RPIC12D_RS09265 5b195b42c678abe481a67d42d552a122 174 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 17 138 3.2E-8 T 22-04-2016 IPR002850 PIN family, putative toxin-antitoxin system toxin component RPIC12D_RS09265 5b195b42c678abe481a67d42d552a122 174 SMART SM00670 16 137 6.1E-4 T 22-04-2016 IPR002716 PIN domain RPIC12D_RS09265 5b195b42c678abe481a67d42d552a122 174 PANTHER PTHR34610 12 165 1.2E-22 T 22-04-2016 RPIC12D_RS09265 5b195b42c678abe481a67d42d552a122 174 Pfam PF13470 PIN domain 17 134 9.8E-30 T 22-04-2016 IPR002716 PIN domain RPIC12D_RS09265 5b195b42c678abe481a67d42d552a122 174 SUPERFAMILY SSF88723 17 138 2.69E-11 T 22-04-2016 IPR029060 PIN domain-like RPIC12D_RS09265 5b195b42c678abe481a67d42d552a122 174 PANTHER PTHR34610:SF3 12 165 1.2E-22 T 22-04-2016 RPIC12D_RS15660 b9803da3350058bbd3bea81d899cabca 220 Gene3D G3DSA:1.10.760.10 108 211 8.8E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS15660 b9803da3350058bbd3bea81d899cabca 220 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 134 213 2.3E-26 T 22-04-2016 IPR030999 Sulfur oxidation c-type cytochrome SoxX RPIC12D_RS15660 b9803da3350058bbd3bea81d899cabca 220 PIRSF PIRSF024608 4 220 4.6E-85 T 22-04-2016 IPR016823 Sulfur oxidation c-type cytochrome SoxX, type II RPIC12D_RS15660 b9803da3350058bbd3bea81d899cabca 220 SUPERFAMILY SSF46626 1 21 1.09E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS15660 b9803da3350058bbd3bea81d899cabca 220 SUPERFAMILY SSF46626 105 209 1.09E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS09685 8471a382302a99eeaece1fdd3b2ccd4f 788 Gene3D G3DSA:3.30.365.10 196 290 1.7E-32 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS09685 8471a382302a99eeaece1fdd3b2ccd4f 788 Gene3D G3DSA:3.30.365.10 469 637 8.1E-53 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS09685 8471a382302a99eeaece1fdd3b2ccd4f 788 SMART SM01008 41 148 5.2E-51 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC12D_RS09685 8471a382302a99eeaece1fdd3b2ccd4f 788 SUPERFAMILY SSF54665 24 149 2.88E-42 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC12D_RS09685 8471a382302a99eeaece1fdd3b2ccd4f 788 Gene3D G3DSA:3.30.365.10 292 367 7.0E-22 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS09685 8471a382302a99eeaece1fdd3b2ccd4f 788 Gene3D G3DSA:3.30.365.10 150 195 7.0E-22 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS09685 8471a382302a99eeaece1fdd3b2ccd4f 788 PANTHER PTHR11908 16 783 0.0 T 22-04-2016 RPIC12D_RS09685 8471a382302a99eeaece1fdd3b2ccd4f 788 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 27 782 0.0 T 22-04-2016 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 RPIC12D_RS09685 8471a382302a99eeaece1fdd3b2ccd4f 788 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 42 148 4.2E-28 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC12D_RS09685 8471a382302a99eeaece1fdd3b2ccd4f 788 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 169 711 5.1E-199 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS09685 8471a382302a99eeaece1fdd3b2ccd4f 788 Gene3D G3DSA:3.90.1170.50 26 148 3.1E-43 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC12D_RS09685 8471a382302a99eeaece1fdd3b2ccd4f 788 PANTHER PTHR11908:SF66 16 783 0.0 T 22-04-2016 RPIC12D_RS09685 8471a382302a99eeaece1fdd3b2ccd4f 788 Gene3D G3DSA:3.30.365.10 368 468 2.3E-87 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS09685 8471a382302a99eeaece1fdd3b2ccd4f 788 Gene3D G3DSA:3.30.365.10 638 779 2.3E-87 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS09685 8471a382302a99eeaece1fdd3b2ccd4f 788 SUPERFAMILY SSF56003 148 780 6.8E-205 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS04265 aa972ef199782024307f28785d5a5f94 310 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 309 1.6E-127 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 RPIC12D_RS04265 aa972ef199782024307f28785d5a5f94 310 Pfam PF00294 pfkB family carbohydrate kinase 13 301 1.8E-42 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB RPIC12D_RS04265 aa972ef199782024307f28785d5a5f94 310 SUPERFAMILY SSF53613 13 308 3.27E-58 T 22-04-2016 IPR029056 Ribokinase-like RPIC12D_RS04265 aa972ef199782024307f28785d5a5f94 310 Gene3D G3DSA:3.40.1190.20 13 308 2.9E-64 T 22-04-2016 IPR029056 Ribokinase-like RPIC12D_RS04265 aa972ef199782024307f28785d5a5f94 310 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 52 75 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RPIC12D_RS04265 aa972ef199782024307f28785d5a5f94 310 PANTHER PTHR10584:SF159 6 308 5.1E-116 T 22-04-2016 RPIC12D_RS04265 aa972ef199782024307f28785d5a5f94 310 PANTHER PTHR10584 6 308 5.1E-116 T 22-04-2016 RPIC12D_RS10225 3bc95b285c4c8255956560029118a7f1 407 Gene3D G3DSA:2.40.30.10 188 282 2.3E-28 T 22-04-2016 RPIC12D_RS10225 3bc95b285c4c8255956560029118a7f1 407 PANTHER PTHR10617:SF103 340 404 8.3E-108 T 22-04-2016 RPIC12D_RS10225 3bc95b285c4c8255956560029118a7f1 407 PANTHER PTHR10617:SF103 1 302 8.3E-108 T 22-04-2016 RPIC12D_RS10225 3bc95b285c4c8255956560029118a7f1 407 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 401 2.9E-121 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like RPIC12D_RS10225 3bc95b285c4c8255956560029118a7f1 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.7E-5 T 22-04-2016 RPIC12D_RS10225 3bc95b285c4c8255956560029118a7f1 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 379 2.7E-5 T 22-04-2016 RPIC12D_RS10225 3bc95b285c4c8255956560029118a7f1 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 2.7E-5 T 22-04-2016 RPIC12D_RS10225 3bc95b285c4c8255956560029118a7f1 407 SUPERFAMILY SSF160996 189 350 1.57E-38 T 22-04-2016 RPIC12D_RS10225 3bc95b285c4c8255956560029118a7f1 407 Pfam PF03486 HI0933-like protein 4 402 3.8E-145 T 22-04-2016 RPIC12D_RS10225 3bc95b285c4c8255956560029118a7f1 407 SUPERFAMILY SSF51905 347 404 2.95E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10225 3bc95b285c4c8255956560029118a7f1 407 SUPERFAMILY SSF51905 1 188 2.95E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10225 3bc95b285c4c8255956560029118a7f1 407 PANTHER PTHR10617 340 404 8.3E-108 T 22-04-2016 RPIC12D_RS10225 3bc95b285c4c8255956560029118a7f1 407 PANTHER PTHR10617 1 302 8.3E-108 T 22-04-2016 RPIC12D_RS10225 3bc95b285c4c8255956560029118a7f1 407 Gene3D G3DSA:3.50.50.60 1 186 3.6E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10225 3bc95b285c4c8255956560029118a7f1 407 Gene3D G3DSA:3.50.50.60 349 404 3.6E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10225 3bc95b285c4c8255956560029118a7f1 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 372 379 6.9E-6 T 22-04-2016 RPIC12D_RS10225 3bc95b285c4c8255956560029118a7f1 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 6.9E-6 T 22-04-2016 RPIC12D_RS10225 3bc95b285c4c8255956560029118a7f1 407 Gene3D G3DSA:1.10.8.260 284 331 5.4E-7 T 22-04-2016 IPR023166 HI0933 insert-like domain RPIC12D_RS05115 0fb849dbd93eadb2d34a01393065feee 107 PANTHER PTHR10245:SF49 15 81 2.0E-14 T 22-04-2016 RPIC12D_RS05115 0fb849dbd93eadb2d34a01393065feee 107 PANTHER PTHR10245 15 81 2.0E-14 T 22-04-2016 RPIC12D_RS05115 0fb849dbd93eadb2d34a01393065feee 107 Pfam PF01381 Helix-turn-helix 28 76 2.7E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC12D_RS05115 0fb849dbd93eadb2d34a01393065feee 107 SMART SM00530 24 79 6.0E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC12D_RS05115 0fb849dbd93eadb2d34a01393065feee 107 Gene3D G3DSA:1.10.260.40 14 82 2.6E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS05115 0fb849dbd93eadb2d34a01393065feee 107 SUPERFAMILY SSF47413 17 82 2.11E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS12180 5522921f6042e1bc195a76c75634f840 176 PANTHER PTHR10545 10 167 5.3E-68 T 22-04-2016 RPIC12D_RS12180 5522921f6042e1bc195a76c75634f840 176 Pfam PF00583 Acetyltransferase (GNAT) family 63 143 5.9E-19 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC12D_RS12180 5522921f6042e1bc195a76c75634f840 176 SUPERFAMILY SSF55729 10 156 1.5E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS12180 5522921f6042e1bc195a76c75634f840 176 Gene3D G3DSA:3.40.630.30 4 164 1.9E-62 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS00315 10612312b6000e5bf6ec56189ab21d44 822 Pfam PF05954 Phage late control gene D protein (GPD) 36 367 2.3E-83 T 22-04-2016 RPIC12D_RS00315 10612312b6000e5bf6ec56189ab21d44 822 SUPERFAMILY SSF69279 220 401 4.68E-37 T 22-04-2016 RPIC12D_RS00315 10612312b6000e5bf6ec56189ab21d44 822 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 26 531 8.3E-123 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RPIC12D_RS00315 10612312b6000e5bf6ec56189ab21d44 822 SUPERFAMILY SSF69255 401 486 5.75E-25 T 22-04-2016 RPIC12D_RS00315 10612312b6000e5bf6ec56189ab21d44 822 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 29 536 1.7E-111 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RPIC12D_RS00315 10612312b6000e5bf6ec56189ab21d44 822 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 509 617 7.2E-30 T 22-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain RPIC12D_RS00315 10612312b6000e5bf6ec56189ab21d44 822 Gene3D G3DSA:2.40.50.230 407 486 4.4E-29 T 22-04-2016 IPR006531 Gp5 N-terminal RPIC12D_RS00315 10612312b6000e5bf6ec56189ab21d44 822 Gene3D G3DSA:3.55.50.10 124 215 6.4E-28 T 22-04-2016 RPIC12D_RS00315 10612312b6000e5bf6ec56189ab21d44 822 SUPERFAMILY SSF69279 24 210 2.98E-45 T 22-04-2016 RPIC12D_RS00315 10612312b6000e5bf6ec56189ab21d44 822 SUPERFAMILY SSF69349 476 528 1.33E-9 T 22-04-2016 RPIC12D_RS00315 10612312b6000e5bf6ec56189ab21d44 822 PANTHER PTHR32305 8 528 1.9E-114 T 22-04-2016 RPIC12D_RS00315 10612312b6000e5bf6ec56189ab21d44 822 PANTHER PTHR32305 626 635 1.9E-114 T 22-04-2016 RPIC12D_RS00315 10612312b6000e5bf6ec56189ab21d44 822 PANTHER PTHR32305:SF9 8 528 1.9E-114 T 22-04-2016 RPIC12D_RS00315 10612312b6000e5bf6ec56189ab21d44 822 PANTHER PTHR32305:SF9 626 635 1.9E-114 T 22-04-2016 RPIC12D_RS00315 10612312b6000e5bf6ec56189ab21d44 822 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 643 792 6.6E-46 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal RPIC12D_RS16845 bbd423d8b1b11f86decd2481bad5ca7b 126 Gene3D G3DSA:3.40.30.10 17 83 3.6E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS16845 bbd423d8b1b11f86decd2481bad5ca7b 126 SUPERFAMILY SSF52833 17 99 7.0E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS16845 bbd423d8b1b11f86decd2481bad5ca7b 126 Pfam PF00085 Thioredoxin 22 84 1.9E-10 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RPIC12D_RS07750 24ebc9db58b28bede897c3c9fd2b7bd9 587 Gene3D G3DSA:1.20.140.10 284 454 5.7E-41 T 22-04-2016 RPIC12D_RS07750 24ebc9db58b28bede897c3c9fd2b7bd9 587 SUPERFAMILY SSF47203 294 454 2.42E-39 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS07750 24ebc9db58b28bede897c3c9fd2b7bd9 587 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 411 430 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RPIC12D_RS07750 24ebc9db58b28bede897c3c9fd2b7bd9 587 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 182 285 4.0E-15 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC12D_RS07750 24ebc9db58b28bede897c3c9fd2b7bd9 587 PANTHER PTHR10909:SF262 1 472 1.4E-174 T 22-04-2016 RPIC12D_RS07750 24ebc9db58b28bede897c3c9fd2b7bd9 587 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 296 452 5.1E-36 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS07750 24ebc9db58b28bede897c3c9fd2b7bd9 587 SUPERFAMILY SSF56645 87 305 3.66E-38 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC12D_RS07750 24ebc9db58b28bede897c3c9fd2b7bd9 587 Gene3D G3DSA:2.40.110.10 181 283 2.1E-19 T 22-04-2016 RPIC12D_RS07750 24ebc9db58b28bede897c3c9fd2b7bd9 587 PANTHER PTHR10909 1 472 1.4E-174 T 22-04-2016 RPIC12D_RS14475 fb9938624fff43219fa47ff31b70dab2 277 SUPERFAMILY SSF52540 9 239 2.28E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14475 fb9938624fff43219fa47ff31b70dab2 277 SMART SM00382 36 225 9.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS14475 fb9938624fff43219fa47ff31b70dab2 277 PANTHER PTHR24220:SF368 11 260 1.6E-132 T 22-04-2016 RPIC12D_RS14475 fb9938624fff43219fa47ff31b70dab2 277 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS14475 fb9938624fff43219fa47ff31b70dab2 277 Gene3D G3DSA:3.40.50.300 4 239 2.6E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14475 fb9938624fff43219fa47ff31b70dab2 277 Pfam PF00005 ABC transporter 29 176 4.8E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS14475 fb9938624fff43219fa47ff31b70dab2 277 PANTHER PTHR24220 11 260 1.6E-132 T 22-04-2016 RPIC12D_RS12295 69abd34137d9da18809bd7fc4284b3dd 224 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 195 1.3E-43 T 22-04-2016 RPIC12D_RS12295 69abd34137d9da18809bd7fc4284b3dd 224 PANTHER PTHR10000:SF10 1 223 1.1E-48 T 22-04-2016 RPIC12D_RS12295 69abd34137d9da18809bd7fc4284b3dd 224 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 207 1.9E-39 T 22-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial RPIC12D_RS12295 69abd34137d9da18809bd7fc4284b3dd 224 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 197 4.5E-22 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 RPIC12D_RS12295 69abd34137d9da18809bd7fc4284b3dd 224 PANTHER PTHR10000 1 223 1.1E-48 T 22-04-2016 RPIC12D_RS12295 69abd34137d9da18809bd7fc4284b3dd 224 Gene3D G3DSA:3.40.50.1000 81 223 3.0E-50 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS12295 69abd34137d9da18809bd7fc4284b3dd 224 SUPERFAMILY SSF56784 2 219 2.21E-33 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS12295 69abd34137d9da18809bd7fc4284b3dd 224 Gene3D G3DSA:1.20.1440.100 15 80 7.7E-36 T 22-04-2016 RPIC12D_RS01985 29cd47d18a4d6a781ffb6a3ae45ef91b 411 PANTHER PTHR13789:SF214 13 406 3.3E-85 T 22-04-2016 RPIC12D_RS01985 29cd47d18a4d6a781ffb6a3ae45ef91b 411 Gene3D G3DSA:3.50.50.60 12 200 4.5E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS01985 29cd47d18a4d6a781ffb6a3ae45ef91b 411 Gene3D G3DSA:3.50.50.60 302 340 4.5E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS01985 29cd47d18a4d6a781ffb6a3ae45ef91b 411 Pfam PF01494 FAD binding domain 14 349 1.1E-16 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 RPIC12D_RS01985 29cd47d18a4d6a781ffb6a3ae45ef91b 411 SUPERFAMILY SSF51905 13 197 5.01E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS01985 29cd47d18a4d6a781ffb6a3ae45ef91b 411 SUPERFAMILY SSF51905 300 406 5.01E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS01985 29cd47d18a4d6a781ffb6a3ae45ef91b 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 145 160 1.7E-13 T 22-04-2016 RPIC12D_RS01985 29cd47d18a4d6a781ffb6a3ae45ef91b 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 319 1.7E-13 T 22-04-2016 RPIC12D_RS01985 29cd47d18a4d6a781ffb6a3ae45ef91b 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 15 37 1.7E-13 T 22-04-2016 RPIC12D_RS01985 29cd47d18a4d6a781ffb6a3ae45ef91b 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 319 335 1.7E-13 T 22-04-2016 RPIC12D_RS01985 29cd47d18a4d6a781ffb6a3ae45ef91b 411 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 318 331 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 RPIC12D_RS01985 29cd47d18a4d6a781ffb6a3ae45ef91b 411 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 15 407 1.1E-127 T 22-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 RPIC12D_RS01985 29cd47d18a4d6a781ffb6a3ae45ef91b 411 PANTHER PTHR13789 13 406 3.3E-85 T 22-04-2016 RPIC12D_RS01985 29cd47d18a4d6a781ffb6a3ae45ef91b 411 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 15 406 5.3E-108 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 RPIC12D_RS18500 191d6b412ee8deca9335dde4707da60d 157 SUPERFAMILY SSF110111 87 157 7.59E-17 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain RPIC12D_RS18500 191d6b412ee8deca9335dde4707da60d 157 Gene3D G3DSA:2.60.370.10 87 157 1.1E-18 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain RPIC12D_RS18500 191d6b412ee8deca9335dde4707da60d 157 PANTHER PTHR21320 28 157 2.8E-12 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 RPIC12D_RS18500 191d6b412ee8deca9335dde4707da60d 157 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 60 157 9.6E-22 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 RPIC12D_RS18500 191d6b412ee8deca9335dde4707da60d 157 PANTHER PTHR21320:SF3 28 157 2.8E-12 T 22-04-2016 RPIC12D_RS00645 1a2c3838dcafe7561d541bbebbc740b4 201 PANTHER PTHR13887 4 196 2.4E-41 T 22-04-2016 RPIC12D_RS00645 1a2c3838dcafe7561d541bbebbc740b4 201 Pfam PF01323 DSBA-like thioredoxin domain 5 196 1.1E-37 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RPIC12D_RS00645 1a2c3838dcafe7561d541bbebbc740b4 201 SUPERFAMILY SSF52833 4 198 1.52E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS00645 1a2c3838dcafe7561d541bbebbc740b4 201 PIRSF PIRSF006386 1 200 1.2E-60 T 22-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa RPIC12D_RS00645 1a2c3838dcafe7561d541bbebbc740b4 201 Gene3D G3DSA:3.40.30.10 2 197 1.4E-57 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS07135 8a6c9160d5b925747f6a6cc179c18652 1011 Gene3D G3DSA:3.40.710.10 662 682 2.6E-18 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS07135 8a6c9160d5b925747f6a6cc179c18652 1011 Gene3D G3DSA:3.40.710.10 786 988 2.2E-21 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS07135 8a6c9160d5b925747f6a6cc179c18652 1011 Gene3D G3DSA:3.40.710.10 378 499 2.6E-18 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS07135 8a6c9160d5b925747f6a6cc179c18652 1011 Gene3D G3DSA:3.40.710.10 546 628 2.6E-18 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS07135 8a6c9160d5b925747f6a6cc179c18652 1011 SUPERFAMILY SSF56601 721 989 1.04E-23 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS07135 8a6c9160d5b925747f6a6cc179c18652 1011 Pfam PF00912 Transglycosylase 128 335 9.7E-29 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RPIC12D_RS07135 8a6c9160d5b925747f6a6cc179c18652 1011 SUPERFAMILY SSF53955 122 360 9.28E-12 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC12D_RS07135 8a6c9160d5b925747f6a6cc179c18652 1011 Gene3D G3DSA:1.10.3810.10 132 346 7.2E-10 T 22-04-2016 RPIC12D_RS07135 8a6c9160d5b925747f6a6cc179c18652 1011 SUPERFAMILY SSF56601 576 607 2.48E-7 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS07135 8a6c9160d5b925747f6a6cc179c18652 1011 SUPERFAMILY SSF56601 668 682 2.48E-7 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS07135 8a6c9160d5b925747f6a6cc179c18652 1011 SUPERFAMILY SSF56601 866 915 2.48E-7 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS07135 8a6c9160d5b925747f6a6cc179c18652 1011 SUPERFAMILY SSF56601 477 521 2.48E-7 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS23920 6183baff4b248d07dfd721f04f86eeac 207 PANTHER PTHR22855 130 207 7.4E-26 T 22-04-2016 RPIC12D_RS23920 6183baff4b248d07dfd721f04f86eeac 207 Gene3D G3DSA:3.90.226.10 158 206 1.8E-7 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS23920 6183baff4b248d07dfd721f04f86eeac 207 SUPERFAMILY SSF52096 150 206 2.18E-7 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS23920 6183baff4b248d07dfd721f04f86eeac 207 PANTHER PTHR22855:SF35 130 207 7.4E-26 T 22-04-2016 RPIC12D_RS03090 5824a726e8e1294a66b1c5dbe6b71ed6 295 Pfam PF10938 YfdX protein 64 201 1.5E-36 T 22-04-2016 IPR021236 Uncharacterised protein family YfdX RPIC12D_RS04925 176b0a459038a1f2f4c940f682954bdf 199 Gene3D G3DSA:1.10.10.10 127 189 9.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS04925 176b0a459038a1f2f4c940f682954bdf 199 SUPERFAMILY SSF88946 3 110 4.24E-33 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS04925 176b0a459038a1f2f4c940f682954bdf 199 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 191 3.3E-97 T 22-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS04925 176b0a459038a1f2f4c940f682954bdf 199 SUPERFAMILY SSF88659 125 187 2.24E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS04925 176b0a459038a1f2f4c940f682954bdf 199 PANTHER PTHR30173 1 188 1.2E-51 T 22-04-2016 RPIC12D_RS04925 176b0a459038a1f2f4c940f682954bdf 199 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS04925 176b0a459038a1f2f4c940f682954bdf 199 Pfam PF08281 Sigma-70, region 4 133 182 2.3E-18 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS04925 176b0a459038a1f2f4c940f682954bdf 199 PANTHER PTHR30173:SF1 1 188 1.2E-51 T 22-04-2016 RPIC12D_RS04925 176b0a459038a1f2f4c940f682954bdf 199 Gene3D G3DSA:1.10.1740.10 3 111 1.1E-38 T 22-04-2016 RPIC12D_RS04925 176b0a459038a1f2f4c940f682954bdf 199 Pfam PF04542 Sigma-70 region 2 25 92 2.5E-19 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS04925 176b0a459038a1f2f4c940f682954bdf 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 187 9.9E-34 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS06475 6acbe501226c149df6bdde4138c48521 420 PANTHER PTHR34220 177 387 6.9E-55 T 22-04-2016 RPIC12D_RS06475 6acbe501226c149df6bdde4138c48521 420 Pfam PF06580 Histidine kinase 188 267 8.1E-22 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 RPIC12D_RS06475 6acbe501226c149df6bdde4138c48521 420 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 288 382 1.5E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS06475 6acbe501226c149df6bdde4138c48521 420 SMART SM00387 282 383 5.5E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS06475 6acbe501226c149df6bdde4138c48521 420 SUPERFAMILY SSF55874 245 381 1.1E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS06475 6acbe501226c149df6bdde4138c48521 420 PANTHER PTHR34220:SF3 177 387 6.9E-55 T 22-04-2016 RPIC12D_RS06475 6acbe501226c149df6bdde4138c48521 420 Gene3D G3DSA:3.30.565.10 239 384 1.1E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS15285 6afdf3cbcbb8b09dcec131e646b7e7af 132 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 1.2E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS15285 6afdf3cbcbb8b09dcec131e646b7e7af 132 SUPERFAMILY SSF54523 45 124 1.31E-18 T 22-04-2016 RPIC12D_RS15285 6afdf3cbcbb8b09dcec131e646b7e7af 132 Pfam PF02501 Type II secretion system (T2SS), protein I 46 124 2.0E-21 T 22-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 RPIC12D_RS15285 6afdf3cbcbb8b09dcec131e646b7e7af 132 PANTHER PTHR38779 8 128 6.7E-23 T 22-04-2016 RPIC12D_RS15285 6afdf3cbcbb8b09dcec131e646b7e7af 132 PANTHER PTHR38779:SF1 8 128 6.7E-23 T 22-04-2016 RPIC12D_RS15285 6afdf3cbcbb8b09dcec131e646b7e7af 132 TIGRFAM TIGR01707 gspI: type II secretion system protein I 12 108 1.4E-22 T 22-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 RPIC12D_RS15285 6afdf3cbcbb8b09dcec131e646b7e7af 132 Pfam PF13633 Prokaryotic N-terminal methylation site 11 35 2.2E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS15285 6afdf3cbcbb8b09dcec131e646b7e7af 132 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS15285 6afdf3cbcbb8b09dcec131e646b7e7af 132 Gene3D G3DSA:3.30.1300.30 44 116 1.8E-8 T 22-04-2016 RPIC12D_RS04820 6988f82c69b7121c13be0906f532e3fe 333 Gene3D G3DSA:3.40.50.720 115 290 1.3E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS04820 6988f82c69b7121c13be0906f532e3fe 333 Gene3D G3DSA:3.40.50.720 2 114 2.7E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS04820 6988f82c69b7121c13be0906f532e3fe 333 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RPIC12D_RS04820 6988f82c69b7121c13be0906f532e3fe 333 SUPERFAMILY SSF52283 1 136 1.38E-31 T 22-04-2016 RPIC12D_RS04820 6988f82c69b7121c13be0906f532e3fe 333 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 287 1.6E-57 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RPIC12D_RS04820 6988f82c69b7121c13be0906f532e3fe 333 SUPERFAMILY SSF51735 101 288 9.88E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS04820 6988f82c69b7121c13be0906f532e3fe 333 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 311 4.3E-22 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RPIC12D_RS04820 6988f82c69b7121c13be0906f532e3fe 333 PANTHER PTHR10996 1 309 1.1E-114 T 22-04-2016 RPIC12D_RS06735 91ad2cbc54ebc96a7540d4ea2c7af14f 274 PANTHER PTHR10804:SF75 1 254 6.2E-142 T 22-04-2016 RPIC12D_RS06735 91ad2cbc54ebc96a7540d4ea2c7af14f 274 Pfam PF00557 Metallopeptidase family M24 13 247 1.0E-53 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC12D_RS06735 91ad2cbc54ebc96a7540d4ea2c7af14f 274 Hamap MF_01974 Methionine aminopeptidase [map]. 3 256 41.327 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RPIC12D_RS06735 91ad2cbc54ebc96a7540d4ea2c7af14f 274 Gene3D G3DSA:3.90.230.10 5 255 3.9E-97 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC12D_RS06735 91ad2cbc54ebc96a7540d4ea2c7af14f 274 PANTHER PTHR10804 1 254 6.2E-142 T 22-04-2016 RPIC12D_RS06735 91ad2cbc54ebc96a7540d4ea2c7af14f 274 SUPERFAMILY SSF55920 4 256 4.97E-90 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC12D_RS06735 91ad2cbc54ebc96a7540d4ea2c7af14f 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 198 210 2.5E-16 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RPIC12D_RS06735 91ad2cbc54ebc96a7540d4ea2c7af14f 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 2.5E-16 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RPIC12D_RS06735 91ad2cbc54ebc96a7540d4ea2c7af14f 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 167 179 2.5E-16 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RPIC12D_RS06735 91ad2cbc54ebc96a7540d4ea2c7af14f 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 2.5E-16 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RPIC12D_RS06735 91ad2cbc54ebc96a7540d4ea2c7af14f 274 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 254 3.5E-95 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RPIC12D_RS06735 91ad2cbc54ebc96a7540d4ea2c7af14f 274 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 173 191 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RPIC12D_RS00375 5423a86c3b29b2e6a7fcdb6eaf519efa 156 PANTHER PTHR36505 41 156 5.9E-46 T 22-04-2016 RPIC12D_RS00375 5423a86c3b29b2e6a7fcdb6eaf519efa 156 PANTHER PTHR36505:SF1 41 156 5.9E-46 T 22-04-2016 RPIC12D_RS00375 5423a86c3b29b2e6a7fcdb6eaf519efa 156 SUPERFAMILY SSF50346 29 154 1.41E-29 T 22-04-2016 IPR011033 PRC-barrel-like RPIC12D_RS00375 5423a86c3b29b2e6a7fcdb6eaf519efa 156 Gene3D G3DSA:2.30.30.240 43 102 1.1E-19 T 22-04-2016 RPIC12D_RS00375 5423a86c3b29b2e6a7fcdb6eaf519efa 156 Pfam PF05239 PRC-barrel domain 43 119 6.9E-18 T 22-04-2016 IPR027275 PRC-barrel domain RPIC12D_RS12645 d7bf6211688f0efbfa122452b011a87a 640 Pfam PF00665 Integrase core domain 241 378 1.4E-13 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC12D_RS12645 d7bf6211688f0efbfa122452b011a87a 640 Gene3D G3DSA:1.10.10.60 162 223 9.2E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS12645 d7bf6211688f0efbfa122452b011a87a 640 Pfam PF09299 Mu transposase, C-terminal 462 527 4.0E-11 T 22-04-2016 IPR015378 Transposase-like, Mu, C-terminal RPIC12D_RS12645 d7bf6211688f0efbfa122452b011a87a 640 Gene3D G3DSA:3.30.420.10 238 432 3.2E-23 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS12645 d7bf6211688f0efbfa122452b011a87a 640 SUPERFAMILY SSF53098 236 433 1.67E-18 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS07770 02a4696424169492ed211236771e510c 203 Gene3D G3DSA:1.20.120.80 21 200 1.4E-50 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 RPIC12D_RS07770 02a4696424169492ed211236771e510c 203 SUPERFAMILY SSF81452 18 200 6.15E-57 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RPIC12D_RS07770 02a4696424169492ed211236771e510c 203 PANTHER PTHR11403:SF2 23 203 1.3E-94 T 22-04-2016 RPIC12D_RS07770 02a4696424169492ed211236771e510c 203 PANTHER PTHR11403 23 203 1.3E-94 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 RPIC12D_RS07770 02a4696424169492ed211236771e510c 203 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 23 201 1.3E-80 T 22-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 RPIC12D_RS07770 02a4696424169492ed211236771e510c 203 Pfam PF00510 Cytochrome c oxidase subunit III 14 200 3.8E-16 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RPIC12D_RS02320 a0ff10ee528b7147a6cbe773dfd4c676 590 Pfam PF04932 O-Antigen ligase 202 352 7.9E-13 T 22-04-2016 IPR007016 O-antigen ligase-related RPIC12D_RS02320 a0ff10ee528b7147a6cbe773dfd4c676 590 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 374 537 5.6E-27 T 22-04-2016 IPR021797 Virulence factor membrane-bound polymerase, C-terminal RPIC12D_RS02320 a0ff10ee528b7147a6cbe773dfd4c676 590 Pfam PF15864 Protein glycosylation ligase 163 188 6.3E-8 T 22-04-2016 IPR031726 Protein glycosylation ligase domain RPIC12D_RS15425 ba2c0453746045a7288e74b03f068618 202 PANTHER PTHR30328 9 192 2.4E-30 T 22-04-2016 RPIC12D_RS15425 ba2c0453746045a7288e74b03f068618 202 PANTHER PTHR30328:SF19 9 192 2.4E-30 T 22-04-2016 RPIC12D_RS15425 ba2c0453746045a7288e74b03f068618 202 Gene3D G3DSA:1.10.10.60 3 61 1.4E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS15425 ba2c0453746045a7288e74b03f068618 202 Gene3D G3DSA:1.10.357.10 62 198 2.1E-40 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC12D_RS15425 ba2c0453746045a7288e74b03f068618 202 SUPERFAMILY SSF48498 85 194 1.36E-22 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC12D_RS15425 ba2c0453746045a7288e74b03f068618 202 SUPERFAMILY SSF46689 6 89 2.15E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS05340 ae1de78eb5b6a658881c5fc426de5f05 553 Gene3D G3DSA:3.40.50.300 1 288 7.8E-132 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05340 ae1de78eb5b6a658881c5fc426de5f05 553 PANTHER PTHR11550 1 547 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RPIC12D_RS05340 ae1de78eb5b6a658881c5fc426de5f05 553 Pfam PF06418 CTP synthase N-terminus 3 270 3.1E-124 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RPIC12D_RS05340 ae1de78eb5b6a658881c5fc426de5f05 553 Gene3D G3DSA:3.40.50.880 291 546 1.3E-99 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS05340 ae1de78eb5b6a658881c5fc426de5f05 553 SUPERFAMILY SSF52317 292 546 8.2E-86 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS05340 ae1de78eb5b6a658881c5fc426de5f05 553 Hamap MF_01227 CTP synthase [pyrG]. 2 545 51.005 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RPIC12D_RS05340 ae1de78eb5b6a658881c5fc426de5f05 553 SUPERFAMILY SSF52540 2 270 1.06E-118 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05340 ae1de78eb5b6a658881c5fc426de5f05 553 TIGRFAM TIGR00337 PyrG: CTP synthase 1 540 3.1E-238 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RPIC12D_RS05340 ae1de78eb5b6a658881c5fc426de5f05 553 Pfam PF00117 Glutamine amidotransferase class-I 305 539 2.4E-55 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RPIC12D_RS11890 06a5ed1d4321265a9611cab7ea057561 470 SUPERFAMILY SSF53187 362 463 9.43E-73 T 22-04-2016 RPIC12D_RS11890 06a5ed1d4321265a9611cab7ea057561 470 SUPERFAMILY SSF53187 60 260 9.43E-73 T 22-04-2016 RPIC12D_RS11890 06a5ed1d4321265a9611cab7ea057561 470 Pfam PF01546 Peptidase family M20/M25/M40 126 416 2.1E-23 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC12D_RS11890 06a5ed1d4321265a9611cab7ea057561 470 Gene3D G3DSA:3.30.70.360 245 361 5.8E-34 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS11890 06a5ed1d4321265a9611cab7ea057561 470 PIRSF PIRSF005962 54 466 9.3E-95 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RPIC12D_RS11890 06a5ed1d4321265a9611cab7ea057561 470 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 74 419 2.4E-83 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RPIC12D_RS11890 06a5ed1d4321265a9611cab7ea057561 470 SUPERFAMILY SSF55031 247 347 5.36E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS11890 06a5ed1d4321265a9611cab7ea057561 470 Gene3D G3DSA:3.40.630.10 362 463 4.4E-85 T 22-04-2016 RPIC12D_RS11890 06a5ed1d4321265a9611cab7ea057561 470 Gene3D G3DSA:3.40.630.10 52 241 4.4E-85 T 22-04-2016 RPIC12D_RS11890 06a5ed1d4321265a9611cab7ea057561 470 PANTHER PTHR11014:SF63 75 466 3.2E-101 T 22-04-2016 RPIC12D_RS11890 06a5ed1d4321265a9611cab7ea057561 470 Pfam PF07687 Peptidase dimerisation domain 246 341 3.0E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS11890 06a5ed1d4321265a9611cab7ea057561 470 PANTHER PTHR11014 75 466 3.2E-101 T 22-04-2016 RPIC12D_RS03635 7fea98aa4597012a259ab079a89c2a18 434 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 25 430 1.2E-153 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 RPIC12D_RS03635 7fea98aa4597012a259ab079a89c2a18 434 Pfam PF04052 TolB amino-terminal domain 33 131 1.7E-25 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RPIC12D_RS03635 7fea98aa4597012a259ab079a89c2a18 434 Hamap MF_00671 Protein TolB [tolB]. 14 429 34.649 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 RPIC12D_RS03635 7fea98aa4597012a259ab079a89c2a18 434 PANTHER PTHR11731 163 431 3.1E-73 T 22-04-2016 RPIC12D_RS03635 7fea98aa4597012a259ab079a89c2a18 434 PANTHER PTHR11731 1 126 3.1E-73 T 22-04-2016 RPIC12D_RS03635 7fea98aa4597012a259ab079a89c2a18 434 SUPERFAMILY SSF52964 41 164 1.57E-32 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RPIC12D_RS03635 7fea98aa4597012a259ab079a89c2a18 434 Gene3D G3DSA:2.130.10.10 155 431 5.3E-78 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RPIC12D_RS03635 7fea98aa4597012a259ab079a89c2a18 434 Pfam PF07676 WD40-like Beta Propeller Repeat 377 402 0.027 T 22-04-2016 IPR011659 WD40-like Beta Propeller RPIC12D_RS03635 7fea98aa4597012a259ab079a89c2a18 434 Pfam PF07676 WD40-like Beta Propeller Repeat 280 316 1.4E-14 T 22-04-2016 IPR011659 WD40-like Beta Propeller RPIC12D_RS03635 7fea98aa4597012a259ab079a89c2a18 434 Pfam PF07676 WD40-like Beta Propeller Repeat 328 363 9.2E-8 T 22-04-2016 IPR011659 WD40-like Beta Propeller RPIC12D_RS03635 7fea98aa4597012a259ab079a89c2a18 434 Pfam PF07676 WD40-like Beta Propeller Repeat 197 228 1.8E-6 T 22-04-2016 IPR011659 WD40-like Beta Propeller RPIC12D_RS03635 7fea98aa4597012a259ab079a89c2a18 434 Pfam PF07676 WD40-like Beta Propeller Repeat 239 271 9.6E-8 T 22-04-2016 IPR011659 WD40-like Beta Propeller RPIC12D_RS03635 7fea98aa4597012a259ab079a89c2a18 434 PANTHER PTHR11731:SF123 163 431 3.1E-73 T 22-04-2016 RPIC12D_RS03635 7fea98aa4597012a259ab079a89c2a18 434 PANTHER PTHR11731:SF123 1 126 3.1E-73 T 22-04-2016 RPIC12D_RS03635 7fea98aa4597012a259ab079a89c2a18 434 Gene3D G3DSA:3.40.50.10070 32 154 1.3E-40 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RPIC12D_RS03635 7fea98aa4597012a259ab079a89c2a18 434 SUPERFAMILY SSF69304 163 431 6.93E-58 T 22-04-2016 RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 SUPERFAMILY SSF116878 405 481 3.66E-48 T 22-04-2016 RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 SUPERFAMILY SSF116878 143 242 3.66E-48 T 22-04-2016 RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 Pfam PF10396 GTP-binding protein TrmE N-terminus 25 142 1.2E-38 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 Gene3D G3DSA:3.40.50.300 239 268 9.2E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 241 261 1.6E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 308 326 1.6E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 Gene3D G3DSA:3.30.1360.120 25 143 2.7E-43 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 Pfam PF12631 MnmE helical domain 145 478 1.7E-55 T 22-04-2016 IPR025867 MnmE, helical domain RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 Pfam PF01926 50S ribosome-binding GTPase 241 362 1.2E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 Gene3D G3DSA:3.40.50.300 308 401 3.3E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 PANTHER PTHR11649 27 481 2.4E-151 T 22-04-2016 RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 30 481 5.9E-98 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 SUPERFAMILY SSF52540 226 399 5.31E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 SUPERFAMILY SSF52540 90 192 5.31E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 PANTHER PTHR11649:SF56 27 481 2.4E-151 T 22-04-2016 RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 24 481 32.315 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 240 367 6.4E-21 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 Gene3D G3DSA:1.20.120.430 144 204 1.8E-56 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 Gene3D G3DSA:1.20.120.430 410 481 1.8E-56 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 RPIC12D_RS17325 2c0ca5e6e56e2cafb3d364ef30d172f3 481 Gene3D G3DSA:1.20.120.430 269 293 1.8E-56 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 RPIC12D_RS15945 73a560faaf7c8991a446913c9d6235af 67 Pfam PF12085 Protein of unknown function (DUF3562) 6 63 5.1E-26 T 22-04-2016 IPR021945 Protein of unknown function DUF3562 RPIC12D_RS09350 87af65efd2efdc15fa68d984cfd7def5 208 PANTHER PTHR31715 8 208 1.0E-121 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 RPIC12D_RS09350 87af65efd2efdc15fa68d984cfd7def5 208 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 11 181 4.5E-38 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RPIC12D_RS09350 87af65efd2efdc15fa68d984cfd7def5 208 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 9 203 1.9E-100 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 RPIC12D_RS09350 87af65efd2efdc15fa68d984cfd7def5 208 Hamap MF_01389 Urease accessory protein UreG [ureG]. 7 205 46.756 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 RPIC12D_RS09350 87af65efd2efdc15fa68d984cfd7def5 208 Gene3D G3DSA:3.40.50.300 9 199 1.0E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09350 87af65efd2efdc15fa68d984cfd7def5 208 PIRSF PIRSF005624 2 208 1.9E-47 T 22-04-2016 RPIC12D_RS09350 87af65efd2efdc15fa68d984cfd7def5 208 SUPERFAMILY SSF52540 7 200 1.08E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05990 c9e8a094d837edc27ede8a46961ab112 417 SUPERFAMILY SSF52777 187 416 4.89E-88 T 22-04-2016 RPIC12D_RS05990 c9e8a094d837edc27ede8a46961ab112 417 SUPERFAMILY SSF51230 2 94 3.93E-27 T 22-04-2016 IPR011053 Single hybrid motif RPIC12D_RS05990 c9e8a094d837edc27ede8a46961ab112 417 PANTHER PTHR23151 3 417 1.4E-211 T 22-04-2016 RPIC12D_RS05990 c9e8a094d837edc27ede8a46961ab112 417 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 416 2.0E-166 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 RPIC12D_RS05990 c9e8a094d837edc27ede8a46961ab112 417 Gene3D G3DSA:4.10.320.10 115 160 5.2E-15 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RPIC12D_RS05990 c9e8a094d837edc27ede8a46961ab112 417 Pfam PF02817 e3 binding domain 116 149 2.0E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RPIC12D_RS05990 c9e8a094d837edc27ede8a46961ab112 417 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RPIC12D_RS05990 c9e8a094d837edc27ede8a46961ab112 417 Gene3D G3DSA:2.40.50.100 2 94 1.6E-29 T 22-04-2016 RPIC12D_RS05990 c9e8a094d837edc27ede8a46961ab112 417 Pfam PF00364 Biotin-requiring enzyme 5 77 1.0E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RPIC12D_RS05990 c9e8a094d837edc27ede8a46961ab112 417 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 187 415 2.5E-80 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 RPIC12D_RS05990 c9e8a094d837edc27ede8a46961ab112 417 Gene3D G3DSA:3.30.559.10 184 415 6.5E-92 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain RPIC12D_RS05990 c9e8a094d837edc27ede8a46961ab112 417 SUPERFAMILY SSF47005 114 153 1.24E-9 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RPIC12D_RS05990 c9e8a094d837edc27ede8a46961ab112 417 PANTHER PTHR23151:SF47 3 417 1.4E-211 T 22-04-2016 RPIC12D_RS02410 d512d0fbde9f18edbe3b6952fac4aa9a 411 PANTHER PTHR11609:SF5 11 397 9.4E-122 T 22-04-2016 RPIC12D_RS02410 d512d0fbde9f18edbe3b6952fac4aa9a 411 SUPERFAMILY SSF51246 334 406 6.04E-16 T 22-04-2016 IPR011054 Rudiment single hybrid motif RPIC12D_RS02410 d512d0fbde9f18edbe3b6952fac4aa9a 411 Gene3D G3DSA:3.30.470.20 171 407 1.3E-81 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC12D_RS02410 d512d0fbde9f18edbe3b6952fac4aa9a 411 SUPERFAMILY SSF52440 26 125 2.59E-27 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS02410 d512d0fbde9f18edbe3b6952fac4aa9a 411 Gene3D G3DSA:3.40.50.20 26 137 2.6E-37 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS02410 d512d0fbde9f18edbe3b6952fac4aa9a 411 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 31 392 39.343 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RPIC12D_RS02410 d512d0fbde9f18edbe3b6952fac4aa9a 411 SUPERFAMILY SSF56059 129 330 1.21E-52 T 22-04-2016 RPIC12D_RS02410 d512d0fbde9f18edbe3b6952fac4aa9a 411 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 32 395 2.5E-109 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RPIC12D_RS02410 d512d0fbde9f18edbe3b6952fac4aa9a 411 PANTHER PTHR11609 11 397 9.4E-122 T 22-04-2016 RPIC12D_RS02410 d512d0fbde9f18edbe3b6952fac4aa9a 411 Pfam PF02222 ATP-grasp domain 143 310 1.0E-44 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 RPIC12D_RS05700 49abe6080b7fa5fca90ed3ec83834bff 402 Gene3D G3DSA:3.30.1540.10 224 306 6.4E-28 T 22-04-2016 RPIC12D_RS05700 49abe6080b7fa5fca90ed3ec83834bff 402 PANTHER PTHR24023:SF593 49 384 3.2E-41 T 22-04-2016 RPIC12D_RS05700 49abe6080b7fa5fca90ed3ec83834bff 402 SUPERFAMILY SSF89796 4 397 6.28E-133 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS05700 49abe6080b7fa5fca90ed3ec83834bff 402 PANTHER PTHR24023 49 384 3.2E-41 T 22-04-2016 RPIC12D_RS05700 49abe6080b7fa5fca90ed3ec83834bff 402 Pfam PF02515 CoA-transferase family III 6 374 1.9E-130 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RPIC12D_RS05700 49abe6080b7fa5fca90ed3ec83834bff 402 Gene3D G3DSA:3.40.50.10540 307 399 1.9E-112 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS05700 49abe6080b7fa5fca90ed3ec83834bff 402 Gene3D G3DSA:3.40.50.10540 2 217 1.9E-112 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS03390 ec7cece44532eb85b9197a29118a5328 305 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 15 275 3.6E-109 T 22-04-2016 IPR021844 Integrating conjugative element protein, PFL4704 RPIC12D_RS03390 ec7cece44532eb85b9197a29118a5328 305 Pfam PF11920 Protein of unknown function (DUF3438) 12 284 2.4E-120 T 22-04-2016 IPR021844 Integrating conjugative element protein, PFL4704 RPIC12D_RS06800 3549040ac9a6ae872119210231d8f570 271 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 152 180 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RPIC12D_RS06800 3549040ac9a6ae872119210231d8f570 271 PANTHER PTHR23416:SF8 1 263 4.4E-117 T 22-04-2016 RPIC12D_RS06800 3549040ac9a6ae872119210231d8f570 271 SUPERFAMILY SSF51161 5 248 1.72E-71 T 22-04-2016 IPR011004 Trimeric LpxA-like RPIC12D_RS06800 3549040ac9a6ae872119210231d8f570 271 PIRSF PIRSF000456 3 271 6.0E-100 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RPIC12D_RS06800 3549040ac9a6ae872119210231d8f570 271 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 4 271 44.908 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RPIC12D_RS06800 3549040ac9a6ae872119210231d8f570 271 Gene3D G3DSA:2.160.10.10 4 187 2.4E-47 T 22-04-2016 RPIC12D_RS06800 3549040ac9a6ae872119210231d8f570 271 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 7 270 8.5E-100 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RPIC12D_RS06800 3549040ac9a6ae872119210231d8f570 271 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 179 270 5.5E-27 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RPIC12D_RS06800 3549040ac9a6ae872119210231d8f570 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 21 51 1.2E-5 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC12D_RS06800 3549040ac9a6ae872119210231d8f570 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 142 9.5E-9 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC12D_RS06800 3549040ac9a6ae872119210231d8f570 271 PANTHER PTHR23416 1 263 4.4E-117 T 22-04-2016 RPIC12D_RS06800 3549040ac9a6ae872119210231d8f570 271 Gene3D G3DSA:1.20.1180.10 200 271 1.6E-24 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RPIC12D_RS07030 cd3ce280e6b48a128c6f67e0a7be4e3b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07030 cd3ce280e6b48a128c6f67e0a7be4e3b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07030 cd3ce280e6b48a128c6f67e0a7be4e3b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07030 cd3ce280e6b48a128c6f67e0a7be4e3b 297 Gene3D G3DSA:3.40.190.10 178 266 2.3E-20 T 22-04-2016 RPIC12D_RS07030 cd3ce280e6b48a128c6f67e0a7be4e3b 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 6.3E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07030 cd3ce280e6b48a128c6f67e0a7be4e3b 297 Gene3D G3DSA:1.10.10.10 3 87 1.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07030 cd3ce280e6b48a128c6f67e0a7be4e3b 297 SUPERFAMILY SSF53850 92 296 2.02E-35 T 22-04-2016 RPIC12D_RS07030 cd3ce280e6b48a128c6f67e0a7be4e3b 297 SUPERFAMILY SSF46785 3 87 4.09E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07030 cd3ce280e6b48a128c6f67e0a7be4e3b 297 PANTHER PTHR30419:SF8 1 295 1.9E-100 T 22-04-2016 RPIC12D_RS07030 cd3ce280e6b48a128c6f67e0a7be4e3b 297 PANTHER PTHR30419 1 295 1.9E-100 T 22-04-2016 RPIC12D_RS07030 cd3ce280e6b48a128c6f67e0a7be4e3b 297 Gene3D G3DSA:3.40.190.10 92 177 1.5E-9 T 22-04-2016 RPIC12D_RS07030 cd3ce280e6b48a128c6f67e0a7be4e3b 297 Pfam PF03466 LysR substrate binding domain 91 295 1.7E-40 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS02330 2983b86ec3fde5c9796c618024dfd6fe 171 Pfam PF00114 Pilin (bacterial filament) 44 170 5.9E-14 T 22-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 RPIC12D_RS02330 2983b86ec3fde5c9796c618024dfd6fe 171 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS02330 2983b86ec3fde5c9796c618024dfd6fe 171 Pfam PF13633 Prokaryotic N-terminal methylation site 12 38 2.9E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS02330 2983b86ec3fde5c9796c618024dfd6fe 171 PANTHER PTHR30093 4 59 3.3E-15 T 22-04-2016 RPIC12D_RS02330 2983b86ec3fde5c9796c618024dfd6fe 171 SUPERFAMILY SSF54523 15 89 1.26E-19 T 22-04-2016 RPIC12D_RS02330 2983b86ec3fde5c9796c618024dfd6fe 171 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 35 1.8E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS02330 2983b86ec3fde5c9796c618024dfd6fe 171 Gene3D G3DSA:3.30.700.10 15 170 1.2E-33 T 22-04-2016 RPIC12D_RS12355 1ba33559f042ab8c3e171741921ae138 141 Pfam PF00085 Thioredoxin 29 128 9.0E-8 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RPIC12D_RS12355 1ba33559f042ab8c3e171741921ae138 141 SUPERFAMILY SSF52833 16 133 8.83E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS12355 1ba33559f042ab8c3e171741921ae138 141 Gene3D G3DSA:3.40.30.10 28 129 4.3E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS03805 32fc9e3fc2d9f9c25f2c8ff67bfbf676 153 SUPERFAMILY SSF55811 4 130 1.62E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS03805 32fc9e3fc2d9f9c25f2c8ff67bfbf676 153 PANTHER PTHR21340 110 150 3.8E-16 T 22-04-2016 RPIC12D_RS03805 32fc9e3fc2d9f9c25f2c8ff67bfbf676 153 PANTHER PTHR21340 3 92 3.8E-16 T 22-04-2016 RPIC12D_RS03805 32fc9e3fc2d9f9c25f2c8ff67bfbf676 153 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RPIC12D_RS03805 32fc9e3fc2d9f9c25f2c8ff67bfbf676 153 Gene3D G3DSA:3.90.79.10 5 129 2.3E-26 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS03805 32fc9e3fc2d9f9c25f2c8ff67bfbf676 153 Pfam PF00293 NUDIX domain 7 123 2.1E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC12D_RS08995 adb4d80ca74f15e0fba182e8decd1d07 225 SMART SM00100 16 134 6.9E-12 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC12D_RS08995 adb4d80ca74f15e0fba182e8decd1d07 225 PANTHER PTHR24567:SF30 9 223 1.6E-37 T 22-04-2016 RPIC12D_RS08995 adb4d80ca74f15e0fba182e8decd1d07 225 SUPERFAMILY SSF51206 9 145 2.88E-30 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like RPIC12D_RS08995 adb4d80ca74f15e0fba182e8decd1d07 225 Pfam PF13545 Crp-like helix-turn-helix domain 154 220 6.7E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS08995 adb4d80ca74f15e0fba182e8decd1d07 225 Gene3D G3DSA:1.10.10.10 151 220 4.3E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08995 adb4d80ca74f15e0fba182e8decd1d07 225 PANTHER PTHR24567 9 223 1.6E-37 T 22-04-2016 RPIC12D_RS08995 adb4d80ca74f15e0fba182e8decd1d07 225 SMART SM00419 166 214 8.1E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS08995 adb4d80ca74f15e0fba182e8decd1d07 225 SUPERFAMILY SSF46785 151 220 8.75E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08995 adb4d80ca74f15e0fba182e8decd1d07 225 Pfam PF00027 Cyclic nucleotide-binding domain 35 119 3.3E-17 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC12D_RS08995 adb4d80ca74f15e0fba182e8decd1d07 225 Gene3D G3DSA:2.60.120.10 11 146 3.0E-27 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS05625 fea4f15f52a6b84f1267a25495d3b6ce 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.9E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS05625 fea4f15f52a6b84f1267a25495d3b6ce 86 PANTHER PTHR33280 1 78 5.6E-32 T 22-04-2016 RPIC12D_RS05625 fea4f15f52a6b84f1267a25495d3b6ce 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS05625 fea4f15f52a6b84f1267a25495d3b6ce 86 SUPERFAMILY SSF143800 1 78 2.0E-23 T 22-04-2016 RPIC12D_RS05625 fea4f15f52a6b84f1267a25495d3b6ce 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.288 T 22-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS05625 fea4f15f52a6b84f1267a25495d3b6ce 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.9E-18 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS05625 fea4f15f52a6b84f1267a25495d3b6ce 86 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.9E-18 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS05625 fea4f15f52a6b84f1267a25495d3b6ce 86 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.9E-18 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS05625 fea4f15f52a6b84f1267a25495d3b6ce 86 Pfam PF01197 Ribosomal protein L31 1 78 2.6E-31 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06960 faf3782585c88a7fe245690793800430 293 SMART SM00849 41 226 6.9E-14 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS06960 faf3782585c88a7fe245690793800430 293 PANTHER PTHR11935:SF5 29 293 5.3E-91 T 22-04-2016 RPIC12D_RS06960 faf3782585c88a7fe245690793800430 293 SUPERFAMILY SSF56281 24 249 9.28E-42 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS06960 faf3782585c88a7fe245690793800430 293 Pfam PF00753 Metallo-beta-lactamase superfamily 41 226 2.0E-5 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS06960 faf3782585c88a7fe245690793800430 293 PANTHER PTHR11935 29 293 5.3E-91 T 22-04-2016 RPIC12D_RS06960 faf3782585c88a7fe245690793800430 293 Gene3D G3DSA:3.60.15.10 28 253 7.0E-35 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS14685 ae8fbe159d3d04c611d600429b812233 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14685 ae8fbe159d3d04c611d600429b812233 177 SUPERFAMILY SSF56053 1 82 1.21E-23 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS14685 ae8fbe159d3d04c611d600429b812233 177 Pfam PF00347 Ribosomal protein L6 12 82 2.1E-16 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS14685 ae8fbe159d3d04c611d600429b812233 177 Pfam PF00347 Ribosomal protein L6 90 164 2.3E-19 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS14685 ae8fbe159d3d04c611d600429b812233 177 PANTHER PTHR11655 1 176 1.0E-86 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS14685 ae8fbe159d3d04c611d600429b812233 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.853 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS14685 ae8fbe159d3d04c611d600429b812233 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 7.9E-73 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS14685 ae8fbe159d3d04c611d600429b812233 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.7E-31 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS14685 ae8fbe159d3d04c611d600429b812233 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.7E-31 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS14685 ae8fbe159d3d04c611d600429b812233 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.7E-31 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS14685 ae8fbe159d3d04c611d600429b812233 177 PIRSF PIRSF002162 1 177 7.2E-45 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS14685 ae8fbe159d3d04c611d600429b812233 177 Gene3D G3DSA:3.90.930.12 2 82 5.7E-28 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS14685 ae8fbe159d3d04c611d600429b812233 177 Gene3D G3DSA:3.90.930.12 83 177 8.5E-40 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS14685 ae8fbe159d3d04c611d600429b812233 177 SUPERFAMILY SSF56053 83 177 3.01E-35 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS14685 ae8fbe159d3d04c611d600429b812233 177 PANTHER PTHR11655:SF14 1 176 1.0E-86 T 22-04-2016 RPIC12D_RS00580 e323aa5a0f053e7dcadf5b857e46496b 225 PANTHER PTHR30055 25 217 2.2E-29 T 22-04-2016 RPIC12D_RS00580 e323aa5a0f053e7dcadf5b857e46496b 225 Gene3D G3DSA:1.10.10.60 34 86 4.6E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS00580 e323aa5a0f053e7dcadf5b857e46496b 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 63 86 7.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS00580 e323aa5a0f053e7dcadf5b857e46496b 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 55 7.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS00580 e323aa5a0f053e7dcadf5b857e46496b 225 SUPERFAMILY SSF46689 29 113 1.28E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS00580 e323aa5a0f053e7dcadf5b857e46496b 225 PANTHER PTHR30055:SF56 25 217 2.2E-29 T 22-04-2016 RPIC12D_RS00580 e323aa5a0f053e7dcadf5b857e46496b 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 42 88 2.4E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS00580 e323aa5a0f053e7dcadf5b857e46496b 225 SUPERFAMILY SSF48498 109 218 2.76E-17 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC12D_RS00580 e323aa5a0f053e7dcadf5b857e46496b 225 Gene3D G3DSA:1.10.357.10 87 218 4.4E-38 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 Pfam PF02954 Bacterial regulatory protein, Fis family 460 499 1.6E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 SUPERFAMILY SSF52172 2 181 3.56E-41 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 Pfam PF00158 Sigma-54 interaction domain 136 302 4.3E-69 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 SUPERFAMILY SSF52540 135 378 5.98E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 SMART SM00382 156 303 3.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 387 1.3E-190 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 PANTHER PTHR32071:SF15 416 502 1.1E-214 T 22-04-2016 RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 PANTHER PTHR32071:SF15 1 387 1.1E-214 T 22-04-2016 RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 SMART SM00448 2 113 2.8E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 Pfam PF00072 Response regulator receiver domain 4 113 1.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 PANTHER PTHR32071 416 502 1.1E-214 T 22-04-2016 RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 PANTHER PTHR32071 1 387 1.1E-214 T 22-04-2016 RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 465 482 2.4E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 482 502 2.4E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 Gene3D G3DSA:3.40.50.2300 4 127 2.6E-33 T 22-04-2016 RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 SUPERFAMILY SSF46689 423 501 3.49E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 Gene3D G3DSA:1.10.10.60 347 381 3.5E-37 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 Gene3D G3DSA:1.10.10.60 447 501 3.5E-37 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS05945 b368e2e5c3516dbc2ae12907d0d88768 502 Gene3D G3DSA:3.40.50.300 134 308 1.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15545 1521b2a324cadfa6ce351abb6f6c7e35 141 Pfam PF02566 OsmC-like protein 43 138 4.2E-16 T 22-04-2016 IPR003718 OsmC/Ohr family RPIC12D_RS15545 1521b2a324cadfa6ce351abb6f6c7e35 141 PANTHER PTHR33797 1 140 9.6E-68 T 22-04-2016 RPIC12D_RS15545 1521b2a324cadfa6ce351abb6f6c7e35 141 PANTHER PTHR33797:SF2 1 140 9.6E-68 T 22-04-2016 RPIC12D_RS15545 1521b2a324cadfa6ce351abb6f6c7e35 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 139 2.2E-53 T 22-04-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 RPIC12D_RS15545 1521b2a324cadfa6ce351abb6f6c7e35 141 SUPERFAMILY SSF82784 1 140 8.9E-44 T 22-04-2016 IPR003718 OsmC/Ohr family RPIC12D_RS15545 1521b2a324cadfa6ce351abb6f6c7e35 141 Gene3D G3DSA:2.20.25.10 1 47 9.4E-22 T 22-04-2016 RPIC12D_RS15545 1521b2a324cadfa6ce351abb6f6c7e35 141 Gene3D G3DSA:3.30.300.20 48 140 1.5E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RPIC12D_RS16860 0ccb59455f56ff68e9d528ace3022dc5 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 215 226 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC12D_RS16860 0ccb59455f56ff68e9d528ace3022dc5 562 Gene3D G3DSA:2.30.38.10 384 454 2.7E-23 T 22-04-2016 RPIC12D_RS16860 0ccb59455f56ff68e9d528ace3022dc5 562 Gene3D G3DSA:3.40.50.980 18 144 6.1E-41 T 22-04-2016 RPIC12D_RS16860 0ccb59455f56ff68e9d528ace3022dc5 562 Gene3D G3DSA:3.40.50.980 189 220 6.1E-41 T 22-04-2016 RPIC12D_RS16860 0ccb59455f56ff68e9d528ace3022dc5 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 549 2.1E-20 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC12D_RS16860 0ccb59455f56ff68e9d528ace3022dc5 562 SUPERFAMILY SSF56801 16 559 9.16E-145 T 22-04-2016 RPIC12D_RS16860 0ccb59455f56ff68e9d528ace3022dc5 562 Gene3D G3DSA:3.40.50.980 221 379 5.4E-39 T 22-04-2016 RPIC12D_RS16860 0ccb59455f56ff68e9d528ace3022dc5 562 PANTHER PTHR24096 1 145 3.3E-147 T 22-04-2016 RPIC12D_RS16860 0ccb59455f56ff68e9d528ace3022dc5 562 PANTHER PTHR24096 173 560 3.3E-147 T 22-04-2016 RPIC12D_RS16860 0ccb59455f56ff68e9d528ace3022dc5 562 Pfam PF00501 AMP-binding enzyme 24 466 1.0E-94 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC12D_RS16860 0ccb59455f56ff68e9d528ace3022dc5 562 Gene3D G3DSA:3.30.300.30 462 559 2.6E-32 T 22-04-2016 RPIC12D_RS05640 a3ce64b8f9e3438d2d868da690f26257 219 SMART SM00421 151 208 4.6E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS05640 a3ce64b8f9e3438d2d868da690f26257 219 Pfam PF00072 Response regulator receiver domain 5 108 1.9E-5 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS05640 a3ce64b8f9e3438d2d868da690f26257 219 Gene3D G3DSA:1.10.10.10 143 212 3.0E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS05640 a3ce64b8f9e3438d2d868da690f26257 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 2.3E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS05640 a3ce64b8f9e3438d2d868da690f26257 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 2.3E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS05640 a3ce64b8f9e3438d2d868da690f26257 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 2.3E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS05640 a3ce64b8f9e3438d2d868da690f26257 219 PANTHER PTHR26402 1 216 1.9E-25 T 22-04-2016 RPIC12D_RS05640 a3ce64b8f9e3438d2d868da690f26257 219 PANTHER PTHR26402:SF151 1 216 1.9E-25 T 22-04-2016 RPIC12D_RS05640 a3ce64b8f9e3438d2d868da690f26257 219 SUPERFAMILY SSF46894 144 212 2.21E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS05640 a3ce64b8f9e3438d2d868da690f26257 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 208 7.3E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS05640 a3ce64b8f9e3438d2d868da690f26257 219 SUPERFAMILY SSF52172 2 120 1.22E-11 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS05640 a3ce64b8f9e3438d2d868da690f26257 219 Gene3D G3DSA:3.40.50.2300 4 123 1.6E-10 T 22-04-2016 RPIC12D_RS06505 8eff8088a1336d957099299e381906f4 434 Gene3D G3DSA:3.20.20.60 9 406 1.3E-164 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS06505 8eff8088a1336d957099299e381906f4 434 PANTHER PTHR21631 1 423 2.9E-168 T 22-04-2016 RPIC12D_RS06505 8eff8088a1336d957099299e381906f4 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 7 247 2.1E-108 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RPIC12D_RS06505 8eff8088a1336d957099299e381906f4 434 ProSitePatterns PS00161 Isocitrate lyase signature. 185 190 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 RPIC12D_RS06505 8eff8088a1336d957099299e381906f4 434 PIRSF PIRSF001362 1 426 7.9E-235 T 22-04-2016 RPIC12D_RS06505 8eff8088a1336d957099299e381906f4 434 SUPERFAMILY SSF51621 8 423 7.18E-158 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS06505 8eff8088a1336d957099299e381906f4 434 Pfam PF00463 Isocitrate lyase family 7 247 8.3E-61 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RPIC12D_RS06505 8eff8088a1336d957099299e381906f4 434 Pfam PF00463 Isocitrate lyase family 248 420 2.2E-42 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RPIC12D_RS14335 ca9a9a72094ebea2ab513c27ff65ef47 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 1.4E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS14335 ca9a9a72094ebea2ab513c27ff65ef47 233 SMART SM00862 145 218 1.4E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS14335 ca9a9a72094ebea2ab513c27ff65ef47 233 Pfam PF00072 Response regulator receiver domain 3 112 1.7E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS14335 ca9a9a72094ebea2ab513c27ff65ef47 233 SUPERFAMILY SSF46894 120 219 1.93E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS14335 ca9a9a72094ebea2ab513c27ff65ef47 233 Gene3D G3DSA:3.40.50.2300 1 120 2.2E-35 T 22-04-2016 RPIC12D_RS14335 ca9a9a72094ebea2ab513c27ff65ef47 233 SMART SM00448 1 112 1.5E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS14335 ca9a9a72094ebea2ab513c27ff65ef47 233 PANTHER PTHR26402:SF518 1 220 1.5E-72 T 22-04-2016 RPIC12D_RS14335 ca9a9a72094ebea2ab513c27ff65ef47 233 SUPERFAMILY SSF52172 1 129 9.25E-35 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS14335 ca9a9a72094ebea2ab513c27ff65ef47 233 Gene3D G3DSA:1.10.10.10 126 220 9.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS14335 ca9a9a72094ebea2ab513c27ff65ef47 233 PANTHER PTHR26402 1 220 1.5E-72 T 22-04-2016 RPIC12D_RS06570 da082ae8afd5b6e1c48a75f8a621ff24 264 PANTHER PTHR33693:SF1 80 251 5.8E-71 T 22-04-2016 RPIC12D_RS06570 da082ae8afd5b6e1c48a75f8a621ff24 264 PANTHER PTHR33693 80 251 5.8E-71 T 22-04-2016 RPIC12D_RS06570 da082ae8afd5b6e1c48a75f8a621ff24 264 Pfam PF03167 Uracil DNA glycosylase superfamily 105 251 2.1E-47 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC12D_RS06570 da082ae8afd5b6e1c48a75f8a621ff24 264 SUPERFAMILY SSF52141 80 258 3.92E-62 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC12D_RS06570 da082ae8afd5b6e1c48a75f8a621ff24 264 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 91 252 3.1E-64 T 22-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain RPIC12D_RS06570 da082ae8afd5b6e1c48a75f8a621ff24 264 Gene3D G3DSA:3.40.470.10 80 260 7.8E-72 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC12D_RS06570 da082ae8afd5b6e1c48a75f8a621ff24 264 SMART SM00987 105 252 5.2E-42 T 22-04-2016 RPIC12D_RS06570 da082ae8afd5b6e1c48a75f8a621ff24 264 SMART SM00986 105 252 5.2E-42 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 SUPERFAMILY SSF47384 571 643 6.08E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 SUPERFAMILY SSF158472 376 423 9.29E-9 T 22-04-2016 RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 Pfam PF08448 PAS fold 446 565 1.1E-5 T 22-04-2016 IPR013656 PAS fold-4 RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 PRINTS PR00344 Bacterial sensor protein C-terminal signature 761 771 1.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 PRINTS PR00344 Bacterial sensor protein C-terminal signature 743 757 1.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 PRINTS PR00344 Bacterial sensor protein C-terminal signature 772 790 1.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 Pfam PF00672 HAMP domain 356 422 8.2E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 690 804 2.3E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 Gene3D G3DSA:1.10.287.130 574 642 2.4E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 SMART SM00388 574 646 1.8E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 Gene3D G3DSA:3.30.565.10 648 801 1.1E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 SUPERFAMILY SSF55874 635 799 2.36E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 SMART SM00304 374 426 7.0E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 Gene3D G3DSA:3.30.450.20 430 565 5.2E-13 T 22-04-2016 RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 Pfam PF00512 His Kinase A (phospho-acceptor) domain 575 642 5.0E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 SUPERFAMILY SSF55785 430 564 4.95E-10 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 SMART SM00387 690 823 1.5E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 PANTHER PTHR24423 438 797 1.4E-48 T 22-04-2016 RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 PANTHER PTHR24423 17 27 1.4E-48 T 22-04-2016 RPIC12D_RS16795 eb8ebfb55a08f69c156b991eaa7077d5 823 PANTHER PTHR24423 272 291 1.4E-48 T 22-04-2016 RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 SUPERFAMILY SSF55874 332 501 2.75E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 SMART SM00448 4 120 4.3E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 SMART SM00448 525 635 2.4E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 Gene3D G3DSA:3.30.450.20 129 253 3.8E-23 T 22-04-2016 RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 SMART SM00388 277 343 2.5E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 Pfam PF00512 His Kinase A (phospho-acceptor) domain 278 338 3.4E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 Gene3D G3DSA:3.30.565.10 345 507 1.7E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 SMART SM00091 141 210 9.7E-6 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 Pfam PF00072 Response regulator receiver domain 7 108 8.8E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 Pfam PF00072 Response regulator receiver domain 527 634 5.4E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 Gene3D G3DSA:3.40.50.2300 516 641 2.9E-30 T 22-04-2016 RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 SMART SM00387 389 503 1.4E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 Gene3D G3DSA:3.40.50.2300 3 128 1.9E-21 T 22-04-2016 RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 SUPERFAMILY SSF52172 1 149 1.71E-23 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 Gene3D G3DSA:1.10.287.130 269 337 1.4E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 SUPERFAMILY SSF47384 261 344 2.94E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 SUPERFAMILY SSF52172 523 642 9.82E-33 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 390 502 3.2E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 SUPERFAMILY SSF55785 128 253 1.47E-21 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 441 2.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 500 2.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 480 2.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 455 2.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 137 261 6.5E-15 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 Pfam PF13426 PAS domain 155 256 2.8E-12 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS13995 c7c35e37048c912bf6a6fdfc817bdf53 652 PANTHER PTHR24423 125 645 2.2E-127 T 22-04-2016 RPIC12D_RS13090 5e253be637d6c174ef3a44f9e3069ab9 192 Pfam PF04345 Chorismate lyase 28 183 8.4E-22 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 RPIC12D_RS13090 5e253be637d6c174ef3a44f9e3069ab9 192 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 10 188 24.149 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 RPIC12D_RS13090 5e253be637d6c174ef3a44f9e3069ab9 192 PANTHER PTHR38683 1 185 1.4E-20 T 22-04-2016 RPIC12D_RS13090 5e253be637d6c174ef3a44f9e3069ab9 192 SUPERFAMILY SSF64288 10 186 5.23E-40 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RPIC12D_RS13090 5e253be637d6c174ef3a44f9e3069ab9 192 Gene3D G3DSA:3.40.1410.10 17 185 6.9E-43 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RPIC12D_RS08790 942d61ccc61a95af806dead266e18669 271 Gene3D G3DSA:3.30.465.10 59 174 4.8E-30 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC12D_RS08790 942d61ccc61a95af806dead266e18669 271 PANTHER PTHR11908 1 270 2.5E-56 T 22-04-2016 RPIC12D_RS08790 942d61ccc61a95af806dead266e18669 271 SUPERFAMILY SSF56176 1 174 1.47E-45 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS08790 942d61ccc61a95af806dead266e18669 271 Gene3D G3DSA:3.30.390.50 179 270 4.8E-15 T 22-04-2016 RPIC12D_RS08790 942d61ccc61a95af806dead266e18669 271 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 183 270 5.0E-6 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC12D_RS08790 942d61ccc61a95af806dead266e18669 271 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 174 2.3E-40 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 RPIC12D_RS08790 942d61ccc61a95af806dead266e18669 271 SUPERFAMILY SSF55447 179 270 2.88E-16 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC12D_RS08790 942d61ccc61a95af806dead266e18669 271 PANTHER PTHR11908:SF68 1 270 2.5E-56 T 22-04-2016 RPIC12D_RS08790 942d61ccc61a95af806dead266e18669 271 SMART SM01092 181 270 5.0E-11 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC12D_RS08790 942d61ccc61a95af806dead266e18669 271 Gene3D G3DSA:3.30.43.10 1 54 8.5E-21 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RPIC12D_RS09600 12ed0f24d5ea03a4108805253051906a 188 Gene3D G3DSA:1.10.1740.10 3 77 6.0E-8 T 22-04-2016 RPIC12D_RS09600 12ed0f24d5ea03a4108805253051906a 188 SUPERFAMILY SSF88659 117 181 6.35E-17 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS09600 12ed0f24d5ea03a4108805253051906a 188 Pfam PF08281 Sigma-70, region 4 125 173 1.7E-17 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS09600 12ed0f24d5ea03a4108805253051906a 188 SUPERFAMILY SSF88946 6 84 2.16E-8 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS09600 12ed0f24d5ea03a4108805253051906a 188 PANTHER PTHR30173 4 184 1.9E-19 T 22-04-2016 RPIC12D_RS09600 12ed0f24d5ea03a4108805253051906a 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 181 2.7E-20 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS09600 12ed0f24d5ea03a4108805253051906a 188 Gene3D G3DSA:1.10.10.10 118 182 2.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 SUPERFAMILY SSF52172 4 189 2.13E-42 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 Pfam PF00072 Response regulator receiver domain 7 116 6.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 Gene3D G3DSA:1.10.10.60 367 438 3.1E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 PANTHER PTHR32071 5 438 1.1E-211 T 22-04-2016 RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 Gene3D G3DSA:3.40.50.2300 5 136 2.0E-33 T 22-04-2016 RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 438 8.0E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 8.0E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 SUPERFAMILY SSF52540 145 379 1.91E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 SMART SM00382 165 308 1.2E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 SUPERFAMILY SSF46689 387 438 1.02E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 Pfam PF00158 Sigma-54 interaction domain 145 311 7.6E-68 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 Gene3D G3DSA:1.10.8.60 318 366 4.2E-19 T 22-04-2016 RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 PANTHER PTHR32071:SF11 5 438 1.1E-211 T 22-04-2016 RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 Pfam PF02954 Bacterial regulatory protein, Fis family 397 436 2.0E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 SMART SM00448 5 116 2.2E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS00960 cdb53c6d77237dab445a010b4175ae33 438 Gene3D G3DSA:3.40.50.300 144 317 4.9E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06430 c0b72441d5eaf3994271b4b5e7a0b3fc 279 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS06430 c0b72441d5eaf3994271b4b5e7a0b3fc 279 Pfam PF00005 ABC transporter 31 164 7.8E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS06430 c0b72441d5eaf3994271b4b5e7a0b3fc 279 SMART SM00382 40 214 3.0E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS06430 c0b72441d5eaf3994271b4b5e7a0b3fc 279 PANTHER PTHR24220:SF365 17 248 8.3E-119 T 22-04-2016 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB GO:0005215|GO:0005524|GO:0005886|GO:0006810 RPIC12D_RS06430 c0b72441d5eaf3994271b4b5e7a0b3fc 279 SUPERFAMILY SSF52540 16 223 1.43E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06430 c0b72441d5eaf3994271b4b5e7a0b3fc 279 Gene3D G3DSA:3.40.50.300 12 218 7.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06430 c0b72441d5eaf3994271b4b5e7a0b3fc 279 PANTHER PTHR24220 17 248 8.3E-119 T 22-04-2016 RPIC12D_RS06215 e409a50fec32570b098cd6029c872678 576 Gene3D G3DSA:3.30.70.360 381 471 7.5E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS06215 e409a50fec32570b098cd6029c872678 576 Pfam PF07687 Peptidase dimerisation domain 355 469 3.6E-5 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS06215 e409a50fec32570b098cd6029c872678 576 SUPERFAMILY SSF55031 275 474 2.69E-41 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS06215 e409a50fec32570b098cd6029c872678 576 SUPERFAMILY SSF53187 488 571 6.29E-48 T 22-04-2016 RPIC12D_RS06215 e409a50fec32570b098cd6029c872678 576 SUPERFAMILY SSF53187 96 275 6.29E-48 T 22-04-2016 RPIC12D_RS06215 e409a50fec32570b098cd6029c872678 576 Gene3D G3DSA:3.40.630.10 96 281 1.3E-53 T 22-04-2016 RPIC12D_RS06215 e409a50fec32570b098cd6029c872678 576 Gene3D G3DSA:3.40.630.10 512 571 1.3E-53 T 22-04-2016 RPIC12D_RS06215 e409a50fec32570b098cd6029c872678 576 PANTHER PTHR11014 96 279 2.7E-40 T 22-04-2016 RPIC12D_RS06215 e409a50fec32570b098cd6029c872678 576 PANTHER PTHR11014 356 574 2.7E-40 T 22-04-2016 RPIC12D_RS06215 e409a50fec32570b098cd6029c872678 576 Pfam PF01546 Peptidase family M20/M25/M40 168 566 2.7E-23 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC12D_RS06215 e409a50fec32570b098cd6029c872678 576 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 99 564 1.5E-79 T 22-04-2016 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 KEGG: 00480+3.4.13.- RPIC12D_RS06215 e409a50fec32570b098cd6029c872678 576 Gene3D G3DSA:3.30.70.360 295 380 1.3E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 SMART SM00388 832 897 3.6E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 SMART SM00062 290 510 4.1E-23 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 SMART SM00062 47 268 3.9E-4 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 49 265 6.0E-15 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 291 508 7.8E-31 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 SUPERFAMILY SSF55785 551 678 2.97E-18 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 SUPERFAMILY SSF47226 1277 1401 6.15E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 Gene3D G3DSA:1.20.120.160 1312 1400 2.4E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 Gene3D G3DSA:3.40.190.10 291 368 3.4E-14 T 22-04-2016 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 Gene3D G3DSA:3.40.190.10 471 509 3.4E-14 T 22-04-2016 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 PANTHER PTHR24423:SF382 771 1063 1.2E-162 T 22-04-2016 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 PANTHER PTHR24423:SF382 1166 1297 1.2E-162 T 22-04-2016 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 PANTHER PTHR24423:SF382 542 640 1.2E-162 T 22-04-2016 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 Pfam PF08447 PAS fold 720 801 3.9E-10 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 SUPERFAMILY SSF53850 48 267 9.72E-24 T 22-04-2016 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 Gene3D G3DSA:3.40.190.10 55 160 2.2E-7 T 22-04-2016 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 Pfam PF00072 Response regulator receiver domain 1182 1294 1.1E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 Pfam PF08448 PAS fold 571 680 4.2E-10 T 22-04-2016 IPR013656 PAS fold-4 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 Gene3D G3DSA:3.30.450.20 683 810 2.4E-18 T 22-04-2016 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 691 817 3.6E-7 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 563 686 2.9E-10 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 Gene3D G3DSA:3.40.50.2300 1177 1299 9.3E-37 T 22-04-2016 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1044 1057 3.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1003 1013 3.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 985 999 3.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1020 1038 3.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 945 1057 5.4E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 SUPERFAMILY SSF47384 817 898 1.8E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 Gene3D G3DSA:1.10.287.130 826 893 1.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 Pfam PF00512 His Kinase A (phospho-acceptor) domain 832 897 4.5E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 SMART SM00086 638 680 12.0 T 22-04-2016 IPR001610 PAC motif RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 SMART SM00086 771 812 3.9 T 22-04-2016 IPR001610 PAC motif RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 Gene3D G3DSA:3.30.450.20 551 678 5.2E-18 T 22-04-2016 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 Gene3D G3DSA:3.40.190.10 369 470 1.3E-11 T 22-04-2016 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 SMART SM00448 1180 1294 3.2E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 SMART SM00091 692 765 0.38 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 SMART SM00091 564 632 0.022 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 PANTHER PTHR24423 771 1063 1.2E-162 T 22-04-2016 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 PANTHER PTHR24423 1166 1297 1.2E-162 T 22-04-2016 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 PANTHER PTHR24423 542 640 1.2E-162 T 22-04-2016 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 Gene3D G3DSA:3.30.565.10 898 1059 1.7E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 Gene3D G3DSA:3.40.190.10 161 220 2.2E-4 T 22-04-2016 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 SUPERFAMILY SSF53850 285 511 3.72E-40 T 22-04-2016 RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 SUPERFAMILY SSF55874 886 1057 7.2E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 SUPERFAMILY SSF55785 677 810 4.54E-17 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 SMART SM00387 944 1060 2.0E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS15110 f888e5aec43fff08d23c9f3a0d0f3773 1436 SUPERFAMILY SSF52172 1178 1298 8.25E-36 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS11195 2dd97f3c06173168200034d1f00a4c86 271 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 61 234 1.7E-36 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 RPIC12D_RS11195 2dd97f3c06173168200034d1f00a4c86 271 PANTHER PTHR23293 59 263 2.3E-67 T 22-04-2016 RPIC12D_RS11195 2dd97f3c06173168200034d1f00a4c86 271 PIRSF PIRSF000857 24 265 2.7E-77 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 RPIC12D_RS11195 2dd97f3c06173168200034d1f00a4c86 271 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 61 258 6.0E-79 T 22-04-2016 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 RPIC12D_RS11195 2dd97f3c06173168200034d1f00a4c86 271 SUPERFAMILY SSF52402 35 222 1.32E-41 T 22-04-2016 RPIC12D_RS11195 2dd97f3c06173168200034d1f00a4c86 271 Gene3D G3DSA:3.40.50.620 33 230 6.9E-48 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS11195 2dd97f3c06173168200034d1f00a4c86 271 PANTHER PTHR23293:SF11 59 263 2.3E-67 T 22-04-2016 RPIC12D_RS12115 b46d09b64aa2d250107414bf31987c8b 795 SUPERFAMILY SSF56235 41 790 5.4E-164 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS12115 b46d09b64aa2d250107414bf31987c8b 795 Pfam PF01804 Penicillin amidase 42 783 1.8E-131 T 22-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 RPIC12D_RS12115 b46d09b64aa2d250107414bf31987c8b 795 Gene3D G3DSA:1.10.439.10 41 173 1.8E-34 T 22-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 RPIC12D_RS12115 b46d09b64aa2d250107414bf31987c8b 795 PANTHER PTHR34218 10 795 1.2E-234 T 22-04-2016 RPIC12D_RS12115 b46d09b64aa2d250107414bf31987c8b 795 Gene3D G3DSA:2.30.120.10 313 370 1.7E-16 T 22-04-2016 RPIC12D_RS12115 b46d09b64aa2d250107414bf31987c8b 795 PANTHER PTHR34218:SF3 10 795 1.2E-234 T 22-04-2016 RPIC12D_RS12115 b46d09b64aa2d250107414bf31987c8b 795 Gene3D G3DSA:3.60.20.10 395 622 7.7E-83 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS12115 b46d09b64aa2d250107414bf31987c8b 795 Gene3D G3DSA:3.60.20.10 174 312 7.7E-83 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS06435 ede3e1ca52c684e662cfce1e7bb3188a 71 Pfam PF03459 TOBE domain 8 67 3.8E-16 T 22-04-2016 IPR005116 Transport-associated OB, type 1 RPIC12D_RS06435 ede3e1ca52c684e662cfce1e7bb3188a 71 SUPERFAMILY SSF50331 6 69 5.83E-17 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RPIC12D_RS06435 ede3e1ca52c684e662cfce1e7bb3188a 71 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 6 69 8.6E-18 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 RPIC12D_RS06435 ede3e1ca52c684e662cfce1e7bb3188a 71 Gene3D G3DSA:2.40.50.100 6 69 2.0E-22 T 22-04-2016 RPIC12D_RS14505 be581792f9b193fa709de425404c9d65 388 SMART SM00471 74 218 7.2E-11 T 22-04-2016 IPR003607 HD/PDEase domain RPIC12D_RS14505 be581792f9b193fa709de425404c9d65 388 PANTHER PTHR11373 18 388 2.1E-83 T 22-04-2016 RPIC12D_RS14505 be581792f9b193fa709de425404c9d65 388 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 41 173 2.4E-58 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 RPIC12D_RS14505 be581792f9b193fa709de425404c9d65 388 SUPERFAMILY SSF109604 29 383 2.55E-94 T 22-04-2016 RPIC12D_RS14505 be581792f9b193fa709de425404c9d65 388 PANTHER PTHR11373:SF25 18 388 2.1E-83 T 22-04-2016 RPIC12D_RS14505 be581792f9b193fa709de425404c9d65 388 Gene3D G3DSA:1.10.3210.10 284 384 4.4E-84 T 22-04-2016 IPR006674 HD domain RPIC12D_RS14505 be581792f9b193fa709de425404c9d65 388 Gene3D G3DSA:1.10.3210.10 36 227 4.4E-84 T 22-04-2016 IPR006674 HD domain RPIC12D_RS14505 be581792f9b193fa709de425404c9d65 388 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 18 383 39.198 T 22-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 RPIC12D_RS14505 be581792f9b193fa709de425404c9d65 388 Pfam PF01966 HD domain 78 208 1.1E-15 T 22-04-2016 IPR006674 HD domain RPIC12D_RS14505 be581792f9b193fa709de425404c9d65 388 Pfam PF13286 Phosphohydrolase-associated domain 294 381 1.3E-29 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain RPIC12D_RS11705 b399a26a53c6d32dab440874670aca93 610 SUPERFAMILY SSF55874 289 452 8.64E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS11705 b399a26a53c6d32dab440874670aca93 610 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 298 2.9E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS11705 b399a26a53c6d32dab440874670aca93 610 SMART SM00388 234 299 5.8E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS11705 b399a26a53c6d32dab440874670aca93 610 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 453 1.6E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS11705 b399a26a53c6d32dab440874670aca93 610 Gene3D G3DSA:3.30.565.10 302 453 1.6E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS11705 b399a26a53c6d32dab440874670aca93 610 PANTHER PTHR24423 78 89 1.1E-87 T 22-04-2016 RPIC12D_RS11705 b399a26a53c6d32dab440874670aca93 610 PANTHER PTHR24423 213 602 1.1E-87 T 22-04-2016 RPIC12D_RS11705 b399a26a53c6d32dab440874670aca93 610 Gene3D G3DSA:3.40.50.2300 484 604 3.2E-25 T 22-04-2016 RPIC12D_RS11705 b399a26a53c6d32dab440874670aca93 610 Pfam PF00072 Response regulator receiver domain 485 593 1.8E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS11705 b399a26a53c6d32dab440874670aca93 610 SMART SM00387 345 456 8.1E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS11705 b399a26a53c6d32dab440874670aca93 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 1.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS11705 b399a26a53c6d32dab440874670aca93 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 1.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS11705 b399a26a53c6d32dab440874670aca93 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 1.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS11705 b399a26a53c6d32dab440874670aca93 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 1.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS11705 b399a26a53c6d32dab440874670aca93 610 SMART SM00448 483 595 5.1E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS11705 b399a26a53c6d32dab440874670aca93 610 SUPERFAMILY SSF52172 485 606 2.56E-25 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS11705 b399a26a53c6d32dab440874670aca93 610 SUPERFAMILY SSF47384 217 299 1.0E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS11705 b399a26a53c6d32dab440874670aca93 610 Gene3D G3DSA:1.10.287.130 227 295 5.0E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS03115 374f906c22761bcb8f8632b868a702b3 531 Gene3D G3DSA:1.10.8.60 32 115 1.4E-32 T 22-04-2016 RPIC12D_RS03115 374f906c22761bcb8f8632b868a702b3 531 SMART SM01086 398 489 3.0E-25 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RPIC12D_RS03115 374f906c22761bcb8f8632b868a702b3 531 PANTHER PTHR11638 8 510 1.9E-281 T 22-04-2016 RPIC12D_RS03115 374f906c22761bcb8f8632b868a702b3 531 SUPERFAMILY SSF52540 9 153 1.45E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03115 374f906c22761bcb8f8632b868a702b3 531 Gene3D G3DSA:1.10.8.60 409 497 6.3E-24 T 22-04-2016 RPIC12D_RS03115 374f906c22761bcb8f8632b868a702b3 531 PANTHER PTHR11638:SF80 8 510 1.9E-281 T 22-04-2016 RPIC12D_RS03115 374f906c22761bcb8f8632b868a702b3 531 Pfam PF07724 AAA domain (Cdc48 subfamily) 223 392 5.1E-52 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS03115 374f906c22761bcb8f8632b868a702b3 531 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 228 246 1.7E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC12D_RS03115 374f906c22761bcb8f8632b868a702b3 531 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 273 291 1.7E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC12D_RS03115 374f906c22761bcb8f8632b868a702b3 531 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 302 320 1.7E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC12D_RS03115 374f906c22761bcb8f8632b868a702b3 531 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 335 349 1.7E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC12D_RS03115 374f906c22761bcb8f8632b868a702b3 531 SUPERFAMILY SSF52540 173 470 3.73E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03115 374f906c22761bcb8f8632b868a702b3 531 SMART SM00382 224 371 6.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS03115 374f906c22761bcb8f8632b868a702b3 531 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 398 475 8.4E-21 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RPIC12D_RS03115 374f906c22761bcb8f8632b868a702b3 531 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 258 276 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 RPIC12D_RS03115 374f906c22761bcb8f8632b868a702b3 531 Gene3D G3DSA:3.40.50.300 178 408 2.9E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01970 0eadc616c0dd715c9d314bd91ad558d2 77 PIRSF PIRSF002097 1 77 2.8E-35 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 RPIC12D_RS01970 0eadc616c0dd715c9d314bd91ad558d2 77 Pfam PF02954 Bacterial regulatory protein, Fis family 34 74 4.8E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS01970 0eadc616c0dd715c9d314bd91ad558d2 77 SUPERFAMILY SSF46689 8 76 1.04E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS01970 0eadc616c0dd715c9d314bd91ad558d2 77 Gene3D G3DSA:1.10.10.60 7 76 1.0E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS01970 0eadc616c0dd715c9d314bd91ad558d2 77 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 40 57 2.2E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS01970 0eadc616c0dd715c9d314bd91ad558d2 77 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 57 77 2.2E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS01970 0eadc616c0dd715c9d314bd91ad558d2 77 PRINTS PR01591 DNA-binding protein FIS signature 21 36 8.8E-6 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 RPIC12D_RS01970 0eadc616c0dd715c9d314bd91ad558d2 77 PRINTS PR01591 DNA-binding protein FIS signature 5 21 8.8E-6 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 RPIC12D_RS01970 0eadc616c0dd715c9d314bd91ad558d2 77 PRINTS PR01591 DNA-binding protein FIS signature 36 48 8.8E-6 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 RPIC12D_RS01970 0eadc616c0dd715c9d314bd91ad558d2 77 PANTHER PTHR32071 2 76 2.1E-17 T 22-04-2016 RPIC12D_RS01950 5be6066b4f5695e53e65a7c39befcdba 193 SMART SM00278 108 127 0.0016 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RPIC12D_RS01950 5be6066b4f5695e53e65a7c39befcdba 193 SMART SM00278 73 92 10.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RPIC12D_RS01950 5be6066b4f5695e53e65a7c39befcdba 193 SUPERFAMILY SSF46929 151 192 9.94E-9 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RPIC12D_RS01950 5be6066b4f5695e53e65a7c39befcdba 193 Gene3D G3DSA:2.40.50.140 1 65 5.7E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS01950 5be6066b4f5695e53e65a7c39befcdba 193 Pfam PF01330 RuvA N terminal domain 1 62 3.5E-21 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 RPIC12D_RS01950 5be6066b4f5695e53e65a7c39befcdba 193 Gene3D G3DSA:1.10.8.10 151 190 1.4E-7 T 22-04-2016 RPIC12D_RS01950 5be6066b4f5695e53e65a7c39befcdba 193 Gene3D G3DSA:1.10.150.20 67 133 8.4E-29 T 22-04-2016 RPIC12D_RS01950 5be6066b4f5695e53e65a7c39befcdba 193 Pfam PF14520 Helix-hairpin-helix domain 72 129 9.7E-18 T 22-04-2016 RPIC12D_RS01950 5be6066b4f5695e53e65a7c39befcdba 193 PANTHER PTHR33796 2 193 1.0E-71 T 22-04-2016 RPIC12D_RS01950 5be6066b4f5695e53e65a7c39befcdba 193 SUPERFAMILY SSF50249 1 63 8.57E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS01950 5be6066b4f5695e53e65a7c39befcdba 193 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 189 9.9E-53 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RPIC12D_RS01950 5be6066b4f5695e53e65a7c39befcdba 193 Pfam PF07499 RuvA, C-terminal domain 151 191 3.8E-12 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RPIC12D_RS01950 5be6066b4f5695e53e65a7c39befcdba 193 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 191 31.223 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RPIC12D_RS01950 5be6066b4f5695e53e65a7c39befcdba 193 SUPERFAMILY SSF47781 65 132 2.19E-20 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RPIC12D_RS08330 b9c20c12980d5caf74f6849ee1c1b459 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 156 184 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC12D_RS08330 b9c20c12980d5caf74f6849ee1c1b459 261 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 190 0.003 T 22-04-2016 RPIC12D_RS08330 b9c20c12980d5caf74f6849ee1c1b459 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 6.4E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08330 b9c20c12980d5caf74f6849ee1c1b459 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 6.4E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08330 b9c20c12980d5caf74f6849ee1c1b459 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 6.4E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08330 b9c20c12980d5caf74f6849ee1c1b459 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 6.4E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08330 b9c20c12980d5caf74f6849ee1c1b459 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 6.4E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08330 b9c20c12980d5caf74f6849ee1c1b459 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 6.4E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08330 b9c20c12980d5caf74f6849ee1c1b459 261 SUPERFAMILY SSF51735 5 260 3.23E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS08330 b9c20c12980d5caf74f6849ee1c1b459 261 Gene3D G3DSA:3.40.50.720 6 261 5.2E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS08330 b9c20c12980d5caf74f6849ee1c1b459 261 PANTHER PTHR24322 169 201 3.0E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08330 b9c20c12980d5caf74f6849ee1c1b459 261 PANTHER PTHR24322 14 138 3.0E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08330 b9c20c12980d5caf74f6849ee1c1b459 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08330 b9c20c12980d5caf74f6849ee1c1b459 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 1.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08330 b9c20c12980d5caf74f6849ee1c1b459 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 1.