 PEP-utilising enzyme, N-terminal RPIC12D_RS18430 PF00391 PEP-utilising enzyme, mobile domain RPIC12D_RS18480 PF08241 Methyltransferase domain RPIC12D_RS18585 PF00005 ABC transporter RPIC12D_RS18745 PF04963 Sigma-54 factor, core binding domain RPIC12D_RS18745 PF04552 Sigma-54, DNA binding domain RPIC12D_RS18745 PF00309 Sigma-54 factor, Activator interacting domain (AID) RPIC12D_RS18800 PF00005 ABC transporter RPIC12D_RS18800 PF17755 UvrA DNA-binding domain RPIC12D_RS18800 PF17760 UvrA interaction domain RPIC12D_RS19015 PF03109 ABC1 family RPIC12D_RS19055 PF13091 PLD-like domain RPIC12D_RS19080 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS19080 PF00378 Enoyl-CoA hydratase/isomerase RPIC12D_RS19080 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RPIC12D_RS19115 PF00005 ABC transporter RPIC12D_RS19115 PF00664 ABC transporter transmembrane region RPIC12D_RS19295 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RPIC12D_RS19325 PF02091 Glycyl-tRNA synthetase alpha subunit RPIC12D_RS19595 PF00561 alpha/beta hydrolase fold RPIC12D_RS20105 PF00849 RNA pseudouridylate synthase RPIC12D_RS20105 PF01479 S4 domain RPIC12D_RS20120 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RPIC12D_RS20120 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RPIC12D_RS20170 PF02719 Polysaccharide biosynthesis protein RPIC12D_RS20235 PF03692 Putative zinc- or iron-chelating domain RPIC12D_RS20300 PF17862 AAA+ lid domain RPIC12D_RS20300 PF06480 FtsH Extracellular RPIC12D_RS20300 PF01434 Peptidase family M41 RPIC12D_RS20300 PF00004 ATPase family associated with various cellular activities (AAA) RPIC12D_RS20380 PF01751 Toprim domain RPIC12D_RS20380 PF01131 DNA topoisomerase RPIC12D_RS20395 PF01526 Tn3 transposase DDE domain RPIC12D_RS20395 PF13700 Domain of unknown function (DUF4158) RPIC12D_RS20665 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RPIC12D_RS20665 PF00925 GTP cyclohydrolase II RPIC12D_RS20870 PF00294 pfkB family carbohydrate kinase RPIC12D_RS21215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC12D_RS21215 PF03466 LysR substrate binding domain RPIC12D_RS21225 PF06779 Uncharacterised MFS-type transporter YbfB RPIC12D_RS21230 PF00596 Class II Aldolase and Adducin N-terminal domain RPIC12D_RS21275 PF00512 His Kinase A (phospho-acceptor) domain RPIC12D_RS21275 PF01627 Hpt domain RPIC12D_RS21275 PF00989 PAS fold RPIC12D_RS21275 PF00072 Response regulator receiver domain RPIC12D_RS21275 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC12D_RS21275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS21290 PF13953 PapC C-terminal domain RPIC12D_RS21290 PF13954 PapC N-terminal domain RPIC12D_RS21290 PF00577 Outer membrane usher protein RPIC12D_RS21520 PF00303 Thymidylate synthase RPIC12D_RS21545 PF00270 DEAD/DEAH box helicase RPIC12D_RS21545 PF00271 Helicase conserved C-terminal domain RPIC12D_RS21565 PF16326 ABC transporter C-terminal domain RPIC12D_RS21565 PF12848 ABC transporter RPIC12D_RS21565 PF00005 ABC transporter RPIC12D_RS21810 PF00005 ABC transporter RPIC12D_RS21840 PF00012 Hsp70 protein RPIC12D_RS21895 PF03454 MoeA C-terminal region (domain IV) RPIC12D_RS21895 PF03453 MoeA N-terminal region (domain I and II) RPIC12D_RS21895 PF00994 Probable molybdopterin binding domain RPIC12D_RS22160 PF07690 Major Facilitator Superfamily RPIC12D_RS22505 PF00588 SpoU rRNA Methylase family RPIC12D_RS22680 PF12705 PD-(D/E)XK nuclease superfamily RPIC12D_RS22680 PF00580 UvrD/REP helicase N-terminal domain RPIC12D_RS22680 