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08330 b9c20c12980d5caf74f6849ee1c1b459 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 260 9.3E-59 T 22-04-2016 RPIC12D_RS10590 cf2eaa59c38962b5ee965142e3a1e1cb 873 Gene3D G3DSA:2.170.130.10 46 182 6.8E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS10590 cf2eaa59c38962b5ee965142e3a1e1cb 873 SUPERFAMILY SSF56935 37 348 6.72E-97 T 22-04-2016 RPIC12D_RS10590 cf2eaa59c38962b5ee965142e3a1e1cb 873 SUPERFAMILY SSF56935 586 863 6.72E-97 T 22-04-2016 RPIC12D_RS10590 cf2eaa59c38962b5ee965142e3a1e1cb 873 SUPERFAMILY SSF56935 378 529 6.72E-97 T 22-04-2016 RPIC12D_RS10590 cf2eaa59c38962b5ee965142e3a1e1cb 873 PANTHER PTHR32552 26 321 1.7E-38 T 22-04-2016 RPIC12D_RS10590 cf2eaa59c38962b5ee965142e3a1e1cb 873 PANTHER PTHR32552 411 526 1.7E-38 T 22-04-2016 RPIC12D_RS10590 cf2eaa59c38962b5ee965142e3a1e1cb 873 PANTHER PTHR32552 578 863 1.7E-38 T 22-04-2016 RPIC12D_RS10590 cf2eaa59c38962b5ee965142e3a1e1cb 873 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 180 1.4E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS10590 cf2eaa59c38962b5ee965142e3a1e1cb 873 Pfam PF00593 TonB dependent receptor 596 862 4.9E-35 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS10590 cf2eaa59c38962b5ee965142e3a1e1cb 873 Gene3D G3DSA:2.40.170.20 581 863 2.7E-88 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS10590 cf2eaa59c38962b5ee965142e3a1e1cb 873 Gene3D G3DSA:2.40.170.20 183 331 2.7E-88 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS10590 cf2eaa59c38962b5ee965142e3a1e1cb 873 Gene3D G3DSA:2.40.170.20 378 524 2.7E-88 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS12655 7fb9cec06ffc8f3ed15b994a202aa7fb 307 Pfam PF16916 Dimerisation domain of Zinc Transporter 223 299 2.0E-21 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RPIC12D_RS12655 7fb9cec06ffc8f3ed15b994a202aa7fb 307 SUPERFAMILY SSF160240 221 299 6.67E-21 T 22-04-2016 RPIC12D_RS12655 7fb9cec06ffc8f3ed15b994a202aa7fb 307 PANTHER PTHR11562 16 299 2.3E-86 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC12D_RS12655 7fb9cec06ffc8f3ed15b994a202aa7fb 307 SUPERFAMILY SSF161111 18 219 2.48E-54 T 22-04-2016 RPIC12D_RS12655 7fb9cec06ffc8f3ed15b994a202aa7fb 307 Gene3D G3DSA:3.30.70.1350 219 299 1.1E-23 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RPIC12D_RS12655 7fb9cec06ffc8f3ed15b994a202aa7fb 307 Gene3D G3DSA:1.20.1510.10 21 218 4.7E-48 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RPIC12D_RS12655 7fb9cec06ffc8f3ed15b994a202aa7fb 307 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 21 299 8.7E-66 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC12D_RS12655 7fb9cec06ffc8f3ed15b994a202aa7fb 307 PANTHER PTHR11562:SF18 16 299 2.3E-86 T 22-04-2016 RPIC12D_RS12655 7fb9cec06ffc8f3ed15b994a202aa7fb 307 Pfam PF01545 Cation efflux family 25 218 1.2E-46 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC12D_RS00510 b64ec385c17856f93c2525ea0774feea 327 SUPERFAMILY SSF51412 12 313 1.01E-55 T 22-04-2016 RPIC12D_RS00510 b64ec385c17856f93c2525ea0774feea 327 PANTHER PTHR32332 6 317 3.1E-146 T 22-04-2016 RPIC12D_RS00510 b64ec385c17856f93c2525ea0774feea 327 Pfam PF03060 Nitronate monooxygenase 93 310 1.9E-21 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RPIC12D_RS00510 b64ec385c17856f93c2525ea0774feea 327 Gene3D G3DSA:3.20.20.70 13 307 8.6E-45 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS00510 b64ec385c17856f93c2525ea0774feea 327 PANTHER PTHR32332:SF21 6 317 3.1E-146 T 22-04-2016 RPIC12D_RS06535 00601fd92be22e4e77be34c8ba0bf0b6 232 Gene3D G3DSA:1.10.150.240 18 90 1.5E-28 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RPIC12D_RS06535 00601fd92be22e4e77be34c8ba0bf0b6 232 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 6 189 8.7E-27 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS06535 00601fd92be22e4e77be34c8ba0bf0b6 232 PANTHER PTHR12725 1 228 2.0E-23 T 22-04-2016 RPIC12D_RS06535 00601fd92be22e4e77be34c8ba0bf0b6 232 SUPERFAMILY SSF56784 4 226 7.98E-49 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS06535 00601fd92be22e4e77be34c8ba0bf0b6 232 Gene3D G3DSA:3.40.50.1000 91 225 1.1E-38 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS06535 00601fd92be22e4e77be34c8ba0bf0b6 232 Pfam PF00702 haloacid dehalogenase-like hydrolase 4 185 7.9E-12 T 22-04-2016 RPIC12D_RS06535 00601fd92be22e4e77be34c8ba0bf0b6 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.1E-32 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS06535 00601fd92be22e4e77be34c8ba0bf0b6 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 187 200 1.1E-32 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS06535 00601fd92be22e4e77be34c8ba0bf0b6 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 30 43 1.1E-32 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS06535 00601fd92be22e4e77be34c8ba0bf0b6 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 160 180 1.1E-32 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS06535 00601fd92be22e4e77be34c8ba0bf0b6 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 111 124 1.1E-32 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS06535 00601fd92be22e4e77be34c8ba0bf0b6 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 142 158 1.1E-32 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS06535 00601fd92be22e4e77be34c8ba0bf0b6 232 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 4 204 2.1E-72 T 22-04-2016 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 RPIC12D_RS01820 08b57af3164fe8706bac8bfd97621147 321 Gene3D G3DSA:3.40.50.10170 9 172 9.6E-22 T 22-04-2016 RPIC12D_RS01820 08b57af3164fe8706bac8bfd97621147 321 PANTHER PTHR33434 10 317 1.2E-25 T 22-04-2016 RPIC12D_RS01820 08b57af3164fe8706bac8bfd97621147 321 Pfam PF02645 Uncharacterised protein, DegV family COG1307 10 315 9.7E-39 T 22-04-2016 IPR003797 DegV RPIC12D_RS01820 08b57af3164fe8706bac8bfd97621147 321 Gene3D G3DSA:3.30.1180.10 176 315 3.3E-16 T 22-04-2016 RPIC12D_RS01820 08b57af3164fe8706bac8bfd97621147 321 SUPERFAMILY SSF82549 8 314 1.28E-44 T 22-04-2016 RPIC12D_RS01820 08b57af3164fe8706bac8bfd97621147 321 PANTHER PTHR33434:SF2 10 317 1.2E-25 T 22-04-2016 RPIC12D_RS02495 930f60f8e939666562461f28a7d5dabd 240 Gene3D G3DSA:1.10.10.10 27 99 3.0E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS02495 930f60f8e939666562461f28a7d5dabd 240 SUPERFAMILY SSF48008 103 238 8.89E-30 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC12D_RS02495 930f60f8e939666562461f28a7d5dabd 240 SUPERFAMILY SSF46785 33 101 3.31E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS02495 930f60f8e939666562461f28a7d5dabd 240 Pfam PF07729 FCD domain 107 230 1.7E-27 T 22-04-2016 IPR011711 GntR, C-terminal RPIC12D_RS02495 930f60f8e939666562461f28a7d5dabd 240 SMART SM00345 39 97 2.2E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS02495 930f60f8e939666562461f28a7d5dabd 240 PANTHER PTHR11751 34 123 6.6E-22 T 22-04-2016 RPIC12D_RS02495 930f60f8e939666562461f28a7d5dabd 240 SMART SM00895 107 231 7.5E-21 T 22-04-2016 IPR011711 GntR, C-terminal RPIC12D_RS02495 930f60f8e939666562461f28a7d5dabd 240 Gene3D G3DSA:1.20.120.530 100 238 3.7E-33 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC12D_RS02495 930f60f8e939666562461f28a7d5dabd 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 39 97 1.9E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 Gene3D G3DSA:3.30.70.1430 38 140 6.0E-31 T 22-04-2016 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 Pfam PF00873 AcrB/AcrD/AcrF family 1 1026 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 Gene3D G3DSA:3.30.70.1430 568 670 1.3E-32 T 22-04-2016 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 SUPERFAMILY SSF82866 806 1028 7.19E-42 T 22-04-2016 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 Gene3D G3DSA:3.30.2090.10 181 274 2.5E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 PANTHER PTHR32063:SF13 1 1048 0.0 T 22-04-2016 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 SUPERFAMILY SSF82866 296 497 9.42E-53 T 22-04-2016 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 8.8E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 8.8E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 8.8E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 8.8E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 8.8E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 8.8E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 8.8E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 8.8E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 8.8E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 PANTHER PTHR32063 1 1048 0.0 T 22-04-2016 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 Gene3D G3DSA:1.10.3850.10 279 498 7.9E-63 T 22-04-2016 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 Gene3D G3DSA:1.10.3850.10 814 1027 1.2E-53 T 22-04-2016 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 SUPERFAMILY SSF82714 722 807 2.49E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 SUPERFAMILY SSF82693 38 129 1.46E-22 T 22-04-2016 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 Gene3D G3DSA:3.30.2090.10 722 806 8.2E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 SUPERFAMILY SSF82693 135 182 4.71E-24 T 22-04-2016 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 SUPERFAMILY SSF82693 274 330 4.71E-24 T 22-04-2016 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1043 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 SUPERFAMILY SSF82693 566 670 1.7E-28 T 22-04-2016 RPIC12D_RS04550 d97269a42343c77473166436092c343b 1051 SUPERFAMILY SSF82714 182 271 3.27E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 SUPERFAMILY SSF82866 808 1029 1.1E-42 T 22-04-2016 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 Gene3D G3DSA:3.30.70.1430 38 140 3.7E-32 T 22-04-2016 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 SUPERFAMILY SSF82714 183 272 1.26E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 SUPERFAMILY SSF82866 299 498 3.14E-51 T 22-04-2016 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 SUPERFAMILY SSF82693 136 183 4.19E-26 T 22-04-2016 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 SUPERFAMILY SSF82693 275 331 4.19E-26 T 22-04-2016 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 Gene3D G3DSA:3.30.2090.10 722 807 4.0E-27 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 SUPERFAMILY SSF82693 567 671 1.07E-30 T 22-04-2016 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 Gene3D G3DSA:3.30.70.1430 569 671 7.7E-36 T 22-04-2016 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 PANTHER PTHR32063:SF13 1 1038 0.0 T 22-04-2016 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 8.5E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 8.5E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 8.5E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 8.5E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 8.5E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 8.5E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 8.5E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 8.5E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 8.5E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 Gene3D G3DSA:3.30.2090.10 182 275 4.3E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 SUPERFAMILY SSF82693 38 132 7.32E-24 T 22-04-2016 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 Gene3D G3DSA:1.10.3850.10 816 1028 4.1E-56 T 22-04-2016 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 Gene3D G3DSA:1.10.3850.10 281 499 4.9E-63 T 22-04-2016 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1037 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 SUPERFAMILY SSF82714 723 807 5.75E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC12D_RS17170 c89199ceef4aae0fba2d90c5936286a7 1050 PANTHER PTHR32063 1 1038 0.0 T 22-04-2016 RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 PANTHER PTHR11390 1 503 8.6E-153 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 PANTHER PTHR11390 520 667 8.6E-153 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 Gene3D G3DSA:1.10.460.10 156 214 3.8E-52 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 Gene3D G3DSA:1.10.460.10 490 611 3.8E-52 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 SUPERFAMILY SSF56712 3 610 3.79E-175 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 Gene3D G3DSA:3.40.50.140 4 152 6.6E-42 T 22-04-2016 IPR006171 Toprim domain RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 SMART SM00437 279 557 4.1E-76 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 Gene3D G3DSA:2.70.20.10 215 339 2.0E-23 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 Gene3D G3DSA:2.70.20.10 370 487 3.2E-18 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 Pfam PF13342 C-terminal repeat of topoisomerase 754 814 2.2E-18 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 Pfam PF13342 C-terminal repeat of topoisomerase 647 708 3.5E-21 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 331 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 Pfam PF01751 Toprim domain 5 131 1.1E-10 T 22-04-2016 IPR006171 Toprim domain RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 SMART SM00493 3 126 5.7E-12 T 22-04-2016 IPR006171 Toprim domain RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 615 3.7E-171 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 Pfam PF01131 DNA topoisomerase 154 595 2.4E-117 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 SMART SM00436 126 221 6.1E-26 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 322 331 3.9E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 3.9E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 520 534 3.9E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 405 421 3.9E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS16850 955edab1c9a12db01ad688012b8a95a1 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 3.9E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS05480 2d4a234ba487c72b98cb508ac78d64cc 605 Pfam PF02203 Tar ligand binding domain homologue 5 170 4.5E-18 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS05480 2d4a234ba487c72b98cb508ac78d64cc 605 SUPERFAMILY SSF58104 238 519 1.96E-70 T 22-04-2016 RPIC12D_RS05480 2d4a234ba487c72b98cb508ac78d64cc 605 SMART SM00283 271 518 2.7E-83 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS05480 2d4a234ba487c72b98cb508ac78d64cc 605 SUPERFAMILY SSF47170 32 179 1.15E-10 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS05480 2d4a234ba487c72b98cb508ac78d64cc 605 SMART SM00304 218 270 9.7E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS05480 2d4a234ba487c72b98cb508ac78d64cc 605 Pfam PF00672 HAMP domain 200 266 1.1E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS05480 2d4a234ba487c72b98cb508ac78d64cc 605 PANTHER PTHR32089 132 521 7.2E-148 T 22-04-2016 RPIC12D_RS05480 2d4a234ba487c72b98cb508ac78d64cc 605 PANTHER PTHR32089:SF63 132 521 7.2E-148 T 22-04-2016 RPIC12D_RS05480 2d4a234ba487c72b98cb508ac78d64cc 605 Gene3D G3DSA:1.10.287.950 286 490 1.1E-57 T 22-04-2016 RPIC12D_RS05480 2d4a234ba487c72b98cb508ac78d64cc 605 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 7.0E-56 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS05480 2d4a234ba487c72b98cb508ac78d64cc 605 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 7.0E-56 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS05480 2d4a234ba487c72b98cb508ac78d64cc 605 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 8 33 7.0E-56 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS05480 2d4a234ba487c72b98cb508ac78d64cc 605 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 292 321 7.0E-56 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS05480 2d4a234ba487c72b98cb508ac78d64cc 605 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 446 475 7.0E-56 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS05480 2d4a234ba487c72b98cb508ac78d64cc 605 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 517 4.6E-58 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS06340 3bbe103b797e135136101d65b88017e8 413 Gene3D G3DSA:3.90.1150.10 280 404 3.1E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS06340 3bbe103b797e135136101d65b88017e8 413 PANTHER PTHR11751:SF303 9 405 5.0E-169 T 22-04-2016 RPIC12D_RS06340 3bbe103b797e135136101d65b88017e8 413 Pfam PF00155 Aminotransferase class I and II 55 395 4.3E-50 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC12D_RS06340 3bbe103b797e135136101d65b88017e8 413 SUPERFAMILY SSF53383 5 402 2.2E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS06340 3bbe103b797e135136101d65b88017e8 413 Gene3D G3DSA:3.40.640.10 60 279 1.8E-65 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS06340 3bbe103b797e135136101d65b88017e8 413 PANTHER PTHR11751 9 405 5.0E-169 T 22-04-2016 RPIC12D_RS00060 74e42df27f473da326154432e1972a50 275 PANTHER PTHR18966:SF191 28 266 1.5E-42 T 22-04-2016 RPIC12D_RS00060 74e42df27f473da326154432e1972a50 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 268 6.0E-51 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS00060 74e42df27f473da326154432e1972a50 275 Gene3D G3DSA:3.40.190.10 156 214 1.1E-11 T 22-04-2016 RPIC12D_RS00060 74e42df27f473da326154432e1972a50 275 Gene3D G3DSA:3.40.190.10 30 155 2.8E-39 T 22-04-2016 RPIC12D_RS00060 74e42df27f473da326154432e1972a50 275 SMART SM00079 50 269 0.0054 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 RPIC12D_RS00060 74e42df27f473da326154432e1972a50 275 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 73 86 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 RPIC12D_RS00060 74e42df27f473da326154432e1972a50 275 PANTHER PTHR18966 28 266 1.5E-42 T 22-04-2016 RPIC12D_RS00060 74e42df27f473da326154432e1972a50 275 SUPERFAMILY SSF53850 23 269 8.15E-55 T 22-04-2016 RPIC12D_RS00060 74e42df27f473da326154432e1972a50 275 SMART SM00062 50 270 1.5E-46 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS02975 49bc7b6f5d8bc3acd755e7fd6dd75477 223 Pfam PF13649 Methyltransferase domain 53 144 8.1E-13 T 22-04-2016 RPIC12D_RS02975 49bc7b6f5d8bc3acd755e7fd6dd75477 223 Gene3D G3DSA:3.40.50.150 18 155 6.0E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS02975 49bc7b6f5d8bc3acd755e7fd6dd75477 223 PANTHER PTHR10108 40 154 1.0E-16 T 22-04-2016 RPIC12D_RS02975 49bc7b6f5d8bc3acd755e7fd6dd75477 223 SUPERFAMILY SSF53335 31 154 7.12E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS18745 f4a1e9e487a24f1655bc760844590147 420 Pfam PF04963 Sigma-54 factor, core binding domain 110 299 2.5E-56 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 RPIC12D_RS18745 f4a1e9e487a24f1655bc760844590147 420 PIRSF PIRSF000774 1 420 9.9E-115 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS18745 f4a1e9e487a24f1655bc760844590147 420 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 360 379 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS18745 f4a1e9e487a24f1655bc760844590147 420 PRINTS PR00045 Sigma-54 factor signature 388 399 3.2E-18 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS18745 f4a1e9e487a24f1655bc760844590147 420 PRINTS PR00045 Sigma-54 factor signature 372 384 3.2E-18 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS18745 f4a1e9e487a24f1655bc760844590147 420 PRINTS PR00045 Sigma-54 factor signature 184 201 3.2E-18 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS18745 f4a1e9e487a24f1655bc760844590147 420 Pfam PF04552 Sigma-54, DNA binding domain 314 420 5.7E-43 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding RPIC12D_RS18745 f4a1e9e487a24f1655bc760844590147 420 PANTHER PTHR32248 1 31 2.1E-102 T 22-04-2016 RPIC12D_RS18745 f4a1e9e487a24f1655bc760844590147 420 PANTHER PTHR32248 51 420 2.1E-102 T 22-04-2016 RPIC12D_RS18745 f4a1e9e487a24f1655bc760844590147 420 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 1 420 5.2E-107 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS06780 7df32c4e54fa92ff5d4111673dadab4c 765 Pfam PF07244 Surface antigen variable number repeat 182 269 8.9E-21 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 RPIC12D_RS06780 7df32c4e54fa92ff5d4111673dadab4c 765 Pfam PF07244 Surface antigen variable number repeat 31 97 2.4E-5 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 RPIC12D_RS06780 7df32c4e54fa92ff5d4111673dadab4c 765 Pfam PF07244 Surface antigen variable number repeat 272 350 4.1E-13 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 RPIC12D_RS06780 7df32c4e54fa92ff5d4111673dadab4c 765 Pfam PF07244 Surface antigen variable number repeat 353 427 2.3E-13 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 RPIC12D_RS06780 7df32c4e54fa92ff5d4111673dadab4c 765 Pfam PF07244 Surface antigen variable number repeat 99 178 1.8E-14 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 RPIC12D_RS06780 7df32c4e54fa92ff5d4111673dadab4c 765 Gene3D G3DSA:2.40.160.50 402 764 4.5E-24 T 22-04-2016 RPIC12D_RS06780 7df32c4e54fa92ff5d4111673dadab4c 765 PANTHER PTHR12815 10 765 4.6E-233 T 22-04-2016 RPIC12D_RS06780 7df32c4e54fa92ff5d4111673dadab4c 765 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 7 765 25.593 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RPIC12D_RS06780 7df32c4e54fa92ff5d4111673dadab4c 765 PIRSF PIRSF006076 2 765 3.8E-255 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RPIC12D_RS06780 7df32c4e54fa92ff5d4111673dadab4c 765 Pfam PF01103 Surface antigen 454 765 8.1E-82 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 RPIC12D_RS06780 7df32c4e54fa92ff5d4111673dadab4c 765 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 30 765 2.6E-278 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RPIC12D_RS06780 7df32c4e54fa92ff5d4111673dadab4c 765 PANTHER PTHR12815:SF11 10 765 4.6E-233 T 22-04-2016 RPIC12D_RS24605 5fcc99530360cdc3b9eb2727f9c6fdd9 133 Gene3D G3DSA:3.40.50.20 2 119 1.4E-45 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS24605 5fcc99530360cdc3b9eb2727f9c6fdd9 133 SUPERFAMILY SSF52440 2 112 3.74E-38 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS24605 5fcc99530360cdc3b9eb2727f9c6fdd9 133 PANTHER PTHR21621 1 133 2.5E-30 T 22-04-2016 RPIC12D_RS24605 5fcc99530360cdc3b9eb2727f9c6fdd9 133 PANTHER PTHR21621:SF4 1 133 2.5E-30 T 22-04-2016 RPIC12D_RS24605 5fcc99530360cdc3b9eb2727f9c6fdd9 133 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 110 7.9E-40 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RPIC12D_RS15225 2d92f381dfee4e6d050289cd7e2b8c86 185 PANTHER PTHR10204 4 178 1.2E-53 T 22-04-2016 RPIC12D_RS15225 2d92f381dfee4e6d050289cd7e2b8c86 185 Pfam PF02525 Flavodoxin-like fold 5 171 1.0E-45 T 22-04-2016 IPR003680 Flavodoxin-like fold RPIC12D_RS15225 2d92f381dfee4e6d050289cd7e2b8c86 185 SUPERFAMILY SSF52218 4 176 7.78E-49 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC12D_RS15225 2d92f381dfee4e6d050289cd7e2b8c86 185 Gene3D G3DSA:3.40.50.360 4 176 8.6E-48 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC12D_RS15225 2d92f381dfee4e6d050289cd7e2b8c86 185 PANTHER PTHR10204:SF42 4 178 1.2E-53 T 22-04-2016 RPIC12D_RS02400 aa54bccaef0d6d91a770dc90cca4f711 307 Pfam PF01259 SAICAR synthetase 21 268 8.3E-99 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RPIC12D_RS02400 aa54bccaef0d6d91a770dc90cca4f711 307 ProSitePatterns PS01058 SAICAR synthetase signature 2. 210 218 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RPIC12D_RS02400 aa54bccaef0d6d91a770dc90cca4f711 307 Gene3D G3DSA:3.30.470.20 123 253 4.0E-54 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC12D_RS02400 aa54bccaef0d6d91a770dc90cca4f711 307 SUPERFAMILY SSF56104 10 305 1.7E-101 T 22-04-2016 RPIC12D_RS02400 aa54bccaef0d6d91a770dc90cca4f711 307 Gene3D G3DSA:3.30.200.20 10 122 6.1E-42 T 22-04-2016 RPIC12D_RS02400 aa54bccaef0d6d91a770dc90cca4f711 307 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 21 303 2.1E-78 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RPIC12D_RS02400 aa54bccaef0d6d91a770dc90cca4f711 307 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 18 303 25.263 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RPIC12D_RS02400 aa54bccaef0d6d91a770dc90cca4f711 307 PANTHER PTHR11609 15 307 1.3E-143 T 22-04-2016 RPIC12D_RS02400 aa54bccaef0d6d91a770dc90cca4f711 307 ProSitePatterns PS01057 SAICAR synthetase signature 1. 111 125 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RPIC12D_RS02400 aa54bccaef0d6d91a770dc90cca4f711 307 PANTHER PTHR11609:SF6 15 307 1.3E-143 T 22-04-2016 RPIC12D_RS06730 b13526604e1c9d4877ae8518eefd89f0 862 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 24 858 2.6E-241 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RPIC12D_RS06730 b13526604e1c9d4877ae8518eefd89f0 862 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 862 328.406 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RPIC12D_RS06730 b13526604e1c9d4877ae8518eefd89f0 862 SMART SM00471 438 585 6.4E-4 T 22-04-2016 IPR003607 HD/PDEase domain RPIC12D_RS06730 b13526604e1c9d4877ae8518eefd89f0 862 SUPERFAMILY SSF55021 789 844 1.17E-9 T 22-04-2016 RPIC12D_RS06730 b13526604e1c9d4877ae8518eefd89f0 862 PANTHER PTHR13734:SF45 84 674 2.8E-97 T 22-04-2016 RPIC12D_RS06730 b13526604e1c9d4877ae8518eefd89f0 862 Pfam PF08335 GlnD PII-uridylyltransferase 167 304 8.1E-33 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RPIC12D_RS06730 b13526604e1c9d4877ae8518eefd89f0 862 Gene3D G3DSA:3.30.460.10 63 154 6.2E-8 T 22-04-2016 RPIC12D_RS06730 b13526604e1c9d4877ae8518eefd89f0 862 SUPERFAMILY SSF81301 27 158 5.23E-22 T 22-04-2016 RPIC12D_RS06730 b13526604e1c9d4877ae8518eefd89f0 862 SUPERFAMILY SSF55021 680 750 3.82E-10 T 22-04-2016 RPIC12D_RS06730 b13526604e1c9d4877ae8518eefd89f0 862 Pfam PF01966 HD domain 443 563 6.4E-10 T 22-04-2016 IPR006674 HD domain RPIC12D_RS06730 b13526604e1c9d4877ae8518eefd89f0 862 SUPERFAMILY SSF81593 170 298 2.2E-11 T 22-04-2016 RPIC12D_RS06730 b13526604e1c9d4877ae8518eefd89f0 862 Gene3D G3DSA:3.30.70.260 789 853 4.2E-12 T 22-04-2016 RPIC12D_RS06730 b13526604e1c9d4877ae8518eefd89f0 862 Gene3D G3DSA:3.30.70.260 680 753 2.7E-6 T 22-04-2016 RPIC12D_RS06730 b13526604e1c9d4877ae8518eefd89f0 862 Pfam PF03445 Putative nucleotidyltransferase DUF294 24 106 3.3E-7 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 RPIC12D_RS06730 b13526604e1c9d4877ae8518eefd89f0 862 Gene3D G3DSA:1.10.3210.10 412 599 2.0E-24 T 22-04-2016 IPR006674 HD domain RPIC12D_RS06730 b13526604e1c9d4877ae8518eefd89f0 862 SUPERFAMILY SSF109604 409 534 2.32E-14 T 22-04-2016 RPIC12D_RS06730 b13526604e1c9d4877ae8518eefd89f0 862 PANTHER PTHR13734 84 674 2.8E-97 T 22-04-2016 RPIC12D_RS06730 b13526604e1c9d4877ae8518eefd89f0 862 PIRSF PIRSF006288 1 862 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RPIC12D_RS16535 e5b9eb6e2b72cc11dadb5aa62f812769 90 PANTHER PTHR33677:SF1 1 90 2.6E-37 T 22-04-2016 RPIC12D_RS16535 e5b9eb6e2b72cc11dadb5aa62f812769 90 PANTHER PTHR33677 1 90 2.6E-37 T 22-04-2016 RPIC12D_RS16535 e5b9eb6e2b72cc11dadb5aa62f812769 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 2.1E-20 T 22-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 RPIC12D_RS00090 a43f537de9519222c567ab258c5d23b2 232 Gene3D G3DSA:1.10.10.10 153 225 7.2E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00090 a43f537de9519222c567ab258c5d23b2 232 PANTHER PTHR24567:SF30 12 225 1.5E-33 T 22-04-2016 RPIC12D_RS00090 a43f537de9519222c567ab258c5d23b2 232 Pfam PF13545 Crp-like helix-turn-helix domain 156 225 1.7E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS00090 a43f537de9519222c567ab258c5d23b2 232 Gene3D G3DSA:2.60.120.10 15 148 7.3E-17 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS00090 a43f537de9519222c567ab258c5d23b2 232 SUPERFAMILY SSF46785 153 225 1.92E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00090 a43f537de9519222c567ab258c5d23b2 232 PANTHER PTHR24567 12 225 1.5E-33 T 22-04-2016 RPIC12D_RS00090 a43f537de9519222c567ab258c5d23b2 232 SUPERFAMILY SSF51206 13 146 5.37E-21 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like RPIC12D_RS00090 a43f537de9519222c567ab258c5d23b2 232 Pfam PF00027 Cyclic nucleotide-binding domain 37 123 8.6E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC12D_RS00090 a43f537de9519222c567ab258c5d23b2 232 SMART SM00419 172 220 3.6E-6 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS09860 5120c54b57e3f73e89e66df562177567 221 Hamap MF_00328 Guanylate kinase [gmk]. 18 201 35.049 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RPIC12D_RS09860 5120c54b57e3f73e89e66df562177567 221 Gene3D G3DSA:3.30.63.10 58 101 5.4E-26 T 22-04-2016 RPIC12D_RS09860 5120c54b57e3f73e89e66df562177567 221 ProSitePatterns PS00856 Guanylate kinase-like signature. 54 71 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RPIC12D_RS09860 5120c54b57e3f73e89e66df562177567 221 SMART SM00072 19 201 1.0E-52 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RPIC12D_RS09860 5120c54b57e3f73e89e66df562177567 221 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 21 198 9.7E-70 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RPIC12D_RS09860 5120c54b57e3f73e89e66df562177567 221 SUPERFAMILY SSF52540 18 203 6.03E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09860 5120c54b57e3f73e89e66df562177567 221 Gene3D G3DSA:3.40.50.300 102 214 9.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09860 5120c54b57e3f73e89e66df562177567 221 Gene3D G3DSA:3.40.50.300 19 32 9.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09860 5120c54b57e3f73e89e66df562177567 221 Gene3D G3DSA:3.40.50.300 33 57 1.9E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09860 5120c54b57e3f73e89e66df562177567 221 PANTHER PTHR23117 19 221 1.8E-81 T 22-04-2016 RPIC12D_RS09860 5120c54b57e3f73e89e66df562177567 221 Pfam PF00625 Guanylate kinase 23 199 4.8E-46 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RPIC12D_RS06055 73555a45fe3b929e64108fe7342bd12b 215 Gene3D G3DSA:1.10.10.10 138 211 4.5E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06055 73555a45fe3b929e64108fe7342bd12b 215 Pfam PF13545 Crp-like helix-turn-helix domain 135 208 4.4E-19 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS06055 73555a45fe3b929e64108fe7342bd12b 215 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 191 4.6E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS06055 73555a45fe3b929e64108fe7342bd12b 215 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 160 176 4.6E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS06055 73555a45fe3b929e64108fe7342bd12b 215 SUPERFAMILY SSF51206 3 128 2.49E-25 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like RPIC12D_RS06055 73555a45fe3b929e64108fe7342bd12b 215 SMART SM00419 154 202 1.2E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS06055 73555a45fe3b929e64108fe7342bd12b 215 PANTHER PTHR24567 1 208 4.8E-66 T 22-04-2016 RPIC12D_RS06055 73555a45fe3b929e64108fe7342bd12b 215 PANTHER PTHR24567:SF28 1 208 4.8E-66 T 22-04-2016 RPIC12D_RS06055 73555a45fe3b929e64108fe7342bd12b 215 SUPERFAMILY SSF46785 133 210 4.76E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06055 73555a45fe3b929e64108fe7342bd12b 215 SMART SM00100 1 115 3.9E-7 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC12D_RS06055 73555a45fe3b929e64108fe7342bd12b 215 Pfam PF00027 Cyclic nucleotide-binding domain 17 99 2.3E-13 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC12D_RS06055 73555a45fe3b929e64108fe7342bd12b 215 Gene3D G3DSA:2.60.120.10 14 137 8.5E-23 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS16430 40ce9938713d5363c7f61fb4d604a4a7 199 SUPERFAMILY SSF52499 10 197 2.49E-47 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RPIC12D_RS16430 40ce9938713d5363c7f61fb4d604a4a7 199 PANTHER PTHR11080:SF37 11 197 2.6E-59 T 22-04-2016 RPIC12D_RS16430 40ce9938713d5363c7f61fb4d604a4a7 199 PANTHER PTHR11080 11 197 2.6E-59 T 22-04-2016 RPIC12D_RS16430 40ce9938713d5363c7f61fb4d604a4a7 199 Gene3D G3DSA:3.40.50.850 9 194 1.1E-50 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RPIC12D_RS16430 40ce9938713d5363c7f61fb4d604a4a7 199 Pfam PF00857 Isochorismatase family 16 190 1.4E-36 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RPIC12D_RS22750 dbe362152dc473c3486c2e7fe38d4b70 279 Gene3D G3DSA:3.40.50.720 204 278 5.6E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS22750 dbe362152dc473c3486c2e7fe38d4b70 279 SUPERFAMILY SSF51735 171 278 2.6E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS22750 dbe362152dc473c3486c2e7fe38d4b70 279 Pfam PF00107 Zinc-binding dehydrogenase 211 277 1.8E-20 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIC12D_RS22750 dbe362152dc473c3486c2e7fe38d4b70 279 SMART SM00829 70 276 1.7E-14 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIC12D_RS22750 dbe362152dc473c3486c2e7fe38d4b70 279 SUPERFAMILY SSF50129 61 200 1.83E-39 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS22750 dbe362152dc473c3486c2e7fe38d4b70 279 PANTHER PTHR11695 75 278 1.2E-87 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RPIC12D_RS22750 dbe362152dc473c3486c2e7fe38d4b70 279 Gene3D G3DSA:3.90.180.10 60 203 1.5E-46 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS22750 dbe362152dc473c3486c2e7fe38d4b70 279 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 88 147 2.2E-13 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIC12D_RS22750 dbe362152dc473c3486c2e7fe38d4b70 279 PANTHER PTHR11695:SF31 75 278 1.2E-87 T 22-04-2016 RPIC12D_RS05400 d4beb08ac08872fa0989d4cb682093b8 359 SUPERFAMILY SSF51905 5 320 3.02E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS05400 d4beb08ac08872fa0989d4cb682093b8 359 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 2.5E-15 T 22-04-2016 RPIC12D_RS05400 d4beb08ac08872fa0989d4cb682093b8 359 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 21 40 2.5E-15 T 22-04-2016 RPIC12D_RS05400 d4beb08ac08872fa0989d4cb682093b8 359 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 2.5E-15 T 22-04-2016 RPIC12D_RS05400 d4beb08ac08872fa0989d4cb682093b8 359 PANTHER PTHR22912:SF158 5 337 4.5E-86 T 22-04-2016 RPIC12D_RS05400 d4beb08ac08872fa0989d4cb682093b8 359 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 77 87 4.9E-15 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC12D_RS05400 d4beb08ac08872fa0989d4cb682093b8 359 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 136 4.9E-15 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC12D_RS05400 d4beb08ac08872fa0989d4cb682093b8 359 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 20 42 4.9E-15 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC12D_RS05400 d4beb08ac08872fa0989d4cb682093b8 359 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 167 191 4.9E-15 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC12D_RS05400 d4beb08ac08872fa0989d4cb682093b8 359 Hamap MF_01685 Ferredoxin--NADP reductase. 18 347 39.138 T 22-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 RPIC12D_RS05400 d4beb08ac08872fa0989d4cb682093b8 359 PANTHER PTHR22912 5 337 4.5E-86 T 22-04-2016 RPIC12D_RS05400 d4beb08ac08872fa0989d4cb682093b8 359 Gene3D G3DSA:3.50.50.60 17 142 2.0E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS05400 d4beb08ac08872fa0989d4cb682093b8 359 Gene3D G3DSA:3.50.50.60 265 338 2.0E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS05400 d4beb08ac08872fa0989d4cb682093b8 359 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 20 310 3.1E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS05400 d4beb08ac08872fa0989d4cb682093b8 359 Gene3D G3DSA:3.50.50.60 147 261 5.5E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 Gene3D G3DSA:3.40.50.740 273 412 1.3E-51 T 22-04-2016 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 Gene3D G3DSA:3.40.50.740 519 651 1.3E-51 T 22-04-2016 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 Gene3D G3DSA:2.40.40.20 715 757 1.6E-4 T 22-04-2016 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 PANTHER PTHR11615:SF115 3 513 1.1E-160 T 22-04-2016 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 PANTHER PTHR11615:SF115 772 781 1.1E-160 T 22-04-2016 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 PANTHER PTHR11615:SF115 534 546 1.1E-160 T 22-04-2016 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 PANTHER PTHR11615:SF115 576 660 1.1E-160 T 22-04-2016 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 Pfam PF00384 Molybdopterin oxidoreductase 273 436 1.2E-15 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 Pfam PF00384 Molybdopterin oxidoreductase 529 627 1.4E-14 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 SUPERFAMILY SSF54292 1 74 7.36E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 627 3.7E-218 T 22-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 76 1.7E-18 T 22-04-2016 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 SUPERFAMILY SSF53706 214 651 1.05E-89 T 22-04-2016 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 SUPERFAMILY SSF50692 709 776 3.16E-5 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 122 3.8E-17 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 Gene3D G3DSA:3.10.20.30 2 60 1.1E-7 T 22-04-2016 IPR012675 Beta-grasp domain RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 SUPERFAMILY SSF54862 75 211 1.51E-36 T 22-04-2016 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 PANTHER PTHR11615 3 513 1.1E-160 T 22-04-2016 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 PANTHER PTHR11615 772 781 1.1E-160 T 22-04-2016 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 PANTHER PTHR11615 534 546 1.1E-160 T 22-04-2016 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 PANTHER PTHR11615 576 660 1.1E-160 T 22-04-2016 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 SMART SM00929 83 123 2.2E-21 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RPIC12D_RS09490 b43eac11eaa98a568ec10fdcdeadfe61 783 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 146 156 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RPIC12D_RS07145 4fc287352f0e1270d4d924ed7b1fae79 369 Pfam PF13378 Enolase C-terminal domain-like 148 361 1.5E-45 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC12D_RS07145 4fc287352f0e1270d4d924ed7b1fae79 369 PANTHER PTHR13794 1 368 1.5E-113 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 RPIC12D_RS07145 4fc287352f0e1270d4d924ed7b1fae79 369 SUPERFAMILY SSF51604 113 368 3.41E-65 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC12D_RS07145 4fc287352f0e1270d4d924ed7b1fae79 369 SUPERFAMILY SSF54826 2 126 1.22E-35 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIC12D_RS07145 4fc287352f0e1270d4d924ed7b1fae79 369 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 100 125 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 RPIC12D_RS07145 4fc287352f0e1270d4d924ed7b1fae79 369 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 191 222 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 RPIC12D_RS07145 4fc287352f0e1270d4d924ed7b1fae79 369 PANTHER PTHR13794:SF55 1 368 1.5E-113 T 22-04-2016 RPIC12D_RS07145 4fc287352f0e1270d4d924ed7b1fae79 369 Gene3D G3DSA:3.20.20.120 124 357 3.4E-65 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC12D_RS07145 4fc287352f0e1270d4d924ed7b1fae79 369 Gene3D G3DSA:3.30.390.10 1 123 1.1E-47 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIC12D_RS07145 4fc287352f0e1270d4d924ed7b1fae79 369 SMART SM00922 144 241 6.8E-19 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RPIC12D_RS07145 4fc287352f0e1270d4d924ed7b1fae79 369 TIGRFAM TIGR02534 mucon_cyclo: muconate and chloromuconate cycloisomerases 2 369 7.6E-180 T 22-04-2016 IPR013370 Muconate/chloromuconate cycloisomerase GO:0018849|GO:0018850|GO:0030145 RPIC12D_RS07145 4fc287352f0e1270d4d924ed7b1fae79 369 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 5 125 9.7E-35 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RPIC12D_RS25500 17ab66c276aad46acb35b5c4b90010e1 68 SUPERFAMILY SSF52833 9 68 3.8E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS25500 17ab66c276aad46acb35b5c4b90010e1 68 Gene3D G3DSA:3.40.30.10 12 67 3.1E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS25500 17ab66c276aad46acb35b5c4b90010e1 68 PANTHER PTHR11260 10 68 1.2E-23 T 22-04-2016 RPIC12D_RS25500 17ab66c276aad46acb35b5c4b90010e1 68 PANTHER PTHR11260:SF325 10 68 1.2E-23 T 22-04-2016 RPIC12D_RS25500 17ab66c276aad46acb35b5c4b90010e1 68 Pfam PF13417 Glutathione S-transferase, N-terminal domain 14 68 3.7E-14 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC12D_RS01420 90dc6d121c680faa323e25f92d1c678a 297 PANTHER PTHR30448 1 106 1.6E-115 T 22-04-2016 RPIC12D_RS01420 90dc6d121c680faa323e25f92d1c678a 297 PANTHER PTHR30448 125 296 1.6E-115 T 22-04-2016 RPIC12D_RS01420 90dc6d121c680faa323e25f92d1c678a 297 PIRSF PIRSF005052 1 296 1.8E-113 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 RPIC12D_RS01420 90dc6d121c680faa323e25f92d1c678a 297 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 295 39.485 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 RPIC12D_RS01420 90dc6d121c680faa323e25f92d1c678a 297 Gene3D G3DSA:3.40.50.300 1 168 3.7E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01420 90dc6d121c680faa323e25f92d1c678a 297 Pfam PF03668 P-loop ATPase protein family 1 293 2.1E-92 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 RPIC12D_RS01420 90dc6d121c680faa323e25f92d1c678a 297 SUPERFAMILY SSF52540 1 169 6.65E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01420 90dc6d121c680faa323e25f92d1c678a 297 PANTHER PTHR30448:SF0 1 106 1.6E-115 T 22-04-2016 RPIC12D_RS01420 90dc6d121c680faa323e25f92d1c678a 297 PANTHER PTHR30448:SF0 125 296 1.6E-115 T 22-04-2016 RPIC12D_RS16820 355240c156f2a323f2deec77420e7384 327 Pfam PF02911 Formyl transferase, C-terminal domain 217 315 8.3E-24 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS16820 355240c156f2a323f2deec77420e7384 327 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 145 168 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS16820 355240c156f2a323f2deec77420e7384 327 PANTHER PTHR11138 5 323 6.5E-108 T 22-04-2016 RPIC12D_RS16820 355240c156f2a323f2deec77420e7384 327 SUPERFAMILY SSF50486 218 323 2.94E-29 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RPIC12D_RS16820 355240c156f2a323f2deec77420e7384 327 Gene3D G3DSA:3.40.50.170 5 218 7.9E-76 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS16820 355240c156f2a323f2deec77420e7384 327 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 318 35.366 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS16820 355240c156f2a323f2deec77420e7384 327 SUPERFAMILY SSF53328 5 217 1.11E-61 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS16820 355240c156f2a323f2deec77420e7384 327 Pfam PF00551 Formyl transferase 6 193 1.7E-43 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS16820 355240c156f2a323f2deec77420e7384 327 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 321 6.6E-87 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS16820 355240c156f2a323f2deec77420e7384 327 Gene3D G3DSA:3.10.25.10 220 323 3.9E-31 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS00765 8b05a128bf07bb8471a293eb8440aad0 905 Gene3D G3DSA:3.10.196.10 635 905 1.8E-96 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RPIC12D_RS00765 8b05a128bf07bb8471a293eb8440aad0 905 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 615 890 2.5E-117 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RPIC12D_RS00765 8b05a128bf07bb8471a293eb8440aad0 905 PIRSF PIRSF000381 1 878 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RPIC12D_RS00765 8b05a128bf07bb8471a293eb8440aad0 905 Gene3D G3DSA:1.10.1240.10 313 404 5.0E-37 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RPIC12D_RS00765 8b05a128bf07bb8471a293eb8440aad0 905 Pfam PF02607 B12 binding domain 322 399 1.5E-25 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RPIC12D_RS00765 8b05a128bf07bb8471a293eb8440aad0 905 TIGRFAM TIGR02082 metH: methionine synthase 4 874 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RPIC12D_RS00765 8b05a128bf07bb8471a293eb8440aad0 905 Gene3D G3DSA:3.40.50.280 419 573 3.8E-63 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RPIC12D_RS00765 8b05a128bf07bb8471a293eb8440aad0 905 Pfam PF00809 Pterin binding enzyme 26 264 1.2E-61 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RPIC12D_RS00765 8b05a128bf07bb8471a293eb8440aad0 905 Gene3D G3DSA:3.20.20.20 30 302 1.1E-117 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RPIC12D_RS00765 8b05a128bf07bb8471a293eb8440aad0 905 SUPERFAMILY SSF47644 315 406 2.75E-27 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RPIC12D_RS00765 8b05a128bf07bb8471a293eb8440aad0 905 Pfam PF02310 B12 binding domain 422 515 1.4E-16 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RPIC12D_RS00765 8b05a128bf07bb8471a293eb8440aad0 905 SUPERFAMILY SSF52242 416 572 1.83E-42 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RPIC12D_RS00765 8b05a128bf07bb8471a293eb8440aad0 905 SUPERFAMILY SSF51717 22 296 1.83E-91 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 RPIC12D_RS00765 8b05a128bf07bb8471a293eb8440aad0 905 Gene3D G3DSA:3.20.20.330 4 29 6.5E-4 T 22-04-2016 IPR003726 Homocysteine-binding domain RPIC12D_RS00765 8b05a128bf07bb8471a293eb8440aad0 905 SMART SM01018 320 407 6.7E-43 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RPIC12D_RS00765 8b05a128bf07bb8471a293eb8440aad0 905 SUPERFAMILY SSF56507 579 905 2.75E-121 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RPIC12D_RS15410 2a187853f3fcf028d770b713a98b11aa 232 SUPERFAMILY SSF52172 8 137 1.71E-22 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS15410 2a187853f3fcf028d770b713a98b11aa 232 SMART SM00448 9 126 4.6E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS15410 2a187853f3fcf028d770b713a98b11aa 232 PANTHER PTHR26402:SF151 9 222 7.9E-42 T 22-04-2016 RPIC12D_RS15410 2a187853f3fcf028d770b713a98b11aa 232 SMART SM00421 169 226 2.0E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS15410 2a187853f3fcf028d770b713a98b11aa 232 ProSitePatterns PS00622 LuxR-type HTH domain signature. 186 213 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS15410 2a187853f3fcf028d770b713a98b11aa 232 PANTHER PTHR26402 9 222 7.9E-42 T 22-04-2016 RPIC12D_RS15410 2a187853f3fcf028d770b713a98b11aa 232 Gene3D G3DSA:1.10.10.10 131 226 1.1E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS15410 2a187853f3fcf028d770b713a98b11aa 232 SUPERFAMILY SSF46894 169 227 5.1E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS15410 2a187853f3fcf028d770b713a98b11aa 232 Pfam PF00072 Response regulator receiver domain 11 127 1.8E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS15410 2a187853f3fcf028d770b713a98b11aa 232 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 202 214 4.8E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS15410 2a187853f3fcf028d770b713a98b11aa 232 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 202 4.8E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS15410 2a187853f3fcf028d770b713a98b11aa 232 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 186 4.8E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS15410 2a187853f3fcf028d770b713a98b11aa 232 Gene3D G3DSA:3.40.50.2300 7 130 3.5E-27 T 22-04-2016 RPIC12D_RS15410 2a187853f3fcf028d770b713a98b11aa 232 Pfam PF00196 Bacterial regulatory proteins, luxR family 171 223 2.2E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS11175 de67a2f4480c9356e65f89133bfb85d8 133 PANTHER PTHR37950 2 131 3.0E-32 T 22-04-2016 RPIC12D_RS11175 de67a2f4480c9356e65f89133bfb85d8 133 SUPERFAMILY SSF55331 2 126 7.78E-35 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily RPIC12D_RS11175 de67a2f4480c9356e65f89133bfb85d8 133 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 126 1.4E-30 T 22-04-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10|UniPathway: UPA00208 RPIC12D_RS11175 de67a2f4480c9356e65f89133bfb85d8 133 PANTHER PTHR37950:SF1 2 131 3.0E-32 T 22-04-2016 RPIC12D_RS11175 de67a2f4480c9356e65f89133bfb85d8 133 Gene3D G3DSA:3.30.429.10 2 126 2.2E-42 T 22-04-2016 RPIC12D_RS01990 cc440bde7e4c011bf45cf7b7f16f6a72 462 SUPERFAMILY SSF55920 187 460 8.11E-82 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC12D_RS01990 cc440bde7e4c011bf45cf7b7f16f6a72 462 Pfam PF05195 Aminopeptidase P, N-terminal domain 12 134 7.3E-34 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 RPIC12D_RS01990 cc440bde7e4c011bf45cf7b7f16f6a72 462 Gene3D G3DSA:3.90.230.10 191 453 4.8E-81 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC12D_RS01990 cc440bde7e4c011bf45cf7b7f16f6a72 462 PANTHER PTHR10804:SF17 12 459 1.7E-139 T 22-04-2016 RPIC12D_RS01990 cc440bde7e4c011bf45cf7b7f16f6a72 462 SMART SM01011 7 148 1.1E-58 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 RPIC12D_RS01990 cc440bde7e4c011bf45cf7b7f16f6a72 462 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 364 376 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RPIC12D_RS01990 cc440bde7e4c011bf45cf7b7f16f6a72 462 PANTHER PTHR10804 12 459 1.7E-139 T 22-04-2016 RPIC12D_RS01990 cc440bde7e4c011bf45cf7b7f16f6a72 462 Gene3D G3DSA:3.40.350.10 10 190 2.6E-47 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RPIC12D_RS01990 cc440bde7e4c011bf45cf7b7f16f6a72 462 Pfam PF00557 Metallopeptidase family M24 193 437 4.2E-63 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC12D_RS01990 cc440bde7e4c011bf45cf7b7f16f6a72 462 SUPERFAMILY SSF53092 10 186 5.23E-48 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal RPIC12D_RS03650 1340eb11ea57e0140e1e0abf5cdc5bff 224 PANTHER PTHR11587 2 224 1.1E-104 T 22-04-2016 RPIC12D_RS03650 1340eb11ea57e0140e1e0abf5cdc5bff 224 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 221 55.128 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RPIC12D_RS03650 1340eb11ea57e0140e1e0abf5cdc5bff 224 PANTHER PTHR11587:SF3 2 224 1.1E-104 T 22-04-2016 RPIC12D_RS03650 1340eb11ea57e0140e1e0abf5cdc5bff 224 Gene3D G3DSA:3.40.50.620 2 223 1.2E-77 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS03650 1340eb11ea57e0140e1e0abf5cdc5bff 224 SUPERFAMILY SSF52402 2 223 2.65E-65 T 22-04-2016 RPIC12D_RS03650 1340eb11ea57e0140e1e0abf5cdc5bff 224 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 208 8.5E-61 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RPIC12D_RS03650 1340eb11ea57e0140e1e0abf5cdc5bff 224 Pfam PF06508 Queuosine biosynthesis protein QueC 4 215 7.8E-78 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RPIC12D_RS03650 1340eb11ea57e0140e1e0abf5cdc5bff 224 PIRSF PIRSF006293 1 224 3.8E-78 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RPIC12D_RS13790 31be3ddf2df215a385cfd368ccddc752 384 PANTHER PTHR30124:SF0 85 375 8.7E-91 T 22-04-2016 RPIC12D_RS13790 31be3ddf2df215a385cfd368ccddc752 384 Pfam PF06725 3D domain 299 372 4.1E-25 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 RPIC12D_RS13790 31be3ddf2df215a385cfd368ccddc752 384 SUPERFAMILY SSF50685 31 376 1.6E-116 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RPIC12D_RS13790 31be3ddf2df215a385cfd368ccddc752 384 PANTHER PTHR30124 85 375 8.7E-91 T 22-04-2016 RPIC12D_RS13790 31be3ddf2df215a385cfd368ccddc752 384 SMART SM00925 146 278 3.3E-65 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 RPIC12D_RS13790 31be3ddf2df215a385cfd368ccddc752 384 Gene3D G3DSA:2.40.40.10 62 166 3.0E-28 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RPIC12D_RS13790 31be3ddf2df215a385cfd368ccddc752 384 Gene3D G3DSA:2.40.40.10 188 379 2.2E-57 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RPIC12D_RS13790 31be3ddf2df215a385cfd368ccddc752 384 Pfam PF03562 MltA specific insert domain 72 277 6.1E-64 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 SUPERFAMILY SSF57938 141 217 2.88E-22 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 SUPERFAMILY SSF49493 220 270 3.4E-20 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 SUPERFAMILY SSF49493 122 176 3.4E-20 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 PANTHER PTHR24078:SF190 1 354 5.9E-154 T 22-04-2016 RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 Gene3D G3DSA:2.60.260.20 217 261 4.3E-19 T 22-04-2016 RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 Gene3D G3DSA:2.60.260.20 120 148 4.3E-19 T 22-04-2016 RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 Pfam PF00684 DnaJ central domain 154 214 1.2E-15 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 Pfam PF00226 DnaJ domain 5 67 2.3E-28 T 22-04-2016 IPR001623 DnaJ domain RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 Gene3D G3DSA:2.60.260.20 263 340 8.5E-24 T 22-04-2016 RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 356 5.5E-138 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 379 41.934 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 Gene3D G3DSA:1.10.287.110 1 107 2.1E-37 T 22-04-2016 IPR001623 DnaJ domain RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 Pfam PF01556 DnaJ C terminal domain 128 340 4.3E-42 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 SUPERFAMILY SSF49493 265 351 3.66E-23 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 SMART SM00271 4 62 5.5E-33 T 22-04-2016 IPR001623 DnaJ domain RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 PANTHER PTHR24078 1 354 5.9E-154 T 22-04-2016 RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 Gene3D G3DSA:2.10.230.10 149 216 8.9E-25 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 SUPERFAMILY SSF46565 1 109 4.97E-37 T 22-04-2016 IPR001623 DnaJ domain RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 PRINTS PR00625 DnaJ domain signature 7 25 1.4E-33 T 22-04-2016 IPR001623 DnaJ domain RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 PRINTS PR00625 DnaJ domain signature 25 40 1.4E-33 T 22-04-2016 IPR001623 DnaJ domain RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 PRINTS PR00625 DnaJ domain signature 42 62 1.4E-33 T 22-04-2016 IPR001623 DnaJ domain RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 PRINTS PR00625 DnaJ domain signature 62 81 1.4E-33 T 22-04-2016 IPR001623 DnaJ domain RPIC12D_RS12335 239876ffc001e535a1db82530e123c2c 382 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site RPIC12D_RS14350 91f15981ab5b204996ff050cdb784dee 603 SUPERFAMILY SSF161098 317 600 3.46E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS14350 91f15981ab5b204996ff050cdb784dee 603 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 293 2.5E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS14350 91f15981ab5b204996ff050cdb784dee 603 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 399 589 1.3E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS14350 91f15981ab5b204996ff050cdb784dee 603 PANTHER PTHR30193 23 305 1.6E-123 T 22-04-2016 RPIC12D_RS14350 91f15981ab5b204996ff050cdb784dee 603 Gene3D G3DSA:1.10.3720.10 320 600 5.4E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS14350 91f15981ab5b204996ff050cdb784dee 603 Gene3D G3DSA:1.10.3720.10 31 297 2.6E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS14350 91f15981ab5b204996ff050cdb784dee 603 PANTHER PTHR30193:SF14 23 305 1.6E-123 T 22-04-2016 RPIC12D_RS14350 91f15981ab5b204996ff050cdb784dee 603 SUPERFAMILY SSF161098 29 298 4.39E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS05085 0f17170568431b8789ed722debe1561a 402 Pfam PF13609 Gram-negative porin 19 318 1.5E-39 T 22-04-2016 RPIC12D_RS05085 0f17170568431b8789ed722debe1561a 402 PRINTS PR00184 Neisseria sp. porin signature 65 90 7.4E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS05085 0f17170568431b8789ed722debe1561a 402 PRINTS PR00184 Neisseria sp. porin signature 167 184 7.4E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS05085 0f17170568431b8789ed722debe1561a 402 PRINTS PR00184 Neisseria sp. porin signature 251 277 7.4E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS05085 0f17170568431b8789ed722debe1561a 402 SUPERFAMILY SSF56935 26 402 7.33E-79 T 22-04-2016 RPIC12D_RS05085 0f17170568431b8789ed722debe1561a 402 Gene3D G3DSA:2.40.160.10 33 402 1.4E-87 T 22-04-2016 IPR023614 Porin domain RPIC12D_RS00815 ff5074e854eb97fe7a5b9968518b8f77 387 Pfam PF13458 Periplasmic binding protein 26 372 1.0E-50 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC12D_RS00815 ff5074e854eb97fe7a5b9968518b8f77 387 Gene3D G3DSA:3.40.50.2300 25 219 5.2E-40 T 22-04-2016 RPIC12D_RS00815 ff5074e854eb97fe7a5b9968518b8f77 387 PANTHER PTHR30483:SF7 9 383 5.9E-123 T 22-04-2016 RPIC12D_RS00815 ff5074e854eb97fe7a5b9968518b8f77 387 SUPERFAMILY SSF53822 25 382 2.88E-70 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS00815 ff5074e854eb97fe7a5b9968518b8f77 387 PANTHER PTHR30483 9 383 5.9E-123 T 22-04-2016 RPIC12D_RS12475 50a6a032f670d1f74c26994439efe5c5 359 SUPERFAMILY SSF51569 7 351 2.07E-137 T 22-04-2016 RPIC12D_RS12475 50a6a032f670d1f74c26994439efe5c5 359 PIRSF PIRSF001361 1 354 6.4E-161 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC12D_RS12475 50a6a032f670d1f74c26994439efe5c5 359 Gene3D G3DSA:3.20.20.70 9 352 9.4E-157 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS12475 50a6a032f670d1f74c26994439efe5c5 359 Pfam PF00793 DAHP synthetase I family 42 341 2.0E-103 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RPIC12D_RS12475 50a6a032f670d1f74c26994439efe5c5 359 PANTHER PTHR21225 1 352 1.1E-236 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC12D_RS12475 50a6a032f670d1f74c26994439efe5c5 359 PANTHER PTHR21225:SF7 1 352 1.1E-236 T 22-04-2016 RPIC12D_RS12475 50a6a032f670d1f74c26994439efe5c5 359 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 352 1.1E-165 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC12D_RS01530 7d52c687c709756425940e0cc77ab75e 224 PANTHER PTHR30485:SF1 1 222 3.8E-48 T 22-04-2016 RPIC12D_RS01530 7d52c687c709756425940e0cc77ab75e 224 Gene3D G3DSA:1.20.950.20 17 209 4.1E-46 T 22-04-2016 RPIC12D_RS01530 7d52c687c709756425940e0cc77ab75e 224 SUPERFAMILY SSF81342 14 209 1.73E-35 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RPIC12D_RS01530 7d52c687c709756425940e0cc77ab75e 224 PANTHER PTHR30485 1 222 3.8E-48 T 22-04-2016 RPIC12D_RS01530 7d52c687c709756425940e0cc77ab75e 224 Pfam PF01292 Prokaryotic cytochrome b561 18 207 1.6E-26 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RPIC12D_RS09330 ef2635f726984276a3a403a8eb58c3f6 419 Gene3D G3DSA:1.10.540.10 1 135 5.8E-33 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS09330 ef2635f726984276a3a403a8eb58c3f6 419 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 137 234 8.2E-21 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC12D_RS09330 ef2635f726984276a3a403a8eb58c3f6 419 SUPERFAMILY SSF47203 248 403 9.5E-43 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS09330 ef2635f726984276a3a403a8eb58c3f6 419 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 133 1.7E-11 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS09330 ef2635f726984276a3a403a8eb58c3f6 419 SUPERFAMILY SSF56645 1 263 1.57E-63 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC12D_RS09330 ef2635f726984276a3a403a8eb58c3f6 419 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 250 398 3.7E-35 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS09330 ef2635f726984276a3a403a8eb58c3f6 419 Gene3D G3DSA:1.20.140.10 240 404 2.7E-45 T 22-04-2016 RPIC12D_RS09330 ef2635f726984276a3a403a8eb58c3f6 419 PANTHER PTHR10909:SF282 1 417 4.5E-219 T 22-04-2016 RPIC12D_RS09330 ef2635f726984276a3a403a8eb58c3f6 419 Gene3D G3DSA:2.40.110.10 136 239 8.6E-39 T 22-04-2016 RPIC12D_RS09330 ef2635f726984276a3a403a8eb58c3f6 419 PANTHER PTHR10909 1 417 4.5E-219 T 22-04-2016 RPIC12D_RS01205 66e33cee477438893a9b1b56c36751d6 256 Pfam PF02104 SURF1 family 21 232 5.9E-29 T 22-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 RPIC12D_RS01205 66e33cee477438893a9b1b56c36751d6 256 PANTHER PTHR23427 16 245 6.9E-12 T 22-04-2016 RPIC12D_RS01205 66e33cee477438893a9b1b56c36751d6 256 PANTHER PTHR23427:SF2 16 245 6.9E-12 T 22-04-2016 RPIC12D_RS07920 c27769a93f0951f3f245ff501979d080 397 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 15 386 6.8E-121 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 RPIC12D_RS07920 c27769a93f0951f3f245ff501979d080 397 Pfam PF07687 Peptidase dimerisation domain 179 288 1.5E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS07920 c27769a93f0951f3f245ff501979d080 397 Gene3D G3DSA:3.30.70.360 192 288 1.9E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS07920 c27769a93f0951f3f245ff501979d080 397 Gene3D G3DSA:3.40.630.10 332 390 8.0E-64 T 22-04-2016 RPIC12D_RS07920 c27769a93f0951f3f245ff501979d080 397 Gene3D G3DSA:3.40.630.10 10 191 8.0E-64 T 22-04-2016 RPIC12D_RS07920 c27769a93f0951f3f245ff501979d080 397 SUPERFAMILY SSF53187 10 182 1.18E-58 T 22-04-2016 RPIC12D_RS07920 c27769a93f0951f3f245ff501979d080 397 SUPERFAMILY SSF53187 309 390 1.18E-58 T 22-04-2016 RPIC12D_RS07920 c27769a93f0951f3f245ff501979d080 397 PANTHER PTHR11014 11 395 1.0E-144 T 22-04-2016 RPIC12D_RS07920 c27769a93f0951f3f245ff501979d080 397 SUPERFAMILY SSF55031 183 289 2.54E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS07920 c27769a93f0951f3f245ff501979d080 397 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 109 146 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RPIC12D_RS07920 c27769a93f0951f3f245ff501979d080 397 PANTHER PTHR11014:SF80 11 395 1.0E-144 T 22-04-2016 RPIC12D_RS07920 c27769a93f0951f3f245ff501979d080 397 Pfam PF01546 Peptidase family M20/M25/M40 76 387 4.1E-38 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC12D_RS00165 0f94a888a0380e705488dbae510d4cd3 292 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 283 39.457 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS00165 0f94a888a0380e705488dbae510d4cd3 292 PANTHER PTHR31689:SF0 1 287 3.9E-125 T 22-04-2016 RPIC12D_RS00165 0f94a888a0380e705488dbae510d4cd3 292 Gene3D G3DSA:3.10.310.10 121 271 7.0E-50 T 22-04-2016 RPIC12D_RS00165 0f94a888a0380e705488dbae510d4cd3 292 SUPERFAMILY SSF54506 3 283 7.07E-53 T 22-04-2016 RPIC12D_RS00165 0f94a888a0380e705488dbae510d4cd3 292 PANTHER PTHR31689 1 287 3.9E-125 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS00165 0f94a888a0380e705488dbae510d4cd3 292 Pfam PF01678 Diaminopimelate epimerase 5 125 6.5E-34 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS00165 0f94a888a0380e705488dbae510d4cd3 292 Pfam PF01678 Diaminopimelate epimerase 161 275 1.3E-27 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS00165 0f94a888a0380e705488dbae510d4cd3 292 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS00165 0f94a888a0380e705488dbae510d4cd3 292 Gene3D G3DSA:3.10.310.10 1 120 1.4E-55 T 22-04-2016 RPIC12D_RS00165 0f94a888a0380e705488dbae510d4cd3 292 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 281 1.8E-86 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS09905 79e9f4ac71d3c7370e8f01fc4f6de014 194 PANTHER PTHR24423 11 122 6.6E-13 T 22-04-2016 RPIC12D_RS09905 79e9f4ac71d3c7370e8f01fc4f6de014 194 SUPERFAMILY SSF55785 11 99 5.37E-20 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS09905 79e9f4ac71d3c7370e8f01fc4f6de014 194 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 121 1.7E-18 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS09905 79e9f4ac71d3c7370e8f01fc4f6de014 194 Pfam PF00989 PAS fold 12 94 4.4E-15 T 22-04-2016 IPR013767 PAS fold GO:0006355 RPIC12D_RS09905 79e9f4ac71d3c7370e8f01fc4f6de014 194 SMART SM00421 130 187 5.0E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS09905 79e9f4ac71d3c7370e8f01fc4f6de014 194 Gene3D G3DSA:1.10.10.10 127 189 5.6E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS09905 79e9f4ac71d3c7370e8f01fc4f6de014 194 Gene3D G3DSA:3.30.450.20 11 116 2.5E-21 T 22-04-2016 RPIC12D_RS09905 79e9f4ac71d3c7370e8f01fc4f6de014 194 SUPERFAMILY SSF46894 120 188 3.1E-12 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS09905 79e9f4ac71d3c7370e8f01fc4f6de014 194 SMART SM00091 6 73 1.5E-11 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS09905 79e9f4ac71d3c7370e8f01fc4f6de014 194 Pfam PF00196 Bacterial regulatory proteins, luxR family 132 185 5.6E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS13895 d6ed01fe8b9e2b154e41092e816da5d8 363 SUPERFAMILY SSF52540 3 302 5.68E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13895 d6ed01fe8b9e2b154e41092e816da5d8 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 2.1E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS13895 d6ed01fe8b9e2b154e41092e816da5d8 363 Gene3D G3DSA:3.40.50.300 4 130 3.8E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13895 d6ed01fe8b9e2b154e41092e816da5d8 363 Gene3D G3DSA:3.40.50.300 202 267 3.8E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13895 d6ed01fe8b9e2b154e41092e816da5d8 363 Gene3D G3DSA:1.10.150.300 131 201 5.0E-27 T 22-04-2016 IPR023192 TGS-like domain RPIC12D_RS13895 d6ed01fe8b9e2b154e41092e816da5d8 363 PANTHER PTHR23305:SF12 1 362 1.0E-201 T 22-04-2016 RPIC12D_RS13895 d6ed01fe8b9e2b154e41092e816da5d8 363 Gene3D G3DSA:3.10.20.30 268 362 1.1E-46 T 22-04-2016 IPR012675 Beta-grasp domain RPIC12D_RS13895 d6ed01fe8b9e2b154e41092e816da5d8 363 Pfam PF06071 Protein of unknown function (DUF933) 280 362 7.0E-37 T 22-04-2016 IPR013029 Domain of unknown function DUF933 RPIC12D_RS13895 d6ed01fe8b9e2b154e41092e816da5d8 363 PANTHER PTHR23305 1 362 1.0E-201 T 22-04-2016 RPIC12D_RS13895 d6ed01fe8b9e2b154e41092e816da5d8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS13895 d6ed01fe8b9e2b154e41092e816da5d8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS13895 d6ed01fe8b9e2b154e41092e816da5d8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS13895 d6ed01fe8b9e2b154e41092e816da5d8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.3E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS13895 d6ed01fe8b9e2b154e41092e816da5d8 363 SUPERFAMILY SSF81271 280 360 1.94E-34 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RPIC12D_RS13895 d6ed01fe8b9e2b154e41092e816da5d8 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 43.206 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RPIC12D_RS13895 d6ed01fe8b9e2b154e41092e816da5d8 363 PIRSF PIRSF006641 1 363 2.2E-152 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RPIC12D_RS13895 d6ed01fe8b9e2b154e41092e816da5d8 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 362 9.1E-155 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 PANTHER PTHR19375:SF173 2 651 0.0 T 22-04-2016 RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 PRINTS PR00301 70kDa heat shock protein signature 199 209 3.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 PRINTS PR00301 70kDa heat shock protein signature 335 351 3.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 PRINTS PR00301 70kDa heat shock protein signature 470 486 3.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 PRINTS PR00301 70kDa heat shock protein signature 366 386 3.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 PRINTS PR00301 70kDa heat shock protein signature 389 408 3.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 PRINTS PR00301 70kDa heat shock protein signature 138 158 3.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 Pfam PF00012 Hsp70 protein 4 604 1.6E-263 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 Gene3D G3DSA:2.60.34.10 391 533 7.1E-72 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 Gene3D G3DSA:1.20.1270.10 534 604 1.7E-29 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 604 1.0E-290 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 Gene3D G3DSA:3.90.640.10 231 316 2.2E-31 T 22-04-2016 RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 SUPERFAMILY SSF100934 508 605 5.36E-23 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 SUPERFAMILY SSF53067 4 184 2.73E-64 T 22-04-2016 RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 Gene3D G3DSA:3.30.420.40 198 230 1.7E-33 T 22-04-2016 RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 Gene3D G3DSA:3.30.420.40 320 361 1.7E-33 T 22-04-2016 RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 647 36.85 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 Gene3D G3DSA:3.30.30.30 53 107 2.1E-25 T 22-04-2016 RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 PANTHER PTHR19375 2 651 0.0 T 22-04-2016 RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 SUPERFAMILY SSF53067 188 383 2.35E-68 T 22-04-2016 RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 Gene3D G3DSA:3.30.420.40 4 52 1.6E-62 T 22-04-2016 RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 Gene3D G3DSA:3.30.420.40 119 197 1.6E-62 T 22-04-2016 RPIC12D_RS12340 8626a925f8cba6a9b1224ffffb8011e9 651 SUPERFAMILY SSF100920 385 541 2.35E-61 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RPIC12D_RS15980 a871fe4d7b968556dc352c24dd6d9820 291 SUPERFAMILY SSF52943 2 291 5.1E-94 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain RPIC12D_RS15980 a871fe4d7b968556dc352c24dd6d9820 291 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 291 5.9E-104 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC12D_RS15980 a871fe4d7b968556dc352c24dd6d9820 291 Gene3D G3DSA:1.10.287.80 206 239 6.0E-41 T 22-04-2016 RPIC12D_RS15980 a871fe4d7b968556dc352c24dd6d9820 291 Gene3D G3DSA:1.10.287.80 19 60 6.0E-41 T 22-04-2016 RPIC12D_RS15980 a871fe4d7b968556dc352c24dd6d9820 291 Gene3D G3DSA:1.10.287.80 240 286 9.9E-29 T 22-04-2016 RPIC12D_RS15980 a871fe4d7b968556dc352c24dd6d9820 291 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.6E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC12D_RS15980 a871fe4d7b968556dc352c24dd6d9820 291 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.6E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC12D_RS15980 a871fe4d7b968556dc352c24dd6d9820 291 PRINTS PR00126 ATP synthase gamma subunit signature 269 290 1.6E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC12D_RS15980 a871fe4d7b968556dc352c24dd6d9820 291 PRINTS PR00126 ATP synthase gamma subunit signature 238 257 1.6E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC12D_RS15980 a871fe4d7b968556dc352c24dd6d9820 291 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 291 35.904 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC12D_RS15980 a871fe4d7b968556dc352c24dd6d9820 291 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 277 290 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site RPIC12D_RS15980 a871fe4d7b968556dc352c24dd6d9820 291 PANTHER PTHR11693 1 291 4.2E-118 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC12D_RS15980 a871fe4d7b968556dc352c24dd6d9820 291 Gene3D G3DSA:3.40.1380.10 63 191 3.1E-41 T 22-04-2016 RPIC12D_RS15980 a871fe4d7b968556dc352c24dd6d9820 291 Pfam PF00231 ATP synthase 4 290 1.6E-89 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC12D_RS07475 04422d054cc1d03367cde209f9273cb6 507 Pfam PF00324 Amino acid permease 24 480 4.4E-124 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RPIC12D_RS07475 04422d054cc1d03367cde209f9273cb6 507 PIRSF PIRSF006060 4 494 1.7E-83 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC12D_RS07475 04422d054cc1d03367cde209f9273cb6 507 ProSitePatterns PS00218 Amino acid permeases signature. 49 80 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RPIC12D_RS07475 04422d054cc1d03367cde209f9273cb6 507 PANTHER PTHR11785:SF204 11 486 1.8E-190 T 22-04-2016 RPIC12D_RS07475 04422d054cc1d03367cde209f9273cb6 507 PANTHER PTHR11785 11 486 1.8E-190 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC12D_RS15460 048920096a79159e3e45cbe8180ac75d 540 Gene3D G3DSA:1.10.560.10 370 518 1.7E-43 T 22-04-2016 IPR027413 GroEL-like equatorial domain RPIC12D_RS15460 048920096a79159e3e45cbe8180ac75d 540 SUPERFAMILY SSF52029 184 376 1.52E-80 T 22-04-2016 IPR027409 GroEL-like apical domain RPIC12D_RS15460 048920096a79159e3e45cbe8180ac75d 540 PRINTS PR00298 60kDa chaperonin signature 398 419 3.3E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC12D_RS15460 048920096a79159e3e45cbe8180ac75d 540 PRINTS PR00298 60kDa chaperonin signature 83 110 3.3E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC12D_RS15460 048920096a79159e3e45cbe8180ac75d 540 PRINTS PR00298 60kDa chaperonin signature 350 375 3.3E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC12D_RS15460 048920096a79159e3e45cbe8180ac75d 540 PRINTS PR00298 60kDa chaperonin signature 27 53 3.3E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC12D_RS15460 048920096a79159e3e45cbe8180ac75d 540 PRINTS PR00298 60kDa chaperonin signature 268 291 3.3E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC12D_RS15460 048920096a79159e3e45cbe8180ac75d 540 Gene3D G3DSA:1.10.560.10 3 196 2.6E-49 T 22-04-2016 IPR027413 GroEL-like equatorial domain RPIC12D_RS15460 048920096a79159e3e45cbe8180ac75d 540 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 3.3E-254 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC12D_RS15460 048920096a79159e3e45cbe8180ac75d 540 SUPERFAMILY SSF48592 406 521 1.45E-78 T 22-04-2016 RPIC12D_RS15460 048920096a79159e3e45cbe8180ac75d 540 SUPERFAMILY SSF48592 7 134 1.45E-78 T 22-04-2016 RPIC12D_RS15460 048920096a79159e3e45cbe8180ac75d 540 Gene3D G3DSA:3.50.7.10 197 369 4.7E-91 T 22-04-2016 IPR027409 GroEL-like apical domain RPIC12D_RS15460 048920096a79159e3e45cbe8180ac75d 540 PANTHER PTHR11353 3 536 4.3E-251 T 22-04-2016 RPIC12D_RS15460 048920096a79159e3e45cbe8180ac75d 540 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 RPIC12D_RS15460 048920096a79159e3e45cbe8180ac75d 540 Hamap MF_00600 60 kDa chaperonin [groL]. 2 538 40.916 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC12D_RS15460 048920096a79159e3e45cbe8180ac75d 540 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 8.4E-100 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 RPIC12D_RS15460 048920096a79159e3e45cbe8180ac75d 540 SUPERFAMILY SSF54849 137 204 9.39E-26 T 22-04-2016 RPIC12D_RS01975 d02f15bcd9bbe07b4441d77680ec8335 355 Gene3D G3DSA:3.20.20.70 7 246 5.8E-83 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS01975 d02f15bcd9bbe07b4441d77680ec8335 355 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 7.6E-124 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 RPIC12D_RS01975 d02f15bcd9bbe07b4441d77680ec8335 355 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC12D_RS01975 d02f15bcd9bbe07b4441d77680ec8335 355 SUPERFAMILY SSF51395 10 321 2.49E-87 T 22-04-2016 RPIC12D_RS01975 d02f15bcd9bbe07b4441d77680ec8335 355 Pfam PF01207 Dihydrouridine synthase (Dus) 14 321 3.7E-106 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC12D_RS01975 d02f15bcd9bbe07b4441d77680ec8335 355 PIRSF PIRSF006621 1 329 1.2E-106 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC12D_RS01975 d02f15bcd9bbe07b4441d77680ec8335 355 Gene3D G3DSA:1.10.1200.80 254 328 2.4E-25 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 RPIC12D_RS01975 d02f15bcd9bbe07b4441d77680ec8335 355 PANTHER PTHR11082 1 328 4.8E-136 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC12D_RS01975 d02f15bcd9bbe07b4441d77680ec8335 355 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 323 50.524 T 22-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 RPIC12D_RS01975 d02f15bcd9bbe07b4441d77680ec8335 355 PANTHER PTHR11082:SF25 1 328 4.8E-136 T 22-04-2016 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 8 95 4.1E-23 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 13 596 2.9E-123 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 134 143 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 Hamap MF_00123 Arginine--tRNA ligase [argS]. 7 596 25.302 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 SUPERFAMILY SSF52374 120 406 5.07E-80 T 22-04-2016 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 SUPERFAMILY SSF52374 437 485 5.07E-80 T 22-04-2016 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 SMART SM00836 475 596 7.2E-51 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 SMART SM01016 7 95 1.0E-36 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 Gene3D G3DSA:3.30.1360.70 4 114 1.6E-30 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 Gene3D G3DSA:3.40.50.620 118 478 2.4E-106 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 SUPERFAMILY SSF55190 4 115 4.97E-24 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 Gene3D G3DSA:1.10.730.10 479 596 1.1E-43 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 SUPERFAMILY SSF47323 470 596 6.47E-35 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 PANTHER PTHR11956:SF6 1 596 6.7E-212 T 22-04-2016 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 2.9E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 2.9E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 312 333 2.9E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 2.9E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 Pfam PF05746 DALR anticodon binding domain 475 596 4.6E-36 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 Pfam PF00750 tRNA synthetases class I (R) 105 414 1.5E-19 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS00715 6113bc46dde1a7221d53b50e281ee106 596 PANTHER PTHR11956 1 596 6.7E-212 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS00630 1489b0823d40a228574afdf003904110 535 PANTHER PTHR22855 1 535 0.0 T 22-04-2016 RPIC12D_RS00630 1489b0823d40a228574afdf003904110 535 Pfam PF01039 Carboxyl transferase domain 48 524 4.7E-151 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS00630 1489b0823d40a228574afdf003904110 535 SUPERFAMILY SSF52096 237 517 1.22E-88 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS00630 1489b0823d40a228574afdf003904110 535 PANTHER PTHR22855:SF35 1 535 0.0 T 22-04-2016 RPIC12D_RS00630 1489b0823d40a228574afdf003904110 535 Gene3D G3DSA:3.90.226.10 29 273 9.8E-82 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS00630 1489b0823d40a228574afdf003904110 535 Gene3D G3DSA:3.90.226.10 274 528 5.8E-94 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS00630 1489b0823d40a228574afdf003904110 535 SUPERFAMILY SSF52096 22 271 8.3E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS16720 aded22aeda8d99fc364f12c62561e7e1 276 SUPERFAMILY SSF51730 4 275 2.55E-99 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like RPIC12D_RS16720 aded22aeda8d99fc364f12c62561e7e1 276 PANTHER PTHR21091:SF31 133 276 2.5E-41 T 22-04-2016 RPIC12D_RS16720 aded22aeda8d99fc364f12c62561e7e1 276 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 6 274 1.2E-102 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 RPIC12D_RS16720 aded22aeda8d99fc364f12c62561e7e1 276 Gene3D G3DSA:3.20.20.220 3 276 3.2E-110 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like RPIC12D_RS16720 aded22aeda8d99fc364f12c62561e7e1 276 PANTHER PTHR21091 133 276 2.5E-41 T 22-04-2016 RPIC12D_RS16720 aded22aeda8d99fc364f12c62561e7e1 276 Pfam PF02219 Methylenetetrahydrofolate reductase 4 275 6.2E-91 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 RPIC12D_RS12035 5e05e819473c4ef347dcfb67a50d26af 268 Gene3D G3DSA:3.90.550.10 6 260 2.0E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS12035 5e05e819473c4ef347dcfb67a50d26af 268 PANTHER PTHR21485 6 261 1.6E-97 T 22-04-2016 RPIC12D_RS12035 5e05e819473c4ef347dcfb67a50d26af 268 SUPERFAMILY SSF53448 6 264 6.61E-59 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS12035 5e05e819473c4ef347dcfb67a50d26af 268 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 6 252 3.2E-87 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RPIC12D_RS12035 5e05e819473c4ef347dcfb67a50d26af 268 Pfam PF02348 Cytidylyltransferase 7 233 3.3E-53 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RPIC12D_RS12035 5e05e819473c4ef347dcfb67a50d26af 268 PANTHER PTHR21485:SF4 6 261 1.6E-97 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RPIC12D_RS12035 5e05e819473c4ef347dcfb67a50d26af 268 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 4 260 40.906 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RPIC12D_RS13785 44bf8a51e71ff8349fd14b596b7e2f4f 434 PANTHER PTHR24095 62 353 4.9E-180 T 22-04-2016 RPIC12D_RS13785 44bf8a51e71ff8349fd14b596b7e2f4f 434 PIRSF PIRSF006444 3 434 4.9E-201 T 22-04-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716|UniPathway: UPA00930 RPIC12D_RS13785 44bf8a51e71ff8349fd14b596b7e2f4f 434 Gene3D G3DSA:3.40.50.980 88 253 6.1E-13 T 22-04-2016 RPIC12D_RS13785 44bf8a51e71ff8349fd14b596b7e2f4f 434 Gene3D G3DSA:3.30.300.30 329 433 3.8E-32 T 22-04-2016 RPIC12D_RS13785 44bf8a51e71ff8349fd14b596b7e2f4f 434 PANTHER PTHR24095:SF175 62 353 4.9E-180 T 22-04-2016 RPIC12D_RS13785 44bf8a51e71ff8349fd14b596b7e2f4f 434 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 14 432 1.3E-208 T 22-04-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716|UniPathway: UPA00930 RPIC12D_RS13785 44bf8a51e71ff8349fd14b596b7e2f4f 434 Pfam PF00501 AMP-binding enzyme 83 292 1.0E-16 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC12D_RS13785 44bf8a51e71ff8349fd14b596b7e2f4f 434 Pfam PF14535 AMP-binding enzyme C-terminal domain 339 432 1.0E-22 T 22-04-2016 IPR028154 AMP-dependent ligase, C-terminal RPIC12D_RS13785 44bf8a51e71ff8349fd14b596b7e2f4f 434 SUPERFAMILY SSF56801 24 389 2.75E-63 T 22-04-2016 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 PANTHER PTHR22931 70 562 1.7E-153 T 22-04-2016 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 Gene3D G3DSA:3.20.20.60 265 577 7.2E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 SUPERFAMILY SSF47831 28 146 9.55E-30 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 Gene3D G3DSA:3.50.30.10 136 264 1.2E-41 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 474 1.4E-23 T 22-04-2016 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 476 491 1.4E-23 T 22-04-2016 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 302 321 1.4E-23 T 22-04-2016 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 512 524 1.4E-23 T 22-04-2016 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 SUPERFAMILY SSF52009 128 253 3.01E-31 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 Pfam PF00391 PEP-utilising enzyme, mobile domain 162 234 1.7E-22 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 PANTHER PTHR22931:SF28 70 562 1.7E-153 T 22-04-2016 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 SUPERFAMILY SSF51621 258 554 2.88E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 2.9E-28 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 PIRSF PIRSF000732 1 583 4.0E-208 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 Gene3D G3DSA:1.10.274.10 27 135 6.8E-34 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 193 204 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 459 477 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 567 3.1E-161 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 RPIC12D_RS01105 13a9be52c2a80650a867bd4d8f5499f4 583 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 260 552 1.1E-108 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RPIC12D_RS01285 f47ec9d34c49c1c8d77b5befd1281ba1 212 PIRSF PIRSF036382 13 212 8.8E-61 T 22-04-2016 IPR008327 Signal transduction response regulator, antiterminator RPIC12D_RS01285 f47ec9d34c49c1c8d77b5befd1281ba1 212 SUPERFAMILY SSF52172 18 207 7.24E-42 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS01285 f47ec9d34c49c1c8d77b5befd1281ba1 212 PANTHER PTHR26402 21 206 1.9E-33 T 22-04-2016 RPIC12D_RS01285 f47ec9d34c49c1c8d77b5befd1281ba1 212 SMART SM01012 152 207 3.9E-24 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 RPIC12D_RS01285 f47ec9d34c49c1c8d77b5befd1281ba1 212 Pfam PF03861 ANTAR domain 156 207 1.1E-19 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 RPIC12D_RS01285 f47ec9d34c49c1c8d77b5befd1281ba1 212 PANTHER PTHR26402:SF567 21 206 1.9E-33 T 22-04-2016 RPIC12D_RS01285 f47ec9d34c49c1c8d77b5befd1281ba1 212 Gene3D G3DSA:1.10.10.10 156 210 3.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS01285 f47ec9d34c49c1c8d77b5befd1281ba1 212 Gene3D G3DSA:3.40.50.2300 12 148 1.3E-12 T 22-04-2016 RPIC12D_RS04065 51c085ea03c3e695332e9d6b09f6a6bb 371 PIRSF PIRSF013171 6 371 2.4E-168 T 22-04-2016 IPR009486 Purine nucleoside permease GO:0055085 RPIC12D_RS04065 51c085ea03c3e695332e9d6b09f6a6bb 371 Pfam PF06516 Purine nucleoside permease (NUP) 59 369 4.4E-129 T 22-04-2016 IPR009486 Purine nucleoside permease GO:0055085 RPIC12D_RS04065 51c085ea03c3e695332e9d6b09f6a6bb 371 Gene3D G3DSA:3.40.50.1580 58 144 6.0E-7 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RPIC12D_RS04065 51c085ea03c3e695332e9d6b09f6a6bb 371 PANTHER PTHR38643 61 364 7.9E-96 T 22-04-2016 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 Pfam PF00873 AcrB/AcrD/AcrF family 10 1022 7.7E-170 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 SUPERFAMILY SSF82714 723 806 3.01E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 PANTHER PTHR32063 5 1033 0.0 T 22-04-2016 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 SUPERFAMILY SSF82693 45 140 2.27E-18 T 22-04-2016 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 Gene3D G3DSA:3.30.2090.10 723 805 7.3E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 Gene3D G3DSA:3.30.2090.10 190 272 2.5E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 SUPERFAMILY SSF82693 141 187 1.44E-20 T 22-04-2016 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 SUPERFAMILY SSF82693 275 330 1.44E-20 T 22-04-2016 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 Gene3D G3DSA:3.30.70.1430 45 144 1.9E-20 T 22-04-2016 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 Gene3D G3DSA:1.10.3850.10 281 507 4.7E-41 T 22-04-2016 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 Gene3D G3DSA:1.10.3850.10 813 1026 5.5E-49 T 22-04-2016 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 PANTHER PTHR32063:SF18 5 1033 0.0 T 22-04-2016 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 SUPERFAMILY SSF82866 806 1029 6.8E-45 T 22-04-2016 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 SUPERFAMILY SSF82693 573 673 3.45E-6 T 22-04-2016 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 SUPERFAMILY SSF82866 299 507 2.75E-33 T 22-04-2016 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 Gene3D G3DSA:3.30.70.1430 574 667 1.7E-5 T 22-04-2016 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 1.9E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 PRINTS PR00702 Acriflavin resistance protein family signature 401 425 1.9E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 1.9E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 PRINTS PR00702 Acriflavin resistance protein family signature 373 394 1.9E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 1.9E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS07855 265a73755292728667952f6e9244d642 1039 SUPERFAMILY SSF82714 190 271 3.66E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC12D_RS13740 ca6e188fc8d0602564272235d1b16ea6 396 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 380 1.3E-113 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RPIC12D_RS13740 ca6e188fc8d0602564272235d1b16ea6 396 Pfam PF07687 Peptidase dimerisation domain 184 281 1.2E-9 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS13740 ca6e188fc8d0602564272235d1b16ea6 396 Pfam PF01546 Peptidase family M20/M25/M40 72 390 2.2E-37 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC12D_RS13740 ca6e188fc8d0602564272235d1b16ea6 396 Gene3D G3DSA:3.40.630.10 297 394 2.2E-106 T 22-04-2016 RPIC12D_RS13740 ca6e188fc8d0602564272235d1b16ea6 396 Gene3D G3DSA:3.40.630.10 3 177 2.2E-106 T 22-04-2016 RPIC12D_RS13740 ca6e188fc8d0602564272235d1b16ea6 396 SUPERFAMILY SSF53187 2 196 1.16E-94 T 22-04-2016 RPIC12D_RS13740 ca6e188fc8d0602564272235d1b16ea6 396 SUPERFAMILY SSF53187 297 394 1.16E-94 T 22-04-2016 RPIC12D_RS13740 ca6e188fc8d0602564272235d1b16ea6 396 PIRSF PIRSF005962 1 396 6.7E-134 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RPIC12D_RS13740 ca6e188fc8d0602564272235d1b16ea6 396 PANTHER PTHR11014 1 396 8.4E-161 T 22-04-2016 RPIC12D_RS13740 ca6e188fc8d0602564272235d1b16ea6 396 PANTHER PTHR11014:SF63 1 396 8.4E-161 T 22-04-2016 RPIC12D_RS13740 ca6e188fc8d0602564272235d1b16ea6 396 Gene3D G3DSA:3.30.70.360 180 296 5.0E-43 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS13740 ca6e188fc8d0602564272235d1b16ea6 396 SUPERFAMILY SSF55031 182 295 4.19E-32 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS03620 3ca164f157bba428004518b17c6e710c 230 PANTHER PTHR30625:SF3 8 228 3.7E-68 T 22-04-2016 RPIC12D_RS03620 3ca164f157bba428004518b17c6e710c 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 84 215 6.2E-43 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RPIC12D_RS03620 3ca164f157bba428004518b17c6e710c 230 PANTHER PTHR30625 8 228 3.7E-68 T 22-04-2016 RPIC12D_RS03620 3ca164f157bba428004518b17c6e710c 230 TIGRFAM TIGR02796 tolQ: protein TolQ 11 227 2.4E-88 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 RPIC12D_RS23295 48691fe400b06f0c2729b494cf62f333 75 PANTHER PTHR10169 1 75 6.4E-21 T 22-04-2016 RPIC12D_RS23295 48691fe400b06f0c2729b494cf62f333 75 Pfam PF00204 DNA gyrase B 2 75 3.3E-26 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS23295 48691fe400b06f0c2729b494cf62f333 75 SUPERFAMILY SSF54211 1 75 1.86E-25 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS23295 48691fe400b06f0c2729b494cf62f333 75 Gene3D G3DSA:3.30.230.10 1 75 2.1E-32 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC12D_RS08475 80b386cd48e4e0604b24b940e5b49aab 179 PANTHER PTHR35850:SF1 2 176 3.3E-106 T 22-04-2016 RPIC12D_RS08475 80b386cd48e4e0604b24b940e5b49aab 179 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 163 1.7E-58 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 RPIC12D_RS08475 80b386cd48e4e0604b24b940e5b49aab 179 PANTHER PTHR35850 2 176 3.3E-106 T 22-04-2016 RPIC12D_RS08475 80b386cd48e4e0604b24b940e5b49aab 179 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 162 2.9E-59 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 RPIC12D_RS08475 80b386cd48e4e0604b24b940e5b49aab 179 PIRSF PIRSF028301 3 176 4.3E-62 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 RPIC12D_RS07450 7cd4eb0aa28c3f7eeb4a02930ee5e611 622 SUPERFAMILY SSF47203 310 483 1.61E-37 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS07450 7cd4eb0aa28c3f7eeb4a02930ee5e611 622 Gene3D G3DSA:2.40.110.10 160 278 6.4E-24 T 22-04-2016 RPIC12D_RS07450 7cd4eb0aa28c3f7eeb4a02930ee5e611 622 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 493 618 8.3E-32 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RPIC12D_RS07450 7cd4eb0aa28c3f7eeb4a02930ee5e611 622 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 277 4.7E-12 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC12D_RS07450 7cd4eb0aa28c3f7eeb4a02930ee5e611 622 Gene3D G3DSA:1.20.140.10 305 479 3.3E-45 T 22-04-2016 RPIC12D_RS07450 7cd4eb0aa28c3f7eeb4a02930ee5e611 622 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 5 34 3.0E-10 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RPIC12D_RS07450 7cd4eb0aa28c3f7eeb4a02930ee5e611 622 PANTHER PTHR10909:SF269 1 500 6.1E-205 T 22-04-2016 RPIC12D_RS07450 7cd4eb0aa28c3f7eeb4a02930ee5e611 622 SUPERFAMILY SSF56645 36 278 2.88E-40 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC12D_RS07450 7cd4eb0aa28c3f7eeb4a02930ee5e611 622 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 306 474 9.2E-19 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS07450 7cd4eb0aa28c3f7eeb4a02930ee5e611 622 PANTHER PTHR10909 1 500 6.1E-205 T 22-04-2016 RPIC12D_RS07450 7cd4eb0aa28c3f7eeb4a02930ee5e611 622 Gene3D G3DSA:1.10.540.10 36 156 4.2E-6 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS02900 8d25afbb20da11f67931a2f36de6d7de 297 Pfam PF00248 Aldo/keto reductase family 3 266 5.1E-24 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RPIC12D_RS02900 8d25afbb20da11f67931a2f36de6d7de 297 Gene3D G3DSA:3.20.20.100 2 264 2.0E-28 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RPIC12D_RS02900 8d25afbb20da11f67931a2f36de6d7de 297 PRINTS PR00069 Aldo-keto reductase signature 35 59 7.7E-5 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC12D_RS02900 8d25afbb20da11f67931a2f36de6d7de 297 PRINTS PR00069 Aldo-keto reductase signature 94 112 7.7E-5 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC12D_RS02900 8d25afbb20da11f67931a2f36de6d7de 297 PRINTS PR00069 Aldo-keto reductase signature 127 144 7.7E-5 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC12D_RS02900 8d25afbb20da11f67931a2f36de6d7de 297 PANTHER PTHR11732 2 262 6.2E-21 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RPIC12D_RS02900 8d25afbb20da11f67931a2f36de6d7de 297 SUPERFAMILY SSF51430 3 264 1.17E-35 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RPIC12D_RS02900 8d25afbb20da11f67931a2f36de6d7de 297 PANTHER PTHR11732:SF14 2 262 6.2E-21 T 22-04-2016 RPIC12D_RS11600 82e89d95e88d3552bae82bd995bf4f92 395 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 216 253 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS11600 82e89d95e88d3552bae82bd995bf4f92 395 PIRSF PIRSF000521 19 394 1.4E-42 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS11600 82e89d95e88d3552bae82bd995bf4f92 395 PANTHER PTHR11986 10 391 4.6E-169 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS11600 82e89d95e88d3552bae82bd995bf4f92 395 Pfam PF00202 Aminotransferase class-III 19 389 5.1E-99 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS11600 82e89d95e88d3552bae82bd995bf4f92 395 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 8 392 40.432 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 RPIC12D_RS11600 82e89d95e88d3552bae82bd995bf4f92 395 PANTHER PTHR11986:SF88 10 391 4.6E-169 T 22-04-2016 RPIC12D_RS11600 82e89d95e88d3552bae82bd995bf4f92 395 SUPERFAMILY SSF53383 7 391 1.36E-111 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS11600 82e89d95e88d3552bae82bd995bf4f92 395 Gene3D G3DSA:3.40.640.10 57 293 5.8E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS11600 82e89d95e88d3552bae82bd995bf4f92 395 Gene3D G3DSA:3.90.1150.10 11 54 1.0E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS11600 82e89d95e88d3552bae82bd995bf4f92 395 Gene3D G3DSA:3.90.1150.10 299 393 1.0E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS06620 aef23a31381b439f61e66e9186b1fd1a 629 Pfam PF00005 ABC transporter 41 204 6.0E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS06620 aef23a31381b439f61e66e9186b1fd1a 629 Pfam PF00005 ABC transporter 350 499 8.4E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS06620 aef23a31381b439f61e66e9186b1fd1a 629 SMART SM00382 49 254 1.7E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS06620 aef23a31381b439f61e66e9186b1fd1a 629 SMART SM00382 358 558 1.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS06620 aef23a31381b439f61e66e9186b1fd1a 629 PANTHER PTHR24220:SF442 22 316 2.2E-187 T 22-04-2016 RPIC12D_RS06620 aef23a31381b439f61e66e9186b1fd1a 629 SUPERFAMILY SSF52540 323 572 8.1E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06620 aef23a31381b439f61e66e9186b1fd1a 629 PANTHER PTHR24220:SF442 349 459 2.2E-187 T 22-04-2016 RPIC12D_RS06620 aef23a31381b439f61e66e9186b1fd1a 629 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 552 586 4.9E-9 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIC12D_RS06620 aef23a31381b439f61e66e9186b1fd1a 629 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 256 286 3.7E-8 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIC12D_RS06620 aef23a31381b439f61e66e9186b1fd1a 629 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS06620 aef23a31381b439f61e66e9186b1fd1a 629 SUPERFAMILY SSF52540 20 276 7.48E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06620 aef23a31381b439f61e66e9186b1fd1a 629 ProSitePatterns PS00211 ABC transporters family signature. 177 191 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS06620 aef23a31381b439f61e66e9186b1fd1a 629 Gene3D G3DSA:3.40.50.300 321 574 2.5E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06620 aef23a31381b439f61e66e9186b1fd1a 629 Gene3D G3DSA:3.40.50.300 20 278 1.1E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06620 aef23a31381b439f61e66e9186b1fd1a 629 PANTHER PTHR24220 22 316 2.2E-187 T 22-04-2016 RPIC12D_RS06620 aef23a31381b439f61e66e9186b1fd1a 629 PANTHER PTHR24220 349 459 2.2E-187 T 22-04-2016 RPIC12D_RS09650 87fd1007dab6f0d7c31ecf46999f83d5 192 Gene3D G3DSA:1.25.40.10 88 192 4.1E-35 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS09650 87fd1007dab6f0d7c31ecf46999f83d5 192 PANTHER PTHR23004 6 192 2.8E-66 T 22-04-2016 RPIC12D_RS09650 87fd1007dab6f0d7c31ecf46999f83d5 192 SUPERFAMILY SSF48452 4 188 6.45E-63 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS09650 87fd1007dab6f0d7c31ecf46999f83d5 192 Gene3D G3DSA:1.20.58.320 4 86 2.4E-31 T 22-04-2016 RPIC12D_RS09650 87fd1007dab6f0d7c31ecf46999f83d5 192 Pfam PF06041 Bacterial protein of unknown function (DUF924) 10 189 3.2E-61 T 22-04-2016 IPR010323 Protein of unknown function DUF924 RPIC12D_RS09650 87fd1007dab6f0d7c31ecf46999f83d5 192 PANTHER PTHR23004:SF7 6 192 2.8E-66 T 22-04-2016 RPIC12D_RS15995 7749b17971860a6226ca4c73ec41b1eb 156 SUPERFAMILY SSF81573 62 121 6.15E-11 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain RPIC12D_RS15995 7749b17971860a6226ca4c73ec41b1eb 156 PANTHER PTHR33445 1 156 2.8E-37 T 22-04-2016 RPIC12D_RS15995 7749b17971860a6226ca4c73ec41b1eb 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.534 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RPIC12D_RS15995 7749b17971860a6226ca4c73ec41b1eb 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.2E-41 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 RPIC12D_RS15995 7749b17971860a6226ca4c73ec41b1eb 156 Gene3D G3DSA:1.20.5.620 62 121 2.2E-11 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain RPIC12D_RS15995 7749b17971860a6226ca4c73ec41b1eb 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 3.8E-30 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 ProSitePatterns PS01008 DnaA protein signature. 487 506 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 Gene3D G3DSA:3.40.50.300 191 358 5.8E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 Gene3D G3DSA:1.10.8.60 360 427 8.8E-30 T 22-04-2016 RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 PANTHER PTHR30050 1 103 2.4E-193 T 22-04-2016 RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 PANTHER PTHR30050 192 529 2.4E-193 T 22-04-2016 RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 Pfam PF00308 Bacterial dnaA protein 194 411 2.3E-87 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 SUPERFAMILY SSF52540 194 405 3.37E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 527 1.9E-169 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 SMART SM00382 226 360 9.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 Pfam PF11638 DnaA N-terminal domain 3 64 1.5E-16 T 22-04-2016 IPR024633 DnaA N-terminal domain RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 PANTHER PTHR30050:SF2 1 103 2.4E-193 T 22-04-2016 RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 PANTHER PTHR30050:SF2 192 529 2.4E-193 T 22-04-2016 RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 SUPERFAMILY SSF48295 425 528 2.88E-37 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 SMART SM00760 437 506 1.2E-41 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 2 528 31.978 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 Gene3D G3DSA:1.10.1750.10 428 528 1.9E-41 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 227 247 4.7E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 487 506 4.7E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 325 352 4.7E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 291 305 4.7E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 259 273 4.7E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RPIC12D_RS00005 6771267667117f347718b02003d2fe68 529 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 438 506 2.2E-31 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RPIC12D_RS02440 e90fcc902fa24fb5ff63ed20d49602f1 304 PIRSF PIRSF006493 1 304 5.2E-94 T 22-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type RPIC12D_RS02440 e90fcc902fa24fb5ff63ed20d49602f1 304 Gene3D G3DSA:2.40.290.10 5 155 6.5E-11 T 22-04-2016 IPR016194 SPOC-like, C-terminal domain RPIC12D_RS02440 e90fcc902fa24fb5ff63ed20d49602f1 304 PANTHER PTHR41251 3 302 1.0E-86 T 22-04-2016 RPIC12D_RS02440 e90fcc902fa24fb5ff63ed20d49602f1 304 TIGRFAM TIGR02772 Ku_bact: Ku protein 3 265 2.0E-100 T 22-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type RPIC12D_RS02440 e90fcc902fa24fb5ff63ed20d49602f1 304 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 2 263 32.267 T 22-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type RPIC12D_RS02440 e90fcc902fa24fb5ff63ed20d49602f1 304 Pfam PF02735 Ku70/Ku80 beta-barrel domain 12 195 1.7E-39 T 22-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 RPIC12D_RS02440 e90fcc902fa24fb5ff63ed20d49602f1 304 PANTHER PTHR41251:SF1 3 302 1.0E-86 T 22-04-2016 RPIC12D_RS02440 e90fcc902fa24fb5ff63ed20d49602f1 304 SMART SM00559 53 181 1.3E-35 T 22-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 RPIC12D_RS02440 e90fcc902fa24fb5ff63ed20d49602f1 304 SUPERFAMILY SSF100939 1 265 8.83E-51 T 22-04-2016 IPR016194 SPOC-like, C-terminal domain RPIC12D_RS17060 5097f0b8b1c903f8b5482f2cf8d99c5d 211 SUPERFAMILY SSF53335 21 196 9.3E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS17060 5097f0b8b1c903f8b5482f2cf8d99c5d 211 PANTHER PTHR10108 17 184 2.8E-44 T 22-04-2016 RPIC12D_RS17060 5097f0b8b1c903f8b5482f2cf8d99c5d 211 PANTHER PTHR10108:SF831 17 184 2.8E-44 T 22-04-2016 RPIC12D_RS17060 5097f0b8b1c903f8b5482f2cf8d99c5d 211 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 21 208 7.8E-85 T 22-04-2016 IPR010743 Methionine biosynthesis MetW RPIC12D_RS17060 5097f0b8b1c903f8b5482f2cf8d99c5d 211 Pfam PF07021 Methionine biosynthesis protein MetW 21 208 9.9E-85 T 22-04-2016 IPR010743 Methionine biosynthesis MetW RPIC12D_RS17060 5097f0b8b1c903f8b5482f2cf8d99c5d 211 Gene3D G3DSA:3.40.50.150 26 186 2.3E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS00830 2c3e08890c4780ebaccd745693ff7a58 385 SUPERFAMILY SSF52151 3 256 2.46E-38 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC12D_RS00830 2c3e08890c4780ebaccd745693ff7a58 385 PANTHER PTHR14226 107 156 2.1E-62 T 22-04-2016 RPIC12D_RS00830 2c3e08890c4780ebaccd745693ff7a58 385 PANTHER PTHR14226 1 84 2.1E-62 T 22-04-2016 RPIC12D_RS00830 2c3e08890c4780ebaccd745693ff7a58 385 PANTHER PTHR14226 174 328 2.1E-62 T 22-04-2016 RPIC12D_RS00830 2c3e08890c4780ebaccd745693ff7a58 385 PANTHER PTHR14226:SF34 107 156 2.1E-62 T 22-04-2016 RPIC12D_RS00830 2c3e08890c4780ebaccd745693ff7a58 385 PANTHER PTHR14226:SF34 1 84 2.1E-62 T 22-04-2016 RPIC12D_RS00830 2c3e08890c4780ebaccd745693ff7a58 385 PANTHER PTHR14226:SF34 174 328 2.1E-62 T 22-04-2016 RPIC12D_RS00830 2c3e08890c4780ebaccd745693ff7a58 385 Pfam PF01734 Patatin-like phospholipase 2 219 4.7E-20 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RPIC12D_RS00830 2c3e08890c4780ebaccd745693ff7a58 385 Gene3D G3DSA:3.40.1090.10 3 220 3.0E-11 T 22-04-2016 RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 SUPERFAMILY SSF54862 205 387 2.84E-56 T 22-04-2016 RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 SUPERFAMILY SSF54862 582 684 2.84E-56 T 22-04-2016 RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 PANTHER PTHR24960:SF43 266 386 9.1E-71 T 22-04-2016 RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 PANTHER PTHR24960:SF43 583 714 9.1E-71 T 22-04-2016 RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 Gene3D G3DSA:3.30.70.20 330 373 1.6E-16 T 22-04-2016 RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 PANTHER PTHR24960 266 386 9.1E-71 T 22-04-2016 RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 PANTHER PTHR24960 583 714 9.1E-71 T 22-04-2016 RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 Pfam PF00037 4Fe-4S binding domain 584 606 1.7E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 Pfam PF00037 4Fe-4S binding domain 206 227 6.8E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 Gene3D G3DSA:3.30.70.20 631 667 7.3E-4 T 22-04-2016 RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 Gene3D G3DSA:3.30.70.20 582 630 2.7E-13 T 22-04-2016 RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 Pfam PF12838 4Fe-4S dicluster domain 334 380 7.8E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 591 602 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 622 633 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 211 222 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 366 377 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 Gene3D G3DSA:1.10.1060.10 374 385 4.9E-12 T 22-04-2016 RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 Gene3D G3DSA:1.10.1060.10 465 491 4.9E-12 T 22-04-2016 RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 Gene3D G3DSA:3.30.70.20 199 261 2.0E-10 T 22-04-2016 RPIC12D_RS10985 a3baaf244217742fd0694b23f490a60b 719 Pfam PF12800 4Fe-4S binding domain 621 633 0.041 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC12D_RS00575 c7b3373879925f56b6cc2404b28d8867 528 SUPERFAMILY SSF56801 18 519 3.4E-152 T 22-04-2016 RPIC12D_RS00575 c7b3373879925f56b6cc2404b28d8867 528 Pfam PF13193 AMP-binding enzyme C-terminal domain 434 509 4.3E-23 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC12D_RS00575 c7b3373879925f56b6cc2404b28d8867 528 ProSitePatterns PS00455 Putative AMP-binding domain signature. 179 190 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC12D_RS00575 c7b3373879925f56b6cc2404b28d8867 528 Gene3D G3DSA:3.30.300.30 420 517 2.8E-31 T 22-04-2016 RPIC12D_RS00575 c7b3373879925f56b6cc2404b28d8867 528 Gene3D G3DSA:3.40.50.980 19 184 1.6E-43 T 22-04-2016 RPIC12D_RS00575 c7b3373879925f56b6cc2404b28d8867 528 Gene3D G3DSA:3.40.50.980 185 342 2.7E-41 T 22-04-2016 RPIC12D_RS00575 c7b3373879925f56b6cc2404b28d8867 528 Pfam PF00501 AMP-binding enzyme 25 425 3.1E-100 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC12D_RS00575 c7b3373879925f56b6cc2404b28d8867 528 Gene3D G3DSA:2.30.38.10 346 415 5.3E-22 T 22-04-2016 RPIC12D_RS00575 c7b3373879925f56b6cc2404b28d8867 528 PANTHER PTHR24096 16 516 3.4E-159 T 22-04-2016 RPIC12D_RS08875 157e44fd12422c18bb7d70ee6b4d6400 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 321 5.6E-23 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIC12D_RS08875 157e44fd12422c18bb7d70ee6b4d6400 334 PANTHER PTHR24220 11 321 7.8E-138 T 22-04-2016 RPIC12D_RS08875 157e44fd12422c18bb7d70ee6b4d6400 334 Pfam PF00005 ABC transporter 30 187 4.1E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS08875 157e44fd12422c18bb7d70ee6b4d6400 334 SUPERFAMILY SSF52540 10 258 1.2E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08875 157e44fd12422c18bb7d70ee6b4d6400 334 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS08875 157e44fd12422c18bb7d70ee6b4d6400 334 PANTHER PTHR24220:SF535 11 321 7.8E-138 T 22-04-2016 RPIC12D_RS08875 157e44fd12422c18bb7d70ee6b4d6400 334 SMART SM00382 38 245 8.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS08875 157e44fd12422c18bb7d70ee6b4d6400 334 Gene3D G3DSA:3.40.50.300 9 261 3.1E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08875 157e44fd12422c18bb7d70ee6b4d6400 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 303 7.2E-20 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIC12D_RS00680 215b52a49e4be645e73d816b49947bb8 165 SUPERFAMILY SSF46955 29 146 2.67E-25 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC12D_RS00680 215b52a49e4be645e73d816b49947bb8 165 Gene3D G3DSA:1.10.1660.10 86 149 2.2E-14 T 22-04-2016 RPIC12D_RS00680 215b52a49e4be645e73d816b49947bb8 165 SMART SM00422 29 99 2.4E-14 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS00680 215b52a49e4be645e73d816b49947bb8 165 Gene3D G3DSA:1.10.1660.10 28 85 1.9E-19 T 22-04-2016 RPIC12D_RS00680 215b52a49e4be645e73d816b49947bb8 165 Pfam PF13411 MerR HTH family regulatory protein 29 97 1.9E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS00680 215b52a49e4be645e73d816b49947bb8 165 PANTHER PTHR30204:SF1 21 146 1.3E-17 T 22-04-2016 RPIC12D_RS00680 215b52a49e4be645e73d816b49947bb8 165 PANTHER PTHR30204 21 146 1.3E-17 T 22-04-2016 RPIC12D_RS14280 58cb3617151c882db9060e2d3f79a8bc 165 Pfam PF04386 Stringent starvation protein B 5 165 5.8E-37 T 22-04-2016 IPR007481 Stringent starvation protein B RPIC12D_RS14280 58cb3617151c882db9060e2d3f79a8bc 165 PANTHER PTHR37486:SF1 1 165 6.3E-48 T 22-04-2016 RPIC12D_RS14280 58cb3617151c882db9060e2d3f79a8bc 165 PIRSF PIRSF005276 1 165 1.6E-53 T 22-04-2016 IPR007481 Stringent starvation protein B RPIC12D_RS14280 58cb3617151c882db9060e2d3f79a8bc 165 PANTHER PTHR37486 1 165 6.3E-48 T 22-04-2016 RPIC12D_RS14280 58cb3617151c882db9060e2d3f79a8bc 165 SUPERFAMILY SSF101738 2 116 4.05E-46 T 22-04-2016 IPR007481 Stringent starvation protein B RPIC12D_RS14280 58cb3617151c882db9060e2d3f79a8bc 165 Gene3D G3DSA:2.30.30.220 2 105 3.1E-48 T 22-04-2016 IPR007481 Stringent starvation protein B RPIC12D_RS14735 51e0308cf21414c8ce4c3bb27495453d 109 Pfam PF00237 Ribosomal protein L22p/L17e 9 107 5.2E-32 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14735 51e0308cf21414c8ce4c3bb27495453d 109 PANTHER PTHR13501 1 107 1.1E-45 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RPIC12D_RS14735 51e0308cf21414c8ce4c3bb27495453d 109 Gene3D G3DSA:3.90.470.10 1 108 4.7E-41 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14735 51e0308cf21414c8ce4c3bb27495453d 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14735 51e0308cf21414c8ce4c3bb27495453d 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 24.682 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RPIC12D_RS14735 51e0308cf21414c8ce4c3bb27495453d 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 106 4.2E-43 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RPIC12D_RS14735 51e0308cf21414c8ce4c3bb27495453d 109 SUPERFAMILY SSF54843 1 108 2.75E-40 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS02115 827578b7ca9fe82fd93804f20c522c43 456 SUPERFAMILY SSF102114 127 372 1.57E-60 T 22-04-2016 RPIC12D_RS02115 827578b7ca9fe82fd93804f20c522c43 456 PANTHER PTHR11918:SF43 1 446 2.0E-199 T 22-04-2016 RPIC12D_RS02115 827578b7ca9fe82fd93804f20c522c43 456 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 2 448 73.806 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 RPIC12D_RS02115 827578b7ca9fe82fd93804f20c522c43 456 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 RPIC12D_RS02115 827578b7ca9fe82fd93804f20c522c43 456 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 444 2.5E-146 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 RPIC12D_RS02115 827578b7ca9fe82fd93804f20c522c43 456 SMART SM00729 146 367 1.2E-57 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC12D_RS02115 827578b7ca9fe82fd93804f20c522c43 456 PANTHER PTHR11918 1 446 2.0E-199 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein RPIC12D_RS02115 827578b7ca9fe82fd93804f20c522c43 456 Pfam PF04055 Radical SAM superfamily 150 325 4.5E-30 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC12D_RS02115 827578b7ca9fe82fd93804f20c522c43 456 Pfam PF00919 Uncharacterized protein family UPF0004 3 103 2.4E-29 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 RPIC12D_RS02115 827578b7ca9fe82fd93804f20c522c43 456 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 3 446 1.0E-172 T 22-04-2016 RPIC12D_RS02115 827578b7ca9fe82fd93804f20c522c43 456 Pfam PF01938 TRAM domain 380 446 4.1E-13 T 22-04-2016 IPR002792 TRAM domain RPIC12D_RS02115 827578b7ca9fe82fd93804f20c522c43 456 Gene3D G3DSA:3.80.30.20 145 377 3.0E-79 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RPIC12D_RS13250 f2aef2bf616fe1bef6162388c1e7e796 471 Pfam PF02978 Signal peptide binding domain 343 442 3.3E-32 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RPIC12D_RS13250 f2aef2bf616fe1bef6162388c1e7e796 471 SMART SM00382 113 315 9.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS13250 f2aef2bf616fe1bef6162388c1e7e796 471 Gene3D G3DSA:1.10.260.30 343 446 2.0E-37 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RPIC12D_RS13250 f2aef2bf616fe1bef6162388c1e7e796 471 SMART SM00962 114 310 2.8E-116 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC12D_RS13250 f2aef2bf616fe1bef6162388c1e7e796 471 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 444 5.8E-171 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RPIC12D_RS13250 f2aef2bf616fe1bef6162388c1e7e796 471 Pfam PF00448 SRP54-type protein, GTPase domain 115 310 6.5E-72 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC12D_RS13250 f2aef2bf616fe1bef6162388c1e7e796 471 Gene3D G3DSA:1.20.120.140 2 89 9.0E-32 T 22-04-2016 RPIC12D_RS13250 f2aef2bf616fe1bef6162388c1e7e796 471 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 7.7E-18 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC12D_RS13250 f2aef2bf616fe1bef6162388c1e7e796 471 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 454 33.054 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 RPIC12D_RS13250 f2aef2bf616fe1bef6162388c1e7e796 471 SMART SM00963 1 86 1.3E-29 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC12D_RS13250 f2aef2bf616fe1bef6162388c1e7e796 471 SUPERFAMILY SSF47446 343 445 1.64E-34 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RPIC12D_RS13250 f2aef2bf616fe1bef6162388c1e7e796 471 Gene3D G3DSA:3.40.50.300 108 311 2.1E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13250 f2aef2bf616fe1bef6162388c1e7e796 471 PANTHER PTHR11564 1 450 6.3E-246 T 22-04-2016 RPIC12D_RS13250 f2aef2bf616fe1bef6162388c1e7e796 471 SUPERFAMILY SSF52540 42 372 6.48E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13250 f2aef2bf616fe1bef6162388c1e7e796 471 PANTHER PTHR11564:SF7 1 450 6.3E-246 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RPIC12D_RS05590 bd82f63ca3d2201f5bc41762f289bc51 318 Gene3D G3DSA:3.40.1090.10 47 214 1.8E-21 T 22-04-2016 RPIC12D_RS05590 bd82f63ca3d2201f5bc41762f289bc51 318 SUPERFAMILY SSF52151 2 304 1.36E-61 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC12D_RS05590 bd82f63ca3d2201f5bc41762f289bc51 318 PANTHER PTHR14226:SF24 51 305 6.6E-75 T 22-04-2016 RPIC12D_RS05590 bd82f63ca3d2201f5bc41762f289bc51 318 PANTHER PTHR14226 51 305 6.6E-75 T 22-04-2016 RPIC12D_RS05590 bd82f63ca3d2201f5bc41762f289bc51 318 Pfam PF01734 Patatin-like phospholipase 54 214 8.6E-28 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RPIC12D_RS11580 358f923cdaa403dfd97364bb036127ad 605 PANTHER PTHR11689:SF14 18 593 3.0E-61 T 22-04-2016 RPIC12D_RS11580 358f923cdaa403dfd97364bb036127ad 605 Pfam PF00654 Voltage gated chloride channel 78 410 4.8E-70 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RPIC12D_RS11580 358f923cdaa403dfd97364bb036127ad 605 SMART SM00116 519 569 5.8E-4 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS11580 358f923cdaa403dfd97364bb036127ad 605 SMART SM00116 453 505 89.0 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS11580 358f923cdaa403dfd97364bb036127ad 605 Pfam PF00571 CBS domain 520 566 1.2E-4 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS11580 358f923cdaa403dfd97364bb036127ad 605 Pfam PF00571 CBS domain 446 501 9.5E-5 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS11580 358f923cdaa403dfd97364bb036127ad 605 Gene3D G3DSA:3.20.20.70 444 590 2.4E-13 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS11580 358f923cdaa403dfd97364bb036127ad 605 Gene3D G3DSA:1.10.3080.10 9 432 4.8E-68 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RPIC12D_RS11580 358f923cdaa403dfd97364bb036127ad 605 SUPERFAMILY SSF54631 438 566 3.05E-16 T 22-04-2016 RPIC12D_RS11580 358f923cdaa403dfd97364bb036127ad 605 SUPERFAMILY SSF81340 8 435 1.7E-93 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RPIC12D_RS11580 358f923cdaa403dfd97364bb036127ad 605 PRINTS PR00762 Chloride channel signature 121 140 3.8E-13 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RPIC12D_RS11580 358f923cdaa403dfd97364bb036127ad 605 PRINTS PR00762 Chloride channel signature 172 191 3.8E-13 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RPIC12D_RS11580 358f923cdaa403dfd97364bb036127ad 605 PRINTS PR00762 Chloride channel signature 363 379 3.8E-13 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RPIC12D_RS11580 358f923cdaa403dfd97364bb036127ad 605 PRINTS PR00762 Chloride channel signature 381 400 3.8E-13 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RPIC12D_RS11580 358f923cdaa403dfd97364bb036127ad 605 PANTHER PTHR11689 18 593 3.0E-61 T 22-04-2016 RPIC12D_RS12310 9bc36bc708f583390714ac7d16249363 214 PANTHER PTHR10513:SF16 9 202 2.2E-29 T 22-04-2016 RPIC12D_RS12310 9bc36bc708f583390714ac7d16249363 214 PIRSF PIRSF000705 1 208 3.3E-50 T 22-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 RPIC12D_RS12310 9bc36bc708f583390714ac7d16249363 214 PANTHER PTHR10513 9 202 2.2E-29 T 22-04-2016 RPIC12D_RS12310 9bc36bc708f583390714ac7d16249363 214 Gene3D G3DSA:3.40.50.300 7 201 6.2E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12310 9bc36bc708f583390714ac7d16249363 214 Pfam PF01712 Deoxynucleoside kinase 9 200 4.9E-29 T 22-04-2016 IPR031314 Deoxynucleoside kinase domain RPIC12D_RS12310 9bc36bc708f583390714ac7d16249363 214 SUPERFAMILY SSF52540 6 204 4.88E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07845 e740ad1fe54a66648035e771e38c9c92 73 Gene3D G3DSA:1.10.443.10 1 38 1.5E-4 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS07845 e740ad1fe54a66648035e771e38c9c92 73 SUPERFAMILY SSF56349 1 37 7.06E-5 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC12D_RS16600 c53b6dccf995ba5571372e29e30e2c1e 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.6E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS16600 c53b6dccf995ba5571372e29e30e2c1e 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.6E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS16600 c53b6dccf995ba5571372e29e30e2c1e 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.6E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS16600 c53b6dccf995ba5571372e29e30e2c1e 294 PANTHER PTHR30579:SF0 1 294 1.0E-64 T 22-04-2016 RPIC12D_RS16600 c53b6dccf995ba5571372e29e30e2c1e 294 PANTHER PTHR30579 1 294 1.0E-64 T 22-04-2016 RPIC12D_RS16600 c53b6dccf995ba5571372e29e30e2c1e 294 Gene3D G3DSA:3.40.190.10 87 190 5.2E-22 T 22-04-2016 RPIC12D_RS16600 c53b6dccf995ba5571372e29e30e2c1e 294 SUPERFAMILY SSF53850 90 284 5.53E-29 T 22-04-2016 RPIC12D_RS16600 c53b6dccf995ba5571372e29e30e2c1e 294 Gene3D G3DSA:1.10.10.10 5 86 5.7E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16600 c53b6dccf995ba5571372e29e30e2c1e 294 SUPERFAMILY SSF46785 5 112 5.91E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16600 c53b6dccf995ba5571372e29e30e2c1e 294 Pfam PF03466 LysR substrate binding domain 90 281 7.1E-30 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS16600 c53b6dccf995ba5571372e29e30e2c1e 294 Gene3D G3DSA:3.40.190.10 191 234 2.3E-6 T 22-04-2016 RPIC12D_RS16600 c53b6dccf995ba5571372e29e30e2c1e 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 2.6E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS00910 96c79aa5e43f404e8d1d460c29250c05 333 Pfam PF04055 Radical SAM superfamily 103 263 1.2E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC12D_RS00910 96c79aa5e43f404e8d1d460c29250c05 333 TIGRFAM TIGR00510 lipA: lipoyl synthase 45 327 8.5E-128 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RPIC12D_RS00910 96c79aa5e43f404e8d1d460c29250c05 333 SUPERFAMILY SSF102114 64 329 4.71E-68 T 22-04-2016 RPIC12D_RS00910 96c79aa5e43f404e8d1d460c29250c05 333 SMART SM00729 96 304 4.7E-20 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC12D_RS00910 96c79aa5e43f404e8d1d460c29250c05 333 Gene3D G3DSA:3.20.20.70 65 326 1.8E-73 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS00910 96c79aa5e43f404e8d1d460c29250c05 333 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 44 85 2.7E-6 T 22-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RPIC12D_RS00910 96c79aa5e43f404e8d1d460c29250c05 333 Hamap MF_00206 Lipoyl synthase [lipA]. 48 333 151.965 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RPIC12D_RS00910 96c79aa5e43f404e8d1d460c29250c05 333 PANTHER PTHR10949 45 332 1.8E-163 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RPIC12D_RS00910 96c79aa5e43f404e8d1d460c29250c05 333 PIRSF PIRSF005963 3 332 3.0E-128 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RPIC12D_RS00460 dc10cbc5703c128b0c36b76422a8e0ef 400 PANTHER PTHR11730 1 397 7.8E-110 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RPIC12D_RS00460 dc10cbc5703c128b0c36b76422a8e0ef 400 ProSitePatterns PS01219 Ammonium transporters signature. 156 181 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 RPIC12D_RS00460 dc10cbc5703c128b0c36b76422a8e0ef 400 Gene3D G3DSA:1.10.3430.10 3 374 4.8E-92 T 22-04-2016 IPR029020 Ammonium/urea transporter RPIC12D_RS00460 dc10cbc5703c128b0c36b76422a8e0ef 400 Pfam PF00909 Ammonium Transporter Family 12 389 1.4E-86 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RPIC12D_RS00460 dc10cbc5703c128b0c36b76422a8e0ef 400 PANTHER PTHR11730:SF6 1 397 7.8E-110 T 22-04-2016 RPIC12D_RS00460 dc10cbc5703c128b0c36b76422a8e0ef 400 SUPERFAMILY SSF111352 7 374 4.71E-93 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RPIC12D_RS02660 5d82dcbff71203c77e408bf453e28df1 96 SMART SM00883 2 94 1.8E-56 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC12D_RS02660 5d82dcbff71203c77e408bf453e28df1 96 PANTHER PTHR10772 1 95 9.0E-43 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC12D_RS02660 5d82dcbff71203c77e408bf453e28df1 96 SUPERFAMILY SSF50129 1 95 6.85E-35 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS02660 5d82dcbff71203c77e408bf453e28df1 96 PRINTS PR00297 10kDa chaperonin signature 81 94 1.7E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC12D_RS02660 5d82dcbff71203c77e408bf453e28df1 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.7E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC12D_RS02660 5d82dcbff71203c77e408bf453e28df1 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.7E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC12D_RS02660 5d82dcbff71203c77e408bf453e28df1 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.7E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC12D_RS02660 5d82dcbff71203c77e408bf453e28df1 96 Gene3D G3DSA:2.30.33.40 1 95 9.2E-39 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC12D_RS02660 5d82dcbff71203c77e408bf453e28df1 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.783 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC12D_RS02660 5d82dcbff71203c77e408bf453e28df1 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 2.5E-35 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC12D_RS02660 5d82dcbff71203c77e408bf453e28df1 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 RPIC12D_RS12845 d0d2752183b829563ce13be25ca87f3f 442 SMART SM00388 220 288 3.2E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS12845 d0d2752183b829563ce13be25ca87f3f 442 PANTHER PTHR24423 190 442 6.0E-56 T 22-04-2016 RPIC12D_RS12845 d0d2752183b829563ce13be25ca87f3f 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 283 6.5E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS12845 d0d2752183b829563ce13be25ca87f3f 442 PANTHER PTHR24423:SF497 190 442 6.0E-56 T 22-04-2016 RPIC12D_RS12845 d0d2752183b829563ce13be25ca87f3f 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 440 1.8E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS12845 d0d2752183b829563ce13be25ca87f3f 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 420 3.1E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS12845 d0d2752183b829563ce13be25ca87f3f 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 439 3.1E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS12845 d0d2752183b829563ce13be25ca87f3f 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 385 3.1E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS12845 d0d2752183b829563ce13be25ca87f3f 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 399 3.1E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS12845 d0d2752183b829563ce13be25ca87f3f 442 SUPERFAMILY SSF47384 215 283 4.71E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS12845 d0d2752183b829563ce13be25ca87f3f 442 SUPERFAMILY SSF55874 306 440 1.22E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS12845 d0d2752183b829563ce13be25ca87f3f 442 SMART SM00387 330 442 1.1E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS12845 d0d2752183b829563ce13be25ca87f3f 442 Gene3D G3DSA:3.30.565.10 298 440 4.6E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS08060 7d87868a8bbb3e973b4dc0dbb394ea50 254 PANTHER PTHR21367:SF0 20 246 2.4E-57 T 22-04-2016 RPIC12D_RS08060 7d87868a8bbb3e973b4dc0dbb394ea50 254 PANTHER PTHR21367 20 246 2.4E-57 T 22-04-2016 IPR030700 Arginine-tRNA-protein transferase RPIC12D_RS08060 7d87868a8bbb3e973b4dc0dbb394ea50 254 SUPERFAMILY SSF55729 84 244 2.7E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS08060 7d87868a8bbb3e973b4dc0dbb394ea50 254 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 20 90 1.1E-17 T 22-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 RPIC12D_RS08060 7d87868a8bbb3e973b4dc0dbb394ea50 254 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 110 237 1.3E-37 T 22-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 RPIC12D_RS08060 7d87868a8bbb3e973b4dc0dbb394ea50 254 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 3 246 44.447 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic RPIC12D_RS08060 7d87868a8bbb3e973b4dc0dbb394ea50 254 PIRSF PIRSF037208 3 254 2.7E-93 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic RPIC12D_RS04670 bd9ebdb94bd1b0884e9021bcc64b0370 195 Gene3D G3DSA:3.40.109.10 2 193 1.1E-45 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RPIC12D_RS04670 bd9ebdb94bd1b0884e9021bcc64b0370 195 PANTHER PTHR23026:SF110 1 191 6.1E-80 T 22-04-2016 RPIC12D_RS04670 bd9ebdb94bd1b0884e9021bcc64b0370 195 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 1 195 47.664 T 22-04-2016 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 RPIC12D_RS04670 bd9ebdb94bd1b0884e9021bcc64b0370 195 SUPERFAMILY SSF55469 9 194 4.97E-47 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RPIC12D_RS04670 bd9ebdb94bd1b0884e9021bcc64b0370 195 PANTHER PTHR23026 1 191 6.1E-80 T 22-04-2016 RPIC12D_RS04670 bd9ebdb94bd1b0884e9021bcc64b0370 195 Pfam PF00881 Nitroreductase family 17 173 1.7E-15 T 22-04-2016 IPR029479 Nitroreductase RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 Pfam PF09382 RQC domain 424 538 2.9E-36 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 SUPERFAMILY SSF52540 23 217 5.2E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 Pfam PF00271 Helicase conserved C-terminal domain 257 349 2.8E-14 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 25 485 3.9E-151 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 SMART SM00956 429 536 6.2E-52 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 Pfam PF00570 HRDC domain 565 628 3.2E-20 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 SMART SM00341 559 636 2.7E-11 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 Gene3D G3DSA:1.10.10.10 362 538 3.4E-56 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 SUPERFAMILY SSF47819 557 632 3.27E-19 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 PANTHER PTHR13710:SF81 11 631 3.3E-276 T 22-04-2016 RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 Pfam PF16124 RecQ zinc-binding 361 422 9.7E-18 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 23 630 1.3E-237 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 SUPERFAMILY SSF46785 420 563 9.11E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 Gene3D G3DSA:3.40.50.300 219 361 4.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 SMART SM00487 31 231 9.8E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 Gene3D G3DSA:3.40.50.300 23 214 4.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 SMART SM00490 268 349 1.3E-24 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 PANTHER PTHR13710 11 631 3.3E-276 T 22-04-2016 RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 Pfam PF00270 DEAD/DEAH box helicase 39 198 2.8E-20 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 SUPERFAMILY SSF52540 221 474 3.88E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14800 a820aa9ec5824f39e1c8162306ef9668 636 Gene3D G3DSA:1.10.150.80 565 634 2.4E-14 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RPIC12D_RS15430 741396627079dcb23e29e4e5bbb9abde 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 395 414 3.4E-7 T 22-04-2016 RPIC12D_RS15430 741396627079dcb23e29e4e5bbb9abde 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 124 148 3.4E-7 T 22-04-2016 RPIC12D_RS15430 741396627079dcb23e29e4e5bbb9abde 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 3 27 3.4E-7 T 22-04-2016 RPIC12D_RS15430 741396627079dcb23e29e4e5bbb9abde 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 94 114 3.4E-7 T 22-04-2016 RPIC12D_RS15430 741396627079dcb23e29e4e5bbb9abde 467 Gene3D G3DSA:1.20.1250.20 2 186 9.2E-28 T 22-04-2016 RPIC12D_RS15430 741396627079dcb23e29e4e5bbb9abde 467 SUPERFAMILY SSF103473 2 194 6.28E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS15430 741396627079dcb23e29e4e5bbb9abde 467 SUPERFAMILY SSF103473 243 465 6.28E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS15430 741396627079dcb23e29e4e5bbb9abde 467 PANTHER PTHR23501:SF31 1 465 2.4E-106 T 22-04-2016 RPIC12D_RS15430 741396627079dcb23e29e4e5bbb9abde 467 Gene3D G3DSA:1.20.1250.20 258 460 4.7E-15 T 22-04-2016 RPIC12D_RS15430 741396627079dcb23e29e4e5bbb9abde 467 PANTHER PTHR23501 1 465 2.4E-106 T 22-04-2016 RPIC12D_RS15430 741396627079dcb23e29e4e5bbb9abde 467 Pfam PF07690 Major Facilitator Superfamily 5 404 6.9E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 202 334 4.8E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 PANTHER PTHR11638 1 859 0.0 T 22-04-2016 RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 SUPERFAMILY SSF52540 549 854 1.45E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 SMART SM01086 768 857 1.3E-36 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 634 652 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 SUPERFAMILY SSF81923 4 140 1.7E-37 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 PANTHER PTHR11638:SF18 1 859 0.0 T 22-04-2016 RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 762 6.3E-55 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 678 696 1.3E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 1.3E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 711 725 1.3E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 667 1.3E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 768 846 2.6E-26 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 293 305 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 SUPERFAMILY SSF52540 158 547 9.88E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 Gene3D G3DSA:3.40.50.300 553 778 6.8E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 SMART SM00382 600 769 3.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 SMART SM00382 197 343 5.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.1E-14 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 144 2.6E-8 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 Gene3D G3DSA:1.10.8.60 342 427 4.9E-37 T 22-04-2016 RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 Gene3D G3DSA:1.10.8.60 779 858 2.9E-30 T 22-04-2016 RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 Gene3D G3DSA:1.10.1780.10 1 146 1.2E-43 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 Gene3D G3DSA:3.40.50.300 158 340 1.7E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06385 a6062a7eae2d5a26f4fb48ccf97b1f4f 862 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 857 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 RPIC12D_RS02145 e9f88d655722022db23312407b83686d 439 PANTHER PTHR18919:SF5 5 435 1.9E-176 T 22-04-2016 RPIC12D_RS02145 e9f88d655722022db23312407b83686d 439 Pfam PF02803 Thiolase, C-terminal domain 303 433 9.7E-32 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RPIC12D_RS02145 e9f88d655722022db23312407b83686d 439 Gene3D G3DSA:3.40.47.10 217 291 1.4E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS02145 e9f88d655722022db23312407b83686d 439 Gene3D G3DSA:3.40.47.10 10 129 1.4E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS02145 e9f88d655722022db23312407b83686d 439 Pfam PF00108 Thiolase, N-terminal domain 10 279 5.0E-51 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RPIC12D_RS02145 e9f88d655722022db23312407b83686d 439 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 12 432 4.7E-116 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC12D_RS02145 e9f88d655722022db23312407b83686d 439 Gene3D G3DSA:3.40.47.10 301 433 3.0E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS02145 e9f88d655722022db23312407b83686d 439 Gene3D G3DSA:3.40.47.10 170 216 3.0E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS02145 e9f88d655722022db23312407b83686d 439 SUPERFAMILY SSF53901 10 286 7.04E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS02145 e9f88d655722022db23312407b83686d 439 PIRSF PIRSF000429 5 435 8.9E-106 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC12D_RS02145 e9f88d655722022db23312407b83686d 439 SUPERFAMILY SSF53901 310 433 3.49E-30 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS02145 e9f88d655722022db23312407b83686d 439 PANTHER PTHR18919 5 435 1.9E-176 T 22-04-2016 RPIC12D_RS12455 9da814640d9463e0e0286b159b18777e 947 SUPERFAMILY SSF81593 288 452 1.57E-41 T 22-04-2016 RPIC12D_RS12455 9da814640d9463e0e0286b159b18777e 947 SUPERFAMILY SSF81301 10 287 9.81E-72 T 22-04-2016 RPIC12D_RS12455 9da814640d9463e0e0286b159b18777e 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 29 269 8.7E-63 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RPIC12D_RS12455 9da814640d9463e0e0286b159b18777e 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 567 805 1.5E-63 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RPIC12D_RS12455 9da814640d9463e0e0286b159b18777e 947 PANTHER PTHR30621 16 915 2.9E-235 T 22-04-2016 RPIC12D_RS12455 9da814640d9463e0e0286b159b18777e 947 Pfam PF08335 GlnD PII-uridylyltransferase 827 915 4.1E-7 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RPIC12D_RS12455 9da814640d9463e0e0286b159b18777e 947 Pfam PF08335 GlnD PII-uridylyltransferase 299 452 1.9E-45 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RPIC12D_RS12455 9da814640d9463e0e0286b159b18777e 947 Gene3D G3DSA:3.30.460.10 652 811 5.1E-51 T 22-04-2016 RPIC12D_RS12455 9da814640d9463e0e0286b159b18777e 947 Gene3D G3DSA:3.30.460.10 108 285 5.0E-58 T 22-04-2016 RPIC12D_RS12455 9da814640d9463e0e0286b159b18777e 947 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 21 945 19.279 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 RPIC12D_RS12455 9da814640d9463e0e0286b159b18777e 947 SUPERFAMILY SSF81301 540 813 4.25E-74 T 22-04-2016 RPIC12D_RS12455 9da814640d9463e0e0286b159b18777e 947 SUPERFAMILY SSF81593 818 944 6.51E-28 T 22-04-2016 RPIC12D_RS14655 36fd6242dd5f1cefed23e1d78423951d 72 PANTHER PTHR33370 1 72 1.5E-47 T 22-04-2016 RPIC12D_RS14655 36fd6242dd5f1cefed23e1d78423951d 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.956 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RPIC12D_RS14655 36fd6242dd5f1cefed23e1d78423951d 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 2.7E-36 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RPIC12D_RS14655 36fd6242dd5f1cefed23e1d78423951d 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.8E-26 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 RPIC12D_RS14655 36fd6242dd5f1cefed23e1d78423951d 72 SUPERFAMILY SSF50249 1 70 9.71E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS14655 36fd6242dd5f1cefed23e1d78423951d 72 Gene3D G3DSA:2.40.50.140 1 72 3.6E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS07715 45a2e12d071186057309e5b8ddad5b39 424 Gene3D G3DSA:1.10.8.60 317 418 1.5E-36 T 22-04-2016 RPIC12D_RS07715 45a2e12d071186057309e5b8ddad5b39 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 416 53.601 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RPIC12D_RS07715 45a2e12d071186057309e5b8ddad5b39 424 SMART SM00994 12 51 8.7E-24 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RPIC12D_RS07715 45a2e12d071186057309e5b8ddad5b39 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 413 1.2E-204 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RPIC12D_RS07715 45a2e12d071186057309e5b8ddad5b39 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 115 311 5.4E-49 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS07715 45a2e12d071186057309e5b8ddad5b39 424 SMART SM00382 114 266 1.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS07715 45a2e12d071186057309e5b8ddad5b39 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 318 393 4.9E-15 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RPIC12D_RS07715 45a2e12d071186057309e5b8ddad5b39 424 Pfam PF06689 ClpX C4-type zinc finger 13 49 3.4E-20 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RPIC12D_RS07715 45a2e12d071186057309e5b8ddad5b39 424 PANTHER PTHR11262 9 416 3.7E-246 T 22-04-2016 RPIC12D_RS07715 45a2e12d071186057309e5b8ddad5b39 424 SUPERFAMILY SSF57716 13 48 1.01E-11 T 22-04-2016 RPIC12D_RS07715 45a2e12d071186057309e5b8ddad5b39 424 SUPERFAMILY SSF52540 64 399 3.23E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07715 45a2e12d071186057309e5b8ddad5b39 424 Gene3D G3DSA:3.40.50.300 68 256 1.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07715 45a2e12d071186057309e5b8ddad5b39 424 Gene3D G3DSA:3.40.50.300 295 312 1.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07715 45a2e12d071186057309e5b8ddad5b39 424 SMART SM01086 318 413 1.0E-33 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RPIC12D_RS06545 b27753125a6159a76400246aa89d0983 156 SUPERFAMILY SSF55961 2 151 3.3E-48 T 22-04-2016 RPIC12D_RS06545 b27753125a6159a76400246aa89d0983 156 Pfam PF08982 Domain of unknown function (DUF1857) 8 153 1.7E-32 T 22-04-2016 IPR015075 Protein of unknown function DUF1857 RPIC12D_RS06545 b27753125a6159a76400246aa89d0983 156 Gene3D G3DSA:3.30.530.20 2 155 1.0E-59 T 22-04-2016 IPR023393 START-like domain RPIC12D_RS13350 f7b856d08558b5866ffc6734cd1f3ceb 553 SUPERFAMILY SSF52540 4 310 1.44E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13350 f7b856d08558b5866ffc6734cd1f3ceb 553 Pfam PF13175 AAA ATPase domain 140 305 1.9E-19 T 22-04-2016 RPIC12D_RS13350 f7b856d08558b5866ffc6734cd1f3ceb 553 PANTHER PTHR32182:SF7 227 390 3.6E-16 T 22-04-2016 RPIC12D_RS13350 f7b856d08558b5866ffc6734cd1f3ceb 553 Gene3D G3DSA:3.40.50.300 4 312 2.1E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13350 f7b856d08558b5866ffc6734cd1f3ceb 553 PANTHER PTHR32182 227 390 3.6E-16 T 22-04-2016 RPIC12D_RS13950 7e3017e5d3c5b3a7a9ff1857a5f5114d 448 PANTHER PTHR11662 17 443 4.9E-130 T 22-04-2016 RPIC12D_RS13950 7e3017e5d3c5b3a7a9ff1857a5f5114d 448 PANTHER PTHR11662:SF3 17 443 4.9E-130 T 22-04-2016 RPIC12D_RS13950 7e3017e5d3c5b3a7a9ff1857a5f5114d 448 SUPERFAMILY SSF103473 16 443 4.58E-81 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS13950 7e3017e5d3c5b3a7a9ff1857a5f5114d 448 Gene3D G3DSA:1.20.1250.20 26 230 4.9E-45 T 22-04-2016 RPIC12D_RS13950 7e3017e5d3c5b3a7a9ff1857a5f5114d 448 Gene3D G3DSA:1.20.1250.20 254 441 5.0E-20 T 22-04-2016 RPIC12D_RS13950 7e3017e5d3c5b3a7a9ff1857a5f5114d 448 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 39 436 8.2E-134 T 22-04-2016 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS13950 7e3017e5d3c5b3a7a9ff1857a5f5114d 448 Pfam PF07690 Major Facilitator Superfamily 37 402 3.9E-47 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS15210 61ca8990d67a98db7f2fb2c02a3b72b9 436 PIRSF PIRSF037238 35 428 6.9E-100 T 22-04-2016 IPR017150 Peptidase M20, glutamate carboxypeptidase RPIC12D_RS15210 61ca8990d67a98db7f2fb2c02a3b72b9 436 Pfam PF07687 Peptidase dimerisation domain 227 326 6.6E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS15210 61ca8990d67a98db7f2fb2c02a3b72b9 436 PANTHER PTHR11014 14 432 8.5E-139 T 22-04-2016 RPIC12D_RS15210 61ca8990d67a98db7f2fb2c02a3b72b9 436 Gene3D G3DSA:3.30.70.360 235 334 7.3E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS15210 61ca8990d67a98db7f2fb2c02a3b72b9 436 SUPERFAMILY SSF53187 349 426 8.29E-48 T 22-04-2016 RPIC12D_RS15210 61ca8990d67a98db7f2fb2c02a3b72b9 436 SUPERFAMILY SSF53187 36 237 8.29E-48 T 22-04-2016 RPIC12D_RS15210 61ca8990d67a98db7f2fb2c02a3b72b9 436 SUPERFAMILY SSF55031 229 340 1.29E-20 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS15210 61ca8990d67a98db7f2fb2c02a3b72b9 436 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 121 130 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RPIC12D_RS15210 61ca8990d67a98db7f2fb2c02a3b72b9 436 Gene3D G3DSA:3.40.630.10 36 234 1.6E-50 T 22-04-2016 RPIC12D_RS15210 61ca8990d67a98db7f2fb2c02a3b72b9 436 Gene3D G3DSA:3.40.630.10 338 427 1.6E-50 T 22-04-2016 RPIC12D_RS15210 61ca8990d67a98db7f2fb2c02a3b72b9 436 Pfam PF01546 Peptidase family M20/M25/M40 122 425 5.0E-27 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC12D_RS15210 61ca8990d67a98db7f2fb2c02a3b72b9 436 PANTHER PTHR11014:SF64 14 432 8.5E-139 T 22-04-2016 RPIC12D_RS15210 61ca8990d67a98db7f2fb2c02a3b72b9 436 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 153 192 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RPIC12D_RS03535 935d8d3f5799a986019fddf26096ece8 370 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 105 3.8E-21 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 RPIC12D_RS03535 935d8d3f5799a986019fddf26096ece8 370 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 94 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RPIC12D_RS03535 935d8d3f5799a986019fddf26096ece8 370 Gene3D G3DSA:3.40.430.10 135 366 2.3E-74 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain RPIC12D_RS03535 935d8d3f5799a986019fddf26096ece8 370 Gene3D G3DSA:3.40.140.10 6 134 2.9E-35 T 22-04-2016 RPIC12D_RS03535 935d8d3f5799a986019fddf26096ece8 370 PIRSF PIRSF006769 1 367 1.3E-121 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 RPIC12D_RS03535 935d8d3f5799a986019fddf26096ece8 370 SUPERFAMILY SSF53597 151 365 1.16E-57 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain RPIC12D_RS03535 935d8d3f5799a986019fddf26096ece8 370 PANTHER PTHR11079 241 263 5.4E-61 T 22-04-2016 RPIC12D_RS03535 935d8d3f5799a986019fddf26096ece8 370 PANTHER PTHR11079 1 218 5.4E-61 T 22-04-2016 RPIC12D_RS03535 935d8d3f5799a986019fddf26096ece8 370 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 360 2.2E-109 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 RPIC12D_RS03535 935d8d3f5799a986019fddf26096ece8 370 PANTHER PTHR11079:SF10 241 263 5.4E-61 T 22-04-2016 RPIC12D_RS03535 935d8d3f5799a986019fddf26096ece8 370 PANTHER PTHR11079:SF10 1 218 5.4E-61 T 22-04-2016 RPIC12D_RS03535 935d8d3f5799a986019fddf26096ece8 370 Pfam PF01872 RibD C-terminal domain 153 341 1.2E-46 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 RPIC12D_RS03535 935d8d3f5799a986019fddf26096ece8 370 SUPERFAMILY SSF53927 6 150 1.66E-47 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RPIC12D_RS03535 935d8d3f5799a986019fddf26096ece8 370 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 152 363 2.4E-54 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 RPIC12D_RS06840 4a949fe3df0c23776a4ffc5cf82b2b8e 795 SUPERFAMILY SSF52009 356 470 2.49E-33 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC12D_RS06840 4a949fe3df0c23776a4ffc5cf82b2b8e 795 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 348 5.2E-116 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 RPIC12D_RS06840 4a949fe3df0c23776a4ffc5cf82b2b8e 795 Gene3D G3DSA:3.50.30.10 378 479 1.4E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC12D_RS06840 4a949fe3df0c23776a4ffc5cf82b2b8e 795 Gene3D G3DSA:3.30.1490.20 9 199 4.6E-67 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC12D_RS06840 4a949fe3df0c23776a4ffc5cf82b2b8e 795 SUPERFAMILY SSF51621 469 792 1.02E-92 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS06840 4a949fe3df0c23776a4ffc5cf82b2b8e 795 Gene3D G3DSA:3.20.20.60 486 792 1.7E-99 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS06840 4a949fe3df0c23776a4ffc5cf82b2b8e 795 PANTHER PTHR22931:SF7 10 792 0.0 T 22-04-2016 RPIC12D_RS06840 4a949fe3df0c23776a4ffc5cf82b2b8e 795 PANTHER PTHR22931 10 792 0.0 T 22-04-2016 RPIC12D_RS06840 4a949fe3df0c23776a4ffc5cf82b2b8e 795 PIRSF PIRSF000854 5 795 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC12D_RS06840 4a949fe3df0c23776a4ffc5cf82b2b8e 795 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 699 717 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RPIC12D_RS06840 4a949fe3df0c23776a4ffc5cf82b2b8e 795 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 484 790 3.0E-60 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RPIC12D_RS06840 4a949fe3df0c23776a4ffc5cf82b2b8e 795 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 419 430 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RPIC12D_RS06840 4a949fe3df0c23776a4ffc5cf82b2b8e 795 Pfam PF00391 PEP-utilising enzyme, mobile domain 389 460 4.8E-26 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC12D_RS06840 4a949fe3df0c23776a4ffc5cf82b2b8e 795 Gene3D G3DSA:3.30.470.20 202 361 4.3E-58 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC12D_RS06840 4a949fe3df0c23776a4ffc5cf82b2b8e 795 SUPERFAMILY SSF56059 10 390 3.18E-108 T 22-04-2016 RPIC12D_RS06840 4a949fe3df0c23776a4ffc5cf82b2b8e 795 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 792 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC12D_RS09955 7246d1775fd255e8bd60ef710891f876 215 SUPERFAMILY SSF50891 86 210 6.07E-46 T 22-04-2016 IPR029000 Cyclophilin-like domain RPIC12D_RS09955 7246d1775fd255e8bd60ef710891f876 215 Pfam PF02682 Allophanate hydrolase subunit 1 4 200 3.4E-72 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D RPIC12D_RS09955 7246d1775fd255e8bd60ef710891f876 215 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 8 209 4.9E-79 T 22-04-2016 IPR010016 KipI family RPIC12D_RS09955 7246d1775fd255e8bd60ef710891f876 215 SUPERFAMILY SSF160467 4 88 8.24E-10 T 22-04-2016 RPIC12D_RS09955 7246d1775fd255e8bd60ef710891f876 215 SMART SM00796 3 200 9.0E-104 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D RPIC12D_RS09955 7246d1775fd255e8bd60ef710891f876 215 Gene3D G3DSA:3.30.1360.40 4 76 1.0E-12 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain RPIC12D_RS09955 7246d1775fd255e8bd60ef710891f876 215 Gene3D G3DSA:2.40.100.10 86 210 1.2E-51 T 22-04-2016 IPR029000 Cyclophilin-like domain RPIC12D_RS09955 7246d1775fd255e8bd60ef710891f876 215 PANTHER PTHR34698 1 210 5.8E-88 T 22-04-2016 RPIC12D_RS09955 7246d1775fd255e8bd60ef710891f876 215 PANTHER PTHR34698:SF2 1 210 5.8E-88 T 22-04-2016 RPIC12D_RS05930 9ac430140ff5f973a3f89c9ca034baa2 471 PANTHER PTHR20852:SF15 4 140 3.9E-257 T 22-04-2016 RPIC12D_RS05930 9ac430140ff5f973a3f89c9ca034baa2 471 PANTHER PTHR20852:SF15 163 471 3.9E-257 T 22-04-2016 RPIC12D_RS05930 9ac430140ff5f973a3f89c9ca034baa2 471 PANTHER PTHR20852 4 140 3.9E-257 T 22-04-2016 RPIC12D_RS05930 9ac430140ff5f973a3f89c9ca034baa2 471 PANTHER PTHR20852 163 471 3.9E-257 T 22-04-2016 RPIC12D_RS05930 9ac430140ff5f973a3f89c9ca034baa2 471 SUPERFAMILY SSF54368 5 102 4.58E-37 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIC12D_RS05930 9ac430140ff5f973a3f89c9ca034baa2 471 Gene3D G3DSA:3.10.20.70 5 107 2.1E-41 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIC12D_RS05930 9ac430140ff5f973a3f89c9ca034baa2 471 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIC12D_RS05930 9ac430140ff5f973a3f89c9ca034baa2 471 Gene3D G3DSA:3.30.590.10 108 458 5.1E-139 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 RPIC12D_RS05930 9ac430140ff5f973a3f89c9ca034baa2 471 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIC12D_RS05930 9ac430140ff5f973a3f89c9ca034baa2 471 Pfam PF00120 Glutamine synthetase, catalytic domain 105 468 7.9E-137 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIC12D_RS05930 9ac430140ff5f973a3f89c9ca034baa2 471 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 97 1.1E-30 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIC12D_RS05930 9ac430140ff5f973a3f89c9ca034baa2 471 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 470 3.6E-202 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIC12D_RS05930 9ac430140ff5f973a3f89c9ca034baa2 471 SUPERFAMILY SSF55931 104 470 2.06E-137 T 22-04-2016 RPIC12D_RS05930 9ac430140ff5f973a3f89c9ca034baa2 471 SMART SM01230 104 381 1.0E-145 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIC12D_RS05930 9ac430140ff5f973a3f89c9ca034baa2 471 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 388 400 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIC12D_RS15070 c65f1a12ccdf2abfca200b313629b9c0 238 PANTHER PTHR11571 1 229 8.1E-102 T 22-04-2016 RPIC12D_RS15070 c65f1a12ccdf2abfca200b313629b9c0 238 Pfam PF14497 Glutathione S-transferase, C-terminal domain 108 216 7.9E-30 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RPIC12D_RS15070 c65f1a12ccdf2abfca200b313629b9c0 238 SUPERFAMILY SSF52833 2 81 1.22E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS15070 c65f1a12ccdf2abfca200b313629b9c0 238 Gene3D G3DSA:1.20.1050.10 101 206 1.5E-52 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS15070 c65f1a12ccdf2abfca200b313629b9c0 238 PANTHER PTHR11571:SF139 1 229 8.1E-102 T 22-04-2016 RPIC12D_RS15070 c65f1a12ccdf2abfca200b313629b9c0 238 Gene3D G3DSA:3.40.30.10 1 100 1.2E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS15070 c65f1a12ccdf2abfca200b313629b9c0 238 SUPERFAMILY SSF47616 107 233 4.69E-24 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS14400 617d3cdac6117cc9a380595cb88f9dec 217 Gene3D G3DSA:3.40.50.880 1 215 4.8E-76 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS14400 617d3cdac6117cc9a380595cb88f9dec 217 PIRSF PIRSF000495 2 217 9.7E-67 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 RPIC12D_RS14400 617d3cdac6117cc9a380595cb88f9dec 217 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 214 4.2E-61 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 RPIC12D_RS14400 617d3cdac6117cc9a380595cb88f9dec 217 PANTHER PTHR21235:SF1 4 215 1.3E-77 T 22-04-2016 RPIC12D_RS14400 617d3cdac6117cc9a380595cb88f9dec 217 Pfam PF00117 Glutamine amidotransferase class-I 6 212 2.2E-17 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RPIC12D_RS14400 617d3cdac6117cc9a380595cb88f9dec 217 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 215 34.918 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 RPIC12D_RS14400 617d3cdac6117cc9a380595cb88f9dec 217 SUPERFAMILY SSF52317 2 215 1.35E-50 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS14400 617d3cdac6117cc9a380595cb88f9dec 217 PANTHER PTHR21235 4 215 1.3E-77 T 22-04-2016 RPIC12D_RS14070 c15986e323d047435c8db8beb0cace1c 555 Pfam PF12848 ABC transporter 230 306 5.0E-12 T 22-04-2016 IPR032781 ABC-transporter extension domain RPIC12D_RS14070 c15986e323d047435c8db8beb0cace1c 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 552 4.8E-297 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD RPIC12D_RS14070 c15986e323d047435c8db8beb0cace1c 555 SUPERFAMILY SSF52540 301 523 2.75E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14070 c15986e323d047435c8db8beb0cace1c 555 SUPERFAMILY SSF52540 12 236 8.74E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14070 c15986e323d047435c8db8beb0cace1c 555 Gene3D G3DSA:3.40.50.300 141 288 2.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14070 c15986e323d047435c8db8beb0cace1c 555 Gene3D G3DSA:3.40.50.300 12 105 2.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14070 c15986e323d047435c8db8beb0cace1c 555 Pfam PF00005 ABC transporter 22 191 7.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS14070 c15986e323d047435c8db8beb0cace1c 555 Pfam PF00005 ABC transporter 340 473 2.1E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS14070 c15986e323d047435c8db8beb0cace1c 555 SMART SM00382 348 526 2.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS14070 c15986e323d047435c8db8beb0cace1c 555 SMART SM00382 31 236 1.0E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS14070 c15986e323d047435c8db8beb0cace1c 555 PANTHER PTHR19211:SF7 1 555 0.0 T 22-04-2016 RPIC12D_RS14070 c15986e323d047435c8db8beb0cace1c 555 PANTHER PTHR19211 1 555 0.0 T 22-04-2016 RPIC12D_RS14070 c15986e323d047435c8db8beb0cace1c 555 Gene3D G3DSA:3.40.50.300 321 536 3.8E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14070 c15986e323d047435c8db8beb0cace1c 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS14690 6bbba51fd244115357031236b78e2d46 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14690 6bbba51fd244115357031236b78e2d46 131 Gene3D G3DSA:3.30.1370.30 2 72 2.7E-29 T 22-04-2016 RPIC12D_RS14690 6bbba51fd244115357031236b78e2d46 131 SUPERFAMILY SSF56047 2 130 4.84E-48 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14690 6bbba51fd244115357031236b78e2d46 131 Gene3D G3DSA:3.30.1490.10 75 130 2.2E-27 T 22-04-2016 RPIC12D_RS14690 6bbba51fd244115357031236b78e2d46 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 32.245 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14690 6bbba51fd244115357031236b78e2d46 131 Pfam PF00410 Ribosomal protein S8 5 130 2.0E-49 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14690 6bbba51fd244115357031236b78e2d46 131 PANTHER PTHR11758 1 131 1.0E-59 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS09110 e6e4fb394ae64e0bd84a40431f382978 432 SUPERFAMILY SSF53244 289 426 3.3E-30 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC12D_RS09110 e6e4fb394ae64e0bd84a40431f382978 432 Gene3D G3DSA:3.40.1190.10 9 290 3.5E-90 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS09110 e6e4fb394ae64e0bd84a40431f382978 432 Pfam PF08245 Mur ligase middle domain 47 191 1.4E-10 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS09110 e6e4fb394ae64e0bd84a40431f382978 432 SUPERFAMILY SSF53623 7 287 6.54E-87 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS09110 e6e4fb394ae64e0bd84a40431f382978 432 PIRSF PIRSF001563 1 431 2.7E-104 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RPIC12D_RS09110 e6e4fb394ae64e0bd84a40431f382978 432 PANTHER PTHR11136 10 425 1.4E-113 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RPIC12D_RS09110 e6e4fb394ae64e0bd84a40431f382978 432 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 424 5.1E-99 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RPIC12D_RS09110 e6e4fb394ae64e0bd84a40431f382978 432 Pfam PF02875 Mur ligase family, glutamate ligase domain 290 342 1.6E-5 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC12D_RS09110 e6e4fb394ae64e0bd84a40431f382978 432 Gene3D G3DSA:3.90.190.20 291 426 2.8E-39 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC12D_RS11025 50b47c0c16183baa5c98dff341d5f061 595 Gene3D G3DSA:2.40.160.50 448 584 1.3E-9 T 22-04-2016 RPIC12D_RS11025 50b47c0c16183baa5c98dff341d5f061 595 PANTHER PTHR12815 76 584 2.0E-59 T 22-04-2016 RPIC12D_RS11025 50b47c0c16183baa5c98dff341d5f061 595 PANTHER PTHR12815:SF12 76 584 2.0E-59 T 22-04-2016 RPIC12D_RS11025 50b47c0c16183baa5c98dff341d5f061 595 Pfam PF01103 Surface antigen 386 583 1.1E-29 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 RPIC12D_RS12485 3ef95e40ed93c6e58ea30477f98c1005 185 Pfam PF01923 Cobalamin adenosyltransferase 8 165 4.4E-56 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RPIC12D_RS12485 3ef95e40ed93c6e58ea30477f98c1005 185 PANTHER PTHR12213 4 181 1.3E-69 T 22-04-2016 RPIC12D_RS12485 3ef95e40ed93c6e58ea30477f98c1005 185 SUPERFAMILY SSF89028 7 178 3.14E-61 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RPIC12D_RS12485 3ef95e40ed93c6e58ea30477f98c1005 185 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 10 178 8.7E-65 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RPIC12D_RS12485 3ef95e40ed93c6e58ea30477f98c1005 185 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 27 178 1.0E-73 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RPIC12D_RS12485 3ef95e40ed93c6e58ea30477f98c1005 185 Gene3D G3DSA:1.20.1200.10 17 181 1.3E-65 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RPIC12D_RS12485 3ef95e40ed93c6e58ea30477f98c1005 185 PANTHER PTHR12213:SF0 4 181 1.3E-69 T 22-04-2016 RPIC12D_RS06925 19d690aefdd24ffd47f877be5f4518bc 121 PANTHER PTHR30536 28 121 3.4E-34 T 22-04-2016 RPIC12D_RS06925 19d690aefdd24ffd47f877be5f4518bc 121 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 28 119 4.3E-29 T 22-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 RPIC12D_RS06925 19d690aefdd24ffd47f877be5f4518bc 121 PANTHER PTHR30536:SF5 28 121 3.4E-34 T 22-04-2016 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 PANTHER PTHR23115:SF66 6 184 0.0 T 22-04-2016 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 SUPERFAMILY SSF54211 486 612 1.74E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 SUPERFAMILY SSF52540 6 288 1.56E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 SMART SM00838 613 701 3.6E-55 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 Hamap MF_00054_B Elongation factor G [fusA]. 6 705 110.643 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 PANTHER PTHR23115 310 705 0.0 T 22-04-2016 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 PANTHER PTHR23115 6 184 0.0 T 22-04-2016 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 Gene3D G3DSA:3.40.50.300 6 293 5.3E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 Gene3D G3DSA:3.30.70.870 413 487 4.2E-39 T 22-04-2016 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 Pfam PF03144 Elongation factor Tu domain 2 331 398 2.3E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 PANTHER PTHR23115:SF66 310 705 0.0 T 22-04-2016 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 2.6E-31 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.8E-64 T 22-04-2016 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 SUPERFAMILY SSF50447 271 409 1.88E-35 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 Gene3D G3DSA:2.40.30.10 312 412 1.3E-38 T 22-04-2016 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 SMART SM00889 487 611 5.2E-71 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 705 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 Pfam PF00679 Elongation factor G C-terminus 613 699 2.3E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 Pfam PF03764 Elongation factor G, domain IV 486 610 2.7E-45 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 Gene3D G3DSA:3.30.230.10 491 611 2.2E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 SUPERFAMILY SSF54980 616 702 4.08E-28 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 SUPERFAMILY SSF54980 411 488 2.91E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 Gene3D G3DSA:3.30.70.240 612 699 4.5E-34 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RPIC12D_RS14775 91347903732ede9b550020e33d26bcaa 708 Pfam PF14492 Elongation Factor G, domain II 411 484 5.7E-35 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RPIC12D_RS14380 0f4ff75f8f97a44ddbea4e9d8cf5a0ac 124 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 99 21.835 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 RPIC12D_RS14380 0f4ff75f8f97a44ddbea4e9d8cf5a0ac 124 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 22 102 4.5E-13 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 RPIC12D_RS14380 0f4ff75f8f97a44ddbea4e9d8cf5a0ac 124 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 99 8.8E-27 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 RPIC12D_RS14380 0f4ff75f8f97a44ddbea4e9d8cf5a0ac 124 SUPERFAMILY SSF101386 4 103 9.53E-22 T 22-04-2016 RPIC12D_RS14380 0f4ff75f8f97a44ddbea4e9d8cf5a0ac 124 PANTHER PTHR21256 3 121 3.6E-34 T 22-04-2016 RPIC12D_RS07060 90899d3fa4da90fec63d0c47972c25c5 376 PANTHER PTHR21225 1 372 2.8E-219 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC12D_RS07060 90899d3fa4da90fec63d0c47972c25c5 376 Pfam PF00793 DAHP synthetase I family 60 358 6.0E-99 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RPIC12D_RS07060 90899d3fa4da90fec63d0c47972c25c5 376 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 26 370 5.5E-155 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC12D_RS07060 90899d3fa4da90fec63d0c47972c25c5 376 PIRSF PIRSF001361 15 373 8.9E-163 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC12D_RS07060 90899d3fa4da90fec63d0c47972c25c5 376 SUPERFAMILY SSF51569 28 369 1.6E-134 T 22-04-2016 RPIC12D_RS07060 90899d3fa4da90fec63d0c47972c25c5 376 Gene3D G3DSA:3.20.20.70 29 371 7.2E-155 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS05345 ce41ea6338beec6843dc2c7697444fd8 284 PANTHER PTHR21057 1 284 5.8E-158 T 22-04-2016 RPIC12D_RS05345 ce41ea6338beec6843dc2c7697444fd8 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 276 52.376 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RPIC12D_RS05345 ce41ea6338beec6843dc2c7697444fd8 284 SUPERFAMILY SSF51569 2 275 1.01E-100 T 22-04-2016 RPIC12D_RS05345 ce41ea6338beec6843dc2c7697444fd8 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 274 3.9E-122 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RPIC12D_RS05345 ce41ea6338beec6843dc2c7697444fd8 284 Pfam PF00793 DAHP synthetase I family 6 273 3.4E-67 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RPIC12D_RS05345 ce41ea6338beec6843dc2c7697444fd8 284 Gene3D G3DSA:3.20.20.70 11 276 1.6E-112 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS05345 ce41ea6338beec6843dc2c7697444fd8 284 PANTHER PTHR21057:SF2 1 284 5.8E-158 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RPIC12D_RS02895 027500f99d747ad9311b944ab7355907 382 SUPERFAMILY SSF53383 2 381 5.3E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS02895 027500f99d747ad9311b944ab7355907 382 Gene3D G3DSA:3.40.640.10 1 258 1.7E-80 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS02895 027500f99d747ad9311b944ab7355907 382 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 381 3.2E-169 T 22-04-2016 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase RPIC12D_RS02895 027500f99d747ad9311b944ab7355907 382 PIRSF PIRSF000390 1 382 2.2E-106 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RPIC12D_RS02895 027500f99d747ad9311b944ab7355907 382 PANTHER PTHR30244:SF3 1 382 4.8E-142 T 22-04-2016 RPIC12D_RS02895 027500f99d747ad9311b944ab7355907 382 Gene3D G3DSA:3.90.1150.10 260 381 1.2E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS02895 027500f99d747ad9311b944ab7355907 382 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 378 1.8E-109 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RPIC12D_RS02895 027500f99d747ad9311b944ab7355907 382 PANTHER PTHR30244 1 382 4.8E-142 T 22-04-2016 RPIC12D_RS11740 fe60b9c8b10b37a4b74f6b1af9143d5d 148 Pfam PF00692 dUTPase 15 146 4.1E-37 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 RPIC12D_RS11740 fe60b9c8b10b37a4b74f6b1af9143d5d 148 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 147 1.8E-46 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 RPIC12D_RS11740 fe60b9c8b10b37a4b74f6b1af9143d5d 148 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 5 147 33.291 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 RPIC12D_RS11740 fe60b9c8b10b37a4b74f6b1af9143d5d 148 PANTHER PTHR11241 4 147 2.6E-46 T 22-04-2016 RPIC12D_RS11740 fe60b9c8b10b37a4b74f6b1af9143d5d 148 SUPERFAMILY SSF51283 3 147 7.33E-51 T 22-04-2016 IPR029054 dUTPase-like RPIC12D_RS11740 fe60b9c8b10b37a4b74f6b1af9143d5d 148 Gene3D G3DSA:2.70.40.10 5 147 4.2E-51 T 22-04-2016 IPR029054 dUTPase-like RPIC12D_RS14530 a204bb613ae4dbadb80b572ca794a8d6 219 Pfam PF04350 Pilus assembly protein, PilO 62 199 1.4E-41 T 22-04-2016 IPR007445 Pilus assembly protein, PilO RPIC12D_RS14530 a204bb613ae4dbadb80b572ca794a8d6 219 Gene3D G3DSA:3.30.70.60 104 209 2.1E-31 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RPIC12D_RS14530 a204bb613ae4dbadb80b572ca794a8d6 219 Gene3D G3DSA:1.10.287.540 68 96 2.7E-4 T 22-04-2016 IPR023218 UPF0291 structural domain RPIC12D_RS14530 a204bb613ae4dbadb80b572ca794a8d6 219 PANTHER PTHR39555:SF1 10 212 4.9E-37 T 22-04-2016 RPIC12D_RS14530 a204bb613ae4dbadb80b572ca794a8d6 219 PIRSF PIRSF016482 10 215 4.2E-44 T 22-04-2016 IPR007445 Pilus assembly protein, PilO RPIC12D_RS14530 a204bb613ae4dbadb80b572ca794a8d6 219 PANTHER PTHR39555 10 212 4.9E-37 T 22-04-2016 RPIC12D_RS15445 3ea6e40e41319ac884f0af02a8a76881 378 SMART SM00086 98 140 0.0021 T 22-04-2016 IPR001610 PAC motif RPIC12D_RS15445 3ea6e40e41319ac884f0af02a8a76881 378 PANTHER PTHR24423 22 144 5.3E-45 T 22-04-2016 RPIC12D_RS15445 3ea6e40e41319ac884f0af02a8a76881 378 PANTHER PTHR24423 243 249 5.3E-45 T 22-04-2016 RPIC12D_RS15445 3ea6e40e41319ac884f0af02a8a76881 378 Pfam PF13426 PAS domain 37 139 1.8E-15 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS15445 3ea6e40e41319ac884f0af02a8a76881 378 PANTHER PTHR24423:SF416 22 144 5.3E-45 T 22-04-2016 RPIC12D_RS15445 3ea6e40e41319ac884f0af02a8a76881 378 PANTHER PTHR24423:SF416 243 249 5.3E-45 T 22-04-2016 RPIC12D_RS15445 3ea6e40e41319ac884f0af02a8a76881 378 SUPERFAMILY SSF55874 233 366 2.61E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS15445 3ea6e40e41319ac884f0af02a8a76881 378 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 145 4.2E-21 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS15445 3ea6e40e41319ac884f0af02a8a76881 378 Pfam PF07730 Histidine kinase 163 232 1.3E-13 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RPIC12D_RS15445 3ea6e40e41319ac884f0af02a8a76881 378 SUPERFAMILY SSF55785 23 132 1.13E-25 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS15445 3ea6e40e41319ac884f0af02a8a76881 378 Gene3D G3DSA:3.30.450.20 23 138 2.3E-24 T 22-04-2016 RPIC12D_RS15445 3ea6e40e41319ac884f0af02a8a76881 378 SMART SM00091 24 91 8.8E-4 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS10965 28e0d9163b4d7bb047b7b114f9aff913 222 Gene3D G3DSA:3.30.70.20 120 176 7.8E-21 T 22-04-2016 RPIC12D_RS10965 28e0d9163b4d7bb047b7b114f9aff913 222 Gene3D G3DSA:3.30.70.20 3 63 7.8E-21 T 22-04-2016 RPIC12D_RS10965 28e0d9163b4d7bb047b7b114f9aff913 222 Gene3D G3DSA:3.30.70.20 64 119 4.1E-22 T 22-04-2016 RPIC12D_RS10965 28e0d9163b4d7bb047b7b114f9aff913 222 PANTHER PTHR11938:SF96 1 124 2.5E-90 T 22-04-2016 RPIC12D_RS10965 28e0d9163b4d7bb047b7b114f9aff913 222 PANTHER PTHR11938:SF96 142 178 2.5E-90 T 22-04-2016 RPIC12D_RS10965 28e0d9163b4d7bb047b7b114f9aff913 222 Pfam PF13247 4Fe-4S dicluster domain 53 164 1.7E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC12D_RS10965 28e0d9163b4d7bb047b7b114f9aff913 222 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC12D_RS10965 28e0d9163b4d7bb047b7b114f9aff913 222 PANTHER PTHR11938 1 124 2.5E-90 T 22-04-2016 RPIC12D_RS10965 28e0d9163b4d7bb047b7b114f9aff913 222 PANTHER PTHR11938 142 178 2.5E-90 T 22-04-2016 RPIC12D_RS10965 28e0d9163b4d7bb047b7b114f9aff913 222 SUPERFAMILY SSF54862 1 181 7.22E-50 T 22-04-2016 RPIC12D_RS10965 28e0d9163b4d7bb047b7b114f9aff913 222 PRINTS PR00354 7Fe ferredoxin signature 66 76 9.5E-6 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RPIC12D_RS10965 28e0d9163b4d7bb047b7b114f9aff913 222 PRINTS PR00354 7Fe ferredoxin signature 56 66 9.5E-6 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RPIC12D_RS10965 28e0d9163b4d7bb047b7b114f9aff913 222 PRINTS PR00354 7Fe ferredoxin signature 83 100 9.5E-6 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RPIC12D_RS14750 a7e3dade5d2be9055508267c4a1da30f 104 Gene3D G3DSA:3.30.70.330 10 101 2.5E-33 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 RPIC12D_RS14750 a7e3dade5d2be9055508267c4a1da30f 104 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 12 102 21.772 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14750 a7e3dade5d2be9055508267c4a1da30f 104 SUPERFAMILY SSF54189 8 97 8.99E-30 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14750 a7e3dade5d2be9055508267c4a1da30f 104 Pfam PF00276 Ribosomal protein L23 13 99 1.6E-30 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14750 a7e3dade5d2be9055508267c4a1da30f 104 PANTHER PTHR11620 12 97 6.8E-25 T 22-04-2016 RPIC12D_RS15655 958f08bd59cb89cd3836561003d4b845 170 Pfam PF08534 Redoxin 37 159 4.0E-12 T 22-04-2016 IPR013740 Redoxin GO:0016491 RPIC12D_RS15655 958f08bd59cb89cd3836561003d4b845 170 PANTHER PTHR10681 3 163 2.1E-12 T 22-04-2016 RPIC12D_RS15655 958f08bd59cb89cd3836561003d4b845 170 PANTHER PTHR10681:SF68 3 163 2.1E-12 T 22-04-2016 RPIC12D_RS15655 958f08bd59cb89cd3836561003d4b845 170 Gene3D G3DSA:3.40.30.10 7 161 4.9E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS15655 958f08bd59cb89cd3836561003d4b845 170 SUPERFAMILY SSF52833 4 158 3.53E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS08740 0484c80b1a12a69fb16f67936549b109 150 Pfam PF00959 Phage lysozyme 37 142 3.3E-22 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 RPIC12D_RS08740 0484c80b1a12a69fb16f67936549b109 150 SUPERFAMILY SSF53955 9 150 1.38E-50 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC12D_RS08740 0484c80b1a12a69fb16f67936549b109 150 PANTHER PTHR38107 12 150 2.3E-43 T 22-04-2016 RPIC12D_RS08740 0484c80b1a12a69fb16f67936549b109 150 Gene3D G3DSA:1.10.530.40 10 150 2.4E-53 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 RPIC12D_RS08740 0484c80b1a12a69fb16f67936549b109 150 PANTHER PTHR38107:SF2 12 150 2.3E-43 T 22-04-2016 RPIC12D_RS05370 84fdfa3323a47918a1f57d7f240fbaa7 337 Pfam PF01430 Hsp33 protein 3 312 3.8E-83 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 RPIC12D_RS05370 84fdfa3323a47918a1f57d7f240fbaa7 337 Gene3D G3DSA:3.55.30.10 1 184 9.3E-63 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 RPIC12D_RS05370 84fdfa3323a47918a1f57d7f240fbaa7 337 PANTHER PTHR30111:SF1 1 327 2.6E-53 T 22-04-2016 RPIC12D_RS05370 84fdfa3323a47918a1f57d7f240fbaa7 337 PIRSF PIRSF005261 1 324 3.1E-69 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 RPIC12D_RS05370 84fdfa3323a47918a1f57d7f240fbaa7 337 Gene3D G3DSA:3.90.1280.10 265 322 1.7E-24 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 RPIC12D_RS05370 84fdfa3323a47918a1f57d7f240fbaa7 337 PANTHER PTHR30111 1 327 2.6E-53 T 22-04-2016 RPIC12D_RS05370 84fdfa3323a47918a1f57d7f240fbaa7 337 Gene3D G3DSA:1.10.287.480 213 264 1.6E-8 T 22-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain RPIC12D_RS05370 84fdfa3323a47918a1f57d7f240fbaa7 337 SUPERFAMILY SSF118352 264 321 2.09E-18 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 RPIC12D_RS05370 84fdfa3323a47918a1f57d7f240fbaa7 337 SUPERFAMILY SSF64397 3 188 6.54E-60 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 RPIC12D_RS05370 84fdfa3323a47918a1f57d7f240fbaa7 337 SUPERFAMILY SSF64397 216 271 6.54E-60 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 RPIC12D_RS19595 7f82e590abb101e21180d16321152815 209 SUPERFAMILY SSF53474 86 207 1.08E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS19595 7f82e590abb101e21180d16321152815 209 PANTHER PTHR10794 59 209 4.9E-21 T 22-04-2016 RPIC12D_RS19595 7f82e590abb101e21180d16321152815 209 Gene3D G3DSA:3.40.50.1820 99 209 4.1E-14 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS05180 0cebc4e92d690aa4010634c2d535dae6 303 Gene3D G3DSA:1.10.10.10 3 80 5.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS05180 0cebc4e92d690aa4010634c2d535dae6 303 SUPERFAMILY SSF53850 90 297 1.39E-44 T 22-04-2016 RPIC12D_RS05180 0cebc4e92d690aa4010634c2d535dae6 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS05180 0cebc4e92d690aa4010634c2d535dae6 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS05180 0cebc4e92d690aa4010634c2d535dae6 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS05180 0cebc4e92d690aa4010634c2d535dae6 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.8E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS05180 0cebc4e92d690aa4010634c2d535dae6 303 Gene3D G3DSA:3.40.190.10 81 162 1.8E-7 T 22-04-2016 RPIC12D_RS05180 0cebc4e92d690aa4010634c2d535dae6 303 Gene3D G3DSA:3.40.190.10 163 262 7.8E-20 T 22-04-2016 RPIC12D_RS05180 0cebc4e92d690aa4010634c2d535dae6 303 SUPERFAMILY SSF46785 4 85 2.22E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS05180 0cebc4e92d690aa4010634c2d535dae6 303 Pfam PF03466 LysR substrate binding domain 88 293 5.1E-40 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS05180 0cebc4e92d690aa4010634c2d535dae6 303 PANTHER PTHR30537 1 294 1.2E-134 T 22-04-2016 RPIC12D_RS05180 0cebc4e92d690aa4010634c2d535dae6 303 PANTHER PTHR30537:SF11 1 294 1.2E-134 T 22-04-2016 RPIC12D_RS06660 3fbba50e0677da770cf062941b2d6175 172 PANTHER PTHR21028:SF2 1 172 3.0E-42 T 22-04-2016 RPIC12D_RS06660 3fbba50e0677da770cf062941b2d6175 172 SUPERFAMILY SSF55154 3 167 8.67E-33 T 22-04-2016 IPR033469 CYTH-like domain RPIC12D_RS06660 3fbba50e0677da770cf062941b2d6175 172 PANTHER PTHR21028 1 172 3.0E-42 T 22-04-2016 RPIC12D_RS06660 3fbba50e0677da770cf062941b2d6175 172 Pfam PF01928 CYTH domain 3 158 2.6E-17 T 22-04-2016 IPR023577 CYTH domain RPIC12D_RS06660 3fbba50e0677da770cf062941b2d6175 172 Gene3D G3DSA:2.40.320.10 3 168 6.7E-36 T 22-04-2016 IPR023577 CYTH domain RPIC12D_RS06660 3fbba50e0677da770cf062941b2d6175 172 SMART SM01118 2 169 5.4E-11 T 22-04-2016 IPR023577 CYTH domain RPIC12D_RS09745 72adf4ca1f746c05a4f3d88eae8d98d4 469 PANTHER PTHR11119:SF3 15 453 8.2E-117 T 22-04-2016 RPIC12D_RS09745 72adf4ca1f746c05a4f3d88eae8d98d4 469 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 22 446 1.5E-121 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 RPIC12D_RS09745 72adf4ca1f746c05a4f3d88eae8d98d4 469 TIGRFAM TIGR03173 pbuX: xanthine permease 26 448 3.1E-162 T 22-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 RPIC12D_RS09745 72adf4ca1f746c05a4f3d88eae8d98d4 469 Pfam PF00860 Permease family 23 416 1.1E-102 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC12D_RS09745 72adf4ca1f746c05a4f3d88eae8d98d4 469 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 363 383 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 RPIC12D_RS09745 72adf4ca1f746c05a4f3d88eae8d98d4 469 PANTHER PTHR11119 15 453 8.2E-117 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC12D_RS02815 f4ccd7acf188ed3c29f6d35a0e83d3f8 518 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 366 385 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal RPIC12D_RS02815 f4ccd7acf188ed3c29f6d35a0e83d3f8 518 Gene3D G3DSA:1.25.40.80 165 302 3.2E-28 T 22-04-2016 RPIC12D_RS02815 f4ccd7acf188ed3c29f6d35a0e83d3f8 518 PRINTS PR00147 DNA photolyase signature 160 176 4.6E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RPIC12D_RS02815 f4ccd7acf188ed3c29f6d35a0e83d3f8 518 PRINTS PR00147 DNA photolyase signature 366 384 4.6E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RPIC12D_RS02815 f4ccd7acf188ed3c29f6d35a0e83d3f8 518 PRINTS PR00147 DNA photolyase signature 405 419 4.6E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RPIC12D_RS02815 f4ccd7acf188ed3c29f6d35a0e83d3f8 518 PRINTS PR00147 DNA photolyase signature 346 362 4.6E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RPIC12D_RS02815 f4ccd7acf188ed3c29f6d35a0e83d3f8 518 Pfam PF00875 DNA photolyase 21 180 7.3E-47 T 22-04-2016 IPR006050 DNA photolyase, N-terminal RPIC12D_RS02815 f4ccd7acf188ed3c29f6d35a0e83d3f8 518 SUPERFAMILY SSF48173 219 499 4.45E-102 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain RPIC12D_RS02815 f4ccd7acf188ed3c29f6d35a0e83d3f8 518 SUPERFAMILY SSF52425 19 199 8.5E-52 T 22-04-2016 IPR006050 DNA photolyase, N-terminal RPIC12D_RS02815 f4ccd7acf188ed3c29f6d35a0e83d3f8 518 Pfam PF03441 FAD binding domain of DNA photolyase 293 495 1.3E-79 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain RPIC12D_RS02815 f4ccd7acf188ed3c29f6d35a0e83d3f8 518 Gene3D G3DSA:3.40.50.620 19 164 4.0E-47 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS02815 f4ccd7acf188ed3c29f6d35a0e83d3f8 518 PANTHER PTHR11455:SF18 21 496 7.0E-175 T 22-04-2016 RPIC12D_RS02815 f4ccd7acf188ed3c29f6d35a0e83d3f8 518 PANTHER PTHR11455 21 496 7.0E-175 T 22-04-2016 RPIC12D_RS02815 f4ccd7acf188ed3c29f6d35a0e83d3f8 518 Gene3D G3DSA:1.10.579.10 303 497 9.4E-75 T 22-04-2016 RPIC12D_RS08665 e7d2d338474b895c63fd3ebf9bcf787a 265 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 1 254 3.7E-95 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 RPIC12D_RS08665 e7d2d338474b895c63fd3ebf9bcf787a 265 PANTHER PTHR20941 1 260 5.4E-111 T 22-04-2016 RPIC12D_RS08665 e7d2d338474b895c63fd3ebf9bcf787a 265 Gene3D G3DSA:3.20.20.20 1 257 2.4E-106 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RPIC12D_RS08665 e7d2d338474b895c63fd3ebf9bcf787a 265 SUPERFAMILY SSF51717 1 257 4.19E-95 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 RPIC12D_RS08665 e7d2d338474b895c63fd3ebf9bcf787a 265 Pfam PF00809 Pterin binding enzyme 1 240 1.3E-83 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RPIC12D_RS08665 e7d2d338474b895c63fd3ebf9bcf787a 265 PANTHER PTHR20941:SF1 1 260 5.4E-111 T 22-04-2016 RPIC12D_RS08665 e7d2d338474b895c63fd3ebf9bcf787a 265 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 34 47 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RPIC12D_RS16890 c13b6136b64b51febc221220677ce5a5 99 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 94 8.3E-17 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RPIC12D_RS16890 c13b6136b64b51febc221220677ce5a5 99 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 99 1.3E-32 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RPIC12D_RS16890 c13b6136b64b51febc221220677ce5a5 99 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 99 21.29 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RPIC12D_RS16890 c13b6136b64b51febc221220677ce5a5 99 PANTHER PTHR15004 1 99 1.2E-24 T 22-04-2016 RPIC12D_RS16890 c13b6136b64b51febc221220677ce5a5 99 SUPERFAMILY SSF141000 5 97 7.72E-25 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RPIC12D_RS16890 c13b6136b64b51febc221220677ce5a5 99 PANTHER PTHR15004:SF0 1 99 1.2E-24 T 22-04-2016 RPIC12D_RS04860 9db3ee91be57a55268bf30188bcea3b7 219 Gene3D G3DSA:3.40.50.1000 77 217 5.6E-42 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS04860 9db3ee91be57a55268bf30188bcea3b7 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 185 1.1E-33 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS04860 9db3ee91be57a55268bf30188bcea3b7 219 PANTHER PTHR18901 5 215 6.8E-48 T 22-04-2016 RPIC12D_RS04860 9db3ee91be57a55268bf30188bcea3b7 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 185 1.3E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS04860 9db3ee91be57a55268bf30188bcea3b7 219 PANTHER PTHR18901:SF40 5 215 6.8E-48 T 22-04-2016 RPIC12D_RS04860 9db3ee91be57a55268bf30188bcea3b7 219 SUPERFAMILY SSF56784 5 215 3.66E-57 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS04860 9db3ee91be57a55268bf30188bcea3b7 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 93 180 1.1E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS04860 9db3ee91be57a55268bf30188bcea3b7 219 Gene3D G3DSA:1.10.150.240 20 76 7.6E-8 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RPIC12D_RS13605 82e3198e4018b608f76604c6b7dfbce9 410 Gene3D G3DSA:3.90.640.10 234 296 9.2E-20 T 22-04-2016 RPIC12D_RS13605 82e3198e4018b608f76604c6b7dfbce9 410 PANTHER PTHR32432:SF4 1 406 1.2E-156 T 22-04-2016 RPIC12D_RS13605 82e3198e4018b608f76604c6b7dfbce9 410 Pfam PF14450 Cell division protein FtsA 10 193 3.6E-12 T 22-04-2016 RPIC12D_RS13605 82e3198e4018b608f76604c6b7dfbce9 410 Pfam PF14450 Cell division protein FtsA 206 373 3.9E-26 T 22-04-2016 RPIC12D_RS13605 82e3198e4018b608f76604c6b7dfbce9 410 SMART SM00842 9 195 1.3E-106 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RPIC12D_RS13605 82e3198e4018b608f76604c6b7dfbce9 410 Gene3D G3DSA:3.30.420.40 297 351 2.4E-33 T 22-04-2016 RPIC12D_RS13605 82e3198e4018b608f76604c6b7dfbce9 410 Gene3D G3DSA:3.30.420.40 209 233 2.4E-33 T 22-04-2016 RPIC12D_RS13605 82e3198e4018b608f76604c6b7dfbce9 410 Gene3D G3DSA:3.30.420.40 157 208 5.9E-25 T 22-04-2016 RPIC12D_RS13605 82e3198e4018b608f76604c6b7dfbce9 410 Gene3D G3DSA:3.30.420.40 3 82 5.9E-25 T 22-04-2016 RPIC12D_RS13605 82e3198e4018b608f76604c6b7dfbce9 410 Pfam PF02491 SHS2 domain inserted in FTSA 84 161 2.2E-32 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RPIC12D_RS13605 82e3198e4018b608f76604c6b7dfbce9 410 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 410 31.334 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 RPIC12D_RS13605 82e3198e4018b608f76604c6b7dfbce9 410 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 376 1.4E-147 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 RPIC12D_RS13605 82e3198e4018b608f76604c6b7dfbce9 410 SUPERFAMILY SSF53067 7 196 4.61E-63 T 22-04-2016 RPIC12D_RS13605 82e3198e4018b608f76604c6b7dfbce9 410 PIRSF PIRSF003101 1 410 1.7E-151 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 RPIC12D_RS13605 82e3198e4018b608f76604c6b7dfbce9 410 SUPERFAMILY SSF53067 197 375 5.35E-49 T 22-04-2016 RPIC12D_RS13605 82e3198e4018b608f76604c6b7dfbce9 410 PANTHER PTHR32432 1 406 1.2E-156 T 22-04-2016 RPIC12D_RS13605 82e3198e4018b608f76604c6b7dfbce9 410 Gene3D G3DSA:3.30.1490.110 85 156 3.7E-18 T 22-04-2016 RPIC12D_RS08175 e1b25fc0e278862ff2425eafa4d153d2 268 Gene3D G3DSA:3.20.20.60 4 254 1.3E-78 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS08175 e1b25fc0e278862ff2425eafa4d153d2 268 PANTHER PTHR30502 1 265 7.5E-95 T 22-04-2016 RPIC12D_RS08175 e1b25fc0e278862ff2425eafa4d153d2 268 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 243 1.6E-56 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 RPIC12D_RS08175 e1b25fc0e278862ff2425eafa4d153d2 268 PANTHER PTHR30502:SF0 1 265 7.5E-95 T 22-04-2016 RPIC12D_RS08175 e1b25fc0e278862ff2425eafa4d153d2 268 SUPERFAMILY SSF51621 2 254 7.68E-80 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS08175 e1b25fc0e278862ff2425eafa4d153d2 268 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 6 254 1.5E-122 T 22-04-2016 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52|UniPathway: UPA00208 RPIC12D_RS10130 d410140cea976f05c6c9caa0b62e1aa5 282 SMART SM00450 118 219 1.5E-9 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS10130 d410140cea976f05c6c9caa0b62e1aa5 282 SUPERFAMILY SSF52821 96 241 1.31E-24 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS10130 d410140cea976f05c6c9caa0b62e1aa5 282 PANTHER PTHR22778 2 263 7.4E-69 T 22-04-2016 RPIC12D_RS10130 d410140cea976f05c6c9caa0b62e1aa5 282 Gene3D G3DSA:3.40.250.10 101 229 1.3E-27 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS10130 d410140cea976f05c6c9caa0b62e1aa5 282 PANTHER PTHR22778:SF21 2 263 7.4E-69 T 22-04-2016 RPIC12D_RS10130 d410140cea976f05c6c9caa0b62e1aa5 282 Pfam PF00581 Rhodanese-like domain 120 213 9.7E-5 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS10130 d410140cea976f05c6c9caa0b62e1aa5 282 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 257 37.903 T 22-04-2016 IPR020936 Uncharacterised protein family UPF0176 RPIC12D_RS12170 761043dcd8feb4641e8d7df35d758dfc 635 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 9 631 28.414 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 RPIC12D_RS12170 761043dcd8feb4641e8d7df35d758dfc 635 SMART SM01340 212 330 5.6E-58 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RPIC12D_RS12170 761043dcd8feb4641e8d7df35d758dfc 635 SUPERFAMILY SSF55874 9 206 6.94E-53 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS12170 761043dcd8feb4641e8d7df35d758dfc 635 Pfam PF08676 MutL C terminal dimerisation domain 444 591 2.7E-47 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 RPIC12D_RS12170 761043dcd8feb4641e8d7df35d758dfc 635 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 132 2.0E-11 T 22-04-2016 RPIC12D_RS12170 761043dcd8feb4641e8d7df35d758dfc 635 SUPERFAMILY SSF54211 195 330 3.3E-35 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS12170 761043dcd8feb4641e8d7df35d758dfc 635 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 101 107 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site RPIC12D_RS12170 761043dcd8feb4641e8d7df35d758dfc 635 SMART SM00853 448 591 6.8E-54 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 RPIC12D_RS12170 761043dcd8feb4641e8d7df35d758dfc 635 Gene3D G3DSA:3.30.230.10 217 329 5.2E-37 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC12D_RS12170 761043dcd8feb4641e8d7df35d758dfc 635 Gene3D G3DSA:3.30.565.10 10 210 3.2E-70 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS12170 761043dcd8feb4641e8d7df35d758dfc 635 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 2.2E-37 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RPIC12D_RS12170 761043dcd8feb4641e8d7df35d758dfc 635 SUPERFAMILY SSF118116 443 633 3.27E-59 T 22-04-2016 RPIC12D_RS12170 761043dcd8feb4641e8d7df35d758dfc 635 PANTHER PTHR10073 11 631 6.1E-162 T 22-04-2016 RPIC12D_RS12170 761043dcd8feb4641e8d7df35d758dfc 635 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 10 310 2.1E-91 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 ProSitePatterns PS00163 Fumarate lyases signature. 283 292 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 Gene3D G3DSA:1.20.200.10 115 381 1.0E-110 T 22-04-2016 RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 SUPERFAMILY SSF48557 12 469 2.2E-147 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 Pfam PF14698 Argininosuccinate lyase C-terminal 371 445 1.4E-22 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 Gene3D G3DSA:1.10.275.10 11 114 3.8E-37 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 Hamap MF_00006 Argininosuccinate lyase [argH]. 10 467 43.29 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 Pfam PF00206 Lyase 15 308 1.3E-76 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 PANTHER PTHR11444:SF3 12 469 2.8E-218 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 PRINTS PR00145 Argininosuccinate lyase family signature 109 131 1.2E-68 T 22-04-2016 RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 PRINTS PR00145 Argininosuccinate lyase family signature 283 299 1.2E-68 T 22-04-2016 RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 PRINTS PR00145 Argininosuccinate lyase family signature 318 337 1.2E-68 T 22-04-2016 RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 PRINTS PR00145 Argininosuccinate lyase family signature 239 263 1.2E-68 T 22-04-2016 RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 PRINTS PR00145 Argininosuccinate lyase family signature 150 170 1.2E-68 T 22-04-2016 RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 PRINTS PR00145 Argininosuccinate lyase family signature 201 217 1.2E-68 T 22-04-2016 RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 TIGRFAM TIGR00838 argH: argininosuccinate lyase 12 469 1.2E-183 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 Gene3D G3DSA:1.10.40.30 382 445 4.5E-28 T 22-04-2016 RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 PRINTS PR00149 Fumarate lyase superfamily signature 110 128 7.3E-29 T 22-04-2016 IPR000362 Fumarate lyase family RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 PRINTS PR00149 Fumarate lyase superfamily signature 283 299 7.3E-29 T 22-04-2016 IPR000362 Fumarate lyase family RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 PRINTS PR00149 Fumarate lyase superfamily signature 155 173 7.3E-29 T 22-04-2016 IPR000362 Fumarate lyase family RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 PRINTS PR00149 Fumarate lyase superfamily signature 239 266 7.3E-29 T 22-04-2016 IPR000362 Fumarate lyase family RPIC12D_RS10925 f5ebcf9732b25f2bf8ba5e40a554a403 471 PANTHER PTHR11444 12 469 2.8E-218 T 22-04-2016 IPR000362 Fumarate lyase family RPIC12D_RS16650 d12beb26a4a0d5b7aee277e28e15de60 384 Gene3D G3DSA:3.20.20.70 164 380 2.2E-54 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS16650 d12beb26a4a0d5b7aee277e28e15de60 384 PANTHER PTHR20857 163 374 2.5E-42 T 22-04-2016 RPIC12D_RS16650 d12beb26a4a0d5b7aee277e28e15de60 384 PANTHER PTHR20857:SF15 163 374 2.5E-42 T 22-04-2016 RPIC12D_RS16650 d12beb26a4a0d5b7aee277e28e15de60 384 Pfam PF02581 Thiamine monophosphate synthase/TENI 182 361 3.6E-47 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RPIC12D_RS16650 d12beb26a4a0d5b7aee277e28e15de60 384 SUPERFAMILY SSF51391 164 375 1.44E-49 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RPIC12D_RS09800 7ca3fde3fde780d95be153d8c18574e2 344 Gene3D G3DSA:3.40.50.1820 66 336 4.6E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS09800 7ca3fde3fde780d95be153d8c18574e2 344 TIGRFAM TIGR01840 esterase_phb: esterase, PHB depolymerase family 73 265 2.1E-38 T 22-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 RPIC12D_RS09800 7ca3fde3fde780d95be153d8c18574e2 344 PANTHER PTHR11731 71 269 1.4E-14 T 22-04-2016 RPIC12D_RS09800 7ca3fde3fde780d95be153d8c18574e2 344 Pfam PF10503 Esterase PHB depolymerase 71 280 9.8E-69 T 22-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 RPIC12D_RS09800 7ca3fde3fde780d95be153d8c18574e2 344 SUPERFAMILY SSF53474 70 278 5.45E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS12750 0fab3f1bb65385ca825f4d783e74ac74 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3 340 2.7E-131 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC12D_RS12750 0fab3f1bb65385ca825f4d783e74ac74 356 SUPERFAMILY SSF111337 3 340 9.02E-134 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC12D_RS12750 0fab3f1bb65385ca825f4d783e74ac74 356 Gene3D G3DSA:3.40.1780.10 178 340 6.5E-102 T 22-04-2016 RPIC12D_RS12750 0fab3f1bb65385ca825f4d783e74ac74 356 Gene3D G3DSA:3.40.1780.10 3 65 6.5E-102 T 22-04-2016 RPIC12D_RS12750 0fab3f1bb65385ca825f4d783e74ac74 356 PANTHER PTHR30307:SF0 4 347 3.4E-168 T 22-04-2016 RPIC12D_RS12750 0fab3f1bb65385ca825f4d783e74ac74 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 2 341 46.518 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC12D_RS12750 0fab3f1bb65385ca825f4d783e74ac74 356 Gene3D G3DSA:2.40.10.240 67 135 5.5E-11 T 22-04-2016 RPIC12D_RS12750 0fab3f1bb65385ca825f4d783e74ac74 356 PANTHER PTHR30307 4 347 3.4E-168 T 22-04-2016 RPIC12D_RS12750 0fab3f1bb65385ca825f4d783e74ac74 356 Pfam PF02547 Queuosine biosynthesis protein 4 340 3.1E-133 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC12D_RS10485 05cb9508ece79d08520865997c8c6157 438 SUPERFAMILY SSF56176 345 427 2.54E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS10485 05cb9508ece79d08520865997c8c6157 438 PANTHER PTHR22777 4 425 1.3E-167 T 22-04-2016 RPIC12D_RS10485 05cb9508ece79d08520865997c8c6157 438 Pfam PF00571 CBS domain 285 334 8.2E-6 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS10485 05cb9508ece79d08520865997c8c6157 438 Gene3D G3DSA:3.10.580.10 197 335 1.9E-15 T 22-04-2016 RPIC12D_RS10485 05cb9508ece79d08520865997c8c6157 438 Pfam PF01595 Domain of unknown function DUF21 5 195 1.1E-42 T 22-04-2016 IPR002550 Domain of unknown function DUF21 RPIC12D_RS10485 05cb9508ece79d08520865997c8c6157 438 Pfam PF03471 Transporter associated domain 348 425 1.2E-19 T 22-04-2016 IPR005170 Transporter-associated domain RPIC12D_RS10485 05cb9508ece79d08520865997c8c6157 438 SMART SM01091 347 427 2.4E-26 T 22-04-2016 IPR005170 Transporter-associated domain RPIC12D_RS10485 05cb9508ece79d08520865997c8c6157 438 PANTHER PTHR22777:SF16 4 425 1.3E-167 T 22-04-2016 RPIC12D_RS10485 05cb9508ece79d08520865997c8c6157 438 Gene3D G3DSA:3.30.465.10 342 425 2.4E-24 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC12D_RS10485 05cb9508ece79d08520865997c8c6157 438 SUPERFAMILY SSF54631 198 337 4.25E-22 T 22-04-2016 RPIC12D_RS08945 540eb7501a21f8b76a03f3a4a7fdec97 660 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 27 658 2.9E-298 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 RPIC12D_RS08945 540eb7501a21f8b76a03f3a4a7fdec97 660 SUPERFAMILY SSF56801 15 655 4.19E-175 T 22-04-2016 RPIC12D_RS08945 540eb7501a21f8b76a03f3a4a7fdec97 660 ProSitePatterns PS00455 Putative AMP-binding domain signature. 267 278 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC12D_RS08945 540eb7501a21f8b76a03f3a4a7fdec97 660 PANTHER PTHR24095 14 658 1.0E-270 T 22-04-2016 RPIC12D_RS08945 540eb7501a21f8b76a03f3a4a7fdec97 660 Pfam PF13193 AMP-binding enzyme C-terminal domain 544 625 1.5E-27 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC12D_RS08945 540eb7501a21f8b76a03f3a4a7fdec97 660 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 9 660 51.716 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 RPIC12D_RS08945 540eb7501a21f8b76a03f3a4a7fdec97 660 Gene3D G3DSA:3.40.50.980 273 435 3.2E-29 T 22-04-2016 RPIC12D_RS08945 540eb7501a21f8b76a03f3a4a7fdec97 660 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 32 87 1.2E-21 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 RPIC12D_RS08945 540eb7501a21f8b76a03f3a4a7fdec97 660 Gene3D G3DSA:2.30.38.10 450 529 8.4E-8 T 22-04-2016 RPIC12D_RS08945 540eb7501a21f8b76a03f3a4a7fdec97 660 Gene3D G3DSA:3.30.300.30 530 639 5.7E-27 T 22-04-2016 RPIC12D_RS08945 540eb7501a21f8b76a03f3a4a7fdec97 660 Gene3D G3DSA:3.40.50.980 85 272 1.8E-41 T 22-04-2016 RPIC12D_RS08945 540eb7501a21f8b76a03f3a4a7fdec97 660 Pfam PF00501 AMP-binding enzyme 95 535 2.5E-94 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC12D_RS01610 d9633d3b3b0af1185c5dd5b556cb7990 192 SUPERFAMILY SSF46689 2 80 1.18E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS01610 d9633d3b3b0af1185c5dd5b556cb7990 192 Gene3D G3DSA:1.10.357.10 2 182 2.1E-31 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC12D_RS01610 d9633d3b3b0af1185c5dd5b556cb7990 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 55 1.3E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS01610 d9633d3b3b0af1185c5dd5b556cb7990 192 PANTHER PTHR30055:SF47 5 190 4.7E-22 T 22-04-2016 RPIC12D_RS01610 d9633d3b3b0af1185c5dd5b556cb7990 192 SUPERFAMILY SSF48498 76 182 1.63E-17 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC12D_RS01610 d9633d3b3b0af1185c5dd5b556cb7990 192 PANTHER PTHR30055 5 190 4.7E-22 T 22-04-2016 RPIC12D_RS01610 d9633d3b3b0af1185c5dd5b556cb7990 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 4.3E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS01610 d9633d3b3b0af1185c5dd5b556cb7990 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 4.3E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS12790 f0a759f3d4e33898d58e3c7beb7eb721 457 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 13 455 1.0E-125 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 RPIC12D_RS12790 f0a759f3d4e33898d58e3c7beb7eb721 457 Gene3D G3DSA:1.10.40.30 391 446 1.4E-30 T 22-04-2016 RPIC12D_RS12790 f0a759f3d4e33898d58e3c7beb7eb721 457 PANTHER PTHR11444 5 456 3.8E-267 T 22-04-2016 IPR000362 Fumarate lyase family RPIC12D_RS12790 f0a759f3d4e33898d58e3c7beb7eb721 457 PANTHER PTHR11444:SF17 5 456 3.8E-267 T 22-04-2016 RPIC12D_RS12790 f0a759f3d4e33898d58e3c7beb7eb721 457 Gene3D G3DSA:1.10.275.10 3 119 1.3E-45 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal RPIC12D_RS12790 f0a759f3d4e33898d58e3c7beb7eb721 457 SUPERFAMILY SSF48557 4 448 1.88E-105 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 RPIC12D_RS12790 f0a759f3d4e33898d58e3c7beb7eb721 457 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 1.0E-49 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 RPIC12D_RS12790 f0a759f3d4e33898d58e3c7beb7eb721 457 Pfam PF00206 Lyase 15 313 5.8E-60 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal RPIC12D_RS12790 f0a759f3d4e33898d58e3c7beb7eb721 457 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 8.5E-19 T 22-04-2016 IPR000362 Fumarate lyase family RPIC12D_RS12790 f0a759f3d4e33898d58e3c7beb7eb721 457 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 8.5E-19 T 22-04-2016 IPR000362 Fumarate lyase family RPIC12D_RS12790 f0a759f3d4e33898d58e3c7beb7eb721 457 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 8.5E-19 T 22-04-2016 IPR000362 Fumarate lyase family RPIC12D_RS12790 f0a759f3d4e33898d58e3c7beb7eb721 457 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 8.5E-19 T 22-04-2016 IPR000362 Fumarate lyase family RPIC12D_RS12790 f0a759f3d4e33898d58e3c7beb7eb721 457 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RPIC12D_RS12790 f0a759f3d4e33898d58e3c7beb7eb721 457 Gene3D G3DSA:1.20.200.10 120 390 3.5E-88 T 22-04-2016 RPIC12D_RS06725 3b2c09c5087477ba8fd924270fe8c090 627 PANTHER PTHR21600 251 621 1.5E-62 T 22-04-2016 RPIC12D_RS06725 3b2c09c5087477ba8fd924270fe8c090 627 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 480 621 2.9E-32 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RPIC12D_RS06725 3b2c09c5087477ba8fd924270fe8c090 627 Pfam PF01479 S4 domain 375 421 1.6E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS06725 3b2c09c5087477ba8fd924270fe8c090 627 PANTHER PTHR21600:SF25 251 621 1.5E-62 T 22-04-2016 RPIC12D_RS06725 3b2c09c5087477ba8fd924270fe8c090 627 Pfam PF00849 RNA pseudouridylate synthase 437 592 1.6E-11 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS06725 3b2c09c5087477ba8fd924270fe8c090 627 SMART SM00363 375 432 5.9E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS06725 3b2c09c5087477ba8fd924270fe8c090 627 Gene3D G3DSA:3.10.290.10 375 431 7.6E-16 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS06725 3b2c09c5087477ba8fd924270fe8c090 627 SUPERFAMILY SSF55120 435 625 1.92E-32 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS06725 3b2c09c5087477ba8fd924270fe8c090 627 SUPERFAMILY SSF55174 375 467 9.16E-16 T 22-04-2016 RPIC12D_RS14825 1ebeacf17a54722498052b55193aee37 1594 Gene3D G3DSA:1.50.10.20 1080 1172 1.2E-9 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RPIC12D_RS14825 1ebeacf17a54722498052b55193aee37 1594 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 671 816 7.8E-11 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RPIC12D_RS14825 1ebeacf17a54722498052b55193aee37 1594 SMART SM01359 670 816 1.1E-29 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RPIC12D_RS14825 1ebeacf17a54722498052b55193aee37 1594 Pfam PF01835 MG2 domain 345 441 1.1E-16 T 22-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 RPIC12D_RS14825 1ebeacf17a54722498052b55193aee37 1594 Pfam PF00207 Alpha-2-macroglobulin family 883 975 2.3E-21 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 RPIC12D_RS14825 1ebeacf17a54722498052b55193aee37 1594 SMART SM01360 883 977 5.1E-20 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 RPIC12D_RS14825 1ebeacf17a54722498052b55193aee37 1594 SUPERFAMILY SSF48239 1080 1175 4.45E-14 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RPIC12D_RS14825 1ebeacf17a54722498052b55193aee37 1594 PANTHER PTHR11412 885 918 1.8E-31 T 22-04-2016 RPIC12D_RS14825 1ebeacf17a54722498052b55193aee37 1594 PANTHER PTHR11412 340 625 1.8E-31 T 22-04-2016 RPIC12D_RS14825 1ebeacf17a54722498052b55193aee37 1594 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1080 1105 9.4E-6 T 22-04-2016 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming RPIC12D_RS07150 05709110fe1ff9d77f027db3b2cb93fd 96 Pfam PF02426 Muconolactone delta-isomerase 1 90 2.5E-43 T 22-04-2016 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 RPIC12D_RS07150 05709110fe1ff9d77f027db3b2cb93fd 96 SUPERFAMILY SSF54909 1 95 4.29E-41 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC12D_RS07150 05709110fe1ff9d77f027db3b2cb93fd 96 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 2.0E-23 T 22-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 RPIC12D_RS07150 05709110fe1ff9d77f027db3b2cb93fd 96 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 9.7E-49 T 22-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 RPIC12D_RS07150 05709110fe1ff9d77f027db3b2cb93fd 96 PIRSF PIRSF001486 1 94 9.4E-50 T 22-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 RPIC12D_RS12165 7d9576e7cad37c3e59e44a9958a3e4cb 215 PANTHER PTHR30353 1 214 1.1E-65 T 22-04-2016 IPR032818 DedA family RPIC12D_RS12165 7d9576e7cad37c3e59e44a9958a3e4cb 215 PANTHER PTHR30353:SF0 1 214 1.1E-65 T 22-04-2016 RPIC12D_RS12165 7d9576e7cad37c3e59e44a9958a3e4cb 215 Pfam PF09335 SNARE associated Golgi protein 45 169 1.0E-22 T 22-04-2016 IPR032816 SNARE associated Golgi protein RPIC12D_RS13710 3455cf481ea5f4eb28f4205867914d0b 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC12D_RS13710 3455cf481ea5f4eb28f4205867914d0b 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 48 1.5E-13 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC12D_RS13710 3455cf481ea5f4eb28f4205867914d0b 331 Gene3D G3DSA:3.40.50.2300 54 171 2.6E-43 T 22-04-2016 RPIC12D_RS13710 3455cf481ea5f4eb28f4205867914d0b 331 Gene3D G3DSA:3.40.50.2300 172 306 3.3E-37 T 22-04-2016 RPIC12D_RS13710 3455cf481ea5f4eb28f4205867914d0b 331 SUPERFAMILY SSF53822 60 316 1.88E-65 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS13710 3455cf481ea5f4eb28f4205867914d0b 331 SMART SM00354 2 71 3.0E-25 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC12D_RS13710 3455cf481ea5f4eb28f4205867914d0b 331 SUPERFAMILY SSF47413 2 57 1.22E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS13710 3455cf481ea5f4eb28f4205867914d0b 331 Gene3D G3DSA:1.10.260.40 3 53 1.7E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS13710 3455cf481ea5f4eb28f4205867914d0b 331 PANTHER PTHR30146:SF4 1 326 1.0E-98 T 22-04-2016 RPIC12D_RS13710 3455cf481ea5f4eb28f4205867914d0b 331 Pfam PF13377 Periplasmic binding protein-like domain 167 326 3.8E-34 T 22-04-2016 RPIC12D_RS13710 3455cf481ea5f4eb28f4205867914d0b 331 PANTHER PTHR30146 1 326 1.0E-98 T 22-04-2016 RPIC12D_RS13060 b54f977e5ea5c7737ba82fdc471cc6fa 271 PANTHER PTHR19278 1 225 2.0E-65 T 22-04-2016 RPIC12D_RS13060 b54f977e5ea5c7737ba82fdc471cc6fa 271 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 90 103 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS13060 b54f977e5ea5c7737ba82fdc471cc6fa 271 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 2 268 36.56 T 22-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS13060 b54f977e5ea5c7737ba82fdc471cc6fa 271 Gene3D G3DSA:3.20.20.70 5 263 8.3E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS13060 b54f977e5ea5c7737ba82fdc471cc6fa 271 SUPERFAMILY SSF51366 3 267 7.07E-80 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RPIC12D_RS13060 b54f977e5ea5c7737ba82fdc471cc6fa 271 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 17 248 8.9E-36 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS13060 b54f977e5ea5c7737ba82fdc471cc6fa 271 SMART SM00934 17 255 1.5E-50 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS13060 b54f977e5ea5c7737ba82fdc471cc6fa 271 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 3 255 1.2E-76 T 22-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS13060 b54f977e5ea5c7737ba82fdc471cc6fa 271 PANTHER PTHR19278:SF1 1 225 2.0E-65 T 22-04-2016 RPIC12D_RS06890 33eb65bc5c603fa7d5a5a3813c3ce751 539 SUPERFAMILY SSF52402 192 414 4.19E-59 T 22-04-2016 RPIC12D_RS06890 33eb65bc5c603fa7d5a5a3813c3ce751 539 Gene3D G3DSA:3.30.300.10 396 539 1.2E-49 T 22-04-2016 RPIC12D_RS06890 33eb65bc5c603fa7d5a5a3813c3ce751 539 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 539 54.175 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RPIC12D_RS06890 33eb65bc5c603fa7d5a5a3813c3ce751 539 SUPERFAMILY SSF54810 400 539 2.48E-43 T 22-04-2016 RPIC12D_RS06890 33eb65bc5c603fa7d5a5a3813c3ce751 539 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 199 5.7E-69 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RPIC12D_RS06890 33eb65bc5c603fa7d5a5a3813c3ce751 539 Pfam PF00958 GMP synthase C terminal domain 453 538 1.5E-39 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RPIC12D_RS06890 33eb65bc5c603fa7d5a5a3813c3ce751 539 SUPERFAMILY SSF52317 1 232 8.25E-56 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS06890 33eb65bc5c603fa7d5a5a3813c3ce751 539 Gene3D G3DSA:3.40.50.620 219 395 3.4E-59 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS06890 33eb65bc5c603fa7d5a5a3813c3ce751 539 Pfam PF00117 Glutamine amidotransferase class-I 7 195 2.7E-33 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RPIC12D_RS06890 33eb65bc5c603fa7d5a5a3813c3ce751 539 PANTHER PTHR11922 1 536 9.0E-271 T 22-04-2016 RPIC12D_RS06890 33eb65bc5c603fa7d5a5a3813c3ce751 539 Gene3D G3DSA:3.40.50.880 2 218 4.8E-57 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS06890 33eb65bc5c603fa7d5a5a3813c3ce751 539 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 208 539 6.5E-141 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RPIC12D_RS06890 33eb65bc5c603fa7d5a5a3813c3ce751 539 PANTHER PTHR11922:SF2 1 536 9.0E-271 T 22-04-2016 RPIC12D_RS06890 33eb65bc5c603fa7d5a5a3813c3ce751 539 Pfam PF02540 NAD synthase 209 249 6.0E-7 T 22-04-2016 IPR022310 NAD/GMP synthase RPIC12D_RS14545 7fb19080903d47f49ac164ef002eb23d 804 SUPERFAMILY SSF56601 438 755 3.18E-121 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS14545 7fb19080903d47f49ac164ef002eb23d 804 SUPERFAMILY SSF56601 231 253 3.18E-121 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS14545 7fb19080903d47f49ac164ef002eb23d 804 SUPERFAMILY SSF56601 282 333 3.18E-121 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS14545 7fb19080903d47f49ac164ef002eb23d 804 Pfam PF00912 Transglycosylase 77 249 1.3E-62 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RPIC12D_RS14545 7fb19080903d47f49ac164ef002eb23d 804 Gene3D G3DSA:2.40.50.140 367 437 2.8E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS14545 7fb19080903d47f49ac164ef002eb23d 804 Gene3D G3DSA:3.40.710.10 252 333 1.1E-132 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS14545 7fb19080903d47f49ac164ef002eb23d 804 Gene3D G3DSA:3.40.710.10 438 755 1.1E-132 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS14545 7fb19080903d47f49ac164ef002eb23d 804 PANTHER PTHR32282:SF5 437 745 1.3E-243 T 22-04-2016 RPIC12D_RS14545 7fb19080903d47f49ac164ef002eb23d 804 PANTHER PTHR32282:SF5 1 330 1.3E-243 T 22-04-2016 RPIC12D_RS14545 7fb19080903d47f49ac164ef002eb23d 804 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 86 728 7.2E-190 T 22-04-2016 RPIC12D_RS14545 7fb19080903d47f49ac164ef002eb23d 804 Pfam PF00905 Penicillin binding protein transpeptidase domain 447 696 8.8E-39 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RPIC12D_RS14545 7fb19080903d47f49ac164ef002eb23d 804 Gene3D G3DSA:1.10.3810.10 77 251 5.2E-74 T 22-04-2016 RPIC12D_RS14545 7fb19080903d47f49ac164ef002eb23d 804 PANTHER PTHR32282 437 745 1.3E-243 T 22-04-2016 RPIC12D_RS14545 7fb19080903d47f49ac164ef002eb23d 804 PANTHER PTHR32282 1 330 1.3E-243 T 22-04-2016 RPIC12D_RS14545 7fb19080903d47f49ac164ef002eb23d 804 Pfam PF17092 Penicillin-binding protein OB-like domain 336 441 9.7E-23 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 RPIC12D_RS14545 7fb19080903d47f49ac164ef002eb23d 804 SUPERFAMILY SSF53955 63 271 1.1E-74 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC12D_RS14955 38f88f077562426e2ea5b46abcff64e0 525 PANTHER PTHR11985 12 499 6.4E-168 T 22-04-2016 RPIC12D_RS14955 38f88f077562426e2ea5b46abcff64e0 525 Pfam PF01266 FAD dependent oxidoreductase 12 331 1.0E-52 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIC12D_RS14955 38f88f077562426e2ea5b46abcff64e0 525 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 362 372 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIC12D_RS14955 38f88f077562426e2ea5b46abcff64e0 525 PANTHER PTHR11985:SF1 12 499 6.4E-168 T 22-04-2016 RPIC12D_RS14955 38f88f077562426e2ea5b46abcff64e0 525 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 16 33 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIC12D_RS14955 38f88f077562426e2ea5b46abcff64e0 525 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 392 499 2.4E-12 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIC12D_RS14955 38f88f077562426e2ea5b46abcff64e0 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 24 34 1.7E-26 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIC12D_RS14955 38f88f077562426e2ea5b46abcff64e0 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 321 327 1.7E-26 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIC12D_RS14955 38f88f077562426e2ea5b46abcff64e0 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 11 23 1.7E-26 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIC12D_RS14955 38f88f077562426e2ea5b46abcff64e0 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 85 97 1.7E-26 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIC12D_RS14955 38f88f077562426e2ea5b46abcff64e0 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 40 52 1.7E-26 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIC12D_RS14955 38f88f077562426e2ea5b46abcff64e0 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 357 369 1.7E-26 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIC12D_RS14955 38f88f077562426e2ea5b46abcff64e0 525 SUPERFAMILY SSF51905 10 304 8.55E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS14955 38f88f077562426e2ea5b46abcff64e0 525 Gene3D G3DSA:3.50.50.60 9 250 3.3E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS14310 903c781a856adae8d4317d2ba6440091 248 Gene3D G3DSA:3.40.1390.30 1 107 2.9E-34 T 22-04-2016 RPIC12D_RS14310 903c781a856adae8d4317d2ba6440091 248 Gene3D G3DSA:3.40.1390.30 108 215 1.4E-28 T 22-04-2016 RPIC12D_RS14310 903c781a856adae8d4317d2ba6440091 248 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 2 247 7.7E-58 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RPIC12D_RS14310 903c781a856adae8d4317d2ba6440091 248 PANTHER PTHR13799 1 244 2.5E-71 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RPIC12D_RS14310 903c781a856adae8d4317d2ba6440091 248 SUPERFAMILY SSF102705 1 247 8.37E-77 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RPIC12D_RS14310 903c781a856adae8d4317d2ba6440091 248 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 9 236 1.5E-54 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RPIC12D_RS09845 e311933d3c66412605e379e252bf2af9 806 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 112 800 8.1E-223 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 RPIC12D_RS09845 e311933d3c66412605e379e252bf2af9 806 Pfam PF13328 HD domain 112 261 3.3E-52 T 22-04-2016 IPR003607 HD/PDEase domain RPIC12D_RS09845 e311933d3c66412605e379e252bf2af9 806 Pfam PF13291 ACT domain 723 801 5.3E-17 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RPIC12D_RS09845 e311933d3c66412605e379e252bf2af9 806 Gene3D G3DSA:3.10.20.30 474 534 6.5E-21 T 22-04-2016 IPR012675 Beta-grasp domain RPIC12D_RS09845 e311933d3c66412605e379e252bf2af9 806 SUPERFAMILY SSF81271 461 533 9.37E-22 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RPIC12D_RS09845 e311933d3c66412605e379e252bf2af9 806 Pfam PF04607 Region found in RelA / SpoT proteins 321 431 1.5E-33 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 RPIC12D_RS09845 e311933d3c66412605e379e252bf2af9 806 SUPERFAMILY SSF55021 725 800 9.92E-8 T 22-04-2016 RPIC12D_RS09845 e311933d3c66412605e379e252bf2af9 806 PANTHER PTHR21262 99 804 0.0 T 22-04-2016 RPIC12D_RS09845 e311933d3c66412605e379e252bf2af9 806 SUPERFAMILY SSF81301 278 451 1.29E-59 T 22-04-2016 RPIC12D_RS09845 e311933d3c66412605e379e252bf2af9 806 SMART SM00954 321 431 5.8E-60 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 RPIC12D_RS09845 e311933d3c66412605e379e252bf2af9 806 Gene3D G3DSA:3.30.460.10 280 411 2.6E-44 T 22-04-2016 RPIC12D_RS09845 e311933d3c66412605e379e252bf2af9 806 PANTHER PTHR21262:SF0 99 804 0.0 T 22-04-2016 RPIC12D_RS09845 e311933d3c66412605e379e252bf2af9 806 Pfam PF02824 TGS domain 474 533 9.5E-20 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 RPIC12D_RS09845 e311933d3c66412605e379e252bf2af9 806 SUPERFAMILY SSF109604 97 275 6.91E-72 T 22-04-2016 RPIC12D_RS09845 e311933d3c66412605e379e252bf2af9 806 SMART SM00471 127 239 3.8E-10 T 22-04-2016 IPR003607 HD/PDEase domain RPIC12D_RS09845 e311933d3c66412605e379e252bf2af9 806 Gene3D G3DSA:3.30.70.260 726 799 1.3E-8 T 22-04-2016 RPIC12D_RS02925 8333875ba1382de64a6e64768ce9dcd6 349 Gene3D G3DSA:3.90.1210.10 292 348 6.8E-18 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal RPIC12D_RS02925 8333875ba1382de64a6e64768ce9dcd6 349 SUPERFAMILY SSF51269 286 348 1.04E-16 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal RPIC12D_RS02925 8333875ba1382de64a6e64768ce9dcd6 349 PANTHER PTHR23416 3 301 1.3E-92 T 22-04-2016 RPIC12D_RS02925 8333875ba1382de64a6e64768ce9dcd6 349 Pfam PF03102 NeuB family 36 276 5.7E-87 T 22-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 RPIC12D_RS02925 8333875ba1382de64a6e64768ce9dcd6 349 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 16 343 2.7E-149 T 22-04-2016 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 RPIC12D_RS02925 8333875ba1382de64a6e64768ce9dcd6 349 SUPERFAMILY SSF51569 2 301 1.09E-88 T 22-04-2016 RPIC12D_RS02925 8333875ba1382de64a6e64768ce9dcd6 349 SMART SM00858 291 349 7.7E-7 T 22-04-2016 IPR013974 SAF domain RPIC12D_RS02925 8333875ba1382de64a6e64768ce9dcd6 349 Pfam PF08666 SAF domain 292 347 2.0E-7 T 22-04-2016 IPR013974 SAF domain RPIC12D_RS02925 8333875ba1382de64a6e64768ce9dcd6 349 Gene3D G3DSA:3.20.20.70 3 274 4.1E-105 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS02925 8333875ba1382de64a6e64768ce9dcd6 349 PANTHER PTHR23416:SF62 3 301 1.3E-92 T 22-04-2016 RPIC12D_RS06375 31071c04e395822d5c29ce0daa0d711e 126 TIGRFAM TIGR00494 crcB: protein CrcB 7 120 1.4E-26 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RPIC12D_RS06375 31071c04e395822d5c29ce0daa0d711e 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 118 1.8E-20 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RPIC12D_RS06375 31071c04e395822d5c29ce0daa0d711e 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 123 17.24 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RPIC12D_RS06375 31071c04e395822d5c29ce0daa0d711e 126 PANTHER PTHR28259 4 125 4.8E-32 T 22-04-2016 RPIC12D_RS16280 fd339fe889c2a6247e044ea0bbcfc694 457 PANTHER PTHR24220 16 299 7.7E-115 T 22-04-2016 RPIC12D_RS16280 fd339fe889c2a6247e044ea0bbcfc694 457 PANTHER PTHR24220 320 429 7.7E-115 T 22-04-2016 RPIC12D_RS16280 fd339fe889c2a6247e044ea0bbcfc694 457 Pfam PF09821 C-terminal AAA-associated domain 310 427 5.1E-36 T 22-04-2016 IPR018632 C-terminal AAA-associated domain RPIC12D_RS16280 fd339fe889c2a6247e044ea0bbcfc694 457 SMART SM00382 44 226 3.7E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS16280 fd339fe889c2a6247e044ea0bbcfc694 457 Gene3D G3DSA:3.40.50.300 6 233 7.2E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16280 fd339fe889c2a6247e044ea0bbcfc694 457 Pfam PF00005 ABC transporter 35 174 1.3E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS16280 fd339fe889c2a6247e044ea0bbcfc694 457 PANTHER PTHR24220:SF589 16 299 7.7E-115 T 22-04-2016 RPIC12D_RS16280 fd339fe889c2a6247e044ea0bbcfc694 457 PANTHER PTHR24220:SF589 320 429 7.7E-115 T 22-04-2016 RPIC12D_RS16280 fd339fe889c2a6247e044ea0bbcfc694 457 SUPERFAMILY SSF52540 15 254 2.