PF13361 UvrD-like helicase C-terminal domain RPIC12D_RS22750 PF14765 Polyketide synthase dehydratase RPIC12D_RS22750 PF00550 Phosphopantetheine attachment site RPIC12D_RS22750 PF16197 Ketoacyl-synthetase C-terminal extension RPIC12D_RS22750 PF08240 Alcohol dehydrogenase GroES-like domain RPIC12D_RS22750 PF08659 KR domain RPIC12D_RS22750 PF00107 Zinc-binding dehydrogenase RPIC12D_RS22750 PF00109 Beta-ketoacyl synthase, N-terminal domain RPIC12D_RS22750 PF02801 Beta-ketoacyl synthase, C-terminal domain RPIC12D_RS22750 PF00698 Acyl transferase domain RPIC12D_RS22860 PF00923 Transaldolase/Fructose-6-phosphate aldolase RPIC12D_RS23000 PF00403 Heavy-metal-associated domain RPIC12D_RS23270 PF00308 Bacterial dnaA protein RPIC12D_RS23270 PF08299 Bacterial dnaA protein helix-turn-helix RPIC12D_RS23270 PF11638 DnaA N-terminal domain RPIC12D_RS23295 PF00204 DNA gyrase B RPIC12D_RS23295 PF18053 DNA gyrase B subunit insert domain RPIC12D_RS23295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS23295 PF01751 Toprim domain RPIC12D_RS23295 PF00986 DNA gyrase B subunit, carboxyl terminus RPIC12D_RS23480 PF00491 Arginase family RPIC12D_RS23685 PF02310 B12 binding domain RPIC12D_RS23685 PF01642 Methylmalonyl-CoA mutase RPIC12D_RS24200 PF00296 Luciferase-like monooxygenase RPIC12D_RS24320 PF04185 Phosphoesterase family RPIC12D_RS24320 PF05506 Domain of unknown function (DUF756) RPIC12D_RS24375 PF00375 Sodium:dicarboxylate symporter family RPIC12D_RS24605 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RPIC12D_RS24605 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RPIC12D_RS24760 PF00872 Transposase, Mutator family RPIC12D_RS24820 PF05193 Peptidase M16 inactive domain RPIC12D_RS24820 PF00675 Insulinase (Peptidase family M16) RPIC12D_RS24845 PF01467 Cytidylyltransferase-like RPIC12D_RS24940 PF00309 Sigma-54 factor, Activator interacting domain (AID) RPIC12D_RS24940 PF04552 Sigma-54, DNA binding domain RPIC12D_RS24940 PF04963 Sigma-54 factor, core binding domain RPIC12D_RS25260 PF02938 GAD domain RPIC12D_RS25260 PF01336 OB-fold nucleic acid binding domain RPIC12D_RS25260 PF00152 tRNA synthetases class II (D, K and N) RPIC12D_RS25315 PF16113 Enoyl-CoA hydratase/isomerase RPIC12D_RS25315 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RPIC12D_RS25315 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS25555 PF01118 Semialdehyde dehydrogenase, NAD binding domain RPIC12D_RS25560 PF01118 Semialdehyde dehydrogenase, NAD binding domain RPIC12D_RS25610 PF00202 Aminotransferase class-III RPIC12D_RS25770 PF00155 Aminotransferase class I and II RPIC12D_RS25770 PF00392 Bacterial regulatory proteins, gntR family RPIC12D_RS25850 PF01642 Methylmalonyl-CoA mutase RPIC12D_RS25850 PF02310 B12 binding domain RPIC12D_RS25915 PF07715 TonB-dependent Receptor Plug Domain RPIC12D_RS25915 PF00593 TonB dependent receptor RPIC12D_RS26135 PF00750 tRNA synthetases class I (R) RPIC12D_RS26135 PF03485 Arginyl tRNA synthetase N terminal domain RPIC12D_RS26135 PF05746 DALR anticodon binding domain RPIC12D_RS26140 PF03485 Arginyl tRNA synthetase N terminal domain RPIC12D_RS26140 PF05746 DALR anticodon binding domain RPIC12D_RS26140 PF00750 tRNA synthetases class I (R) RPIC12D_RS26380 PF01810 LysE type translocator RPIC12D_RS26535 PF00899 ThiF family RPIC12D_RS26880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC12D_RS26880 PF13426 PAS domain RPIC12D_RS26880 PF00072 Response regulator receiver domain RPIC12D_RS27065 PF07690 Major Facilitator Superfamily