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16280 fd339fe889c2a6247e044ea0bbcfc694 457 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS06880 d4b878cc1649edc214190836ea77e773 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 473 1.6E-162 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 RPIC12D_RS06880 d4b878cc1649edc214190836ea77e773 487 SUPERFAMILY SSF54631 94 202 1.39E-27 T 22-04-2016 RPIC12D_RS06880 d4b878cc1649edc214190836ea77e773 487 Pfam PF00571 CBS domain 94 138 2.2E-8 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS06880 d4b878cc1649edc214190836ea77e773 487 Pfam PF00571 CBS domain 153 202 1.7E-8 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS06880 d4b878cc1649edc214190836ea77e773 487 SMART SM00116 156 204 2.1E-9 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS06880 d4b878cc1649edc214190836ea77e773 487 SMART SM00116 95 142 6.7E-8 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS06880 d4b878cc1649edc214190836ea77e773 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 RPIC12D_RS06880 d4b878cc1649edc214190836ea77e773 487 PIRSF PIRSF000130 1 487 4.1E-204 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RPIC12D_RS06880 d4b878cc1649edc214190836ea77e773 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 455 7.6E-189 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RPIC12D_RS06880 d4b878cc1649edc214190836ea77e773 487 SMART SM01240 6 473 0.0 T 22-04-2016 RPIC12D_RS06880 d4b878cc1649edc214190836ea77e773 487 PANTHER PTHR11911 1 279 2.0E-243 T 22-04-2016 RPIC12D_RS06880 d4b878cc1649edc214190836ea77e773 487 PANTHER PTHR11911 297 486 2.0E-243 T 22-04-2016 RPIC12D_RS06880 d4b878cc1649edc214190836ea77e773 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 486 83.665 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RPIC12D_RS06880 d4b878cc1649edc214190836ea77e773 487 PANTHER PTHR11911:SF6 1 279 2.0E-243 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RPIC12D_RS06880 d4b878cc1649edc214190836ea77e773 487 PANTHER PTHR11911:SF6 297 486 2.0E-243 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RPIC12D_RS06880 d4b878cc1649edc214190836ea77e773 487 Gene3D G3DSA:3.20.20.70 5 485 3.7E-200 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS06880 d4b878cc1649edc214190836ea77e773 487 SUPERFAMILY SSF51412 215 477 2.75E-125 T 22-04-2016 RPIC12D_RS06880 d4b878cc1649edc214190836ea77e773 487 SUPERFAMILY SSF51412 2 89 2.75E-125 T 22-04-2016 RPIC12D_RS05705 448983989e6c92ba71dadb058858fa98 349 Gene3D G3DSA:3.40.190.10 57 143 3.6E-5 T 22-04-2016 RPIC12D_RS05705 448983989e6c92ba71dadb058858fa98 349 SMART SM00062 39 280 0.0042 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS05705 448983989e6c92ba71dadb058858fa98 349 PANTHER PTHR30024 1 279 4.2E-56 T 22-04-2016 RPIC12D_RS05705 448983989e6c92ba71dadb058858fa98 349 Gene3D G3DSA:3.40.190.10 144 257 4.2E-23 T 22-04-2016 RPIC12D_RS05705 448983989e6c92ba71dadb058858fa98 349 PANTHER PTHR30024:SF8 1 279 4.2E-56 T 22-04-2016 RPIC12D_RS05705 448983989e6c92ba71dadb058858fa98 349 Pfam PF13379 NMT1-like family 34 267 1.2E-30 T 22-04-2016 RPIC12D_RS05705 448983989e6c92ba71dadb058858fa98 349 SUPERFAMILY SSF53850 38 289 2.57E-45 T 22-04-2016 RPIC12D_RS11120 9346c6ec83913ef00b857100e1e78edc 156 Pfam PF01878 EVE domain 4 148 3.0E-52 T 22-04-2016 IPR002740 EVE domain RPIC12D_RS11120 9346c6ec83913ef00b857100e1e78edc 156 SUPERFAMILY SSF88697 3 149 1.56E-58 T 22-04-2016 IPR015947 PUA-like domain RPIC12D_RS11120 9346c6ec83913ef00b857100e1e78edc 156 PANTHER PTHR14087 4 147 1.6E-70 T 22-04-2016 RPIC12D_RS11120 9346c6ec83913ef00b857100e1e78edc 156 Gene3D G3DSA:3.10.590.10 4 151 6.3E-28 T 22-04-2016 IPR002740 EVE domain RPIC12D_RS11980 374e31cc66a0374ef8271171aeed02ad 256 PANTHER PTHR30136:SF14 21 253 1.2E-56 T 22-04-2016 RPIC12D_RS11980 374e31cc66a0374ef8271171aeed02ad 256 Gene3D G3DSA:3.30.450.40 86 247 4.2E-41 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS11980 374e31cc66a0374ef8271171aeed02ad 256 Gene3D G3DSA:1.10.10.10 19 84 1.1E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS11980 374e31cc66a0374ef8271171aeed02ad 256 SMART SM00346 17 105 1.9E-4 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC12D_RS11980 374e31cc66a0374ef8271171aeed02ad 256 PANTHER PTHR30136 21 253 1.2E-56 T 22-04-2016 RPIC12D_RS11980 374e31cc66a0374ef8271171aeed02ad 256 Pfam PF09339 IclR helix-turn-helix domain 21 66 3.4E-10 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC12D_RS11980 374e31cc66a0374ef8271171aeed02ad 256 SUPERFAMILY SSF55781 89 253 3.66E-34 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS11980 374e31cc66a0374ef8271171aeed02ad 256 Pfam PF01614 Bacterial transcriptional regulator 134 251 7.7E-15 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RPIC12D_RS11980 374e31cc66a0374ef8271171aeed02ad 256 SUPERFAMILY SSF46785 21 84 1.01E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12085 ab7bede6d41a38d144dfb53c706a588c 325 PANTHER PTHR30349 6 321 2.4E-88 T 22-04-2016 RPIC12D_RS12085 ab7bede6d41a38d144dfb53c706a588c 325 PANTHER PTHR30349:SF16 6 321 2.4E-88 T 22-04-2016 RPIC12D_RS12085 ab7bede6d41a38d144dfb53c706a588c 325 SUPERFAMILY SSF53850 110 279 1.74E-8 T 22-04-2016 RPIC12D_RS12085 ab7bede6d41a38d144dfb53c706a588c 325 PIRSF PIRSF017082 1 323 9.6E-75 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RPIC12D_RS12085 ab7bede6d41a38d144dfb53c706a588c 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 320 8.5E-83 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RPIC12D_RS05260 25665f8450acec099662d37cc207cde5 367 PANTHER PTHR30106:SF2 32 367 2.5E-101 T 22-04-2016 RPIC12D_RS05260 25665f8450acec099662d37cc207cde5 367 Pfam PF03601 Conserved hypothetical protein 698 27 343 9.3E-83 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 RPIC12D_RS05260 25665f8450acec099662d37cc207cde5 367 PANTHER PTHR30106 32 367 2.5E-101 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 RPIC12D_RS05260 25665f8450acec099662d37cc207cde5 367 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 32 362 5.9E-78 T 22-04-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 RPIC12D_RS03875 1cbbe7aca91f21fd65643340a0cc1455 175 PANTHER PTHR30154 1 147 5.5E-61 T 22-04-2016 RPIC12D_RS03875 1cbbe7aca91f21fd65643340a0cc1455 175 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RPIC12D_RS03875 1cbbe7aca91f21fd65643340a0cc1455 175 PANTHER PTHR30154:SF28 1 147 5.5E-61 T 22-04-2016 RPIC12D_RS03875 1cbbe7aca91f21fd65643340a0cc1455 175 Gene3D G3DSA:1.10.10.10 4 54 7.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS03875 1cbbe7aca91f21fd65643340a0cc1455 175 SUPERFAMILY SSF54909 64 147 2.41E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC12D_RS03875 1cbbe7aca91f21fd65643340a0cc1455 175 SUPERFAMILY SSF46785 2 62 2.21E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS03875 1cbbe7aca91f21fd65643340a0cc1455 175 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 2.9E-19 T 22-04-2016 RPIC12D_RS03875 1cbbe7aca91f21fd65643340a0cc1455 175 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 7.8E-21 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC12D_RS03875 1cbbe7aca91f21fd65643340a0cc1455 175 Gene3D G3DSA:3.30.70.920 57 147 2.5E-26 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC12D_RS03875 1cbbe7aca91f21fd65643340a0cc1455 175 SMART SM00344 3 112 9.9E-37 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RPIC12D_RS03875 1cbbe7aca91f21fd65643340a0cc1455 175 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 6.6E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS03875 1cbbe7aca91f21fd65643340a0cc1455 175 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 6.6E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS03875 1cbbe7aca91f21fd65643340a0cc1455 175 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 6.6E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS00890 61cabdbe5e489b36287313dd0df02c36 414 SUPERFAMILY SSF103473 12 400 3.14E-45 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS00890 61cabdbe5e489b36287313dd0df02c36 414 Gene3D G3DSA:1.20.1250.20 15 201 9.5E-25 T 22-04-2016 RPIC12D_RS00890 61cabdbe5e489b36287313dd0df02c36 414 Gene3D G3DSA:1.20.1250.20 220 399 1.4E-13 T 22-04-2016 RPIC12D_RS00890 61cabdbe5e489b36287313dd0df02c36 414 Pfam PF07690 Major Facilitator Superfamily 18 277 2.5E-20 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS00890 61cabdbe5e489b36287313dd0df02c36 414 PANTHER PTHR23501 62 398 9.2E-19 T 22-04-2016 RPIC12D_RS10230 716e85c8e0e073700c7a7cba757c1f4c 347 SUPERFAMILY SSF53067 3 121 1.23E-30 T 22-04-2016 RPIC12D_RS10230 716e85c8e0e073700c7a7cba757c1f4c 347 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 339 63.979 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC12D_RS10230 716e85c8e0e073700c7a7cba757c1f4c 347 Gene3D G3DSA:3.30.420.40 1 159 6.3E-49 T 22-04-2016 RPIC12D_RS10230 716e85c8e0e073700c7a7cba757c1f4c 347 PANTHER PTHR11735 1 342 1.4E-151 T 22-04-2016 RPIC12D_RS10230 716e85c8e0e073700c7a7cba757c1f4c 347 Pfam PF00814 Glycoprotease family 25 312 2.1E-100 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC12D_RS10230 716e85c8e0e073700c7a7cba757c1f4c 347 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 318 2.6E-133 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC12D_RS10230 716e85c8e0e073700c7a7cba757c1f4c 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 2.6E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC12D_RS10230 716e85c8e0e073700c7a7cba757c1f4c 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 268 277 2.6E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC12D_RS10230 716e85c8e0e073700c7a7cba757c1f4c 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 2.6E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC12D_RS10230 716e85c8e0e073700c7a7cba757c1f4c 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 2.6E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC12D_RS10230 716e85c8e0e073700c7a7cba757c1f4c 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 2.6E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC12D_RS10230 716e85c8e0e073700c7a7cba757c1f4c 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 2.6E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC12D_RS10230 716e85c8e0e073700c7a7cba757c1f4c 347 SUPERFAMILY SSF53067 101 314 2.95E-46 T 22-04-2016 RPIC12D_RS10230 716e85c8e0e073700c7a7cba757c1f4c 347 PANTHER PTHR11735:SF6 1 342 1.4E-151 T 22-04-2016 RPIC12D_RS10230 716e85c8e0e073700c7a7cba757c1f4c 347 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 311 2.2E-113 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC12D_RS12360 bafec8f39f27465693cb3a40d4c7c951 215 SUPERFAMILY SSF51064 159 213 2.22E-17 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 RPIC12D_RS12360 bafec8f39f27465693cb3a40d4c7c951 215 Gene3D G3DSA:3.90.20.20 63 156 1.3E-26 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil RPIC12D_RS12360 bafec8f39f27465693cb3a40d4c7c951 215 Pfam PF01025 GrpE 57 212 4.9E-47 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RPIC12D_RS12360 bafec8f39f27465693cb3a40d4c7c951 215 PRINTS PR00773 GrpE protein signature 86 102 1.7E-24 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RPIC12D_RS12360 bafec8f39f27465693cb3a40d4c7c951 215 PRINTS PR00773 GrpE protein signature 114 129 1.7E-24 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RPIC12D_RS12360 bafec8f39f27465693cb3a40d4c7c951 215 PRINTS PR00773 GrpE protein signature 166 181 1.7E-24 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RPIC12D_RS12360 bafec8f39f27465693cb3a40d4c7c951 215 PRINTS PR00773 GrpE protein signature 192 211 1.7E-24 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RPIC12D_RS12360 bafec8f39f27465693cb3a40d4c7c951 215 SUPERFAMILY SSF58014 63 156 1.01E-22 T 22-04-2016 RPIC12D_RS12360 bafec8f39f27465693cb3a40d4c7c951 215 PANTHER PTHR21237 34 215 1.0E-53 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RPIC12D_RS12360 bafec8f39f27465693cb3a40d4c7c951 215 Gene3D G3DSA:2.30.22.10 159 214 1.9E-25 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 RPIC12D_RS12360 bafec8f39f27465693cb3a40d4c7c951 215 ProSitePatterns PS01071 grpE protein signature. 169 211 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RPIC12D_RS12360 bafec8f39f27465693cb3a40d4c7c951 215 Hamap MF_01151 Protein GrpE [grpE]. 15 213 18.831 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RPIC12D_RS00565 84c33d193518303824e2885c11c81af5 385 SUPERFAMILY SSF47203 227 381 6.6E-46 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS00565 84c33d193518303824e2885c11c81af5 385 Gene3D G3DSA:1.20.140.10 219 383 1.7E-55 T 22-04-2016 RPIC12D_RS00565 84c33d193518303824e2885c11c81af5 385 PANTHER PTHR10909:SF227 3 384 5.2E-250 T 22-04-2016 RPIC12D_RS00565 84c33d193518303824e2885c11c81af5 385 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RPIC12D_RS00565 84c33d193518303824e2885c11c81af5 385 Gene3D G3DSA:2.40.110.10 121 218 4.8E-41 T 22-04-2016 RPIC12D_RS00565 84c33d193518303824e2885c11c81af5 385 Gene3D G3DSA:1.10.540.10 2 118 4.1E-31 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS00565 84c33d193518303824e2885c11c81af5 385 PANTHER PTHR10909 3 384 5.2E-250 T 22-04-2016 RPIC12D_RS00565 84c33d193518303824e2885c11c81af5 385 SUPERFAMILY SSF56645 2 241 6.41E-81 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC12D_RS00565 84c33d193518303824e2885c11c81af5 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 118 5.2E-28 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS00565 84c33d193518303824e2885c11c81af5 385 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RPIC12D_RS00565 84c33d193518303824e2885c11c81af5 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 375 1.9E-41 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS00565 84c33d193518303824e2885c11c81af5 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 1.4E-26 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC12D_RS15025 ed5031f8be7168adca7b7e255b07f477 265 SUPERFAMILY SSF51182 16 184 1.6E-17 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS15025 ed5031f8be7168adca7b7e255b07f477 265 SMART SM00342 175 257 6.4E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS15025 ed5031f8be7168adca7b7e255b07f477 265 SUPERFAMILY SSF46689 218 258 6.65E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS15025 ed5031f8be7168adca7b7e255b07f477 265 Pfam PF02311 AraC-like ligand binding domain 24 132 3.2E-12 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RPIC12D_RS15025 ed5031f8be7168adca7b7e255b07f477 265 PANTHER PTHR11019 21 265 2.0E-68 T 22-04-2016 RPIC12D_RS15025 ed5031f8be7168adca7b7e255b07f477 265 Gene3D G3DSA:2.60.120.10 20 92 5.9E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS15025 ed5031f8be7168adca7b7e255b07f477 265 Pfam PF12833 Helix-turn-helix domain 181 259 4.7E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS15025 ed5031f8be7168adca7b7e255b07f477 265 Gene3D G3DSA:1.10.10.60 154 210 9.0E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS15025 ed5031f8be7168adca7b7e255b07f477 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 257 4.9E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RPIC12D_RS15025 ed5031f8be7168adca7b7e255b07f477 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 226 241 4.9E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RPIC12D_RS15025 ed5031f8be7168adca7b7e255b07f477 265 Gene3D G3DSA:1.10.10.60 221 256 3.2E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS15025 ed5031f8be7168adca7b7e255b07f477 265 PANTHER PTHR11019:SF99 21 265 2.0E-68 T 22-04-2016 RPIC12D_RS00370 edf10a28418015f62954686dd855519e 158 Gene3D G3DSA:1.20.120.520 35 149 1.1E-11 T 22-04-2016 RPIC12D_RS00370 edf10a28418015f62954686dd855519e 158 PANTHER PTHR35585 13 143 1.4E-16 T 22-04-2016 RPIC12D_RS00370 edf10a28418015f62954686dd855519e 158 Pfam PF01814 Hemerythrin HHE cation binding domain 14 131 2.1E-15 T 22-04-2016 IPR012312 Haemerythrin-like RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 868 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 PANTHER PTHR11638 1 145 0.0 T 22-04-2016 RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 PANTHER PTHR11638 172 897 0.0 T 22-04-2016 RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 26 74 1.5E-5 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 233 364 1.7E-11 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 PANTHER PTHR11638:SF122 1 145 0.0 T 22-04-2016 RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 PANTHER PTHR11638:SF122 172 897 0.0 T 22-04-2016 RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 784 853 5.6E-14 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 Gene3D G3DSA:1.10.1780.10 9 131 1.3E-20 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 Gene3D G3DSA:1.10.8.60 375 455 3.5E-27 T 22-04-2016 RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 SMART SM01086 784 876 1.1E-10 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 616 634 1.1E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 723 737 1.1E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 690 708 1.1E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 661 679 1.1E-32 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 324 336 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 SUPERFAMILY SSF52540 561 851 1.8E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 Pfam PF07724 AAA domain (Cdc48 subfamily) 611 777 4.6E-36 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 Gene3D G3DSA:3.40.50.300 566 795 1.7E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 Gene3D G3DSA:1.10.8.60 796 859 1.8E-11 T 22-04-2016 RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 SUPERFAMILY SSF52540 190 517 3.9E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 SUPERFAMILY SSF81923 12 131 6.15E-19 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 SMART SM00382 228 369 1.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 SMART SM00382 612 753 8.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS08480 2b099a51c81b00ccedfce0eafc1cb1be 898 Gene3D G3DSA:3.40.50.300 190 371 2.9E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09090 adfcfdaf60223e08a71b5c6bf2d6cd58 273 PRINTS PR00164 ABC-2 type transport system membrane protein signature 76 98 5.9E-49 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC12D_RS09090 adfcfdaf60223e08a71b5c6bf2d6cd58 273 PRINTS PR00164 ABC-2 type transport system membrane protein signature 46 67 5.9E-49 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC12D_RS09090 adfcfdaf60223e08a71b5c6bf2d6cd58 273 PRINTS PR00164 ABC-2 type transport system membrane protein signature 195 214 5.9E-49 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC12D_RS09090 adfcfdaf60223e08a71b5c6bf2d6cd58 273 PRINTS PR00164 ABC-2 type transport system membrane protein signature 158 182 5.9E-49 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC12D_RS09090 adfcfdaf60223e08a71b5c6bf2d6cd58 273 PRINTS PR00164 ABC-2 type transport system membrane protein signature 121 146 5.9E-49 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC12D_RS09090 adfcfdaf60223e08a71b5c6bf2d6cd58 273 PRINTS PR00164 ABC-2 type transport system membrane protein signature 215 234 5.9E-49 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC12D_RS09090 adfcfdaf60223e08a71b5c6bf2d6cd58 273 PANTHER PTHR30413:SF7 20 273 7.6E-90 T 22-04-2016 RPIC12D_RS09090 adfcfdaf60223e08a71b5c6bf2d6cd58 273 PANTHER PTHR30413 20 273 7.6E-90 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC12D_RS09090 adfcfdaf60223e08a71b5c6bf2d6cd58 273 TIGRFAM TIGR01291 nodJ: ABC-2 type transporter, NodJ family 23 271 2.7E-91 T 22-04-2016 IPR005981 ABC-2 type transporter, NodJ GO:0005215|GO:0009877|GO:0015772|GO:0016020 RPIC12D_RS09090 adfcfdaf60223e08a71b5c6bf2d6cd58 273 PIRSF PIRSF006648 2 272 6.8E-23 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC12D_RS09090 adfcfdaf60223e08a71b5c6bf2d6cd58 273 Pfam PF01061 ABC-2 type transporter 26 237 2.1E-23 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RPIC12D_RS14680 e736eea9d997077d291b959b5bdd80b0 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 118 9.8E-37 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14680 e736eea9d997077d291b959b5bdd80b0 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 118 1.0E-35 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14680 e736eea9d997077d291b959b5bdd80b0 118 SUPERFAMILY SSF53137 3 116 1.11E-49 T 22-04-2016 RPIC12D_RS14680 e736eea9d997077d291b959b5bdd80b0 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 118 26.054 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14680 e736eea9d997077d291b959b5bdd80b0 118 PANTHER PTHR12899 1 118 1.8E-34 T 22-04-2016 RPIC12D_RS14680 e736eea9d997077d291b959b5bdd80b0 118 Gene3D G3DSA:3.30.420.100 24 118 4.3E-35 T 22-04-2016 RPIC12D_RS04195 c931cd05a67cc3e0b97c5c31507fce53 218 SUPERFAMILY SSF103088 91 211 4.19E-32 T 22-04-2016 IPR006665 OmpA-like domain RPIC12D_RS04195 c931cd05a67cc3e0b97c5c31507fce53 218 PRINTS PR01021 OMPA domain signature 103 125 7.8E-20 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RPIC12D_RS04195 c931cd05a67cc3e0b97c5c31507fce53 218 PRINTS PR01021 OMPA domain signature 148 164 7.8E-20 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RPIC12D_RS04195 c931cd05a67cc3e0b97c5c31507fce53 218 PRINTS PR01021 OMPA domain signature 133 148 7.8E-20 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RPIC12D_RS04195 c931cd05a67cc3e0b97c5c31507fce53 218 PANTHER PTHR30128:SF16 73 218 1.7E-27 T 22-04-2016 RPIC12D_RS04195 c931cd05a67cc3e0b97c5c31507fce53 218 Pfam PF00691 OmpA family 102 186 1.4E-18 T 22-04-2016 IPR006665 OmpA-like domain RPIC12D_RS04195 c931cd05a67cc3e0b97c5c31507fce53 218 Gene3D G3DSA:3.30.1330.60 91 212 6.5E-36 T 22-04-2016 IPR006665 OmpA-like domain RPIC12D_RS04195 c931cd05a67cc3e0b97c5c31507fce53 218 PRINTS PR01022 Outer membrane protein A signature 190 203 8.3E-5 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 RPIC12D_RS04195 c931cd05a67cc3e0b97c5c31507fce53 218 PRINTS PR01022 Outer membrane protein A signature 91 106 8.3E-5 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 RPIC12D_RS04195 c931cd05a67cc3e0b97c5c31507fce53 218 PRINTS PR01022 Outer membrane protein A signature 157 176 8.3E-5 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 RPIC12D_RS04195 c931cd05a67cc3e0b97c5c31507fce53 218 PANTHER PTHR30128 73 218 1.7E-27 T 22-04-2016 RPIC12D_RS01890 89666c69c80624cb9d4558f12df15ce6 148 Gene3D G3DSA:2.20.25.10 1 36 1.7E-17 T 22-04-2016 RPIC12D_RS01890 89666c69c80624cb9d4558f12df15ce6 148 SUPERFAMILY SSF82784 1 138 1.06E-39 T 22-04-2016 IPR003718 OsmC/Ohr family RPIC12D_RS01890 89666c69c80624cb9d4558f12df15ce6 148 Gene3D G3DSA:3.30.300.20 41 138 9.2E-43 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RPIC12D_RS01890 89666c69c80624cb9d4558f12df15ce6 148 Pfam PF02566 OsmC-like protein 36 133 6.7E-17 T 22-04-2016 IPR003718 OsmC/Ohr family RPIC12D_RS01890 89666c69c80624cb9d4558f12df15ce6 148 PANTHER PTHR34352 1 141 4.8E-42 T 22-04-2016 RPIC12D_RS10550 93235b2a8f431a93a5673e45efd0c0db 305 Gene3D G3DSA:3.60.15.10 4 305 7.7E-112 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS10550 93235b2a8f431a93a5673e45efd0c0db 305 Pfam PF12706 Beta-lactamase superfamily domain 51 272 1.4E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS10550 93235b2a8f431a93a5673e45efd0c0db 305 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 5 305 1.3E-118 T 22-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 RPIC12D_RS10550 93235b2a8f431a93a5673e45efd0c0db 305 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 305 165.92 T 22-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 RPIC12D_RS10550 93235b2a8f431a93a5673e45efd0c0db 305 SUPERFAMILY SSF56281 4 305 8.57E-56 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS16855 906a402dfaf8130fcdf8c9fe9eb54781 312 PANTHER PTHR30537:SF5 1 310 9.0E-109 T 22-04-2016 RPIC12D_RS16855 906a402dfaf8130fcdf8c9fe9eb54781 312 PANTHER PTHR30537 1 310 9.0E-109 T 22-04-2016 RPIC12D_RS16855 906a402dfaf8130fcdf8c9fe9eb54781 312 Gene3D G3DSA:3.40.190.10 178 262 2.8E-23 T 22-04-2016 RPIC12D_RS16855 906a402dfaf8130fcdf8c9fe9eb54781 312 Gene3D G3DSA:3.40.190.10 93 177 3.4E-19 T 22-04-2016 RPIC12D_RS16855 906a402dfaf8130fcdf8c9fe9eb54781 312 SUPERFAMILY SSF46785 4 86 9.44E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16855 906a402dfaf8130fcdf8c9fe9eb54781 312 Pfam PF03466 LysR substrate binding domain 88 293 3.3E-42 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS16855 906a402dfaf8130fcdf8c9fe9eb54781 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 7.3E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS16855 906a402dfaf8130fcdf8c9fe9eb54781 312 Gene3D G3DSA:1.10.10.10 3 81 7.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16855 906a402dfaf8130fcdf8c9fe9eb54781 312 SUPERFAMILY SSF53850 90 294 1.5E-43 T 22-04-2016 RPIC12D_RS12220 53766045d25c25913f27cae181bb5a26 195 SUPERFAMILY SSF48695 13 192 1.99E-64 T 22-04-2016 IPR011031 Multihaem cytochrome RPIC12D_RS12220 53766045d25c25913f27cae181bb5a26 195 Gene3D G3DSA:1.10.3820.10 16 189 1.0E-26 T 22-04-2016 RPIC12D_RS12220 53766045d25c25913f27cae181bb5a26 195 PANTHER PTHR30333 1 189 1.6E-111 T 22-04-2016 RPIC12D_RS12220 53766045d25c25913f27cae181bb5a26 195 PIRSF PIRSF000013 1 195 1.9E-104 T 22-04-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 RPIC12D_RS12220 53766045d25c25913f27cae181bb5a26 195 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 5 190 4.3E-98 T 22-04-2016 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 RPIC12D_RS12220 53766045d25c25913f27cae181bb5a26 195 PANTHER PTHR30333:SF1 1 189 1.6E-111 T 22-04-2016 RPIC12D_RS12220 53766045d25c25913f27cae181bb5a26 195 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 189 2.9E-75 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal RPIC12D_RS01220 96a2788e809a4da94cbf9ab8e1e63580 313 PANTHER PTHR11048 22 303 1.1E-71 T 22-04-2016 RPIC12D_RS01220 96a2788e809a4da94cbf9ab8e1e63580 313 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 74 96 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site RPIC12D_RS01220 96a2788e809a4da94cbf9ab8e1e63580 313 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 19 300 19.008 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 RPIC12D_RS01220 96a2788e809a4da94cbf9ab8e1e63580 313 Pfam PF01040 UbiA prenyltransferase family 35 281 8.0E-59 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RPIC12D_RS01220 96a2788e809a4da94cbf9ab8e1e63580 313 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 22 299 3.5E-89 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 RPIC12D_RS15785 bfe0c6e6a895b118dab36c258a84eef5 303 PANTHER PTHR30537 1 301 7.0E-106 T 22-04-2016 RPIC12D_RS15785 bfe0c6e6a895b118dab36c258a84eef5 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.1E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS15785 bfe0c6e6a895b118dab36c258a84eef5 303 SUPERFAMILY SSF46785 4 85 6.05E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS15785 bfe0c6e6a895b118dab36c258a84eef5 303 Pfam PF03466 LysR substrate binding domain 90 291 1.1E-39 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS15785 bfe0c6e6a895b118dab36c258a84eef5 303 Gene3D G3DSA:3.40.190.10 92 176 1.3E-22 T 22-04-2016 RPIC12D_RS15785 bfe0c6e6a895b118dab36c258a84eef5 303 PANTHER PTHR30537:SF5 1 301 7.0E-106 T 22-04-2016 RPIC12D_RS15785 bfe0c6e6a895b118dab36c258a84eef5 303 SUPERFAMILY SSF53850 91 297 3.14E-44 T 22-04-2016 RPIC12D_RS15785 bfe0c6e6a895b118dab36c258a84eef5 303 Gene3D G3DSA:3.40.190.10 177 261 5.7E-21 T 22-04-2016 RPIC12D_RS15785 bfe0c6e6a895b118dab36c258a84eef5 303 Gene3D G3DSA:1.10.10.10 3 83 3.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 SUPERFAMILY SSF55874 370 543 2.62E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 SMART SM00388 316 381 5.2E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 429 543 6.3E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 Gene3D G3DSA:3.40.50.2300 581 694 1.1E-32 T 22-04-2016 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 264 3.6E-24 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 SMART SM00448 584 700 3.8E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 PANTHER PTHR24423 314 548 5.4E-115 T 22-04-2016 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 PANTHER PTHR24423 569 741 5.4E-115 T 22-04-2016 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 Gene3D G3DSA:3.40.190.10 44 129 8.6E-16 T 22-04-2016 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 Gene3D G3DSA:3.40.190.10 228 265 8.6E-16 T 22-04-2016 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 Gene3D G3DSA:3.40.190.10 130 212 1.7E-7 T 22-04-2016 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 SUPERFAMILY SSF47384 299 381 1.69E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 Pfam PF01627 Hpt domain 726 795 9.7E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 SUPERFAMILY SSF47226 683 801 6.41E-15 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 Gene3D G3DSA:3.30.565.10 383 547 2.9E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 Gene3D G3DSA:1.20.120.160 695 802 1.1E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 SMART SM00387 428 545 5.8E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 Pfam PF00072 Response regulator receiver domain 586 700 1.2E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 Pfam PF00512 His Kinase A (phospho-acceptor) domain 318 380 1.8E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 SUPERFAMILY SSF52172 583 704 6.55E-32 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 SUPERFAMILY SSF53850 38 266 3.88E-34 T 22-04-2016 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 SMART SM00062 45 268 4.4E-15 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 Gene3D G3DSA:1.10.287.130 312 377 1.5E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 542 2.2E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 484 2.2E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 498 2.2E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS04135 5ae4b68b55527a3998bc4d50cc02f7a3 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 523 2.2E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS10400 8a637302dbfdd173692dcc3afa80b4ee 220 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 12 217 4.9E-95 T 22-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 RPIC12D_RS10400 8a637302dbfdd173692dcc3afa80b4ee 220 Pfam PF01144 Coenzyme A transferase 15 203 7.0E-40 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC12D_RS10400 8a637302dbfdd173692dcc3afa80b4ee 220 SUPERFAMILY SSF100950 12 219 3.14E-69 T 22-04-2016 RPIC12D_RS10400 8a637302dbfdd173692dcc3afa80b4ee 220 Gene3D G3DSA:3.40.810.20 12 218 4.4E-84 T 22-04-2016 RPIC12D_RS10400 8a637302dbfdd173692dcc3afa80b4ee 220 SMART SM00882 15 212 1.3E-69 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC12D_RS10400 8a637302dbfdd173692dcc3afa80b4ee 220 PANTHER PTHR13707 12 217 8.8E-89 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC12D_RS09590 e390bf3f8da92f6dd80aca6ee8c3952d 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 4.1E-26 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS09590 e390bf3f8da92f6dd80aca6ee8c3952d 163 Gene3D G3DSA:3.30.70.1150 83 162 7.9E-29 T 22-04-2016 RPIC12D_RS09590 e390bf3f8da92f6dd80aca6ee8c3952d 163 Gene3D G3DSA:3.30.70.260 1 78 9.2E-37 T 22-04-2016 RPIC12D_RS09590 e390bf3f8da92f6dd80aca6ee8c3952d 163 Pfam PF13710 ACT domain 12 73 1.8E-15 T 22-04-2016 RPIC12D_RS09590 e390bf3f8da92f6dd80aca6ee8c3952d 163 SUPERFAMILY SSF55021 79 162 1.68E-25 T 22-04-2016 RPIC12D_RS09590 e390bf3f8da92f6dd80aca6ee8c3952d 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 6.0E-37 T 22-04-2016 RPIC12D_RS09590 e390bf3f8da92f6dd80aca6ee8c3952d 163 PANTHER PTHR30239 1 161 2.2E-82 T 22-04-2016 RPIC12D_RS09590 e390bf3f8da92f6dd80aca6ee8c3952d 163 SUPERFAMILY SSF55021 1 76 2.37E-22 T 22-04-2016 RPIC12D_RS09590 e390bf3f8da92f6dd80aca6ee8c3952d 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 3.3E-63 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS04525 45f4fe0ca29554595809e87f3b0a788c 439 PANTHER PTHR23508 25 433 9.4E-119 T 22-04-2016 RPIC12D_RS04525 45f4fe0ca29554595809e87f3b0a788c 439 PANTHER PTHR23508:SF13 25 433 9.4E-119 T 22-04-2016 RPIC12D_RS04525 45f4fe0ca29554595809e87f3b0a788c 439 Pfam PF07690 Major Facilitator Superfamily 74 384 3.5E-24 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS04525 45f4fe0ca29554595809e87f3b0a788c 439 Gene3D G3DSA:1.20.1250.20 27 231 4.2E-25 T 22-04-2016 RPIC12D_RS04525 45f4fe0ca29554595809e87f3b0a788c 439 Gene3D G3DSA:1.20.1250.20 247 434 5.9E-22 T 22-04-2016 RPIC12D_RS04525 45f4fe0ca29554595809e87f3b0a788c 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 305 321 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS04525 45f4fe0ca29554595809e87f3b0a788c 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 90 106 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS04525 45f4fe0ca29554595809e87f3b0a788c 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 140 165 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS04525 45f4fe0ca29554595809e87f3b0a788c 439 SUPERFAMILY SSF103473 27 437 7.85E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS04015 f4c1033b790614b8a6cb044c7f4ec47a 73 Pfam PF13275 S4 domain 7 69 2.5E-23 T 22-04-2016 RPIC12D_RS04015 f4c1033b790614b8a6cb044c7f4ec47a 73 PANTHER PTHR32319 7 69 1.8E-17 T 22-04-2016 RPIC12D_RS04015 f4c1033b790614b8a6cb044c7f4ec47a 73 PANTHER PTHR32319:SF3 7 69 1.8E-17 T 22-04-2016 RPIC12D_RS04015 f4c1033b790614b8a6cb044c7f4ec47a 73 SUPERFAMILY SSF55174 4 69 2.55E-17 T 22-04-2016 RPIC12D_RS04015 f4c1033b790614b8a6cb044c7f4ec47a 73 Gene3D G3DSA:3.10.290.10 1 69 1.8E-25 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS13635 6a6a18e1408f714fe0994e71e9981b3a 499 Gene3D G3DSA:3.90.190.20 354 488 7.9E-47 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC12D_RS13635 6a6a18e1408f714fe0994e71e9981b3a 499 Gene3D G3DSA:3.40.50.720 10 101 2.1E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS13635 6a6a18e1408f714fe0994e71e9981b3a 499 PANTHER PTHR23135 1 495 1.5E-133 T 22-04-2016 RPIC12D_RS13635 6a6a18e1408f714fe0994e71e9981b3a 499 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 10 488 1.9E-114 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS13635 6a6a18e1408f714fe0994e71e9981b3a 499 Pfam PF02875 Mur ligase family, glutamate ligase domain 354 422 4.9E-6 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC12D_RS13635 6a6a18e1408f714fe0994e71e9981b3a 499 PANTHER PTHR23135:SF2 1 495 1.5E-133 T 22-04-2016 RPIC12D_RS13635 6a6a18e1408f714fe0994e71e9981b3a 499 SUPERFAMILY SSF53244 352 491 3.89E-42 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC12D_RS13635 6a6a18e1408f714fe0994e71e9981b3a 499 Pfam PF08245 Mur ligase middle domain 127 333 3.0E-28 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13635 6a6a18e1408f714fe0994e71e9981b3a 499 SUPERFAMILY SSF51984 9 91 9.42E-14 T 22-04-2016 RPIC12D_RS13635 6a6a18e1408f714fe0994e71e9981b3a 499 SUPERFAMILY SSF53623 293 350 1.15E-47 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13635 6a6a18e1408f714fe0994e71e9981b3a 499 SUPERFAMILY SSF53623 122 261 1.15E-47 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13635 6a6a18e1408f714fe0994e71e9981b3a 499 Gene3D G3DSA:3.40.1190.10 102 259 1.9E-73 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13635 6a6a18e1408f714fe0994e71e9981b3a 499 Gene3D G3DSA:3.40.1190.10 291 352 1.9E-73 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13635 6a6a18e1408f714fe0994e71e9981b3a 499 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 491 33.303 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS14700 d4f0e1d1b92388f00afdf310e086d5af 180 Pfam PF00281 Ribosomal protein L5 25 81 3.4E-25 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal RPIC12D_RS14700 d4f0e1d1b92388f00afdf310e086d5af 180 PANTHER PTHR11994 1 179 2.7E-86 T 22-04-2016 RPIC12D_RS14700 d4f0e1d1b92388f00afdf310e086d5af 180 PIRSF PIRSF002161 1 180 1.1E-61 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14700 d4f0e1d1b92388f00afdf310e086d5af 180 SUPERFAMILY SSF55282 4 180 2.03E-75 T 22-04-2016 IPR022803 Ribosomal protein L5 domain RPIC12D_RS14700 d4f0e1d1b92388f00afdf310e086d5af 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.867 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14700 d4f0e1d1b92388f00afdf310e086d5af 180 Pfam PF00673 ribosomal L5P family C-terminus 85 178 6.3E-39 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal RPIC12D_RS14700 d4f0e1d1b92388f00afdf310e086d5af 180 Gene3D G3DSA:3.30.1440.10 3 180 6.1E-75 T 22-04-2016 IPR022803 Ribosomal protein L5 domain RPIC12D_RS14700 d4f0e1d1b92388f00afdf310e086d5af 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 22-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS04170 9cc891f991b1f1ea714d42a7c903d9d6 334 PANTHER PTHR33420 194 334 1.4E-24 T 22-04-2016 RPIC12D_RS04170 9cc891f991b1f1ea714d42a7c903d9d6 334 PANTHER PTHR33420:SF1 194 334 1.4E-24 T 22-04-2016 RPIC12D_RS04170 9cc891f991b1f1ea714d42a7c903d9d6 334 Gene3D G3DSA:2.60.40.1090 199 334 1.5E-22 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RPIC12D_RS04170 9cc891f991b1f1ea714d42a7c903d9d6 334 SUPERFAMILY SSF49401 196 334 2.44E-20 T 22-04-2016 IPR008966 Adhesion domain RPIC12D_RS04170 9cc891f991b1f1ea714d42a7c903d9d6 334 Pfam PF00419 Fimbrial protein 193 333 1.5E-9 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RPIC12D_RS08305 561cd8aff4e850c729cc660d90f9ab7b 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 233 247 3.5E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS08305 561cd8aff4e850c729cc660d90f9ab7b 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 58 73 3.5E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS08305 561cd8aff4e850c729cc660d90f9ab7b 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 3.5E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS08305 561cd8aff4e850c729cc660d90f9ab7b 289 Gene3D G3DSA:3.40.50.1820 19 286 5.3E-76 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS08305 561cd8aff4e850c729cc660d90f9ab7b 289 SUPERFAMILY SSF53474 19 282 3.94E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS08305 561cd8aff4e850c729cc660d90f9ab7b 289 Pfam PF12697 Alpha/beta hydrolase family 35 280 1.2E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS08305 561cd8aff4e850c729cc660d90f9ab7b 289 PANTHER PTHR10992 20 289 9.5E-30 T 22-04-2016 RPIC12D_RS08305 561cd8aff4e850c729cc660d90f9ab7b 289 PANTHER PTHR10992:SF771 20 289 9.5E-30 T 22-04-2016 RPIC12D_RS11565 414478ea914555775bdf06fa92195afd 268 PANTHER PTHR11732:SF100 4 268 5.4E-158 T 22-04-2016 RPIC12D_RS11565 414478ea914555775bdf06fa92195afd 268 SUPERFAMILY SSF51430 3 258 4.32E-83 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RPIC12D_RS11565 414478ea914555775bdf06fa92195afd 268 PIRSF PIRSF000097 1 266 2.7E-69 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC12D_RS11565 414478ea914555775bdf06fa92195afd 268 Gene3D G3DSA:3.20.20.100 3 259 3.6E-90 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RPIC12D_RS11565 414478ea914555775bdf06fa92195afd 268 PRINTS PR00069 Aldo-keto reductase signature 187 211 3.6E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC12D_RS11565 414478ea914555775bdf06fa92195afd 268 PRINTS PR00069 Aldo-keto reductase signature 115 132 3.6E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC12D_RS11565 414478ea914555775bdf06fa92195afd 268 PRINTS PR00069 Aldo-keto reductase signature 26 50 3.6E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC12D_RS11565 414478ea914555775bdf06fa92195afd 268 PRINTS PR00069 Aldo-keto reductase signature 82 100 3.6E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC12D_RS11565 414478ea914555775bdf06fa92195afd 268 PRINTS PR00069 Aldo-keto reductase signature 150 179 3.6E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC12D_RS11565 414478ea914555775bdf06fa92195afd 268 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 115 132 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RPIC12D_RS11565 414478ea914555775bdf06fa92195afd 268 PANTHER PTHR11732 4 268 5.4E-158 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RPIC12D_RS11565 414478ea914555775bdf06fa92195afd 268 Pfam PF00248 Aldo/keto reductase family 18 251 1.2E-49 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RPIC12D_RS08315 461b09442300f904733af9eaab50bc6e 211 PANTHER PTHR13707 2 207 5.1E-123 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC12D_RS08315 461b09442300f904733af9eaab50bc6e 211 SUPERFAMILY SSF100950 3 209 1.03E-69 T 22-04-2016 RPIC12D_RS08315 461b09442300f904733af9eaab50bc6e 211 Gene3D G3DSA:3.40.810.20 3 210 8.9E-91 T 22-04-2016 RPIC12D_RS08315 461b09442300f904733af9eaab50bc6e 211 SMART SM00882 6 205 1.8E-82 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC12D_RS08315 461b09442300f904733af9eaab50bc6e 211 Pfam PF01144 Coenzyme A transferase 7 204 1.1E-37 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC12D_RS08315 461b09442300f904733af9eaab50bc6e 211 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 210 1.3E-93 T 22-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 RPIC12D_RS02710 a51a640202e386d365fb6098c7364aaf 325 Pfam PF00482 Type II secretion system (T2SS), protein F 158 282 3.2E-18 T 22-04-2016 IPR018076 Type II secretion system F domain RPIC12D_RS02710 a51a640202e386d365fb6098c7364aaf 325 PANTHER PTHR35007:SF1 1 325 3.9E-63 T 22-04-2016 RPIC12D_RS02710 a51a640202e386d365fb6098c7364aaf 325 PANTHER PTHR35007 1 325 3.9E-63 T 22-04-2016 RPIC12D_RS08165 e6f859a5564cdcdc366e2b8daf8334e6 269 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 1.7E-70 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RPIC12D_RS08165 e6f859a5564cdcdc366e2b8daf8334e6 269 PANTHER PTHR22748 1 267 2.8E-101 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RPIC12D_RS08165 e6f859a5564cdcdc366e2b8daf8334e6 269 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 265 3.3E-75 T 22-04-2016 RPIC12D_RS08165 e6f859a5564cdcdc366e2b8daf8334e6 269 SUPERFAMILY SSF56219 1 266 2.88E-79 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC12D_RS08165 e6f859a5564cdcdc366e2b8daf8334e6 269 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 1.5E-26 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC12D_RS08165 e6f859a5564cdcdc366e2b8daf8334e6 269 PANTHER PTHR22748:SF7 1 267 2.8E-101 T 22-04-2016 RPIC12D_RS08165 e6f859a5564cdcdc366e2b8daf8334e6 269 Gene3D G3DSA:3.60.10.10 1 267 1.1E-79 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC12D_RS06665 b44dd96d10cfbcbcfa6a7335fe4c38ba 383 Gene3D G3DSA:3.30.70.360 196 296 1.4E-36 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS06665 b44dd96d10cfbcbcfa6a7335fe4c38ba 383 Pfam PF07687 Peptidase dimerisation domain 183 290 2.4E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS06665 b44dd96d10cfbcbcfa6a7335fe4c38ba 383 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 381 1.0E-157 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 RPIC12D_RS06665 b44dd96d10cfbcbcfa6a7335fe4c38ba 383 Pfam PF01546 Peptidase family M20/M25/M40 71 379 5.6E-44 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC12D_RS06665 b44dd96d10cfbcbcfa6a7335fe4c38ba 383 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 383 51.298 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 RPIC12D_RS06665 b44dd96d10cfbcbcfa6a7335fe4c38ba 383 Gene3D G3DSA:3.40.630.10 2 195 8.7E-72 T 22-04-2016 RPIC12D_RS06665 b44dd96d10cfbcbcfa6a7335fe4c38ba 383 Gene3D G3DSA:3.40.630.10 324 381 8.7E-72 T 22-04-2016 RPIC12D_RS06665 b44dd96d10cfbcbcfa6a7335fe4c38ba 383 SUPERFAMILY SSF55031 187 296 2.54E-30 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS06665 b44dd96d10cfbcbcfa6a7335fe4c38ba 383 PANTHER PTHR11014 2 383 1.1E-82 T 22-04-2016 RPIC12D_RS06665 b44dd96d10cfbcbcfa6a7335fe4c38ba 383 SUPERFAMILY SSF53187 3 186 2.1E-60 T 22-04-2016 RPIC12D_RS06665 b44dd96d10cfbcbcfa6a7335fe4c38ba 383 SUPERFAMILY SSF53187 300 381 2.1E-60 T 22-04-2016 RPIC12D_RS11070 29a7adb6d3a5ba6b81e212dd360f6ee3 318 SUPERFAMILY SSF53807 31 298 3.81E-69 T 22-04-2016 RPIC12D_RS11070 29a7adb6d3a5ba6b81e212dd360f6ee3 318 Pfam PF01497 Periplasmic binding protein 52 278 3.9E-31 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RPIC12D_RS11070 29a7adb6d3a5ba6b81e212dd360f6ee3 318 Gene3D G3DSA:3.40.50.1980 49 167 6.3E-35 T 22-04-2016 RPIC12D_RS11070 29a7adb6d3a5ba6b81e212dd360f6ee3 318 Gene3D G3DSA:3.40.50.1980 170 300 1.5E-34 T 22-04-2016 RPIC12D_RS11070 29a7adb6d3a5ba6b81e212dd360f6ee3 318 PANTHER PTHR30535 33 300 1.6E-61 T 22-04-2016 RPIC12D_RS13590 35896e079e256f1132195ea5ad44c535 305 SUPERFAMILY SSF54211 3 124 1.82E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS13590 35896e079e256f1132195ea5ad44c535 305 PANTHER PTHR33694:SF1 1 299 2.0E-134 T 22-04-2016 RPIC12D_RS13590 35896e079e256f1132195ea5ad44c535 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 4.1E-108 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RPIC12D_RS13590 35896e079e256f1132195ea5ad44c535 305 PANTHER PTHR33694 1 299 2.0E-134 T 22-04-2016 RPIC12D_RS13590 35896e079e256f1132195ea5ad44c535 305 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 280 50.693 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RPIC12D_RS13590 35896e079e256f1132195ea5ad44c535 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 296 7.3E-124 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RPIC12D_RS13590 35896e079e256f1132195ea5ad44c535 305 Gene3D G3DSA:3.30.1700.10 128 282 6.4E-59 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RPIC12D_RS13590 35896e079e256f1132195ea5ad44c535 305 Gene3D G3DSA:3.30.230.20 3 125 1.1E-45 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RPIC12D_RS13590 35896e079e256f1132195ea5ad44c535 305 SUPERFAMILY SSF54211 133 277 5.69E-51 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS19325 9b59d72f2de16c9e5be548d665c18780 301 SUPERFAMILY SSF55681 20 301 2.45E-114 T 22-04-2016 RPIC12D_RS19325 9b59d72f2de16c9e5be548d665c18780 301 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 21 301 4.5E-134 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS19325 9b59d72f2de16c9e5be548d665c18780 301 Gene3D G3DSA:3.30.930.10 15 233 9.2E-104 T 22-04-2016 RPIC12D_RS19325 9b59d72f2de16c9e5be548d665c18780 301 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 19 301 53.779 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS19325 9b59d72f2de16c9e5be548d665c18780 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 94 114 1.1E-57 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS19325 9b59d72f2de16c9e5be548d665c18780 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 73 88 1.1E-57 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS19325 9b59d72f2de16c9e5be548d665c18780 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 125 149 1.1E-57 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS19325 9b59d72f2de16c9e5be548d665c18780 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 174 189 1.1E-57 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS19325 9b59d72f2de16c9e5be548d665c18780 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 151 171 1.1E-57 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS19325 9b59d72f2de16c9e5be548d665c18780 301 PANTHER PTHR30075 1 258 6.2E-205 T 22-04-2016 RPIC12D_RS19325 9b59d72f2de16c9e5be548d665c18780 301 PANTHER PTHR30075 274 301 6.2E-205 T 22-04-2016 RPIC12D_RS19325 9b59d72f2de16c9e5be548d665c18780 301 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 20 301 1.3E-133 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS19325 9b59d72f2de16c9e5be548d665c18780 301 Gene3D G3DSA:1.20.58.180 235 301 1.0E-18 T 22-04-2016 RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 Gene3D G3DSA:4.10.860.10 205 265 5.9E-18 T 22-04-2016 IPR001943 UVR domain GO:0005515 RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 Pfam PF02151 UvrB/uvrC motif 227 259 2.0E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 Gene3D G3DSA:1.10.150.20 603 657 5.6E-22 T 22-04-2016 RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 Pfam PF01541 GIY-YIG catalytic domain 42 116 2.7E-8 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 SUPERFAMILY SSF46600 213 265 8.37E-13 T 22-04-2016 IPR001943 UVR domain GO:0005515 RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 SUPERFAMILY SSF82771 39 123 8.76E-23 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 PANTHER PTHR30562 340 656 2.8E-220 T 22-04-2016 RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 PANTHER PTHR30562 31 313 2.8E-220 T 22-04-2016 RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 Gene3D G3DSA:3.40.1440.10 41 120 5.9E-7 T 22-04-2016 IPR027299 GIY-YIG domain RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 SUPERFAMILY SSF47781 555 657 4.45E-20 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 Pfam PF14520 Helix-hairpin-helix domain 606 656 6.9E-7 T 22-04-2016 RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 439 590 3.5E-45 T 22-04-2016 IPR001162 UvrC family homology region RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 Hamap MF_00203 UvrABC system protein C [uvrC]. 27 655 26.594 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 PANTHER PTHR30562:SF1 340 656 2.8E-220 T 22-04-2016 RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 PANTHER PTHR30562:SF1 31 313 2.8E-220 T 22-04-2016 RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 SMART SM00465 40 121 1.3E-19 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 SMART SM00278 636 655 180.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 SMART SM00278 604 623 1.3 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RPIC12D_RS05005 379cf66833c69151d2a6cab4a7512741 657 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 32 637 2.3E-165 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 RPIC12D_RS11090 b666f524f08f1fa72c52089118f6e5a0 206 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 36 205 3.0E-56 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RPIC12D_RS11090 b666f524f08f1fa72c52089118f6e5a0 206 PANTHER PTHR30069 13 206 1.2E-58 T 22-04-2016 RPIC12D_RS11090 b666f524f08f1fa72c52089118f6e5a0 206 Gene3D G3DSA:3.40.50.300 11 205 6.8E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11090 b666f524f08f1fa72c52089118f6e5a0 206 PIRSF PIRSF015617 9 206 1.1E-67 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RPIC12D_RS11090 b666f524f08f1fa72c52089118f6e5a0 206 SUPERFAMILY SSF52540 16 205 5.84E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11090 b666f524f08f1fa72c52089118f6e5a0 206 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 5 29 1.1E-10 T 22-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RPIC12D_RS11090 b666f524f08f1fa72c52089118f6e5a0 206 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 34 205 1.0E-64 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 SUPERFAMILY SSF56037 200 396 4.45E-67 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 Gene3D G3DSA:3.30.70.380 709 808 1.2E-22 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 Pfam PF03483 B3/4 domain 218 390 6.5E-60 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 SUPERFAMILY SSF54991 700 808 6.41E-21 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 Pfam PF01588 Putative tRNA binding domain 45 150 1.3E-23 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 SUPERFAMILY SSF50249 35 202 2.86E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 Gene3D G3DSA:2.40.50.140 42 159 1.7E-44 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 Gene3D G3DSA:3.30.56.20 405 478 6.4E-25 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 SMART SM00896 706 808 3.9E-32 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 SMART SM00874 406 474 2.1E-27 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 Gene3D G3DSA:3.30.56.10 1 38 1.0E-24 T 22-04-2016 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 Gene3D G3DSA:3.30.56.10 160 189 1.0E-24 T 22-04-2016 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 Gene3D G3DSA:3.50.40.10 203 396 6.1E-75 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 PANTHER PTHR10947:SF0 2 808 3.2E-259 T 22-04-2016 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 PANTHER PTHR10947 2 808 3.2E-259 T 22-04-2016 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 SUPERFAMILY SSF55681 470 695 3.73E-52 T 22-04-2016 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 802 43.531 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 Pfam PF03147 Ferredoxin-fold anticodon binding domain 706 808 3.0E-22 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 Pfam PF03484 tRNA synthetase B5 domain 409 474 4.6E-19 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 808 4.2E-229 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 Gene3D G3DSA:3.30.930.10 494 694 1.8E-63 T 22-04-2016 RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 SUPERFAMILY SSF46955 407 478 6.87E-19 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC12D_RS08260 705d00b6b6ba3127c69e80be12418f8f 809 SMART SM00873 217 390 7.6E-78 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RPIC12D_RS13610 4802e89a1e0d17b78f5a46b177069348 303 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 7 247 21.064 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 RPIC12D_RS13610 4802e89a1e0d17b78f5a46b177069348 303 Pfam PF03799 Cell division protein FtsQ 115 239 3.7E-21 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB RPIC12D_RS13610 4802e89a1e0d17b78f5a46b177069348 303 PANTHER PTHR35851 2 264 3.5E-36 T 22-04-2016 RPIC12D_RS13610 4802e89a1e0d17b78f5a46b177069348 303 Pfam PF08478 POTRA domain, FtsQ-type 53 110 9.8E-14 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type RPIC12D_RS13610 4802e89a1e0d17b78f5a46b177069348 303 PANTHER PTHR35851:SF1 2 264 3.5E-36 T 22-04-2016 RPIC12D_RS10165 5d641a8bfab43b9be4bce14508159e29 236 SUPERFAMILY SSF48498 113 221 2.22E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC12D_RS10165 5d641a8bfab43b9be4bce14508159e29 236 Gene3D G3DSA:1.10.357.10 32 224 3.4E-37 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC12D_RS10165 5d641a8bfab43b9be4bce14508159e29 236 Pfam PF00440 Bacterial regulatory proteins, tetR family 46 90 8.0E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS10165 5d641a8bfab43b9be4bce14508159e29 236 SUPERFAMILY SSF46689 34 118 1.13E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS10165 5d641a8bfab43b9be4bce14508159e29 236 PANTHER PTHR30055 29 200 3.9E-32 T 22-04-2016 RPIC12D_RS10165 5d641a8bfab43b9be4bce14508159e29 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 59 2.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS10165 5d641a8bfab43b9be4bce14508159e29 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 67 90 2.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS10165 5d641a8bfab43b9be4bce14508159e29 236 ProSitePatterns PS01081 TetR-type HTH domain signature. 58 88 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RPIC12D_RS15480 83faa02a1f4e1d07b0db47ae6a4405e1 139 PANTHER PTHR11527 34 139 4.1E-23 T 22-04-2016 IPR031107 Small heat shock protein HSP20 RPIC12D_RS15480 83faa02a1f4e1d07b0db47ae6a4405e1 139 PANTHER PTHR11527:SF118 34 139 4.1E-23 T 22-04-2016 RPIC12D_RS15480 83faa02a1f4e1d07b0db47ae6a4405e1 139 SUPERFAMILY SSF49764 29 137 8.02E-27 T 22-04-2016 IPR008978 HSP20-like chaperone RPIC12D_RS15480 83faa02a1f4e1d07b0db47ae6a4405e1 139 Gene3D G3DSA:2.60.40.790 14 137 6.6E-25 T 22-04-2016 IPR008978 HSP20-like chaperone RPIC12D_RS15480 83faa02a1f4e1d07b0db47ae6a4405e1 139 Pfam PF00011 Hsp20/alpha crystallin family 38 137 1.0E-16 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain RPIC12D_RS10030 487ed11309b1d0f4ca52abe503fa93d2 422 Gene3D G3DSA:3.30.1490.20 119 188 9.1E-33 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC12D_RS10030 487ed11309b1d0f4ca52abe503fa93d2 422 Gene3D G3DSA:3.90.600.10 329 420 8.0E-35 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC12D_RS10030 487ed11309b1d0f4ca52abe503fa93d2 422 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 294 4.4E-77 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC12D_RS10030 487ed11309b1d0f4ca52abe503fa93d2 422 PANTHER PTHR10520 1 422 2.5E-263 T 22-04-2016 RPIC12D_RS10030 487ed11309b1d0f4ca52abe503fa93d2 422 SUPERFAMILY SSF51246 327 420 3.45E-31 T 22-04-2016 IPR011054 Rudiment single hybrid motif RPIC12D_RS10030 487ed11309b1d0f4ca52abe503fa93d2 422 SUPERFAMILY SSF52440 1 101 9.78E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS10030 487ed11309b1d0f4ca52abe503fa93d2 422 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 420 7.6E-171 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC12D_RS10030 487ed11309b1d0f4ca52abe503fa93d2 422 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 418 3.6E-30 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC12D_RS10030 487ed11309b1d0f4ca52abe503fa93d2 422 SUPERFAMILY SSF56059 102 324 4.6E-66 T 22-04-2016 RPIC12D_RS10030 487ed11309b1d0f4ca52abe503fa93d2 422 Gene3D G3DSA:3.40.50.20 2 93 6.0E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS10030 487ed11309b1d0f4ca52abe503fa93d2 422 SMART SM01209 101 294 6.3E-136 T 22-04-2016 RPIC12D_RS10030 487ed11309b1d0f4ca52abe503fa93d2 422 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 1.8E-35 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC12D_RS10030 487ed11309b1d0f4ca52abe503fa93d2 422 Gene3D G3DSA:3.30.470.20 190 326 7.2E-61 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC12D_RS10030 487ed11309b1d0f4ca52abe503fa93d2 422 SMART SM01210 328 420 3.2E-53 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC12D_RS10030 487ed11309b1d0f4ca52abe503fa93d2 422 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 420 43.169 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC12D_RS05160 2febe438db0956d4c31dcbc78c027e8c 187 PANTHER PTHR23004:SF7 15 187 2.1E-59 T 22-04-2016 RPIC12D_RS05160 2febe438db0956d4c31dcbc78c027e8c 187 Pfam PF06041 Bacterial protein of unknown function (DUF924) 16 184 1.6E-46 T 22-04-2016 IPR010323 Protein of unknown function DUF924 RPIC12D_RS05160 2febe438db0956d4c31dcbc78c027e8c 187 SUPERFAMILY SSF48452 10 183 2.16E-58 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS05160 2febe438db0956d4c31dcbc78c027e8c 187 Gene3D G3DSA:1.20.58.320 10 87 2.4E-30 T 22-04-2016 RPIC12D_RS05160 2febe438db0956d4c31dcbc78c027e8c 187 Gene3D G3DSA:1.25.40.10 88 186 1.0E-28 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS05160 2febe438db0956d4c31dcbc78c027e8c 187 PANTHER PTHR23004 15 187 2.1E-59 T 22-04-2016 RPIC12D_RS17085 71387a1c5791299f8cf3e6a16bb1eeae 214 Pfam PF00072 Response regulator receiver domain 12 122 1.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS17085 71387a1c5791299f8cf3e6a16bb1eeae 214 SMART SM00421 150 207 8.8E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS17085 71387a1c5791299f8cf3e6a16bb1eeae 214 PANTHER PTHR26402 9 209 4.8E-67 T 22-04-2016 RPIC12D_RS17085 71387a1c5791299f8cf3e6a16bb1eeae 214 Gene3D G3DSA:3.40.50.2300 7 150 4.1E-36 T 22-04-2016 RPIC12D_RS17085 71387a1c5791299f8cf3e6a16bb1eeae 214 PANTHER PTHR26402:SF151 9 209 4.8E-67 T 22-04-2016 RPIC12D_RS17085 71387a1c5791299f8cf3e6a16bb1eeae 214 Gene3D G3DSA:1.10.10.10 151 211 8.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS17085 71387a1c5791299f8cf3e6a16bb1eeae 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.9E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS17085 71387a1c5791299f8cf3e6a16bb1eeae 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.9E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS17085 71387a1c5791299f8cf3e6a16bb1eeae 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.9E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS17085 71387a1c5791299f8cf3e6a16bb1eeae 214 SMART SM00448 9 122 8.7E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS17085 71387a1c5791299f8cf3e6a16bb1eeae 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 4.6E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS17085 71387a1c5791299f8cf3e6a16bb1eeae 214 SUPERFAMILY SSF52172 8 135 2.28E-33 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS17085 71387a1c5791299f8cf3e6a16bb1eeae 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS17085 71387a1c5791299f8cf3e6a16bb1eeae 214 SUPERFAMILY SSF46894 135 211 5.78E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS07480 541cf939293dbd07021b68625ae54f85 239 PANTHER PTHR24220:SF568 9 239 1.6E-90 T 22-04-2016 RPIC12D_RS07480 541cf939293dbd07021b68625ae54f85 239 PANTHER PTHR24220 9 239 1.6E-90 T 22-04-2016 RPIC12D_RS07480 541cf939293dbd07021b68625ae54f85 239 Gene3D G3DSA:3.40.50.300 4 232 3.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07480 541cf939293dbd07021b68625ae54f85 239 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS07480 541cf939293dbd07021b68625ae54f85 239 SMART SM00382 32 206 1.2E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS07480 541cf939293dbd07021b68625ae54f85 239 SUPERFAMILY SSF52540 6 233 4.66E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07480 541cf939293dbd07021b68625ae54f85 239 Pfam PF00005 ABC transporter 23 167 2.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS03475 7632544191b6a638a7dbc15b8095d128 618 PANTHER PTHR30629:SF4 1 433 1.2E-142 T 22-04-2016 RPIC12D_RS03475 7632544191b6a638a7dbc15b8095d128 618 Pfam PF13356 Domain of unknown function (DUF4102) 3 87 1.9E-17 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 RPIC12D_RS03475 7632544191b6a638a7dbc15b8095d128 618 Pfam PF00589 Phage integrase family 211 390 4.3E-17 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS03475 7632544191b6a638a7dbc15b8095d128 618 PANTHER PTHR30629 1 433 1.2E-142 T 22-04-2016 RPIC12D_RS03475 7632544191b6a638a7dbc15b8095d128 618 Gene3D G3DSA:1.10.150.130 98 196 1.9E-10 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC12D_RS03475 7632544191b6a638a7dbc15b8095d128 618 Gene3D G3DSA:1.10.443.10 211 397 1.8E-21 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS03475 7632544191b6a638a7dbc15b8095d128 618 SUPERFAMILY SSF56349 98 400 9.12E-48 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC12D_RS02765 00390103f332d75b31856167b77e1147 208 Gene3D G3DSA:1.20.1440.20 29 208 1.8E-64 T 22-04-2016 IPR023353 LemA-like domain RPIC12D_RS02765 00390103f332d75b31856167b77e1147 208 PANTHER PTHR34478 11 208 1.3E-88 T 22-04-2016 RPIC12D_RS02765 00390103f332d75b31856167b77e1147 208 Pfam PF04011 LemA family 23 208 1.0E-67 T 22-04-2016 IPR007156 LemA RPIC12D_RS02765 00390103f332d75b31856167b77e1147 208 PANTHER PTHR34478:SF2 11 208 1.3E-88 T 22-04-2016 RPIC12D_RS02765 00390103f332d75b31856167b77e1147 208 SUPERFAMILY SSF140478 38 195 6.8E-56 T 22-04-2016 IPR023353 LemA-like domain RPIC12D_RS02965 18212e90938a988fb638b4577b5b45a3 384 PANTHER PTHR30244 1 384 1.3E-145 T 22-04-2016 RPIC12D_RS02965 18212e90938a988fb638b4577b5b45a3 384 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 380 9.2E-132 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RPIC12D_RS02965 18212e90938a988fb638b4577b5b45a3 384 PIRSF PIRSF000390 1 384 1.3E-113 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RPIC12D_RS02965 18212e90938a988fb638b4577b5b45a3 384 PANTHER PTHR30244:SF3 1 384 1.3E-145 T 22-04-2016 RPIC12D_RS02965 18212e90938a988fb638b4577b5b45a3 384 SUPERFAMILY SSF53383 5 383 8.11E-119 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS02965 18212e90938a988fb638b4577b5b45a3 384 Gene3D G3DSA:3.40.640.10 5 256 2.3E-88 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS02965 18212e90938a988fb638b4577b5b45a3 384 Gene3D G3DSA:3.90.1150.10 259 383 9.3E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS15230 1bcf680a4896e714b65d914603c2e7c5 231 Gene3D G3DSA:3.40.630.30 33 169 2.9E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS15230 1bcf680a4896e714b65d914603c2e7c5 231 Pfam PF00583 Acetyltransferase (GNAT) family 97 168 4.2E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC12D_RS15230 1bcf680a4896e714b65d914603c2e7c5 231 SUPERFAMILY SSF55729 32 170 4.08E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS09245 402f40de9278c9614ec3707bd8625618 532 Gene3D G3DSA:3.90.76.10 46 194 9.0E-34 T 22-04-2016 RPIC12D_RS09245 402f40de9278c9614ec3707bd8625618 532 Gene3D G3DSA:3.10.105.10 312 503 7.1E-49 T 22-04-2016 RPIC12D_RS09245 402f40de9278c9614ec3707bd8625618 532 PANTHER PTHR30290 2 286 8.2E-115 T 22-04-2016 RPIC12D_RS09245 402f40de9278c9614ec3707bd8625618 532 PANTHER PTHR30290 303 515 8.2E-115 T 22-04-2016 RPIC12D_RS09245 402f40de9278c9614ec3707bd8625618 532 SUPERFAMILY SSF53850 33 515 2.17E-125 T 22-04-2016 RPIC12D_RS09245 402f40de9278c9614ec3707bd8625618 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 436 5.6E-95 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RPIC12D_RS09245 402f40de9278c9614ec3707bd8625618 532 Gene3D G3DSA:3.40.190.10 195 311 3.5E-41 T 22-04-2016 RPIC12D_RS09245 402f40de9278c9614ec3707bd8625618 532 PIRSF PIRSF002741 6 522 8.4E-99 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RPIC12D_RS07250 d664aed40aa4770dce054b43c844d206 445 Pfam PF00083 Sugar (and other) transporter 59 443 5.4E-28 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RPIC12D_RS07250 d664aed40aa4770dce054b43c844d206 445 Gene3D G3DSA:1.20.1250.20 23 219 2.9E-26 T 22-04-2016 RPIC12D_RS07250 d664aed40aa4770dce054b43c844d206 445 Gene3D G3DSA:1.20.1250.20 249 438 2.1E-14 T 22-04-2016 RPIC12D_RS07250 d664aed40aa4770dce054b43c844d206 445 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS07250 d664aed40aa4770dce054b43c844d206 445 ProSitePatterns PS00216 Sugar transport proteins signature 1. 84 100 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS07250 d664aed40aa4770dce054b43c844d206 445 ProSitePatterns PS00216 Sugar transport proteins signature 1. 313 329 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS07250 d664aed40aa4770dce054b43c844d206 445 PANTHER PTHR23508 12 443 3.5E-73 T 22-04-2016 RPIC12D_RS07250 d664aed40aa4770dce054b43c844d206 445 SUPERFAMILY SSF103473 15 441 1.2E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS04845 226f1578b9432c008804a0ceec0c92f8 373 Pfam PF13353 4Fe-4S single cluster domain 51 163 2.1E-9 T 22-04-2016 RPIC12D_RS04845 226f1578b9432c008804a0ceec0c92f8 373 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 35 373 41.505 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS04845 226f1578b9432c008804a0ceec0c92f8 373 PANTHER PTHR22960 27 323 3.5E-113 T 22-04-2016 RPIC12D_RS04845 226f1578b9432c008804a0ceec0c92f8 373 Pfam PF04055 Radical SAM superfamily 48 217 1.2E-29 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC12D_RS04845 226f1578b9432c008804a0ceec0c92f8 373 SUPERFAMILY SSF102114 35 342 7.06E-78 T 22-04-2016 RPIC12D_RS04845 226f1578b9432c008804a0ceec0c92f8 373 Gene3D G3DSA:3.20.20.70 35 341 2.0E-81 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS04845 226f1578b9432c008804a0ceec0c92f8 373 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 50 61 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS04845 226f1578b9432c008804a0ceec0c92f8 373 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 35 373 9.1E-118 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS04845 226f1578b9432c008804a0ceec0c92f8 373 Pfam PF06463 Molybdenum Cofactor Synthesis C 225 351 6.8E-38 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS04845 226f1578b9432c008804a0ceec0c92f8 373 SMART SM00729 44 258 8.6E-9 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC12D_RS08215 3d3f8e9dcbfb624293cc57d9c66dc506 476 PIRSF PIRSF006060 8 474 4.8E-95 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC12D_RS08215 3d3f8e9dcbfb624293cc57d9c66dc506 476 PANTHER PTHR11785:SF405 22 459 1.9E-218 T 22-04-2016 RPIC12D_RS08215 3d3f8e9dcbfb624293cc57d9c66dc506 476 PANTHER PTHR11785 22 459 1.9E-218 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC12D_RS08215 3d3f8e9dcbfb624293cc57d9c66dc506 476 Pfam PF13520 Amino acid permease 26 432 1.5E-66 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC12D_RS00570 eb48e0da072291314027ff83a8a4adda 664 Pfam PF02785 Biotin carboxylase C-terminal domain 346 451 4.0E-34 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC12D_RS00570 eb48e0da072291314027ff83a8a4adda 664 Pfam PF00289 Biotin carboxylase, N-terminal domain 8 115 1.0E-41 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RPIC12D_RS00570 eb48e0da072291314027ff83a8a4adda 664 PANTHER PTHR18866 8 662 1.1E-289 T 22-04-2016 RPIC12D_RS00570 eb48e0da072291314027ff83a8a4adda 664 PANTHER PTHR18866:SF102 8 662 1.1E-289 T 22-04-2016 RPIC12D_RS00570 eb48e0da072291314027ff83a8a4adda 664 Gene3D G3DSA:3.40.50.20 8 135 1.7E-48 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS00570 eb48e0da072291314027ff83a8a4adda 664 SUPERFAMILY SSF51230 589 661 7.33E-20 T 22-04-2016 IPR011053 Single hybrid motif RPIC12D_RS00570 eb48e0da072291314027ff83a8a4adda 664 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 159 173 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS00570 eb48e0da072291314027ff83a8a4adda 664 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 122 328 3.2E-73 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS00570 eb48e0da072291314027ff83a8a4adda 664 Gene3D G3DSA:3.30.1490.20 136 207 8.1E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC12D_RS00570 eb48e0da072291314027ff83a8a4adda 664 SUPERFAMILY SSF51246 341 454 7.32E-38 T 22-04-2016 IPR011054 Rudiment single hybrid motif RPIC12D_RS00570 eb48e0da072291314027ff83a8a4adda 664 Gene3D G3DSA:3.30.470.20 211 454 2.5E-95 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC12D_RS00570 eb48e0da072291314027ff83a8a4adda 664 SMART SM00878 346 450 9.3E-54 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC12D_RS00570 eb48e0da072291314027ff83a8a4adda 664 Gene3D G3DSA:2.40.50.100 591 662 1.9E-23 T 22-04-2016 RPIC12D_RS00570 eb48e0da072291314027ff83a8a4adda 664 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 292 299 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS00570 eb48e0da072291314027ff83a8a4adda 664 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 618 635 - T 22-04-2016 IPR001882 Biotin-binding site RPIC12D_RS00570 eb48e0da072291314027ff83a8a4adda 664 SUPERFAMILY SSF56059 121 332 2.12E-64 T 22-04-2016 RPIC12D_RS00570 eb48e0da072291314027ff83a8a4adda 664 SUPERFAMILY SSF52440 5 119 3.96E-45 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS00570 eb48e0da072291314027ff83a8a4adda 664 Pfam PF00364 Biotin-requiring enzyme 596 661 4.3E-16 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RPIC12D_RS10535 cfa2161350bdbd99ab07a74aedba0016 676 Gene3D G3DSA:1.10.8.60 525 588 5.6E-13 T 22-04-2016 RPIC12D_RS10535 cfa2161350bdbd99ab07a74aedba0016 676 Pfam PF02954 Bacterial regulatory protein, Fis family 628 667 5.7E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS10535 cfa2161350bdbd99ab07a74aedba0016 676 Gene3D G3DSA:1.10.10.60 626 666 6.1E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS10535 cfa2161350bdbd99ab07a74aedba0016 676 PANTHER PTHR32071 347 667 8.7E-127 T 22-04-2016 RPIC12D_RS10535 cfa2161350bdbd99ab07a74aedba0016 676 Pfam PF00158 Sigma-54 interaction domain 347 508 3.2E-65 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RPIC12D_RS10535 cfa2161350bdbd99ab07a74aedba0016 676 SUPERFAMILY SSF52540 348 583 2.28E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10535 cfa2161350bdbd99ab07a74aedba0016 676 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 367 380 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RPIC12D_RS10535 cfa2161350bdbd99ab07a74aedba0016 676 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 634 651 3.1E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS10535 cfa2161350bdbd99ab07a74aedba0016 676 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 651 671 3.1E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS10535 cfa2161350bdbd99ab07a74aedba0016 676 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 430 445 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RPIC12D_RS10535 cfa2161350bdbd99ab07a74aedba0016 676 Gene3D G3DSA:3.40.50.300 347 516 1.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10535 cfa2161350bdbd99ab07a74aedba0016 676 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 552 561 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RPIC12D_RS10535 cfa2161350bdbd99ab07a74aedba0016 676 SUPERFAMILY SSF46689 552 667 9.86E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS10535 cfa2161350bdbd99ab07a74aedba0016 676 SMART SM00382 363 529 3.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS10535 cfa2161350bdbd99ab07a74aedba0016 676 SUPERFAMILY SSF55781 64 204 2.94E-6 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS10535 cfa2161350bdbd99ab07a74aedba0016 676 Pfam PF01590 GAF domain 82 203 4.3E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC12D_RS07550 53c37879416f34a8951065d7db88c77f 826 SUPERFAMILY SSF69279 25 213 1.49E-42 T 22-04-2016 RPIC12D_RS07550 53c37879416f34a8951065d7db88c77f 826 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 519 624 6.0E-29 T 22-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain RPIC12D_RS07550 53c37879416f34a8951065d7db88c77f 826 SUPERFAMILY SSF69255 399 484 3.92E-26 T 22-04-2016 RPIC12D_RS07550 53c37879416f34a8951065d7db88c77f 826 Gene3D G3DSA:2.40.50.230 406 486 2.3E-29 T 22-04-2016 IPR006531 Gp5 N-terminal RPIC12D_RS07550 53c37879416f34a8951065d7db88c77f 826 SUPERFAMILY SSF69279 226 396 1.33E-35 T 22-04-2016 RPIC12D_RS07550 53c37879416f34a8951065d7db88c77f 826 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 650 796 1.7E-45 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal RPIC12D_RS07550 53c37879416f34a8951065d7db88c77f 826 PANTHER PTHR32305 630 643 1.6E-127 T 22-04-2016 RPIC12D_RS07550 53c37879416f34a8951065d7db88c77f 826 PANTHER PTHR32305 13 535 1.6E-127 T 22-04-2016 RPIC12D_RS07550 53c37879416f34a8951065d7db88c77f 826 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 25 534 2.5E-116 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RPIC12D_RS07550 53c37879416f34a8951065d7db88c77f 826 Pfam PF05954 Phage late control gene D protein (GPD) 40 364 3.5E-83 T 22-04-2016 RPIC12D_RS07550 53c37879416f34a8951065d7db88c77f 826 Gene3D G3DSA:3.55.50.10 126 217 1.8E-25 T 22-04-2016 RPIC12D_RS07550 53c37879416f34a8951065d7db88c77f 826 PANTHER PTHR32305:SF9 630 643 1.6E-127 T 22-04-2016 RPIC12D_RS07550 53c37879416f34a8951065d7db88c77f 826 PANTHER PTHR32305:SF9 13 535 1.6E-127 T 22-04-2016 RPIC12D_RS07550 53c37879416f34a8951065d7db88c77f 826 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 33 542 3.8E-96 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RPIC12D_RS09720 684f0e6de8302154503b6ab190a183b1 862 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 29 530 7.1E-123 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RPIC12D_RS09720 684f0e6de8302154503b6ab190a183b1 862 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 644 792 1.7E-36 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal RPIC12D_RS09720 684f0e6de8302154503b6ab190a183b1 862 Gene3D G3DSA:2.40.50.230 401 482 2.8E-34 T 22-04-2016 IPR006531 Gp5 N-terminal RPIC12D_RS09720 684f0e6de8302154503b6ab190a183b1 862 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 506 611 1.5E-31 T 22-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain RPIC12D_RS09720 684f0e6de8302154503b6ab190a183b1 862 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 36 532 5.3E-107 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RPIC12D_RS09720 684f0e6de8302154503b6ab190a183b1 862 SUPERFAMILY SSF69279 226 392 2.55E-33 T 22-04-2016 RPIC12D_RS09720 684f0e6de8302154503b6ab190a183b1 862 PANTHER PTHR32305:SF9 16 509 3.0E-128 T 22-04-2016 RPIC12D_RS09720 684f0e6de8302154503b6ab190a183b1 862 SUPERFAMILY SSF69279 29 212 7.23E-42 T 22-04-2016 RPIC12D_RS09720 684f0e6de8302154503b6ab190a183b1 862 Pfam PF05954 Phage late control gene D protein (GPD) 41 360 1.7E-87 T 22-04-2016 RPIC12D_RS09720 684f0e6de8302154503b6ab190a183b1 862 PANTHER PTHR32305 16 509 3.0E-128 T 22-04-2016 RPIC12D_RS09720 684f0e6de8302154503b6ab190a183b1 862 SUPERFAMILY SSF69255 395 482 4.18E-29 T 22-04-2016 RPIC12D_RS09720 684f0e6de8302154503b6ab190a183b1 862 SUPERFAMILY SSF69349 472 525 2.2E-7 T 22-04-2016 RPIC12D_RS09720 684f0e6de8302154503b6ab190a183b1 862 Gene3D G3DSA:3.55.50.10 127 217 5.9E-24 T 22-04-2016 RPIC12D_RS06560 c988feda3c8f34b1fcf46acdfb138884 246 PANTHER PTHR11735 4 129 8.1E-33 T 22-04-2016 RPIC12D_RS06560 c988feda3c8f34b1fcf46acdfb138884 246 SUPERFAMILY SSF53067 111 219 2.07E-17 T 22-04-2016 RPIC12D_RS06560 c988feda3c8f34b1fcf46acdfb138884 246 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 221 1.8E-54 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 RPIC12D_RS06560 c988feda3c8f34b1fcf46acdfb138884 246 PANTHER PTHR11735:SF11 4 129 8.1E-33 T 22-04-2016 RPIC12D_RS06560 c988feda3c8f34b1fcf46acdfb138884 246 Gene3D G3DSA:3.30.420.40 3 129 1.4E-38 T 22-04-2016 RPIC12D_RS06560 c988feda3c8f34b1fcf46acdfb138884 246 Pfam PF00814 Glycoprotease family 35 139 1.3E-25 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC12D_RS06560 c988feda3c8f34b1fcf46acdfb138884 246 SUPERFAMILY SSF53067 3 104 3.56E-25 T 22-04-2016 RPIC12D_RS01245 1676fd0c0b923ad87ebda62202779c1e 289 Pfam PF05726 Pirin C-terminal cupin domain 176 274 1.8E-25 T 22-04-2016 IPR008778 Pirin, C-terminal domain RPIC12D_RS01245 1676fd0c0b923ad87ebda62202779c1e 289 PANTHER PTHR13903 4 289 1.5E-105 T 22-04-2016 IPR012093 Pirin RPIC12D_RS01245 1676fd0c0b923ad87ebda62202779c1e 289 Pfam PF02678 Pirin 18 123 9.2E-37 T 22-04-2016 IPR003829 Pirin, N-terminal domain RPIC12D_RS01245 1676fd0c0b923ad87ebda62202779c1e 289 PANTHER PTHR13903:SF4 4 289 1.5E-105 T 22-04-2016 RPIC12D_RS01245 1676fd0c0b923ad87ebda62202779c1e 289 SUPERFAMILY SSF51182 4 286 5.24E-80 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS01245 1676fd0c0b923ad87ebda62202779c1e 289 PIRSF PIRSF006232 1 283 4.0E-86 T 22-04-2016 IPR012093 Pirin RPIC12D_RS01245 1676fd0c0b923ad87ebda62202779c1e 289 Gene3D G3DSA:2.60.120.10 8 245 5.1E-69 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS01350 0c559b4e9707e67a9b49e97681954028 167 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 35.901 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC12D_RS01350 0c559b4e9707e67a9b49e97681954028 167 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 58 2.9E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIC12D_RS01350 0c559b4e9707e67a9b49e97681954028 167 SUPERFAMILY SSF52374 3 156 1.25E-45 T 22-04-2016 RPIC12D_RS01350 0c559b4e9707e67a9b49e97681954028 167 Gene3D G3DSA:3.40.50.620 2 157 2.2E-54 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS01350 0c559b4e9707e67a9b49e97681954028 167 PANTHER PTHR21342 1 156 6.8E-75 T 22-04-2016 RPIC12D_RS01350 0c559b4e9707e67a9b49e97681954028 167 Pfam PF01467 Cytidylyltransferase-like 5 133 1.5E-17 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIC12D_RS01350 0c559b4e9707e67a9b49e97681954028 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 2.3E-48 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC12D_RS01350 0c559b4e9707e67a9b49e97681954028 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 2.3E-48 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC12D_RS01350 0c559b4e9707e67a9b49e97681954028 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 2.3E-48 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC12D_RS01350 0c559b4e9707e67a9b49e97681954028 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 2.3E-48 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC12D_RS01350 0c559b4e9707e67a9b49e97681954028 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 2.3E-48 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC12D_RS01350 0c559b4e9707e67a9b49e97681954028 167 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 156 2.1E-56 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC12D_RS01350 0c559b4e9707e67a9b49e97681954028 167 PANTHER PTHR21342:SF1 1 156 6.8E-75 T 22-04-2016 RPIC12D_RS13620 84758b5c1b8c16c58d98a063303e694e 483 Gene3D G3DSA:3.90.190.20 316 464 5.4E-52 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC12D_RS13620 84758b5c1b8c16c58d98a063303e694e 483 Gene3D G3DSA:3.40.50.720 6 92 1.4E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS13620 84758b5c1b8c16c58d98a063303e694e 483 SUPERFAMILY SSF53623 91 312 9.55E-71 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13620 84758b5c1b8c16c58d98a063303e694e 483 Pfam PF01225 Mur ligase family, catalytic domain 8 105 1.4E-25 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13620 84758b5c1b8c16c58d98a063303e694e 483 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 460 2.5E-164 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS13620 84758b5c1b8c16c58d98a063303e694e 483 SUPERFAMILY SSF51984 6 92 2.35E-28 T 22-04-2016 RPIC12D_RS13620 84758b5c1b8c16c58d98a063303e694e 483 PANTHER PTHR23135 1 457 4.1E-197 T 22-04-2016 RPIC12D_RS13620 84758b5c1b8c16c58d98a063303e694e 483 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 406 7.5E-18 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC12D_RS13620 84758b5c1b8c16c58d98a063303e694e 483 SUPERFAMILY SSF53244 313 459 1.37E-43 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC12D_RS13620 84758b5c1b8c16c58d98a063303e694e 483 Pfam PF08245 Mur ligase middle domain 110 294 7.5E-28 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13620 84758b5c1b8c16c58d98a063303e694e 483 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 468 43.306 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS13620 84758b5c1b8c16c58d98a063303e694e 483 PANTHER PTHR23135:SF5 1 457 4.1E-197 T 22-04-2016 RPIC12D_RS13620 84758b5c1b8c16c58d98a063303e694e 483 Gene3D G3DSA:3.40.1190.10 94 315 4.1E-82 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS11845 d7f9bfa178fbe90f53f181600ced6751 294 PANTHER PTHR12128:SF34 1 288 2.1E-76 T 22-04-2016 RPIC12D_RS11845 d7f9bfa178fbe90f53f181600ced6751 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 102 118 1.6E-18 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS11845 d7f9bfa178fbe90f53f181600ced6751 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 1.6E-18 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS11845 d7f9bfa178fbe90f53f181600ced6751 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 1.6E-18 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS11845 d7f9bfa178fbe90f53f181600ced6751 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 1.6E-18 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS11845 d7f9bfa178fbe90f53f181600ced6751 294 PIRSF PIRSF001365 1 293 1.8E-71 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS11845 d7f9bfa178fbe90f53f181600ced6751 294 Gene3D G3DSA:3.20.20.70 1 283 1.2E-85 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS11845 d7f9bfa178fbe90f53f181600ced6751 294 Pfam PF00701 Dihydrodipicolinate synthetase family 2 280 1.0E-60 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS11845 d7f9bfa178fbe90f53f181600ced6751 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 132 162 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS11845 d7f9bfa178fbe90f53f181600ced6751 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 281 44.043 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS11845 d7f9bfa178fbe90f53f181600ced6751 294 PANTHER PTHR12128 1 288 2.1E-76 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS11845 d7f9bfa178fbe90f53f181600ced6751 294 SMART SM01130 1 283 1.1E-91 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS11845 d7f9bfa178fbe90f53f181600ced6751 294 SUPERFAMILY SSF51569 1 282 1.04E-79 T 22-04-2016 RPIC12D_RS11845 d7f9bfa178fbe90f53f181600ced6751 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 9 278 4.1E-65 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS03570 756387c668131c93e00d6b6cc30275dd 344 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS03570 756387c668131c93e00d6b6cc30275dd 344 Pfam PF16074 Type IV Pilus-assembly protein W 224 341 1.9E-25 T 22-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 RPIC12D_RS07095 97455a98ca845bfebfbb8ec40ec5deb0 410 PANTHER PTHR39338 1 399 6.5E-89 T 22-04-2016 RPIC12D_RS07095 97455a98ca845bfebfbb8ec40ec5deb0 410 SUPERFAMILY SSF53300 219 346 2.07E-18 T 22-04-2016 IPR002035 von Willebrand factor, type A RPIC12D_RS07095 97455a98ca845bfebfbb8ec40ec5deb0 410 Gene3D G3DSA:3.40.50.410 220 324 7.8E-7 T 22-04-2016 IPR002035 von Willebrand factor, type A RPIC12D_RS07095 97455a98ca845bfebfbb8ec40ec5deb0 410 SMART SM00327 217 382 7.3E-4 T 22-04-2016 IPR002035 von Willebrand factor, type A RPIC12D_RS07095 97455a98ca845bfebfbb8ec40ec5deb0 410 PANTHER PTHR39338:SF1 1 399 6.5E-89 T 22-04-2016 RPIC12D_RS07095 97455a98ca845bfebfbb8ec40ec5deb0 410 Pfam PF05762 VWA domain containing CoxE-like protein 161 381 3.0E-80 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like RPIC12D_RS07095 97455a98ca845bfebfbb8ec40ec5deb0 410 PIRSF PIRSF010256 1 391 8.2E-144 T 22-04-2016 IPR011195 Uncharacterised conserved protein UCP010256 RPIC12D_RS03035 641cbca96ea511c6436a1e6d015e6ecc 293 Pfam PF02673 Bacitracin resistance protein BacA 9 279 1.7E-82 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RPIC12D_RS03035 641cbca96ea511c6436a1e6d015e6ecc 293 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 277 1.7E-70 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RPIC12D_RS03035 641cbca96ea511c6436a1e6d015e6ecc 293 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 284 18.161 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RPIC12D_RS03035 641cbca96ea511c6436a1e6d015e6ecc 293 PANTHER PTHR30622:SF3 2 136 4.9E-124 T 22-04-2016 RPIC12D_RS03035 641cbca96ea511c6436a1e6d015e6ecc 293 PANTHER PTHR30622:SF3 156 292 4.9E-124 T 22-04-2016 RPIC12D_RS03035 641cbca96ea511c6436a1e6d015e6ecc 293 PANTHER PTHR30622 2 136 4.9E-124 T 22-04-2016 RPIC12D_RS03035 641cbca96ea511c6436a1e6d015e6ecc 293 PANTHER PTHR30622 156 292 4.9E-124 T 22-04-2016 RPIC12D_RS09785 ac09d41f2081122adc073e8553150fab 338 Gene3D G3DSA:3.30.540.10 4 194 2.8E-76 T 22-04-2016 RPIC12D_RS09785 ac09d41f2081122adc073e8553150fab 338 PIRSF PIRSF500210 1 336 5.8E-129 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC12D_RS09785 ac09d41f2081122adc073e8553150fab 338 PIRSF PIRSF000904 1 337 8.9E-128 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RPIC12D_RS09785 ac09d41f2081122adc073e8553150fab 338 Gene3D G3DSA:3.40.190.80 196 332 1.3E-58 T 22-04-2016 RPIC12D_RS09785 ac09d41f2081122adc073e8553150fab 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 193 4.0E-65 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC12D_RS09785 ac09d41f2081122adc073e8553150fab 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 333 47.543 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RPIC12D_RS09785 ac09d41f2081122adc073e8553150fab 338 SUPERFAMILY SSF56655 2 331 4.19E-118 T 22-04-2016 RPIC12D_RS09785 ac09d41f2081122adc073e8553150fab 338 PANTHER PTHR11556 4 336 5.4E-160 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RPIC12D_RS09785 ac09d41f2081122adc073e8553150fab 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 9.4E-73 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC12D_RS09785 ac09d41f2081122adc073e8553150fab 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 66 92 9.4E-73 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC12D_RS09785 ac09d41f2081122adc073e8553150fab 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 9.4E-73 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC12D_RS09785 ac09d41f2081122adc073e8553150fab 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 9.4E-73 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC12D_RS09785 ac09d41f2081122adc073e8553150fab 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 9.4E-73 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC12D_RS09785 ac09d41f2081122adc073e8553150fab 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 29 56 9.4E-73 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC12D_RS09700 58182c437f320483a60544c2e1d45cc4 444 Gene3D G3DSA:3.20.20.140 85 379 3.4E-107 T 22-04-2016 RPIC12D_RS09700 58182c437f320483a60544c2e1d45cc4 444 SUPERFAMILY SSF51338 31 93 6.34E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS09700 58182c437f320483a60544c2e1d45cc4 444 Pfam PF01979 Amidohydrolase family 75 434 8.3E-56 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RPIC12D_RS09700 58182c437f320483a60544c2e1d45cc4 444 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 33 433 4.2E-176 T 22-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 RPIC12D_RS09700 58182c437f320483a60544c2e1d45cc4 444 Gene3D G3DSA:2.30.40.10 43 84 8.5E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS09700 58182c437f320483a60544c2e1d45cc4 444 PANTHER PTHR11271 28 434 8.2E-140 T 22-04-2016 RPIC12D_RS09700 58182c437f320483a60544c2e1d45cc4 444 PANTHER PTHR11271:SF6 28 434 8.2E-140 T 22-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 RPIC12D_RS09700 58182c437f320483a60544c2e1d45cc4 444 SUPERFAMILY SSF51556 77 380 2.6E-96 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 4 599 4.9E-288 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 SUPERFAMILY SSF50447 151 299 2.78E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 SUPERFAMILY SSF54980 398 513 7.67E-28 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 153 1.5E-23 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 Gene3D G3DSA:3.30.70.870 304 399 1.1E-38 T 22-04-2016 RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 Pfam PF00679 Elongation factor G C-terminus 396 477 3.0E-22 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 PANTHER PTHR23115:SF14 4 593 2.4E-280 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 SUPERFAMILY SSF52540 4 206 5.75E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 Pfam PF03144 Elongation factor Tu domain 2 218 289 3.4E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 Gene3D G3DSA:3.40.50.300 3 204 6.8E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 PRINTS PR00315 GTP-binding elongation factor signature 122 131 5.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 PRINTS PR00315 GTP-binding elongation factor signature 50 58 5.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 PRINTS PR00315 GTP-binding elongation factor signature 6 19 5.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 PRINTS PR00315 GTP-binding elongation factor signature 86 97 5.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 PRINTS PR00315 GTP-binding elongation factor signature 70 80 5.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 PANTHER PTHR23115 4 593 2.4E-280 T 22-04-2016 RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 Gene3D G3DSA:2.40.30.10 205 303 5.6E-23 T 22-04-2016 RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 Pfam PF00009 Elongation factor Tu GTP binding domain 4 194 3.4E-55 T 22-04-2016 RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 SUPERFAMILY SSF54980 302 387 6.47E-13 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 Gene3D G3DSA:2.40.50.250 483 577 1.3E-41 T 22-04-2016 RPIC12D_RS06120 8e44803d49c8fa6ec648d64d405dc897 606 Gene3D G3DSA:3.30.70.240 400 478 5.2E-32 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RPIC12D_RS13705 14862e9f0f59a88dd2e7b6d4855f547f 698 Pfam PF00384 Molybdopterin oxidoreductase 61 478 3.4E-49 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RPIC12D_RS13705 14862e9f0f59a88dd2e7b6d4855f547f 698 SMART SM00926 3 58 1.2E-19 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RPIC12D_RS13705 14862e9f0f59a88dd2e7b6d4855f547f 698 SUPERFAMILY SSF50692 533 693 7.46E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RPIC12D_RS13705 14862e9f0f59a88dd2e7b6d4855f547f 698 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 4 58 4.6E-13 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RPIC12D_RS13705 14862e9f0f59a88dd2e7b6d4855f547f 698 Gene3D G3DSA:3.40.50.740 326 485 4.0E-44 T 22-04-2016 RPIC12D_RS13705 14862e9f0f59a88dd2e7b6d4855f547f 698 Gene3D G3DSA:3.40.50.740 62 141 4.0E-44 T 22-04-2016 RPIC12D_RS13705 14862e9f0f59a88dd2e7b6d4855f547f 698 PANTHER PTHR11615 4 693 7.8E-195 T 22-04-2016 RPIC12D_RS13705 14862e9f0f59a88dd2e7b6d4855f547f 698 Gene3D G3DSA:2.40.40.20 551 694 1.6E-44 T 22-04-2016 RPIC12D_RS13705 14862e9f0f59a88dd2e7b6d4855f547f 698 Gene3D G3DSA:3.40.228.10 142 325 3.0E-57 T 22-04-2016 RPIC12D_RS13705 14862e9f0f59a88dd2e7b6d4855f547f 698 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 423 440 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RPIC12D_RS13705 14862e9f0f59a88dd2e7b6d4855f547f 698 SUPERFAMILY SSF53706 4 566 8.77E-168 T 22-04-2016 RPIC12D_RS13705 14862e9f0f59a88dd2e7b6d4855f547f 698 Pfam PF01568 Molydopterin dinucleotide binding domain 579 687 1.1E-24 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RPIC12D_RS13705 14862e9f0f59a88dd2e7b6d4855f547f 698 Gene3D G3DSA:2.20.25.90 2 61 1.3E-17 T 22-04-2016 RPIC12D_RS13705 14862e9f0f59a88dd2e7b6d4855f547f 698 PANTHER PTHR11615:SF127 4 693 7.8E-195 T 22-04-2016 RPIC12D_RS01805 afc00974527020e9cd8fe2d3a4dac98c 595 SUPERFAMILY SSF56645 37 293 2.49E-60 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC12D_RS01805 afc00974527020e9cd8fe2d3a4dac98c 595 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 272 1.2E-17 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC12D_RS01805 afc00974527020e9cd8fe2d3a4dac98c 595 Gene3D G3DSA:1.20.140.10 270 467 3.9E-53 T 22-04-2016 RPIC12D_RS01805 afc00974527020e9cd8fe2d3a4dac98c 595 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 35 1.2E-12 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RPIC12D_RS01805 afc00974527020e9cd8fe2d3a4dac98c 595 Gene3D G3DSA:2.40.110.10 162 269 4.6E-27 T 22-04-2016 RPIC12D_RS01805 afc00974527020e9cd8fe2d3a4dac98c 595 PANTHER PTHR10909 3 477 4.0E-227 T 22-04-2016 RPIC12D_RS01805 afc00974527020e9cd8fe2d3a4dac98c 595 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 41 158 3.0E-13 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS01805 afc00974527020e9cd8fe2d3a4dac98c 595 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 3.0E-20 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS01805 afc00974527020e9cd8fe2d3a4dac98c 595 SUPERFAMILY SSF47203 288 474 4.99E-52 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS01805 afc00974527020e9cd8fe2d3a4dac98c 595 Gene3D G3DSA:1.10.540.10 39 160 2.9E-19 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS01805 afc00974527020e9cd8fe2d3a4dac98c 595 PANTHER PTHR10909:SF296 3 477 4.0E-227 T 22-04-2016 RPIC12D_RS01805 afc00974527020e9cd8fe2d3a4dac98c 595 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 470 590 2.0E-33 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RPIC12D_RS02820 f835d8e81256b29e0dc25777bf66e034 248 SUPERFAMILY SSF55120 67 232 1.02E-41 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS02820 f835d8e81256b29e0dc25777bf66e034 248 Gene3D G3DSA:3.10.290.10 11 70 2.9E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS02820 f835d8e81256b29e0dc25777bf66e034 248 SUPERFAMILY SSF55174 7 73 7.46E-7 T 22-04-2016 RPIC12D_RS02820 f835d8e81256b29e0dc25777bf66e034 248 Pfam PF00849 RNA pseudouridylate synthase 68 199 1.4E-15 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS02820 f835d8e81256b29e0dc25777bf66e034 248 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RPIC12D_RS02820 f835d8e81256b29e0dc25777bf66e034 248 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 229 6.0E-42 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RPIC12D_RS02820 f835d8e81256b29e0dc25777bf66e034 248 PANTHER PTHR21600 1 237 2.9E-53 T 22-04-2016 RPIC12D_RS01810 0d8911d42967dba29b5a7ad0e966ec22 826 Gene3D G3DSA:1.10.1040.10 373 425 1.0E-6 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC12D_RS01810 0d8911d42967dba29b5a7ad0e966ec22 826 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 25 207 2.0E-46 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC12D_RS01810 0d8911d42967dba29b5a7ad0e966ec22 826 SUPERFAMILY SSF48179 208 322 1.11E-20 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS01810 0d8911d42967dba29b5a7ad0e966ec22 826 SUPERFAMILY SSF52096 510 822 1.64E-32 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS01810 0d8911d42967dba29b5a7ad0e966ec22 826 Gene3D G3DSA:1.10.1040.10 211 310 4.5E-15 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC12D_RS01810 0d8911d42967dba29b5a7ad0e966ec22 826 PANTHER PTHR23309 16 480 4.4E-120 T 22-04-2016 RPIC12D_RS01810 0d8911d42967dba29b5a7ad0e966ec22 826 Gene3D G3DSA:3.40.50.720 21 210 5.9E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS01810 0d8911d42967dba29b5a7ad0e966ec22 826 Gene3D G3DSA:3.90.226.10 511 654 4.1E-22 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS01810 0d8911d42967dba29b5a7ad0e966ec22 826 SUPERFAMILY SSF48179 359 480 1.45E-17 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS01810 0d8911d42967dba29b5a7ad0e966ec22 826 PANTHER PTHR23309:SF2 16 480 4.4E-120 T 22-04-2016 RPIC12D_RS01810 0d8911d42967dba29b5a7ad0e966ec22 826 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 210 309 6.3E-13 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC12D_RS01810 0d8911d42967dba29b5a7ad0e966ec22 826 Pfam PF00378 Enoyl-CoA hydratase/isomerase 522 653 2.5E-9 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC12D_RS01810 0d8911d42967dba29b5a7ad0e966ec22 826 SUPERFAMILY SSF51735 21 208 1.06E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS12495 5ebc4fb646868d44cd9dc6e4172bce35 296 Pfam PF03466 LysR substrate binding domain 94 292 1.1E-33 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS12495 5ebc4fb646868d44cd9dc6e4172bce35 296 Gene3D G3DSA:3.40.190.10 185 261 9.1E-9 T 22-04-2016 RPIC12D_RS12495 5ebc4fb646868d44cd9dc6e4172bce35 296 SUPERFAMILY SSF46785 7 86 1.02E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12495 5ebc4fb646868d44cd9dc6e4172bce35 296 Gene3D G3DSA:1.10.10.10 8 88 9.4E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12495 5ebc4fb646868d44cd9dc6e4172bce35 296 PANTHER PTHR30537:SF26 3 292 2.1E-82 T 22-04-2016 RPIC12D_RS12495 5ebc4fb646868d44cd9dc6e4172bce35 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 6.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12495 5ebc4fb646868d44cd9dc6e4172bce35 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 6.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12495 5ebc4fb646868d44cd9dc6e4172bce35 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 6.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12495 5ebc4fb646868d44cd9dc6e4172bce35 296 Gene3D G3DSA:3.40.190.10 97 184 1.5E-22 T 22-04-2016 RPIC12D_RS12495 5ebc4fb646868d44cd9dc6e4172bce35 296 PANTHER PTHR30537 3 292 2.1E-82 T 22-04-2016 RPIC12D_RS12495 5ebc4fb646868d44cd9dc6e4172bce35 296 SUPERFAMILY SSF53850 95 293 1.47E-32 T 22-04-2016 RPIC12D_RS12495 5ebc4fb646868d44cd9dc6e4172bce35 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 5.2E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS01855 f93fa2d4d14b40538adadf4199579ef2 242 SUPERFAMILY SSF161098 23 219 6.93E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS01855 f93fa2d4d14b40538adadf4199579ef2 242 Gene3D G3DSA:1.10.3720.10 20 232 1.5E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS01855 f93fa2d4d14b40538adadf4199579ef2 242 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 234 1.7E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS01855 f93fa2d4d14b40538adadf4199579ef2 242 PANTHER PTHR30085:SF4 1 240 5.0E-122 T 22-04-2016 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0006865|GO:0016021|GO:0043190 RPIC12D_RS01855 f93fa2d4d14b40538adadf4199579ef2 242 PANTHER PTHR30085 1 240 5.0E-122 T 22-04-2016 RPIC12D_RS01855 f93fa2d4d14b40538adadf4199579ef2 242 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 120 3.1E-19 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS12175 74e56dd0ea4aca9bd378badfaa163f9f 325 PANTHER PTHR11088 1 315 1.8E-107 T 22-04-2016 RPIC12D_RS12175 74e56dd0ea4aca9bd378badfaa163f9f 325 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 11 317 29.119 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RPIC12D_RS12175 74e56dd0ea4aca9bd378badfaa163f9f 325 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 302 4.9E-90 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RPIC12D_RS12175 74e56dd0ea4aca9bd378badfaa163f9f 325 Pfam PF01715 IPP transferase 45 297 5.4E-87 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RPIC12D_RS12175 74e56dd0ea4aca9bd378badfaa163f9f 325 Gene3D G3DSA:1.10.287.890 214 294 4.6E-32 T 22-04-2016 RPIC12D_RS12175 74e56dd0ea4aca9bd378badfaa163f9f 325 SUPERFAMILY SSF52540 13 156 2.73E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12175 74e56dd0ea4aca9bd378badfaa163f9f 325 Gene3D G3DSA:3.40.50.300 9 178 1.9E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 Gene3D G3DSA:2.40.50.140 662 743 1.2E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 Hamap MF_01895 Ribonuclease R [rnr]. 28 743 57.168 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 Pfam PF00773 RNB domain 249 580 3.8E-105 T 22-04-2016 RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 SMART SM00357 75 134 2.3E-8 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 PANTHER PTHR23355 12 579 2.8E-234 T 22-04-2016 RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 PANTHER PTHR23355 606 745 2.8E-234 T 22-04-2016 RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 ProSitePatterns PS01175 Ribonuclease II family signature. 548 572 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 SUPERFAMILY SSF50249 662 742 2.42E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 SMART SM00955 249 581 5.4E-187 T 22-04-2016 RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 PANTHER PTHR23355:SF9 12 579 2.8E-234 T 22-04-2016 RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 PANTHER PTHR23355:SF9 606 745 2.8E-234 T 22-04-2016 RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 Pfam PF08206 Ribonuclease B OB domain 76 133 1.4E-22 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 64 743 1.0E-210 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 SUPERFAMILY SSF50249 56 136 1.65E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 Pfam PF00575 S1 RNA binding domain 659 740 7.7E-12 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 SMART SM00316 660 743 8.1E-13 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 TIGRFAM TIGR02063 RNase_R: ribonuclease R 9 584 4.5E-211 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 Gene3D G3DSA:1.10.10.10 12 67 3.3E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 SUPERFAMILY SSF50249 527 582 2.6E-144 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 SUPERFAMILY SSF50249 620 660 2.6E-144 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS05860 842ee6864c25fb095e58cd0b81e1b9b1 864 SUPERFAMILY SSF50249 176 491 2.6E-144 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04280 db2e19bd5643e22540213149d9e0314c 300 PANTHER PTHR10314:SF100 1 298 4.2E-161 T 22-04-2016 RPIC12D_RS04280 db2e19bd5643e22540213149d9e0314c 300 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 287 2.2E-65 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC12D_RS04280 db2e19bd5643e22540213149d9e0314c 300 TIGRFAM TIGR01138 cysM: cysteine synthase B 5 298 3.5E-135 T 22-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 RPIC12D_RS04280 db2e19bd5643e22540213149d9e0314c 300 Gene3D G3DSA:3.40.50.1100 46 146 1.3E-38 T 22-04-2016 RPIC12D_RS04280 db2e19bd5643e22540213149d9e0314c 300 TIGRFAM TIGR01136 cysKM: cysteine synthase 6 298 2.1E-116 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 RPIC12D_RS04280 db2e19bd5643e22540213149d9e0314c 300 SUPERFAMILY SSF53686 5 298 1.7E-88 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC12D_RS04280 db2e19bd5643e22540213149d9e0314c 300 PANTHER PTHR10314 1 298 4.2E-161 T 22-04-2016 RPIC12D_RS04280 db2e19bd5643e22540213149d9e0314c 300 Gene3D G3DSA:3.40.50.1100 2 45 7.7E-79 T 22-04-2016 RPIC12D_RS04280 db2e19bd5643e22540213149d9e0314c 300 Gene3D G3DSA:3.40.50.1100 152 299 7.7E-79 T 22-04-2016 RPIC12D_RS04280 db2e19bd5643e22540213149d9e0314c 300 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 36 54 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 RPIC12D_RS15750 48d112390603a2dbd11bb772d6d5d695 424 PANTHER PTHR11014 9 408 2.8E-53 T 22-04-2016 RPIC12D_RS15750 48d112390603a2dbd11bb772d6d5d695 424 Pfam PF07687 Peptidase dimerisation domain 208 318 3.7E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS15750 48d112390603a2dbd11bb772d6d5d695 424 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 97 106 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RPIC12D_RS15750 48d112390603a2dbd11bb772d6d5d695 424 Pfam PF01546 Peptidase family M20/M25/M40 99 417 1.9E-24 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC12D_RS15750 48d112390603a2dbd11bb772d6d5d695 424 SUPERFAMILY SSF55031 211 329 4.19E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS15750 48d112390603a2dbd11bb772d6d5d695 424 Gene3D G3DSA:3.40.630.10 359 421 6.2E-45 T 22-04-2016 RPIC12D_RS15750 48d112390603a2dbd11bb772d6d5d695 424 Gene3D G3DSA:3.40.630.10 23 219 6.2E-45 T 22-04-2016 RPIC12D_RS15750 48d112390603a2dbd11bb772d6d5d695 424 Gene3D G3DSA:3.30.70.360 220 317 9.5E-29 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS15750 48d112390603a2dbd11bb772d6d5d695 424 SUPERFAMILY SSF53187 14 210 1.45E-45 T 22-04-2016 RPIC12D_RS15750 48d112390603a2dbd11bb772d6d5d695 424 SUPERFAMILY SSF53187 335 418 1.45E-45 T 22-04-2016 RPIC12D_RS07640 97b986c4a809fecbcd76802574a2eda0 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 195 0.0049 T 22-04-2016 RPIC12D_RS07640 97b986c4a809fecbcd76802574a2eda0 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.001682E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07640 97b986c4a809fecbcd76802574a2eda0 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.001682E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07640 97b986c4a809fecbcd76802574a2eda0 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 1.001682E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07640 97b986c4a809fecbcd76802574a2eda0 254 Gene3D G3DSA:3.40.50.720 8 253 2.6E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS07640 97b986c4a809fecbcd76802574a2eda0 254 PANTHER PTHR24322 159 190 3.0E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07640 97b986c4a809fecbcd76802574a2eda0 254 PANTHER PTHR24322 11 143 3.0E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07640 97b986c4a809fecbcd76802574a2eda0 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 252 2.9E-54 T 22-04-2016 RPIC12D_RS07640 97b986c4a809fecbcd76802574a2eda0 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 3.890835E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07640 97b986c4a809fecbcd76802574a2eda0 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 3.890835E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07640 97b986c4a809fecbcd76802574a2eda0 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 3.890835E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07640 97b986c4a809fecbcd76802574a2eda0 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.890835E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07640 97b986c4a809fecbcd76802574a2eda0 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 3.890835E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07640 97b986c4a809fecbcd76802574a2eda0 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 3.890835E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07640 97b986c4a809fecbcd76802574a2eda0 254 SUPERFAMILY SSF51735 8 253 4.06E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS06025 e95a19601a199198492edc1fcbe1bdb5 227 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 11 190 3.7E-82 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO RPIC12D_RS06025 e95a19601a199198492edc1fcbe1bdb5 227 Gene3D G3DSA:1.10.760.10 22 203 1.0E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS06025 e95a19601a199198492edc1fcbe1bdb5 227 PANTHER PTHR10422 27 167 1.0E-87 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS06025 e95a19601a199198492edc1fcbe1bdb5 227 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 11 187 5.0E-84 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO RPIC12D_RS06025 e95a19601a199198492edc1fcbe1bdb5 227 PANTHER PTHR10422:SF23 27 167 1.0E-87 T 22-04-2016 RPIC12D_RS06025 e95a19601a199198492edc1fcbe1bdb5 227 SUPERFAMILY SSF46626 24 202 1.6E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS02800 316730774bdfa695e3820339b3d068f5 181 SUPERFAMILY SSF50341 33 174 2.62E-21 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RPIC12D_RS02800 316730774bdfa695e3820339b3d068f5 181 SMART SM00260 32 168 2.3E-4 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RPIC12D_RS02800 316730774bdfa695e3820339b3d068f5 181 Pfam PF01584 CheW-like domain 37 170 1.4E-20 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RPIC12D_RS20870 ec6a51a18652f54126953dd48b39cf89 253 Pfam PF00294 pfkB family carbohydrate kinase 17 250 5.7E-36 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB RPIC12D_RS20870 ec6a51a18652f54126953dd48b39cf89 253 PANTHER PTHR10584 1 253 3.5E-76 T 22-04-2016 RPIC12D_RS20870 ec6a51a18652f54126953dd48b39cf89 253 SUPERFAMILY SSF53613 15 251 2.76E-57 T 22-04-2016 IPR029056 Ribokinase-like RPIC12D_RS20870 ec6a51a18652f54126953dd48b39cf89 253 Gene3D G3DSA:3.40.1190.20 11 251 1.6E-62 T 22-04-2016 IPR029056 Ribokinase-like RPIC12D_RS20870 ec6a51a18652f54126953dd48b39cf89 253 PANTHER PTHR10584:SF186 1 253 3.5E-76 T 22-04-2016 RPIC12D_RS18040 74b8f63cdf7c3913366c21ce67a0958e 490 PANTHER PTHR11956:SF6 6 490 3.3E-176 T 22-04-2016 RPIC12D_RS18040 74b8f63cdf7c3913366c21ce67a0958e 490 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 5 490 4.6E-106 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS18040 74b8f63cdf7c3913366c21ce67a0958e 490 Pfam PF05746 DALR anticodon binding domain 371 490 1.5E-34 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RPIC12D_RS18040 74b8f63cdf7c3913366c21ce67a0958e 490 SUPERFAMILY SSF47323 366 489 9.16E-34 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS18040 74b8f63cdf7c3913366c21ce67a0958e 490 Gene3D G3DSA:1.10.730.10 375 490 2.9E-42 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS18040 74b8f63cdf7c3913366c21ce67a0958e 490 PRINTS PR01038 Arginyl-tRNA synthetase signature 20 35 1.5E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS18040 74b8f63cdf7c3913366c21ce67a0958e 490 PRINTS PR01038 Arginyl-tRNA synthetase signature 59 72 1.5E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS18040 74b8f63cdf7c3913366c21ce67a0958e 490 PRINTS PR01038 Arginyl-tRNA synthetase signature 208 229 1.5E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS18040 74b8f63cdf7c3913366c21ce67a0958e 490 PRINTS PR01038 Arginyl-tRNA synthetase signature 35 51 1.5E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS18040 74b8f63cdf7c3913366c21ce67a0958e 490 SUPERFAMILY SSF52374 16 302 2.82E-80 T 22-04-2016 RPIC12D_RS18040 74b8f63cdf7c3913366c21ce67a0958e 490 SUPERFAMILY SSF52374 333 381 2.82E-80 T 22-04-2016 RPIC12D_RS18040 74b8f63cdf7c3913366c21ce67a0958e 490 PANTHER PTHR11956 6 490 3.3E-176 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS18040 74b8f63cdf7c3913366c21ce67a0958e 490 Gene3D G3DSA:3.40.50.620 14 374 1.3E-106 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS18040 74b8f63cdf7c3913366c21ce67a0958e 490 Pfam PF00750 tRNA synthetases class I (R) 5 310 1.5E-19 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS18040 74b8f63cdf7c3913366c21ce67a0958e 490 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 30 39 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS18040 74b8f63cdf7c3913366c21ce67a0958e 490 SMART SM00836 371 490 7.6E-44 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RPIC12D_RS00055 75b721c738801435185723f8ad9b8691 254 SUPERFAMILY SSF48008 96 226 1.33E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC12D_RS00055 75b721c738801435185723f8ad9b8691 254 SMART SM00895 98 222 2.3E-19 T 22-04-2016 IPR011711 GntR, C-terminal RPIC12D_RS00055 75b721c738801435185723f8ad9b8691 254 PANTHER PTHR11751 92 114 1.7E-22 T 22-04-2016 RPIC12D_RS00055 75b721c738801435185723f8ad9b8691 254 PANTHER PTHR11751 8 70 1.7E-22 T 22-04-2016 RPIC12D_RS00055 75b721c738801435185723f8ad9b8691 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 67 8.2E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS00055 75b721c738801435185723f8ad9b8691 254 SUPERFAMILY SSF46785 6 71 2.63E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00055 75b721c738801435185723f8ad9b8691 254 SMART SM00345 8 67 2.3E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS00055 75b721c738801435185723f8ad9b8691 254 Pfam PF07729 FCD domain 98 220 1.2E-23 T 22-04-2016 IPR011711 GntR, C-terminal RPIC12D_RS00055 75b721c738801435185723f8ad9b8691 254 Gene3D G3DSA:1.10.10.10 5 68 3.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00055 75b721c738801435185723f8ad9b8691 254 Gene3D G3DSA:1.20.120.530 96 226 4.0E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC12D_RS00055 75b721c738801435185723f8ad9b8691 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 6.6E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS00055 75b721c738801435185723f8ad9b8691 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 6.6E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS00520 18bbf7bc493cd84342d0bfedfaece3c7 308 SUPERFAMILY SSF53474 18 308 9.83E-71 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS00520 18bbf7bc493cd84342d0bfedfaece3c7 308 Gene3D G3DSA:3.40.50.1820 22 307 3.6E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS00520 18bbf7bc493cd84342d0bfedfaece3c7 308 Pfam PF00561 alpha/beta hydrolase fold 43 159 4.7E-18 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS00520 18bbf7bc493cd84342d0bfedfaece3c7 308 PANTHER PTHR10992:SF778 27 308 7.1E-62 T 22-04-2016 RPIC12D_RS00520 18bbf7bc493cd84342d0bfedfaece3c7 308 PANTHER PTHR10992 27 308 7.1E-62 T 22-04-2016 RPIC12D_RS23215 bba90253e9558ce2bd2c967a40591736 105 Gene3D G3DSA:2.60.120.10 25 105 2.4E-10 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS23215 bba90253e9558ce2bd2c967a40591736 105 SUPERFAMILY SSF51182 18 105 9.41E-14 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS07310 cd79ea9ccbba3db1222192363f10b200 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 250 1.0E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS07310 cd79ea9ccbba3db1222192363f10b200 265 PANTHER PTHR30193 1 265 7.8E-40 T 22-04-2016 RPIC12D_RS07310 cd79ea9ccbba3db1222192363f10b200 265 Gene3D G3DSA:1.10.3720.10 11 254 1.0E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS07310 cd79ea9ccbba3db1222192363f10b200 265 PANTHER PTHR30193:SF20 1 265 7.8E-40 T 22-04-2016 RPIC12D_RS07310 cd79ea9ccbba3db1222192363f10b200 265 SUPERFAMILY SSF161098 2 253 7.85E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS12745 24db212a984514b35309926430e7ef39 715 SUPERFAMILY SSF52540 475 677 1.36E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12745 24db212a984514b35309926430e7ef39 715 SUPERFAMILY SSF52540 206 476 1.28E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12745 24db212a984514b35309926430e7ef39 715 Pfam PF00270 DEAD/DEAH box helicase 307 457 3.2E-16 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIC12D_RS12745 24db212a984514b35309926430e7ef39 715 PANTHER PTHR24031:SF249 275 299 1.1E-122 T 22-04-2016 RPIC12D_RS12745 24db212a984514b35309926430e7ef39 715 PANTHER PTHR24031:SF249 316 625 1.1E-122 T 22-04-2016 RPIC12D_RS12745 24db212a984514b35309926430e7ef39 715 PANTHER PTHR24031:SF249 648 700 1.1E-122 T 22-04-2016 RPIC12D_RS12745 24db212a984514b35309926430e7ef39 715 Pfam PF00271 Helicase conserved C-terminal domain 495 610 2.1E-18 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS12745 24db212a984514b35309926430e7ef39 715 SMART SM00487 282 482 2.3E-28 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC12D_RS12745 24db212a984514b35309926430e7ef39 715 Gene3D G3DSA:2.40.50.140 72 154 9.9E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS12745 24db212a984514b35309926430e7ef39 715 SUPERFAMILY SSF50249 31 186 1.88E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS12745 24db212a984514b35309926430e7ef39 715 Gene3D G3DSA:3.40.50.300 477 659 1.3E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12745 24db212a984514b35309926430e7ef39 715 Gene3D G3DSA:3.40.50.300 273 476 2.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12745 24db212a984514b35309926430e7ef39 715 SMART SM00490 528 611 2.5E-18 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS12745 24db212a984514b35309926430e7ef39 715 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 41 685 5.5E-209 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 RPIC12D_RS12745 24db212a984514b35309926430e7ef39 715 PANTHER PTHR24031 275 299 1.1E-122 T 22-04-2016 RPIC12D_RS12745 24db212a984514b35309926430e7ef39 715 PANTHER PTHR24031 316 625 1.1E-122 T 22-04-2016 RPIC12D_RS12745 24db212a984514b35309926430e7ef39 715 PANTHER PTHR24031 648 700 1.1E-122 T 22-04-2016 RPIC12D_RS12745 24db212a984514b35309926430e7ef39 715 Pfam PF17191 RecG wedge domain 32 182 3.2E-9 T 22-04-2016 IPR033454 RecG, wedge domain RPIC12D_RS06075 04cddfce8e259f41daebc2462e775d61 162 SUPERFAMILY SSF74942 75 150 3.79E-12 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal RPIC12D_RS06075 04cddfce8e259f41daebc2462e775d61 162 SUPERFAMILY SSF75420 3 74 6.67E-15 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal RPIC12D_RS06075 04cddfce8e259f41daebc2462e775d61 162 Gene3D G3DSA:2.30.30.180 79 147 1.2E-9 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal RPIC12D_RS06075 04cddfce8e259f41daebc2462e775d61 162 Gene3D G3DSA:3.30.300.70 3 71 1.5E-15 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal RPIC12D_RS06075 04cddfce8e259f41daebc2462e775d61 162 PANTHER PTHR33867:SF1 3 147 3.8E-30 T 22-04-2016 RPIC12D_RS06075 04cddfce8e259f41daebc2462e775d61 162 Pfam PF02576 Putative ribosome maturation factor RimP 6 146 3.0E-37 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 RPIC12D_RS06075 04cddfce8e259f41daebc2462e775d61 162 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 150 21.034 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 RPIC12D_RS06075 04cddfce8e259f41daebc2462e775d61 162 PANTHER PTHR33867 3 147 3.8E-30 T 22-04-2016 RPIC12D_RS01290 9dbf8fb1dfed7ed5a77fd38ade634700 233 SUPERFAMILY SSF56529 22 232 1.83E-70 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC12D_RS01290 9dbf8fb1dfed7ed5a77fd38ade634700 233 PANTHER PTHR11820:SF7 25 232 1.2E-88 T 22-04-2016 RPIC12D_RS01290 9dbf8fb1dfed7ed5a77fd38ade634700 233 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 28 232 9.3E-53 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC12D_RS01290 9dbf8fb1dfed7ed5a77fd38ade634700 233 Gene3D G3DSA:3.90.850.10 23 232 4.1E-80 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC12D_RS01290 9dbf8fb1dfed7ed5a77fd38ade634700 233 PANTHER PTHR11820 25 232 1.2E-88 T 22-04-2016 RPIC12D_RS10380 36fa0f4c17026f1fd06cb28b70f4c386 132 Pfam PF02627 Carboxymuconolactone decarboxylase family 37 118 9.1E-26 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS10380 36fa0f4c17026f1fd06cb28b70f4c386 132 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 4 124 1.0E-59 T 22-04-2016 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44|UniPathway: UPA00157 RPIC12D_RS10380 36fa0f4c17026f1fd06cb28b70f4c386 132 PANTHER PTHR33570 1 129 1.3E-62 T 22-04-2016 RPIC12D_RS10380 36fa0f4c17026f1fd06cb28b70f4c386 132 SUPERFAMILY SSF69118 5 123 2.88E-37 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS10380 36fa0f4c17026f1fd06cb28b70f4c386 132 Gene3D G3DSA:1.20.1290.10 5 127 6.8E-27 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS10380 36fa0f4c17026f1fd06cb28b70f4c386 132 PANTHER PTHR33570:SF2 1 129 1.3E-62 T 22-04-2016 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 SUPERFAMILY SSF53671 16 321 2.23E-96 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 PANTHER PTHR11405:SF16 9 322 1.8E-124 T 22-04-2016 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 17 318 7.8E-94 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 171 315 5.9E-24 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 Gene3D G3DSA:3.40.50.1370 17 162 1.1E-50 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 16 321 41.045 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 235 244 2.4E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 150 167 2.4E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 300 314 2.4E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 55 77 2.4E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 276 281 2.4E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 93 102 2.4E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 Gene3D G3DSA:3.40.50.1370 163 297 5.2E-50 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 151 162 2.2E-17 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 284 307 2.2E-17 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 272 281 2.2E-17 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 65 84 2.2E-17 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 65 72 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 17 163 1.2E-37 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RPIC12D_RS02840 185d4fe1de30dacec1ef1df6a11aecf6 323 PANTHER PTHR11405 9 322 1.8E-124 T 22-04-2016 RPIC12D_RS15185 a7efeac1b3afb2f2fc6130005dd16b50 376 SUPERFAMILY SSF56935 21 241 4.97E-79 T 22-04-2016 RPIC12D_RS15185 a7efeac1b3afb2f2fc6130005dd16b50 376 SUPERFAMILY SSF56935 272 376 4.97E-79 T 22-04-2016 RPIC12D_RS15185 a7efeac1b3afb2f2fc6130005dd16b50 376 Pfam PF13609 Gram-negative porin 8 345 1.5E-50 T 22-04-2016 RPIC12D_RS15185 a7efeac1b3afb2f2fc6130005dd16b50 376 Gene3D G3DSA:2.40.160.10 21 376 1.5E-90 T 22-04-2016 IPR023614 Porin domain RPIC12D_RS07545 7a6cab1886923c6ae5d3301b40c23fdf 264 SMART SM00382 31 226 1.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS07545 7a6cab1886923c6ae5d3301b40c23fdf 264 Gene3D G3DSA:3.40.50.300 1 231 2.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07545 7a6cab1886923c6ae5d3301b40c23fdf 264 PANTHER PTHR24220:SF534 3 250 3.9E-118 T 22-04-2016 RPIC12D_RS07545 7a6cab1886923c6ae5d3301b40c23fdf 264 PANTHER PTHR24220 3 250 3.9E-118 T 22-04-2016 RPIC12D_RS07545 7a6cab1886923c6ae5d3301b40c23fdf 264 Pfam PF00005 ABC transporter 22 177 2.0E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS07545 7a6cab1886923c6ae5d3301b40c23fdf 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS07545 7a6cab1886923c6ae5d3301b40c23fdf 264 SUPERFAMILY SSF52540 1 232 6.55E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10065 fc97bf64d8bdfa465ee3a237684ac881 451 PANTHER PTHR24064 17 419 3.6E-79 T 22-04-2016 RPIC12D_RS10065 fc97bf64d8bdfa465ee3a237684ac881 451 SUPERFAMILY SSF103473 13 445 1.07E-73 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS10065 fc97bf64d8bdfa465ee3a237684ac881 451 Pfam PF07690 Major Facilitator Superfamily 40 349 2.3E-34 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS10065 fc97bf64d8bdfa465ee3a237684ac881 451 PANTHER PTHR24064:SF234 17 419 3.6E-79 T 22-04-2016 RPIC12D_RS10065 fc97bf64d8bdfa465ee3a237684ac881 451 Gene3D G3DSA:1.20.1250.20 33 222 2.5E-32 T 22-04-2016 RPIC12D_RS10065 fc97bf64d8bdfa465ee3a237684ac881 451 Gene3D G3DSA:1.20.1250.20 269 446 3.0E-16 T 22-04-2016 RPIC12D_RS10065 fc97bf64d8bdfa465ee3a237684ac881 451 ProSitePatterns PS00216 Sugar transport proteins signature 1. 89 105 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS02140 0d6576a3c876b446e182d646946863ed 579 Gene3D G3DSA:3.30.300.30 468 565 2.0E-26 T 22-04-2016 RPIC12D_RS02140 0d6576a3c876b446e182d646946863ed 579 SUPERFAMILY SSF56801 25 568 1.27E-147 T 22-04-2016 RPIC12D_RS02140 0d6576a3c876b446e182d646946863ed 579 Gene3D G3DSA:2.30.38.10 392 463 1.3E-27 T 22-04-2016 RPIC12D_RS02140 0d6576a3c876b446e182d646946863ed 579 Gene3D G3DSA:3.40.50.980 229 391 2.7E-41 T 22-04-2016 RPIC12D_RS02140 0d6576a3c876b446e182d646946863ed 579 PANTHER PTHR24096 188 566 7.7E-162 T 22-04-2016 RPIC12D_RS02140 0d6576a3c876b446e182d646946863ed 579 PANTHER PTHR24096 29 162 7.7E-162 T 22-04-2016 RPIC12D_RS02140 0d6576a3c876b446e182d646946863ed 579 Pfam PF13193 AMP-binding enzyme C-terminal domain 482 557 1.1E-16 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC12D_RS02140 0d6576a3c876b446e182d646946863ed 579 ProSitePatterns PS00455 Putative AMP-binding domain signature. 223 234 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC12D_RS02140 0d6576a3c876b446e182d646946863ed 579 Gene3D G3DSA:3.40.50.980 197 228 2.1E-42 T 22-04-2016 RPIC12D_RS02140 0d6576a3c876b446e182d646946863ed 579 Gene3D G3DSA:3.40.50.980 34 161 2.1E-42 T 22-04-2016 RPIC12D_RS02140 0d6576a3c876b446e182d646946863ed 579 Pfam PF00501 AMP-binding enzyme 39 473 3.1E-107 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC12D_RS03515 789a1701ea5ebbbd9a5d06fe2689dd8f 155 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 16 147 20.85 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 RPIC12D_RS03515 789a1701ea5ebbbd9a5d06fe2689dd8f 155 PANTHER PTHR11078 16 150 8.9E-34 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 RPIC12D_RS03515 789a1701ea5ebbbd9a5d06fe2689dd8f 155 SUPERFAMILY SSF48013 16 147 3.66E-39 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RPIC12D_RS03515 789a1701ea5ebbbd9a5d06fe2689dd8f 155 Pfam PF01029 NusB family 19 143 2.9E-31 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RPIC12D_RS03515 789a1701ea5ebbbd9a5d06fe2689dd8f 155 Gene3D G3DSA:1.10.940.10 14 148 2.6E-37 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RPIC12D_RS03515 789a1701ea5ebbbd9a5d06fe2689dd8f 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 18 145 6.8E-37 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 RPIC12D_RS16255 79aa518a20085d94357b4483efd94b43 285 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 276 2.7E-73 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 RPIC12D_RS16255 79aa518a20085d94357b4483efd94b43 285 SUPERFAMILY SSF53335 9 281 1.91E-96 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS16255 79aa518a20085d94357b4483efd94b43 285 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 272 40.935 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 RPIC12D_RS16255 79aa518a20085d94357b4483efd94b43 285 Gene3D G3DSA:3.40.50.150 1 281 1.8E-119 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS16255 79aa518a20085d94357b4483efd94b43 285 PANTHER PTHR37426:SF1 2 283 1.0E-110 T 22-04-2016 RPIC12D_RS16255 79aa518a20085d94357b4483efd94b43 285 PANTHER PTHR37426 2 283 1.0E-110 T 22-04-2016 RPIC12D_RS10940 0c76781497bc8fdb6b2a89598ee8c5f5 291 Pfam PF02634 FdhD/NarQ family 34 267 7.2E-80 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 RPIC12D_RS10940 0c76781497bc8fdb6b2a89598ee8c5f5 291 PANTHER PTHR30592:SF2 4 279 2.3E-120 T 22-04-2016 RPIC12D_RS10940 0c76781497bc8fdb6b2a89598ee8c5f5 291 Gene3D G3DSA:3.40.140.10 131 273 5.0E-54 T 22-04-2016 RPIC12D_RS10940 0c76781497bc8fdb6b2a89598ee8c5f5 291 SUPERFAMILY SSF53927 17 267 9.93E-72 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RPIC12D_RS10940 0c76781497bc8fdb6b2a89598ee8c5f5 291 PIRSF PIRSF015626 5 272 2.7E-80 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 RPIC12D_RS10940 0c76781497bc8fdb6b2a89598ee8c5f5 291 PANTHER PTHR30592 4 279 2.3E-120 T 22-04-2016 RPIC12D_RS10940 0c76781497bc8fdb6b2a89598ee8c5f5 291 Gene3D G3DSA:3.10.20.10 35 117 1.3E-17 T 22-04-2016 RPIC12D_RS08390 b8452e2d5180fb4017e3e3faefb581e5 470 Pfam PF02913 FAD linked oxidases, C-terminal domain 219 469 2.7E-47 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RPIC12D_RS08390 b8452e2d5180fb4017e3e3faefb581e5 470 SUPERFAMILY SSF55103 194 469 7.36E-56 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RPIC12D_RS08390 b8452e2d5180fb4017e3e3faefb581e5 470 Gene3D G3DSA:1.10.45.10 430 469 1.6E-15 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RPIC12D_RS08390 b8452e2d5180fb4017e3e3faefb581e5 470 PANTHER PTHR11748:SF76 1 470 1.1E-190 T 22-04-2016 RPIC12D_RS08390 b8452e2d5180fb4017e3e3faefb581e5 470 Gene3D G3DSA:3.30.43.10 2 97 4.0E-27 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RPIC12D_RS08390 b8452e2d5180fb4017e3e3faefb581e5 470 Gene3D G3DSA:3.30.465.10 98 219 2.0E-34 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC12D_RS08390 b8452e2d5180fb4017e3e3faefb581e5 470 PANTHER PTHR11748 1 470 1.1E-190 T 22-04-2016 RPIC12D_RS08390 b8452e2d5180fb4017e3e3faefb581e5 470 SUPERFAMILY SSF56176 4 219 3.0E-76 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS08390 b8452e2d5180fb4017e3e3faefb581e5 470 Pfam PF01565 FAD binding domain 42 179 2.0E-36 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIC12D_RS04750 f9139aa9ee3de24b53b935904a6d8c56 106 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 2 106 1.9E-38 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 RPIC12D_RS04750 f9139aa9ee3de24b53b935904a6d8c56 106 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 87 104 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site RPIC12D_RS04750 f9139aa9ee3de24b53b935904a6d8c56 106 PANTHER PTHR10072:SF48 1 106 4.1E-51 T 22-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 RPIC12D_RS04750 f9139aa9ee3de24b53b935904a6d8c56 106 SUPERFAMILY SSF89360 1 95 4.71E-33 T 22-04-2016 IPR000361 FeS cluster biogenesis RPIC12D_RS04750 f9139aa9ee3de24b53b935904a6d8c56 106 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 102 7.3E-24 T 22-04-2016 IPR000361 FeS cluster biogenesis RPIC12D_RS04750 f9139aa9ee3de24b53b935904a6d8c56 106 Gene3D G3DSA:2.60.300.12 1 95 4.6E-36 T 22-04-2016 IPR000361 FeS cluster biogenesis RPIC12D_RS04750 f9139aa9ee3de24b53b935904a6d8c56 106 PANTHER PTHR10072 1 106 4.1E-51 T 22-04-2016 RPIC12D_RS04750 f9139aa9ee3de24b53b935904a6d8c56 106 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 2 106 1.5E-52 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 RPIC12D_RS05825 a110ab17bcea665b4f953a8ecdafda81 458 SUPERFAMILY SSF117892 179 306 1.18E-19 T 22-04-2016 IPR001107 Band 7 domain RPIC12D_RS05825 a110ab17bcea665b4f953a8ecdafda81 458 Pfam PF01145 SPFH domain / Band 7 family 126 315 1.5E-26 T 22-04-2016 IPR001107 Band 7 domain RPIC12D_RS05825 a110ab17bcea665b4f953a8ecdafda81 458 Pfam PF12221 Bacterial membrane protein N terminal 29 83 3.1E-12 T 22-04-2016 IPR020980 Menbrane protein HflK, N-terminal RPIC12D_RS05825 a110ab17bcea665b4f953a8ecdafda81 458 TIGRFAM TIGR01933 hflK: HflK protein 124 400 3.3E-88 T 22-04-2016 IPR010201 HflK GO:0016021 RPIC12D_RS05825 a110ab17bcea665b4f953a8ecdafda81 458 SMART SM00244 122 299 4.3E-24 T 22-04-2016 IPR001107 Band 7 domain RPIC12D_RS05825 a110ab17bcea665b4f953a8ecdafda81 458 PANTHER PTHR10264 37 435 2.9E-110 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC12D_RS05825 a110ab17bcea665b4f953a8ecdafda81 458 PANTHER PTHR10264:SF51 37 435 2.9E-110 T 22-04-2016 IPR010201 HflK GO:0016021 RPIC12D_RS05715 83bbd8068241e3aabfd01376538afd30 263 PANTHER PTHR30151 37 263 3.8E-96 T 22-04-2016 RPIC12D_RS05715 83bbd8068241e3aabfd01376538afd30 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 250 7.4E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS05715 83bbd8068241e3aabfd01376538afd30 263 Gene3D G3DSA:1.10.3720.10 56 252 1.5E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS05715 83bbd8068241e3aabfd01376538afd30 263 PANTHER PTHR30151:SF18 37 263 3.8E-96 T 22-04-2016 RPIC12D_RS05715 83bbd8068241e3aabfd01376538afd30 263 SUPERFAMILY SSF161098 57 243 3.4E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS11115 c1f3105c8c42782a3e24e2c6875f40d7 105 Pfam PF05164 Cell division protein ZapA 6 93 8.2E-20 T 22-04-2016 IPR007838 Cell division protein ZapA-like RPIC12D_RS11115 c1f3105c8c42782a3e24e2c6875f40d7 105 SUPERFAMILY SSF102829 5 98 1.7E-19 T 22-04-2016 IPR007838 Cell division protein ZapA-like RPIC12D_RS11115 c1f3105c8c42782a3e24e2c6875f40d7 105 PANTHER PTHR34981:SF1 2 105 2.0E-13 T 22-04-2016 RPIC12D_RS11115 c1f3105c8c42782a3e24e2c6875f40d7 105 PANTHER PTHR34981 2 105 2.0E-13 T 22-04-2016 RPIC12D_RS05815 e2e71f71025e0aa9ba8df37df32c3ac2 79 PANTHER PTHR34772:SF1 2 78 8.2E-35 T 22-04-2016 RPIC12D_RS05815 e2e71f71025e0aa9ba8df37df32c3ac2 79 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 8 65 1.1E-28 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 RPIC12D_RS05815 e2e71f71025e0aa9ba8df37df32c3ac2 79 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 27.79 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 RPIC12D_RS05815 e2e71f71025e0aa9ba8df37df32c3ac2 79 Gene3D G3DSA:2.30.30.100 2 70 9.7E-37 T 22-04-2016 RPIC12D_RS05815 e2e71f71025e0aa9ba8df37df32c3ac2 79 SUPERFAMILY SSF50182 8 70 1.34E-23 T 22-04-2016 IPR010920 LSM domain RPIC12D_RS05815 e2e71f71025e0aa9ba8df37df32c3ac2 79 PANTHER PTHR34772 2 78 8.2E-35 T 22-04-2016 RPIC12D_RS12290 3893b9f0ae98dc68cb0ad9e4c1900c2e 233 Gene3D G3DSA:3.40.50.300 3 161 8.7E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12290 3893b9f0ae98dc68cb0ad9e4c1900c2e 233 Gene3D G3DSA:1.10.8.60 165 229 1.1E-26 T 22-04-2016 RPIC12D_RS12290 3893b9f0ae98dc68cb0ad9e4c1900c2e 233 PANTHER PTHR30050 4 229 3.8E-42 T 22-04-2016 RPIC12D_RS12290 3893b9f0ae98dc68cb0ad9e4c1900c2e 233 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 6 230 8.4E-75 T 22-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 RPIC12D_RS12290 3893b9f0ae98dc68cb0ad9e4c1900c2e 233 SUPERFAMILY SSF52540 16 210 3.47E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12290 3893b9f0ae98dc68cb0ad9e4c1900c2e 233 PANTHER PTHR30050:SF5 4 229 3.8E-42 T 22-04-2016 RPIC12D_RS07415 35a059e0c2708631d2b33983f444c82a 300 PANTHER PTHR24322 161 195 1.3E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07415 35a059e0c2708631d2b33983f444c82a 300 PANTHER PTHR24322 11 145 1.3E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07415 35a059e0c2708631d2b33983f444c82a 300 Pfam PF00106 short chain dehydrogenase 8 206 3.7E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07415 35a059e0c2708631d2b33983f444c82a 300 SUPERFAMILY SSF51735 1 254 3.31E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS07415 35a059e0c2708631d2b33983f444c82a 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.3E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07415 35a059e0c2708631d2b33983f444c82a 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.3E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07415 35a059e0c2708631d2b33983f444c82a 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.3E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07415 35a059e0c2708631d2b33983f444c82a 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.3E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07415 35a059e0c2708631d2b33983f444c82a 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 2.3E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07415 35a059e0c2708631d2b33983f444c82a 300 Gene3D G3DSA:3.40.50.720 6 256 4.2E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS07415 35a059e0c2708631d2b33983f444c82a 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.1E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07415 35a059e0c2708631d2b33983f444c82a 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 6.1E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07415 35a059e0c2708631d2b33983f444c82a 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 6.1E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 SMART SM01192 139 425 9.9E-225 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 SMART SM01193 4 134 2.6E-96 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 Hamap MF_00318 Enolase [eno]. 2 411 45.157 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 Pfam PF03952 Enolase, N-terminal domain 4 133 1.0E-59 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 PANTHER PTHR11902 1 427 1.9E-262 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 PRINTS PR00148 Enolase signature 161 174 5.544013E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 PRINTS PR00148 Enolase signature 334 348 5.544013E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 PRINTS PR00148 Enolase signature 311 322 5.544013E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 PRINTS PR00148 Enolase signature 37 51 5.544013E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 PRINTS PR00148 Enolase signature 107 123 5.544013E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 PRINTS PR00148 Enolase signature 363 380 5.544013E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 Gene3D G3DSA:3.20.20.120 128 424 3.4E-136 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 PIRSF PIRSF001400 1 425 2.4E-192 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 SUPERFAMILY SSF54826 4 136 1.68E-56 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 Gene3D G3DSA:3.30.390.10 4 126 1.0E-55 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 SUPERFAMILY SSF51604 139 426 2.55E-130 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 425 3.7E-211 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 424 5.5E-134 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RPIC12D_RS05355 5ff09556539f60d2390aa28dab8bbbc4 427 ProSitePatterns PS00164 Enolase signature. 334 347 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS09510 ea18b5d60c161284de7526ce6e3c23bf 200 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 148 1.0E-27 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 RPIC12D_RS09510 ea18b5d60c161284de7526ce6e3c23bf 200 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 168 35.216 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 RPIC12D_RS09510 ea18b5d60c161284de7526ce6e3c23bf 200 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 33 159 1.3E-41 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 RPIC12D_RS09510 ea18b5d60c161284de7526ce6e3c23bf 200 PANTHER PTHR10884 25 178 7.3E-68 T 22-04-2016 RPIC12D_RS09510 ea18b5d60c161284de7526ce6e3c23bf 200 SUPERFAMILY SSF143243 8 181 4.58E-58 T 22-04-2016 RPIC12D_RS09510 ea18b5d60c161284de7526ce6e3c23bf 200 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 121 142 - T 22-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 RPIC12D_RS09510 ea18b5d60c161284de7526ce6e3c23bf 200 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 161 2.2E-44 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 RPIC12D_RS06640 d88dec1c85506064de639980bbef9ef2 341 PANTHER PTHR36512 1 339 1.5E-62 T 22-04-2016 RPIC12D_RS06640 d88dec1c85506064de639980bbef9ef2 341 PANTHER PTHR36512:SF1 1 339 1.5E-62 T 22-04-2016 RPIC12D_RS06640 d88dec1c85506064de639980bbef9ef2 341 Gene3D G3DSA:3.60.70.12 8 338 2.3E-123 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RPIC12D_RS06640 d88dec1c85506064de639980bbef9ef2 341 Pfam PF03576 Peptidase family S58 17 333 3.4E-108 T 22-04-2016 IPR005321 Peptidase S58, DmpA RPIC12D_RS06640 d88dec1c85506064de639980bbef9ef2 341 SUPERFAMILY SSF56266 9 334 6.02E-99 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RPIC12D_RS09360 2c030cf362b68fd9576b752d723c050f 214 SUPERFAMILY SSF69287 1 77 8.76E-17 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal RPIC12D_RS09360 2c030cf362b68fd9576b752d723c050f 214 Gene3D G3DSA:3.30.70.790 78 149 1.2E-31 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 RPIC12D_RS09360 2c030cf362b68fd9576b752d723c050f 214 Gene3D G3DSA:2.60.260.20 23 77 1.6E-18 T 22-04-2016 RPIC12D_RS09360 2c030cf362b68fd9576b752d723c050f 214 Pfam PF05194 UreE urease accessory protein, C-terminal domain 78 182 1.8E-11 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 RPIC12D_RS09360 2c030cf362b68fd9576b752d723c050f 214 SUPERFAMILY SSF69737 77 144 2.09E-21 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 RPIC12D_RS09360 2c030cf362b68fd9576b752d723c050f 214 SMART SM00988 7 71 1.1E-19 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal RPIC12D_RS09360 2c030cf362b68fd9576b752d723c050f 214 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 145 24.785 T 22-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 RPIC12D_RS09360 2c030cf362b68fd9576b752d723c050f 214 Pfam PF02814 UreE urease accessory protein, N-terminal domain 18 71 4.7E-19 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 SUPERFAMILY SSF81886 910 922 1.7E-77 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 SUPERFAMILY SSF81886 632 850 1.7E-77 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 PRINTS PR00906 SecA protein signature 379 396 3.6E-69 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 PRINTS PR00906 SecA protein signature 416 429 3.6E-69 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 PRINTS PR00906 SecA protein signature 117 127 3.6E-69 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 PRINTS PR00906 SecA protein signature 63 87 3.6E-69 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 PRINTS PR00906 SecA protein signature 170 190 3.6E-69 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 PRINTS PR00906 SecA protein signature 342 364 3.6E-69 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 PRINTS PR00906 SecA protein signature 101 115 3.6E-69 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 SUPERFAMILY SSF52540 421 628 2.3E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 828 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 PANTHER PTHR30612 560 934 0.0 T 22-04-2016 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 PANTHER PTHR30612 5 523 0.0 T 22-04-2016 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 SUPERFAMILY SSF52540 5 228 1.19E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 SMART SM00957 6 405 0.0 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 Pfam PF07516 SecA Wing and Scaffold domain 627 839 4.0E-63 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 842 19.963 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 Gene3D G3DSA:1.10.3060.10 658 841 1.3E-54 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 ProSitePatterns PS01312 SecA family signature. 503 518 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 SUPERFAMILY SSF52540 371 418 1.19E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 Gene3D G3DSA:3.40.50.300 3 228 2.6E-129 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 Gene3D G3DSA:3.40.50.300 372 419 2.6E-129 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 Pfam PF07517 SecA DEAD-like domain 6 405 3.8E-134 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 SUPERFAMILY SSF81767 227 371 7.06E-44 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 Gene3D G3DSA:3.90.1440.10 230 371 7.3E-45 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 Gene3D G3DSA:3.40.50.300 422 629 2.5E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 SMART SM00958 228 361 5.2E-80 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 Pfam PF02810 SEC-C motif 914 932 1.7E-10 T 22-04-2016 IPR004027 SEC-C motif RPIC12D_RS13575 f26b8fc19cdad12e06121c371a62d9b6 934 Pfam PF01043 SecA preprotein cross-linking domain 232 361 9.8E-38 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RPIC12D_RS05790 87b145e394932c311b0aa8b7b443d118 428 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 23 412 1.1E-116 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RPIC12D_RS05790 87b145e394932c311b0aa8b7b443d118 428 Pfam PF04551 GcpE protein 34 413 6.1E-113 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RPIC12D_RS05790 87b145e394932c311b0aa8b7b443d118 428 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 21 417 27.983 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RPIC12D_RS05790 87b145e394932c311b0aa8b7b443d118 428 PIRSF PIRSF004640 15 423 7.6E-129 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RPIC12D_RS05790 87b145e394932c311b0aa8b7b443d118 428 PANTHER PTHR30454 1 417 9.4E-138 T 22-04-2016 RPIC12D_RS02310 d9643fa3bcf9616c440ecca7c03b0fe4 167 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 36 4.0E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS02310 d9643fa3bcf9616c440ecca7c03b0fe4 167 Pfam PF13633 Prokaryotic N-terminal methylation site 14 39 7.6E-11 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS02310 d9643fa3bcf9616c440ecca7c03b0fe4 167 SUPERFAMILY SSF54523 16 124 9.94E-21 T 22-04-2016 RPIC12D_RS02310 d9643fa3bcf9616c440ecca7c03b0fe4 167 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 14 34 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS02310 d9643fa3bcf9616c440ecca7c03b0fe4 167 Gene3D G3DSA:3.30.700.10 16 166 2.2E-30 T 22-04-2016 RPIC12D_RS02310 d9643fa3bcf9616c440ecca7c03b0fe4 167 PANTHER PTHR30093 11 75 4.4E-16 T 22-04-2016 RPIC12D_RS02310 d9643fa3bcf9616c440ecca7c03b0fe4 167 Pfam PF00114 Pilin (bacterial filament) 44 166 2.7E-12 T 22-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 SUPERFAMILY SSF52518 317 502 1.81E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 Pfam PF02780 Transketolase, C-terminal domain 506 616 1.7E-24 T 22-04-2016 IPR033248 Transketolase, C-terminal domain RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 PANTHER PTHR11624 237 636 0.0 T 22-04-2016 IPR033247 Transketolase family RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 PANTHER PTHR11624 19 214 0.0 T 22-04-2016 IPR033247 Transketolase family RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 5 625 46.676 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 Pfam PF02779 Transketolase, pyrimidine binding domain 318 479 2.7E-41 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 SUPERFAMILY SSF52518 239 381 6.35E-86 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 SUPERFAMILY SSF52518 3 195 6.35E-86 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 SMART SM00861 319 483 2.7E-72 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 Gene3D G3DSA:3.40.50.920 496 623 3.2E-35 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 Gene3D G3DSA:3.40.50.970 294 495 6.1E-77 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 ProSitePatterns PS00801 Transketolase signature 1. 31 50 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 6 282 9.3E-119 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 SUPERFAMILY SSF52922 491 623 9.42E-32 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 7 622 2.7E-262 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 PANTHER PTHR11624:SF20 237 636 0.0 T 22-04-2016 RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 PANTHER PTHR11624:SF20 19 214 0.0 T 22-04-2016 RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 Gene3D G3DSA:3.40.50.970 238 293 4.6E-44 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS10240 935a883769a128ec8ba73f228ca8fcc6 636 Gene3D G3DSA:3.40.50.970 15 197 4.6E-44 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS17180 02b2886cd0f3893f04314b1e7b8e6b65 363 SUPERFAMILY SSF55869 46 107 3.66E-22 T 22-04-2016 RPIC12D_RS17180 02b2886cd0f3893f04314b1e7b8e6b65 363 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 106 310 9.9E-35 T 22-04-2016 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003918|GO:0006265 RPIC12D_RS17180 02b2886cd0f3893f04314b1e7b8e6b65 363 Gene3D G3DSA:3.90.15.10 111 242 1.3E-42 T 22-04-2016 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS17180 02b2886cd0f3893f04314b1e7b8e6b65 363 SUPERFAMILY SSF56349 102 324 1.04E-72 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC12D_RS17180 02b2886cd0f3893f04314b1e7b8e6b65 363 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 190 206 2.5E-9 T 22-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS17180 02b2886cd0f3893f04314b1e7b8e6b65 363 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 169 183 2.5E-9 T 22-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS17180 02b2886cd0f3893f04314b1e7b8e6b65 363 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 146 165 2.5E-9 T 22-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS17180 02b2886cd0f3893f04314b1e7b8e6b65 363 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 255 269 2.5E-9 T 22-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS17180 02b2886cd0f3893f04314b1e7b8e6b65 363 Gene3D G3DSA:1.20.120.380 256 331 7.5E-25 T 22-04-2016 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 RPIC12D_RS13280 cedb48d9d7e3c987ad34dc1fd5c731ba 235 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.468 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH RPIC12D_RS13280 cedb48d9d7e3c987ad34dc1fd5c731ba 235 PANTHER PTHR23114 1 155 4.7E-36 T 22-04-2016 RPIC12D_RS13280 cedb48d9d7e3c987ad34dc1fd5c731ba 235 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RPIC12D_RS13280 cedb48d9d7e3c987ad34dc1fd5c731ba 235 Pfam PF00293 NUDIX domain 7 137 2.6E-22 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC12D_RS13280 cedb48d9d7e3c987ad34dc1fd5c731ba 235 SUPERFAMILY SSF55811 6 160 1.02E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS13280 cedb48d9d7e3c987ad34dc1fd5c731ba 235 Gene3D G3DSA:3.90.79.10 7 152 1.0E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS13280 cedb48d9d7e3c987ad34dc1fd5c731ba 235 PRINTS PR00502 NUDIX hydrolase family signature 33 47 6.0E-7 T 22-04-2016 IPR020476 NUDIX hydrolase RPIC12D_RS13280 cedb48d9d7e3c987ad34dc1fd5c731ba 235 PRINTS PR00502 NUDIX hydrolase family signature 47 62 6.0E-7 T 22-04-2016 IPR020476 NUDIX hydrolase RPIC12D_RS00360 c753a551d57813f813052fb782269494 304 Pfam PF03466 LysR substrate binding domain 88 297 5.9E-40 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS00360 c753a551d57813f813052fb782269494 304 SUPERFAMILY SSF53850 91 301 2.53E-40 T 22-04-2016 RPIC12D_RS00360 c753a551d57813f813052fb782269494 304 SUPERFAMILY SSF46785 2 112 9.64E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00360 c753a551d57813f813052fb782269494 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.3E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS00360 c753a551d57813f813052fb782269494 304 Gene3D G3DSA:3.40.190.10 179 263 4.2E-4 T 22-04-2016 RPIC12D_RS00360 c753a551d57813f813052fb782269494 304 Gene3D G3DSA:3.40.190.10 93 178 2.3E-23 T 22-04-2016 RPIC12D_RS00360 c753a551d57813f813052fb782269494 304 Gene3D G3DSA:1.10.10.10 1 82 5.7E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00360 c753a551d57813f813052fb782269494 304 PANTHER PTHR30537:SF21 1 297 2.1E-133 T 22-04-2016 RPIC12D_RS00360 c753a551d57813f813052fb782269494 304 PANTHER PTHR30537 1 297 2.1E-133 T 22-04-2016 RPIC12D_RS02255 999ae55377443de93a77fb48442c345d 608 Gene3D G3DSA:2.60.120.10 12 130 1.0E-10 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS02255 999ae55377443de93a77fb48442c345d 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 292 423 1.5E-38 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 RPIC12D_RS02255 999ae55377443de93a77fb48442c345d 608 SUPERFAMILY SSF51206 10 131 6.15E-15 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like RPIC12D_RS02255 999ae55377443de93a77fb48442c345d 608 Pfam PF00027 Cyclic nucleotide-binding domain 31 110 3.9E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC12D_RS02255 999ae55377443de93a77fb48442c345d 608 Gene3D G3DSA:3.10.580.10 145 268 4.4E-19 T 22-04-2016 RPIC12D_RS02255 999ae55377443de93a77fb48442c345d 608 SMART SM00116 220 267 2.1E-5 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS02255 999ae55377443de93a77fb48442c345d 608 Pfam PF00571 CBS domain 218 267 1.4E-6 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS02255 999ae55377443de93a77fb48442c345d 608 SUPERFAMILY SSF54631 144 268 5.81E-19 T 22-04-2016 RPIC12D_RS02255 999ae55377443de93a77fb48442c345d 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 462 602 2.8E-38 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding RPIC12D_RS02255 999ae55377443de93a77fb48442c345d 608 SMART SM00100 11 126 0.0064 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC12D_RS06160 500665e83cad0a54cc4368980c5a03b8 387 SUPERFAMILY SSF54427 267 381 3.39E-18 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS06160 500665e83cad0a54cc4368980c5a03b8 387 PANTHER PTHR10992 3 257 4.4E-55 T 22-04-2016 RPIC12D_RS06160 500665e83cad0a54cc4368980c5a03b8 387 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 102 9.5E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS06160 500665e83cad0a54cc4368980c5a03b8 387 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 9.5E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS06160 500665e83cad0a54cc4368980c5a03b8 387 PRINTS PR00111 Alpha/beta hydrolase fold signature 200 214 9.5E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS06160 500665e83cad0a54cc4368980c5a03b8 387 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 9.5E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS06160 500665e83cad0a54cc4368980c5a03b8 387 Gene3D G3DSA:3.10.450.50 268 377 1.2E-16 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS06160 500665e83cad0a54cc4368980c5a03b8 387 Gene3D G3DSA:3.40.50.1820 3 256 1.4E-59 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS06160 500665e83cad0a54cc4368980c5a03b8 387 Pfam PF12697 Alpha/beta hydrolase family 22 249 2.4E-22 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS06160 500665e83cad0a54cc4368980c5a03b8 387 PRINTS PR00412 Epoxide hydrolase signature 232 254 9.4E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC12D_RS06160 500665e83cad0a54cc4368980c5a03b8 387 PRINTS PR00412 Epoxide hydrolase signature 45 60 9.4E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC12D_RS06160 500665e83cad0a54cc4368980c5a03b8 387 Pfam PF12680 SnoaL-like domain 274 372 4.2E-9 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RPIC12D_RS06160 500665e83cad0a54cc4368980c5a03b8 387 SUPERFAMILY SSF53474 3 255 6.97E-59 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS06160 500665e83cad0a54cc4368980c5a03b8 387 PANTHER PTHR10992:SF771 3 257 4.4E-55 T 22-04-2016 RPIC12D_RS06160 500665e83cad0a54cc4368980c5a03b8 387 SMART SM00824 Thioesterase 29 221 0.0033 T 22-04-2016 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 RPIC12D_RS16835 52c0de96fba7b62c0053a794e6b3f476 395 SUPERFAMILY SSF54106 70 119 9.68E-8 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS16835 52c0de96fba7b62c0053a794e6b3f476 395 PANTHER PTHR34700 60 389 1.5E-36 T 22-04-2016 RPIC12D_RS16835 52c0de96fba7b62c0053a794e6b3f476 395 SMART SM00257 70 119 5.5E-5 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS16835 52c0de96fba7b62c0053a794e6b3f476 395 Gene3D G3DSA:3.10.350.10 70 118 9.8E-8 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS16835 52c0de96fba7b62c0053a794e6b3f476 395 PANTHER PTHR34700:SF2 60 389 1.5E-36 T 22-04-2016 RPIC12D_RS16835 52c0de96fba7b62c0053a794e6b3f476 395 Pfam PF01476 LysM domain 71 116 3.7E-11 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS02260 e28f83a5c323de5c9489af7483829214 216 PANTHER PTHR30231 1 210 9.2E-73 T 22-04-2016 RPIC12D_RS02260 e28f83a5c323de5c9489af7483829214 216 SMART SM00479 37 216 2.8E-24 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIC12D_RS02260 e28f83a5c323de5c9489af7483829214 216 SUPERFAMILY SSF53098 37 212 7.17E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS02260 e28f83a5c323de5c9489af7483829214 216 Gene3D G3DSA:3.30.420.10 36 212 8.6E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS02260 e28f83a5c323de5c9489af7483829214 216 Pfam PF00929 Exonuclease 39 206 2.2E-19 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIC12D_RS02260 e28f83a5c323de5c9489af7483829214 216 PANTHER PTHR30231:SF7 1 210 9.2E-73 T 22-04-2016 RPIC12D_RS15105 0cd198dfa71bad39ccf3d173b711edec 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 1.9E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS15105 0cd198dfa71bad39ccf3d173b711edec 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 1.9E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS15105 0cd198dfa71bad39ccf3d173b711edec 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 1.9E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS15105 0cd198dfa71bad39ccf3d173b711edec 222 Gene3D G3DSA:1.10.10.10 159 217 1.6E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS15105 0cd198dfa71bad39ccf3d173b711edec 222 SMART SM00421 154 211 1.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS15105 0cd198dfa71bad39ccf3d173b711edec 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 210 1.5E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS15105 0cd198dfa71bad39ccf3d173b711edec 222 PANTHER PTHR26402:SF458 5 217 2.1E-44 T 22-04-2016 RPIC12D_RS15105 0cd198dfa71bad39ccf3d173b711edec 222 SUPERFAMILY SSF52172 4 135 1.42E-20 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS15105 0cd198dfa71bad39ccf3d173b711edec 222 SMART SM00448 5 121 1.6E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS15105 0cd198dfa71bad39ccf3d173b711edec 222 Gene3D G3DSA:3.40.50.2300 3 158 8.5E-23 T 22-04-2016 RPIC12D_RS15105 0cd198dfa71bad39ccf3d173b711edec 222 PANTHER PTHR26402 5 217 2.1E-44 T 22-04-2016 RPIC12D_RS15105 0cd198dfa71bad39ccf3d173b711edec 222 Pfam PF00072 Response regulator receiver domain 8 119 5.8E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS15105 0cd198dfa71bad39ccf3d173b711edec 222 SUPERFAMILY SSF46894 146 217 1.6E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS16275 a966d10657ff768a3a9965153b40381c 594 PANTHER PTHR30151 386 591 8.5E-159 T 22-04-2016 RPIC12D_RS16275 a966d10657ff768a3a9965153b40381c 594 PANTHER PTHR30151 84 242 8.5E-159 T 22-04-2016 RPIC12D_RS16275 a966d10657ff768a3a9965153b40381c 594 PANTHER PTHR30151:SF10 386 591 8.5E-159 T 22-04-2016 RPIC12D_RS16275 a966d10657ff768a3a9965153b40381c 594 PANTHER PTHR30151:SF10 84 242 8.5E-159 T 22-04-2016 RPIC12D_RS16275 a966d10657ff768a3a9965153b40381c 594 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 409 592 7.1E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS16275 a966d10657ff768a3a9965153b40381c 594 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 271 1.0E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS16275 a966d10657ff768a3a9965153b40381c 594 Gene3D G3DSA:1.10.3720.10 81 271 8.1E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS16275 a966d10657ff768a3a9965153b40381c 594 Gene3D G3DSA:1.10.3720.10 391 580 3.4E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS16275 a966d10657ff768a3a9965153b40381c 594 SUPERFAMILY SSF161098 79 275 3.14E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS16275 a966d10657ff768a3a9965153b40381c 594 SUPERFAMILY SSF161098 389 579 3.4E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS09430 5a261d2590c152f47f04889220a8f806 376 Gene3D G3DSA:2.40.110.10 118 209 8.8E-17 T 22-04-2016 RPIC12D_RS09430 5a261d2590c152f47f04889220a8f806 376 PANTHER PTHR10909:SF341 1 360 2.4E-75 T 22-04-2016 RPIC12D_RS09430 5a261d2590c152f47f04889220a8f806 376 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 94 1.1E-11 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS09430 5a261d2590c152f47f04889220a8f806 376 SUPERFAMILY SSF47203 223 367 1.43E-33 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS09430 5a261d2590c152f47f04889220a8f806 376 PANTHER PTHR10909 1 360 2.4E-75 T 22-04-2016 RPIC12D_RS09430 5a261d2590c152f47f04889220a8f806 376 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 118 210 2.1E-15 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC12D_RS09430 5a261d2590c152f47f04889220a8f806 376 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 351 2.9E-22 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS09430 5a261d2590c152f47f04889220a8f806 376 Gene3D G3DSA:1.10.540.10 1 101 2.3E-15 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS09430 5a261d2590c152f47f04889220a8f806 376 Gene3D G3DSA:1.20.140.10 210 360 3.9E-32 T 22-04-2016 RPIC12D_RS09430 5a261d2590c152f47f04889220a8f806 376 SUPERFAMILY SSF56645 1 215 5.63E-43 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC12D_RS06565 c474b6cf90c26bb36b20e3f3ddc9a1b4 175 PANTHER PTHR23091 6 165 1.3E-24 T 22-04-2016 RPIC12D_RS06565 c474b6cf90c26bb36b20e3f3ddc9a1b4 175 SUPERFAMILY SSF55729 25 165 3.55E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS06565 c474b6cf90c26bb36b20e3f3ddc9a1b4 175 Gene3D G3DSA:3.40.630.30 25 167 4.1E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS06565 c474b6cf90c26bb36b20e3f3ddc9a1b4 175 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 31 163 7.6E-34 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 RPIC12D_RS06565 c474b6cf90c26bb36b20e3f3ddc9a1b4 175 Pfam PF00583 Acetyltransferase (GNAT) family 69 140 1.1E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC12D_RS10120 e10105adefb3b0d128adbc6a77d0d490 355 Pfam PF13692 Glycosyl transferases group 1 195 312 2.1E-10 T 22-04-2016 RPIC12D_RS10120 e10105adefb3b0d128adbc6a77d0d490 355 PANTHER PTHR12526:SF397 14 316 8.8E-28 T 22-04-2016 RPIC12D_RS10120 e10105adefb3b0d128adbc6a77d0d490 355 Gene3D G3DSA:3.40.50.2000 149 315 1.7E-16 T 22-04-2016 RPIC12D_RS10120 e10105adefb3b0d128adbc6a77d0d490 355 SUPERFAMILY SSF53756 3 346 2.69E-46 T 22-04-2016 RPIC12D_RS10120 e10105adefb3b0d128adbc6a77d0d490 355 PANTHER PTHR12526 14 316 8.8E-28 T 22-04-2016 RPIC12D_RS10120 e10105adefb3b0d128adbc6a77d0d490 355 Pfam PF13439 Glycosyltransferase Family 4 14 166 4.8E-16 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RPIC12D_RS15280 2e158909f1cfc270a80027c7a5d85947 164 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 33 2.2E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS15280 2e158909f1cfc270a80027c7a5d85947 164 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 10 33 8.0E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS15280 2e158909f1cfc270a80027c7a5d85947 164 Pfam PF12019 Type II transport protein GspH 49 151 6.8E-7 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RPIC12D_RS15280 2e158909f1cfc270a80027c7a5d85947 164 Gene3D G3DSA:3.30.700.10 14 45 1.9E-4 T 22-04-2016 RPIC12D_RS15280 2e158909f1cfc270a80027c7a5d85947 164 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS15280 2e158909f1cfc270a80027c7a5d85947 164 Gene3D G3DSA:3.55.40.10 46 107 3.5E-6 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RPIC12D_RS15280 2e158909f1cfc270a80027c7a5d85947 164 SUPERFAMILY SSF54523 14 92 7.85E-14 T 22-04-2016 RPIC12D_RS15280 2e158909f1cfc270a80027c7a5d85947 164 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 12 152 1.9E-23 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 RPIC12D_RS08645 35c3f0a2b3739812ccd1b4d73161c46a 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 291 3.1E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS08645 35c3f0a2b3739812ccd1b4d73161c46a 294 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 30 292 8.6E-79 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 RPIC12D_RS08645 35c3f0a2b3739812ccd1b4d73161c46a 294 PANTHER PTHR30425 19 294 9.0E-114 T 22-04-2016 RPIC12D_RS08645 35c3f0a2b3739812ccd1b4d73161c46a 294 PANTHER PTHR30425:SF0 19 294 9.0E-114 T 22-04-2016 RPIC12D_RS08645 35c3f0a2b3739812ccd1b4d73161c46a 294 Gene3D G3DSA:1.10.3720.10 79 291 2.6E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS08645 35c3f0a2b3739812ccd1b4d73161c46a 294 SUPERFAMILY SSF161098 34 286 8.9E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS00640 16f2b9757c301aa984a5a680cf379571 232 Gene3D G3DSA:3.40.50.1000 100 227 4.0E-41 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS00640 16f2b9757c301aa984a5a680cf379571 232 Gene3D G3DSA:3.40.50.1000 6 28 4.0E-41 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS00640 16f2b9757c301aa984a5a680cf379571 232 PANTHER PTHR18901 1 227 6.0E-58 T 22-04-2016 RPIC12D_RS00640 16f2b9757c301aa984a5a680cf379571 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 102 198 1.4E-14 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS00640 16f2b9757c301aa984a5a680cf379571 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 160 2.6E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS00640 16f2b9757c301aa984a5a680cf379571 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 109 122 2.6E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS00640 16f2b9757c301aa984a5a680cf379571 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 14 25 2.6E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS00640 16f2b9757c301aa984a5a680cf379571 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 162 182 2.6E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS00640 16f2b9757c301aa984a5a680cf379571 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 17 199 9.3E-26 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS00640 16f2b9757c301aa984a5a680cf379571 232 Gene3D G3DSA:1.10.150.240 29 95 1.0E-11 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RPIC12D_RS00640 16f2b9757c301aa984a5a680cf379571 232 PANTHER PTHR18901:SF9 1 227 6.0E-58 T 22-04-2016 RPIC12D_RS00640 16f2b9757c301aa984a5a680cf379571 232 SUPERFAMILY SSF56784 13 227 4.43E-51 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS10360 37e02fac6b92a4b53e8b5b8aa24de510 233 Pfam PF00005 ABC transporter 20 159 2.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS10360 37e02fac6b92a4b53e8b5b8aa24de510 233 PANTHER PTHR24220:SF568 6 222 2.0E-87 T 22-04-2016 RPIC12D_RS10360 37e02fac6b92a4b53e8b5b8aa24de510 233 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS10360 37e02fac6b92a4b53e8b5b8aa24de510 233 Gene3D G3DSA:3.40.50.300 2 222 1.0E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10360 37e02fac6b92a4b53e8b5b8aa24de510 233 PANTHER PTHR24220 6 222 2.0E-87 T 22-04-2016 RPIC12D_RS10360 37e02fac6b92a4b53e8b5b8aa24de510 233 SMART SM00382 29 209 4.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS10360 37e02fac6b92a4b53e8b5b8aa24de510 233 SUPERFAMILY SSF52540 4 223 1.21E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 SUPERFAMILY SSF81442 53 570 1.01E-176 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 PANTHER PTHR10422 43 623 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 393 411 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 421 440 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 107 130 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 176 188 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 288 309 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 379 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 134 158 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 471 492 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 334 349 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 237 256 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 57 82 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 208 226 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 290 344 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 12 656 0.0 T 22-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 Gene3D G3DSA:1.20.210.10 51 586 6.1E-187 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 PANTHER PTHR10422:SF26 43 623 0.0 T 22-04-2016 RPIC12D_RS07775 a273886e923586f3b3f5a354d1d668ad 667 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 66 513 2.1E-135 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS13290 063f897b4d0dd7750a1c9f9080fa4b99 372 PANTHER PTHR11063:SF6 7 372 6.6E-117 T 22-04-2016 RPIC12D_RS13290 063f897b4d0dd7750a1c9f9080fa4b99 372 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC12D_RS13290 063f897b4d0dd7750a1c9f9080fa4b99 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 9 370 4.0E-131 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC12D_RS13290 063f897b4d0dd7750a1c9f9080fa4b99 372 Pfam PF00696 Amino acid kinase family 10 238 2.1E-42 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC12D_RS13290 063f897b4d0dd7750a1c9f9080fa4b99 372 SUPERFAMILY SSF88697 280 371 1.37E-23 T 22-04-2016 IPR015947 PUA-like domain RPIC12D_RS13290 063f897b4d0dd7750a1c9f9080fa4b99 372 PIRSF PIRSF000729 4 372 2.6E-133 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC12D_RS13290 063f897b4d0dd7750a1c9f9080fa4b99 372 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 4.0E-49 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RPIC12D_RS13290 063f897b4d0dd7750a1c9f9080fa4b99 372 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 4.0E-49 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RPIC12D_RS13290 063f897b4d0dd7750a1c9f9080fa4b99 372 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 4.0E-49 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RPIC12D_RS13290 063f897b4d0dd7750a1c9f9080fa4b99 372 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 4.0E-49 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RPIC12D_RS13290 063f897b4d0dd7750a1c9f9080fa4b99 372 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 4.0E-49 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RPIC12D_RS13290 063f897b4d0dd7750a1c9f9080fa4b99 372 SUPERFAMILY SSF53633 9 259 1.7E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC12D_RS13290 063f897b4d0dd7750a1c9f9080fa4b99 372 SMART SM00359 281 364 2.6E-18 T 22-04-2016 IPR002478 PUA domain GO:0003723 RPIC12D_RS13290 063f897b4d0dd7750a1c9f9080fa4b99 372 PANTHER PTHR11063 7 372 6.6E-117 T 22-04-2016 RPIC12D_RS13290 063f897b4d0dd7750a1c9f9080fa4b99 372 Gene3D G3DSA:2.30.130.10 278 370 2.4E-27 T 22-04-2016 IPR015947 PUA-like domain RPIC12D_RS13290 063f897b4d0dd7750a1c9f9080fa4b99 372 Gene3D G3DSA:3.40.1160.10 6 260 6.8E-58 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC12D_RS13290 063f897b4d0dd7750a1c9f9080fa4b99 372 Pfam PF01472 PUA domain 281 355 1.1E-22 T 22-04-2016 IPR002478 PUA domain GO:0003723 RPIC12D_RS13290 063f897b4d0dd7750a1c9f9080fa4b99 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 262 36.598 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC12D_RS04480 4afc3e938d056d1be89d089172b538fb 303 SUPERFAMILY SSF53850 10 275 4.44E-65 T 22-04-2016 RPIC12D_RS04480 4afc3e938d056d1be89d089172b538fb 303 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 272 1.8E-48 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS04480 4afc3e938d056d1be89d089172b538fb 303 PANTHER PTHR30085:SF2 4 299 2.2E-101 T 22-04-2016 RPIC12D_RS04480 4afc3e938d056d1be89d089172b538fb 303 Gene3D G3DSA:3.40.190.10 40 126 1.4E-28 T 22-04-2016 RPIC12D_RS04480 4afc3e938d056d1be89d089172b538fb 303 Gene3D G3DSA:3.40.190.10 235 276 1.4E-28 T 22-04-2016 RPIC12D_RS04480 4afc3e938d056d1be89d089172b538fb 303 SMART SM00062 42 274 2.0E-52 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS04480 4afc3e938d056d1be89d089172b538fb 303 Gene3D G3DSA:3.40.190.10 127 234 1.5E-27 T 22-04-2016 RPIC12D_RS04480 4afc3e938d056d1be89d089172b538fb 303 PANTHER PTHR30085 4 299 2.2E-101 T 22-04-2016 RPIC12D_RS04480 4afc3e938d056d1be89d089172b538fb 303 SMART SM00079 42 273 0.0086 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 RPIC12D_RS16005 e7245b4267a8c8cc21a421f5d498c34c 293 ProSitePatterns PS00449 ATP synthase a subunit signature. 216 225 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site RPIC12D_RS16005 e7245b4267a8c8cc21a421f5d498c34c 293 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 43 288 3.5E-42 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RPIC12D_RS16005 e7245b4267a8c8cc21a421f5d498c34c 293 Pfam PF00119 ATP synthase A chain 51 286 8.2E-52 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RPIC12D_RS16005 e7245b4267a8c8cc21a421f5d498c34c 293 Hamap MF_01393 ATP synthase subunit a [atpB]. 24 293 14.019 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RPIC12D_RS16005 e7245b4267a8c8cc21a421f5d498c34c 293 PANTHER PTHR11410:SF7 147 293 2.9E-71 T 22-04-2016 RPIC12D_RS16005 e7245b4267a8c8cc21a421f5d498c34c 293 PANTHER PTHR11410:SF7 46 127 2.9E-71 T 22-04-2016 RPIC12D_RS16005 e7245b4267a8c8cc21a421f5d498c34c 293 SUPERFAMILY SSF81336 101 287 8.24E-39 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RPIC12D_RS16005 e7245b4267a8c8cc21a421f5d498c34c 293 PANTHER PTHR11410 147 293 2.9E-71 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RPIC12D_RS16005 e7245b4267a8c8cc21a421f5d498c34c 293 PANTHER PTHR11410 46 127 2.9E-71 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RPIC12D_RS16005 e7245b4267a8c8cc21a421f5d498c34c 293 Gene3D G3DSA:1.20.120.220 104 293 1.5E-48 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RPIC12D_RS22860 da068f8a8dc57928495b6dfae4c486f6 313 Gene3D G3DSA:3.20.20.70 84 313 2.4E-99 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS22860 da068f8a8dc57928495b6dfae4c486f6 313 PANTHER PTHR10683:SF18 74 313 3.6E-138 T 22-04-2016 RPIC12D_RS22860 da068f8a8dc57928495b6dfae4c486f6 313 SUPERFAMILY SSF51569 84 313 5.55E-88 T 22-04-2016 RPIC12D_RS22860 da068f8a8dc57928495b6dfae4c486f6 313 ProSitePatterns PS01054 Transaldolase signature 1. 113 121 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC12D_RS22860 da068f8a8dc57928495b6dfae4c486f6 313 PANTHER PTHR10683 74 313 3.6E-138 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC12D_RS22860 da068f8a8dc57928495b6dfae4c486f6 313 Pfam PF00923 Transaldolase 96 313 1.1E-77 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC12D_RS11080 1435fd53e525a871365b0e87814b28f1 256 Pfam PF02654 Cobalamin-5-phosphate synthase 14 247 8.1E-54 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 RPIC12D_RS11080 1435fd53e525a871365b0e87814b28f1 256 PANTHER PTHR34148 1 256 9.0E-55 T 22-04-2016 RPIC12D_RS11080 1435fd53e525a871365b0e87814b28f1 256 PANTHER PTHR34148:SF1 1 256 9.0E-55 T 22-04-2016 RPIC12D_RS11080 1435fd53e525a871365b0e87814b28f1 256 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 9 249 1.2E-34 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 RPIC12D_RS11080 1435fd53e525a871365b0e87814b28f1 256 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 256 53.102 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 RPIC12D_RS10385 378621d924aee9f6edad590cf524ea72 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 1.7E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS10385 378621d924aee9f6edad590cf524ea72 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 1.7E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS10385 378621d924aee9f6edad590cf524ea72 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 206 220 1.7E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS10385 378621d924aee9f6edad590cf524ea72 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 1.7E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS10385 378621d924aee9f6edad590cf524ea72 270 PANTHER PTHR10992 18 261 7.3E-62 T 22-04-2016 RPIC12D_RS10385 378621d924aee9f6edad590cf524ea72 270 PANTHER PTHR10992:SF861 18 261 7.3E-62 T 22-04-2016 RPIC12D_RS10385 378621d924aee9f6edad590cf524ea72 270 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 10 260 2.3E-103 T 22-04-2016 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185|UniPathway: UPA00157 RPIC12D_RS10385 378621d924aee9f6edad590cf524ea72 270 Pfam PF00561 alpha/beta hydrolase fold 24 246 9.4E-21 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS10385 378621d924aee9f6edad590cf524ea72 270 SUPERFAMILY SSF53474 1 259 1.97E-56 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS10385 378621d924aee9f6edad590cf524ea72 270 Gene3D G3DSA:3.40.50.1820 2 260 8.2E-57 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS17075 9c11098fee529f8b2eee5eefcf1f7734 684 PANTHER PTHR30252 5 682 0.0 T 22-04-2016 RPIC12D_RS17075 9c11098fee529f8b2eee5eefcf1f7734 684 Pfam PF02554 Carbon starvation protein CstA 32 408 1.7E-170 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 RPIC12D_RS17075 9c11098fee529f8b2eee5eefcf1f7734 684 PANTHER PTHR30252:SF3 5 682 0.0 T 22-04-2016 RPIC12D_RS17075 9c11098fee529f8b2eee5eefcf1f7734 684 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 1.0E-34 T 22-04-2016 IPR025299 CstA, C-terminal domain RPIC12D_RS15335 0d35e0b4b70a57725cfa7b92ba50b561 227 SUPERFAMILY SSF50475 7 188 1.26E-58 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RPIC12D_RS15335 0d35e0b4b70a57725cfa7b92ba50b561 227 PANTHER PTHR34071:SF2 1 214 5.1E-52 T 22-04-2016 RPIC12D_RS15335 0d35e0b4b70a57725cfa7b92ba50b561 227 PANTHER PTHR34071 1 214 5.1E-52 T 22-04-2016 RPIC12D_RS15335 0d35e0b4b70a57725cfa7b92ba50b561 227 Gene3D G3DSA:2.30.110.10 2 188 2.7E-77 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RPIC12D_RS15335 0d35e0b4b70a57725cfa7b92ba50b561 227 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 25 166 6.7E-42 T 22-04-2016 IPR024747 Pyridoxamine 5'-phosphate oxidase-related RPIC12D_RS12350 4feb75de8a24d56d7465fe0d389331ed 135 Gene3D G3DSA:3.10.50.30 48 133 5.5E-28 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RPIC12D_RS12350 4feb75de8a24d56d7465fe0d389331ed 135 SUPERFAMILY SSF54534 49 124 4.45E-17 T 22-04-2016 RPIC12D_RS12350 4feb75de8a24d56d7465fe0d389331ed 135 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 123 1.1E-22 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RPIC12D_RS12350 4feb75de8a24d56d7465fe0d389331ed 135 PANTHER PTHR30437 1 133 2.8E-38 T 22-04-2016 RPIC12D_RS12350 4feb75de8a24d56d7465fe0d389331ed 135 PANTHER PTHR30437:SF5 1 133 2.8E-38 T 22-04-2016 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 Pfam PF00122 E1-E2 ATPase 308 527 1.7E-50 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 SUPERFAMILY SSF56784 614 840 1.96E-43 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 SUPERFAMILY SSF56784 535 554 1.96E-43 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 SUPERFAMILY SSF55008 118 190 2.36E-19 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 Gene3D G3DSA:3.30.70.100 121 188 2.3E-20 T 22-04-2016 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 SUPERFAMILY SSF81653 349 437 3.27E-20 T 22-04-2016 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 PANTHER PTHR24093 107 845 3.5E-161 T 22-04-2016 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 Gene3D G3DSA:2.70.150.10 287 439 2.4E-20 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 257 843 1.5E-132 T 22-04-2016 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 538 544 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 772 797 5.7E-6 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 741 757 5.7E-6 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 SUPERFAMILY SSF81665 790 819 2.09E-13 T 22-04-2016 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 SUPERFAMILY SSF81665 439 530 2.09E-13 T 22-04-2016 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 SUPERFAMILY SSF81665 201 278 2.09E-13 T 22-04-2016 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 311 569 2.2E-32 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 653 818 3.5E-32 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 32 116 1.9E-19 T 22-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 PANTHER PTHR24093:SF50 107 845 3.5E-161 T 22-04-2016 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 ProSitePatterns PS01047 Heavy-metal-associated domain. 127 156 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 Pfam PF00702 haloacid dehalogenase-like hydrolase 535 754 2.1E-31 T 22-04-2016 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 Gene3D G3DSA:3.40.50.1000 661 809 3.3E-45 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 Gene3D G3DSA:3.40.50.1000 509 552 3.3E-45 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 275 843 1.4E-144 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 741 760 1.0E-19 T 22-04-2016 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 666 677 1.0E-19 T 22-04-2016 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 536 550 1.0E-19 T 22-04-2016 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 388 402 1.0E-19 T 22-04-2016 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 764 776 1.0E-19 T 22-04-2016 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 688 698 1.0E-19 T 22-04-2016 RPIC12D_RS06010 e4e5b5a6380f1a21bf8c287cb77cc5da 847 Pfam PF00403 Heavy-metal-associated domain 125 185 8.5E-11 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC12D_RS05890 0286ec7a1b58b444b27056499c4b1771 465 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 36 465 2.1E-214 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 RPIC12D_RS05890 0286ec7a1b58b444b27056499c4b1771 465 SUPERFAMILY SSF55729 320 443 3.95E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS05890 0286ec7a1b58b444b27056499c4b1771 465 Gene3D G3DSA:3.40.630.30 321 464 4.8E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS05890 0286ec7a1b58b444b27056499c4b1771 465 SUPERFAMILY SSF53633 33 315 1.57E-66 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC12D_RS05890 0286ec7a1b58b444b27056499c4b1771 465 Gene3D G3DSA:3.40.1160.10 51 313 1.1E-64 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC12D_RS05890 0286ec7a1b58b444b27056499c4b1771 465 PANTHER PTHR30602 32 465 1.4E-159 T 22-04-2016 RPIC12D_RS05890 0286ec7a1b58b444b27056499c4b1771 465 Pfam PF00583 Acetyltransferase (GNAT) family 364 436 4.7E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC12D_RS05890 0286ec7a1b58b444b27056499c4b1771 465 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 34 465 205.376 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 RPIC12D_RS05890 0286ec7a1b58b444b27056499c4b1771 465 PIRSF PIRSF000423 27 465 8.1E-189 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 RPIC12D_RS05890 0286ec7a1b58b444b27056499c4b1771 465 Pfam PF00696 Amino acid kinase family 53 291 3.1E-27 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC12D_RS07190 82ab4498b2d60cff4c899c6e102f5d68 468 Pfam PF00202 Aminotransferase class-III 41 448 5.5E-109 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS07190 82ab4498b2d60cff4c899c6e102f5d68 468 Gene3D G3DSA:3.40.640.10 79 353 6.9E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS07190 82ab4498b2d60cff4c899c6e102f5d68 468 PIRSF PIRSF000521 43 454 3.1E-28 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS07190 82ab4498b2d60cff4c899c6e102f5d68 468 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 28 449 3.7E-153 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 RPIC12D_RS07190 82ab4498b2d60cff4c899c6e102f5d68 468 Gene3D G3DSA:3.90.1150.10 18 78 2.2E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS07190 82ab4498b2d60cff4c899c6e102f5d68 468 Gene3D G3DSA:3.90.1150.10 356 453 2.2E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS07190 82ab4498b2d60cff4c899c6e102f5d68 468 PANTHER PTHR11986 20 457 5.6E-160 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS07190 82ab4498b2d60cff4c899c6e102f5d68 468 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 265 302 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS07190 82ab4498b2d60cff4c899c6e102f5d68 468 PANTHER PTHR11986:SF8 20 457 5.6E-160 T 22-04-2016 RPIC12D_RS07190 82ab4498b2d60cff4c899c6e102f5d68 468 SUPERFAMILY SSF53383 26 450 4.77E-118 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS15555 ab0629f6de630b251cedb25df15981a1 417 PRINTS PR00301 70kDa heat shock protein signature 120 140 2.4E-6 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS15555 ab0629f6de630b251cedb25df15981a1 417 PRINTS PR00301 70kDa heat shock protein signature 32 44 2.4E-6 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS15555 ab0629f6de630b251cedb25df15981a1 417 PRINTS PR00301 70kDa heat shock protein signature 186 196 2.4E-6 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS15555 ab0629f6de630b251cedb25df15981a1 417 PRINTS PR00301 70kDa heat shock protein signature 4 17 2.4E-6 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS15555 ab0629f6de630b251cedb25df15981a1 417 PANTHER PTHR19375 3 236 1.7E-96 T 22-04-2016 RPIC12D_RS15555 ab0629f6de630b251cedb25df15981a1 417 PANTHER PTHR19375 287 409 1.7E-96 T 22-04-2016 RPIC12D_RS15555 ab0629f6de630b251cedb25df15981a1 417 Gene3D G3DSA:3.30.420.40 181 220 2.1E-13 T 22-04-2016 RPIC12D_RS15555 ab0629f6de630b251cedb25df15981a1 417 Gene3D G3DSA:3.30.420.40 352 391 2.1E-13 T 22-04-2016 RPIC12D_RS15555 ab0629f6de630b251cedb25df15981a1 417 Pfam PF00012 Hsp70 protein 297 389 2.3E-9 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS15555 ab0629f6de630b251cedb25df15981a1 417 Pfam PF00012 Hsp70 protein 89 226 1.7E-10 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS15555 ab0629f6de630b251cedb25df15981a1 417 SUPERFAMILY SSF53067 6 171 1.08E-31 T 22-04-2016 RPIC12D_RS15555 ab0629f6de630b251cedb25df15981a1 417 PANTHER PTHR19375:SF182 3 236 1.7E-96 T 22-04-2016 RPIC12D_RS15555 ab0629f6de630b251cedb25df15981a1 417 PANTHER PTHR19375:SF182 287 409 1.7E-96 T 22-04-2016 RPIC12D_RS15555 ab0629f6de630b251cedb25df15981a1 417 SUPERFAMILY SSF53067 175 243 4.09E-31 T 22-04-2016 RPIC12D_RS15555 ab0629f6de630b251cedb25df15981a1 417 SUPERFAMILY SSF53067 292 413 4.09E-31 T 22-04-2016 RPIC12D_RS15555 ab0629f6de630b251cedb25df15981a1 417 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 370 384 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RPIC12D_RS15555 ab0629f6de630b251cedb25df15981a1 417 Gene3D G3DSA:3.30.420.40 101 180 4.4E-29 T 22-04-2016 RPIC12D_RS15555 ab0629f6de630b251cedb25df15981a1 417 Gene3D G3DSA:3.30.420.40 6 68 4.4E-29 T 22-04-2016 RPIC12D_RS07620 743bab6ca0d666c8eba3904d57ab4a1b 346 Gene3D G3DSA:3.40.190.10 26 141 2.5E-15 T 22-04-2016 RPIC12D_RS07620 743bab6ca0d666c8eba3904d57ab4a1b 346 Pfam PF13416 Bacterial extracellular solute-binding protein 46 309 1.6E-46 T 22-04-2016 RPIC12D_RS07620 743bab6ca0d666c8eba3904d57ab4a1b 346 PANTHER PTHR30222:SF2 8 346 6.3E-148 T 22-04-2016 RPIC12D_RS07620 743bab6ca0d666c8eba3904d57ab4a1b 346 SUPERFAMILY SSF53850 26 343 1.98E-68 T 22-04-2016 RPIC12D_RS07620 743bab6ca0d666c8eba3904d57ab4a1b 346 PANTHER PTHR30222 8 346 6.3E-148 T 22-04-2016 RPIC12D_RS07620 743bab6ca0d666c8eba3904d57ab4a1b 346 Gene3D G3DSA:3.40.190.10 142 287 2.9E-36 T 22-04-2016 RPIC12D_RS14590 287a544d0812ce888f93626a3dfc23b6 395 Pfam PF01578 Cytochrome C assembly protein 186 390 3.2E-49 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RPIC12D_RS14590 287a544d0812ce888f93626a3dfc23b6 395 PANTHER PTHR30071 120 395 9.8E-67 T 22-04-2016 RPIC12D_RS14590 287a544d0812ce888f93626a3dfc23b6 395 PANTHER PTHR30071:SF5 120 395 9.8E-67 T 22-04-2016 RPIC12D_RS14590 287a544d0812ce888f93626a3dfc23b6 395 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 156 393 1.3E-74 T 22-04-2016 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 RPIC12D_RS08795 f4dcb3b4cbade2e495025cf745f4caf4 191 Gene3D G3DSA:3.10.20.30 22 96 1.1E-24 T 22-04-2016 IPR012675 Beta-grasp domain RPIC12D_RS08795 f4dcb3b4cbade2e495025cf745f4caf4 191 PANTHER PTHR11908 21 166 3.4E-37 T 22-04-2016 RPIC12D_RS08795 f4dcb3b4cbade2e495025cf745f4caf4 191 SUPERFAMILY SSF54292 18 109 4.04E-23 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS08795 f4dcb3b4cbade2e495025cf745f4caf4 191 Pfam PF01799 [2Fe-2S] binding domain 95 167 2.5E-27 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC12D_RS08795 f4dcb3b4cbade2e495025cf745f4caf4 191 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 61 69 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RPIC12D_RS08795 f4dcb3b4cbade2e495025cf745f4caf4 191 SUPERFAMILY SSF47741 101 174 1.44E-30 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC12D_RS08795 f4dcb3b4cbade2e495025cf745f4caf4 191 Gene3D G3DSA:1.10.150.120 97 177 9.4E-33 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC12D_RS08795 f4dcb3b4cbade2e495025cf745f4caf4 191 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 28 74 1.9E-6 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS12795 a442e52735b22980377d977aec318051 202 Gene3D G3DSA:1.20.1050.10 89 200 4.6E-22 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS12795 a442e52735b22980377d977aec318051 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 3.6E-18 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC12D_RS12795 a442e52735b22980377d977aec318051 202 SUPERFAMILY SSF47616 73 201 1.21E-26 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS12795 a442e52735b22980377d977aec318051 202 PANTHER PTHR11260 1 201 3.4E-47 T 22-04-2016 RPIC12D_RS12795 a442e52735b22980377d977aec318051 202 PANTHER PTHR11260:SF256 1 201 3.4E-47 T 22-04-2016 RPIC12D_RS12795 a442e52735b22980377d977aec318051 202 SUPERFAMILY SSF52833 1 100 1.27E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS12795 a442e52735b22980377d977aec318051 202 Pfam PF13410 Glutathione S-transferase, C-terminal domain 122 189 9.9E-13 T 22-04-2016 RPIC12D_RS12795 a442e52735b22980377d977aec318051 202 Gene3D G3DSA:3.40.30.10 1 88 2.3E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS08530 33a9813821ebe579c5f34d37f50bc84a 156 SUPERFAMILY SSF54909 62 149 9.25E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC12D_RS08530 33a9813821ebe579c5f34d37f50bc84a 156 Gene3D G3DSA:1.10.10.10 2 53 6.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08530 33a9813821ebe579c5f34d37f50bc84a 156 Gene3D G3DSA:3.30.70.920 55 137 2.6E-30 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC12D_RS08530 33a9813821ebe579c5f34d37f50bc84a 156 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RPIC12D_RS08530 33a9813821ebe579c5f34d37f50bc84a 156 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 2.1E-17 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS08530 33a9813821ebe579c5f34d37f50bc84a 156 PANTHER PTHR30154 1 150 1.3E-72 T 22-04-2016 RPIC12D_RS08530 33a9813821ebe579c5f34d37f50bc84a 156 PANTHER PTHR30154:SF17 1 150 1.3E-72 T 22-04-2016 RPIC12D_RS08530 33a9813821ebe579c5f34d37f50bc84a 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.6E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS08530 33a9813821ebe579c5f34d37f50bc84a 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.6E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS08530 33a9813821ebe579c5f34d37f50bc84a 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.6E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS08530 33a9813821ebe579c5f34d37f50bc84a 156 SUPERFAMILY SSF46785 1 60 4.55E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08530 33a9813821ebe579c5f34d37f50bc84a 156 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 4.0E-19 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC12D_RS08530 33a9813821ebe579c5f34d37f50bc84a 156 SMART SM00344 1 110 8.3E-40 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RPIC12D_RS07445 3c9b14fd04b75409eba1b74e1e1442ed 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 6.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07445 3c9b14fd04b75409eba1b74e1e1442ed 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 6.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07445 3c9b14fd04b75409eba1b74e1e1442ed 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 6.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07445 3c9b14fd04b75409eba1b74e1e1442ed 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 258 8.4E-56 T 22-04-2016 RPIC12D_RS07445 3c9b14fd04b75409eba1b74e1e1442ed 260 Gene3D G3DSA:3.40.50.720 5 259 2.2E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS07445 3c9b14fd04b75409eba1b74e1e1442ed 260 SUPERFAMILY SSF51735 12 259 1.31E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS07445 3c9b14fd04b75409eba1b74e1e1442ed 260 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 187 4.3E-4 T 22-04-2016 RPIC12D_RS07445 3c9b14fd04b75409eba1b74e1e1442ed 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 2.7E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07445 3c9b14fd04b75409eba1b74e1e1442ed 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 2.7E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07445 3c9b14fd04b75409eba1b74e1e1442ed 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.7E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07445 3c9b14fd04b75409eba1b74e1e1442ed 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 2.7E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07445 3c9b14fd04b75409eba1b74e1e1442ed 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 2.7E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07445 3c9b14fd04b75409eba1b74e1e1442ed 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 2.7E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07445 3c9b14fd04b75409eba1b74e1e1442ed 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC12D_RS07445 3c9b14fd04b75409eba1b74e1e1442ed 260 PANTHER PTHR24322 17 146 2.8E-58 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07445 3c9b14fd04b75409eba1b74e1e1442ed 260 PANTHER PTHR24322 166 198 2.8E-58 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS01700 4c9545e20230e3516b5ca1981a08b2cf 415 PIRSF PIRSF036542 2 415 2.8E-202 T 22-04-2016 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB RPIC12D_RS01700 4c9545e20230e3516b5ca1981a08b2cf 415 Pfam PF07670 Nucleoside recognition 50 155 5.6E-9 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 RPIC12D_RS01700 4c9545e20230e3516b5ca1981a08b2cf 415 Pfam PF07670 Nucleoside recognition 282 385 1.2E-5 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 RPIC12D_RS01700 4c9545e20230e3516b5ca1981a08b2cf 415 PANTHER PTHR35793 3 415 1.4E-177 T 22-04-2016 RPIC12D_RS01700 4c9545e20230e3516b5ca1981a08b2cf 415 PANTHER PTHR35793:SF2 3 415 1.4E-177 T 22-04-2016 RPIC12D_RS20795 14882c42f72736786a05c79a795e9c96 133 Pfam PF01610 Transposase 95 132 2.5E-7 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RPIC12D_RS20795 14882c42f72736786a05c79a795e9c96 133 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 31 80 1.0E-12 T 22-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain RPIC12D_RS13805 960524f54961432b4b2451470367baef 241 SUPERFAMILY SSF51366 10 222 5.76E-69 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RPIC12D_RS13805 960524f54961432b4b2451470367baef 241 Gene3D G3DSA:3.20.20.70 9 222 2.3E-89 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS13805 960524f54961432b4b2451470367baef 241 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 146 168 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RPIC12D_RS13805 960524f54961432b4b2451470367baef 241 PIRSF PIRSF001461 7 239 8.1E-99 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RPIC12D_RS13805 960524f54961432b4b2451470367baef 241 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 12 222 1.5E-91 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RPIC12D_RS13805 960524f54961432b4b2451470367baef 241 PANTHER PTHR11749 8 238 7.7E-115 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RPIC12D_RS13805 960524f54961432b4b2451470367baef 241 Pfam PF00834 Ribulose-phosphate 3 epimerase family 12 217 8.4E-88 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RPIC12D_RS13805 960524f54961432b4b2451470367baef 241 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 39 53 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RPIC12D_RS01780 c8caca7603abc94072426e7aae1453e9 161 PANTHER PTHR22769 1 139 3.1E-25 T 22-04-2016 RPIC12D_RS01780 c8caca7603abc94072426e7aae1453e9 161 PANTHER PTHR22769:SF28 1 139 3.1E-25 T 22-04-2016 RPIC12D_RS01780 c8caca7603abc94072426e7aae1453e9 161 Pfam PF00293 NUDIX domain 6 135 3.2E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC12D_RS01780 c8caca7603abc94072426e7aae1453e9 161 PRINTS PR01404 DATP pyrophosphohydrolase signature 69 88 1.4E-13 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RPIC12D_RS01780 c8caca7603abc94072426e7aae1453e9 161 PRINTS PR01404 DATP pyrophosphohydrolase signature 19 40 1.4E-13 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RPIC12D_RS01780 c8caca7603abc94072426e7aae1453e9 161 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 1.4E-13 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RPIC12D_RS01780 c8caca7603abc94072426e7aae1453e9 161 SUPERFAMILY SSF55811 5 146 1.31E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS01780 c8caca7603abc94072426e7aae1453e9 161 Gene3D G3DSA:3.90.79.10 4 147 1.2E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS06255 6901d790301394c53a7f9d294dc89865 95 TIGRFAM TIGR00165 S18: ribosomal protein bS18 24 91 1.7E-32 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06255 6901d790301394c53a7f9d294dc89865 95 ProSitePatterns PS00057 Ribosomal protein S18 signature. 40 63 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06255 6901d790301394c53a7f9d294dc89865 95 PANTHER PTHR13479 23 94 1.1E-22 T 22-04-2016 RPIC12D_RS06255 6901d790301394c53a7f9d294dc89865 95 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 40 92 2.0E-23 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06255 6901d790301394c53a7f9d294dc89865 95 PRINTS PR00974 Ribosomal protein S18 family signature 57 64 2.9E-14 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06255 6901d790301394c53a7f9d294dc89865 95 PRINTS PR00974 Ribosomal protein S18 family signature 79 89 2.9E-14 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06255 6901d790301394c53a7f9d294dc89865 95 PRINTS PR00974 Ribosomal protein S18 family signature 65 79 2.9E-14 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06255 6901d790301394c53a7f9d294dc89865 95 PRINTS PR00974 Ribosomal protein S18 family signature 47 57 2.9E-14 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06255 6901d790301394c53a7f9d294dc89865 95 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 21 92 19.619 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06255 6901d790301394c53a7f9d294dc89865 95 Gene3D G3DSA:4.10.640.10 27 93 3.2E-29 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06255 6901d790301394c53a7f9d294dc89865 95 SUPERFAMILY SSF46911 18 93 1.22E-27 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06255 6901d790301394c53a7f9d294dc89865 95 Pfam PF01084 Ribosomal protein S18 38 87 1.7E-21 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS07165 0ebf48876f5407985fad6a7b28d425c0 162 SUPERFAMILY SSF54427 3 161 9.39E-58 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS07165 0ebf48876f5407985fad6a7b28d425c0 162 TIGRFAM TIGR03232 benzo_1_2_benB: benzoate 1,2-dioxygenase, small subunit 8 162 1.3E-74 T 22-04-2016 IPR017641 Benzoate 1,2-dioxygenase, small subunit GO:0016708|GO:0055114 RPIC12D_RS07165 0ebf48876f5407985fad6a7b28d425c0 162 Gene3D G3DSA:3.10.450.50 3 155 6.0E-58 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS07165 0ebf48876f5407985fad6a7b28d425c0 162 Pfam PF00866 Ring hydroxylating beta subunit 14 154 6.8E-53 T 22-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 RPIC12D_RS07165 0ebf48876f5407985fad6a7b28d425c0 162 PANTHER PTHR41534:SF1 12 162 9.0E-66 T 22-04-2016 RPIC12D_RS07165 0ebf48876f5407985fad6a7b28d425c0 162 PANTHER PTHR41534 12 162 9.0E-66 T 22-04-2016 RPIC12D_RS02685 774bcad5e553a0f9b9bd300cf4a3b613 357 Gene3D G3DSA:3.90.550.10 11 136 2.6E-21 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS02685 774bcad5e553a0f9b9bd300cf4a3b613 357 PANTHER PTHR10859 13 344 5.4E-145 T 22-04-2016 RPIC12D_RS02685 774bcad5e553a0f9b9bd300cf4a3b613 357 SUPERFAMILY SSF53448 7 254 1.88E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS02685 774bcad5e553a0f9b9bd300cf4a3b613 357 Pfam PF00535 Glycosyl transferase family 2 15 176 6.8E-28 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RPIC12D_RS02685 774bcad5e553a0f9b9bd300cf4a3b613 357 PANTHER PTHR10859:SF81 13 344 5.4E-145 T 22-04-2016 RPIC12D_RS05070 fcc7b48f1a8a5bcc4efa32c2422d4c52 456 SUPERFAMILY SSF54826 18 148 5.56E-34 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIC12D_RS05070 fcc7b48f1a8a5bcc4efa32c2422d4c52 456 Gene3D G3DSA:3.20.20.120 130 163 1.8E-103 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC12D_RS05070 fcc7b48f1a8a5bcc4efa32c2422d4c52 456 Gene3D G3DSA:3.20.20.120 195 408 1.8E-103 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC12D_RS05070 fcc7b48f1a8a5bcc4efa32c2422d4c52 456 SMART SM00922 196 296 9.9E-18 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RPIC12D_RS05070 fcc7b48f1a8a5bcc4efa32c2422d4c52 456 SUPERFAMILY SSF51604 150 425 3.54E-84 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC12D_RS05070 fcc7b48f1a8a5bcc4efa32c2422d4c52 456 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 17 456 6.9E-264 T 22-04-2016 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499|UniPathway: UPA00564 RPIC12D_RS05070 fcc7b48f1a8a5bcc4efa32c2422d4c52 456 PANTHER PTHR13794:SF47 184 441 4.4E-282 T 22-04-2016 RPIC12D_RS05070 fcc7b48f1a8a5bcc4efa32c2422d4c52 456 PANTHER PTHR13794:SF47 18 163 4.4E-282 T 22-04-2016 RPIC12D_RS05070 fcc7b48f1a8a5bcc4efa32c2422d4c52 456 Pfam PF13378 Enolase C-terminal domain-like 200 415 8.9E-35 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC12D_RS05070 fcc7b48f1a8a5bcc4efa32c2422d4c52 456 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 51 148 5.5E-6 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RPIC12D_RS05070 fcc7b48f1a8a5bcc4efa32c2422d4c52 456 PANTHER PTHR13794 184 441 4.4E-282 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 RPIC12D_RS05070 fcc7b48f1a8a5bcc4efa32c2422d4c52 456 PANTHER PTHR13794 18 163 4.4E-282 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 RPIC12D_RS05070 fcc7b48f1a8a5bcc4efa32c2422d4c52 456 Gene3D G3DSA:3.30.390.10 20 129 3.9E-11 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIC12D_RS10245 430c086f857a21d0a294d57392b81443 303 PANTHER PTHR12001:SF23 3 268 5.7E-98 T 22-04-2016 RPIC12D_RS10245 430c086f857a21d0a294d57392b81443 303 PANTHER PTHR12001 3 268 5.7E-98 T 22-04-2016 IPR017446 Polyprenyl synthetase-related RPIC12D_RS10245 430c086f857a21d0a294d57392b81443 303 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RPIC12D_RS10245 430c086f857a21d0a294d57392b81443 303 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 98 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RPIC12D_RS10245 430c086f857a21d0a294d57392b81443 303 Pfam PF00348 Polyprenyl synthetase 31 258 4.5E-51 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RPIC12D_RS10245 430c086f857a21d0a294d57392b81443 303 Gene3D G3DSA:1.10.600.10 2 273 2.2E-85 T 22-04-2016 IPR008949 Isoprenoid synthase domain RPIC12D_RS10245 430c086f857a21d0a294d57392b81443 303 SUPERFAMILY SSF48576 6 271 8.8E-82 T 22-04-2016 IPR008949 Isoprenoid synthase domain RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 SUPERFAMILY SSF56719 30 528 4.32E-181 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 513 3.6E-155 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 810 856 2.6E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 760 806 1.1E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 595 642 1.1E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 545 592 2.8E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 653 695 4.8E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 700 745 1.3E-14 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 860 29.531 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 SMART SM00434 11 506 2.0E-287 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 PANTHER PTHR10169:SF48 457 826 0.0 T 22-04-2016 RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 PANTHER PTHR10169:SF48 2 414 0.0 T 22-04-2016 RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 857 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 Gene3D G3DSA:3.30.1360.40 236 333 4.9E-40 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 SUPERFAMILY SSF101904 540 865 1.57E-108 T 22-04-2016 RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 Gene3D G3DSA:2.120.10.90 538 856 6.8E-135 T 22-04-2016 RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 Gene3D G3DSA:3.90.199.10 34 216 2.3E-85 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 PANTHER PTHR10169 457 826 0.0 T 22-04-2016 RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 PANTHER PTHR10169 2 414 0.0 T 22-04-2016 RPIC12D_RS04200 3407db5c28f23cd068f912d8f36d4c18 889 Gene3D G3DSA:1.10.268.10 363 504 3.7E-48 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS11720 78257675f6d5b232fc1f1d125542b515 174 Pfam PF01252 Signal peptidase (SPase) II 30 168 6.5E-40 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC12D_RS11720 78257675f6d5b232fc1f1d125542b515 174 PANTHER PTHR33695 26 170 1.2E-54 T 22-04-2016 RPIC12D_RS11720 78257675f6d5b232fc1f1d125542b515 174 TIGRFAM TIGR00077 lspA: signal peptidase II 29 171 4.5E-43 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC12D_RS11720 78257675f6d5b232fc1f1d125542b515 174 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 21 174 17.112 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC12D_RS11720 78257675f6d5b232fc1f1d125542b515 174 PANTHER PTHR33695:SF1 26 170 1.2E-54 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC12D_RS11720 78257675f6d5b232fc1f1d125542b515 174 ProSitePatterns PS00855 Signal peptidases II signature. 117 129 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC12D_RS11720 78257675f6d5b232fc1f1d125542b515 174 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 114 129 7.2E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC12D_RS11720 78257675f6d5b232fc1f1d125542b515 174 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 150 166 7.2E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC12D_RS11720 78257675f6d5b232fc1f1d125542b515 174 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 67 75 7.2E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC12D_RS08580 0b0c97336402c1908b4c279f8198eb43 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 294 3.7E-122 T 22-04-2016 IPR017685 HTH-type transcriptional regulator ArgP RPIC12D_RS08580 0b0c97336402c1908b4c279f8198eb43 298 PANTHER PTHR30579 1 295 1.3E-109 T 22-04-2016 RPIC12D_RS08580 0b0c97336402c1908b4c279f8198eb43 298 PANTHER PTHR30579:SF2 1 295 1.3E-109 T 22-04-2016 RPIC12D_RS08580 0b0c97336402c1908b4c279f8198eb43 298 Gene3D G3DSA:1.10.10.10 3 80 5.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08580 0b0c97336402c1908b4c279f8198eb43 298 Pfam PF03466 LysR substrate binding domain 95 289 1.5E-17 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS08580 0b0c97336402c1908b4c279f8198eb43 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS08580 0b0c97336402c1908b4c279f8198eb43 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS08580 0b0c97336402c1908b4c279f8198eb43 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS08580 0b0c97336402c1908b4c279f8198eb43 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.5E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS08580 0b0c97336402c1908b4c279f8198eb43 298 SUPERFAMILY SSF46785 2 112 9.8E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08580 0b0c97336402c1908b4c279f8198eb43 298 SUPERFAMILY SSF53850 94 290 4.71E-23 T 22-04-2016 RPIC12D_RS08580 0b0c97336402c1908b4c279f8198eb43 298 Gene3D G3DSA:3.40.190.10 93 199 1.1E-42 T 22-04-2016 RPIC12D_RS15975 1175e20deec3b1cee0f8a62b3c2bd2e7 467 SUPERFAMILY SSF50615 3 81 3.66E-23 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS15975 1175e20deec3b1cee0f8a62b3c2bd2e7 467 PANTHER PTHR15184:SF44 1 467 0.0 T 22-04-2016 RPIC12D_RS15975 1175e20deec3b1cee0f8a62b3c2bd2e7 467 Gene3D G3DSA:1.10.1140.10 351 467 1.4E-55 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS15975 1175e20deec3b1cee0f8a62b3c2bd2e7 467 PANTHER PTHR15184 1 467 0.0 T 22-04-2016 RPIC12D_RS15975 1175e20deec3b1cee0f8a62b3c2bd2e7 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 466 56.495 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS15975 1175e20deec3b1cee0f8a62b3c2bd2e7 467 Gene3D G3DSA:2.40.10.170 3 81 2.2E-27 T 22-04-2016 RPIC12D_RS15975 1175e20deec3b1cee0f8a62b3c2bd2e7 467 SMART SM00382 148 333 0.001 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS15975 1175e20deec3b1cee0f8a62b3c2bd2e7 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 79 9.5E-17 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS15975 1175e20deec3b1cee0f8a62b3c2bd2e7 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 339 348 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS15975 1175e20deec3b1cee0f8a62b3c2bd2e7 467 SUPERFAMILY SSF47917 351 466 2.15E-54 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS15975 1175e20deec3b1cee0f8a62b3c2bd2e7 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 466 5.4E-249 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS15975 1175e20deec3b1cee0f8a62b3c2bd2e7 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 136 348 4.2E-63 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS15975 1175e20deec3b1cee0f8a62b3c2bd2e7 467 Gene3D G3DSA:3.40.50.300 82 349 1.5E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15975 1175e20deec3b1cee0f8a62b3c2bd2e7 467 SUPERFAMILY SSF52540 83 353 1.2E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14855 17f9a9832deca9088912202e13628c21 168 SUPERFAMILY SSF160369 4 159 5.62E-51 T 22-04-2016 RPIC12D_RS14855 17f9a9832deca9088912202e13628c21 168 PANTHER PTHR11560 2 159 9.6E-48 T 22-04-2016 RPIC12D_RS14855 17f9a9832deca9088912202e13628c21 168 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14855 17f9a9832deca9088912202e13628c21 168 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 27.128 T 22-04-2016 IPR022973 Ribosomal protein L10 RPIC12D_RS14855 17f9a9832deca9088912202e13628c21 168 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 68 138 0.009 T 22-04-2016 RPIC12D_RS14855 17f9a9832deca9088912202e13628c21 168 Pfam PF00466 Ribosomal protein L10 5 100 2.5E-24 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 RPIC12D_RS16950 71f661a1bdcc311e9f360b3516c64765 359 SUPERFAMILY SSF90002 265 358 5.75E-26 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RPIC12D_RS16950 71f661a1bdcc311e9f360b3516c64765 359 SUPERFAMILY SSF52540 5 206 3.77E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16950 71f661a1bdcc311e9f360b3516c64765 359 Gene3D G3DSA:3.30.1220.10 245 359 3.0E-34 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RPIC12D_RS16950 71f661a1bdcc311e9f360b3516c64765 359 Gene3D G3DSA:3.40.50.300 3 205 5.0E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16950 71f661a1bdcc311e9f360b3516c64765 359 SMART SM00833 265 358 3.3E-16 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RPIC12D_RS16950 71f661a1bdcc311e9f360b3516c64765 359 PANTHER PTHR13748:SF43 1 213 1.2E-124 T 22-04-2016 RPIC12D_RS16950 71f661a1bdcc311e9f360b3516c64765 359 PANTHER PTHR13748:SF43 241 359 1.2E-124 T 22-04-2016 RPIC12D_RS16950 71f661a1bdcc311e9f360b3516c64765 359 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 186 3.1E-55 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RPIC12D_RS16950 71f661a1bdcc311e9f360b3516c64765 359 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 265 358 4.7E-21 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RPIC12D_RS16950 71f661a1bdcc311e9f360b3516c64765 359 PANTHER PTHR13748 1 213 1.2E-124 T 22-04-2016 RPIC12D_RS16950 71f661a1bdcc311e9f360b3516c64765 359 PANTHER PTHR13748 241 359 1.2E-124 T 22-04-2016 RPIC12D_RS08610 37e0bd57e9c86c2ee20ef563319f9165 277 SUPERFAMILY SSF55729 41 250 1.22E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS08610 37e0bd57e9c86c2ee20ef563319f9165 277 Gene3D G3DSA:3.40.630.30 43 247 5.7E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS08610 37e0bd57e9c86c2ee20ef563319f9165 277 Pfam PF13444 Acetyltransferase (GNAT) domain 59 160 1.5E-36 T 22-04-2016 RPIC12D_RS08610 37e0bd57e9c86c2ee20ef563319f9165 277 PANTHER PTHR37323:SF1 40 275 3.5E-72 T 22-04-2016 RPIC12D_RS08610 37e0bd57e9c86c2ee20ef563319f9165 277 PANTHER PTHR37323 40 275 3.5E-72 T 22-04-2016 RPIC12D_RS06265 1d157920c39cc90dcdb3ddf16c484646 462 SUPERFAMILY SSF48024 13 124 1.31E-36 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RPIC12D_RS06265 1d157920c39cc90dcdb3ddf16c484646 462 SUPERFAMILY SSF52540 193 444 1.57E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06265 1d157920c39cc90dcdb3ddf16c484646 462 Pfam PF00772 DnaB-like helicase N terminal domain 15 116 2.9E-35 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RPIC12D_RS06265 1d157920c39cc90dcdb3ddf16c484646 462 Gene3D G3DSA:1.10.860.10 15 117 2.2E-38 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RPIC12D_RS06265 1d157920c39cc90dcdb3ddf16c484646 462 Pfam PF03796 DnaB-like helicase C terminal domain 195 450 1.6E-118 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 RPIC12D_RS06265 1d157920c39cc90dcdb3ddf16c484646 462 Gene3D G3DSA:3.40.50.300 179 451 3.9E-108 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06265 1d157920c39cc90dcdb3ddf16c484646 462 PANTHER PTHR30153 1 460 2.0E-212 T 22-04-2016 RPIC12D_RS06265 1d157920c39cc90dcdb3ddf16c484646 462 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 15 452 7.9E-179 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 RPIC12D_RS06265 1d157920c39cc90dcdb3ddf16c484646 462 SMART SM00382 212 417 0.0086 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS05975 214e69538b92d8f99a0cf18dc6544694 365 SUPERFAMILY SSF52540 4 244 6.96E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05975 214e69538b92d8f99a0cf18dc6544694 365 Pfam PF08402 TOBE domain 284 353 6.0E-5 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RPIC12D_RS05975 214e69538b92d8f99a0cf18dc6544694 365 SUPERFAMILY SSF50331 236 361 2.92E-25 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RPIC12D_RS05975 214e69538b92d8f99a0cf18dc6544694 365 PANTHER PTHR24220 5 264 1.3E-163 T 22-04-2016 RPIC12D_RS05975 214e69538b92d8f99a0cf18dc6544694 365 PANTHER PTHR24220 283 291 1.3E-163 T 22-04-2016 RPIC12D_RS05975 214e69538b92d8f99a0cf18dc6544694 365 Pfam PF00005 ABC transporter 20 161 5.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS05975 214e69538b92d8f99a0cf18dc6544694 365 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS05975 214e69538b92d8f99a0cf18dc6544694 365 Gene3D G3DSA:2.40.50.140 286 344 2.0E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS05975 214e69538b92d8f99a0cf18dc6544694 365 PANTHER PTHR24220:SF151 5 264 1.3E-163 T 22-04-2016 RPIC12D_RS05975 214e69538b92d8f99a0cf18dc6544694 365 PANTHER PTHR24220:SF151 283 291 1.3E-163 T 22-04-2016 RPIC12D_RS05975 214e69538b92d8f99a0cf18dc6544694 365 SMART SM00382 28 219 1.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS05975 214e69538b92d8f99a0cf18dc6544694 365 Gene3D G3DSA:3.40.50.300 3 234 2.1E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10095 e100f0dfae834a8fb4ef4c3ed50564f0 574 Gene3D G3DSA:1.20.1560.10 3 317 7.1E-68 T 22-04-2016 RPIC12D_RS10095 e100f0dfae834a8fb4ef4c3ed50564f0 574 Pfam PF00005 ABC transporter 348 500 7.1E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS10095 e100f0dfae834a8fb4ef4c3ed50564f0 574 SUPERFAMILY SSF52540 323 571 2.93E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10095 e100f0dfae834a8fb4ef4c3ed50564f0 574 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS10095 e100f0dfae834a8fb4ef4c3ed50564f0 574 Gene3D G3DSA:3.40.50.300 331 563 1.6E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10095 e100f0dfae834a8fb4ef4c3ed50564f0 574 PANTHER PTHR24221 1 571 2.2E-222 T 22-04-2016 RPIC12D_RS10095 e100f0dfae834a8fb4ef4c3ed50564f0 574 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 3 572 2.4E-264 T 22-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 RPIC12D_RS10095 e100f0dfae834a8fb4ef4c3ed50564f0 574 Pfam PF00664 ABC transporter transmembrane region 17 287 2.1E-44 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC12D_RS10095 e100f0dfae834a8fb4ef4c3ed50564f0 574 SMART SM00382 357 546 3.3E-21 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS10095 e100f0dfae834a8fb4ef4c3ed50564f0 574 SUPERFAMILY SSF90123 3 317 4.19E-68 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC12D_RS15375 e18350d7167fe21727013393ad55e530 386 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 101 111 1.3E-8 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS15375 e18350d7167fe21727013393ad55e530 386 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 188 200 1.3E-8 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS15375 e18350d7167fe21727013393ad55e530 386 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 57 68 1.3E-8 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS15375 e18350d7167fe21727013393ad55e530 386 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 319 336 1.3E-8 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS15375 e18350d7167fe21727013393ad55e530 386 Pfam PF13609 Gram-negative porin 7 343 5.7E-52 T 22-04-2016 RPIC12D_RS15375 e18350d7167fe21727013393ad55e530 386 PRINTS PR00184 Neisseria sp. porin signature 316 340 3.1E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS15375 e18350d7167fe21727013393ad55e530 386 PRINTS PR00184 Neisseria sp. porin signature 189 206 3.1E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS15375 e18350d7167fe21727013393ad55e530 386 PRINTS PR00184 Neisseria sp. porin signature 59 84 3.1E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS15375 e18350d7167fe21727013393ad55e530 386 SUPERFAMILY SSF56935 21 386 3.97E-84 T 22-04-2016 RPIC12D_RS15375 e18350d7167fe21727013393ad55e530 386 Gene3D G3DSA:2.40.160.10 21 386 6.3E-96 T 22-04-2016 IPR023614 Porin domain RPIC12D_RS14485 d9606c30b2b07ab2ce03116962910365 487 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 8.7E-20 T 22-04-2016 RPIC12D_RS14485 d9606c30b2b07ab2ce03116962910365 487 PRINTS PR00419 Adrenodoxin reductase family signature 296 310 8.7E-20 T 22-04-2016 RPIC12D_RS14485 d9606c30b2b07ab2ce03116962910365 487 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 8.7E-20 T 22-04-2016 RPIC12D_RS14485 d9606c30b2b07ab2ce03116962910365 487 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 486 1.4E-220 T 22-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 RPIC12D_RS14485 d9606c30b2b07ab2ce03116962910365 487 Gene3D G3DSA:1.10.1060.10 4 144 2.8E-40 T 22-04-2016 RPIC12D_RS14485 d9606c30b2b07ab2ce03116962910365 487 SUPERFAMILY SSF46548 2 154 2.62E-39 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIC12D_RS14485 d9606c30b2b07ab2ce03116962910365 487 Gene3D G3DSA:3.50.50.60 256 396 4.5E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS14485 d9606c30b2b07ab2ce03116962910365 487 Gene3D G3DSA:3.50.50.60 397 483 3.2E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS14485 d9606c30b2b07ab2ce03116962910365 487 SUPERFAMILY SSF51971 142 410 1.29E-66 T 22-04-2016 RPIC12D_RS14485 d9606c30b2b07ab2ce03116962910365 487 Gene3D G3DSA:3.50.50.60 145 255 2.9E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS14485 d9606c30b2b07ab2ce03116962910365 487 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 145 468 4.9E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS14485 d9606c30b2b07ab2ce03116962910365 487 PANTHER PTHR11938 345 480 5.2E-140 T 22-04-2016 RPIC12D_RS14485 d9606c30b2b07ab2ce03116962910365 487 PANTHER PTHR11938 36 329 5.2E-140 T 22-04-2016 RPIC12D_RS14485 d9606c30b2b07ab2ce03116962910365 487 PANTHER PTHR11938:SF75 345 480 5.2E-140 T 22-04-2016 RPIC12D_RS14485 d9606c30b2b07ab2ce03116962910365 487 PANTHER PTHR11938:SF75 36 329 5.2E-140 T 22-04-2016 RPIC12D_RS14485 d9606c30b2b07ab2ce03116962910365 487 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 131 1.9E-24 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II RPIC12D_RS14485 d9606c30b2b07ab2ce03116962910365 487 SUPERFAMILY SSF51971 371 480 2.12E-12 T 22-04-2016 RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 Pfam PF09369 Domain of unknown function (DUF1998) 1513 1615 6.7E-11 T 22-04-2016 IPR018973 DEAD/DEAH-box helicase, putative RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 Pfam PF00271 Helicase conserved C-terminal domain 961 1048 1.1E-8 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 Pfam PF00270 DEAD/DEAH box helicase 94 272 8.9E-25 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 Gene3D G3DSA:3.40.50.300 91 274 2.2E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 Gene3D G3DSA:3.40.50.300 960 1090 1.4E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 Gene3D G3DSA:3.40.50.300 608 644 1.4E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 PANTHER PTHR24031:SF307 1183 1262 1.1E-66 T 22-04-2016 RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 PANTHER PTHR24031:SF307 93 271 1.1E-66 T 22-04-2016 RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 PANTHER PTHR24031:SF307 933 983 1.1E-66 T 22-04-2016 RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 PANTHER PTHR24031:SF307 703 755 1.1E-66 T 22-04-2016 RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 PANTHER PTHR24031:SF307 1000 1081 1.1E-66 T 22-04-2016 RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 PANTHER PTHR24031:SF307 1727 1755 1.1E-66 T 22-04-2016 RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 SMART SM00490 950 1048 1.2E-11 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 SMART SM00487 88 297 1.3E-24 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 SUPERFAMILY SSF52540 91 274 2.77E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 SUPERFAMILY SSF52540 106 167 1.05E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 SUPERFAMILY SSF52540 949 1101 1.05E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 PANTHER PTHR24031 1183 1262 1.1E-66 T 22-04-2016 RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 PANTHER PTHR24031 93 271 1.1E-66 T 22-04-2016 RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 PANTHER PTHR24031 933 983 1.1E-66 T 22-04-2016 RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 PANTHER PTHR24031 703 755 1.1E-66 T 22-04-2016 RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 PANTHER PTHR24031 1000 1081 1.1E-66 T 22-04-2016 RPIC12D_RS13380 dfa02c81b8ebe3b5cb12043a63f31717 1770 PANTHER PTHR24031 1727 1755 1.1E-66 T 22-04-2016 RPIC12D_RS13005 3bf6930c69ccec365e3ae2c4604a8693 312 PANTHER PTHR22604:SF131 10 308 2.6E-111 T 22-04-2016 RPIC12D_RS13005 3bf6930c69ccec365e3ae2c4604a8693 312 PANTHER PTHR22604 10 308 2.6E-111 T 22-04-2016 RPIC12D_RS13005 3bf6930c69ccec365e3ae2c4604a8693 312 Gene3D G3DSA:3.40.50.720 7 185 4.8E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS13005 3bf6930c69ccec365e3ae2c4604a8693 312 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 9 118 4.9E-19 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RPIC12D_RS13005 3bf6930c69ccec365e3ae2c4604a8693 312 SUPERFAMILY SSF51735 7 169 1.46E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS01370 c2359da725d07b18d7af173e43413a52 208 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 93 21.343 T 22-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RPIC12D_RS01370 c2359da725d07b18d7af173e43413a52 208 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 93 1.0E-47 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RPIC12D_RS01370 c2359da725d07b18d7af173e43413a52 208 Gene3D G3DSA:2.40.240.10 2 93 2.2E-31 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RPIC12D_RS01370 c2359da725d07b18d7af173e43413a52 208 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 1 184 31.753 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RPIC12D_RS01370 c2359da725d07b18d7af173e43413a52 208 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 172 7.2E-45 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RPIC12D_RS01370 c2359da725d07b18d7af173e43413a52 208 Pfam PF01386 Ribosomal L25p family 5 90 7.4E-23 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RPIC12D_RS01370 c2359da725d07b18d7af173e43413a52 208 SUPERFAMILY SSF50715 2 192 4.36E-56 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 RPIC12D_RS01370 c2359da725d07b18d7af173e43413a52 208 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 98 186 2.3E-31 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain RPIC12D_RS01370 c2359da725d07b18d7af173e43413a52 208 PANTHER PTHR33284 5 204 5.1E-60 T 22-04-2016 RPIC12D_RS01370 c2359da725d07b18d7af173e43413a52 208 Gene3D G3DSA:2.170.120.20 96 192 1.1E-32 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain RPIC12D_RS16120 62591ff2c28cf229403072fde7ad9d40 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 68 83 6.2E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS16120 62591ff2c28cf229403072fde7ad9d40 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 6.2E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS16120 62591ff2c28cf229403072fde7ad9d40 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 226 240 6.2E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS16120 62591ff2c28cf229403072fde7ad9d40 289 SUPERFAMILY SSF53474 20 288 9.38E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS16120 62591ff2c28cf229403072fde7ad9d40 289 PANTHER PTHR11614:SF87 21 289 3.6E-76 T 22-04-2016 RPIC12D_RS16120 62591ff2c28cf229403072fde7ad9d40 289 Pfam PF12146 Serine aminopeptidase, S33 39 270 1.4E-73 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 RPIC12D_RS16120 62591ff2c28cf229403072fde7ad9d40 289 PANTHER PTHR11614 21 289 3.6E-76 T 22-04-2016 RPIC12D_RS16120 62591ff2c28cf229403072fde7ad9d40 289 Gene3D G3DSA:3.40.50.1820 21 287 9.7E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS21840 523488331a10813c1bd33c43d89617ee 358 Pfam PF00012 Hsp70 protein 1 357 9.5E-120 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS21840 523488331a10813c1bd33c43d89617ee 358 PANTHER PTHR19375:SF176 1 358 1.5E-187 T 22-04-2016 RPIC12D_RS21840 523488331a10813c1bd33c43d89617ee 358 PANTHER PTHR19375 1 358 1.5E-187 T 22-04-2016 RPIC12D_RS21840 523488331a10813c1bd33c43d89617ee 358 Gene3D G3DSA:3.90.640.10 65 140 9.1E-8 T 22-04-2016 RPIC12D_RS21840 523488331a10813c1bd33c43d89617ee 358 SUPERFAMILY SSF100920 215 357 2.09E-47 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RPIC12D_RS21840 523488331a10813c1bd33c43d89617ee 358 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 31 44 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RPIC12D_RS21840 523488331a10813c1bd33c43d89617ee 358 Gene3D G3DSA:3.30.420.40 1 36 1.2E-16 T 22-04-2016 RPIC12D_RS21840 523488331a10813c1bd33c43d89617ee 358 SUPERFAMILY SSF53067 27 206 1.15E-49 T 22-04-2016 RPIC12D_RS21840 523488331a10813c1bd33c43d89617ee 358 PRINTS PR00301 70kDa heat shock protein signature 37 47 8.2E-34 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS21840 523488331a10813c1bd33c43d89617ee 358 PRINTS PR00301 70kDa heat shock protein signature 297 313 8.2E-34 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS21840 523488331a10813c1bd33c43d89617ee 358 PRINTS PR00301 70kDa heat shock protein signature 216 235 8.2E-34 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS21840 523488331a10813c1bd33c43d89617ee 358 PRINTS PR00301 70kDa heat shock protein signature 159 175 8.2E-34 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS21840 523488331a10813c1bd33c43d89617ee 358 PRINTS PR00301 70kDa heat shock protein signature 190 210 8.2E-34 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS21840 523488331a10813c1bd33c43d89617ee 358 Gene3D G3DSA:2.60.34.10 196 357 1.5E-55 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RPIC12D_RS21840 523488331a10813c1bd33c43d89617ee 358 Gene3D G3DSA:3.30.420.40 144 187 8.6E-29 T 22-04-2016 RPIC12D_RS21840 523488331a10813c1bd33c43d89617ee 358 Gene3D G3DSA:3.30.420.40 37 64 8.6E-29 T 22-04-2016 RPIC12D_RS21840 523488331a10813c1bd33c43d89617ee 358 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 162 176 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RPIC12D_RS09495 d60daab0750e00e5870a31d96db34355 431 PANTHER PTHR11780 20 428 4.7E-216 T 22-04-2016 RPIC12D_RS09495 d60daab0750e00e5870a31d96db34355 431 SUPERFAMILY SSF142984 246 329 7.32E-26 T 22-04-2016 RPIC12D_RS09495 d60daab0750e00e5870a31d96db34355 431 SUPERFAMILY SSF142019 18 244 2.88E-82 T 22-04-2016 RPIC12D_RS09495 d60daab0750e00e5870a31d96db34355 431 SUPERFAMILY SSF140490 331 428 3.53E-37 T 22-04-2016 RPIC12D_RS09495 d60daab0750e00e5870a31d96db34355 431 SMART SM00928 334 379 8.8E-25 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RPIC12D_RS09495 d60daab0750e00e5870a31d96db34355 431 Pfam PF10531 SLBB domain 248 296 2.4E-13 T 22-04-2016 IPR019554 Soluble ligand binding domain RPIC12D_RS09495 d60daab0750e00e5870a31d96db34355 431 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 347 358 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 RPIC12D_RS09495 d60daab0750e00e5870a31d96db34355 431 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 20 420 1.6E-193 T 22-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 RPIC12D_RS09495 d60daab0750e00e5870a31d96db34355 431 PANTHER PTHR11780:SF10 20 428 4.7E-216 T 22-04-2016 RPIC12D_RS09495 d60daab0750e00e5870a31d96db34355 431 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 338 419 4.5E-30 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RPIC12D_RS09495 d60daab0750e00e5870a31d96db34355 431 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 53 224 8.0E-46 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain RPIC12D_RS14745 bc90d8c65f9a6c52cffce58e2be9638d 276 SMART SM01382 125 253 1.8E-87 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14745 bc90d8c65f9a6c52cffce58e2be9638d 276 SUPERFAMILY SSF50249 3 126 1.37E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS14745 bc90d8c65f9a6c52cffce58e2be9638d 276 SMART SM01383 42 119 2.6E-40 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14745 bc90d8c65f9a6c52cffce58e2be9638d 276 Gene3D G3DSA:2.30.30.30 120 196 5.0E-32 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 RPIC12D_RS14745 bc90d8c65f9a6c52cffce58e2be9638d 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14745 bc90d8c65f9a6c52cffce58e2be9638d 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 9.7E-55 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14745 bc90d8c65f9a6c52cffce58e2be9638d 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.0E-30 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14745 bc90d8c65f9a6c52cffce58e2be9638d 276 SUPERFAMILY SSF50104 128 273 1.75E-59 T 22-04-2016 IPR008991 Translation protein SH3-like domain RPIC12D_RS14745 bc90d8c65f9a6c52cffce58e2be9638d 276 Gene3D G3DSA:4.10.950.10 197 274 3.9E-35 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 RPIC12D_RS14745 bc90d8c65f9a6c52cffce58e2be9638d 276 PIRSF PIRSF002158 12 276 5.1E-96 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14745 bc90d8c65f9a6c52cffce58e2be9638d 276 PANTHER PTHR13691 1 276 1.9E-134 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14745 bc90d8c65f9a6c52cffce58e2be9638d 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 45.38 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RPIC12D_RS14745 bc90d8c65f9a6c52cffce58e2be9638d 276 PANTHER PTHR13691:SF5 1 276 1.9E-134 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RPIC12D_RS14745 bc90d8c65f9a6c52cffce58e2be9638d 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 274 1.2E-123 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RPIC12D_RS14745 bc90d8c65f9a6c52cffce58e2be9638d 276 Gene3D G3DSA:2.40.50.140 1 115 3.7E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS09705 d716ee9ccf2f0173ae141642224a7f05 190 Pfam PF01169 Uncharacterized protein family UPF0016 107 181 1.2E-22 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 RPIC12D_RS09705 d716ee9ccf2f0173ae141642224a7f05 190 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.0E-18 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 RPIC12D_RS09705 d716ee9ccf2f0173ae141642224a7f05 190 PANTHER PTHR12608 1 186 3.2E-32 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 RPIC12D_RS12910 a38eb611c55fa3f5d6f923b2c31526ef 332 PANTHER PTHR10836 1 332 4.0E-227 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RPIC12D_RS12910 a38eb611c55fa3f5d6f923b2c31526ef 332 SUPERFAMILY SSF51735 3 167 1.77E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS12910 a38eb611c55fa3f5d6f923b2c31526ef 332 PANTHER PTHR10836:SF31 1 332 4.0E-227 T 22-04-2016 RPIC12D_RS12910 a38eb611c55fa3f5d6f923b2c31526ef 332 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 RPIC12D_RS12910 a38eb611c55fa3f5d6f923b2c31526ef 332 SMART SM00846 3 151 2.7E-100 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 RPIC12D_RS12910 a38eb611c55fa3f5d6f923b2c31526ef 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 1.9E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RPIC12D_RS12910 a38eb611c55fa3f5d6f923b2c31526ef 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.9E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RPIC12D_RS12910 a38eb611c55fa3f5d6f923b2c31526ef 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 1.9E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RPIC12D_RS12910 a38eb611c55fa3f5d6f923b2c31526ef 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.9E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RPIC12D_RS12910 a38eb611c55fa3f5d6f923b2c31526ef 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 1.9E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RPIC12D_RS12910 a38eb611c55fa3f5d6f923b2c31526ef 332 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 313 9.3E-66 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 RPIC12D_RS12910 a38eb611c55fa3f5d6f923b2c31526ef 332 SUPERFAMILY SSF55347 150 313 5.06E-73 T 22-04-2016 RPIC12D_RS12910 a38eb611c55fa3f5d6f923b2c31526ef 332 Gene3D G3DSA:3.40.50.720 2 159 6.5E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS12910 a38eb611c55fa3f5d6f923b2c31526ef 332 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 151 4.5E-62 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 RPIC12D_RS12910 a38eb611c55fa3f5d6f923b2c31526ef 332 Gene3D G3DSA:3.30.360.10 160 315 1.8E-80 T 22-04-2016 RPIC12D_RS12910 a38eb611c55fa3f5d6f923b2c31526ef 332 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 3.1E-134 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS12910 a38eb611c55fa3f5d6f923b2c31526ef 332 PIRSF PIRSF000149 1 332 1.7E-130 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RPIC12D_RS22505 398aa4bae39682f4af0d348bc9c17d6a 166 SUPERFAMILY SSF75217 13 166 5.17E-22 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RPIC12D_RS22505 398aa4bae39682f4af0d348bc9c17d6a 166 Gene3D G3DSA:3.40.1280.10 11 166 3.6E-19 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIC12D_RS22505 398aa4bae39682f4af0d348bc9c17d6a 166 PANTHER PTHR12029 131 166 3.1E-15 T 22-04-2016 RPIC12D_RS22505 398aa4bae39682f4af0d348bc9c17d6a 166 PANTHER PTHR12029 23 115 3.1E-15 T 22-04-2016 RPIC12D_RS22505 398aa4bae39682f4af0d348bc9c17d6a 166 Pfam PF00588 SpoU rRNA Methylase family 21 166 1.4E-23 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RPIC12D_RS10895 7a6d5a8f326a4c722bea3be624923961 1002 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 472 492 1.7E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC12D_RS10895 7a6d5a8f326a4c722bea3be624923961 1002 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 321 336 1.7E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC12D_RS10895 7a6d5a8f326a4c722bea3be624923961 1002 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 205 218 1.7E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC12D_RS10895 7a6d5a8f326a4c722bea3be624923961 1002 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 640 660 1.7E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC12D_RS10895 7a6d5a8f326a4c722bea3be624923961 1002 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 682 711 1.7E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC12D_RS10895 7a6d5a8f326a4c722bea3be624923961 1002 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 257 273 1.7E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC12D_RS10895 7a6d5a8f326a4c722bea3be624923961 1002 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 821 847 1.7E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC12D_RS10895 7a6d5a8f326a4c722bea3be624923961 1002 Pfam PF00311 Phosphoenolpyruvate carboxylase 203 1002 9.1E-296 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC12D_RS10895 7a6d5a8f326a4c722bea3be624923961 1002 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 642 654 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC12D_RS10895 7a6d5a8f326a4c722bea3be624923961 1002 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 206 217 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC12D_RS10895 7a6d5a8f326a4c722bea3be624923961 1002 Gene3D G3DSA:1.20.1440.90 350 475 7.9E-28 T 22-04-2016 RPIC12D_RS10895 7a6d5a8f326a4c722bea3be624923961 1002 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 68 1002 19.517 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC12D_RS10895 7a6d5a8f326a4c722bea3be624923961 1002 PANTHER PTHR30523 66 1002 0.0 T 22-04-2016 RPIC12D_RS10895 7a6d5a8f326a4c722bea3be624923961 1002 SUPERFAMILY SSF51621 77 1002 2.67E-303 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS10895 7a6d5a8f326a4c722bea3be624923961 1002 PANTHER PTHR30523:SF0 66 1002 0.0 T 22-04-2016 RPIC12D_RS05065 ca5e5099b8c991fcd1c9930b7c205c5d 251 PANTHER PTHR11751 19 118 2.7E-28 T 22-04-2016 RPIC12D_RS05065 ca5e5099b8c991fcd1c9930b7c205c5d 251 Gene3D G3DSA:1.10.10.10 13 87 1.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS05065 ca5e5099b8c991fcd1c9930b7c205c5d 251 SUPERFAMILY SSF48008 99 238 8.63E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC12D_RS05065 ca5e5099b8c991fcd1c9930b7c205c5d 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 4.3E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS05065 ca5e5099b8c991fcd1c9930b7c205c5d 251 Pfam PF07729 FCD domain 103 229 1.7E-25 T 22-04-2016 IPR011711 GntR, C-terminal RPIC12D_RS05065 ca5e5099b8c991fcd1c9930b7c205c5d 251 Gene3D G3DSA:1.20.120.530 96 240 1.9E-31 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC12D_RS05065 ca5e5099b8c991fcd1c9930b7c205c5d 251 SUPERFAMILY SSF46785 13 84 1.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS05065 ca5e5099b8c991fcd1c9930b7c205c5d 251 SMART SM00895 102 230 6.2E-24 T 22-04-2016 IPR011711 GntR, C-terminal RPIC12D_RS05065 ca5e5099b8c991fcd1c9930b7c205c5d 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 1.35E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS05065 ca5e5099b8c991fcd1c9930b7c205c5d 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 1.35E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS05065 ca5e5099b8c991fcd1c9930b7c205c5d 251 SMART SM00345 21 80 8.1E-23 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS16065 635acc3eec000dd2fe017f0900916b0c 183 PANTHER PTHR40202:SF1 5 180 7.4E-35 T 22-04-2016 RPIC12D_RS16065 635acc3eec000dd2fe017f0900916b0c 183 SMART SM00471 23 126 0.0018 T 22-04-2016 IPR003607 HD/PDEase domain RPIC12D_RS16065 635acc3eec000dd2fe017f0900916b0c 183 Pfam PF01966 HD domain 28 100 1.1E-4 T 22-04-2016 IPR006674 HD domain RPIC12D_RS16065 635acc3eec000dd2fe017f0900916b0c 183 PANTHER PTHR40202 5 180 7.4E-35 T 22-04-2016 RPIC12D_RS16065 635acc3eec000dd2fe017f0900916b0c 183 Gene3D G3DSA:1.10.3210.10 29 103 8.5E-4 T 22-04-2016 IPR006674 HD domain RPIC12D_RS16065 635acc3eec000dd2fe017f0900916b0c 183 TIGRFAM TIGR03276 Phn-HD: phosphonate degradation operons associated HDIG domain protein 3 180 7.1E-74 T 22-04-2016 IPR017670 Phosphonate degradation operon associated HDIG domain protein RPIC12D_RS16065 635acc3eec000dd2fe017f0900916b0c 183 SUPERFAMILY SSF109604 8 69 8.05E-10 T 22-04-2016 RPIC12D_RS06820 0aeaef28b1d3742c795eb93ab42807bc 291 PANTHER PTHR10804:SF92 12 171 5.1E-53 T 22-04-2016 RPIC12D_RS06820 0aeaef28b1d3742c795eb93ab42807bc 291 PANTHER PTHR10804 12 171 5.1E-53 T 22-04-2016 RPIC12D_RS06820 0aeaef28b1d3742c795eb93ab42807bc 291 Pfam PF00557 Metallopeptidase family M24 17 264 3.7E-23 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC12D_RS06820 0aeaef28b1d3742c795eb93ab42807bc 291 Gene3D G3DSA:3.90.230.10 12 270 2.0E-26 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC12D_RS06820 0aeaef28b1d3742c795eb93ab42807bc 291 SUPERFAMILY SSF55920 12 174 3.34E-22 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC12D_RS06820 0aeaef28b1d3742c795eb93ab42807bc 291 SUPERFAMILY SSF55920 209 270 3.34E-22 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC12D_RS08160 9bd78f2337f9ede13320c374bbc6f716 704 Gene3D G3DSA:3.40.390.10 377 520 4.5E-57 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RPIC12D_RS08160 9bd78f2337f9ede13320c374bbc6f716 704 PANTHER PTHR11804 1 704 4.8E-276 T 22-04-2016 RPIC12D_RS08160 9bd78f2337f9ede13320c374bbc6f716 704 PANTHER PTHR11804:SF8 1 704 4.8E-276 T 22-04-2016 RPIC12D_RS08160 9bd78f2337f9ede13320c374bbc6f716 704 Pfam PF01432 Peptidase family M3 235 696 2.9E-143 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 RPIC12D_RS08160 9bd78f2337f9ede13320c374bbc6f716 704 Gene3D G3DSA:1.10.1370.10 152 366 1.6E-135 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RPIC12D_RS08160 9bd78f2337f9ede13320c374bbc6f716 704 Gene3D G3DSA:1.10.1370.10 521 700 1.6E-135 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RPIC12D_RS08160 9bd78f2337f9ede13320c374bbc6f716 704 Gene3D G3DSA:1.20.1050.40 22 149 9.8E-20 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal RPIC12D_RS08160 9bd78f2337f9ede13320c374bbc6f716 704 SUPERFAMILY SSF55486 13 698 6.38E-195 T 22-04-2016 RPIC12D_RS06485 7b24c841b6768c986cea81e9f673572d 575 PANTHER PTHR18968 1 574 1.5E-242 T 22-04-2016 RPIC12D_RS06485 7b24c841b6768c986cea81e9f673572d 575 Gene3D G3DSA:3.40.50.970 15 189 9.4E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS06485 7b24c841b6768c986cea81e9f673572d 575 SUPERFAMILY SSF52518 380 562 2.03E-57 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS06485 7b24c841b6768c986cea81e9f673572d 575 SUPERFAMILY SSF52518 16 191 9.68E-55 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS06485 7b24c841b6768c986cea81e9f673572d 575 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 443 462 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 RPIC12D_RS06485 7b24c841b6768c986cea81e9f673572d 575 PANTHER PTHR18968:SF120 1 574 1.5E-242 T 22-04-2016 RPIC12D_RS06485 7b24c841b6768c986cea81e9f673572d 575 Gene3D G3DSA:3.40.50.1220 202 348 9.4E-37 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC12D_RS06485 7b24c841b6768c986cea81e9f673572d 575 Gene3D G3DSA:3.40.50.970 374 561 2.4E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS06485 7b24c841b6768c986cea81e9f673572d 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 209 345 4.0E-27 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RPIC12D_RS06485 7b24c841b6768c986cea81e9f673572d 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 403 553 4.1E-41 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RPIC12D_RS06485 7b24c841b6768c986cea81e9f673572d 575 SUPERFAMILY SSF52467 169 370 3.27E-38 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC12D_RS06485 7b24c841b6768c986cea81e9f673572d 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 17 183 1.4E-54 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RPIC12D_RS08950 f34fe5b51e5b0a9279a581b60dc9ad9d 308 PANTHER PTHR12715:SF11 1 287 3.4E-53 T 22-04-2016 RPIC12D_RS08950 f34fe5b51e5b0a9279a581b60dc9ad9d 308 SUPERFAMILY SSF103481 26 126 5.62E-17 T 22-04-2016 RPIC12D_RS08950 f34fe5b51e5b0a9279a581b60dc9ad9d 308 SUPERFAMILY SSF103481 180 285 1.7E-14 T 22-04-2016 RPIC12D_RS08950 f34fe5b51e5b0a9279a581b60dc9ad9d 308 Pfam PF00892 EamA-like transporter family 144 280 3.0E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS08950 f34fe5b51e5b0a9279a581b60dc9ad9d 308 Pfam PF00892 EamA-like transporter family 4 124 5.2E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS08950 f34fe5b51e5b0a9279a581b60dc9ad9d 308 PANTHER PTHR12715 1 287 3.4E-53 T 22-04-2016 RPIC12D_RS14345 f769c04b65ef4ac36d2223ae7cb8c2da 368 Gene3D G3DSA:3.40.190.10 149 288 7.1E-59 T 22-04-2016 RPIC12D_RS14345 f769c04b65ef4ac36d2223ae7cb8c2da 368 SUPERFAMILY SSF53850 51 348 3.31E-58 T 22-04-2016 RPIC12D_RS14345 f769c04b65ef4ac36d2223ae7cb8c2da 368 Pfam PF13416 Bacterial extracellular solute-binding protein 66 321 3.5E-22 T 22-04-2016 RPIC12D_RS14345 f769c04b65ef4ac36d2223ae7cb8c2da 368 Gene3D G3DSA:3.40.190.10 289 363 9.0E-60 T 22-04-2016 RPIC12D_RS14345 f769c04b65ef4ac36d2223ae7cb8c2da 368 Gene3D G3DSA:3.40.190.10 22 148 9.0E-60 T 22-04-2016 RPIC12D_RS14345 f769c04b65ef4ac36d2223ae7cb8c2da 368 PANTHER PTHR30006 13 368 2.8E-94 T 22-04-2016 RPIC12D_RS14345 f769c04b65ef4ac36d2223ae7cb8c2da 368 PANTHER PTHR30006:SF10 13 368 2.8E-94 T 22-04-2016 RPIC12D_RS04400 c1069356d6b279b3b9125e4c67936259 315 Pfam PF03193 Protein of unknown function, DUF258 72 248 1.1E-48 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 RPIC12D_RS04400 c1069356d6b279b3b9125e4c67936259 315 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 52 306 1.3E-63 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 RPIC12D_RS04400 c1069356d6b279b3b9125e4c67936259 315 Gene3D G3DSA:3.40.50.300 86 248 1.6E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04400 c1069356d6b279b3b9125e4c67936259 315 SUPERFAMILY SSF50249 18 74 5.14E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04400 c1069356d6b279b3b9125e4c67936259 315 PANTHER PTHR32120:SF2 19 314 9.0E-95 T 22-04-2016 RPIC12D_RS04400 c1069356d6b279b3b9125e4c67936259 315 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 17 313 35.021 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 RPIC12D_RS04400 c1069356d6b279b3b9125e4c67936259 315 SUPERFAMILY SSF52540 87 313 2.93E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04400 c1069356d6b279b3b9125e4c67936259 315 Gene3D G3DSA:2.40.50.140 18 71 1.6E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04400 c1069356d6b279b3b9125e4c67936259 315 PANTHER PTHR32120 19 314 9.0E-95 T 22-04-2016 RPIC12D_RS04400 c1069356d6b279b3b9125e4c67936259 315 Gene3D G3DSA:1.10.40.50 250 314 2.2E-22 T 22-04-2016 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 SUPERFAMILY SSF54292 9 97 1.01E-25 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 SUPERFAMILY SSF63380 77 203 7.58E-26 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 SUPERFAMILY SSF52343 201 333 1.44E-35 T 22-04-2016 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 PANTHER PTHR19370 35 331 1.9E-56 T 22-04-2016 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 PANTHER PTHR19370:SF128 35 331 1.9E-56 T 22-04-2016 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 153 160 2.2E-27 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 235 244 2.2E-27 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 195 204 2.2E-27 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 299 307 2.2E-27 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 210 229 2.2E-27 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 148 2.2E-27 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 Pfam PF00175 Oxidoreductase NAD-binding domain 211 314 2.9E-19 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 Gene3D G3DSA:2.40.30.10 107 197 4.5E-24 T 22-04-2016 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 235 244 8.2E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 210 229 8.2E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 299 307 8.2E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 153 160 8.2E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 Gene3D G3DSA:3.40.50.80 204 333 9.2E-36 T 22-04-2016 RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 Gene3D G3DSA:3.10.20.30 3 97 5.8E-27 T 22-04-2016 IPR012675 Beta-grasp domain RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 Pfam PF00970 Oxidoreductase FAD-binding domain 118 201 4.7E-15 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RPIC12D_RS07170 bcd55dcfeb0ae1ac78f85aea1ba32797 342 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 86 9.9E-15 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS03325 97c83b723d32b12c75c4b892cd122bdb 760 SUPERFAMILY SSF52540 572 737 1.15E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03325 97c83b723d32b12c75c4b892cd122bdb 760 SUPERFAMILY SSF52540 352 394 1.15E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03325 97c83b723d32b12c75c4b892cd122bdb 760 PANTHER PTHR10799:SF573 69 195 2.9E-17 T 22-04-2016 RPIC12D_RS03325 97c83b723d32b12c75c4b892cd122bdb 760 PANTHER PTHR10799:SF573 348 426 2.9E-17 T 22-04-2016 RPIC12D_RS03325 97c83b723d32b12c75c4b892cd122bdb 760 PANTHER PTHR10799:SF573 471 703 2.9E-17 T 22-04-2016 RPIC12D_RS03325 97c83b723d32b12c75c4b892cd122bdb 760 Pfam PF00271 Helicase conserved C-terminal domain 585 696 1.2E-6 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS03325 97c83b723d32b12c75c4b892cd122bdb 760 SUPERFAMILY SSF52540 346 412 6.39E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03325 97c83b723d32b12c75c4b892cd122bdb 760 PANTHER PTHR10799 69 195 2.9E-17 T 22-04-2016 RPIC12D_RS03325 97c83b723d32b12c75c4b892cd122bdb 760 PANTHER PTHR10799 348 426 2.9E-17 T 22-04-2016 RPIC12D_RS03325 97c83b723d32b12c75c4b892cd122bdb 760 PANTHER PTHR10799 471 703 2.9E-17 T 22-04-2016 RPIC12D_RS03325 97c83b723d32b12c75c4b892cd122bdb 760 Gene3D G3DSA:3.40.50.300 346 404 2.2E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03325 97c83b723d32b12c75c4b892cd122bdb 760 Gene3D G3DSA:3.40.50.300 65 177 2.2E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03325 97c83b723d32b12c75c4b892cd122bdb 760 Pfam PF04851 Type III restriction enzyme, res subunit 73 146 3.5E-5 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RPIC12D_RS03325 97c83b723d32b12c75c4b892cd122bdb 760 Gene3D G3DSA:3.40.50.300 580 705 3.0E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03325 97c83b723d32b12c75c4b892cd122bdb 760 SUPERFAMILY SSF52540 70 180 6.39E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03325 97c83b723d32b12c75c4b892cd122bdb 760 SMART SM00487 70 414 2.9E-7 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC12D_RS02250 047b1afaa728badeaaae8490013f00fa 576 Pfam PF00474 Sodium:solute symporter family 68 493 3.5E-113 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC12D_RS02250 047b1afaa728badeaaae8490013f00fa 576 PANTHER PTHR11819 37 565 2.7E-249 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC12D_RS02250 047b1afaa728badeaaae8490013f00fa 576 PANTHER PTHR11819:SF13 37 565 2.7E-249 T 22-04-2016 RPIC12D_RS02250 047b1afaa728badeaaae8490013f00fa 576 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 68 493 3.4E-62 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC12D_RS02250 047b1afaa728badeaaae8490013f00fa 576 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 183 208 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS04560 d61722feade6007be3de04b2cd7ee3b7 428 SUPERFAMILY SSF55785 294 418 1.5E-9 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS04560 d61722feade6007be3de04b2cd7ee3b7 428 Pfam PF05231 MASE1 13 296 8.7E-47 T 22-04-2016 IPR007895 MASE1 RPIC12D_RS04560 d61722feade6007be3de04b2cd7ee3b7 428 Gene3D G3DSA:3.30.450.20 287 422 2.4E-12 T 22-04-2016 RPIC12D_RS04560 d61722feade6007be3de04b2cd7ee3b7 428 Pfam PF08447 PAS fold 331 421 1.0E-6 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 RPIC12D_RS11430 a03712ada74aa26889dbbefaa4f1b16c 149 Gene3D G3DSA:3.90.75.10 30 76 1.5E-5 T 22-04-2016 RPIC12D_RS11430 a03712ada74aa26889dbbefaa4f1b16c 149 Pfam PF13392 HNH endonuclease 29 76 1.3E-10 T 22-04-2016 IPR003615 HNH nuclease RPIC12D_RS11430 a03712ada74aa26889dbbefaa4f1b16c 149 SUPERFAMILY SSF54060 14 133 6.47E-18 T 22-04-2016 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 Gene3D G3DSA:3.50.50.60 2 116 1.7E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 PANTHER PTHR22912 1 318 5.5E-153 T 22-04-2016 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 Gene3D G3DSA:3.50.50.60 234 315 7.6E-12 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 PANTHER PTHR22912:SF48 1 318 5.5E-153 T 22-04-2016 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 SUPERFAMILY SSF51905 1 314 2.51E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 302 5.9E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 4.4E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 4.4E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 4.4E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 4.4E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 4.4E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 4.4E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 197 213 4.4E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 4.4E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 4.4E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.6E-39 T 22-04-2016 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.6E-39 T 22-04-2016 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 1.6E-39 T 22-04-2016 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.6E-39 T 22-04-2016 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 1.6E-39 T 22-04-2016 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 6 314 1.8E-118 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 RPIC12D_RS10820 ffe45c2bdbcde071189282ec8f19eb9d 318 Gene3D G3DSA:3.50.50.60 117 233 2.5E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS08725 23695219fe6c603f2cb9e5caa7d89a37 262 SUPERFAMILY SSF53335 73 212 1.06E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS08725 23695219fe6c603f2cb9e5caa7d89a37 262 Pfam PF08241 Methyltransferase domain 72 120 2.9E-10 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RPIC12D_RS08725 23695219fe6c603f2cb9e5caa7d89a37 262 PANTHER PTHR10108 78 168 2.2E-22 T 22-04-2016 RPIC12D_RS08725 23695219fe6c603f2cb9e5caa7d89a37 262 Gene3D G3DSA:3.40.50.150 76 213 1.6E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS08725 23695219fe6c603f2cb9e5caa7d89a37 262 PANTHER PTHR10108:SF836 78 168 2.2E-22 T 22-04-2016 RPIC12D_RS01745 5c744faac4f86e13edc175b8b4a2417e 525 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 442 6.6E-171 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 RPIC12D_RS01745 5c744faac4f86e13edc175b8b4a2417e 525 PANTHER PTHR10566 6 457 2.3E-228 T 22-04-2016 RPIC12D_RS01745 5c744faac4f86e13edc175b8b4a2417e 525 PANTHER PTHR10566:SF79 6 457 2.3E-228 T 22-04-2016 RPIC12D_RS01745 5c744faac4f86e13edc175b8b4a2417e 525 Pfam PF03109 ABC1 family 108 229 2.1E-32 T 22-04-2016 IPR004147 UbiB domain RPIC12D_RS01745 5c744faac4f86e13edc175b8b4a2417e 525 Gene3D G3DSA:3.90.1200.10 245 317 6.5E-6 T 22-04-2016 RPIC12D_RS01745 5c744faac4f86e13edc175b8b4a2417e 525 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 525 51.979 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 RPIC12D_RS01745 5c744faac4f86e13edc175b8b4a2417e 525 SUPERFAMILY SSF56112 192 435 4.25E-43 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC12D_RS01745 5c744faac4f86e13edc175b8b4a2417e 525 SUPERFAMILY SSF56112 90 157 4.25E-43 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC12D_RS09180 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 Gene3D G3DSA:3.10.20.30 2 102 8.9E-38 T 22-04-2016 IPR012675 Beta-grasp domain RPIC12D_RS09180 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 Gene3D G3DSA:1.10.1060.10 103 231 2.8E-48 T 22-04-2016 RPIC12D_RS09180 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 225 6.4E-86 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RPIC12D_RS09180 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 SUPERFAMILY SSF46548 103 230 2.96E-39 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIC12D_RS09180 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 Pfam PF13534 4Fe-4S dicluster domain 143 216 2.5E-9 T 22-04-2016 RPIC12D_RS09180 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 SUPERFAMILY SSF54292 2 102 2.71E-28 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS09180 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC12D_RS09180 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 PANTHER PTHR11921:SF29 3 231 8.9E-133 T 22-04-2016 RPIC12D_RS09180 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 PANTHER PTHR11921 3 231 8.9E-133 T 22-04-2016 RPIC12D_RS09180 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 108 5.0E-33 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RPIC12D_RS05985 5209a87ed8981a05e94060b835d73cfe 954 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 13 943 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RPIC12D_RS05985 5209a87ed8981a05e94060b835d73cfe 954 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 802 944 5.6E-54 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RPIC12D_RS05985 5209a87ed8981a05e94060b835d73cfe 954 SUPERFAMILY SSF52518 125 552 4.0E-88 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS05985 5209a87ed8981a05e94060b835d73cfe 954 Pfam PF00676 Dehydrogenase E1 component 217 521 1.2E-46 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 RPIC12D_RS05985 5209a87ed8981a05e94060b835d73cfe 954 Gene3D G3DSA:3.40.50.970 167 523 8.0E-70 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS05985 5209a87ed8981a05e94060b835d73cfe 954 PANTHER PTHR23152:SF4 3 953 0.0 T 22-04-2016 RPIC12D_RS05985 5209a87ed8981a05e94060b835d73cfe 954 Gene3D G3DSA:3.40.50.970 607 805 8.9E-23 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS05985 5209a87ed8981a05e94060b835d73cfe 954 PIRSF PIRSF000157 1 946 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RPIC12D_RS05985 5209a87ed8981a05e94060b835d73cfe 954 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 11 49 4.9E-16 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RPIC12D_RS05985 5209a87ed8981a05e94060b835d73cfe 954 Pfam PF02779 Transketolase, pyrimidine binding domain 600 796 3.9E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RPIC12D_RS05985 5209a87ed8981a05e94060b835d73cfe 954 SMART SM00861 600 797 1.5E-62 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RPIC12D_RS05985 5209a87ed8981a05e94060b835d73cfe 954 SUPERFAMILY SSF52518 583 804 2.55E-50 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS05985 5209a87ed8981a05e94060b835d73cfe 954 PANTHER PTHR23152 3 953 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RPIC12D_RS08865 60201f2713296ee47ec222834995365a 327 PANTHER PTHR30465:SF0 1 320 2.0E-104 T 22-04-2016 RPIC12D_RS08865 60201f2713296ee47ec222834995365a 327 Gene3D G3DSA:1.10.3720.10 88 316 5.1E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS08865 60201f2713296ee47ec222834995365a 327 PANTHER PTHR30465 1 320 2.0E-104 T 22-04-2016 RPIC12D_RS08865 60201f2713296ee47ec222834995365a 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 319 2.0E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS08865 60201f2713296ee47ec222834995365a 327 SUPERFAMILY SSF161098 89 305 3.82E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS14290 d4c58fdab658e61e8b3e11f6d9ebb820 247 PRINTS PR00603 Cytochrome C1 signature 212 227 4.4E-14 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RPIC12D_RS14290 d4c58fdab658e61e8b3e11f6d9ebb820 247 PRINTS PR00603 Cytochrome C1 signature 193 212 4.4E-14 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RPIC12D_RS14290 d4c58fdab658e61e8b3e11f6d9ebb820 247 PRINTS PR00603 Cytochrome C1 signature 45 64 4.4E-14 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RPIC12D_RS14290 d4c58fdab658e61e8b3e11f6d9ebb820 247 PRINTS PR00603 Cytochrome C1 signature 106 130 4.4E-14 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RPIC12D_RS14290 d4c58fdab658e61e8b3e11f6d9ebb820 247 PANTHER PTHR10266:SF3 190 247 5.0E-48 T 22-04-2016 RPIC12D_RS14290 d4c58fdab658e61e8b3e11f6d9ebb820 247 PANTHER PTHR10266:SF3 7 163 5.0E-48 T 22-04-2016 RPIC12D_RS14290 d4c58fdab658e61e8b3e11f6d9ebb820 247 Pfam PF02167 Cytochrome C1 family 34 245 1.1E-20 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RPIC12D_RS14290 d4c58fdab658e61e8b3e11f6d9ebb820 247 Gene3D G3DSA:1.20.5.100 217 247 5.6E-5 T 22-04-2016 RPIC12D_RS14290 d4c58fdab658e61e8b3e11f6d9ebb820 247 Gene3D G3DSA:1.10.760.10 21 212 2.7E-68 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS14290 d4c58fdab658e61e8b3e11f6d9ebb820 247 PANTHER PTHR10266 190 247 5.0E-48 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RPIC12D_RS14290 d4c58fdab658e61e8b3e11f6d9ebb820 247 PANTHER PTHR10266 7 163 5.0E-48 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RPIC12D_RS14290 d4c58fdab658e61e8b3e11f6d9ebb820 247 SUPERFAMILY SSF46626 19 161 2.82E-55 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS14290 d4c58fdab658e61e8b3e11f6d9ebb820 247 SUPERFAMILY SSF46626 188 211 2.82E-55 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS06415 a64f17581c3e69d5812208d011f94ab4 343 SUPERFAMILY SSF53850 47 278 2.47E-48 T 22-04-2016 RPIC12D_RS06415 a64f17581c3e69d5812208d011f94ab4 343 Gene3D G3DSA:3.40.190.10 144 252 1.5E-27 T 22-04-2016 RPIC12D_RS06415 a64f17581c3e69d5812208d011f94ab4 343 Gene3D G3DSA:3.40.190.10 50 143 3.9E-6 T 22-04-2016 RPIC12D_RS06415 a64f17581c3e69d5812208d011f94ab4 343 SMART SM00062 50 269 2.5E-20 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS06415 a64f17581c3e69d5812208d011f94ab4 343 PANTHER PTHR30024 11 331 1.1E-116 T 22-04-2016 RPIC12D_RS06415 a64f17581c3e69d5812208d011f94ab4 343 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 51 329 1.1E-72 T 22-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 RPIC12D_RS06415 a64f17581c3e69d5812208d011f94ab4 343 PANTHER PTHR30024:SF11 11 331 1.1E-116 T 22-04-2016 RPIC12D_RS06415 a64f17581c3e69d5812208d011f94ab4 343 Pfam PF13379 NMT1-like family 47 274 4.5E-14 T 22-04-2016 RPIC12D_RS00625 2e9f2a9ec4964c2f83446465c77b0ddf 311 SUPERFAMILY SSF53474 50 277 2.18E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS00625 2e9f2a9ec4964c2f83446465c77b0ddf 311 Pfam PF00326 Prolyl oligopeptidase family 87 169 5.7E-12 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RPIC12D_RS00625 2e9f2a9ec4964c2f83446465c77b0ddf 311 Gene3D G3DSA:3.40.50.1820 34 251 9.5E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS00625 2e9f2a9ec4964c2f83446465c77b0ddf 311 PANTHER PTHR11731 38 175 6.8E-12 T 22-04-2016 RPIC12D_RS05495 88483afc168a3acd8b5389ccdc483e9e 270 Pfam PF00459 Inositol monophosphatase family 2 252 3.6E-67 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RPIC12D_RS05495 88483afc168a3acd8b5389ccdc483e9e 270 Gene3D G3DSA:3.40.190.80 155 262 4.9E-33 T 22-04-2016 RPIC12D_RS05495 88483afc168a3acd8b5389ccdc483e9e 270 PANTHER PTHR20854 1 269 4.2E-96 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RPIC12D_RS05495 88483afc168a3acd8b5389ccdc483e9e 270 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 214 228 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 RPIC12D_RS05495 88483afc168a3acd8b5389ccdc483e9e 270 Gene3D G3DSA:3.30.540.10 2 154 2.5E-56 T 22-04-2016 RPIC12D_RS05495 88483afc168a3acd8b5389ccdc483e9e 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 1.7E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RPIC12D_RS05495 88483afc168a3acd8b5389ccdc483e9e 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 1.7E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RPIC12D_RS05495 88483afc168a3acd8b5389ccdc483e9e 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.7E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RPIC12D_RS05495 88483afc168a3acd8b5389ccdc483e9e 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 180 201 1.7E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RPIC12D_RS05495 88483afc168a3acd8b5389ccdc483e9e 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 1.7E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RPIC12D_RS05495 88483afc168a3acd8b5389ccdc483e9e 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.7E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RPIC12D_RS05495 88483afc168a3acd8b5389ccdc483e9e 270 PANTHER PTHR20854:SF4 1 269 4.2E-96 T 22-04-2016 RPIC12D_RS05495 88483afc168a3acd8b5389ccdc483e9e 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.1E-26 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RPIC12D_RS05495 88483afc168a3acd8b5389ccdc483e9e 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 107 126 1.1E-26 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RPIC12D_RS05495 88483afc168a3acd8b5389ccdc483e9e 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 201 213 1.1E-26 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RPIC12D_RS05495 88483afc168a3acd8b5389ccdc483e9e 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 159 185 1.1E-26 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RPIC12D_RS05495 88483afc168a3acd8b5389ccdc483e9e 270 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site RPIC12D_RS05495 88483afc168a3acd8b5389ccdc483e9e 270 SUPERFAMILY SSF56655 1 259 4.32E-82 T 22-04-2016 RPIC12D_RS09400 4703583ad6157d10ce154417cd5368cb 283 PANTHER PTHR24220:SF366 37 283 3.7E-111 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD RPIC12D_RS09400 4703583ad6157d10ce154417cd5368cb 283 ProSitePatterns PS00211 ABC transporters family signature. 182 196 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS09400 4703583ad6157d10ce154417cd5368cb 283 PANTHER PTHR24220 37 283 3.7E-111 T 22-04-2016 RPIC12D_RS09400 4703583ad6157d10ce154417cd5368cb 283 Pfam PF00005 ABC transporter 51 210 2.3E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS09400 4703583ad6157d10ce154417cd5368cb 283 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 35 283 1.1E-105 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD RPIC12D_RS09400 4703583ad6157d10ce154417cd5368cb 283 Gene3D G3DSA:3.40.50.300 34 278 9.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09400 4703583ad6157d10ce154417cd5368cb 283 SUPERFAMILY SSF52540 35 280 8.61E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09400 4703583ad6157d10ce154417cd5368cb 283 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 261 282 2.8E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RPIC12D_RS10880 5d2dd9035199a9ee7e8fbdfe1244efe7 397 Gene3D G3DSA:1.25.40.10 85 391 5.3E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS10880 5d2dd9035199a9ee7e8fbdfe1244efe7 397 SUPERFAMILY SSF48452 259 391 4.93E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS10880 5d2dd9035199a9ee7e8fbdfe1244efe7 397 Pfam PF07219 HemY protein N-terminus 27 131 2.7E-25 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 RPIC12D_RS10880 5d2dd9035199a9ee7e8fbdfe1244efe7 397 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 391 6.8E-132 T 22-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 RPIC12D_RS12470 f7ec5d7135c46f95adca8f582896bf89 487 PANTHER PTHR30624 22 486 1.3E-217 T 22-04-2016 RPIC12D_RS12470 f7ec5d7135c46f95adca8f582896bf89 487 PIRSF PIRSF004919 23 487 3.9E-138 T 22-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC12D_RS12470 f7ec5d7135c46f95adca8f582896bf89 487 Pfam PF01523 Putative modulator of DNA gyrase 43 338 2.2E-65 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC12D_RS12470 f7ec5d7135c46f95adca8f582896bf89 487 SUPERFAMILY SSF111283 27 486 3.53E-132 T 22-04-2016 RPIC12D_RS12470 f7ec5d7135c46f95adca8f582896bf89 487 PANTHER PTHR30624:SF4 22 486 1.3E-217 T 22-04-2016 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 Gene3D G3DSA:3.30.930.10 10 234 1.3E-106 T 22-04-2016 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 Gene3D G3DSA:3.30.930.10 391 473 1.3E-106 T 22-04-2016 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 569 4.4E-230 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 SUPERFAMILY SSF55826 218 392 5.62E-36 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 461 7.1E-49 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 SUPERFAMILY SSF55681 409 480 2.03E-106 T 22-04-2016 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 SUPERFAMILY SSF55681 10 237 2.03E-106 T 22-04-2016 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 PIRSF PIRSF001535 1 574 8.3E-271 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.1E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.1E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.1E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.1E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 PANTHER PTHR11451:SF3 4 244 1.6E-149 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 PANTHER PTHR11451:SF3 401 574 1.6E-149 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 SUPERFAMILY SSF52954 466 573 1.66E-30 T 22-04-2016 IPR004154 Anticodon-binding RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 Pfam PF03129 Anticodon binding domain 477 570 2.4E-18 T 22-04-2016 IPR004154 Anticodon-binding RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 Gene3D G3DSA:3.40.50.800 474 573 1.7E-29 T 22-04-2016 IPR004154 Anticodon-binding RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 Pfam PF04073 Aminoacyl-tRNA editing domain 257 381 7.6E-29 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 573 41.355 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 Gene3D G3DSA:3.90.960.10 253 390 5.5E-31 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 PANTHER PTHR11451 4 244 1.6E-149 T 22-04-2016 RPIC12D_RS13275 1750e26bcbfb51adaf4a9deaa24d7c06 574 PANTHER PTHR11451 401 574 1.6E-149 T 22-04-2016 RPIC12D_RS01930 aee13ffb5d454b27b11ca51581280682 170 PANTHER PTHR10472 2 149 4.5E-64 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RPIC12D_RS01930 aee13ffb5d454b27b11ca51581280682 170 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 150 5.8E-53 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RPIC12D_RS01930 aee13ffb5d454b27b11ca51581280682 170 SUPERFAMILY SSF69500 4 149 5.1E-51 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain RPIC12D_RS01930 aee13ffb5d454b27b11ca51581280682 170 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 4 148 1.9E-49 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RPIC12D_RS01930 aee13ffb5d454b27b11ca51581280682 170 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 150 33.595 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RPIC12D_RS01930 aee13ffb5d454b27b11ca51581280682 170 Gene3D G3DSA:3.50.80.10 4 149 8.0E-52 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain RPIC12D_RS08820 9417a3e4e844c28604a8250b3ff907f1 242 Pfam PF00929 Exonuclease 4 165 3.9E-36 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIC12D_RS08820 9417a3e4e844c28604a8250b3ff907f1 242 Gene3D G3DSA:3.30.420.10 1 174 1.1E-65 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS08820 9417a3e4e844c28604a8250b3ff907f1 242 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 231 1.7E-88 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS08820 9417a3e4e844c28604a8250b3ff907f1 242 SUPERFAMILY SSF53098 1 175 1.52E-56 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS08820 9417a3e4e844c28604a8250b3ff907f1 242 SMART SM00479 2 174 8.7E-51 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIC12D_RS08820 9417a3e4e844c28604a8250b3ff907f1 242 PANTHER PTHR30231:SF0 1 237 3.2E-93 T 22-04-2016 RPIC12D_RS08820 9417a3e4e844c28604a8250b3ff907f1 242 PANTHER PTHR30231 1 237 3.2E-93 T 22-04-2016 RPIC12D_RS08820 9417a3e4e844c28604a8250b3ff907f1 242 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 210 3.7E-61 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS14490 2d3285ee2dee7b6d9dda27ba2abb94b1 1579 SUPERFAMILY SSF69336 1279 1566 4.84E-96 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS14490 2d3285ee2dee7b6d9dda27ba2abb94b1 1579 PANTHER PTHR11938:SF1 966 1495 0.0 T 22-04-2016 RPIC12D_RS14490 2d3285ee2dee7b6d9dda27ba2abb94b1 1579 Pfam PF00310 Glutamine amidotransferases class-II 34 457 2.0E-187 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain RPIC12D_RS14490 2d3285ee2dee7b6d9dda27ba2abb94b1 1579 Pfam PF01493 GXGXG motif 1311 1496 2.1E-82 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS14490 2d3285ee2dee7b6d9dda27ba2abb94b1 1579 Pfam PF04898 Glutamate synthase central domain 488 772 9.3E-111 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 RPIC12D_RS14490 2d3285ee2dee7b6d9dda27ba2abb94b1 1579 Pfam PF01645 Conserved region in glutamate synthase 833 1230 1.7E-157 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 RPIC12D_RS14490 2d3285ee2dee7b6d9dda27ba2abb94b1 1579 Gene3D G3DSA:3.60.20.10 34 468 1.6E-190 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS14490 2d3285ee2dee7b6d9dda27ba2abb94b1 1579 SUPERFAMILY SSF56235 34 459 7.13E-156 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS14490 2d3285ee2dee7b6d9dda27ba2abb94b1 1579 Gene3D G3DSA:2.160.20.60 1284 1573 2.7E-109 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS14490 2d3285ee2dee7b6d9dda27ba2abb94b1 1579 PANTHER PTHR11938:SF1 23 945 0.0 T 22-04-2016 RPIC12D_RS14490 2d3285ee2dee7b6d9dda27ba2abb94b1 1579 PANTHER PTHR11938:SF1 1516 1567 0.0 T 22-04-2016 RPIC12D_RS14490 2d3285ee2dee7b6d9dda27ba2abb94b1 1579 PANTHER PTHR11938 966 1495 0.0 T 22-04-2016 RPIC12D_RS14490 2d3285ee2dee7b6d9dda27ba2abb94b1 1579 SUPERFAMILY SSF51395 481 942 3.01E-266 T 22-04-2016 RPIC12D_RS14490 2d3285ee2dee7b6d9dda27ba2abb94b1 1579 SUPERFAMILY SSF51395 970 1265 3.01E-266 T 22-04-2016 RPIC12D_RS14490 2d3285ee2dee7b6d9dda27ba2abb94b1 1579 Gene3D G3DSA:3.20.20.70 872 1268 2.7E-183 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS14490 2d3285ee2dee7b6d9dda27ba2abb94b1 1579 Gene3D G3DSA:3.20.20.70 471 823 5.9E-110 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS14490 2d3285ee2dee7b6d9dda27ba2abb94b1 1579 PANTHER PTHR11938 23 945 0.0 T 22-04-2016 RPIC12D_RS14490 2d3285ee2dee7b6d9dda27ba2abb94b1 1579 PANTHER PTHR11938 1516 1567 0.0 T 22-04-2016 RPIC12D_RS16750 9102a0d604197ce56da827c385348e3a 229 PANTHER PTHR11260:SF144 7 197 4.6E-56 T 22-04-2016 RPIC12D_RS16750 9102a0d604197ce56da827c385348e3a 229 SUPERFAMILY SSF52833 7 90 2.11E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS16750 9102a0d604197ce56da827c385348e3a 229 Gene3D G3DSA:1.20.1050.10 96 206 2.9E-46 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS16750 9102a0d604197ce56da827c385348e3a 229 SUPERFAMILY SSF47616 81 200 1.85E-16 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS16750 9102a0d604197ce56da827c385348e3a 229 Gene3D G3DSA:3.40.30.10 9 95 1.1E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS16750 9102a0d604197ce56da827c385348e3a 229 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 78 4.7E-12 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC12D_RS16750 9102a0d604197ce56da827c385348e3a 229 PANTHER PTHR11260 7 197 4.6E-56 T 22-04-2016 RPIC12D_RS13695 e7b8234beea6830c9fb4bb643131f0e5 569 Pfam PF00501 AMP-binding enzyme 30 471 6.9E-107 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC12D_RS13695 e7b8234beea6830c9fb4bb643131f0e5 569 Pfam PF13193 AMP-binding enzyme C-terminal domain 480 554 6.5E-17 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC12D_RS13695 e7b8234beea6830c9fb4bb643131f0e5 569 ProSitePatterns PS00455 Putative AMP-binding domain signature. 210 221 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC12D_RS13695 e7b8234beea6830c9fb4bb643131f0e5 569 Gene3D G3DSA:2.30.38.10 390 462 1.9E-30 T 22-04-2016 RPIC12D_RS13695 e7b8234beea6830c9fb4bb643131f0e5 569 Gene3D G3DSA:3.40.50.980 215 389 1.4E-42 T 22-04-2016 RPIC12D_RS13695 e7b8234beea6830c9fb4bb643131f0e5 569 Gene3D G3DSA:3.40.50.980 184 214 2.7E-38 T 22-04-2016 RPIC12D_RS13695 e7b8234beea6830c9fb4bb643131f0e5 569 Gene3D G3DSA:3.40.50.980 24 151 2.7E-38 T 22-04-2016 RPIC12D_RS13695 e7b8234beea6830c9fb4bb643131f0e5 569 Gene3D G3DSA:3.30.300.30 468 567 2.0E-28 T 22-04-2016 RPIC12D_RS13695 e7b8234beea6830c9fb4bb643131f0e5 569 SUPERFAMILY SSF56801 20 566 3.14E-151 T 22-04-2016 RPIC12D_RS13695 e7b8234beea6830c9fb4bb643131f0e5 569 PANTHER PTHR24096 175 564 1.2E-173 T 22-04-2016 RPIC12D_RS13695 e7b8234beea6830c9fb4bb643131f0e5 569 PANTHER PTHR24096 16 159 1.2E-173 T 22-04-2016 RPIC12D_RS02485 b25c3b4a84e1a55daa0c046f8b2b0f8f 453 Gene3D G3DSA:3.90.1300.10 9 452 9.8E-116 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC12D_RS02485 b25c3b4a84e1a55daa0c046f8b2b0f8f 453 Pfam PF01425 Amidase 26 441 3.1E-87 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC12D_RS02485 b25c3b4a84e1a55daa0c046f8b2b0f8f 453 PANTHER PTHR11895 9 449 2.6E-110 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC12D_RS02485 b25c3b4a84e1a55daa0c046f8b2b0f8f 453 SUPERFAMILY SSF75304 9 452 8.24E-114 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC12D_RS02485 b25c3b4a84e1a55daa0c046f8b2b0f8f 453 PANTHER PTHR11895:SF73 9 449 2.6E-110 T 22-04-2016 RPIC12D_RS13220 5fa2d4195737850c6f51618e5311681f 719 PANTHER PTHR31956 12 276 1.6E-142 T 22-04-2016 RPIC12D_RS13220 5fa2d4195737850c6f51618e5311681f 719 PANTHER PTHR31956 305 535 1.6E-142 T 22-04-2016 RPIC12D_RS13220 5fa2d4195737850c6f51618e5311681f 719 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 34 0.0015 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RPIC12D_RS13220 5fa2d4195737850c6f51618e5311681f 719 Pfam PF04185 Phosphoesterase family 55 450 5.0E-115 T 22-04-2016 IPR007312 Phosphoesterase GO:0016788 RPIC12D_RS13220 5fa2d4195737850c6f51618e5311681f 719 PANTHER PTHR31956:SF6 12 276 1.6E-142 T 22-04-2016 RPIC12D_RS13220 5fa2d4195737850c6f51618e5311681f 719 PANTHER PTHR31956:SF6 305 535 1.6E-142 T 22-04-2016 RPIC12D_RS13220 5fa2d4195737850c6f51618e5311681f 719 Pfam PF05506 Domain of unknown function (DUF756) 623 704 2.2E-28 T 22-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 RPIC12D_RS13220 5fa2d4195737850c6f51618e5311681f 719 Pfam PF05506 Domain of unknown function (DUF756) 522 611 9.2E-24 T 22-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 RPIC12D_RS13220 5fa2d4195737850c6f51618e5311681f 719 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 12 718 7.7E-290 T 22-04-2016 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 RPIC12D_RS26880 bc1621a10c421e9dbb7f792bf0482692 138 Gene3D G3DSA:3.30.565.10 46 119 3.3E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS26880 bc1621a10c421e9dbb7f792bf0482692 138 PANTHER PTHR24423 1 138 3.8E-35 T 22-04-2016 RPIC12D_RS26880 bc1621a10c421e9dbb7f792bf0482692 138 PANTHER PTHR24423:SF438 1 138 3.8E-35 T 22-04-2016 RPIC12D_RS26880 bc1621a10c421e9dbb7f792bf0482692 138 SUPERFAMILY SSF55874 36 117 8.53E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS13125 a99f49f6b22086921c5d42153154fac1 455 SUPERFAMILY SSF51246 331 444 1.67E-43 T 22-04-2016 IPR011054 Rudiment single hybrid motif RPIC12D_RS13125 a99f49f6b22086921c5d42153154fac1 455 SUPERFAMILY SSF52440 1 113 7.19E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS13125 a99f49f6b22086921c5d42153154fac1 455 Gene3D G3DSA:3.40.50.20 1 129 2.1E-52 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS13125 a99f49f6b22086921c5d42153154fac1 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.8E-45 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RPIC12D_RS13125 a99f49f6b22086921c5d42153154fac1 455 Gene3D G3DSA:3.30.470.20 204 444 1.2E-99 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC12D_RS13125 a99f49f6b22086921c5d42153154fac1 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 3.9E-226 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 RPIC12D_RS13125 a99f49f6b22086921c5d42153154fac1 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.7E-81 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS13125 a99f49f6b22086921c5d42153154fac1 455 SMART SM00878 336 441 3.6E-65 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC12D_RS13125 a99f49f6b22086921c5d42153154fac1 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS13125 a99f49f6b22086921c5d42153154fac1 455 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 6.7E-39 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC12D_RS13125 a99f49f6b22086921c5d42153154fac1 455 PANTHER PTHR18866 1 446 5.7E-296 T 22-04-2016 RPIC12D_RS13125 a99f49f6b22086921c5d42153154fac1 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS13125 a99f49f6b22086921c5d42153154fac1 455 Gene3D G3DSA:3.30.1490.20 130 203 6.1E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC12D_RS13125 a99f49f6b22086921c5d42153154fac1 455 SUPERFAMILY SSF56059 83 348 6.73E-73 T 22-04-2016 RPIC12D_RS02215 8829d2a6bfad8b17d3f608093cbd1df2 328 SUPERFAMILY SSF53187 12 323 1.49E-55 T 22-04-2016 RPIC12D_RS02215 8829d2a6bfad8b17d3f608093cbd1df2 328 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 44 184 3.7E-10 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 RPIC12D_RS02215 8829d2a6bfad8b17d3f608093cbd1df2 328 Gene3D G3DSA:3.40.630.10 35 156 3.2E-4 T 22-04-2016 RPIC12D_RS12385 60b079ed2c7a0e46c6318b62fa80d8a3 325 Pfam PF00491 Arginase family 41 313 2.4E-64 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS12385 60b079ed2c7a0e46c6318b62fa80d8a3 325 Gene3D G3DSA:3.40.800.10 4 316 4.9E-104 T 22-04-2016 IPR023696 Ureohydrolase domain RPIC12D_RS12385 60b079ed2c7a0e46c6318b62fa80d8a3 325 PANTHER PTHR11358 4 314 2.6E-103 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS12385 60b079ed2c7a0e46c6318b62fa80d8a3 325 TIGRFAM TIGR01227 hutG: formimidoylglutamase 10 313 4.2E-101 T 22-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 RPIC12D_RS12385 60b079ed2c7a0e46c6318b62fa80d8a3 325 PANTHER PTHR11358:SF35 4 314 2.6E-103 T 22-04-2016 RPIC12D_RS12385 60b079ed2c7a0e46c6318b62fa80d8a3 325 Hamap MF_00737 Formimidoylglutamase [hutG]. 5 315 44.317 T 22-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 RPIC12D_RS12385 60b079ed2c7a0e46c6318b62fa80d8a3 325 SUPERFAMILY SSF52768 9 313 2.7E-80 T 22-04-2016 RPIC12D_RS12385 60b079ed2c7a0e46c6318b62fa80d8a3 325 PIRSF PIRSF036979 29 316 2.8E-27 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS00335 b4f4a27d9921a0aa6fbfc609788240c3 612 PANTHER PTHR10937 1 612 1.1E-304 T 22-04-2016 RPIC12D_RS00335 b4f4a27d9921a0aa6fbfc609788240c3 612 Pfam PF01380 SIS domain 294 420 1.5E-27 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RPIC12D_RS00335 b4f4a27d9921a0aa6fbfc609788240c3 612 Pfam PF01380 SIS domain 465 594 3.0E-24 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RPIC12D_RS00335 b4f4a27d9921a0aa6fbfc609788240c3 612 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 612 7.8E-246 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RPIC12D_RS00335 b4f4a27d9921a0aa6fbfc609788240c3 612 Gene3D G3DSA:3.40.50.10490 249 445 7.0E-71 T 22-04-2016 RPIC12D_RS00335 b4f4a27d9921a0aa6fbfc609788240c3 612 Gene3D G3DSA:3.60.20.10 2 241 2.6E-72 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS00335 b4f4a27d9921a0aa6fbfc609788240c3 612 PANTHER PTHR10937:SF0 1 612 1.1E-304 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RPIC12D_RS00335 b4f4a27d9921a0aa6fbfc609788240c3 612 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 612 38.831 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RPIC12D_RS00335 b4f4a27d9921a0aa6fbfc609788240c3 612 SUPERFAMILY SSF53697 250 612 3.99E-109 T 22-04-2016 RPIC12D_RS00335 b4f4a27d9921a0aa6fbfc609788240c3 612 SUPERFAMILY SSF56235 2 239 1.37E-67 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS00335 b4f4a27d9921a0aa6fbfc609788240c3 612 Gene3D G3DSA:3.40.50.10490 446 612 4.1E-64 T 22-04-2016 RPIC12D_RS00335 b4f4a27d9921a0aa6fbfc609788240c3 612 Pfam PF13522 Glutamine amidotransferase domain 57 197 5.6E-22 T 22-04-2016 RPIC12D_RS05580 bee1e4ad3c56a4f6b2f67a470977e98c 551 SUPERFAMILY SSF52540 286 537 1.03E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05580 bee1e4ad3c56a4f6b2f67a470977e98c 551 SMART SM00382 323 516 4.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS05580 bee1e4ad3c56a4f6b2f67a470977e98c 551 SMART SM00382 47 244 1.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS05580 bee1e4ad3c56a4f6b2f67a470977e98c 551 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS05580 bee1e4ad3c56a4f6b2f67a470977e98c 551 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS05580 bee1e4ad3c56a4f6b2f67a470977e98c 551 PANTHER PTHR24220 19 424 4.6E-159 T 22-04-2016 RPIC12D_RS05580 bee1e4ad3c56a4f6b2f67a470977e98c 551 SUPERFAMILY SSF52540 17 265 7.86E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05580 bee1e4ad3c56a4f6b2f67a470977e98c 551 Pfam PF00005 ABC transporter 315 467 1.0E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS05580 bee1e4ad3c56a4f6b2f67a470977e98c 551 Pfam PF00005 ABC transporter 39 194 3.4E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS05580 bee1e4ad3c56a4f6b2f67a470977e98c 551 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 246 273 3.8E-5 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIC12D_RS05580 bee1e4ad3c56a4f6b2f67a470977e98c 551 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 518 542 6.9E-4 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIC12D_RS05580 bee1e4ad3c56a4f6b2f67a470977e98c 551 PANTHER PTHR24220:SF574 19 424 4.6E-159 T 22-04-2016 RPIC12D_RS05580 bee1e4ad3c56a4f6b2f67a470977e98c 551 Gene3D G3DSA:3.40.50.300 16 268 2.3E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05580 bee1e4ad3c56a4f6b2f67a470977e98c 551 Gene3D G3DSA:3.40.50.300 285 540 3.5E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07010 ca249540945ad0ac7192a742c30ae73d 308 PANTHER PTHR30237:SF2 3 307 2.8E-78 T 22-04-2016 RPIC12D_RS07010 ca249540945ad0ac7192a742c30ae73d 308 Gene3D G3DSA:3.40.50.10740 3 155 5.2E-35 T 22-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RPIC12D_RS07010 ca249540945ad0ac7192a742c30ae73d 308 SUPERFAMILY SSF52317 3 159 1.65E-32 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS07010 ca249540945ad0ac7192a742c30ae73d 308 PANTHER PTHR30237 3 307 2.8E-78 T 22-04-2016 RPIC12D_RS07010 ca249540945ad0ac7192a742c30ae73d 308 PIRSF PIRSF028757 1 302 1.4E-71 T 22-04-2016 IPR003507 Peptidase family S66 RPIC12D_RS07010 ca249540945ad0ac7192a742c30ae73d 308 Pfam PF02016 LD-carboxypeptidase 4 289 9.7E-66 T 22-04-2016 IPR003507 Peptidase family S66 RPIC12D_RS07010 ca249540945ad0ac7192a742c30ae73d 308 Gene3D G3DSA:3.50.30.60 166 297 1.5E-45 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain RPIC12D_RS07010 ca249540945ad0ac7192a742c30ae73d 308 SUPERFAMILY SSF141986 137 293 2.35E-45 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain RPIC12D_RS05795 5f6625f01fff62e9d7e28d4b7c730c1c 450 Pfam PF13393 Histidyl-tRNA synthetase 27 329 1.2E-46 T 22-04-2016 RPIC12D_RS05795 5f6625f01fff62e9d7e28d4b7c730c1c 450 PANTHER PTHR11476 1 449 3.8E-194 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RPIC12D_RS05795 5f6625f01fff62e9d7e28d4b7c730c1c 450 PIRSF PIRSF001549 19 445 1.9E-110 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RPIC12D_RS05795 5f6625f01fff62e9d7e28d4b7c730c1c 450 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 20 443 32.312 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 RPIC12D_RS05795 5f6625f01fff62e9d7e28d4b7c730c1c 450 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 25 422 7.1E-150 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 RPIC12D_RS05795 5f6625f01fff62e9d7e28d4b7c730c1c 450 SUPERFAMILY SSF52954 344 444 7.2E-20 T 22-04-2016 IPR004154 Anticodon-binding RPIC12D_RS05795 5f6625f01fff62e9d7e28d4b7c730c1c 450 Gene3D G3DSA:3.30.930.10 238 341 1.0E-90 T 22-04-2016 RPIC12D_RS05795 5f6625f01fff62e9d7e28d4b7c730c1c 450 Gene3D G3DSA:3.30.930.10 22 202 1.0E-90 T 22-04-2016 RPIC12D_RS05795 5f6625f01fff62e9d7e28d4b7c730c1c 450 Pfam PF03129 Anticodon binding domain 347 442 5.1E-10 T 22-04-2016 IPR004154 Anticodon-binding RPIC12D_RS05795 5f6625f01fff62e9d7e28d4b7c730c1c 450 PANTHER PTHR11476:SF9 1 449 3.8E-194 T 22-04-2016 RPIC12D_RS05795 5f6625f01fff62e9d7e28d4b7c730c1c 450 SUPERFAMILY SSF55681 24 335 3.25E-97 T 22-04-2016 RPIC12D_RS05795 5f6625f01fff62e9d7e28d4b7c730c1c 450 Gene3D G3DSA:3.40.50.800 343 443 4.9E-30 T 22-04-2016 IPR004154 Anticodon-binding RPIC12D_RS07385 56884fe96adab4eea91a9e64104e7391 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07385 56884fe96adab4eea91a9e64104e7391 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07385 56884fe96adab4eea91a9e64104e7391 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07385 56884fe96adab4eea91a9e64104e7391 301 SUPERFAMILY SSF53850 94 293 1.71E-27 T 22-04-2016 RPIC12D_RS07385 56884fe96adab4eea91a9e64104e7391 301 Gene3D G3DSA:3.40.190.10 92 189 1.6E-14 T 22-04-2016 RPIC12D_RS07385 56884fe96adab4eea91a9e64104e7391 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.5E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07385 56884fe96adab4eea91a9e64104e7391 301 SUPERFAMILY SSF46785 1 81 1.52E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07385 56884fe96adab4eea91a9e64104e7391 301 Pfam PF03466 LysR substrate binding domain 95 296 1.7E-22 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS07385 56884fe96adab4eea91a9e64104e7391 301 Gene3D G3DSA:1.10.10.10 1 82 2.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07385 56884fe96adab4eea91a9e64104e7391 301 PANTHER PTHR30419 1 295 1.5E-52 T 22-04-2016 RPIC12D_RS07385 56884fe96adab4eea91a9e64104e7391 301 PANTHER PTHR30419:SF7 1 295 1.5E-52 T 22-04-2016 RPIC12D_RS12940 c79799c121129a7532c1bda332118b69 304 PANTHER PTHR10907 11 297 8.0E-77 T 22-04-2016 RPIC12D_RS12940 c79799c121129a7532c1bda332118b69 304 Gene3D G3DSA:2.120.10.30 3 297 1.1E-87 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like RPIC12D_RS12940 c79799c121129a7532c1bda332118b69 304 PANTHER PTHR10907:SF47 11 297 8.0E-77 T 22-04-2016 RPIC12D_RS12940 c79799c121129a7532c1bda332118b69 304 SUPERFAMILY SSF63829 9 294 4.74E-65 T 22-04-2016 RPIC12D_RS12940 c79799c121129a7532c1bda332118b69 304 SMART SM00135 138 180 1.6E-4 T 22-04-2016 IPR000033 LDLR class B repeat RPIC12D_RS12940 c79799c121129a7532c1bda332118b69 304 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 14 264 2.1E-77 T 22-04-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region RPIC12D_RS12940 c79799c121129a7532c1bda332118b69 304 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 92 113 6.6E-33 T 22-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) RPIC12D_RS12940 c79799c121129a7532c1bda332118b69 304 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 134 156 6.6E-33 T 22-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) RPIC12D_RS12940 c79799c121129a7532c1bda332118b69 304 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 245 263 6.6E-33 T 22-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) RPIC12D_RS12940 c79799c121129a7532c1bda332118b69 304 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 15 32 6.6E-33 T 22-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) RPIC12D_RS12940 c79799c121129a7532c1bda332118b69 304 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 157 177 6.6E-33 T 22-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) RPIC12D_RS12940 c79799c121129a7532c1bda332118b69 304 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 203 220 6.6E-33 T 22-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) RPIC12D_RS04625 be75aadeb4c851cbc6c7cbb3890f3a7a 132 SUPERFAMILY SSF54427 15 123 4.93E-31 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS04625 be75aadeb4c851cbc6c7cbb3890f3a7a 132 Pfam PF12680 SnoaL-like domain 17 115 3.2E-12 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RPIC12D_RS04625 be75aadeb4c851cbc6c7cbb3890f3a7a 132 Gene3D G3DSA:3.10.450.50 13 124 8.3E-11 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS13095 7fc046b80fef3f1d69a54516b7b43a7b 207 SUPERFAMILY SSF53474 5 191 6.93E-18 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS13095 7fc046b80fef3f1d69a54516b7b43a7b 207 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 192 3.3E-67 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA RPIC12D_RS13095 7fc046b80fef3f1d69a54516b7b43a7b 207 PANTHER PTHR35602 1 197 8.3E-65 T 22-04-2016 RPIC12D_RS13095 7fc046b80fef3f1d69a54516b7b43a7b 207 Gene3D G3DSA:3.40.50.1820 4 187 5.7E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS13095 7fc046b80fef3f1d69a54516b7b43a7b 207 PANTHER PTHR35602:SF3 1 197 8.3E-65 T 22-04-2016 RPIC12D_RS16055 00807dcacf1db55432c825416e4d5b46 298 PANTHER PTHR30537 1 295 1.2E-81 T 22-04-2016 RPIC12D_RS16055 00807dcacf1db55432c825416e4d5b46 298 SUPERFAMILY SSF46785 6 116 2.16E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16055 00807dcacf1db55432c825416e4d5b46 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS16055 00807dcacf1db55432c825416e4d5b46 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS16055 00807dcacf1db55432c825416e4d5b46 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS16055 00807dcacf1db55432c825416e4d5b46 298 SUPERFAMILY SSF53850 93 290 3.26E-38 T 22-04-2016 RPIC12D_RS16055 00807dcacf1db55432c825416e4d5b46 298 Gene3D G3DSA:1.10.10.10 9 89 1.1E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16055 00807dcacf1db55432c825416e4d5b46 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.6E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS16055 00807dcacf1db55432c825416e4d5b46 298 PANTHER PTHR30537:SF3 1 295 1.2E-81 T 22-04-2016 RPIC12D_RS16055 00807dcacf1db55432c825416e4d5b46 298 Gene3D G3DSA:3.40.190.10 96 196 7.8E-22 T 22-04-2016 RPIC12D_RS16055 00807dcacf1db55432c825416e4d5b46 298 Pfam PF03466 LysR substrate binding domain 92 289 4.6E-35 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS06190 e1fd13110ce9b4437e2b727113edc7dc 258 SUPERFAMILY SSF141868 30 247 2.35E-56 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS06190 e1fd13110ce9b4437e2b727113edc7dc 258 Gene3D G3DSA:3.20.20.450 29 247 3.6E-47 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS06190 e1fd13110ce9b4437e2b727113edc7dc 258 PANTHER PTHR33121 28 258 2.8E-80 T 22-04-2016 RPIC12D_RS06190 e1fd13110ce9b4437e2b727113edc7dc 258 PANTHER PTHR33121:SF15 28 258 2.8E-80 T 22-04-2016 RPIC12D_RS06190 e1fd13110ce9b4437e2b727113edc7dc 258 SMART SM00052 24 251 9.5E-28 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS06190 e1fd13110ce9b4437e2b727113edc7dc 258 Pfam PF00563 EAL domain 29 246 3.1E-43 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS13550 82506b39f62df45c3ed9e6bbfbd340f9 252 PANTHER PTHR39455 2 251 2.4E-56 T 22-04-2016 RPIC12D_RS13550 82506b39f62df45c3ed9e6bbfbd340f9 252 SUPERFAMILY SSF160950 2 250 5.23E-88 T 22-04-2016 RPIC12D_RS13550 82506b39f62df45c3ed9e6bbfbd340f9 252 Hamap MF_01092 Cell division protein ZapD [zapD]. 1 250 33.264 T 22-04-2016 IPR009777 Cell division protein ZapD RPIC12D_RS13550 82506b39f62df45c3ed9e6bbfbd340f9 252 Gene3D G3DSA:1.10.3900.10 10 171 3.9E-67 T 22-04-2016 RPIC12D_RS13550 82506b39f62df45c3ed9e6bbfbd340f9 252 Gene3D G3DSA:2.60.440.10 172 250 4.6E-20 T 22-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain RPIC12D_RS13550 82506b39f62df45c3ed9e6bbfbd340f9 252 Pfam PF07072 Protein of unknown function (DUF1342) 16 226 3.0E-82 T 22-04-2016 IPR009777 Cell division protein ZapD RPIC12D_RS13550 82506b39f62df45c3ed9e6bbfbd340f9 252 PANTHER PTHR39455:SF1 2 251 2.4E-56 T 22-04-2016 RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 SUPERFAMILY SSF55326 661 858 1.07E-65 T 22-04-2016 RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 SUPERFAMILY SSF56042 469 697 1.08E-48 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 SMART SM01211 1112 1367 7.1E-142 T 22-04-2016 RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 4 1368 21.253 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 SUPERFAMILY SSF55326 237 464 6.28E-57 T 22-04-2016 RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 8 1367 0.0 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 Pfam PF02769 AIR synthase related protein, C-terminal domain 885 1029 8.2E-11 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 Pfam PF02769 AIR synthase related protein, C-terminal domain 469 626 4.8E-24 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1112 1367 4.3E-100 T 22-04-2016 RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 Gene3D G3DSA:3.30.1330.10 687 852 4.4E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 Gene3D G3DSA:3.30.1330.10 227 458 8.0E-39 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 PANTHER PTHR10099 3 374 0.0 T 22-04-2016 RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 PANTHER PTHR10099 393 961 0.0 T 22-04-2016 RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 PANTHER PTHR10099 987 1368 0.0 T 22-04-2016 RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 SUPERFAMILY SSF82697 4 164 2.14E-40 T 22-04-2016 RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 Gene3D G3DSA:3.40.50.880 1113 1332 1.5E-11 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 PANTHER PTHR10099:SF5 3 374 0.0 T 22-04-2016 RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 PANTHER PTHR10099:SF5 393 961 0.0 T 22-04-2016 RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 PANTHER PTHR10099:SF5 987 1368 0.0 T 22-04-2016 RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 SUPERFAMILY SSF56042 869 1105 2.09E-51 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 SUPERFAMILY SSF52317 1108 1367 1.96E-87 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS07655 9448873ad630dbd3f5a9dac7a3fe7bb0 1368 SUPERFAMILY SSF109736 178 236 3.53E-21 T 22-04-2016 RPIC12D_RS11140 611ee1902bb1f230424c82536a08f59d 557 PANTHER PTHR21000:SF5 4 557 0.0 T 22-04-2016 RPIC12D_RS11140 611ee1902bb1f230424c82536a08f59d 557 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS11140 611ee1902bb1f230424c82536a08f59d 557 SUPERFAMILY SSF52016 380 557 8.63E-56 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RPIC12D_RS11140 611ee1902bb1f230424c82536a08f59d 557 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 5 557 43.364 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS11140 611ee1902bb1f230424c82536a08f59d 557 SUPERFAMILY SSF143975 4 378 2.09E-132 T 22-04-2016 RPIC12D_RS11140 611ee1902bb1f230424c82536a08f59d 557 Pfam PF00920 Dehydratase family 36 554 2.8E-202 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS11140 611ee1902bb1f230424c82536a08f59d 557 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 123 133 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS11140 611ee1902bb1f230424c82536a08f59d 557 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 557 5.5E-223 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS11140 611ee1902bb1f230424c82536a08f59d 557 PANTHER PTHR21000 4 557 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 PANTHER PTHR11946 290 906 0.0 T 22-04-2016 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 PANTHER PTHR11946 16 267 0.0 T 22-04-2016 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 Gene3D G3DSA:1.10.730.10 672 857 1.5E-39 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 246 269 3.6E-26 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 59 70 3.6E-26 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 416 431 3.6E-26 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 592 601 3.6E-26 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 66 77 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 23 873 2.5E-257 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 10 950 20.092 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 SUPERFAMILY SSF52374 21 209 2.3E-123 T 22-04-2016 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 SUPERFAMILY SSF52374 418 679 2.3E-123 T 22-04-2016 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 Pfam PF06827 Zinc finger found in FPG and IleRS 921 946 1.2E-7 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 SUPERFAMILY SSF47323 683 949 5.61E-71 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 SUPERFAMILY SSF50677 234 418 2.41E-49 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 Pfam PF08264 Anticodon-binding domain of tRNA 716 872 2.3E-23 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 Gene3D G3DSA:3.40.50.620 22 205 2.5E-124 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 Gene3D G3DSA:3.40.50.620 421 667 2.5E-124 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 36 672 8.7E-205 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 PANTHER PTHR11946:SF11 290 906 0.0 T 22-04-2016 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 PANTHER PTHR11946:SF11 16 267 0.0 T 22-04-2016 RPIC12D_RS11715 ba59863378aa9ad798f035759b04003b 959 Gene3D G3DSA:3.90.740.10 214 404 4.9E-50 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RPIC12D_RS21895 dc081e877ac5bde015e9e4624ceafd5a 271 PANTHER PTHR10192 1 271 2.6E-109 T 22-04-2016 RPIC12D_RS21895 dc081e877ac5bde015e9e4624ceafd5a 271 SUPERFAMILY SSF53218 171 271 2.22E-29 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS21895 dc081e877ac5bde015e9e4624ceafd5a 271 Gene3D G3DSA:3.90.105.10 136 156 5.4E-22 T 22-04-2016 RPIC12D_RS21895 dc081e877ac5bde015e9e4624ceafd5a 271 Gene3D G3DSA:3.90.105.10 18 39 5.4E-22 T 22-04-2016 RPIC12D_RS21895 dc081e877ac5bde015e9e4624ceafd5a 271 PANTHER PTHR10192:SF11 1 271 2.6E-109 T 22-04-2016 RPIC12D_RS21895 dc081e877ac5bde015e9e4624ceafd5a 271 Gene3D G3DSA:2.170.190.11 40 135 1.6E-26 T 22-04-2016 RPIC12D_RS21895 dc081e877ac5bde015e9e4624ceafd5a 271 Pfam PF03453 MoeA N-terminal region (domain I and II) 2 161 1.2E-34 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS21895 dc081e877ac5bde015e9e4624ceafd5a 271 SMART SM00852 174 271 3.0E-13 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS21895 dc081e877ac5bde015e9e4624ceafd5a 271 Pfam PF00994 Probable molybdopterin binding domain 176 269 7.5E-20 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS21895 dc081e877ac5bde015e9e4624ceafd5a 271 SUPERFAMILY SSF63882 1 169 3.92E-51 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS21895 dc081e877ac5bde015e9e4624ceafd5a 271 Gene3D G3DSA:3.40.980.10 157 271 9.2E-44 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS17115 f782e5529a39d12a4807ffe415e88309 441 Gene3D G3DSA:1.20.1250.20 26 230 1.8E-46 T 22-04-2016 RPIC12D_RS17115 f782e5529a39d12a4807ffe415e88309 441 PANTHER PTHR11662:SF3 19 427 4.1E-156 T 22-04-2016 RPIC12D_RS17115 f782e5529a39d12a4807ffe415e88309 441 PANTHER PTHR11662 19 427 4.1E-156 T 22-04-2016 RPIC12D_RS17115 f782e5529a39d12a4807ffe415e88309 441 Gene3D G3DSA:1.20.1250.20 249 434 2.8E-23 T 22-04-2016 RPIC12D_RS17115 f782e5529a39d12a4807ffe415e88309 441 Pfam PF07690 Major Facilitator Superfamily 34 400 3.8E-47 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS17115 f782e5529a39d12a4807ffe415e88309 441 SUPERFAMILY SSF103473 23 439 3.01E-86 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS06110 1bf62d0844c5add69a64786fbebe28f9 509 Gene3D G3DSA:1.20.1600.10 168 340 3.7E-92 T 22-04-2016 RPIC12D_RS06110 1bf62d0844c5add69a64786fbebe28f9 509 Gene3D G3DSA:1.20.1600.10 75 114 3.7E-92 T 22-04-2016 RPIC12D_RS06110 1bf62d0844c5add69a64786fbebe28f9 509 Gene3D G3DSA:1.20.1600.10 378 491 3.7E-92 T 22-04-2016 RPIC12D_RS06110 1bf62d0844c5add69a64786fbebe28f9 509 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 35 491 1.2E-161 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RPIC12D_RS06110 1bf62d0844c5add69a64786fbebe28f9 509 Pfam PF02321 Outer membrane efflux protein 313 489 1.1E-22 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC12D_RS06110 1bf62d0844c5add69a64786fbebe28f9 509 Pfam PF02321 Outer membrane efflux protein 90 280 5.3E-23 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC12D_RS06110 1bf62d0844c5add69a64786fbebe28f9 509 PANTHER PTHR30203 13 509 1.5E-128 T 22-04-2016 RPIC12D_RS06110 1bf62d0844c5add69a64786fbebe28f9 509 SUPERFAMILY SSF56954 28 492 4.71E-97 T 22-04-2016 RPIC12D_RS06110 1bf62d0844c5add69a64786fbebe28f9 509 PANTHER PTHR30203:SF6 13 509 1.5E-128 T 22-04-2016 RPIC12D_RS06110 1bf62d0844c5add69a64786fbebe28f9 509 Gene3D G3DSA:2.20.200.10 341 376 5.5E-23 T 22-04-2016 RPIC12D_RS06110 1bf62d0844c5add69a64786fbebe28f9 509 Gene3D G3DSA:2.20.200.10 124 167 5.5E-23 T 22-04-2016 RPIC12D_RS10105 7ca1c39f897fba9275064516bf21161f 280 Pfam PF00535 Glycosyl transferase family 2 12 119 5.6E-20 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RPIC12D_RS10105 7ca1c39f897fba9275064516bf21161f 280 Pfam PF02709 N-terminal domain of galactosyltransferase 183 242 4.9E-15 T 22-04-2016 IPR027791 Galactosyltransferase, C-terminal UniPathway: UPA00378 RPIC12D_RS10105 7ca1c39f897fba9275064516bf21161f 280 PANTHER PTHR22916 176 230 5.2E-44 T 22-04-2016 RPIC12D_RS10105 7ca1c39f897fba9275064516bf21161f 280 PANTHER PTHR22916 9 150 5.2E-44 T 22-04-2016 RPIC12D_RS10105 7ca1c39f897fba9275064516bf21161f 280 SUPERFAMILY SSF53448 180 261 1.31E-40 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS10105 7ca1c39f897fba9275064516bf21161f 280 SUPERFAMILY SSF53448 7 130 1.31E-40 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS10105 7ca1c39f897fba9275064516bf21161f 280 Gene3D G3DSA:3.90.550.10 4 145 8.9E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS10105 7ca1c39f897fba9275064516bf21161f 280 Gene3D G3DSA:3.90.550.10 181 277 8.9E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS10105 7ca1c39f897fba9275064516bf21161f 280 PANTHER PTHR22916:SF31 176 230 5.2E-44 T 22-04-2016 RPIC12D_RS10105 7ca1c39f897fba9275064516bf21161f 280 PANTHER PTHR22916:SF31 9 150 5.2E-44 T 22-04-2016 RPIC12D_RS10670 a7cfc73b3c29dd81d05ef108308b2555 522 PANTHER PTHR11552:SF139 12 519 1.5E-98 T 22-04-2016 RPIC12D_RS10670 a7cfc73b3c29dd81d05ef108308b2555 522 SUPERFAMILY SSF54373 291 458 1.88E-12 T 22-04-2016 RPIC12D_RS10670 a7cfc73b3c29dd81d05ef108308b2555 522 SUPERFAMILY SSF51905 457 517 5.78E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10670 a7cfc73b3c29dd81d05ef108308b2555 522 SUPERFAMILY SSF51905 12 309 5.78E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10670 a7cfc73b3c29dd81d05ef108308b2555 522 PANTHER PTHR11552 12 519 1.5E-98 T 22-04-2016 RPIC12D_RS10670 a7cfc73b3c29dd81d05ef108308b2555 522 Pfam PF05199 GMC oxidoreductase 390 508 4.8E-21 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 RPIC12D_RS10670 a7cfc73b3c29dd81d05ef108308b2555 522 Gene3D G3DSA:3.50.50.60 417 516 4.2E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10670 a7cfc73b3c29dd81d05ef108308b2555 522 Gene3D G3DSA:3.50.50.60 12 141 4.2E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10670 a7cfc73b3c29dd81d05ef108308b2555 522 Gene3D G3DSA:3.50.50.60 199 305 4.2E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10670 a7cfc73b3c29dd81d05ef108308b2555 522 Pfam PF00732 GMC oxidoreductase 13 304 2.7E-22 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 Gene3D G3DSA:3.40.50.620 604 625 6.3E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 Gene3D G3DSA:3.40.50.620 352 566 6.3E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 Gene3D G3DSA:3.40.50.620 10 199 6.3E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 22 626 3.8E-204 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 SUPERFAMILY SSF50677 197 353 3.14E-61 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 PANTHER PTHR11946 885 952 0.0 T 22-04-2016 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 PANTHER PTHR11946 1 565 0.0 T 22-04-2016 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 PANTHER PTHR11946 603 863 0.0 T 22-04-2016 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 Gene3D G3DSA:1.10.730.10 626 823 1.8E-63 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 Gene3D G3DSA:1.10.287.380 887 953 2.3E-6 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 889 953 6.4E-19 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 SUPERFAMILY SSF46589 889 953 1.62E-16 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 PANTHER PTHR11946:SF5 885 952 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 PANTHER PTHR11946:SF5 1 565 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 PANTHER PTHR11946:SF5 603 863 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 SUPERFAMILY SSF47323 637 903 2.06E-61 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 Pfam PF08264 Anticodon-binding domain of tRNA 677 831 7.2E-41 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 Hamap MF_02004 Valine--tRNA ligase [valS]. 8 954 15.641 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 Gene3D G3DSA:3.90.740.10 200 348 1.1E-49 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 SUPERFAMILY SSF52374 604 636 4.77E-134 T 22-04-2016 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 SUPERFAMILY SSF52374 352 566 4.77E-134 T 22-04-2016 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 SUPERFAMILY SSF52374 7 198 4.77E-134 T 22-04-2016 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 TIGRFAM TIGR00422 valS: valine--tRNA ligase 9 934 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 PRINTS PR00986 Valyl-tRNA synthetase signature 501 519 1.5E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 1.5E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 PRINTS PR00986 Valyl-tRNA synthetase signature 470 491 1.5E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 PRINTS PR00986 Valyl-tRNA synthetase signature 357 370 1.5E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC12D_RS10315 9dc1559b6442cd715564fa09b5ba0a2b 958 PRINTS PR00986 Valyl-tRNA synthetase signature 241 258 1.5E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC12D_RS13780 9d1890b2e5d5c33231c7ea2460ed8e2a 153 Gene3D G3DSA:3.10.129.10 11 142 4.8E-48 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS13780 9d1890b2e5d5c33231c7ea2460ed8e2a 153 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 29 139 2.6E-47 T 22-04-2016 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- RPIC12D_RS13780 9d1890b2e5d5c33231c7ea2460ed8e2a 153 SUPERFAMILY SSF54637 12 144 1.69E-31 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS13780 9d1890b2e5d5c33231c7ea2460ed8e2a 153 PANTHER PTHR12418:SF24 18 153 2.3E-44 T 22-04-2016 RPIC12D_RS13780 9d1890b2e5d5c33231c7ea2460ed8e2a 153 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 138 4.5E-26 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain RPIC12D_RS13780 9d1890b2e5d5c33231c7ea2460ed8e2a 153 PANTHER PTHR12418 18 153 2.3E-44 T 22-04-2016 RPIC12D_RS13780 9d1890b2e5d5c33231c7ea2460ed8e2a 153 Pfam PF03061 Thioesterase superfamily 58 130 1.1E-13 T 22-04-2016 IPR006683 Thioesterase domain RPIC12D_RS05210 cd24cf54ef35c7f54d59cd52ad54c65f 508 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 40 5.3E-6 T 22-04-2016 RPIC12D_RS05210 cd24cf54ef35c7f54d59cd52ad54c65f 508 Gene3D G3DSA:3.30.420.10 174 293 6.7E-4 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS05210 cd24cf54ef35c7f54d59cd52ad54c65f 508 Pfam PF00665 Integrase core domain 131 256 4.0E-15 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC12D_RS05210 cd24cf54ef35c7f54d59cd52ad54c65f 508 PANTHER PTHR35004:SF2 2 447 5.9E-74 T 22-04-2016 RPIC12D_RS05210 cd24cf54ef35c7f54d59cd52ad54c65f 508 PANTHER PTHR35004 2 447 5.9E-74 T 22-04-2016 RPIC12D_RS05210 cd24cf54ef35c7f54d59cd52ad54c65f 508 Gene3D G3DSA:1.10.10.60 17 40 6.1E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS08150 9d97a20e6052c5c10f84e107df578692 211 SUPERFAMILY SSF52172 12 162 9.25E-33 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS08150 9d97a20e6052c5c10f84e107df578692 211 Gene3D G3DSA:1.10.10.10 151 209 8.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08150 9d97a20e6052c5c10f84e107df578692 211 SUPERFAMILY SSF46894 142 209 2.93E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS08150 9d97a20e6052c5c10f84e107df578692 211 PANTHER PTHR26402:SF613 13 207 1.0E-64 T 22-04-2016 RPIC12D_RS08150 9d97a20e6052c5c10f84e107df578692 211 PANTHER PTHR26402 13 207 1.0E-64 T 22-04-2016 RPIC12D_RS08150 9d97a20e6052c5c10f84e107df578692 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS08150 9d97a20e6052c5c10f84e107df578692 211 Pfam PF00072 Response regulator receiver domain 15 125 7.0E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS08150 9d97a20e6052c5c10f84e107df578692 211 SMART SM00421 149 206 1.1E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS08150 9d97a20e6052c5c10f84e107df578692 211 SMART SM00448 13 125 4.9E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS08150 9d97a20e6052c5c10f84e107df578692 211 Gene3D G3DSA:3.40.50.2300 11 135 5.4E-33 T 22-04-2016 RPIC12D_RS08150 9d97a20e6052c5c10f84e107df578692 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 2.6E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS08150 9d97a20e6052c5c10f84e107df578692 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 2.6E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS08150 9d97a20e6052c5c10f84e107df578692 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 2.6E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS08150 9d97a20e6052c5c10f84e107df578692 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 8.5E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 326 399 5.1E-15 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 51 110 5.2E-15 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 Gene3D G3DSA:3.30.413.10 120 276 4.2E-40 T 22-04-2016 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 SUPERFAMILY SSF55124 251 275 9.32E-26 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 SUPERFAMILY SSF55124 314 421 9.32E-26 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 Gene3D G3DSA:3.30.413.10 408 548 2.4E-36 T 22-04-2016 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 PRINTS PR00397 Sirohaem Fe-binding site signature 410 428 4.2E-5 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 PRINTS PR00397 Sirohaem Fe-binding site signature 456 474 4.2E-5 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 411 549 2.0E-11 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 272 1.2E-40 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 SUPERFAMILY SSF55124 1 126 2.62E-29 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 SUPERFAMILY SSF56014 409 550 1.96E-39 T 22-04-2016 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 SUPERFAMILY SSF56014 120 286 4.32E-46 T 22-04-2016 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 Gene3D G3DSA:3.90.480.10 320 402 2.9E-38 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 Gene3D G3DSA:3.90.480.10 48 117 2.9E-38 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 PANTHER PTHR11493:SF47 1 293 1.9E-158 T 22-04-2016 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 PANTHER PTHR11493:SF47 326 550 1.9E-158 T 22-04-2016 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 PANTHER PTHR11493 1 293 1.9E-158 T 22-04-2016 RPIC12D_RS11205 db3211fc4e252836d28b4e38761762f5 553 PANTHER PTHR11493 326 550 1.9E-158 T 22-04-2016 RPIC12D_RS16025 3598eaaa0c10e156e2743d67270bc983 222 Pfam PF02527 rRNA small subunit methyltransferase G 29 216 1.0E-48 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RPIC12D_RS16025 3598eaaa0c10e156e2743d67270bc983 222 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 32 218 1.2E-47 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RPIC12D_RS16025 3598eaaa0c10e156e2743d67270bc983 222 PANTHER PTHR31760 1 219 2.3E-63 T 22-04-2016 RPIC12D_RS16025 3598eaaa0c10e156e2743d67270bc983 222 PIRSF PIRSF003078 5 221 6.9E-54 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RPIC12D_RS16025 3598eaaa0c10e156e2743d67270bc983 222 SUPERFAMILY SSF53335 12 219 2.39E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS16025 3598eaaa0c10e156e2743d67270bc983 222 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 20 217 26.567 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RPIC12D_RS16025 3598eaaa0c10e156e2743d67270bc983 222 Gene3D G3DSA:3.40.50.150 8 220 3.1E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS16025 3598eaaa0c10e156e2743d67270bc983 222 PANTHER PTHR31760:SF0 1 219 2.3E-63 T 22-04-2016 RPIC12D_RS01495 a556c70cb23c8fac80187c7cf73b90b4 206 Pfam PF01810 LysE type translocator 13 204 4.7E-38 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS01495 a556c70cb23c8fac80187c7cf73b90b4 206 PANTHER PTHR30086:SF3 1 204 1.9E-70 T 22-04-2016 RPIC12D_RS01495 a556c70cb23c8fac80187c7cf73b90b4 206 PIRSF PIRSF006324 1 206 5.4E-60 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS01495 a556c70cb23c8fac80187c7cf73b90b4 206 PANTHER PTHR30086 1 204 1.9E-70 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS13140 a36a7e989f52c80d149ab7b3b2a88853 166 Gene3D G3DSA:3.40.30.10 2 166 1.7E-47 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS13140 a36a7e989f52c80d149ab7b3b2a88853 166 SUPERFAMILY SSF52833 1 163 9.61E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS13140 a36a7e989f52c80d149ab7b3b2a88853 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 22-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 RPIC12D_RS13140 a36a7e989f52c80d149ab7b3b2a88853 166 PANTHER PTHR10681:SF81 3 166 2.8E-48 T 22-04-2016 RPIC12D_RS13140 a36a7e989f52c80d149ab7b3b2a88853 166 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 166 39.746 T 22-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 RPIC12D_RS13140 a36a7e989f52c80d149ab7b3b2a88853 166 PANTHER PTHR10681 3 166 2.8E-48 T 22-04-2016 RPIC12D_RS13140 a36a7e989f52c80d149ab7b3b2a88853 166 Pfam PF08534 Redoxin 20 162 4.1E-27 T 22-04-2016 IPR013740 Redoxin GO:0016491 RPIC12D_RS05530 9204a1ab0d9c225315ac08cc97500b63 463 Pfam PF09190 DALR domain 348 403 2.1E-17 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RPIC12D_RS05530 9204a1ab0d9c225315ac08cc97500b63 463 Gene3D G3DSA:3.40.50.620 21 310 2.8E-109 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS05530 9204a1ab0d9c225315ac08cc97500b63 463 Gene3D G3DSA:1.20.120.640 312 393 3.5E-22 T 22-04-2016 RPIC12D_RS05530 9204a1ab0d9c225315ac08cc97500b63 463 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 317 2.1E-130 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 RPIC12D_RS05530 9204a1ab0d9c225315ac08cc97500b63 463 SUPERFAMILY SSF52374 4 318 1.61E-98 T 22-04-2016 RPIC12D_RS05530 9204a1ab0d9c225315ac08cc97500b63 463 PANTHER PTHR10890 4 463 1.4E-235 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIC12D_RS05530 9204a1ab0d9c225315ac08cc97500b63 463 SUPERFAMILY SSF47323 321 461 2.22E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS05530 9204a1ab0d9c225315ac08cc97500b63 463 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 4 462 3.0E-173 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 RPIC12D_RS05530 9204a1ab0d9c225315ac08cc97500b63 463 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 462 39.078 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 RPIC12D_RS05530 9204a1ab0d9c225315ac08cc97500b63 463 SMART SM00840 348 403 2.8E-25 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RPIC12D_RS05530 9204a1ab0d9c225315ac08cc97500b63 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 227 248 1.6E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIC12D_RS05530 9204a1ab0d9c225315ac08cc97500b63 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 63 72 1.6E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIC12D_RS05530 9204a1ab0d9c225315ac08cc97500b63 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 1.6E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIC12D_RS05530 9204a1ab0d9c225315ac08cc97500b63 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 196 214 1.6E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIC12D_RS04855 36f69bce6f7834dfc4019beeceebe693 344 SUPERFAMILY SSF55120 105 333 1.6E-65 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS04855 36f69bce6f7834dfc4019beeceebe693 344 Pfam PF00849 RNA pseudouridylate synthase 117 266 9.5E-32 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS04855 36f69bce6f7834dfc4019beeceebe693 344 PANTHER PTHR11079:SF84 28 344 1.1E-120 T 22-04-2016 RPIC12D_RS04855 36f69bce6f7834dfc4019beeceebe693 344 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 156 170 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS04855 36f69bce6f7834dfc4019beeceebe693 344 Gene3D G3DSA:3.10.290.10 39 114 1.7E-4 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS04855 36f69bce6f7834dfc4019beeceebe693 344 Pfam PF01479 S4 domain 41 87 5.1E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS04855 36f69bce6f7834dfc4019beeceebe693 344 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 36 333 1.0E-82 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS04855 36f69bce6f7834dfc4019beeceebe693 344 SUPERFAMILY SSF55174 40 91 1.09E-7 T 22-04-2016 RPIC12D_RS04855 36f69bce6f7834dfc4019beeceebe693 344 SMART SM00363 41 100 1.4E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS04855 36f69bce6f7834dfc4019beeceebe693 344 PANTHER PTHR11079 28 344 1.1E-120 T 22-04-2016 RPIC12D_RS17120 de8c48b44bcb0fb3c78f76588fc264c6 262 PANTHER PTHR12110:SF12 1 259 2.3E-104 T 22-04-2016 RPIC12D_RS17120 de8c48b44bcb0fb3c78f76588fc264c6 262 Gene3D G3DSA:3.20.20.150 1 258 1.0E-91 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC12D_RS17120 de8c48b44bcb0fb3c78f76588fc264c6 262 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 3.0E-33 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC12D_RS17120 de8c48b44bcb0fb3c78f76588fc264c6 262 PANTHER PTHR12110 1 259 2.3E-104 T 22-04-2016 RPIC12D_RS17120 de8c48b44bcb0fb3c78f76588fc264c6 262 PIRSF PIRSF006241 1 261 1.8E-98 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 RPIC12D_RS17120 de8c48b44bcb0fb3c78f76588fc264c6 262 SUPERFAMILY SSF51658 1 258 3.8E-84 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC12D_RS04430 6f73b8de62335a1a638b8c59f5e93817 167 PANTHER PTHR22778:SF16 1 161 3.3E-47 T 22-04-2016 RPIC12D_RS04430 6f73b8de62335a1a638b8c59f5e93817 167 PIRSF PIRSF000194 1 164 9.4E-65 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RPIC12D_RS04430 6f73b8de62335a1a638b8c59f5e93817 167 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 15 37 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RPIC12D_RS04430 6f73b8de62335a1a638b8c59f5e93817 167 PANTHER PTHR22778 1 161 3.3E-47 T 22-04-2016 RPIC12D_RS04430 6f73b8de62335a1a638b8c59f5e93817 167 PRINTS PR00070 Dihydrofolate reductase signature 93 107 1.1E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RPIC12D_RS04430 6f73b8de62335a1a638b8c59f5e93817 167 PRINTS PR00070 Dihydrofolate reductase signature 42 53 1.1E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RPIC12D_RS04430 6f73b8de62335a1a638b8c59f5e93817 167 PRINTS PR00070 Dihydrofolate reductase signature 15 25 1.1E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RPIC12D_RS04430 6f73b8de62335a1a638b8c59f5e93817 167 PRINTS PR00070 Dihydrofolate reductase signature 29 37 1.1E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RPIC12D_RS04430 6f73b8de62335a1a638b8c59f5e93817 167 Gene3D G3DSA:3.40.430.10 2 161 2.6E-62 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain RPIC12D_RS04430 6f73b8de62335a1a638b8c59f5e93817 167 SUPERFAMILY SSF53597 3 161 6.31E-59 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain RPIC12D_RS04430 6f73b8de62335a1a638b8c59f5e93817 167 Pfam PF00186 Dihydrofolate reductase 4 161 5.4E-60 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 Pfam PF00970 Oxidoreductase FAD-binding domain 155 256 1.1E-6 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 Pfam PF00042 Globin 10 102 1.5E-7 T 22-04-2016 IPR000971 Globin GO:0019825|GO:0020037 RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 PRINTS PR00410 Phenol hydroxylase reductase family signature 267 286 1.5E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 PRINTS PR00410 Phenol hydroxylase reductase family signature 360 368 1.5E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 PRINTS PR00410 Phenol hydroxylase reductase family signature 182 194 1.5E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 360 368 2.9E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 202 209 2.9E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 231 240 2.9E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 267 286 2.9E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 182 192 2.9E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 Gene3D G3DSA:1.10.490.10 2 142 2.8E-48 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 PANTHER PTHR22924 1 396 2.9E-106 T 22-04-2016 RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 SUPERFAMILY SSF63380 149 256 3.74E-26 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 Gene3D G3DSA:3.40.50.80 263 395 2.0E-29 T 22-04-2016 RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 SUPERFAMILY SSF52343 247 390 6.42E-31 T 22-04-2016 RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 PANTHER PTHR22924:SF49 1 396 2.9E-106 T 22-04-2016 RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 SUPERFAMILY SSF46458 1 144 1.13E-37 T 22-04-2016 IPR009050 Globin-like RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 Pfam PF00175 Oxidoreductase NAD-binding domain 268 373 3.6E-11 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RPIC12D_RS16475 4fcc1d117f7f885daa4f6a495f4a7f94 401 Gene3D G3DSA:2.40.30.10 152 257 2.9E-31 T 22-04-2016 RPIC12D_RS02270 1cd236cf76dbf2e2f0586e76e8424d06 526 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 405 516 2.5E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS02270 1cd236cf76dbf2e2f0586e76e8424d06 526 Pfam PF08521 Two-component sensor kinase N-terminal 70 214 1.9E-45 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal RPIC12D_RS02270 1cd236cf76dbf2e2f0586e76e8424d06 526 SMART SM00387 402 519 8.4E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS02270 1cd236cf76dbf2e2f0586e76e8424d06 526 Gene3D G3DSA:1.10.287.130 284 341 9.3E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS02270 1cd236cf76dbf2e2f0586e76e8424d06 526 Gene3D G3DSA:3.30.565.10 342 520 2.2E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS02270 1cd236cf76dbf2e2f0586e76e8424d06 526 Pfam PF00512 His Kinase A (phospho-acceptor) domain 292 355 7.3E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS02270 1cd236cf76dbf2e2f0586e76e8424d06 526 PANTHER PTHR24423 232 494 2.0E-66 T 22-04-2016 RPIC12D_RS02270 1cd236cf76dbf2e2f0586e76e8424d06 526 PANTHER PTHR24423 4 13 2.0E-66 T 22-04-2016 RPIC12D_RS02270 1cd236cf76dbf2e2f0586e76e8424d06 526 SUPERFAMILY SSF47384 274 355 1.79E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS02270 1cd236cf76dbf2e2f0586e76e8424d06 526 Pfam PF00672 HAMP domain 224 286 7.7E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS02270 1cd236cf76dbf2e2f0586e76e8424d06 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 491 2.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS02270 1cd236cf76dbf2e2f0586e76e8424d06 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 455 2.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS02270 1cd236cf76dbf2e2f0586e76e8424d06 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 516 2.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS02270 1cd236cf76dbf2e2f0586e76e8424d06 526 PANTHER PTHR24423:SF474 232 494 2.0E-66 T 22-04-2016 RPIC12D_RS02270 1cd236cf76dbf2e2f0586e76e8424d06 526 PANTHER PTHR24423:SF474 4 13 2.0E-66 T 22-04-2016 RPIC12D_RS02270 1cd236cf76dbf2e2f0586e76e8424d06 526 SUPERFAMILY SSF55874 346 515 1.02E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS02270 1cd236cf76dbf2e2f0586e76e8424d06 526 SMART SM00388 291 356 1.5E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16405 f8a4962d6bdc44d1808076895a425c18 404 SMART SM00448 7 130 2.7E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS16405 f8a4962d6bdc44d1808076895a425c18 404 SUPERFAMILY SSF141868 165 400 4.58E-65 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS16405 f8a4962d6bdc44d1808076895a425c18 404 PANTHER PTHR33121 165 403 8.0E-55 T 22-04-2016 RPIC12D_RS16405 f8a4962d6bdc44d1808076895a425c18 404 Pfam PF00563 EAL domain 166 390 5.9E-59 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS16405 f8a4962d6bdc44d1808076895a425c18 404 Gene3D G3DSA:3.40.50.2300 6 140 4.5E-20 T 22-04-2016 RPIC12D_RS16405 f8a4962d6bdc44d1808076895a425c18 404 Gene3D G3DSA:3.20.20.450 165 400 2.3E-68 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS16405 f8a4962d6bdc44d1808076895a425c18 404 Pfam PF00072 Response regulator receiver domain 9 77 2.0E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS16405 f8a4962d6bdc44d1808076895a425c18 404 SUPERFAMILY SSF52172 7 193 2.85E-20 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS16405 f8a4962d6bdc44d1808076895a425c18 404 SMART SM00052 149 395 1.8E-65 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS16405 f8a4962d6bdc44d1808076895a425c18 404 PANTHER PTHR33121:SF13 165 403 8.0E-55 T 22-04-2016 RPIC12D_RS01695 63f32ecaefa93538a34b1b68a7070e83 305 Gene3D G3DSA:2.60.40.1400 131 301 1.6E-50 T 22-04-2016 IPR013518 Potassium channel, inwardly rectifying, Kir, cytoplasmic RPIC12D_RS01695 63f32ecaefa93538a34b1b68a7070e83 305 Pfam PF01007 Inward rectifier potassium channel 85 300 1.8E-37 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 RPIC12D_RS01695 63f32ecaefa93538a34b1b68a7070e83 305 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 240 260 7.4E-14 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 RPIC12D_RS01695 63f32ecaefa93538a34b1b68a7070e83 305 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 285 299 7.4E-14 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 RPIC12D_RS01695 63f32ecaefa93538a34b1b68a7070e83 305 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 261 278 7.4E-14 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 RPIC12D_RS01695 63f32ecaefa93538a34b1b68a7070e83 305 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 89 111 7.4E-14 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 RPIC12D_RS01695 63f32ecaefa93538a34b1b68a7070e83 305 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 209 227 7.4E-14 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 RPIC12D_RS01695 63f32ecaefa93538a34b1b68a7070e83 305 SUPERFAMILY SSF81296 121 301 2.15E-58 T 22-04-2016 IPR014756 Immunoglobulin E-set RPIC12D_RS01695 63f32ecaefa93538a34b1b68a7070e83 305 PANTHER PTHR11767:SF58 38 302 3.5E-56 T 22-04-2016 RPIC12D_RS01695 63f32ecaefa93538a34b1b68a7070e83 305 SUPERFAMILY SSF81324 37 145 4.19E-25 T 22-04-2016 RPIC12D_RS01695 63f32ecaefa93538a34b1b68a7070e83 305 PANTHER PTHR11767 38 302 3.5E-56 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 RPIC12D_RS01695 63f32ecaefa93538a34b1b68a7070e83 305 Gene3D G3DSA:1.10.287.70 36 130 1.8E-24 T 22-04-2016 RPIC12D_RS00270 7817e0cf5cd9f7f9b9b0034e71a3cd9e 388 PANTHER PTHR30294:SF12 9 385 1.6E-101 T 22-04-2016 RPIC12D_RS00270 7817e0cf5cd9f7f9b9b0034e71a3cd9e 388 PANTHER PTHR30294 9 385 1.6E-101 T 22-04-2016 RPIC12D_RS00270 7817e0cf5cd9f7f9b9b0034e71a3cd9e 388 Pfam PF12698 ABC-2 family transporter protein 30 380 2.7E-45 T 22-04-2016 RPIC12D_RS15575 f2912d2091f9f94a95922bf1a52cc649 125 Pfam PF11162 Protein of unknown function (DUF2946) 10 123 3.0E-10 T 22-04-2016 IPR021333 Protein of unknown function DUF2946 RPIC12D_RS01740 7001f78a2a7044f81ba9756d2d75087d 220 PANTHER PTHR38693:SF1 5 211 1.8E-22 T 22-04-2016 RPIC12D_RS01740 7001f78a2a7044f81ba9756d2d75087d 220 PANTHER PTHR38693 5 211 1.8E-22 T 22-04-2016 RPIC12D_RS01740 7001f78a2a7044f81ba9756d2d75087d 220 Pfam PF02036 SCP-2 sterol transfer family 24 117 1.9E-10 T 22-04-2016 IPR003033 SCP2 sterol-binding domain RPIC12D_RS10145 3c6451f0c4f5c7088f4dfae1bac4d239 300 Gene3D G3DSA:1.10.10.10 4 88 2.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS10145 3c6451f0c4f5c7088f4dfae1bac4d239 300 PANTHER PTHR30126 3 289 5.9E-104 T 22-04-2016 RPIC12D_RS10145 3c6451f0c4f5c7088f4dfae1bac4d239 300 PANTHER PTHR30126:SF4 3 289 5.9E-104 T 22-04-2016 RPIC12D_RS10145 3c6451f0c4f5c7088f4dfae1bac4d239 300 Gene3D G3DSA:3.40.190.10 92 183 9.0E-8 T 22-04-2016 RPIC12D_RS10145 3c6451f0c4f5c7088f4dfae1bac4d239 300 SUPERFAMILY SSF53850 90 290 3.08E-25 T 22-04-2016 RPIC12D_RS10145 3c6451f0c4f5c7088f4dfae1bac4d239 300 Pfam PF03466 LysR substrate binding domain 90 288 1.8E-20 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS10145 3c6451f0c4f5c7088f4dfae1bac4d239 300 SUPERFAMILY SSF46785 2 112 6.96E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS10145 3c6451f0c4f5c7088f4dfae1bac4d239 300 Gene3D G3DSA:3.40.190.10 184 255 1.7E-8 T 22-04-2016 RPIC12D_RS10145 3c6451f0c4f5c7088f4dfae1bac4d239 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.1E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06325 8915c33bf7578bb79e35aee9da5e9437 123 PANTHER PTHR30561 49 123 5.7E-16 T 22-04-2016 RPIC12D_RS06325 8915c33bf7578bb79e35aee9da5e9437 123 SUPERFAMILY SSF103481 48 122 6.54E-13 T 22-04-2016 RPIC12D_RS06325 8915c33bf7578bb79e35aee9da5e9437 123 Pfam PF00892 EamA-like transporter family 50 121 5.3E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS06325 8915c33bf7578bb79e35aee9da5e9437 123 PANTHER PTHR30561:SF9 49 123 5.7E-16 T 22-04-2016 RPIC12D_RS12150 c61d952283caf25e95efcf0e77f1c50c 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.506 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS12150 c61d952283caf25e95efcf0e77f1c50c 88 Gene3D G3DSA:1.20.58.110 1 86 3.0E-27 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS12150 c61d952283caf25e95efcf0e77f1c50c 88 SUPERFAMILY SSF46992 3 86 1.7E-26 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS12150 c61d952283caf25e95efcf0e77f1c50c 88 Pfam PF01649 Ribosomal protein S20 2 84 1.4E-24 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS12150 c61d952283caf25e95efcf0e77f1c50c 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 20 68 3.0E-5 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS12150 c61d952283caf25e95efcf0e77f1c50c 88 PANTHER PTHR33398 1 88 1.2E-27 T 22-04-2016 RPIC12D_RS12150 c61d952283caf25e95efcf0e77f1c50c 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 2.3E-23 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS11700 ed22d07ee289a222fe60223b2944dbd2 221 Pfam PF00072 Response regulator receiver domain 9 120 7.5E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS11700 ed22d07ee289a222fe60223b2944dbd2 221 SMART SM00421 155 212 4.8E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS11700 ed22d07ee289a222fe60223b2944dbd2 221 Gene3D G3DSA:1.10.10.10 157 214 6.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS11700 ed22d07ee289a222fe60223b2944dbd2 221 SUPERFAMILY SSF52172 7 124 4.55E-21 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS11700 ed22d07ee289a222fe60223b2944dbd2 221 SUPERFAMILY SSF46894 151 217 2.14E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS11700 ed22d07ee289a222fe60223b2944dbd2 221 PANTHER PTHR26402 6 209 2.8E-38 T 22-04-2016 RPIC12D_RS11700 ed22d07ee289a222fe60223b2944dbd2 221 Gene3D G3DSA:3.40.50.2300 8 131 4.1E-24 T 22-04-2016 RPIC12D_RS11700 ed22d07ee289a222fe60223b2944dbd2 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 5.0E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS11700 ed22d07ee289a222fe60223b2944dbd2 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 5.0E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS11700 ed22d07ee289a222fe60223b2944dbd2 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 5.0E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS11700 ed22d07ee289a222fe60223b2944dbd2 221 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS11700 ed22d07ee289a222fe60223b2944dbd2 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 210 7.5E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS11700 ed22d07ee289a222fe60223b2944dbd2 221 SMART SM00448 6 120 2.6E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS12860 9f14a466959d461f84a18805cfc9a275 472 Pfam PF01170 Putative RNA methylase family UPF0020 173 329 2.1E-31 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS12860 9f14a466959d461f84a18805cfc9a275 472 SUPERFAMILY SSF53335 270 330 5.43E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS12860 9f14a466959d461f84a18805cfc9a275 472 SUPERFAMILY SSF53335 387 441 5.43E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS12860 9f14a466959d461f84a18805cfc9a275 472 SUPERFAMILY SSF53335 158 230 5.43E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS12860 9f14a466959d461f84a18805cfc9a275 472 Pfam PF02926 THUMP domain 43 165 7.4E-9 T 22-04-2016 IPR004114 THUMP domain GO:0003723 RPIC12D_RS12860 9f14a466959d461f84a18805cfc9a275 472 SMART SM00981 67 165 1.5E-17 T 22-04-2016 IPR004114 THUMP domain GO:0003723 RPIC12D_RS12860 9f14a466959d461f84a18805cfc9a275 472 PANTHER PTHR14911:SF13 267 340 4.1E-38 T 22-04-2016 RPIC12D_RS12860 9f14a466959d461f84a18805cfc9a275 472 PANTHER PTHR14911:SF13 391 450 4.1E-38 T 22-04-2016 RPIC12D_RS12860 9f14a466959d461f84a18805cfc9a275 472 PANTHER PTHR14911:SF13 5 225 4.1E-38 T 22-04-2016 RPIC12D_RS12860 9f14a466959d461f84a18805cfc9a275 472 Gene3D G3DSA:3.40.50.150 383 442 4.3E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS12860 9f14a466959d461f84a18805cfc9a275 472 Gene3D G3DSA:3.40.50.150 267 327 4.3E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS12860 9f14a466959d461f84a18805cfc9a275 472 Gene3D G3DSA:3.40.50.150 158 227 4.3E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS12860 9f14a466959d461f84a18805cfc9a275 472 PANTHER PTHR14911 267 340 4.1E-38 T 22-04-2016 RPIC12D_RS12860 9f14a466959d461f84a18805cfc9a275 472 PANTHER PTHR14911 391 450 4.1E-38 T 22-04-2016 RPIC12D_RS12860 9f14a466959d461f84a18805cfc9a275 472 PANTHER PTHR14911 5 225 4.1E-38 T 22-04-2016 RPIC12D_RS13645 65d7635052cadad8eab889e4639c482a 478 SUPERFAMILY SSF63418 8 107 7.59E-24 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13645 65d7635052cadad8eab889e4639c482a 478 Pfam PF01225 Mur ligase family, catalytic domain 31 105 2.0E-11 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13645 65d7635052cadad8eab889e4639c482a 478 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 34 459 2.6E-129 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS13645 65d7635052cadad8eab889e4639c482a 478 Pfam PF08245 Mur ligase middle domain 115 307 3.0E-41 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13645 65d7635052cadad8eab889e4639c482a 478 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 8 460 32.538 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS13645 65d7635052cadad8eab889e4639c482a 478 SUPERFAMILY SSF53244 327 459 4.03E-39 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC12D_RS13645 65d7635052cadad8eab889e4639c482a 478 Gene3D G3DSA:3.40.1390.10 22 99 4.9E-25 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13645 65d7635052cadad8eab889e4639c482a 478 PANTHER PTHR23135:SF3 16 459 1.7E-146 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS13645 65d7635052cadad8eab889e4639c482a 478 Gene3D G3DSA:3.40.1190.10 100 324 5.0E-63 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13645 65d7635052cadad8eab889e4639c482a 478 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 405 1.6E-16 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC12D_RS13645 65d7635052cadad8eab889e4639c482a 478 SUPERFAMILY SSF53623 110 325 5.76E-47 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13645 65d7635052cadad8eab889e4639c482a 478 PANTHER PTHR23135 16 459 1.7E-146 T 22-04-2016 RPIC12D_RS13645 65d7635052cadad8eab889e4639c482a 478 Gene3D G3DSA:3.90.190.20 326 460 4.6E-46 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC12D_RS16490 3ed567b93a1ba2ab7e4502adf90f067b 145 Gene3D G3DSA:1.20.1290.10 1 141 8.0E-56 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS16490 3ed567b93a1ba2ab7e4502adf90f067b 145 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 30 75 6.9E-16 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS16490 3ed567b93a1ba2ab7e4502adf90f067b 145 SUPERFAMILY SSF69118 4 142 1.83E-49 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS16490 3ed567b93a1ba2ab7e4502adf90f067b 145 PANTHER PTHR34846 11 141 5.5E-15 T 22-04-2016 RPIC12D_RS16490 3ed567b93a1ba2ab7e4502adf90f067b 145 PANTHER PTHR34846:SF2 11 141 5.5E-15 T 22-04-2016 RPIC12D_RS16490 3ed567b93a1ba2ab7e4502adf90f067b 145 Pfam PF02627 Carboxymuconolactone decarboxylase family 13 94 1.1E-18 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS10785 09a249bd7da25bf41d4ee60e9264ea5f 435 Pfam PF12002 MgsA AAA+ ATPase C terminal 251 417 1.4E-65 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal RPIC12D_RS10785 09a249bd7da25bf41d4ee60e9264ea5f 435 Gene3D G3DSA:3.40.50.300 2 140 3.5E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10785 09a249bd7da25bf41d4ee60e9264ea5f 435 PANTHER PTHR13779 1 423 6.4E-179 T 22-04-2016 RPIC12D_RS10785 09a249bd7da25bf41d4ee60e9264ea5f 435 SUPERFAMILY SSF48019 235 417 7.94E-73 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RPIC12D_RS10785 09a249bd7da25bf41d4ee60e9264ea5f 435 SMART SM00382 36 152 2.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS10785 09a249bd7da25bf41d4ee60e9264ea5f 435 PANTHER PTHR13779:SF7 1 423 6.4E-179 T 22-04-2016 RPIC12D_RS10785 09a249bd7da25bf41d4ee60e9264ea5f 435 Gene3D G3DSA:1.20.272.10 232 330 3.3E-43 T 22-04-2016 RPIC12D_RS10785 09a249bd7da25bf41d4ee60e9264ea5f 435 Gene3D G3DSA:1.10.3710.10 332 428 4.1E-33 T 22-04-2016 RPIC12D_RS10785 09a249bd7da25bf41d4ee60e9264ea5f 435 Pfam PF16193 AAA C-terminal domain 171 250 1.7E-20 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain RPIC12D_RS10785 09a249bd7da25bf41d4ee60e9264ea5f 435 SUPERFAMILY SSF52540 2 217 1.33E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10785 09a249bd7da25bf41d4ee60e9264ea5f 435 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 40 146 5.1E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS10785 09a249bd7da25bf41d4ee60e9264ea5f 435 Gene3D G3DSA:1.10.8.60 141 208 8.6E-8 T 22-04-2016 RPIC12D_RS11165 cccc67500a000b7e6ee38542ebdc1310 397 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 391 1.6E-65 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 RPIC12D_RS11165 cccc67500a000b7e6ee38542ebdc1310 397 PANTHER PTHR33529:SF1 1 225 1.4E-68 T 22-04-2016 RPIC12D_RS11165 cccc67500a000b7e6ee38542ebdc1310 397 PANTHER PTHR33529:SF1 251 396 1.4E-68 T 22-04-2016 RPIC12D_RS11165 cccc67500a000b7e6ee38542ebdc1310 397 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 6 393 4.7E-98 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 RPIC12D_RS11165 cccc67500a000b7e6ee38542ebdc1310 397 PANTHER PTHR33529 1 225 1.4E-68 T 22-04-2016 RPIC12D_RS11165 cccc67500a000b7e6ee38542ebdc1310 397 PANTHER PTHR33529 251 396 1.4E-68 T 22-04-2016 RPIC12D_RS13625 6aa6603f4ff5374600240110ca2a2cd1 366 PANTHER PTHR21015 14 366 3.8E-112 T 22-04-2016 RPIC12D_RS13625 6aa6603f4ff5374600240110ca2a2cd1 366 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 15 151 1.2E-35 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC12D_RS13625 6aa6603f4ff5374600240110ca2a2cd1 366 PANTHER PTHR21015:SF22 14 366 3.8E-112 T 22-04-2016 RPIC12D_RS13625 6aa6603f4ff5374600240110ca2a2cd1 366 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 14 364 36.701 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC12D_RS13625 6aa6603f4ff5374600240110ca2a2cd1 366 SUPERFAMILY SSF53756 13 364 1.61E-122 T 22-04-2016 RPIC12D_RS13625 6aa6603f4ff5374600240110ca2a2cd1 366 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 12 359 6.9E-102 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC12D_RS13625 6aa6603f4ff5374600240110ca2a2cd1 366 Gene3D G3DSA:3.40.50.2000 12 202 1.2E-65 T 22-04-2016 RPIC12D_RS13625 6aa6603f4ff5374600240110ca2a2cd1 366 Gene3D G3DSA:3.40.50.2000 262 346 3.3E-7 T 22-04-2016 RPIC12D_RS13625 6aa6603f4ff5374600240110ca2a2cd1 366 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 191 355 9.4E-37 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC12D_RS04455 3e71b896019183a5303ead6c6655e2e1 432 PANTHER PTHR23150:SF24 193 373 8.2E-34 T 22-04-2016 RPIC12D_RS04455 3e71b896019183a5303ead6c6655e2e1 432 Gene3D G3DSA:3.90.1580.10 203 356 1.4E-39 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme RPIC12D_RS04455 3e71b896019183a5303ead6c6655e2e1 432 Gene3D G3DSA:3.90.1580.10 357 430 4.0E-8 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme RPIC12D_RS04455 3e71b896019183a5303ead6c6655e2e1 432 Pfam PF03781 Sulfatase-modifying factor enzyme 1 209 352 1.2E-28 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme RPIC12D_RS04455 3e71b896019183a5303ead6c6655e2e1 432 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 30 430 3.1E-123 T 22-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 RPIC12D_RS04455 3e71b896019183a5303ead6c6655e2e1 432 SUPERFAMILY SSF56436 211 430 2.72E-52 T 22-04-2016 IPR016187 C-type lectin fold RPIC12D_RS04455 3e71b896019183a5303ead6c6655e2e1 432 PANTHER PTHR23150 193 373 8.2E-34 T 22-04-2016 RPIC12D_RS12100 21fdccc9a6fe83f6f168601e6846d31d 163 Gene3D G3DSA:3.90.960.10 3 160 8.0E-46 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC12D_RS12100 21fdccc9a6fe83f6f168601e6846d31d 163 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 10 156 4.0E-46 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RPIC12D_RS12100 21fdccc9a6fe83f6f168601e6846d31d 163 Pfam PF04073 Aminoacyl-tRNA editing domain 38 147 2.5E-22 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC12D_RS12100 21fdccc9a6fe83f6f168601e6846d31d 163 PANTHER PTHR30411 10 154 1.4E-40 T 22-04-2016 RPIC12D_RS12100 21fdccc9a6fe83f6f168601e6846d31d 163 PIRSF PIRSF006181 5 162 3.0E-45 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RPIC12D_RS12100 21fdccc9a6fe83f6f168601e6846d31d 163 PANTHER PTHR30411:SF0 10 154 1.4E-40 T 22-04-2016 RPIC12D_RS12100 21fdccc9a6fe83f6f168601e6846d31d 163 SUPERFAMILY SSF55826 7 159 1.7E-37 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC12D_RS15840 efe43d4fe02a428a9b1cd039d8701c18 375 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 369 2.3E-114 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RPIC12D_RS15840 efe43d4fe02a428a9b1cd039d8701c18 375 Pfam PF01571 Aminomethyltransferase folate-binding domain 8 269 5.7E-82 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal RPIC12D_RS15840 efe43d4fe02a428a9b1cd039d8701c18 375 Hamap MF_00259 Aminomethyltransferase [gcvT]. 2 369 44.02 T 22-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RPIC12D_RS15840 efe43d4fe02a428a9b1cd039d8701c18 375 SUPERFAMILY SSF103025 3 285 2.24E-89 T 22-04-2016 RPIC12D_RS15840 efe43d4fe02a428a9b1cd039d8701c18 375 SUPERFAMILY SSF101790 285 371 1.47E-21 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RPIC12D_RS15840 efe43d4fe02a428a9b1cd039d8701c18 375 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 277 364 3.1E-15 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RPIC12D_RS15840 efe43d4fe02a428a9b1cd039d8701c18 375 Gene3D G3DSA:3.30.70.1400 55 139 4.3E-29 T 22-04-2016 RPIC12D_RS15840 efe43d4fe02a428a9b1cd039d8701c18 375 Gene3D G3DSA:2.40.30.110 290 371 4.0E-25 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RPIC12D_RS15840 efe43d4fe02a428a9b1cd039d8701c18 375 PANTHER PTHR13847:SF5 6 367 4.9E-57 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RPIC12D_RS15840 efe43d4fe02a428a9b1cd039d8701c18 375 PIRSF PIRSF006487 1 373 7.9E-78 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RPIC12D_RS15840 efe43d4fe02a428a9b1cd039d8701c18 375 Gene3D G3DSA:3.30.1360.120 3 54 1.7E-50 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RPIC12D_RS15840 efe43d4fe02a428a9b1cd039d8701c18 375 Gene3D G3DSA:3.30.1360.120 155 246 1.7E-50 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RPIC12D_RS15840 efe43d4fe02a428a9b1cd039d8701c18 375 PANTHER PTHR13847 6 367 4.9E-57 T 22-04-2016 RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 Gene3D G3DSA:2.40.37.10 266 416 1.7E-49 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 Gene3D G3DSA:3.20.20.10 37 265 2.3E-79 T 22-04-2016 IPR029066 PLP-binding barrel RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 SUPERFAMILY SSF51419 27 286 1.57E-81 T 22-04-2016 IPR029066 PLP-binding barrel RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 40 284 5.3E-70 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 414 4.8E-162 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 289 392 4.6E-18 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 372 385 2.6E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 2.6E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 2.6E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 274 293 2.6E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 2.6E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 415 41.776 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 302 320 2.7E-27 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 2.7E-27 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 2.7E-27 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 382 404 2.7E-27 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 SUPERFAMILY SSF50621 264 416 6.07E-53 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 PANTHER PTHR11482:SF5 7 418 1.9E-170 T 22-04-2016 RPIC12D_RS14560 a4587a3aef9c3f3f8fa939cd2e7b1bad 419 PANTHER PTHR11482 7 418 1.9E-170 T 22-04-2016 RPIC12D_RS00265 97e378954296177ea0d0879cd1b78ffb 326 PANTHER PTHR24220:SF0 23 260 1.3E-99 T 22-04-2016 RPIC12D_RS00265 97e378954296177ea0d0879cd1b78ffb 326 SMART SM00382 46 243 4.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS00265 97e378954296177ea0d0879cd1b78ffb 326 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS00265 97e378954296177ea0d0879cd1b78ffb 326 SUPERFAMILY SSF52540 13 240 6.69E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS00265 97e378954296177ea0d0879cd1b78ffb 326 Gene3D G3DSA:3.40.50.300 13 241 2.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS00265 97e378954296177ea0d0879cd1b78ffb 326 PANTHER PTHR24220 23 260 1.3E-99 T 22-04-2016 RPIC12D_RS00265 97e378954296177ea0d0879cd1b78ffb 326 Pfam PF00005 ABC transporter 38 179 6.7E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 SUPERFAMILY SSF158832 6 329 1.96E-116 T 22-04-2016 RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 Gene3D G3DSA:1.10.150.310 508 639 3.7E-45 T 22-04-2016 IPR023097 Tex RuvX-like domain RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 PANTHER PTHR10724:SF1 7 771 0.0 T 22-04-2016 RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 Pfam PF12836 Helix-hairpin-helix motif 500 564 3.7E-28 T 22-04-2016 RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 SMART SM00316 658 729 5.5E-24 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 Gene3D G3DSA:1.10.10.650 5 113 5.9E-47 T 22-04-2016 IPR023319 Tex-like protein, HTH domain RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 Gene3D G3DSA:3.30.420.140 334 459 1.2E-52 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 PANTHER PTHR10724 7 771 0.0 T 22-04-2016 RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 SUPERFAMILY SSF53098 330 478 5.54E-51 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 Pfam PF00575 S1 RNA binding domain 658 729 6.4E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 Gene3D G3DSA:1.10.3500.10 460 507 1.4E-99 T 22-04-2016 IPR023323 Tex-like domain RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 Gene3D G3DSA:1.10.3500.10 114 330 1.4E-99 T 22-04-2016 IPR023323 Tex-like domain RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 SUPERFAMILY SSF47781 479 567 9.64E-29 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 Pfam PF09371 Tex-like protein N-terminal domain 13 201 1.3E-70 T 22-04-2016 IPR018974 Tex-like protein, N-terminal RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 SUPERFAMILY SSF50249 646 733 2.01E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 Pfam PF16921 Tex protein YqgF-like domain 334 460 1.9E-53 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 SMART SM00732 334 433 1.2E-34 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 Gene3D G3DSA:2.40.50.140 642 731 2.4E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS08015 6254804532a85c1a9b68e4c9176df2e4 777 SUPERFAMILY SSF47781 569 641 1.2E-18 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RPIC12D_RS16790 ca3b7d01c75f0607184e7782dc103815 237 SUPERFAMILY SSF46689 174 226 1.21E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS16790 ca3b7d01c75f0607184e7782dc103815 237 Pfam PF00072 Response regulator receiver domain 4 115 3.0E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS16790 ca3b7d01c75f0607184e7782dc103815 237 Gene3D G3DSA:3.40.50.2300 1 126 1.2E-34 T 22-04-2016 RPIC12D_RS16790 ca3b7d01c75f0607184e7782dc103815 237 PANTHER PTHR32071:SF17 4 118 1.5E-37 T 22-04-2016 RPIC12D_RS16790 ca3b7d01c75f0607184e7782dc103815 237 SUPERFAMILY SSF52172 1 128 1.42E-36 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS16790 ca3b7d01c75f0607184e7782dc103815 237 PANTHER PTHR32071 4 118 1.5E-37 T 22-04-2016 RPIC12D_RS16790 ca3b7d01c75f0607184e7782dc103815 237 Pfam PF02954 Bacterial regulatory protein, Fis family 185 224 4.1E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS16790 ca3b7d01c75f0607184e7782dc103815 237 SMART SM00448 2 114 3.1E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS16790 ca3b7d01c75f0607184e7782dc103815 237 Gene3D G3DSA:1.10.10.60 179 226 4.6E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS03415 e17e7721030905fe41cb13142d0bd754 164 PANTHER PTHR30471:SF5 27 164 6.3E-61 T 22-04-2016 RPIC12D_RS03415 e17e7721030905fe41cb13142d0bd754 164 Gene3D G3DSA:3.40.140.10 41 164 1.1E-44 T 22-04-2016 RPIC12D_RS03415 e17e7721030905fe41cb13142d0bd754 164 PANTHER PTHR30471 27 164 6.3E-61 T 22-04-2016 RPIC12D_RS03415 e17e7721030905fe41cb13142d0bd754 164 TIGRFAM TIGR00608 radc: DNA repair protein RadC 27 164 1.5E-40 T 22-04-2016 IPR001405 RadC protein RPIC12D_RS03415 e17e7721030905fe41cb13142d0bd754 164 Pfam PF04002 RadC-like JAB domain 43 162 3.3E-39 T 22-04-2016 IPR025657 RadC-like JAB domain RPIC12D_RS08295 6fcc9214508a3b4d4341ed6baa4366a8 741 PANTHER PTHR21262:SF5 41 741 7.3E-271 T 22-04-2016 RPIC12D_RS08295 6fcc9214508a3b4d4341ed6baa4366a8 741 PANTHER PTHR21262 41 741 7.3E-271 T 22-04-2016 RPIC12D_RS08295 6fcc9214508a3b4d4341ed6baa4366a8 741 Pfam PF04607 Region found in RelA / SpoT proteins 248 358 4.6E-38 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 RPIC12D_RS08295 6fcc9214508a3b4d4341ed6baa4366a8 741 Pfam PF02824 TGS domain 412 471 1.6E-20 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 RPIC12D_RS08295 6fcc9214508a3b4d4341ed6baa4366a8 741 SUPERFAMILY SSF81271 403 471 7.19E-20 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RPIC12D_RS08295 6fcc9214508a3b4d4341ed6baa4366a8 741 SMART SM00954 248 358 1.3E-65 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 RPIC12D_RS08295 6fcc9214508a3b4d4341ed6baa4366a8 741 Gene3D G3DSA:3.30.460.10 191 338 6.2E-51 T 22-04-2016 RPIC12D_RS08295 6fcc9214508a3b4d4341ed6baa4366a8 741 Pfam PF13291 ACT domain 665 740 6.4E-16 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RPIC12D_RS08295 6fcc9214508a3b4d4341ed6baa4366a8 741 Gene3D G3DSA:3.10.20.30 412 473 8.4E-22 T 22-04-2016 IPR012675 Beta-grasp domain RPIC12D_RS08295 6fcc9214508a3b4d4341ed6baa4366a8 741 SUPERFAMILY SSF81301 205 385 1.96E-63 T 22-04-2016 RPIC12D_RS08295 6fcc9214508a3b4d4341ed6baa4366a8 741 SUPERFAMILY SSF55021 664 740 1.57E-13 T 22-04-2016 RPIC12D_RS08295 6fcc9214508a3b4d4341ed6baa4366a8 741 Gene3D G3DSA:3.30.70.260 667 738 3.4E-16 T 22-04-2016 RPIC12D_RS08295 6fcc9214508a3b4d4341ed6baa4366a8 741 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 36 739 3.8E-174 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 RPIC12D_RS08295 6fcc9214508a3b4d4341ed6baa4366a8 741 Pfam PF13328 HD domain 22 189 3.9E-47 T 22-04-2016 IPR003607 HD/PDEase domain RPIC12D_RS08295 6fcc9214508a3b4d4341ed6baa4366a8 741 SUPERFAMILY SSF109604 15 202 3.14E-40 T 22-04-2016 RPIC12D_RS02505 0e8755b1a7e0b113591b01a6ad2475b1 377 PANTHER PTHR30483 1 376 1.1E-129 T 22-04-2016 RPIC12D_RS02505 0e8755b1a7e0b113591b01a6ad2475b1 377 SUPERFAMILY SSF53822 22 376 5.3E-64 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS02505 0e8755b1a7e0b113591b01a6ad2475b1 377 Gene3D G3DSA:3.40.50.2300 22 212 3.3E-38 T 22-04-2016 RPIC12D_RS02505 0e8755b1a7e0b113591b01a6ad2475b1 377 Pfam PF13458 Periplasmic binding protein 23 357 4.3E-42 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC12D_RS02505 0e8755b1a7e0b113591b01a6ad2475b1 377 PANTHER PTHR30483:SF7 1 376 1.1E-129 T 22-04-2016 RPIC12D_RS13580 d7f2cf27538ad653f08eca448c6dcad1 320 SUPERFAMILY SSF51261 154 289 3.14E-56 T 22-04-2016 IPR011055 Duplicated hybrid motif RPIC12D_RS13580 d7f2cf27538ad653f08eca448c6dcad1 320 PANTHER PTHR21666 175 289 1.0E-45 T 22-04-2016 RPIC12D_RS13580 d7f2cf27538ad653f08eca448c6dcad1 320 Pfam PF01551 Peptidase family M23 191 285 2.2E-31 T 22-04-2016 IPR016047 Peptidase M23 RPIC12D_RS13580 d7f2cf27538ad653f08eca448c6dcad1 320 Gene3D G3DSA:2.70.70.10 155 290 8.5E-47 T 22-04-2016 RPIC12D_RS16035 744e3bf0d2d17a8100d07b5744f635cf 382 Pfam PF13458 Periplasmic binding protein 24 377 1.2E-55 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC12D_RS16035 744e3bf0d2d17a8100d07b5744f635cf 382 PANTHER PTHR30483 9 380 3.2E-142 T 22-04-2016 RPIC12D_RS16035 744e3bf0d2d17a8100d07b5744f635cf 382 Gene3D G3DSA:3.40.50.2300 24 218 4.1E-48 T 22-04-2016 RPIC12D_RS16035 744e3bf0d2d17a8100d07b5744f635cf 382 SUPERFAMILY SSF53822 25 380 4.12E-79 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS16035 744e3bf0d2d17a8100d07b5744f635cf 382 PANTHER PTHR30483:SF7 9 380 3.2E-142 T 22-04-2016 RPIC12D_RS14755 855c0ddd778a3d8a5f09a91ab12f8d96 206 PANTHER PTHR10746 7 205 2.1E-70 T 22-04-2016 IPR013005 50S ribosomal protein uL4 RPIC12D_RS14755 855c0ddd778a3d8a5f09a91ab12f8d96 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 203 3.5E-68 T 22-04-2016 IPR013005 50S ribosomal protein uL4 RPIC12D_RS14755 855c0ddd778a3d8a5f09a91ab12f8d96 206 Gene3D G3DSA:3.40.1370.10 58 205 1.9E-51 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14755 855c0ddd778a3d8a5f09a91ab12f8d96 206 SUPERFAMILY SSF52166 1 205 2.88E-66 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14755 855c0ddd778a3d8a5f09a91ab12f8d96 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 30.802 T 22-04-2016 IPR013005 50S ribosomal protein uL4 RPIC12D_RS14755 855c0ddd778a3d8a5f09a91ab12f8d96 206 Pfam PF00573 Ribosomal protein L4/L1 family 18 203 3.9E-60 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS03700 1b2715d498b0cc33673a1ba69642ef50 285 Pfam PF13276 HTH-like domain 28 85 2.3E-17 T 22-04-2016 IPR025948 HTH-like domain RPIC12D_RS03700 1b2715d498b0cc33673a1ba69642ef50 285 PANTHER PTHR32552 1 279 9.3E-70 T 22-04-2016 RPIC12D_RS03700 1b2715d498b0cc33673a1ba69642ef50 285 Pfam PF00665 Integrase core domain 109 225 3.0E-28 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC12D_RS03700 1b2715d498b0cc33673a1ba69642ef50 285 SUPERFAMILY SSF53098 103 267 2.58E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS03700 1b2715d498b0cc33673a1ba69642ef50 285 Gene3D G3DSA:3.30.420.10 103 265 8.2E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 Pfam PF03979 Sigma-70 factor, region 1.1 203 282 7.6E-27 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 SUPERFAMILY SSF88659 716 817 4.3E-27 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 Gene3D G3DSA:1.10.10.10 750 819 7.6E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 Pfam PF04546 Sigma-70, non-essential region 340 555 7.7E-67 T 22-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 Gene3D G3DSA:1.10.10.10 659 710 6.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 Pfam PF04542 Sigma-70 region 2 588 655 9.5E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 Pfam PF04539 Sigma-70 region 3 665 741 2.9E-25 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 610 623 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 SUPERFAMILY SSF88659 659 732 1.45E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 PRINTS PR00046 Major sigma-70 factor signature 610 623 1.1E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 PRINTS PR00046 Major sigma-70 factor signature 794 805 1.1E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 PRINTS PR00046 Major sigma-70 factor signature 758 770 1.1E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 PRINTS PR00046 Major sigma-70 factor signature 779 794 1.1E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 PRINTS PR00046 Major sigma-70 factor signature 634 642 1.1E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 PANTHER PTHR30603:SF0 533 819 4.2E-221 T 22-04-2016 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 582 807 1.9E-38 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 180 819 42.467 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 Gene3D G3DSA:1.10.601.10 313 655 2.1E-129 T 22-04-2016 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 PANTHER PTHR30603 533 819 4.2E-221 T 22-04-2016 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 PANTHER PTHR30603 197 353 4.2E-221 T 22-04-2016 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 Pfam PF00140 Sigma-70 factor, region 1.2 299 331 9.0E-13 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 SUPERFAMILY SSF88946 316 653 3.53E-101 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 Pfam PF04545 Sigma-70, region 4 754 807 3.9E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 779 805 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 582 818 1.6E-118 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10210 2f637a7309286ace0882e7187b28ae90 821 PANTHER PTHR30603:SF0 197 353 4.2E-221 T 22-04-2016 RPIC12D_RS03130 ae36cea33d09f276bf9b2d9c0568b624 426 PANTHER PTHR11638 101 426 9.5E-188 T 22-04-2016 RPIC12D_RS03130 ae36cea33d09f276bf9b2d9c0568b624 426 SUPERFAMILY SSF81923 112 249 1.18E-24 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC12D_RS03130 ae36cea33d09f276bf9b2d9c0568b624 426 PANTHER PTHR11638:SF80 101 426 9.5E-188 T 22-04-2016 RPIC12D_RS03130 ae36cea33d09f276bf9b2d9c0568b624 426 SUPERFAMILY SSF52540 263 425 7.68E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03130 ae36cea33d09f276bf9b2d9c0568b624 426 SMART SM00382 302 420 7.0E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS03130 ae36cea33d09f276bf9b2d9c0568b624 426 Gene3D G3DSA:1.10.1780.10 111 248 1.5E-35 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC12D_RS03130 ae36cea33d09f276bf9b2d9c0568b624 426 Gene3D G3DSA:3.40.50.300 263 425 1.3E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03130 ae36cea33d09f276bf9b2d9c0568b624 426 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 123 171 1.1E-7 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC12D_RS03130 ae36cea33d09f276bf9b2d9c0568b624 426 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 199 248 7.3E-16 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC12D_RS03130 ae36cea33d09f276bf9b2d9c0568b624 426 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 307 421 3.3E-15 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS13190 ef50f55276444c3d65f1f419c085ffb2 280 PANTHER PTHR22911:SF37 1 276 1.0E-75 T 22-04-2016 RPIC12D_RS13190 ef50f55276444c3d65f1f419c085ffb2 280 SUPERFAMILY SSF103481 172 268 1.83E-9 T 22-04-2016 RPIC12D_RS13190 ef50f55276444c3d65f1f419c085ffb2 280 PANTHER PTHR22911 1 276 1.0E-75 T 22-04-2016 RPIC12D_RS13190 ef50f55276444c3d65f1f419c085ffb2 280 SUPERFAMILY SSF103481 35 128 8.5E-6 T 22-04-2016 RPIC12D_RS13190 ef50f55276444c3d65f1f419c085ffb2 280 Pfam PF00892 EamA-like transporter family 137 266 1.5E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS03685 6a2aa3ecf7745c79ad3cc588978a5f18 431 PANTHER PTHR33498:SF1 1 426 1.0E-49 T 22-04-2016 RPIC12D_RS03685 6a2aa3ecf7745c79ad3cc588978a5f18 431 PANTHER PTHR33498 1 426 1.0E-49 T 22-04-2016 RPIC12D_RS03685 6a2aa3ecf7745c79ad3cc588978a5f18 431 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 95 144 7.5E-12 T 22-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain RPIC12D_RS03685 6a2aa3ecf7745c79ad3cc588978a5f18 431 Pfam PF01610 Transposase 159 409 1.9E-70 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RPIC12D_RS03685 6a2aa3ecf7745c79ad3cc588978a5f18 431 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 45 88 1.9E-11 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 PANTHER PTHR23115 1 395 2.1E-264 T 22-04-2016 RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 7.4E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 9.0E-59 T 22-04-2016 RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 SUPERFAMILY SSF50447 207 303 1.47E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 3.6E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 Gene3D G3DSA:3.40.50.300 4 213 5.4E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 Gene3D G3DSA:2.40.30.10 214 300 1.2E-36 T 22-04-2016 RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 2.8E-229 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 PANTHER PTHR23115:SF151 1 395 2.1E-264 T 22-04-2016 RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 4.2E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 Gene3D G3DSA:2.40.30.10 302 395 2.3E-46 T 22-04-2016 RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.252 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 8.8E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 8.8E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 8.8E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 8.8E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 8.8E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 SUPERFAMILY SSF52540 6 221 2.17E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14885 db02db681db4b2a76c9838c6760edad3 396 SUPERFAMILY SSF50465 304 396 3.6E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 Pfam PF08529 NusA N-terminal domain 4 127 6.9E-37 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 Pfam PF13184 NusA-like KH domain 232 299 1.8E-23 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 SUPERFAMILY SSF47794 358 418 4.71E-16 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 SUPERFAMILY SSF47794 429 490 1.16E-14 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 SMART SM00322 303 381 0.0071 T 22-04-2016 IPR004087 K Homology domain GO:0003676 RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 SUPERFAMILY SSF54814 281 343 3.47E-15 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 343 1.9E-122 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 Gene3D G3DSA:3.30.300.20 201 279 1.1E-30 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 SUPERFAMILY SSF50249 135 201 2.31E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 SUPERFAMILY SSF69705 1 129 1.16E-39 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 Pfam PF14520 Helix-hairpin-helix domain 432 487 6.0E-10 T 22-04-2016 RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 PANTHER PTHR22648:SF0 1 448 1.4E-158 T 22-04-2016 RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 Pfam PF00575 S1 RNA binding domain 139 198 4.8E-8 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 Gene3D G3DSA:3.30.1480.10 1 128 5.4E-44 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 SMART SM00316 136 202 7.9E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 Gene3D G3DSA:3.30.300.20 280 348 9.3E-29 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 443 489 7.6E-15 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 367 415 1.6E-19 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 PANTHER PTHR22648 1 448 1.4E-158 T 22-04-2016 RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 SUPERFAMILY SSF54814 202 280 4.38E-27 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 Gene3D G3DSA:2.40.50.140 139 200 3.5E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 Gene3D G3DSA:1.10.150.20 357 422 2.6E-23 T 22-04-2016 RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 Gene3D G3DSA:1.10.150.20 429 490 2.7E-23 T 22-04-2016 RPIC12D_RS06080 848bcc3bbfd6861623ec109523157b0f 491 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 412 29.172 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 RPIC12D_RS11265 cd2e3704abd007176690ef06774dbca4 373 Pfam PF01757 Acyltransferase family 14 346 3.0E-23 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 RPIC12D_RS03175 59f9b70c07da804eb06c64180dcf26cf 559 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 28 294 3.1E-118 T 22-04-2016 IPR022304 Integrating conjugative element, PFGI-1, ParB RPIC12D_RS03175 59f9b70c07da804eb06c64180dcf26cf 559 Gene3D G3DSA:3.90.1530.10 37 125 2.7E-7 T 22-04-2016 RPIC12D_RS03175 59f9b70c07da804eb06c64180dcf26cf 559 SUPERFAMILY SSF110849 37 159 6.8E-10 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC12D_RS25610 e6d7ace21729ecd6ac6b578b7d1e357b 297 SUPERFAMILY SSF53383 112 297 6.93E-49 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS25610 e6d7ace21729ecd6ac6b578b7d1e357b 297 Pfam PF00202 Aminotransferase class-III 117 281 2.6E-41 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS25610 e6d7ace21729ecd6ac6b578b7d1e357b 297 Gene3D G3DSA:3.90.1150.10 118 167 2.0E-16 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS25610 e6d7ace21729ecd6ac6b578b7d1e357b 297 Gene3D G3DSA:3.40.640.10 168 297 3.3E-32 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS25610 e6d7ace21729ecd6ac6b578b7d1e357b 297 PANTHER PTHR11986 36 297 3.2E-92 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS25610 e6d7ace21729ecd6ac6b578b7d1e357b 297 PANTHER PTHR11986:SF18 36 297 3.2E-92 T 22-04-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC12D_RS11695 858f9a635de810bf9b7023926fb6fd77 216 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.176 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 RPIC12D_RS11695 858f9a635de810bf9b7023926fb6fd77 216 PANTHER PTHR10520 1 194 1.2E-95 T 22-04-2016 RPIC12D_RS11695 858f9a635de810bf9b7023926fb6fd77 216 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS11695 858f9a635de810bf9b7023926fb6fd77 216 Gene3D G3DSA:3.40.50.170 1 193 2.5E-68 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS11695 858f9a635de810bf9b7023926fb6fd77 216 Pfam PF00551 Formyl transferase 2 182 8.2E-57 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS11695 858f9a635de810bf9b7023926fb6fd77 216 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 9.0E-72 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 RPIC12D_RS11695 858f9a635de810bf9b7023926fb6fd77 216 SUPERFAMILY SSF53328 2 194 2.22E-64 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS24940 598ca0223394bdfee59c6ac784e38648 273 PANTHER PTHR32248 78 266 3.7E-42 T 22-04-2016 RPIC12D_RS24940 598ca0223394bdfee59c6ac784e38648 273 PANTHER PTHR32248 1 58 3.7E-42 T 22-04-2016 RPIC12D_RS24940 598ca0223394bdfee59c6ac784e38648 273 Pfam PF04963 Sigma-54 factor, core binding domain 137 272 2.2E-34 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 RPIC12D_RS24940 598ca0223394bdfee59c6ac784e38648 273 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 1 44 2.1E-16 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS03070 92c41aa43fca0f5717473dcdaed7a145 571 Pfam PF02254 TrkA-N domain 411 517 2.6E-17 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RPIC12D_RS03070 92c41aa43fca0f5717473dcdaed7a145 571 Pfam PF00999 Sodium/hydrogen exchanger family 9 372 1.4E-59 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RPIC12D_RS03070 92c41aa43fca0f5717473dcdaed7a145 571 SUPERFAMILY SSF51735 407 545 7.42E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS03070 92c41aa43fca0f5717473dcdaed7a145 571 PANTHER PTHR16254 3 565 8.6E-113 T 22-04-2016 RPIC12D_RS03070 92c41aa43fca0f5717473dcdaed7a145 571 Gene3D G3DSA:3.40.50.720 408 544 1.2E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS00330 bf23db4cb9299da849211b8c73333286 455 PANTHER PTHR22572:SF115 2 445 1.7E-205 T 22-04-2016 RPIC12D_RS00330 bf23db4cb9299da849211b8c73333286 455 SUPERFAMILY SSF53448 2 248 1.03E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS00330 bf23db4cb9299da849211b8c73333286 455 SUPERFAMILY SSF51161 250 434 2.76E-49 T 22-04-2016 IPR011004 Trimeric LpxA-like RPIC12D_RS00330 bf23db4cb9299da849211b8c73333286 455 Gene3D G3DSA:3.90.550.10 2 238 1.3E-71 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS00330 bf23db4cb9299da849211b8c73333286 455 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 2 450 2.7E-189 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 RPIC12D_RS00330 bf23db4cb9299da849211b8c73333286 455 PANTHER PTHR22572 2 445 1.7E-205 T 22-04-2016 RPIC12D_RS00330 bf23db4cb9299da849211b8c73333286 455 Pfam PF12804 MobA-like NTP transferase domain 4 127 9.1E-22 T 22-04-2016 IPR025877 MobA-like NTP transferase RPIC12D_RS00330 bf23db4cb9299da849211b8c73333286 455 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 448 41.168 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 RPIC12D_RS00330 bf23db4cb9299da849211b8c73333286 455 Gene3D G3DSA:2.160.10.10 239 319 5.5E-17 T 22-04-2016 RPIC12D_RS00330 bf23db4cb9299da849211b8c73333286 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 347 3.4E-5 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC12D_RS00330 bf23db4cb9299da849211b8c73333286 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 391 425 3.6E-6 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC12D_RS00330 bf23db4cb9299da849211b8c73333286 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 263 295 4.1E-5 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC12D_RS00330 bf23db4cb9299da849211b8c73333286 455 Gene3D G3DSA:2.160.10.10 320 452 1.6E-32 T 22-04-2016 RPIC12D_RS01385 a8dbbf5782f2a51a1d44e44599e1f150 289 Gene3D G3DSA:3.30.230.10 12 163 1.9E-55 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC12D_RS01385 a8dbbf5782f2a51a1d44e44599e1f150 289 PANTHER PTHR20861:SF2 12 274 3.2E-85 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS01385 a8dbbf5782f2a51a1d44e44599e1f150 289 Gene3D G3DSA:3.30.70.890 165 287 4.8E-40 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain RPIC12D_RS01385 a8dbbf5782f2a51a1d44e44599e1f150 289 PANTHER PTHR20861 12 274 3.2E-85 T 22-04-2016 RPIC12D_RS01385 a8dbbf5782f2a51a1d44e44599e1f150 289 Pfam PF08544 GHMP kinases C terminal 219 272 3.9E-5 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain RPIC12D_RS01385 a8dbbf5782f2a51a1d44e44599e1f150 289 SUPERFAMILY SSF54211 12 162 6.75E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS01385 a8dbbf5782f2a51a1d44e44599e1f150 289 PIRSF PIRSF010376 8 288 4.6E-89 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS01385 a8dbbf5782f2a51a1d44e44599e1f150 289 SUPERFAMILY SSF55060 165 286 2.69E-32 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain RPIC12D_RS01385 a8dbbf5782f2a51a1d44e44599e1f150 289 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 9 281 33.04 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS01385 a8dbbf5782f2a51a1d44e44599e1f150 289 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 11 285 2.1E-74 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS01385 a8dbbf5782f2a51a1d44e44599e1f150 289 Pfam PF00288 GHMP kinases N terminal domain 91 148 3.4E-11 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 RPIC12D_RS09150 d00da1af042bef5c1b83156c278e8939 367 PANTHER PTHR10174:SF116 200 367 3.4E-132 T 22-04-2016 RPIC12D_RS09150 d00da1af042bef5c1b83156c278e8939 367 PANTHER PTHR10174:SF116 102 178 3.4E-132 T 22-04-2016 RPIC12D_RS09150 d00da1af042bef5c1b83156c278e8939 367 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 121 4.9E-26 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RPIC12D_RS09150 d00da1af042bef5c1b83156c278e8939 367 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 259 273 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RPIC12D_RS09150 d00da1af042bef5c1b83156c278e8939 367 PANTHER PTHR10174 200 367 3.4E-132 T 22-04-2016 RPIC12D_RS09150 d00da1af042bef5c1b83156c278e8939 367 PANTHER PTHR10174 102 178 3.4E-132 T 22-04-2016 RPIC12D_RS09150 d00da1af042bef5c1b83156c278e8939 367 SMART SM00859 2 121 1.8E-27 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RPIC12D_RS09150 d00da1af042bef5c1b83156c278e8939 367 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 351 1.1E-47 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS09150 d00da1af042bef5c1b83156c278e8939 367 Gene3D G3DSA:3.30.360.10 142 348 3.2E-68 T 22-04-2016 RPIC12D_RS09150 d00da1af042bef5c1b83156c278e8939 367 SUPERFAMILY SSF55347 133 352 1.44E-69 T 22-04-2016 RPIC12D_RS09150 d00da1af042bef5c1b83156c278e8939 367 SUPERFAMILY SSF51735 1 146 3.0E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS09150 d00da1af042bef5c1b83156c278e8939 367 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 365 6.0E-215 T 22-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RPIC12D_RS09150 d00da1af042bef5c1b83156c278e8939 367 PIRSF PIRSF000148 1 367 2.6E-62 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RPIC12D_RS09150 d00da1af042bef5c1b83156c278e8939 367 Gene3D G3DSA:3.40.50.720 1 141 7.3E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS04660 5b5099bd788cd0cef2362e3552ed31e1 311 SUPERFAMILY SSF103481 208 299 1.7E-15 T 22-04-2016 RPIC12D_RS04660 5b5099bd788cd0cef2362e3552ed31e1 311 PANTHER PTHR22911 1 310 1.4E-47 T 22-04-2016 RPIC12D_RS04660 5b5099bd788cd0cef2362e3552ed31e1 311 PANTHER PTHR22911:SF23 1 310 1.4E-47 T 22-04-2016 RPIC12D_RS04660 5b5099bd788cd0cef2362e3552ed31e1 311 Pfam PF00892 EamA-like transporter family 18 151 1.6E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS04660 5b5099bd788cd0cef2362e3552ed31e1 311 Pfam PF00892 EamA-like transporter family 162 296 1.5E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS04660 5b5099bd788cd0cef2362e3552ed31e1 311 SUPERFAMILY SSF103481 58 151 2.62E-15 T 22-04-2016 RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 634 743 7.7E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 SUPERFAMILY SSF55874 592 745 5.5E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 Pfam PF08446 PAS fold 25 123 4.2E-16 T 22-04-2016 IPR013654 PAS fold-2 GO:0006355 RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 PRINTS PR00344 Bacterial sensor protein C-terminal signature 729 742 1.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 PRINTS PR00344 Bacterial sensor protein C-terminal signature 672 686 1.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 PRINTS PR00344 Bacterial sensor protein C-terminal signature 705 723 1.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 SUPERFAMILY SSF47384 510 592 1.55E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 Pfam PF00360 Phytochrome region 330 508 1.1E-45 T 22-04-2016 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 SMART SM00388 524 592 2.9E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 SMART SM00387 633 745 5.9E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 Gene3D G3DSA:3.30.450.40 144 315 2.8E-9 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 SMART SM00065 150 328 6.9E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 Gene3D G3DSA:3.30.565.10 593 746 2.8E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 PANTHER PTHR24423 102 744 1.5E-100 T 22-04-2016 RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 SUPERFAMILY SSF55781 326 510 4.61E-45 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 SUPERFAMILY SSF55785 25 123 3.98E-19 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 SUPERFAMILY SSF55781 134 319 1.29E-42 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 PANTHER PTHR24423:SF518 102 744 1.5E-100 T 22-04-2016 RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 Pfam PF01590 GAF domain 151 315 1.0E-13 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 Gene3D G3DSA:1.10.287.130 516 587 4.2E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS13985 d8196b9d5ef7ad0e70914040a6af58e6 763 Pfam PF00512 His Kinase A (phospho-acceptor) domain 526 592 2.7E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS01270 573d6a38a20bd01b6233c6115ab5df2d 267 PANTHER PTHR24220:SF361 7 260 8.5E-116 T 22-04-2016 RPIC12D_RS01270 573d6a38a20bd01b6233c6115ab5df2d 267 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 255 2.0E-103 T 22-04-2016 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 RPIC12D_RS01270 573d6a38a20bd01b6233c6115ab5df2d 267 SMART SM00382 34 217 1.3E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS01270 573d6a38a20bd01b6233c6115ab5df2d 267 Pfam PF00005 ABC transporter 25 167 6.4E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS01270 573d6a38a20bd01b6233c6115ab5df2d 267 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS01270 573d6a38a20bd01b6233c6115ab5df2d 267 PANTHER PTHR24220 7 260 8.5E-116 T 22-04-2016 RPIC12D_RS01270 573d6a38a20bd01b6233c6115ab5df2d 267 SUPERFAMILY SSF52540 6 233 1.39E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01270 573d6a38a20bd01b6233c6115ab5df2d 267 Gene3D G3DSA:3.40.50.300 5 223 5.9E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08720 1a22ef56fedbff1e4d37f5129495ed5e 279 PANTHER PTHR11935 12 278 1.5E-84 T 22-04-2016 RPIC12D_RS08720 1a22ef56fedbff1e4d37f5129495ed5e 279 PIRSF PIRSF005457 8 278 2.4E-97 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC12D_RS08720 1a22ef56fedbff1e4d37f5129495ed5e 279 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 15 278 6.7E-97 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC12D_RS08720 1a22ef56fedbff1e4d37f5129495ed5e 279 PANTHER PTHR11935:SF7 12 278 1.5E-84 T 22-04-2016 RPIC12D_RS08720 1a22ef56fedbff1e4d37f5129495ed5e 279 SMART SM00849 22 190 1.9E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS08720 1a22ef56fedbff1e4d37f5129495ed5e 279 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 191 278 6.0E-28 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC12D_RS08720 1a22ef56fedbff1e4d37f5129495ed5e 279 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 12 278 43.153 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC12D_RS08720 1a22ef56fedbff1e4d37f5129495ed5e 279 SUPERFAMILY SSF56281 12 278 1.96E-69 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS08720 1a22ef56fedbff1e4d37f5129495ed5e 279 Gene3D G3DSA:3.60.15.10 14 278 3.0E-87 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS08720 1a22ef56fedbff1e4d37f5129495ed5e 279 Pfam PF00753 Metallo-beta-lactamase superfamily 25 190 2.8E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS05415 ccbb3193d4427640cfd081e6513dbbd1 221 PANTHER PTHR22939 35 202 1.9E-37 T 22-04-2016 RPIC12D_RS05415 ccbb3193d4427640cfd081e6513dbbd1 221 PANTHER PTHR22939:SF104 35 202 1.9E-37 T 22-04-2016 RPIC12D_RS15155 4f572dc8d6e6316d4bcc3173df8e2877 298 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 221 293 6.5E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS15155 4f572dc8d6e6316d4bcc3173df8e2877 298 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 81 156 4.6E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS15155 4f572dc8d6e6316d4bcc3173df8e2877 298 PANTHER PTHR40942 184 298 5.8E-25 T 22-04-2016 RPIC12D_RS15155 4f572dc8d6e6316d4bcc3173df8e2877 298 SUPERFAMILY SSF46626 80 158 5.16E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS15155 4f572dc8d6e6316d4bcc3173df8e2877 298 SUPERFAMILY SSF46626 221 294 1.05E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS15155 4f572dc8d6e6316d4bcc3173df8e2877 298 Gene3D G3DSA:1.10.760.10 222 294 1.1E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS15155 4f572dc8d6e6316d4bcc3173df8e2877 298 Gene3D G3DSA:1.10.760.10 81 158 7.3E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS15155 4f572dc8d6e6316d4bcc3173df8e2877 298 PANTHER PTHR40942:SF1 184 298 5.8E-25 T 22-04-2016 RPIC12D_RS15155 4f572dc8d6e6316d4bcc3173df8e2877 298 PRINTS PR00607 Class IE cytochrome C signature 283 294 4.0E-14 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RPIC12D_RS15155 4f572dc8d6e6316d4bcc3173df8e2877 298 PRINTS PR00607 Class IE cytochrome C signature 269 281 4.0E-14 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RPIC12D_RS15155 4f572dc8d6e6316d4bcc3173df8e2877 298 PRINTS PR00607 Class IE cytochrome C signature 230 241 4.0E-14 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RPIC12D_RS15155 4f572dc8d6e6316d4bcc3173df8e2877 298 PRINTS PR00607 Class IE cytochrome C signature 241 251 4.0E-14 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RPIC12D_RS08990 83fe91cbf21548e0d142c8c860302c67 237 SUPERFAMILY SSF102114 38 221 1.83E-26 T 22-04-2016 RPIC12D_RS08990 83fe91cbf21548e0d142c8c860302c67 237 Pfam PF04055 Radical SAM superfamily 40 170 3.3E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC12D_RS08990 83fe91cbf21548e0d142c8c860302c67 237 Gene3D G3DSA:3.20.20.70 39 215 4.6E-24 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS08990 83fe91cbf21548e0d142c8c860302c67 237 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 22 207 1.7E-55 T 22-04-2016 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein RPIC12D_RS08990 83fe91cbf21548e0d142c8c860302c67 237 PANTHER PTHR30352:SF4 22 180 1.4E-23 T 22-04-2016 RPIC12D_RS08990 83fe91cbf21548e0d142c8c860302c67 237 Pfam PF13353 4Fe-4S single cluster domain 35 122 6.2E-9 T 22-04-2016 RPIC12D_RS08990 83fe91cbf21548e0d142c8c860302c67 237 PANTHER PTHR30352 22 180 1.4E-23 T 22-04-2016 RPIC12D_RS17185 814e72b02d0a9908044f63a1f412deef 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 3.8E-19 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS17185 814e72b02d0a9908044f63a1f412deef 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.7E-12 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS17185 814e72b02d0a9908044f63a1f412deef 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.7E-12 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS17185 814e72b02d0a9908044f63a1f412deef 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.7E-12 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS17185 814e72b02d0a9908044f63a1f412deef 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.7E-12 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS17185 814e72b02d0a9908044f63a1f412deef 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 19.025 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS17185 814e72b02d0a9908044f63a1f412deef 70 Pfam PF01165 Ribosomal protein S21 4 56 2.4E-18 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS17185 814e72b02d0a9908044f63a1f412deef 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 55 1.0E-14 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS17185 814e72b02d0a9908044f63a1f412deef 70 PANTHER PTHR21109 1 60 1.4E-16 T 22-04-2016 RPIC12D_RS12555 d7ba67160ae80b35ac51937ef9b4126e 238 SUPERFAMILY SSF51419 1 231 2.09E-77 T 22-04-2016 IPR029066 PLP-binding barrel RPIC12D_RS12555 d7ba67160ae80b35ac51937ef9b4126e 238 PANTHER PTHR10146 4 238 1.2E-95 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 RPIC12D_RS12555 d7ba67160ae80b35ac51937ef9b4126e 238 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 81 95 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 RPIC12D_RS12555 d7ba67160ae80b35ac51937ef9b4126e 238 Gene3D G3DSA:3.20.20.10 2 237 2.0E-93 T 22-04-2016 IPR029066 PLP-binding barrel RPIC12D_RS12555 d7ba67160ae80b35ac51937ef9b4126e 238 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 233 3.6E-70 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 RPIC12D_RS12555 d7ba67160ae80b35ac51937ef9b4126e 238 PIRSF PIRSF004848 1 238 2.3E-70 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 RPIC12D_RS12555 d7ba67160ae80b35ac51937ef9b4126e 238 Pfam PF01168 Alanine racemase, N-terminal domain 7 233 1.2E-30 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC12D_RS11675 a4ac31d551e0dad29298d3b4147d53c9 396 Pfam PF01610 Transposase 273 395 3.5E-8 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RPIC12D_RS11675 a4ac31d551e0dad29298d3b4147d53c9 396 Pfam PF00487 Fatty acid desaturase 18 240 8.0E-14 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 RPIC12D_RS11675 a4ac31d551e0dad29298d3b4147d53c9 396 PANTHER PTHR11351:SF33 17 382 7.8E-140 T 22-04-2016 RPIC12D_RS11675 a4ac31d551e0dad29298d3b4147d53c9 396 PANTHER PTHR11351 17 382 7.8E-140 T 22-04-2016 RPIC12D_RS06985 ac35a4706abc03bf11651ea0bbb7a35b 314 Gene3D G3DSA:3.40.190.10 181 263 2.4E-15 T 22-04-2016 RPIC12D_RS06985 ac35a4706abc03bf11651ea0bbb7a35b 314 Pfam PF03466 LysR substrate binding domain 95 296 1.5E-28 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS06985 ac35a4706abc03bf11651ea0bbb7a35b 314 SUPERFAMILY SSF46785 8 89 9.37E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06985 ac35a4706abc03bf11651ea0bbb7a35b 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 3.2E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06985 ac35a4706abc03bf11651ea0bbb7a35b 314 Gene3D G3DSA:3.40.190.10 99 180 2.1E-22 T 22-04-2016 RPIC12D_RS06985 ac35a4706abc03bf11651ea0bbb7a35b 314 SUPERFAMILY SSF53850 96 302 1.54E-30 T 22-04-2016 RPIC12D_RS06985 ac35a4706abc03bf11651ea0bbb7a35b 314 Gene3D G3DSA:1.10.10.10 10 87 1.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06985 ac35a4706abc03bf11651ea0bbb7a35b 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06985 ac35a4706abc03bf11651ea0bbb7a35b 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06985 ac35a4706abc03bf11651ea0bbb7a35b 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06985 ac35a4706abc03bf11651ea0bbb7a35b 314 PANTHER PTHR30537 3 296 4.0E-65 T 22-04-2016 RPIC12D_RS07610 ed040214c8b460121538c9feaf40bd73 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 444 6.4E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS07610 ed040214c8b460121538c9feaf40bd73 452 SUPERFAMILY SSF47384 204 286 2.16E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS07610 ed040214c8b460121538c9feaf40bd73 452 PANTHER PTHR24423:SF474 162 442 1.2E-69 T 22-04-2016 RPIC12D_RS07610 ed040214c8b460121538c9feaf40bd73 452 Pfam PF08521 Two-component sensor kinase N-terminal 1 144 1.3E-36 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal RPIC12D_RS07610 ed040214c8b460121538c9feaf40bd73 452 PANTHER PTHR24423 162 442 1.2E-69 T 22-04-2016 RPIC12D_RS07610 ed040214c8b460121538c9feaf40bd73 452 Gene3D G3DSA:1.10.287.130 213 282 5.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS07610 ed040214c8b460121538c9feaf40bd73 452 Pfam PF00672 HAMP domain 154 215 7.7E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS07610 ed040214c8b460121538c9feaf40bd73 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 387 3.1E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS07610 ed040214c8b460121538c9feaf40bd73 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 401 3.1E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS07610 ed040214c8b460121538c9feaf40bd73 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 3.1E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS07610 ed040214c8b460121538c9feaf40bd73 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 443 3.1E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS07610 ed040214c8b460121538c9feaf40bd73 452 Gene3D G3DSA:3.30.565.10 292 450 4.0E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS07610 ed040214c8b460121538c9feaf40bd73 452 SMART SM00387 331 446 6.9E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS07610 ed040214c8b460121538c9feaf40bd73 452 SUPERFAMILY SSF55874 276 447 1.22E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS07610 ed040214c8b460121538c9feaf40bd73 452 SMART SM00388 221 286 1.1E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS07610 ed040214c8b460121538c9feaf40bd73 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 285 1.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS04770 6a327e628e31c600ffff640bbd209538 112 SUPERFAMILY SSF54292 4 108 1.52E-32 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS04770 6a327e628e31c600ffff640bbd209538 112 Gene3D G3DSA:3.10.20.30 4 109 3.8E-33 T 22-04-2016 IPR012675 Beta-grasp domain RPIC12D_RS04770 6a327e628e31c600ffff640bbd209538 112 PRINTS PR00355 Adrenodoxin signature 60 74 1.3E-9 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 RPIC12D_RS04770 6a327e628e31c600ffff640bbd209538 112 PRINTS PR00355 Adrenodoxin signature 83 91 1.3E-9 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 RPIC12D_RS04770 6a327e628e31c600ffff640bbd209538 112 PRINTS PR00355 Adrenodoxin signature 42 52 1.3E-9 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 RPIC12D_RS04770 6a327e628e31c600ffff640bbd209538 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 9.8E-61 T 22-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 RPIC12D_RS04770 6a327e628e31c600ffff640bbd209538 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 22-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 RPIC12D_RS04770 6a327e628e31c600ffff640bbd209538 112 PANTHER PTHR23426 7 112 3.5E-39 T 22-04-2016 RPIC12D_RS04770 6a327e628e31c600ffff640bbd209538 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 1.2E-13 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS21215 a7be02e121e5088c73db7c1fa4cda864 92 Pfam PF03466 LysR substrate binding domain 1 89 1.5E-16 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS21215 a7be02e121e5088c73db7c1fa4cda864 92 Gene3D G3DSA:3.40.190.10 1 51 1.5E-10 T 22-04-2016 RPIC12D_RS21215 a7be02e121e5088c73db7c1fa4cda864 92 PANTHER PTHR30126:SF31 1 90 1.4E-17 T 22-04-2016 RPIC12D_RS21215 a7be02e121e5088c73db7c1fa4cda864 92 SUPERFAMILY SSF53850 1 90 1.09E-14 T 22-04-2016 RPIC12D_RS21215 a7be02e121e5088c73db7c1fa4cda864 92 PANTHER PTHR30126 1 90 1.4E-17 T 22-04-2016 RPIC12D_RS00595 0aa45ce7168e05f460b8fe71ee8145dd 166 PANTHER PTHR30411 3 165 5.0E-23 T 22-04-2016 RPIC12D_RS00595 0aa45ce7168e05f460b8fe71ee8145dd 166 PANTHER PTHR30411:SF1 3 165 5.0E-23 T 22-04-2016 RPIC12D_RS00595 0aa45ce7168e05f460b8fe71ee8145dd 166 Gene3D G3DSA:3.90.960.10 12 163 7.3E-43 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC12D_RS00595 0aa45ce7168e05f460b8fe71ee8145dd 166 SUPERFAMILY SSF55826 16 162 8.11E-32 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC12D_RS00595 0aa45ce7168e05f460b8fe71ee8145dd 166 Pfam PF04073 Aminoacyl-tRNA editing domain 37 152 7.7E-27 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC12D_RS04225 eeaef78b7e4653505c61a455e51144ea 302 Pfam PF02153 Prephenate dehydrogenase 22 278 4.9E-71 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 RPIC12D_RS04225 eeaef78b7e4653505c61a455e51144ea 302 SUPERFAMILY SSF51735 9 175 4.14E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS04225 eeaef78b7e4653505c61a455e51144ea 302 SUPERFAMILY SSF48179 180 287 9.3E-34 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS04225 eeaef78b7e4653505c61a455e51144ea 302 PANTHER PTHR21363 1 292 2.2E-61 T 22-04-2016 RPIC12D_RS04225 eeaef78b7e4653505c61a455e51144ea 302 Gene3D G3DSA:3.40.50.720 7 185 5.8E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS04225 eeaef78b7e4653505c61a455e51144ea 302 PANTHER PTHR21363:SF0 1 292 2.2E-61 T 22-04-2016 RPIC12D_RS09465 34f379747ec215c1889a1d9002bc26ca 686 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 9 680 2.8E-244 T 22-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 RPIC12D_RS09465 34f379747ec215c1889a1d9002bc26ca 686 PANTHER PTHR22773 1 633 3.9E-256 T 22-04-2016 RPIC12D_RS09465 34f379747ec215c1889a1d9002bc26ca 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 261 287 4.2E-66 T 22-04-2016 RPIC12D_RS09465 34f379747ec215c1889a1d9002bc26ca 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 434 453 4.2E-66 T 22-04-2016 RPIC12D_RS09465 34f379747ec215c1889a1d9002bc26ca 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 119 139 4.2E-66 T 22-04-2016 RPIC12D_RS09465 34f379747ec215c1889a1d9002bc26ca 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 91 116 4.2E-66 T 22-04-2016 RPIC12D_RS09465 34f379747ec215c1889a1d9002bc26ca 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 329 341 4.2E-66 T 22-04-2016 RPIC12D_RS09465 34f379747ec215c1889a1d9002bc26ca 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 239 260 4.2E-66 T 22-04-2016 RPIC12D_RS09465 34f379747ec215c1889a1d9002bc26ca 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 166 187 4.2E-66 T 22-04-2016 RPIC12D_RS09465 34f379747ec215c1889a1d9002bc26ca 686 Pfam PF00361 Proton-conducting membrane transporter 142 424 1.7E-86 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RPIC12D_RS09465 34f379747ec215c1889a1d9002bc26ca 686 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 494 515 3.5E-15 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RPIC12D_RS09465 34f379747ec215c1889a1d9002bc26ca 686 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 93 113 3.5E-15 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RPIC12D_RS09465 34f379747ec215c1889a1d9002bc26ca 686 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 67 91 3.5E-15 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RPIC12D_RS09465 34f379747ec215c1889a1d9002bc26ca 686 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 433 455 3.5E-15 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RPIC12D_RS09465 34f379747ec215c1889a1d9002bc26ca 686 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 279 301 3.5E-15 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RPIC12D_RS09465 34f379747ec215c1889a1d9002bc26ca 686 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 73 130 3.1E-26 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal RPIC12D_RS09465 34f379747ec215c1889a1d9002bc26ca 686 PANTHER PTHR22773:SF50 1 633 3.9E-256 T 22-04-2016 RPIC12D_RS05720 8f31c8d4e85a2959b458c54275b81976 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 2.7E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS05720 8f31c8d4e85a2959b458c54275b81976 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 2.7E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS05720 8f31c8d4e85a2959b458c54275b81976 209 PANTHER PTHR30055:SF20 6 204 6.0E-65 T 22-04-2016 RPIC12D_RS05720 8f31c8d4e85a2959b458c54275b81976 209 Pfam PF16925 Bacterial transcriptional repressor C-terminal 94 193 9.2E-9 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC12D_RS05720 8f31c8d4e85a2959b458c54275b81976 209 Gene3D G3DSA:1.10.357.10 15 203 1.7E-41 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC12D_RS05720 8f31c8d4e85a2959b458c54275b81976 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 65 1.3E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS05720 8f31c8d4e85a2959b458c54275b81976 209 SUPERFAMILY SSF48498 91 204 7.51E-26 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC12D_RS05720 8f31c8d4e85a2959b458c54275b81976 209 SUPERFAMILY SSF46689 16 85 1.08E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS05720 8f31c8d4e85a2959b458c54275b81976 209 PANTHER PTHR30055 6 204 6.0E-65 T 22-04-2016 RPIC12D_RS02300 5428a84a3720ec3826d2b42c31dd8c8e 293 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 157 186 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RPIC12D_RS02300 5428a84a3720ec3826d2b42c31dd8c8e 293 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 293 8.4E-126 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RPIC12D_RS02300 5428a84a3720ec3826d2b42c31dd8c8e 293 SUPERFAMILY SSF52210 128 292 4.32E-53 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RPIC12D_RS02300 5428a84a3720ec3826d2b42c31dd8c8e 293 SMART SM00881 4 103 3.8E-28 T 22-04-2016 IPR003781 CoA-binding GO:0048037 RPIC12D_RS02300 5428a84a3720ec3826d2b42c31dd8c8e 293 PANTHER PTHR11117:SF2 1 293 1.7E-158 T 22-04-2016 RPIC12D_RS02300 5428a84a3720ec3826d2b42c31dd8c8e 293 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 241 254 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RPIC12D_RS02300 5428a84a3720ec3826d2b42c31dd8c8e 293 Pfam PF00549 CoA-ligase 156 267 8.3E-15 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RPIC12D_RS02300 5428a84a3720ec3826d2b42c31dd8c8e 293 Gene3D G3DSA:3.40.50.720 2 124 8.2E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02300 5428a84a3720ec3826d2b42c31dd8c8e 293 PRINTS PR01798 Succinyl-CoA synthase signature 245 262 1.8E-33 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RPIC12D_RS02300 5428a84a3720ec3826d2b42c31dd8c8e 293 PRINTS PR01798 Succinyl-CoA synthase signature 213 226 1.8E-33 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RPIC12D_RS02300 5428a84a3720ec3826d2b42c31dd8c8e 293 PRINTS PR01798 Succinyl-CoA synthase signature 85 102 1.8E-33 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RPIC12D_RS02300 5428a84a3720ec3826d2b42c31dd8c8e 293 PRINTS PR01798 Succinyl-CoA synthase signature 182 200 1.8E-33 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RPIC12D_RS02300 5428a84a3720ec3826d2b42c31dd8c8e 293 Gene3D G3DSA:3.40.50.261 125 292 2.0E-70 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RPIC12D_RS02300 5428a84a3720ec3826d2b42c31dd8c8e 293 PIRSF PIRSF001553 1 293 5.4E-116 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RPIC12D_RS02300 5428a84a3720ec3826d2b42c31dd8c8e 293 Pfam PF02629 CoA binding domain 6 102 8.7E-24 T 22-04-2016 IPR003781 CoA-binding GO:0048037 RPIC12D_RS02300 5428a84a3720ec3826d2b42c31dd8c8e 293 SUPERFAMILY SSF51735 1 127 3.28E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02300 5428a84a3720ec3826d2b42c31dd8c8e 293 PANTHER PTHR11117 1 293 1.7E-158 T 22-04-2016 RPIC12D_RS01150 6367f65f0586af4211541905d251738e 338 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC12D_RS01150 6367f65f0586af4211541905d251738e 338 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 324 2.3E-48 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC12D_RS01150 6367f65f0586af4211541905d251738e 338 Gene3D G3DSA:1.10.1040.10 188 330 2.6E-54 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC12D_RS01150 6367f65f0586af4211541905d251738e 338 PIRSF PIRSF000114 1 336 1.1E-92 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC12D_RS01150 6367f65f0586af4211541905d251738e 338 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 326 34.716 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC12D_RS01150 6367f65f0586af4211541905d251738e 338 SUPERFAMILY SSF48179 183 335 4.25E-53 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS01150 6367f65f0586af4211541905d251738e 338 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 162 5.8E-34 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC12D_RS01150 6367f65f0586af4211541905d251738e 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 137 157 1.1E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC12D_RS01150 6367f65f0586af4211541905d251738e 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 1.1E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC12D_RS01150 6367f65f0586af4211541905d251738e 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 1.1E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC12D_RS01150 6367f65f0586af4211541905d251738e 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 1.1E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC12D_RS01150 6367f65f0586af4211541905d251738e 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 1.1E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC12D_RS01150 6367f65f0586af4211541905d251738e 338 SUPERFAMILY SSF51735 1 184 1.17E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS01150 6367f65f0586af4211541905d251738e 338 Gene3D G3DSA:3.40.50.720 1 187 1.2E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS01150 6367f65f0586af4211541905d251738e 338 PANTHER PTHR11728 1 335 3.8E-108 T 22-04-2016 RPIC12D_RS08065 1195ed8ba7b8042a08648f71bcf7f06e 104 PANTHER PTHR21016:SF0 14 54 1.4E-12 T 22-04-2016 RPIC12D_RS08065 1195ed8ba7b8042a08648f71bcf7f06e 104 PANTHER PTHR21016:SF0 75 99 1.4E-12 T 22-04-2016 RPIC12D_RS08065 1195ed8ba7b8042a08648f71bcf7f06e 104 PANTHER PTHR21016 14 54 1.4E-12 T 22-04-2016 RPIC12D_RS08065 1195ed8ba7b8042a08648f71bcf7f06e 104 PANTHER PTHR21016 75 99 1.4E-12 T 22-04-2016 RPIC12D_RS08065 1195ed8ba7b8042a08648f71bcf7f06e 104 Pfam PF05154 TM2 domain 14 77 6.2E-16 T 22-04-2016 IPR007829 TM2 domain RPIC12D_RS09385 da8a3f9c5207471c9e6f7cb0f6d8da21 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 3.0E-43 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09385 da8a3f9c5207471c9e6f7cb0f6d8da21 100 Pfam PF00547 Urease, gamma subunit 2 99 2.1E-46 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09385 da8a3f9c5207471c9e6f7cb0f6d8da21 100 Gene3D G3DSA:3.30.280.10 2 99 5.0E-49 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09385 da8a3f9c5207471c9e6f7cb0f6d8da21 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 2 99 1.4E-52 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09385 da8a3f9c5207471c9e6f7cb0f6d8da21 100 PANTHER PTHR33569 2 100 5.8E-46 T 22-04-2016 RPIC12D_RS09385 da8a3f9c5207471c9e6f7cb0f6d8da21 100 PANTHER PTHR33569:SF1 2 100 5.8E-46 T 22-04-2016 RPIC12D_RS09385 da8a3f9c5207471c9e6f7cb0f6d8da21 100 SUPERFAMILY SSF54111 2 99 1.57E-46 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09385 da8a3f9c5207471c9e6f7cb0f6d8da21 100 PIRSF PIRSF001223 1 100 1.5E-50 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09385 da8a3f9c5207471c9e6f7cb0f6d8da21 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.796 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS14765 760f32077436fb77c6e9cd9059e0f7bb 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.927 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14765 760f32077436fb77c6e9cd9059e0f7bb 103 Gene3D G3DSA:3.30.70.600 3 102 1.1E-44 T 22-04-2016 IPR027486 Ribosomal protein S10 domain RPIC12D_RS14765 760f32077436fb77c6e9cd9059e0f7bb 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14765 760f32077436fb77c6e9cd9059e0f7bb 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.3E-36 T 22-04-2016 IPR027486 Ribosomal protein S10 domain RPIC12D_RS14765 760f32077436fb77c6e9cd9059e0f7bb 103 SUPERFAMILY SSF54999 5 102 1.57E-38 T 22-04-2016 IPR027486 Ribosomal protein S10 domain RPIC12D_RS14765 760f32077436fb77c6e9cd9059e0f7bb 103 PANTHER PTHR11700 1 102 4.3E-52 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14765 760f32077436fb77c6e9cd9059e0f7bb 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 2.3E-46 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14765 760f32077436fb77c6e9cd9059e0f7bb 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.6E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14765 760f32077436fb77c6e9cd9059e0f7bb 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.6E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14765 760f32077436fb77c6e9cd9059e0f7bb 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.6E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14765 760f32077436fb77c6e9cd9059e0f7bb 103 SMART SM01403 7 101 1.2E-57 T 22-04-2016 IPR027486 Ribosomal protein S10 domain RPIC12D_RS01840 738205d3a85418ca6cc543fe01463aad 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS01840 738205d3a85418ca6cc543fe01463aad 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS01840 738205d3a85418ca6cc543fe01463aad 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS01840 738205d3a85418ca6cc543fe01463aad 314 PANTHER PTHR30126:SF2 1 283 5.0E-82 T 22-04-2016 RPIC12D_RS01840 738205d3a85418ca6cc543fe01463aad 314 Gene3D G3DSA:1.10.10.10 1 81 1.8E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS01840 738205d3a85418ca6cc543fe01463aad 314 Pfam PF03466 LysR substrate binding domain 91 267 1.2E-20 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS01840 738205d3a85418ca6cc543fe01463aad 314 PANTHER PTHR30126 1 283 5.0E-82 T 22-04-2016 RPIC12D_RS01840 738205d3a85418ca6cc543fe01463aad 314 SUPERFAMILY SSF46785 1 86 7.41E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS01840 738205d3a85418ca6cc543fe01463aad 314 Gene3D G3DSA:3.40.190.10 82 182 7.1E-6 T 22-04-2016 RPIC12D_RS01840 738205d3a85418ca6cc543fe01463aad 314 SUPERFAMILY SSF53850 90 267 3.08E-21 T 22-04-2016 RPIC12D_RS01840 738205d3a85418ca6cc543fe01463aad 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.6E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS01840 738205d3a85418ca6cc543fe01463aad 314 Gene3D G3DSA:3.40.190.10 225 264 1.2E-6 T 22-04-2016 RPIC12D_RS11215 5c8892bd2b72fcbc2ea154bf085a216b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS11215 5c8892bd2b72fcbc2ea154bf085a216b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS11215 5c8892bd2b72fcbc2ea154bf085a216b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS11215 5c8892bd2b72fcbc2ea154bf085a216b 313 Gene3D G3DSA:3.40.190.10 91 179 4.7E-20 T 22-04-2016 RPIC12D_RS11215 5c8892bd2b72fcbc2ea154bf085a216b 313 Gene3D G3DSA:3.40.190.10 180 260 1.1E-25 T 22-04-2016 RPIC12D_RS11215 5c8892bd2b72fcbc2ea154bf085a216b 313 PANTHER PTHR30126 1 309 2.4E-130 T 22-04-2016 RPIC12D_RS11215 5c8892bd2b72fcbc2ea154bf085a216b 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 3.3E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS11215 5c8892bd2b72fcbc2ea154bf085a216b 313 PANTHER PTHR30126:SF6 1 309 2.4E-130 T 22-04-2016 RPIC12D_RS11215 5c8892bd2b72fcbc2ea154bf085a216b 313 SUPERFAMILY SSF53850 91 298 1.77E-41 T 22-04-2016 RPIC12D_RS11215 5c8892bd2b72fcbc2ea154bf085a216b 313 SUPERFAMILY SSF46785 12 113 5.99E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS11215 5c8892bd2b72fcbc2ea154bf085a216b 313 Gene3D G3DSA:1.10.10.10 1 81 1.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS11215 5c8892bd2b72fcbc2ea154bf085a216b 313 Pfam PF03466 LysR substrate binding domain 89 292 2.7E-39 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS04385 6cb0c0066ef2375eb03162563a1485df 234 Pfam PF00293 NUDIX domain 61 186 3.9E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC12D_RS04385 6cb0c0066ef2375eb03162563a1485df 234 PANTHER PTHR12992 3 228 2.8E-53 T 22-04-2016 RPIC12D_RS04385 6cb0c0066ef2375eb03162563a1485df 234 Gene3D G3DSA:3.90.79.10 58 232 9.5E-40 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS04385 6cb0c0066ef2375eb03162563a1485df 234 SUPERFAMILY SSF55811 61 225 3.79E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS02055 d066b9357445151ad570241a81cf397c 250 SMART SM00563 77 193 1.6E-23 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RPIC12D_RS02055 d066b9357445151ad570241a81cf397c 250 SUPERFAMILY SSF69593 7 248 4.97E-39 T 22-04-2016 RPIC12D_RS02055 d066b9357445151ad570241a81cf397c 250 Pfam PF01553 Acyltransferase 65 190 6.6E-18 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RPIC12D_RS02055 d066b9357445151ad570241a81cf397c 250 PANTHER PTHR10434 4 246 6.2E-47 T 22-04-2016 RPIC12D_RS02055 d066b9357445151ad570241a81cf397c 250 Gene3D G3DSA:3.40.1130.10 64 237 2.5E-22 T 22-04-2016 RPIC12D_RS09775 d07d32cc6bc8c43fa90598e42a85b5ec 222 Pfam PF13590 Domain of unknown function (DUF4136) 48 193 5.2E-18 T 22-04-2016 IPR025411 Domain of unknown function DUF4136 RPIC12D_RS09485 de2092b9550f9d6f27f1c843301e3871 354 PANTHER PTHR11432:SF3 1 354 1.6E-166 T 22-04-2016 RPIC12D_RS09485 de2092b9550f9d6f27f1c843301e3871 354 Pfam PF00146 NADH dehydrogenase 26 342 3.3E-126 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RPIC12D_RS09485 de2092b9550f9d6f27f1c843301e3871 354 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 230 243 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 RPIC12D_RS09485 de2092b9550f9d6f27f1c843301e3871 354 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 18 349 24.803 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RPIC12D_RS09485 de2092b9550f9d6f27f1c843301e3871 354 PANTHER PTHR11432 1 354 1.6E-166 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RPIC12D_RS15365 a2c8c1984f446a8b71f27920621a0f9c 243 SUPERFAMILY SSF51206 38 158 2.75E-28 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like RPIC12D_RS15365 a2c8c1984f446a8b71f27920621a0f9c 243 Pfam PF00027 Cyclic nucleotide-binding domain 52 137 5.8E-16 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC12D_RS15365 a2c8c1984f446a8b71f27920621a0f9c 243 SUPERFAMILY SSF46785 168 238 1.56E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS15365 a2c8c1984f446a8b71f27920621a0f9c 243 SMART SM00419 182 230 3.6E-5 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS15365 a2c8c1984f446a8b71f27920621a0f9c 243 Pfam PF13545 Crp-like helix-turn-helix domain 170 236 1.9E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS15365 a2c8c1984f446a8b71f27920621a0f9c 243 PANTHER PTHR24567:SF30 32 239 3.3E-41 T 22-04-2016 RPIC12D_RS15365 a2c8c1984f446a8b71f27920621a0f9c 243 PANTHER PTHR24567 32 239 3.3E-41 T 22-04-2016 RPIC12D_RS15365 a2c8c1984f446a8b71f27920621a0f9c 243 Gene3D G3DSA:2.60.120.10 33 162 1.6E-25 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS15365 a2c8c1984f446a8b71f27920621a0f9c 243 SMART SM00100 32 153 6.5E-15 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC12D_RS15365 a2c8c1984f446a8b71f27920621a0f9c 243 Gene3D G3DSA:1.10.10.10 168 238 3.2E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 SMART SM00388 703 770 6.4E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 SMART SM00387 812 927 3.2E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 854 868 7.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 911 924 7.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 887 905 7.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 872 882 7.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 25 233 2.6E-95 T 22-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 Gene3D G3DSA:1.10.287.130 699 756 4.6E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 SUPERFAMILY SSF47384 696 770 1.14E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 816 925 2.6E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 SUPERFAMILY SSF52402 254 355 5.65E-6 T 22-04-2016 RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 Gene3D G3DSA:3.40.50.620 248 351 7.8E-7 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 PANTHER PTHR24423:SF562 25 200 1.1E-127 T 22-04-2016 RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 PANTHER PTHR24423:SF562 637 930 1.1E-127 T 22-04-2016 RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 SUPERFAMILY SSF55874 760 929 3.54E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 Gene3D G3DSA:1.20.120.620 432 533 1.4E-37 T 22-04-2016 RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 Gene3D G3DSA:3.30.565.10 757 927 8.3E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 Gene3D G3DSA:3.40.50.300 23 232 1.1E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 Pfam PF00512 His Kinase A (phospho-acceptor) domain 704 769 1.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 Pfam PF13493 Domain of unknown function (DUF4118) 433 539 8.5E-33 T 22-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 Pfam PF13492 GAF domain 560 684 2.8E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 PANTHER PTHR24423 25 200 1.1E-127 T 22-04-2016 RPIC12D_RS16395 eddd2eba4b8378084797d1395d809a25 938 PANTHER PTHR24423 637 930 1.1E-127 T 22-04-2016 RPIC12D_RS01400 e0ce76f6458e9ddf0a52358da5587fe9 291 SUPERFAMILY SSF57716 239 290 9.03E-18 T 22-04-2016 RPIC12D_RS01400 e0ce76f6458e9ddf0a52358da5587fe9 291 Gene3D G3DSA:3.20.190.10 2 151 2.1E-32 T 22-04-2016 RPIC12D_RS01400 e0ce76f6458e9ddf0a52358da5587fe9 291 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 290 1.0E-73 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RPIC12D_RS01400 e0ce76f6458e9ddf0a52358da5587fe9 291 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 151 240 1.6E-18 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RPIC12D_RS01400 e0ce76f6458e9ddf0a52358da5587fe9 291 Pfam PF06827 Zinc finger found in FPG and IleRS 263 290 1.1E-10 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type RPIC12D_RS01400 e0ce76f6458e9ddf0a52358da5587fe9 291 SUPERFAMILY SSF81624 2 138 2.09E-33 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RPIC12D_RS01400 e0ce76f6458e9ddf0a52358da5587fe9 291 ProSitePatterns PS01242 Zinc finger FPG-type signature. 266 290 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 RPIC12D_RS01400 e0ce76f6458e9ddf0a52358da5587fe9 291 SMART SM00898 2 133 7.8E-44 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RPIC12D_RS01400 e0ce76f6458e9ddf0a52358da5587fe9 291 SMART SM01232 151 243 3.7E-41 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RPIC12D_RS01400 e0ce76f6458e9ddf0a52358da5587fe9 291 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 291 41.377 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RPIC12D_RS01400 e0ce76f6458e9ddf0a52358da5587fe9 291 PANTHER PTHR22993:SF15 1 291 5.2E-108 T 22-04-2016 RPIC12D_RS01400 e0ce76f6458e9ddf0a52358da5587fe9 291 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 132 3.9E-28 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RPIC12D_RS01400 e0ce76f6458e9ddf0a52358da5587fe9 291 Gene3D G3DSA:1.10.8.50 152 291 2.4E-47 T 22-04-2016 RPIC12D_RS01400 e0ce76f6458e9ddf0a52358da5587fe9 291 PANTHER PTHR22993 1 291 5.2E-108 T 22-04-2016 RPIC12D_RS01400 e0ce76f6458e9ddf0a52358da5587fe9 291 SUPERFAMILY SSF46946 152 243 1.91E-25 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RPIC12D_RS02600 581b10dd947cc4683462b31e359641d6 368 Gene3D G3DSA:3.40.50.720 190 306 6.7E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02600 581b10dd947cc4683462b31e359641d6 368 Pfam PF00107 Zinc-binding dehydrogenase 197 319 2.0E-25 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIC12D_RS02600 581b10dd947cc4683462b31e359641d6 368 SUPERFAMILY SSF50129 318 368 1.41E-12 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS02600 581b10dd947cc4683462b31e359641d6 368 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 367 3.9E-191 T 22-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 RPIC12D_RS02600 581b10dd947cc4683462b31e359641d6 368 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 RPIC12D_RS02600 581b10dd947cc4683462b31e359641d6 368 PANTHER PTHR11695 128 368 6.5E-195 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RPIC12D_RS02600 581b10dd947cc4683462b31e359641d6 368 PANTHER PTHR11695 15 108 6.5E-195 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RPIC12D_RS02600 581b10dd947cc4683462b31e359641d6 368 SUPERFAMILY SSF51735 160 333 3.83E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02600 581b10dd947cc4683462b31e359641d6 368 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 126 3.8E-24 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIC12D_RS02600 581b10dd947cc4683462b31e359641d6 368 PANTHER PTHR11695:SF560 128 368 6.5E-195 T 22-04-2016 RPIC12D_RS02600 581b10dd947cc4683462b31e359641d6 368 PANTHER PTHR11695:SF560 15 108 6.5E-195 T 22-04-2016 RPIC12D_RS02600 581b10dd947cc4683462b31e359641d6 368 SUPERFAMILY SSF50129 1 185 1.83E-70 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS02600 581b10dd947cc4683462b31e359641d6 368 Gene3D G3DSA:3.90.180.10 1 189 2.7E-63 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS02600 581b10dd947cc4683462b31e359641d6 368 SMART SM00829 12 366 1.1E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 PANTHER PTHR11670 1 307 1.1E-293 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 PANTHER PTHR11670 327 468 1.1E-293 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 468 3.3E-238 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 SUPERFAMILY SSF53732 2 468 2.75E-165 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 ProSitePatterns PS01244 Aconitase family signature 2. 402 415 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 Gene3D G3DSA:3.40.1060.10 167 279 1.6E-40 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 Pfam PF00330 Aconitase family (aconitate hydratase) 7 460 4.4E-155 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 PANTHER PTHR11670:SF38 1 307 1.1E-293 T 22-04-2016 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 PANTHER PTHR11670:SF38 327 468 1.1E-293 T 22-04-2016 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 469 60.804 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 PRINTS PR00415 Aconitase family signature 402 415 5.2E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 PRINTS PR00415 Aconitase family signature 343 354 5.2E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 PRINTS PR00415 Aconitase family signature 286 300 5.2E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 PRINTS PR00415 Aconitase family signature 209 222 5.2E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 PRINTS PR00415 Aconitase family signature 133 148 5.2E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 PRINTS PR00415 Aconitase family signature 119 132 5.2E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 PRINTS PR00415 Aconitase family signature 195 208 5.2E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 PRINTS PR00415 Aconitase family signature 108 116 5.2E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 PRINTS PR00415 Aconitase family signature 82 95 5.2E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 Gene3D G3DSA:3.30.499.10 293 303 1.5E-61 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 Gene3D G3DSA:3.30.499.10 335 468 1.5E-61 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09165 cf5bb5f618237f8a461a57fb918d8922 469 Gene3D G3DSA:3.30.499.10 3 158 1.1E-19 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS04585 a36fef8a80ab1e310ba0c5926f2fcbc4 239 SUPERFAMILY SSF50447 2 92 4.59E-12 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC12D_RS04585 a36fef8a80ab1e310ba0c5926f2fcbc4 239 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 191 233 5.3E-11 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RPIC12D_RS04585 a36fef8a80ab1e310ba0c5926f2fcbc4 239 SMART SM00863 191 234 1.3E-12 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RPIC12D_RS04585 a36fef8a80ab1e310ba0c5926f2fcbc4 239 Pfam PF01411 tRNA synthetases class II (A) 18 98 1.1E-8 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 RPIC12D_RS04585 a36fef8a80ab1e310ba0c5926f2fcbc4 239 PANTHER PTHR11777 1 233 1.3E-47 T 22-04-2016 RPIC12D_RS04585 a36fef8a80ab1e310ba0c5926f2fcbc4 239 SUPERFAMILY SSF55186 98 235 1.57E-30 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RPIC12D_RS02825 b6e7e611abc8fe02fac32507c7a8041d 190 PANTHER PTHR30327 6 190 1.7E-59 T 22-04-2016 RPIC12D_RS02825 b6e7e611abc8fe02fac32507c7a8041d 190 PANTHER PTHR30327:SF1 6 190 1.7E-59 T 22-04-2016 RPIC12D_RS02825 b6e7e611abc8fe02fac32507c7a8041d 190 Pfam PF02622 Uncharacterized ACR, COG1678 19 177 2.2E-49 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 RPIC12D_RS02825 b6e7e611abc8fe02fac32507c7a8041d 190 SUPERFAMILY SSF143456 8 190 8.76E-66 T 22-04-2016 RPIC12D_RS02825 b6e7e611abc8fe02fac32507c7a8041d 190 Gene3D G3DSA:3.40.1740.10 8 47 7.0E-35 T 22-04-2016 RPIC12D_RS02825 b6e7e611abc8fe02fac32507c7a8041d 190 Gene3D G3DSA:3.40.1740.10 134 181 7.0E-35 T 22-04-2016 RPIC12D_RS02825 b6e7e611abc8fe02fac32507c7a8041d 190 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 8 190 37.907 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 RPIC12D_RS02825 b6e7e611abc8fe02fac32507c7a8041d 190 Gene3D G3DSA:3.30.70.1300 48 133 8.7E-31 T 22-04-2016 RPIC12D_RS07325 09fef152dfb867b8424cfe1f71f0637b 356 PANTHER PTHR30146:SF30 4 339 1.3E-92 T 22-04-2016 RPIC12D_RS07325 09fef152dfb867b8424cfe1f71f0637b 356 Gene3D G3DSA:3.40.50.2300 175 332 1.2E-47 T 22-04-2016 RPIC12D_RS07325 09fef152dfb867b8424cfe1f71f0637b 356 Gene3D G3DSA:3.40.50.2300 62 174 7.7E-36 T 22-04-2016 RPIC12D_RS07325 09fef152dfb867b8424cfe1f71f0637b 356 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.7E-16 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC12D_RS07325 09fef152dfb867b8424cfe1f71f0637b 356 Gene3D G3DSA:1.10.260.40 4 61 7.6E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS07325 09fef152dfb867b8424cfe1f71f0637b 356 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 326 4.9E-32 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain RPIC12D_RS07325 09fef152dfb867b8424cfe1f71f0637b 356 SMART SM00354 2 72 4.4E-25 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC12D_RS07325 09fef152dfb867b8424cfe1f71f0637b 356 SUPERFAMILY SSF47413 4 60 1.59E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS07325 09fef152dfb867b8424cfe1f71f0637b 356 PANTHER PTHR30146 4 339 1.3E-92 T 22-04-2016 RPIC12D_RS07325 09fef152dfb867b8424cfe1f71f0637b 356 SUPERFAMILY SSF53822 59 326 5.39E-67 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS15725 5ffa408a544f3760e9fc16f148ed07f6 218 Gene3D G3DSA:3.60.15.10 6 202 1.1E-53 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS15725 5ffa408a544f3760e9fc16f148ed07f6 218 PANTHER PTHR11935:SF115 1 215 9.2E-103 T 22-04-2016 RPIC12D_RS15725 5ffa408a544f3760e9fc16f148ed07f6 218 PANTHER PTHR11935 1 215 9.2E-103 T 22-04-2016 RPIC12D_RS15725 5ffa408a544f3760e9fc16f148ed07f6 218 SUPERFAMILY SSF56281 6 207 7.99E-55 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS15725 5ffa408a544f3760e9fc16f148ed07f6 218 SMART SM00849 12 191 1.2E-35 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS15725 5ffa408a544f3760e9fc16f148ed07f6 218 Pfam PF00753 Metallo-beta-lactamase superfamily 9 191 2.1E-33 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS09560 ccb68bb06a6db4d4f9b28db35d704349 419 SUPERFAMILY SSF53822 27 379 4.71E-64 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS09560 ccb68bb06a6db4d4f9b28db35d704349 419 Pfam PF13458 Periplasmic binding protein 27 381 3.2E-66 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC12D_RS09560 ccb68bb06a6db4d4f9b28db35d704349 419 Gene3D G3DSA:3.40.50.2300 162 309 3.9E-21 T 22-04-2016 RPIC12D_RS09560 ccb68bb06a6db4d4f9b28db35d704349 419 Gene3D G3DSA:3.40.50.2300 310 369 2.3E-27 T 22-04-2016 RPIC12D_RS09560 ccb68bb06a6db4d4f9b28db35d704349 419 Gene3D G3DSA:3.40.50.2300 24 161 2.3E-27 T 22-04-2016 RPIC12D_RS09560 ccb68bb06a6db4d4f9b28db35d704349 419 PANTHER PTHR30483 1 379 6.5E-44 T 22-04-2016 RPIC12D_RS16170 1d98d20f603dd955b8b6c524bb7dc2af 314 Gene3D G3DSA:1.10.800.10 38 303 2.1E-98 T 22-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 RPIC12D_RS16170 1d98d20f603dd955b8b6c524bb7dc2af 314 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 108 130 1.5E-9 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RPIC12D_RS16170 1d98d20f603dd955b8b6c524bb7dc2af 314 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 213 231 1.5E-9 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RPIC12D_RS16170 1d98d20f603dd955b8b6c524bb7dc2af 314 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 245 264 1.5E-9 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RPIC12D_RS16170 1d98d20f603dd955b8b6c524bb7dc2af 314 SUPERFAMILY SSF56534 23 310 4.58E-107 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RPIC12D_RS16170 1d98d20f603dd955b8b6c524bb7dc2af 314 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 151 162 - T 22-04-2016 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 RPIC12D_RS16170 1d98d20f603dd955b8b6c524bb7dc2af 314 PANTHER PTHR11473 53 266 1.1E-73 T 22-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 RPIC12D_RS16170 1d98d20f603dd955b8b6c524bb7dc2af 314 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 47 268 4.4E-45 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RPIC12D_RS16170 1d98d20f603dd955b8b6c524bb7dc2af 314 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 43 284 1.3E-116 T 22-04-2016 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158|UniPathway: UPA00139 RPIC12D_RS15200 2d976fc500df9a4bcdfbdc1406801ab2 340 SUPERFAMILY SSF55447 224 326 7.85E-28 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC12D_RS15200 2d976fc500df9a4bcdfbdc1406801ab2 340 PANTHER PTHR11908:SF97 162 328 4.9E-130 T 22-04-2016 RPIC12D_RS15200 2d976fc500df9a4bcdfbdc1406801ab2 340 PANTHER PTHR11908:SF97 1 118 4.9E-130 T 22-04-2016 RPIC12D_RS15200 2d976fc500df9a4bcdfbdc1406801ab2 340 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 227 324 1.6E-19 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC12D_RS15200 2d976fc500df9a4bcdfbdc1406801ab2 340 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 6 219 1.9E-48 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 RPIC12D_RS15200 2d976fc500df9a4bcdfbdc1406801ab2 340 Gene3D G3DSA:3.30.465.10 57 112 1.7E-34 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC12D_RS15200 2d976fc500df9a4bcdfbdc1406801ab2 340 Gene3D G3DSA:3.30.465.10 157 219 1.7E-34 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC12D_RS15200 2d976fc500df9a4bcdfbdc1406801ab2 340 SMART SM01092 226 326 1.9E-28 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC12D_RS15200 2d976fc500df9a4bcdfbdc1406801ab2 340 Gene3D G3DSA:3.30.43.10 1 50 1.4E-15 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RPIC12D_RS15200 2d976fc500df9a4bcdfbdc1406801ab2 340 PANTHER PTHR11908 162 328 4.9E-130 T 22-04-2016 RPIC12D_RS15200 2d976fc500df9a4bcdfbdc1406801ab2 340 PANTHER PTHR11908 1 118 4.9E-130 T 22-04-2016 RPIC12D_RS15200 2d976fc500df9a4bcdfbdc1406801ab2 340 Gene3D G3DSA:3.30.390.50 224 327 5.0E-36 T 22-04-2016 RPIC12D_RS15200 2d976fc500df9a4bcdfbdc1406801ab2 340 SUPERFAMILY SSF56176 2 219 9.27E-60 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 504 2.0E-138 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 Gene3D G3DSA:1.20.210.10 39 589 2.3E-187 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 648 0.0 T 22-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 PANTHER PTHR10422:SF26 33 615 0.0 T 22-04-2016 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 SUPERFAMILY SSF81442 43 559 2.49E-179 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 5.9E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 5.9E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 5.9E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 5.9E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 5.9E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 5.9E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 5.9E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 5.9E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 5.9E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 5.9E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 5.9E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 5.9E-96 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS14085 c8d29e9c13135ec57f6b9b596b8a5440 659 PANTHER PTHR10422 33 615 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS17345 5206c31a9a7978580a19852f485bfa41 140 Gene3D G3DSA:3.30.230.10 6 102 6.8E-25 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC12D_RS17345 5206c31a9a7978580a19852f485bfa41 140 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 14 87 5.0E-32 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RPIC12D_RS17345 5206c31a9a7978580a19852f485bfa41 140 SUPERFAMILY SSF54211 5 101 4.05E-22 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS17345 5206c31a9a7978580a19852f485bfa41 140 Pfam PF00825 Ribonuclease P 7 100 3.1E-23 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RPIC12D_RS17345 5206c31a9a7978580a19852f485bfa41 140 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 10 88 9.3E-17 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RPIC12D_RS17345 5206c31a9a7978580a19852f485bfa41 140 PANTHER PTHR33992 2 140 8.9E-20 T 22-04-2016 RPIC12D_RS17345 5206c31a9a7978580a19852f485bfa41 140 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 122 15.798 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RPIC12D_RS00795 2484af1010250859938a2e1814f8075d 290 PANTHER PTHR30136 4 282 4.2E-81 T 22-04-2016 RPIC12D_RS00795 2484af1010250859938a2e1814f8075d 290 Pfam PF09339 IclR helix-turn-helix domain 30 81 3.9E-13 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC12D_RS00795 2484af1010250859938a2e1814f8075d 290 Gene3D G3DSA:3.30.450.40 96 285 6.5E-45 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS00795 2484af1010250859938a2e1814f8075d 290 Gene3D G3DSA:1.10.10.10 23 95 7.4E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00795 2484af1010250859938a2e1814f8075d 290 SMART SM00346 28 117 8.6E-16 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC12D_RS00795 2484af1010250859938a2e1814f8075d 290 Pfam PF01614 Bacterial transcriptional regulator 146 278 4.8E-7 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RPIC12D_RS00795 2484af1010250859938a2e1814f8075d 290 SUPERFAMILY SSF55781 99 282 1.37E-32 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS00795 2484af1010250859938a2e1814f8075d 290 SUPERFAMILY SSF46785 28 100 7.96E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00795 2484af1010250859938a2e1814f8075d 290 PANTHER PTHR30136:SF8 4 282 4.2E-81 T 22-04-2016 RPIC12D_RS01965 a3d4d48320e8d39fbc34610208699038 524 Gene3D G3DSA:3.40.140.20 247 364 4.3E-47 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RPIC12D_RS01965 a3d4d48320e8d39fbc34610208699038 524 PANTHER PTHR11692:SF2 1 524 3.6E-301 T 22-04-2016 RPIC12D_RS01965 a3d4d48320e8d39fbc34610208699038 524 Pfam PF02142 MGS-like domain 14 129 8.7E-31 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC12D_RS01965 a3d4d48320e8d39fbc34610208699038 524 PIRSF PIRSF000414 1 524 4.9E-216 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RPIC12D_RS01965 a3d4d48320e8d39fbc34610208699038 524 SMART SM00851 14 129 1.5E-63 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC12D_RS01965 a3d4d48320e8d39fbc34610208699038 524 Gene3D G3DSA:3.40.140.20 372 514 7.2E-55 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RPIC12D_RS01965 a3d4d48320e8d39fbc34610208699038 524 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4 524 5.8E-224 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RPIC12D_RS01965 a3d4d48320e8d39fbc34610208699038 524 SUPERFAMILY SSF53927 215 524 6.42E-124 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RPIC12D_RS01965 a3d4d48320e8d39fbc34610208699038 524 SMART SM00798 134 456 3.3E-206 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RPIC12D_RS01965 a3d4d48320e8d39fbc34610208699038 524 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 524 44.739 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RPIC12D_RS01965 a3d4d48320e8d39fbc34610208699038 524 SUPERFAMILY SSF52335 2 193 1.31E-71 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC12D_RS01965 a3d4d48320e8d39fbc34610208699038 524 PANTHER PTHR11692 1 524 3.6E-301 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RPIC12D_RS01965 a3d4d48320e8d39fbc34610208699038 524 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 454 4.4E-118 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RPIC12D_RS01965 a3d4d48320e8d39fbc34610208699038 524 Gene3D G3DSA:3.40.50.1380 1 187 2.6E-87 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC12D_RS14540 f713ad3c6a7cd92c8dc3e2b46820cf8c 361 Pfam PF11104 Type IV pilus assembly protein PilM; 16 359 6.9E-118 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM RPIC12D_RS14540 f713ad3c6a7cd92c8dc3e2b46820cf8c 361 PANTHER PTHR32432:SF3 1 361 5.4E-34 T 22-04-2016 RPIC12D_RS14540 f713ad3c6a7cd92c8dc3e2b46820cf8c 361 Gene3D G3DSA:3.30.420.40 14 106 5.3E-8 T 22-04-2016 RPIC12D_RS14540 f713ad3c6a7cd92c8dc3e2b46820cf8c 361 SMART SM00842 14 176 3.3E-4 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RPIC12D_RS14540 f713ad3c6a7cd92c8dc3e2b46820cf8c 361 SUPERFAMILY SSF53067 202 359 1.5E-15 T 22-04-2016 RPIC12D_RS14540 f713ad3c6a7cd92c8dc3e2b46820cf8c 361 PIRSF PIRSF019169 3 361 2.0E-90 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM RPIC12D_RS14540 f713ad3c6a7cd92c8dc3e2b46820cf8c 361 Gene3D G3DSA:3.30.420.40 208 322 3.8E-14 T 22-04-2016 RPIC12D_RS14540 f713ad3c6a7cd92c8dc3e2b46820cf8c 361 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 13 360 2.3E-64 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM RPIC12D_RS14540 f713ad3c6a7cd92c8dc3e2b46820cf8c 361 SUPERFAMILY SSF53067 14 178 1.57E-11 T 22-04-2016 RPIC12D_RS14540 f713ad3c6a7cd92c8dc3e2b46820cf8c 361 PANTHER PTHR32432 1 361 5.4E-34 T 22-04-2016 RPIC12D_RS03230 26fd60a0255fa531c1fadfc904de0bfc 410 PANTHER PTHR11360:SF126 6 399 1.0E-81 T 22-04-2016 RPIC12D_RS03230 26fd60a0255fa531c1fadfc904de0bfc 410 PANTHER PTHR11360 6 399 1.0E-81 T 22-04-2016 RPIC12D_RS03230 26fd60a0255fa531c1fadfc904de0bfc 410 SUPERFAMILY SSF103473 7 397 4.97E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS03230 26fd60a0255fa531c1fadfc904de0bfc 410 Gene3D G3DSA:1.20.1250.20 11 189 6.7E-14 T 22-04-2016 RPIC12D_RS03230 26fd60a0255fa531c1fadfc904de0bfc 410 Gene3D G3DSA:1.20.1250.20 214 391 3.3E-12 T 22-04-2016 RPIC12D_RS03230 26fd60a0255fa531c1fadfc904de0bfc 410 Pfam PF07690 Major Facilitator Superfamily 20 277 6.7E-14 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS05175 ab8268f10f50c685d110b27c0d14a462 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.5E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS05175 ab8268f10f50c685d110b27c0d14a462 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.5E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS05175 ab8268f10f50c685d110b27c0d14a462 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.5E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS05175 ab8268f10f50c685d110b27c0d14a462 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.5E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS05175 ab8268f10f50c685d110b27c0d14a462 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 190 0.006 T 22-04-2016 RPIC12D_RS05175 ab8268f10f50c685d110b27c0d14a462 257 PANTHER PTHR24322 159 191 2.3E-79 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS05175 ab8268f10f50c685d110b27c0d14a462 257 PANTHER PTHR24322 13 143 2.3E-79 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS05175 ab8268f10f50c685d110b27c0d14a462 257 Gene3D G3DSA:3.40.50.720 5 256 2.3E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS05175 ab8268f10f50c685d110b27c0d14a462 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 255 3.2E-41 T 22-04-2016 RPIC12D_RS05175 ab8268f10f50c685d110b27c0d14a462 257 PANTHER PTHR24322:SF456 159 191 2.3E-79 T 22-04-2016 RPIC12D_RS05175 ab8268f10f50c685d110b27c0d14a462 257 PANTHER PTHR24322:SF456 13 143 2.3E-79 T 22-04-2016 RPIC12D_RS05175 ab8268f10f50c685d110b27c0d14a462 257 SUPERFAMILY SSF51735 5 255 4.29E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS19115 eefeefde9126232de9e074a91c6e053e 286 Pfam PF00664 ABC transporter transmembrane region 53 284 1.3E-35 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC12D_RS19115 eefeefde9126232de9e074a91c6e053e 286 PANTHER PTHR24221:SF250 34 285 5.8E-108 T 22-04-2016 RPIC12D_RS19115 eefeefde9126232de9e074a91c6e053e 286 Gene3D G3DSA:1.20.1560.10 38 285 1.3E-51 T 22-04-2016 RPIC12D_RS19115 eefeefde9126232de9e074a91c6e053e 286 SUPERFAMILY SSF90123 38 285 1.31E-49 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC12D_RS19115 eefeefde9126232de9e074a91c6e053e 286 PANTHER PTHR24221 34 285 5.8E-108 T 22-04-2016 RPIC12D_RS17090 c98ce0d6ae9ccca62d78a5a1105e92dd 327 Gene3D G3DSA:3.40.50.720 2 194 5.0E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS17090 c98ce0d6ae9ccca62d78a5a1105e92dd 327 PANTHER PTHR10366 2 325 4.1E-91 T 22-04-2016 RPIC12D_RS17090 c98ce0d6ae9ccca62d78a5a1105e92dd 327 Gene3D G3DSA:3.90.25.10 195 306 3.4E-41 T 22-04-2016 RPIC12D_RS17090 c98ce0d6ae9ccca62d78a5a1105e92dd 327 SUPERFAMILY SSF51735 1 323 1.39E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS17090 c98ce0d6ae9ccca62d78a5a1105e92dd 327 PANTHER PTHR10366:SF228 2 325 4.1E-91 T 22-04-2016 RPIC12D_RS17090 c98ce0d6ae9ccca62d78a5a1105e92dd 327 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 210 1.3E-20 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RPIC12D_RS14455 a75558895a3c22ab5c2c3a8a06487493 211 Gene3D G3DSA:1.10.10.640 173 209 1.2E-29 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical RPIC12D_RS14455 a75558895a3c22ab5c2c3a8a06487493 211 Gene3D G3DSA:1.10.10.640 75 115 1.2E-29 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical RPIC12D_RS14455 a75558895a3c22ab5c2c3a8a06487493 211 PANTHER PTHR36573 4 211 4.4E-35 T 22-04-2016 RPIC12D_RS14455 a75558895a3c22ab5c2c3a8a06487493 211 Pfam PF05494 MlaC protein 37 199 2.9E-51 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RPIC12D_RS14455 a75558895a3c22ab5c2c3a8a06487493 211 PIRSF PIRSF004649 1 211 9.9E-46 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RPIC12D_RS14455 a75558895a3c22ab5c2c3a8a06487493 211 Gene3D G3DSA:3.10.450.50 30 74 5.0E-35 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS14455 a75558895a3c22ab5c2c3a8a06487493 211 Gene3D G3DSA:3.10.450.50 118 172 5.0E-35 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS06740 f24793819aca2c5d09c7465af2a221d6 247 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 224 39.782 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS06740 f24793819aca2c5d09c7465af2a221d6 247 PANTHER PTHR12534 3 229 2.9E-108 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS06740 f24793819aca2c5d09c7465af2a221d6 247 SUPERFAMILY SSF52313 5 230 2.49E-91 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain RPIC12D_RS06740 f24793819aca2c5d09c7465af2a221d6 247 PRINTS PR00395 Ribosomal protein S2 signature 86 103 7.3E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06740 f24793819aca2c5d09c7465af2a221d6 247 PRINTS PR00395 Ribosomal protein S2 signature 5 23 7.3E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06740 f24793819aca2c5d09c7465af2a221d6 247 PRINTS PR00395 Ribosomal protein S2 signature 36 45 7.3E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06740 f24793819aca2c5d09c7465af2a221d6 247 PRINTS PR00395 Ribosomal protein S2 signature 174 185 7.3E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06740 f24793819aca2c5d09c7465af2a221d6 247 PRINTS PR00395 Ribosomal protein S2 signature 157 174 7.3E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06740 f24793819aca2c5d09c7465af2a221d6 247 PRINTS PR00395 Ribosomal protein S2 signature 195 209 7.3E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06740 f24793819aca2c5d09c7465af2a221d6 247 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 8.3E-98 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS06740 f24793819aca2c5d09c7465af2a221d6 247 Gene3D G3DSA:1.10.287.610 99 151 3.9E-22 T 22-04-2016 RPIC12D_RS06740 f24793819aca2c5d09c7465af2a221d6 247 Pfam PF00318 Ribosomal protein S2 8 223 5.9E-91 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06740 f24793819aca2c5d09c7465af2a221d6 247 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 5 16 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS06740 f24793819aca2c5d09c7465af2a221d6 247 Gene3D G3DSA:3.40.50.10490 22 98 9.3E-61 T 22-04-2016 RPIC12D_RS06740 f24793819aca2c5d09c7465af2a221d6 247 Gene3D G3DSA:3.40.50.10490 157 232 9.3E-61 T 22-04-2016 RPIC12D_RS20380 b143b140a33129544e3d381c08bd07c2 204 Gene3D G3DSA:1.10.460.10 48 107 3.4E-24 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RPIC12D_RS20380 b143b140a33129544e3d381c08bd07c2 204 Gene3D G3DSA:1.10.460.10 162 193 3.4E-24 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RPIC12D_RS20380 b143b140a33129544e3d381c08bd07c2 204 Gene3D G3DSA:3.40.50.140 1 43 5.0E-9 T 22-04-2016 IPR006171 Toprim domain RPIC12D_RS20380 b143b140a33129544e3d381c08bd07c2 204 Pfam PF01131 DNA topoisomerase 48 204 5.8E-42 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RPIC12D_RS20380 b143b140a33129544e3d381c08bd07c2 204 SMART SM00436 18 113 1.5E-33 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 RPIC12D_RS20380 b143b140a33129544e3d381c08bd07c2 204 PANTHER PTHR11390 1 204 6.6E-55 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS20380 b143b140a33129544e3d381c08bd07c2 204 SUPERFAMILY SSF56712 1 204 8.5E-59 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain RPIC12D_RS00835 66d3da1ffb76c1f22b7d849b5207af0e 231 SUPERFAMILY SSF52833 72 222 8.13E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS00835 66d3da1ffb76c1f22b7d849b5207af0e 231 PRINTS PR01011 Glutathione peroxidase family signature 89 106 7.9E-12 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC12D_RS00835 66d3da1ffb76c1f22b7d849b5207af0e 231 PRINTS PR01011 Glutathione peroxidase family signature 184 193 7.9E-12 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC12D_RS00835 66d3da1ffb76c1f22b7d849b5207af0e 231 PRINTS PR01011 Glutathione peroxidase family signature 124 140 7.9E-12 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC12D_RS00835 66d3da1ffb76c1f22b7d849b5207af0e 231 ProSitePatterns PS00460 Glutathione peroxidases active site. 91 106 - T 22-04-2016 IPR029759 Glutathione peroxidase active site RPIC12D_RS00835 66d3da1ffb76c1f22b7d849b5207af0e 231 Gene3D G3DSA:3.40.30.10 72 223 2.1E-53 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS00835 66d3da1ffb76c1f22b7d849b5207af0e 231 Pfam PF00255 Glutathione peroxidase 73 176 2.1E-30 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC12D_RS00835 66d3da1ffb76c1f22b7d849b5207af0e 231 PANTHER PTHR11592:SF40 71 224 1.1E-63 T 22-04-2016 RPIC12D_RS00835 66d3da1ffb76c1f22b7d849b5207af0e 231 PANTHER PTHR11592 71 224 1.1E-63 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC12D_RS10840 79dbc2b2c011eba2d22295b5158e014e 208 SUPERFAMILY SSF53335 1 159 2.56E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS10840 79dbc2b2c011eba2d22295b5158e014e 208 PANTHER PTHR10108 3 138 1.1E-17 T 22-04-2016 RPIC12D_RS10840 79dbc2b2c011eba2d22295b5158e014e 208 Gene3D G3DSA:3.40.50.150 3 135 6.1E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS10840 79dbc2b2c011eba2d22295b5158e014e 208 PANTHER PTHR10108:SF779 3 138 1.1E-17 T 22-04-2016 RPIC12D_RS10840 79dbc2b2c011eba2d22295b5158e014e 208 Pfam PF13649 Methyltransferase domain 41 130 3.3E-15 T 22-04-2016 RPIC12D_RS02510 c9b60fd1f29d1f48fcf357b9dcd5e642 171 SMART SM00347 53 153 1.6E-19 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS02510 c9b60fd1f29d1f48fcf357b9dcd5e642 171 SUPERFAMILY SSF46785 27 165 8.62E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS02510 c9b60fd1f29d1f48fcf357b9dcd5e642 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 77 93 1.1E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS02510 c9b60fd1f29d1f48fcf357b9dcd5e642 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 129 1.1E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS02510 c9b60fd1f29d1f48fcf357b9dcd5e642 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 109 1.1E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS02510 c9b60fd1f29d1f48fcf357b9dcd5e642 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 143 163 1.1E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS02510 c9b60fd1f29d1f48fcf357b9dcd5e642 171 Pfam PF01047 MarR family 60 117 2.9E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS02510 c9b60fd1f29d1f48fcf357b9dcd5e642 171 PANTHER PTHR33164 5 164 1.7E-26 T 22-04-2016 RPIC12D_RS02510 c9b60fd1f29d1f48fcf357b9dcd5e642 171 Gene3D G3DSA:1.10.10.10 29 164 1.5E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS04545 b83de7a8fad9e8ad73324c086dc653af 393 PANTHER PTHR30158 1 380 1.9E-139 T 22-04-2016 RPIC12D_RS04545 b83de7a8fad9e8ad73324c086dc653af 393 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 298 1.4E-12 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RPIC12D_RS04545 b83de7a8fad9e8ad73324c086dc653af 393 Gene3D G3DSA:2.40.50.100 177 211 9.5E-22 T 22-04-2016 RPIC12D_RS04545 b83de7a8fad9e8ad73324c086dc653af 393 Gene3D G3DSA:2.40.50.100 69 102 9.5E-22 T 22-04-2016 RPIC12D_RS04545 b83de7a8fad9e8ad73324c086dc653af 393 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 379 3.8E-74 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RPIC12D_RS04545 b83de7a8fad9e8ad73324c086dc653af 393 SUPERFAMILY SSF111369 57 303 2.09E-71 T 22-04-2016 RPIC12D_RS04545 b83de7a8fad9e8ad73324c086dc653af 393 PANTHER PTHR30158:SF7 1 380 1.9E-139 T 22-04-2016 RPIC12D_RS16970 f0bc0cea12af802f5d48b43740ee00fd 178 Pfam PF00227 Proteasome subunit 5 176 6.3E-23 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 RPIC12D_RS16970 f0bc0cea12af802f5d48b43740ee00fd 178 PIRSF PIRSF039093 1 178 1.1E-84 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RPIC12D_RS16970 f0bc0cea12af802f5d48b43740ee00fd 178 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 177 40.574 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RPIC12D_RS16970 f0bc0cea12af802f5d48b43740ee00fd 178 PANTHER PTHR32194 1 178 2.9E-117 T 22-04-2016 RPIC12D_RS16970 f0bc0cea12af802f5d48b43740ee00fd 178 SUPERFAMILY SSF56235 3 177 4.89E-57 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS16970 f0bc0cea12af802f5d48b43740ee00fd 178 Gene3D G3DSA:3.60.20.10 7 178 6.9E-82 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS16970 f0bc0cea12af802f5d48b43740ee00fd 178 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 177 1.7E-82 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RPIC12D_RS07410 e8a39593c6f0dca55d556c49896ab647 308 Pfam PF00561 alpha/beta hydrolase fold 34 295 2.5E-25 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS07410 e8a39593c6f0dca55d556c49896ab647 308 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 2.7E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS07410 e8a39593c6f0dca55d556c49896ab647 308 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 2.7E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS07410 e8a39593c6f0dca55d556c49896ab647 308 PRINTS PR00111 Alpha/beta hydrolase fold signature 59 74 2.7E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS07410 e8a39593c6f0dca55d556c49896ab647 308 SUPERFAMILY SSF53474 13 307 8.74E-68 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS07410 e8a39593c6f0dca55d556c49896ab647 308 PRINTS PR00412 Epoxide hydrolase signature 284 306 1.8E-17 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC12D_RS07410 e8a39593c6f0dca55d556c49896ab647 308 PRINTS PR00412 Epoxide hydrolase signature 119 132 1.8E-17 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC12D_RS07410 e8a39593c6f0dca55d556c49896ab647 308 PRINTS PR00412 Epoxide hydrolase signature 105 118 1.8E-17 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC12D_RS07410 e8a39593c6f0dca55d556c49896ab647 308 PRINTS PR00412 Epoxide hydrolase signature 40 58 1.8E-17 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC12D_RS07410 e8a39593c6f0dca55d556c49896ab647 308 PRINTS PR00412 Epoxide hydrolase signature 251 267 1.8E-17 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC12D_RS07410 e8a39593c6f0dca55d556c49896ab647 308 PANTHER PTHR10992 250 306 2.4E-82 T 22-04-2016 RPIC12D_RS07410 e8a39593c6f0dca55d556c49896ab647 308 PANTHER PTHR10992 11 177 2.4E-82 T 22-04-2016 RPIC12D_RS07410 e8a39593c6f0dca55d556c49896ab647 308 PANTHER PTHR10992 193 232 2.4E-82 T 22-04-2016 RPIC12D_RS07410 e8a39593c6f0dca55d556c49896ab647 308 PANTHER PTHR10992:SF793 250 306 2.4E-82 T 22-04-2016 RPIC12D_RS07410 e8a39593c6f0dca55d556c49896ab647 308 PANTHER PTHR10992:SF793 11 177 2.4E-82 T 22-04-2016 RPIC12D_RS07410 e8a39593c6f0dca55d556c49896ab647 308 PANTHER PTHR10992:SF793 193 232 2.4E-82 T 22-04-2016 RPIC12D_RS07410 e8a39593c6f0dca55d556c49896ab647 308 Gene3D G3DSA:3.40.50.1820 10 307 1.1E-78 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 Pfam PF01751 Toprim domain 451 563 1.6E-18 T 22-04-2016 IPR006171 Toprim domain RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 17 842 7.9E-288 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR00418 DNA topoisomerase II family signature 557 569 4.6E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR00418 DNA topoisomerase II family signature 452 466 4.6E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR00418 DNA topoisomerase II family signature 82 95 4.6E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR00418 DNA topoisomerase II family signature 519 535 4.6E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR00418 DNA topoisomerase II family signature 129 143 4.6E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR00418 DNA topoisomerase II family signature 47 62 4.6E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR00418 DNA topoisomerase II family signature 537 554 4.6E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR00418 DNA topoisomerase II family signature 300 313 4.6E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR00418 DNA topoisomerase II family signature 774 790 4.6E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 SUPERFAMILY SSF56719 768 832 8.37E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 SUPERFAMILY SSF56719 426 592 8.37E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 SUPERFAMILY SSF54211 253 424 2.85E-58 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 SMART SM00387 43 208 2.3E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 771 831 1.0E-28 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 SUPERFAMILY SSF55874 17 248 2.88E-63 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PANTHER PTHR10169 15 166 9.0E-286 T 22-04-2016 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PANTHER PTHR10169 184 585 9.0E-286 T 22-04-2016 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PANTHER PTHR10169 762 842 9.0E-286 T 22-04-2016 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 44 207 1.2E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 406 426 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 795 807 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 252 274 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 228 241 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 502 511 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 392 406 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 344 360 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 213 228 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 811 827 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 17 27 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 14 842 99.026 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 Gene3D G3DSA:3.40.50.670 436 582 7.6E-100 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 Gene3D G3DSA:3.40.50.670 756 824 7.6E-100 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 SMART SM00433 47 835 2.7E-247 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 Gene3D G3DSA:3.30.230.10 252 424 2.9E-73 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 ProSitePatterns PS00177 DNA topoisomerase II signature. 454 462 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 Pfam PF00204 DNA gyrase B 253 422 5.9E-56 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 Gene3D G3DSA:3.30.565.10 17 250 8.2E-91 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS12380 cd8ca8a4ed727a99c6636fb530106977 411 Hamap MF_00372 Imidazolonepropionase [hutI]. 10 410 43.898 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC12D_RS12380 cd8ca8a4ed727a99c6636fb530106977 411 Pfam PF01979 Amidohydrolase family 69 409 5.3E-20 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RPIC12D_RS12380 cd8ca8a4ed727a99c6636fb530106977 411 Gene3D G3DSA:2.30.40.10 27 77 3.2E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS12380 cd8ca8a4ed727a99c6636fb530106977 411 SUPERFAMILY SSF51556 71 370 6.06E-90 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC12D_RS12380 cd8ca8a4ed727a99c6636fb530106977 411 Gene3D G3DSA:2.30.40.10 356 390 3.2E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS12380 cd8ca8a4ed727a99c6636fb530106977 411 Gene3D G3DSA:3.20.20.140 78 355 8.6E-46 T 22-04-2016 RPIC12D_RS12380 cd8ca8a4ed727a99c6636fb530106977 411 PANTHER PTHR22642 36 409 1.9E-140 T 22-04-2016 RPIC12D_RS12380 cd8ca8a4ed727a99c6636fb530106977 411 TIGRFAM TIGR01224 hutI: imidazolonepropionase 32 409 2.3E-144 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC12D_RS12380 cd8ca8a4ed727a99c6636fb530106977 411 PANTHER PTHR22642:SF1 36 409 1.9E-140 T 22-04-2016 RPIC12D_RS12380 cd8ca8a4ed727a99c6636fb530106977 411 SUPERFAMILY SSF51338 8 71 1.07E-28 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS12380 cd8ca8a4ed727a99c6636fb530106977 411 SUPERFAMILY SSF51338 372 409 1.07E-28 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS05350 048027a96c87c54d0951e9b6a3513789 96 Pfam PF07045 Domain of unknown function (DUF1330) 4 96 2.1E-35 T 22-04-2016 IPR010753 Domain of unknown function DUF1330 RPIC12D_RS05350 048027a96c87c54d0951e9b6a3513789 96 PANTHER PTHR41521 1 96 9.7E-17 T 22-04-2016 RPIC12D_RS05350 048027a96c87c54d0951e9b6a3513789 96 Gene3D G3DSA:3.30.70.900 1 96 3.8E-34 T 22-04-2016 RPIC12D_RS05350 048027a96c87c54d0951e9b6a3513789 96 SUPERFAMILY SSF54909 1 96 1.61E-29 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC12D_RS06020 57b4254852986b6790884999448fdfb3 485 Gene3D G3DSA:1.20.210.10 11 471 9.1E-74 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS06020 57b4254852986b6790884999448fdfb3 485 PANTHER PTHR10422 8 467 7.8E-294 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS06020 57b4254852986b6790884999448fdfb3 485 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 12 477 7.6E-236 T 22-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS06020 57b4254852986b6790884999448fdfb3 485 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 207 262 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS06020 57b4254852986b6790884999448fdfb3 485 PANTHER PTHR10422:SF21 8 467 7.8E-294 T 22-04-2016 RPIC12D_RS06020 57b4254852986b6790884999448fdfb3 485 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 16 446 4.1E-120 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS06020 57b4254852986b6790884999448fdfb3 485 SUPERFAMILY SSF81442 14 471 8.9E-128 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS12950 c36e8a8ae84b960d8c992342991039cc 511 Gene3D G3DSA:3.40.50.300 3 224 2.1E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12950 c36e8a8ae84b960d8c992342991039cc 511 SUPERFAMILY SSF52540 4 223 2.61E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12950 c36e8a8ae84b960d8c992342991039cc 511 PANTHER PTHR24220:SF516 6 378 5.5E-153 T 22-04-2016 RPIC12D_RS12950 c36e8a8ae84b960d8c992342991039cc 511 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS12950 c36e8a8ae84b960d8c992342991039cc 511 PANTHER PTHR24220 6 378 5.5E-153 T 22-04-2016 RPIC12D_RS12950 c36e8a8ae84b960d8c992342991039cc 511 SUPERFAMILY SSF52540 269 484 4.66E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12950 c36e8a8ae84b960d8c992342991039cc 511 SMART SM00382 278 474 4.4E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS12950 c36e8a8ae84b960d8c992342991039cc 511 SMART SM00382 29 224 2.8E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS12950 c36e8a8ae84b960d8c992342991039cc 511 Gene3D G3DSA:3.40.50.300 268 487 4.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12950 c36e8a8ae84b960d8c992342991039cc 511 Pfam PF00005 ABC transporter 272 425 1.7E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS12950 c36e8a8ae84b960d8c992342991039cc 511 Pfam PF00005 ABC transporter 20 169 9.3E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS08615 014291da19df4e56e55a7308b7bc4686 512 Pfam PF02541 Ppx/GppA phosphatase family 42 316 3.8E-68 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 RPIC12D_RS08615 014291da19df4e56e55a7308b7bc4686 512 PANTHER PTHR30005:SF4 1 510 5.7E-134 T 22-04-2016 RPIC12D_RS08615 014291da19df4e56e55a7308b7bc4686 512 Gene3D G3DSA:3.30.420.40 4 136 1.5E-40 T 22-04-2016 RPIC12D_RS08615 014291da19df4e56e55a7308b7bc4686 512 PIRSF PIRSF001267 1 512 2.3E-195 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 RPIC12D_RS08615 014291da19df4e56e55a7308b7bc4686 512 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 8 315 4.7E-95 T 22-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 RPIC12D_RS08615 014291da19df4e56e55a7308b7bc4686 512 Gene3D G3DSA:3.30.420.150 141 320 7.8E-52 T 22-04-2016 RPIC12D_RS08615 014291da19df4e56e55a7308b7bc4686 512 SUPERFAMILY SSF109604 322 510 8.27E-43 T 22-04-2016 RPIC12D_RS08615 014291da19df4e56e55a7308b7bc4686 512 SUPERFAMILY SSF53067 7 135 4.34E-30 T 22-04-2016 RPIC12D_RS08615 014291da19df4e56e55a7308b7bc4686 512 PANTHER PTHR30005 1 510 5.7E-134 T 22-04-2016 RPIC12D_RS08615 014291da19df4e56e55a7308b7bc4686 512 SUPERFAMILY SSF53067 142 319 4.83E-42 T 22-04-2016 RPIC12D_RS11185 45ecc54c2976eb8d43e63f6508c00b17 435 Gene3D G3DSA:2.40.30.10 329 433 9.4E-11 T 22-04-2016 RPIC12D_RS11185 45ecc54c2976eb8d43e63f6508c00b17 435 Pfam PF03144 Elongation factor Tu domain 2 260 319 2.3E-7 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RPIC12D_RS11185 45ecc54c2976eb8d43e63f6508c00b17 435 Gene3D G3DSA:3.40.50.300 4 225 1.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11185 45ecc54c2976eb8d43e63f6508c00b17 435 SUPERFAMILY SSF50447 234 322 8.52E-18 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC12D_RS11185 45ecc54c2976eb8d43e63f6508c00b17 435 PANTHER PTHR23115 12 320 9.8E-60 T 22-04-2016 RPIC12D_RS11185 45ecc54c2976eb8d43e63f6508c00b17 435 Gene3D G3DSA:2.40.30.10 234 321 5.7E-18 T 22-04-2016 RPIC12D_RS11185 45ecc54c2976eb8d43e63f6508c00b17 435 PRINTS PR00315 GTP-binding elongation factor signature 108 119 4.1E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS11185 45ecc54c2976eb8d43e63f6508c00b17 435 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.1E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS11185 45ecc54c2976eb8d43e63f6508c00b17 435 PRINTS PR00315 GTP-binding elongation factor signature 153 162 4.1E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS11185 45ecc54c2976eb8d43e63f6508c00b17 435 PRINTS PR00315 GTP-binding elongation factor signature 72 80 4.1E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS11185 45ecc54c2976eb8d43e63f6508c00b17 435 PRINTS PR00315 GTP-binding elongation factor signature 92 102 4.1E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS11185 45ecc54c2976eb8d43e63f6508c00b17 435 SUPERFAMILY SSF50465 330 432 1.34E-31 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RPIC12D_RS11185 45ecc54c2976eb8d43e63f6508c00b17 435 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 11 431 1.0E-158 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 RPIC12D_RS11185 45ecc54c2976eb8d43e63f6508c00b17 435 SUPERFAMILY SSF52540 9 224 2.76E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11185 45ecc54c2976eb8d43e63f6508c00b17 435 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 65 80 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RPIC12D_RS11185 45ecc54c2976eb8d43e63f6508c00b17 435 Pfam PF00009 Elongation factor Tu GTP binding domain 11 204 2.6E-36 T 22-04-2016 RPIC12D_RS10405 665339d9e91d7f7c3a1e02f0344a4d8b 229 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 2 220 1.4E-117 T 22-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 RPIC12D_RS10405 665339d9e91d7f7c3a1e02f0344a4d8b 229 SMART SM00882 6 219 2.9E-83 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC12D_RS10405 665339d9e91d7f7c3a1e02f0344a4d8b 229 Gene3D G3DSA:3.40.1080.10 4 218 4.1E-88 T 22-04-2016 RPIC12D_RS10405 665339d9e91d7f7c3a1e02f0344a4d8b 229 SUPERFAMILY SSF100950 2 219 9.77E-79 T 22-04-2016 RPIC12D_RS10405 665339d9e91d7f7c3a1e02f0344a4d8b 229 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 22-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 RPIC12D_RS10405 665339d9e91d7f7c3a1e02f0344a4d8b 229 PANTHER PTHR13707 1 218 1.4E-95 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC12D_RS10405 665339d9e91d7f7c3a1e02f0344a4d8b 229 Pfam PF01144 Coenzyme A transferase 9 218 2.9E-69 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC12D_RS03110 a13b6770a6a3906e755e38818c0c5ab2 476 Pfam PF13091 PLD-like domain 128 270 2.0E-18 T 22-04-2016 IPR025202 Phospholipase D-like domain RPIC12D_RS03110 a13b6770a6a3906e755e38818c0c5ab2 476 Pfam PF13091 PLD-like domain 319 442 5.3E-29 T 22-04-2016 IPR025202 Phospholipase D-like domain RPIC12D_RS03110 a13b6770a6a3906e755e38818c0c5ab2 476 Pfam PF13396 Phospholipase_D-nuclease N-terminal 28 58 2.7E-6 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal RPIC12D_RS03110 a13b6770a6a3906e755e38818c0c5ab2 476 PANTHER PTHR21248:SF5 17 476 3.8E-96 T 22-04-2016 RPIC12D_RS03110 a13b6770a6a3906e755e38818c0c5ab2 476 Gene3D G3DSA:3.30.870.10 315 450 4.3E-33 T 22-04-2016 RPIC12D_RS03110 a13b6770a6a3906e755e38818c0c5ab2 476 SMART SM00155 389 416 3.8E-4 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RPIC12D_RS03110 a13b6770a6a3906e755e38818c0c5ab2 476 SMART SM00155 210 237 0.0016 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RPIC12D_RS03110 a13b6770a6a3906e755e38818c0c5ab2 476 SUPERFAMILY SSF56024 292 462 1.88E-41 T 22-04-2016 RPIC12D_RS03110 a13b6770a6a3906e755e38818c0c5ab2 476 SUPERFAMILY SSF56024 77 307 2.25E-50 T 22-04-2016 RPIC12D_RS03110 a13b6770a6a3906e755e38818c0c5ab2 476 Gene3D G3DSA:3.30.870.10 107 306 2.5E-47 T 22-04-2016 RPIC12D_RS03110 a13b6770a6a3906e755e38818c0c5ab2 476 PANTHER PTHR21248 17 476 3.8E-96 T 22-04-2016 RPIC12D_RS03110 a13b6770a6a3906e755e38818c0c5ab2 476 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 27 476 9.4E-91 T 22-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 RPIC12D_RS03000 a6197f60c409bb3c0d690bc6364d5b1e 220 Pfam PF03724 META domain 97 209 1.7E-22 T 22-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ RPIC12D_RS00260 d22b2c41b4eeb30ef2b0eb07a1ea7760 324 PANTHER PTHR32347:SF15 20 323 2.6E-65 T 22-04-2016 RPIC12D_RS00260 d22b2c41b4eeb30ef2b0eb07a1ea7760 324 PANTHER PTHR32347 20 323 2.6E-65 T 22-04-2016 RPIC12D_RS00260 d22b2c41b4eeb30ef2b0eb07a1ea7760 324 SUPERFAMILY SSF111369 142 262 1.57E-6 T 22-04-2016 RPIC12D_RS00260 d22b2c41b4eeb30ef2b0eb07a1ea7760 324 Gene3D G3DSA:2.40.50.100 202 234 8.6E-8 T 22-04-2016 RPIC12D_RS00260 d22b2c41b4eeb30ef2b0eb07a1ea7760 324 Gene3D G3DSA:2.40.50.100 43 75 8.6E-8 T 22-04-2016 RPIC12D_RS00260 d22b2c41b4eeb30ef2b0eb07a1ea7760 324 Pfam PF13533 Biotin-lipoyl like 43 90 1.3E-8 T 22-04-2016 RPIC12D_RS00260 d22b2c41b4eeb30ef2b0eb07a1ea7760 324 Pfam PF13437 HlyD family secretion protein 206 316 3.4E-15 T 22-04-2016 RPIC12D_RS00260 d22b2c41b4eeb30ef2b0eb07a1ea7760 324 SUPERFAMILY SSF111369 41 123 1.83E-6 T 22-04-2016 RPIC12D_RS08230 5adb8fa617cf623b4aa72745dc9bafc0 312 Pfam PF01263 Aldose 1-epimerase 26 308 8.5E-18 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RPIC12D_RS08230 5adb8fa617cf623b4aa72745dc9bafc0 312 PANTHER PTHR11122:SF14 34 79 1.2E-25 T 22-04-2016 RPIC12D_RS08230 5adb8fa617cf623b4aa72745dc9bafc0 312 PANTHER PTHR11122:SF14 95 312 1.2E-25 T 22-04-2016 RPIC12D_RS08230 5adb8fa617cf623b4aa72745dc9bafc0 312 SUPERFAMILY SSF74650 9 310 4.4E-43 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RPIC12D_RS08230 5adb8fa617cf623b4aa72745dc9bafc0 312 Gene3D G3DSA:2.70.98.10 30 309 1.0E-36 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 RPIC12D_RS08230 5adb8fa617cf623b4aa72745dc9bafc0 312 PANTHER PTHR11122 34 79 1.2E-25 T 22-04-2016 RPIC12D_RS08230 5adb8fa617cf623b4aa72745dc9bafc0 312 PANTHER PTHR11122 95 312 1.2E-25 T 22-04-2016 RPIC12D_RS15760 d9ee3075770b3e56998cf754866651ca 336 Gene3D G3DSA:2.60.120.260 174 334 2.1E-57 T 22-04-2016 IPR008979 Galactose-binding domain-like RPIC12D_RS15760 d9ee3075770b3e56998cf754866651ca 336 Gene3D G3DSA:2.60.120.260 11 172 1.4E-61 T 22-04-2016 IPR008979 Galactose-binding domain-like RPIC12D_RS15760 d9ee3075770b3e56998cf754866651ca 336 SUPERFAMILY SSF49785 179 334 8.08E-56 T 22-04-2016 IPR008979 Galactose-binding domain-like RPIC12D_RS15760 d9ee3075770b3e56998cf754866651ca 336 Hamap MF_00813 Probable allantoicase [alc]. 6 336 57.779 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 RPIC12D_RS15760 d9ee3075770b3e56998cf754866651ca 336 PIRSF PIRSF016516 1 336 2.5E-150 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 RPIC12D_RS15760 d9ee3075770b3e56998cf754866651ca 336 SUPERFAMILY SSF49785 12 173 9.35E-60 T 22-04-2016 IPR008979 Galactose-binding domain-like RPIC12D_RS15760 d9ee3075770b3e56998cf754866651ca 336 Pfam PF03561 Allantoicase repeat 193 333 5.1E-47 T 22-04-2016 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 RPIC12D_RS15760 d9ee3075770b3e56998cf754866651ca 336 Pfam PF03561 Allantoicase repeat 26 170 5.0E-47 T 22-04-2016 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 RPIC12D_RS15760 d9ee3075770b3e56998cf754866651ca 336 PANTHER PTHR12045 9 335 3.8E-139 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 RPIC12D_RS15760 d9ee3075770b3e56998cf754866651ca 336 TIGRFAM TIGR02961 allantoicase: allantoicase 17 333 1.6E-140 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 RPIC12D_RS06405 a14b516abe48c076d652d977df29ac43 207 SUPERFAMILY SSF52218 1 168 1.32E-31 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC12D_RS06405 a14b516abe48c076d652d977df29ac43 207 Pfam PF03358 NADPH-dependent FMN reductase 1 142 6.6E-34 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RPIC12D_RS06405 a14b516abe48c076d652d977df29ac43 207 Gene3D G3DSA:3.40.50.360 1 175 2.2E-32 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC12D_RS06405 a14b516abe48c076d652d977df29ac43 207 PANTHER PTHR30543 1 191 5.8E-34 T 22-04-2016 RPIC12D_RS06405 a14b516abe48c076d652d977df29ac43 207 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 2 171 3.1E-70 T 22-04-2016 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 RPIC12D_RS13720 7a0682551cc1c9e93cd2557c6619c5a7 318 PANTHER PTHR10584:SF170 6 317 2.7E-89 T 22-04-2016 RPIC12D_RS13720 7a0682551cc1c9e93cd2557c6619c5a7 318 Pfam PF00294 pfkB family carbohydrate kinase 22 299 2.4E-50 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB RPIC12D_RS13720 7a0682551cc1c9e93cd2557c6619c5a7 318 PANTHER PTHR10584 6 317 2.7E-89 T 22-04-2016 RPIC12D_RS13720 7a0682551cc1c9e93cd2557c6619c5a7 318 Gene3D G3DSA:3.40.1190.20 41 317 7.1E-77 T 22-04-2016 IPR029056 Ribokinase-like RPIC12D_RS13720 7a0682551cc1c9e93cd2557c6619c5a7 318 SUPERFAMILY SSF53613 7 303 6.55E-67 T 22-04-2016 IPR029056 Ribokinase-like RPIC12D_RS13720 7a0682551cc1c9e93cd2557c6619c5a7 318 PIRSF PIRSF000535 4 317 1.5E-83 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 RPIC12D_RS13720 7a0682551cc1c9e93cd2557c6619c5a7 318 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 255 268 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RPIC12D_RS13720 7a0682551cc1c9e93cd2557c6619c5a7 318 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 7 314 9.8E-94 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 RPIC12D_RS13720 7a0682551cc1c9e93cd2557c6619c5a7 318 Gene3D G3DSA:2.20.150.10 14 40 4.5E-8 T 22-04-2016 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 RPIC12D_RS13720 7a0682551cc1c9e93cd2557c6619c5a7 318 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 7 313 1.2E-93 T 22-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 RPIC12D_RS25915 93c672cd5ef0054f2412076f6091c658 128 SUPERFAMILY SSF56935 1 126 1.03E-29 T 22-04-2016 RPIC12D_RS25915 93c672cd5ef0054f2412076f6091c658 128 Gene3D G3DSA:2.40.170.20 1 126 1.0E-43 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS25915 93c672cd5ef0054f2412076f6091c658 128 PANTHER PTHR32552:SF8 1 125 1.6E-38 T 22-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 RPIC12D_RS25915 93c672cd5ef0054f2412076f6091c658 128 Pfam PF00593 TonB dependent receptor 1 121 3.9E-18 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS25915 93c672cd5ef0054f2412076f6091c658 128 PANTHER PTHR32552 1 125 1.6E-38 T 22-04-2016 RPIC12D_RS16715 e625e858b44dbdf8eb623f262452102d 114 PANTHER PTHR37309 1 112 2.9E-29 T 22-04-2016 RPIC12D_RS16715 e625e858b44dbdf8eb623f262452102d 114 PANTHER PTHR37309:SF1 1 112 2.9E-29 T 22-04-2016 RPIC12D_RS16715 e625e858b44dbdf8eb623f262452102d 114 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 105 1.5E-31 T 22-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV RPIC12D_RS09925 f705b07706d46302621874efdec761a0 215 SUPERFAMILY SSF53182 1 215 1.83E-73 T 22-04-2016 RPIC12D_RS09925 f705b07706d46302621874efdec761a0 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 215 4.8E-92 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 RPIC12D_RS09925 f705b07706d46302621874efdec761a0 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 162 174 4.0E-47 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RPIC12D_RS09925 f705b07706d46302621874efdec761a0 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 4.0E-47 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RPIC12D_RS09925 f705b07706d46302621874efdec761a0 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 4.0E-47 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RPIC12D_RS09925 f705b07706d46302621874efdec761a0 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 4.0E-47 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RPIC12D_RS09925 f705b07706d46302621874efdec761a0 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 4.0E-47 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RPIC12D_RS09925 f705b07706d46302621874efdec761a0 215 Gene3D G3DSA:3.40.630.20 2 212 5.7E-70 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RPIC12D_RS09925 f705b07706d46302621874efdec761a0 215 PANTHER PTHR23402 1 214 3.0E-71 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RPIC12D_RS09925 f705b07706d46302621874efdec761a0 215 Pfam PF01470 Pyroglutamyl peptidase 4 202 2.3E-84 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RPIC12D_RS09925 f705b07706d46302621874efdec761a0 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 201 40.805 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 RPIC12D_RS09925 f705b07706d46302621874efdec761a0 215 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RPIC12D_RS09925 f705b07706d46302621874efdec761a0 215 PIRSF PIRSF015592 1 213 3.3E-85 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RPIC12D_RS09925 f705b07706d46302621874efdec761a0 215 PANTHER PTHR23402:SF1 1 214 3.0E-71 T 22-04-2016 RPIC12D_RS13870 be977479d0d8ae3433e6db7764c319f1 431 SUPERFAMILY SSF51905 309 426 2.88E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS13870 be977479d0d8ae3433e6db7764c319f1 431 SUPERFAMILY SSF51905 19 199 2.88E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS13870 be977479d0d8ae3433e6db7764c319f1 431 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 336 349 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 RPIC12D_RS13870 be977479d0d8ae3433e6db7764c319f1 431 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 337 353 4.3E-19 T 22-04-2016 RPIC12D_RS13870 be977479d0d8ae3433e6db7764c319f1 431 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 322 337 4.3E-19 T 22-04-2016 RPIC12D_RS13870 be977479d0d8ae3433e6db7764c319f1 431 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 20 42 4.3E-19 T 22-04-2016 RPIC12D_RS13870 be977479d0d8ae3433e6db7764c319f1 431 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 178 193 4.3E-19 T 22-04-2016 RPIC12D_RS13870 be977479d0d8ae3433e6db7764c319f1 431 PANTHER PTHR13789 246 431 1.6E-79 T 22-04-2016 RPIC12D_RS13870 be977479d0d8ae3433e6db7764c319f1 431 PANTHER PTHR13789 22 229 1.6E-79 T 22-04-2016 RPIC12D_RS13870 be977479d0d8ae3433e6db7764c319f1 431 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 21 431 1.9E-126 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 RPIC12D_RS13870 be977479d0d8ae3433e6db7764c319f1 431 PANTHER PTHR13789:SF5 246 431 1.6E-79 T 22-04-2016 RPIC12D_RS13870 be977479d0d8ae3433e6db7764c319f1 431 PANTHER PTHR13789:SF5 22 229 1.6E-79 T 22-04-2016 RPIC12D_RS13870 be977479d0d8ae3433e6db7764c319f1 431 Pfam PF01494 FAD binding domain 22 380 2.8E-25 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 RPIC12D_RS13870 be977479d0d8ae3433e6db7764c319f1 431 Gene3D G3DSA:3.50.50.60 310 398 1.9E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS13870 be977479d0d8ae3433e6db7764c319f1 431 Gene3D G3DSA:3.50.50.60 21 91 1.9E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS13870 be977479d0d8ae3433e6db7764c319f1 431 Gene3D G3DSA:3.50.50.60 125 204 1.9E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS04760 64ea18343b2280500580e69d65a9cc33 179 SMART SM00271 9 74 8.9E-7 T 22-04-2016 IPR001623 DnaJ domain RPIC12D_RS04760 64ea18343b2280500580e69d65a9cc33 179 SUPERFAMILY SSF46565 10 82 2.09E-18 T 22-04-2016 IPR001623 DnaJ domain RPIC12D_RS04760 64ea18343b2280500580e69d65a9cc33 179 SUPERFAMILY SSF47144 85 179 3.66E-24 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 RPIC12D_RS04760 64ea18343b2280500580e69d65a9cc33 179 Pfam PF00226 DnaJ domain 11 78 3.7E-7 T 22-04-2016 IPR001623 DnaJ domain RPIC12D_RS04760 64ea18343b2280500580e69d65a9cc33 179 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 21 176 2.9E-31 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 RPIC12D_RS04760 64ea18343b2280500580e69d65a9cc33 179 Gene3D G3DSA:1.20.1280.20 89 179 1.3E-27 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 RPIC12D_RS04760 64ea18343b2280500580e69d65a9cc33 179 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 9 178 23.91 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 RPIC12D_RS04760 64ea18343b2280500580e69d65a9cc33 179 PANTHER PTHR14021 8 167 3.8E-44 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 RPIC12D_RS04760 64ea18343b2280500580e69d65a9cc33 179 Pfam PF07743 HSCB C-terminal oligomerisation domain 95 169 3.8E-18 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 RPIC12D_RS04760 64ea18343b2280500580e69d65a9cc33 179 Gene3D G3DSA:1.10.287.110 6 80 2.8E-27 T 22-04-2016 IPR001623 DnaJ domain RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 Gene3D G3DSA:2.70.150.10 186 327 4.6E-31 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 Pfam PF00122 E1-E2 ATPase 196 417 1.5E-67 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 SUPERFAMILY SSF81665 193 229 1.7E-13 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 SUPERFAMILY SSF81665 678 708 1.7E-13 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 SUPERFAMILY SSF81665 327 420 1.7E-13 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 SUPERFAMILY SSF81653 229 326 1.83E-27 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 Pfam PF00702 haloacid dehalogenase-like hydrolase 423 643 5.6E-42 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 PRINTS PR00943 Copper-transporting ATPase signature 215 233 1.2E-8 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 PRINTS PR00943 Copper-transporting ATPase signature 409 424 1.2E-8 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 PRINTS PR00943 Copper-transporting ATPase signature 606 623 1.2E-8 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 PRINTS PR00943 Copper-transporting ATPase signature 195 214 1.2E-8 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 PRINTS PR00943 Copper-transporting ATPase signature 349 363 1.2E-8 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 PRINTS PR00943 Copper-transporting ATPase signature 142 161 1.2E-8 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 SUPERFAMILY SSF55008 8 76 6.15E-19 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 Pfam PF00403 Heavy-metal-associated domain 14 71 2.5E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 525 708 1.0E-41 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 198 451 1.1E-45 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 138 732 1.6E-173 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 Gene3D G3DSA:3.30.70.100 12 75 1.0E-23 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 428 434 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 157 731 2.5E-186 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 652 664 4.5E-26 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 276 290 4.5E-26 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 576 586 4.5E-26 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 426 440 4.5E-26 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 648 4.5E-26 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 Gene3D G3DSA:3.40.50.1000 397 440 2.7E-53 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 Gene3D G3DSA:3.40.50.1000 557 697 2.7E-53 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 PANTHER PTHR24093 13 735 8.2E-256 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 Gene3D G3DSA:3.40.1110.10 441 556 2.4E-14 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 ProSitePatterns PS01047 Heavy-metal-associated domain. 16 45 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 PANTHER PTHR24093:SF332 13 735 8.2E-256 T 22-04-2016 RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 SUPERFAMILY SSF56784 483 729 1.6E-57 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS16130 65dcf7107a5d7b38cb951757f820be06 741 SUPERFAMILY SSF56784 425 444 1.6E-57 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS03995 a2e0627a0a6f2e801066d2ed72450c47 183 PANTHER PTHR38784:SF1 1 182 2.8E-82 T 22-04-2016 RPIC12D_RS03995 a2e0627a0a6f2e801066d2ed72450c47 183 PANTHER PTHR38784 1 182 2.8E-82 T 22-04-2016 RPIC12D_RS03995 a2e0627a0a6f2e801066d2ed72450c47 183 Gene3D G3DSA:3.10.640.10 1 179 3.2E-84 T 22-04-2016 RPIC12D_RS03995 a2e0627a0a6f2e801066d2ed72450c47 183 Pfam PF07152 YaeQ protein 1 173 2.6E-80 T 22-04-2016 IPR009822 YaeQ RPIC12D_RS03995 a2e0627a0a6f2e801066d2ed72450c47 183 SUPERFAMILY SSF52980 2 178 1.9E-74 T 22-04-2016 IPR011335 Restriction endonuclease type II-like RPIC12D_RS03995 a2e0627a0a6f2e801066d2ed72450c47 183 SMART SM01322 1 176 3.1E-122 T 22-04-2016 IPR009822 YaeQ RPIC12D_RS03995 a2e0627a0a6f2e801066d2ed72450c47 183 PIRSF PIRSF011484 1 181 5.1E-76 T 22-04-2016 IPR009822 YaeQ RPIC12D_RS09655 c3da8c69fcec6301c699e76baed1318d 134 SUPERFAMILY SSF46458 13 132 3.5E-35 T 22-04-2016 IPR009050 Globin-like RPIC12D_RS09655 c3da8c69fcec6301c699e76baed1318d 134 Gene3D G3DSA:1.10.490.10 12 132 2.9E-42 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 RPIC12D_RS09655 c3da8c69fcec6301c699e76baed1318d 134 Pfam PF01152 Bacterial-like globin 12 127 4.9E-47 T 22-04-2016 IPR001486 Truncated hemoglobin GO:0019825 RPIC12D_RS09655 c3da8c69fcec6301c699e76baed1318d 134 PANTHER PTHR10681 12 131 1.7E-13 T 22-04-2016 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 Gene3D G3DSA:3.40.228.10 329 408 9.4E-48 T 22-04-2016 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 Gene3D G3DSA:3.40.228.10 182 294 9.4E-48 T 22-04-2016 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 43 95 1.3E-17 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 PANTHER PTHR11615 654 839 0.0 T 22-04-2016 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 PANTHER PTHR11615 41 289 0.0 T 22-04-2016 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 PANTHER PTHR11615 355 607 0.0 T 22-04-2016 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 Gene3D G3DSA:2.20.25.90 39 98 8.1E-21 T 22-04-2016 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 Hamap MF_01630 Nitrate reductase [napA]. 1 839 29.364 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 SUPERFAMILY SSF53706 38 713 8.38E-196 T 22-04-2016 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 Gene3D G3DSA:2.40.40.20 678 839 1.2E-45 T 22-04-2016 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 839 0.0 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 Pfam PF00384 Molybdopterin oxidoreductase 99 579 5.2E-98 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 Gene3D G3DSA:3.40.50.740 409 586 1.5E-78 T 22-04-2016 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 Gene3D G3DSA:3.40.50.740 632 675 1.5E-78 T 22-04-2016 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 Gene3D G3DSA:3.40.50.740 99 181 1.5E-78 T 22-04-2016 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 PANTHER PTHR11615:SF123 654 839 0.0 T 22-04-2016 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 PANTHER PTHR11615:SF123 41 289 0.0 T 22-04-2016 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 PANTHER PTHR11615:SF123 355 607 0.0 T 22-04-2016 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 47 65 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 Pfam PF01568 Molydopterin dinucleotide binding domain 725 833 1.4E-23 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 SUPERFAMILY SSF50692 699 839 2.15E-41 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RPIC12D_RS12210 ef088db8d762b66dfa7be5a936c7a61a 839 SMART SM00926 42 96 9.2E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RPIC12D_RS10350 3a2f9ba4de4f17505b571d4af6e7c50c 325 SUPERFAMILY SSF53850 91 303 5.7E-38 T 22-04-2016 RPIC12D_RS10350 3a2f9ba4de4f17505b571d4af6e7c50c 325 Gene3D G3DSA:3.40.190.10 175 275 5.1E-25 T 22-04-2016 RPIC12D_RS10350 3a2f9ba4de4f17505b571d4af6e7c50c 325 SUPERFAMILY SSF46785 6 83 1.78E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS10350 3a2f9ba4de4f17505b571d4af6e7c50c 325 Gene3D G3DSA:3.40.190.10 91 174 4.2E-31 T 22-04-2016 RPIC12D_RS10350 3a2f9ba4de4f17505b571d4af6e7c50c 325 Gene3D G3DSA:3.40.190.10 279 307 4.2E-31 T 22-04-2016 RPIC12D_RS10350 3a2f9ba4de4f17505b571d4af6e7c50c 325 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 4.3E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS10350 3a2f9ba4de4f17505b571d4af6e7c50c 325 Gene3D G3DSA:1.10.10.10 4 85 1.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS10350 3a2f9ba4de4f17505b571d4af6e7c50c 325 Pfam PF03466 LysR substrate binding domain 96 300 1.4E-19 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS10350 3a2f9ba4de4f17505b571d4af6e7c50c 325 PANTHER PTHR30118:SF8 1 313 5.3E-94 T 22-04-2016 RPIC12D_RS10350 3a2f9ba4de4f17505b571d4af6e7c50c 325 PANTHER PTHR30118 1 313 5.3E-94 T 22-04-2016 RPIC12D_RS10350 3a2f9ba4de4f17505b571d4af6e7c50c 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 5.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS10350 3a2f9ba4de4f17505b571d4af6e7c50c 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 5.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS10350 3a2f9ba4de4f17505b571d4af6e7c50c 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 5.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS09035 dfb12117c43a327563e14c8e55f39994 242 Pfam PF01618 MotA/TolQ/ExbB proton channel family 97 206 6.1E-34 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RPIC12D_RS09035 dfb12117c43a327563e14c8e55f39994 242 PANTHER PTHR30625:SF3 22 217 2.1E-44 T 22-04-2016 RPIC12D_RS09035 dfb12117c43a327563e14c8e55f39994 242 PANTHER PTHR30625 22 217 2.1E-44 T 22-04-2016 RPIC12D_RS04345 fbf989c7d5104740e0b84e0b4c6faaee 151 Pfam PF05154 TM2 domain 7 56 6.6E-11 T 22-04-2016 IPR007829 TM2 domain RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 2.2E-30 T 22-04-2016 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 296 318 2.2E-30 T 22-04-2016 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 2.2E-30 T 22-04-2016 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 2.2E-30 T 22-04-2016 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 283 2.2E-30 T 22-04-2016 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 SUPERFAMILY SSF55424 351 476 4.47E-25 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 Gene3D G3DSA:3.50.50.60 142 342 1.8E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 445 1.8E-60 T 22-04-2016 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 1.8E-60 T 22-04-2016 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 282 1.8E-60 T 22-04-2016 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.8E-60 T 22-04-2016 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 42 57 1.8E-60 T 22-04-2016 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 311 318 1.8E-60 T 22-04-2016 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 452 472 1.8E-60 T 22-04-2016 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 1.8E-60 T 22-04-2016 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 1.8E-60 T 22-04-2016 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 474 1.8E-21 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 PANTHER PTHR22912 1 477 8.1E-117 T 22-04-2016 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 SUPERFAMILY SSF51905 9 342 5.31E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 43 53 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 PIRSF PIRSF000350 1 475 1.5E-79 T 22-04-2016 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 333 3.9E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 Gene3D G3DSA:3.50.50.60 8 141 1.1E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 Gene3D G3DSA:3.30.390.30 352 476 2.1E-34 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIC12D_RS17150 9e66850f38713c54dc5c1f99292b8313 477 PANTHER PTHR22912:SF106 1 477 8.1E-117 T 22-04-2016 RPIC12D_RS16135 e29989d445a9740310939cafa0e8fa91 70 Pfam PF00403 Heavy-metal-associated domain 7 64 1.8E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC12D_RS16135 e29989d445a9740310939cafa0e8fa91 70 Gene3D G3DSA:3.30.70.100 6 66 2.5E-22 T 22-04-2016 RPIC12D_RS16135 e29989d445a9740310939cafa0e8fa91 70 SUPERFAMILY SSF55008 5 67 1.57E-17 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC12D_RS16135 e29989d445a9740310939cafa0e8fa91 70 PRINTS PR00944 Copper ion binding protein signature 17 30 8.1E-5 T 22-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 RPIC12D_RS16135 e29989d445a9740310939cafa0e8fa91 70 PRINTS PR00944 Copper ion binding protein signature 53 66 8.1E-5 T 22-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 RPIC12D_RS16135 e29989d445a9740310939cafa0e8fa91 70 PRINTS PR00944 Copper ion binding protein signature 5 17 8.1E-5 T 22-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 RPIC12D_RS16135 e29989d445a9740310939cafa0e8fa91 70 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 39 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RPIC12D_RS15050 3b915ba13044e9a31c599d37cc59e548 287 SUPERFAMILY SSF53697 101 272 5.66E-30 T 22-04-2016 RPIC12D_RS15050 3b915ba13044e9a31c599d37cc59e548 287 PANTHER PTHR30514:SF1 8 286 2.9E-51 T 22-04-2016 RPIC12D_RS15050 3b915ba13044e9a31c599d37cc59e548 287 Gene3D G3DSA:1.10.10.10 8 84 2.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS15050 3b915ba13044e9a31c599d37cc59e548 287 SUPERFAMILY SSF46689 7 81 9.14E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS15050 3b915ba13044e9a31c599d37cc59e548 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 81 1.4E-15 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RPIC12D_RS15050 3b915ba13044e9a31c599d37cc59e548 287 PANTHER PTHR30514 8 286 2.9E-51 T 22-04-2016 RPIC12D_RS15050 3b915ba13044e9a31c599d37cc59e548 287 Pfam PF01380 SIS domain 130 256 2.0E-13 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RPIC12D_RS15050 3b915ba13044e9a31c599d37cc59e548 287 Gene3D G3DSA:3.40.50.10490 110 272 1.4E-28 T 22-04-2016 RPIC12D_RS05520 d5e6351726b4bfb0665ecf129f18334a 193 PANTHER PTHR11071:SF192 33 191 1.6E-57 T 22-04-2016 RPIC12D_RS05520 d5e6351726b4bfb0665ecf129f18334a 193 Gene3D G3DSA:2.40.100.10 29 191 6.3E-53 T 22-04-2016 IPR029000 Cyclophilin-like domain RPIC12D_RS05520 d5e6351726b4bfb0665ecf129f18334a 193 SUPERFAMILY SSF50891 29 190 2.78E-56 T 22-04-2016 IPR029000 Cyclophilin-like domain RPIC12D_RS05520 d5e6351726b4bfb0665ecf129f18334a 193 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 71 83 4.3E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RPIC12D_RS05520 d5e6351726b4bfb0665ecf129f18334a 193 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 60 4.3E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RPIC12D_RS05520 d5e6351726b4bfb0665ecf129f18334a 193 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 146 161 4.3E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RPIC12D_RS05520 d5e6351726b4bfb0665ecf129f18334a 193 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 32 188 7.8E-47 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RPIC12D_RS05520 d5e6351726b4bfb0665ecf129f18334a 193 PANTHER PTHR11071 33 191 1.6E-57 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RPIC12D_RS05520 d5e6351726b4bfb0665ecf129f18334a 193 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 66 83 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 RPIC12D_RS04030 ca43eb2614a7f2a672b7d6dbe3628565 350 SUPERFAMILY SSF158855 65 346 1.57E-65 T 22-04-2016 RPIC12D_RS04030 ca43eb2614a7f2a672b7d6dbe3628565 350 Pfam PF03280 Proteobacterial lipase chaperone protein 134 335 7.1E-53 T 22-04-2016 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 RPIC12D_RS06525 d8183d779929f2dac8ebd46bbf51e9fe 144 Pfam PF00582 Universal stress protein family 1 144 5.7E-29 T 22-04-2016 IPR006016 UspA GO:0006950 RPIC12D_RS06525 d8183d779929f2dac8ebd46bbf51e9fe 144 PRINTS PR01438 Universal stress protein signature 2 20 3.9E-16 T 22-04-2016 IPR006015 Universal stress protein A RPIC12D_RS06525 d8183d779929f2dac8ebd46bbf51e9fe 144 PRINTS PR01438 Universal stress protein signature 122 144 3.9E-16 T 22-04-2016 IPR006015 Universal stress protein A RPIC12D_RS06525 d8183d779929f2dac8ebd46bbf51e9fe 144 PRINTS PR01438 Universal stress protein signature 104 116 3.9E-16 T 22-04-2016 IPR006015 Universal stress protein A RPIC12D_RS06525 d8183d779929f2dac8ebd46bbf51e9fe 144 PANTHER PTHR31964 1 144 5.1E-27 T 22-04-2016 RPIC12D_RS06525 d8183d779929f2dac8ebd46bbf51e9fe 144 Gene3D G3DSA:3.40.50.620 1 144 1.7E-33 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS06525 d8183d779929f2dac8ebd46bbf51e9fe 144 PANTHER PTHR31964:SF26 1 144 5.1E-27 T 22-04-2016 RPIC12D_RS06525 d8183d779929f2dac8ebd46bbf51e9fe 144 SUPERFAMILY SSF52402 1 144 4.26E-33 T 22-04-2016 RPIC12D_RS00775 926fe913132045102102614b5d451fc0 130 Pfam PF00581 Rhodanese-like domain 9 105 1.3E-13 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS00775 926fe913132045102102614b5d451fc0 130 SUPERFAMILY SSF52821 2 129 1.57E-23 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS00775 926fe913132045102102614b5d451fc0 130 Gene3D G3DSA:3.40.250.10 4 129 2.1E-32 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS00775 926fe913132045102102614b5d451fc0 130 SMART SM00450 5 113 1.5E-11 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS14725 c6e658ac978ba270bd8459eebf86e5ca 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14725 c6e658ac978ba270bd8459eebf86e5ca 138 PANTHER PTHR12220 1 136 3.2E-72 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RPIC12D_RS14725 c6e658ac978ba270bd8459eebf86e5ca 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 5.5E-59 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RPIC12D_RS14725 c6e658ac978ba270bd8459eebf86e5ca 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.8E-47 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14725 c6e658ac978ba270bd8459eebf86e5ca 138 Gene3D G3DSA:3.90.1170.10 22 135 1.6E-51 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14725 c6e658ac978ba270bd8459eebf86e5ca 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 9.1E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RPIC12D_RS14725 c6e658ac978ba270bd8459eebf86e5ca 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 9.1E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RPIC12D_RS14725 c6e658ac978ba270bd8459eebf86e5ca 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 9.1E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RPIC12D_RS14725 c6e658ac978ba270bd8459eebf86e5ca 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 9.1E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RPIC12D_RS14725 c6e658ac978ba270bd8459eebf86e5ca 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.346 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RPIC12D_RS14725 c6e658ac978ba270bd8459eebf86e5ca 138 SUPERFAMILY SSF54686 1 134 1.57E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS23270 38986e0402beb903501db2557b527f23 208 PANTHER PTHR30050:SF2 33 126 1.7E-14 T 22-04-2016 RPIC12D_RS23270 38986e0402beb903501db2557b527f23 208 Pfam PF11638 DnaA N-terminal domain 36 97 3.3E-17 T 22-04-2016 IPR024633 DnaA N-terminal domain RPIC12D_RS23270 38986e0402beb903501db2557b527f23 208 PANTHER PTHR30050 33 126 1.7E-14 T 22-04-2016 RPIC12D_RS17195 98514f5f89ca368122d7cf629ce473e5 107 Gene3D G3DSA:3.40.50.270 1 35 6.2E-7 T 22-04-2016 RPIC12D_RS17195 98514f5f89ca368122d7cf629ce473e5 107 PIRSF PIRSF029416 1 107 5.4E-50 T 22-04-2016 IPR016919 Uncharacterised conserved protein UCP029416, tyrosine-protein phosphatase, Mlr4629 RPIC12D_RS17195 98514f5f89ca368122d7cf629ce473e5 107 SUPERFAMILY SSF52788 1 101 3.01E-19 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RPIC12D_RS17195 98514f5f89ca368122d7cf629ce473e5 107 SMART SM00226 1 99 8.1E-4 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 PANTHER PTHR23420 8 145 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 PANTHER PTHR23420 181 474 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 SUPERFAMILY SSF51735 231 390 3.1E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 SMART SM00996 10 473 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 PIRSF PIRSF001109 1 474 8.2E-190 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 SUPERFAMILY SSF52283 9 147 3.51E-113 T 22-04-2016 RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 SUPERFAMILY SSF52283 183 230 3.51E-113 T 22-04-2016 RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 SUPERFAMILY SSF52283 391 474 3.51E-113 T 22-04-2016 RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 Gene3D G3DSA:3.40.50.1480 391 474 1.5E-32 T 22-04-2016 RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 231 390 3.4E-81 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 10 473 4.1E-146 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 Gene3D G3DSA:3.40.50.720 270 369 8.8E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 11 466 7.3E-184 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 466 48.731 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 Gene3D G3DSA:3.40.50.1480 182 269 2.6E-123 T 22-04-2016 RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 Gene3D G3DSA:3.40.50.1480 8 146 2.6E-123 T 22-04-2016 RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 SMART SM00997 231 390 5.4E-114 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC12D_RS16710 4af1e3b283586ccfb26c1f47be060761 474 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 253 269 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC12D_RS14950 4f5b0ed4ecef8a9c714b360e325c75e0 257 PANTHER PTHR30363:SF1 1 253 1.0E-95 T 22-04-2016 RPIC12D_RS14950 4f5b0ed4ecef8a9c714b360e325c75e0 257 Pfam PF00455 DeoR C terminal sensor domain 72 232 1.5E-49 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain RPIC12D_RS14950 4f5b0ed4ecef8a9c714b360e325c75e0 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RPIC12D_RS14950 4f5b0ed4ecef8a9c714b360e325c75e0 257 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 5.7E-18 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIC12D_RS14950 4f5b0ed4ecef8a9c714b360e325c75e0 257 Gene3D G3DSA:1.10.10.10 3 56 6.5E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS14950 4f5b0ed4ecef8a9c714b360e325c75e0 257 PANTHER PTHR30363 1 253 1.0E-95 T 22-04-2016 RPIC12D_RS14950 4f5b0ed4ecef8a9c714b360e325c75e0 257 SUPERFAMILY SSF100950 71 236 3.84E-27 T 22-04-2016 RPIC12D_RS14950 4f5b0ed4ecef8a9c714b360e325c75e0 257 SMART SM00420 4 56 6.6E-16 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIC12D_RS14950 4f5b0ed4ecef8a9c714b360e325c75e0 257 Gene3D G3DSA:3.40.50.1360 74 216 7.6E-10 T 22-04-2016 RPIC12D_RS14950 4f5b0ed4ecef8a9c714b360e325c75e0 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 5.9E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIC12D_RS14950 4f5b0ed4ecef8a9c714b360e325c75e0 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 5.9E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIC12D_RS14950 4f5b0ed4ecef8a9c714b360e325c75e0 257 SUPERFAMILY SSF46785 3 71 2.42E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS14950 4f5b0ed4ecef8a9c714b360e325c75e0 257 SMART SM01134 70 234 1.1E-68 T 22-04-2016 RPIC12D_RS03765 7243063f0e4d3b200f10a228357cb157 256 Gene3D G3DSA:3.20.20.150 1 255 9.2E-76 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC12D_RS03765 7243063f0e4d3b200f10a228357cb157 256 Pfam PF01261 Xylose isomerase-like TIM barrel 27 205 7.3E-8 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC12D_RS03765 7243063f0e4d3b200f10a228357cb157 256 SUPERFAMILY SSF51658 1 254 2.35E-57 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC12D_RS07350 9912c4464fdb23118400a10da0bd43ee 336 SUPERFAMILY SSF52540 6 206 4.09E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07350 9912c4464fdb23118400a10da0bd43ee 336 PANTHER PTHR11669:SF8 106 195 2.7E-48 T 22-04-2016 RPIC12D_RS07350 9912c4464fdb23118400a10da0bd43ee 336 PANTHER PTHR11669:SF8 15 85 2.7E-48 T 22-04-2016 RPIC12D_RS07350 9912c4464fdb23118400a10da0bd43ee 336 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 17 209 4.0E-61 T 22-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS07350 9912c4464fdb23118400a10da0bd43ee 336 Gene3D G3DSA:1.10.8.60 172 204 4.3E-4 T 22-04-2016 RPIC12D_RS07350 9912c4464fdb23118400a10da0bd43ee 336 Pfam PF13177 DNA polymerase III, delta subunit 18 182 5.4E-40 T 22-04-2016 RPIC12D_RS07350 9912c4464fdb23118400a10da0bd43ee 336 Gene3D G3DSA:3.40.50.300 5 171 1.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07350 9912c4464fdb23118400a10da0bd43ee 336 PANTHER PTHR11669 106 195 2.7E-48 T 22-04-2016 RPIC12D_RS07350 9912c4464fdb23118400a10da0bd43ee 336 PANTHER PTHR11669 15 85 2.7E-48 T 22-04-2016 RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 Gene3D G3DSA:3.40.50.300 2 192 2.8E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 5.9E-52 T 22-04-2016 RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 599 304.817 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 TIGRFAM TIGR01393 lepA: elongation factor 4 3 597 2.6E-296 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 Gene3D G3DSA:3.30.70.240 403 491 2.7E-22 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 Gene3D G3DSA:3.30.70.870 292 370 5.9E-26 T 22-04-2016 RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 SMART SM00838 400 487 7.5E-4 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 SUPERFAMILY SSF54980 293 371 5.76E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 Pfam PF06421 GTP-binding protein LepA C-terminus 489 595 3.3E-49 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 Gene3D G3DSA:2.40.30.10 193 290 1.1E-23 T 22-04-2016 RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 SUPERFAMILY SSF54980 401 495 2.01E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.5E-10 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 Pfam PF00679 Elongation factor G C-terminus 401 486 1.3E-23 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 PANTHER PTHR23115 399 597 3.3E-278 T 22-04-2016 RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 PANTHER PTHR23115 2 374 3.3E-278 T 22-04-2016 RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 PANTHER PTHR23115:SF175 399 597 3.3E-278 T 22-04-2016 RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 PANTHER PTHR23115:SF175 2 374 3.3E-278 T 22-04-2016 RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 172 2.3E-17 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 SUPERFAMILY SSF52540 2 230 1.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.35E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.35E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.35E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.35E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS04950 6ab0b0abb1dcd6397b35b134a038ff0b 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.35E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS13990 4766e70e74781765a40f8171cedd7378 155 SUPERFAMILY SSF52172 5 130 6.97E-30 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS13990 4766e70e74781765a40f8171cedd7378 155 Pfam PF00072 Response regulator receiver domain 5 127 4.4E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS13990 4766e70e74781765a40f8171cedd7378 155 PANTHER PTHR26402 3 127 9.6E-31 T 22-04-2016 RPIC12D_RS13990 4766e70e74781765a40f8171cedd7378 155 Gene3D G3DSA:3.40.50.2300 5 130 2.1E-33 T 22-04-2016 RPIC12D_RS13990 4766e70e74781765a40f8171cedd7378 155 SMART SM00448 3 127 4.6E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS07945 0f73461e3fa4b2f1e451064f8cd1d513 394 SUPERFAMILY SSF53901 272 393 2.43E-45 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS07945 0f73461e3fa4b2f1e451064f8cd1d513 394 Pfam PF00108 Thiolase, N-terminal domain 5 264 3.7E-92 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RPIC12D_RS07945 0f73461e3fa4b2f1e451064f8cd1d513 394 Pfam PF02803 Thiolase, C-terminal domain 271 393 1.8E-47 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RPIC12D_RS07945 0f73461e3fa4b2f1e451064f8cd1d513 394 Gene3D G3DSA:3.40.47.10 278 393 3.9E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS07945 0f73461e3fa4b2f1e451064f8cd1d513 394 Gene3D G3DSA:3.40.47.10 144 194 3.9E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS07945 0f73461e3fa4b2f1e451064f8cd1d513 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RPIC12D_RS07945 0f73461e3fa4b2f1e451064f8cd1d513 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 392 7.7E-142 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC12D_RS07945 0f73461e3fa4b2f1e451064f8cd1d513 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RPIC12D_RS07945 0f73461e3fa4b2f1e451064f8cd1d513 394 PIRSF PIRSF000429 1 394 6.6E-130 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC12D_RS07945 0f73461e3fa4b2f1e451064f8cd1d513 394 SUPERFAMILY SSF53901 4 271 7.68E-85 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS07945 0f73461e3fa4b2f1e451064f8cd1d513 394 PANTHER PTHR18919:SF95 1 394 2.0E-203 T 22-04-2016 RPIC12D_RS07945 0f73461e3fa4b2f1e451064f8cd1d513 394 Gene3D G3DSA:3.40.47.10 195 276 6.0E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS07945 0f73461e3fa4b2f1e451064f8cd1d513 394 Gene3D G3DSA:3.40.47.10 4 125 6.0E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS07945 0f73461e3fa4b2f1e451064f8cd1d513 394 PANTHER PTHR18919 1 394 2.0E-203 T 22-04-2016 RPIC12D_RS12975 0709c23eb60c14e1e74cd64851bbae17 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 16 130 8.8E-13 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC12D_RS12975 0709c23eb60c14e1e74cd64851bbae17 139 SUPERFAMILY SSF54593 10 135 4.16E-28 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS12975 0709c23eb60c14e1e74cd64851bbae17 139 PANTHER PTHR34109 12 133 4.0E-21 T 22-04-2016 RPIC12D_RS12975 0709c23eb60c14e1e74cd64851bbae17 139 Gene3D G3DSA:3.10.180.10 14 135 6.5E-30 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS06765 1e2eab46e9ea990757c765d95a19ade6 272 Pfam PF01148 Cytidylyltransferase family 4 271 8.3E-57 T 22-04-2016 RPIC12D_RS06765 1e2eab46e9ea990757c765d95a19ade6 272 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 232 258 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 RPIC12D_RS06765 1e2eab46e9ea990757c765d95a19ade6 272 PANTHER PTHR13773 1 271 1.7E-53 T 22-04-2016 RPIC12D_RS16455 620983a2c81c85fdb99cc04d900e61d3 483 Gene3D G3DSA:3.30.565.10 327 478 1.2E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16455 620983a2c81c85fdb99cc04d900e61d3 483 SMART SM00387 368 478 7.7E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16455 620983a2c81c85fdb99cc04d900e61d3 483 SUPERFAMILY SSF55874 313 475 5.76E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16455 620983a2c81c85fdb99cc04d900e61d3 483 PANTHER PTHR24423 238 480 2.3E-64 T 22-04-2016 RPIC12D_RS16455 620983a2c81c85fdb99cc04d900e61d3 483 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 323 1.7E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16455 620983a2c81c85fdb99cc04d900e61d3 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 2.82E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16455 620983a2c81c85fdb99cc04d900e61d3 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 2.82E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16455 620983a2c81c85fdb99cc04d900e61d3 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 2.82E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16455 620983a2c81c85fdb99cc04d900e61d3 483 Pfam PF08521 Two-component sensor kinase N-terminal 34 182 2.5E-32 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal RPIC12D_RS16455 620983a2c81c85fdb99cc04d900e61d3 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 476 4.4E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16455 620983a2c81c85fdb99cc04d900e61d3 483 Gene3D G3DSA:1.10.287.130 251 319 1.2E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16455 620983a2c81c85fdb99cc04d900e61d3 483 SUPERFAMILY SSF47384 243 323 2.16E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16455 620983a2c81c85fdb99cc04d900e61d3 483 SMART SM00388 259 324 7.6E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS13100 7399743c32e5076ab76d5f988280cddf 461 SUPERFAMILY SSF53244 312 453 5.89E-38 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC12D_RS13100 7399743c32e5076ab76d5f988280cddf 461 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 3.8E-11 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC12D_RS13100 7399743c32e5076ab76d5f988280cddf 461 Gene3D G3DSA:3.90.190.20 314 453 7.6E-37 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC12D_RS13100 7399743c32e5076ab76d5f988280cddf 461 Gene3D G3DSA:3.40.50.720 1 90 4.9E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS13100 7399743c32e5076ab76d5f988280cddf 461 Pfam PF08245 Mur ligase middle domain 108 292 2.2E-25 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13100 7399743c32e5076ab76d5f988280cddf 461 PANTHER PTHR23135 1 458 9.9E-250 T 22-04-2016 RPIC12D_RS13100 7399743c32e5076ab76d5f988280cddf 461 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 454 59.537 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 RPIC12D_RS13100 7399743c32e5076ab76d5f988280cddf 461 PANTHER PTHR23135:SF17 1 458 9.9E-250 T 22-04-2016 RPIC12D_RS13100 7399743c32e5076ab76d5f988280cddf 461 SUPERFAMILY SSF53623 98 309 9.94E-54 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13100 7399743c32e5076ab76d5f988280cddf 461 Pfam PF01225 Mur ligase family, catalytic domain 2 100 6.4E-21 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13100 7399743c32e5076ab76d5f988280cddf 461 Gene3D G3DSA:3.40.1190.10 92 313 1.5E-92 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13100 7399743c32e5076ab76d5f988280cddf 461 SUPERFAMILY SSF51984 1 90 3.01E-22 T 22-04-2016 RPIC12D_RS13100 7399743c32e5076ab76d5f988280cddf 461 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 453 6.1E-225 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 RPIC12D_RS14340 83b837bee6aa880e8945b7363579f3ab 508 Gene3D G3DSA:3.30.565.10 323 499 7.9E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS14340 83b837bee6aa880e8945b7363579f3ab 508 SUPERFAMILY SSF55874 307 493 7.73E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS14340 83b837bee6aa880e8945b7363579f3ab 508 SUPERFAMILY SSF47384 235 315 6.47E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS14340 83b837bee6aa880e8945b7363579f3ab 508 SMART SM00387 365 495 3.4E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS14340 83b837bee6aa880e8945b7363579f3ab 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 468 4.1E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS14340 83b837bee6aa880e8945b7363579f3ab 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 492 4.1E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS14340 83b837bee6aa880e8945b7363579f3ab 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 416 4.1E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS14340 83b837bee6aa880e8945b7363579f3ab 508 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 493 1.2E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS14340 83b837bee6aa880e8945b7363579f3ab 508 Pfam PF00512 His Kinase A (phospho-acceptor) domain 253 315 2.2E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS14340 83b837bee6aa880e8945b7363579f3ab 508 Gene3D G3DSA:1.10.287.130 245 313 2.9E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS14340 83b837bee6aa880e8945b7363579f3ab 508 SMART SM00388 252 317 6.6E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS14340 83b837bee6aa880e8945b7363579f3ab 508 PANTHER PTHR24423 6 14 1.2E-52 T 22-04-2016 RPIC12D_RS14340 83b837bee6aa880e8945b7363579f3ab 508 PANTHER PTHR24423 193 494 1.2E-52 T 22-04-2016 RPIC12D_RS14340 83b837bee6aa880e8945b7363579f3ab 508 Pfam PF08521 Two-component sensor kinase N-terminal 26 174 5.5E-40 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal RPIC12D_RS04890 fc563fd2695f9db4537d52d9f79dad93 59 SUPERFAMILY SSF57829 2 55 1.1E-17 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 RPIC12D_RS04890 fc563fd2695f9db4537d52d9f79dad93 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 7.3E-21 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 RPIC12D_RS04890 fc563fd2695f9db4537d52d9f79dad93 59 PANTHER PTHR35534 1 59 4.0E-25 T 22-04-2016 RPIC12D_RS04890 fc563fd2695f9db4537d52d9f79dad93 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.889 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 RPIC12D_RS04890 fc563fd2695f9db4537d52d9f79dad93 59 Pfam PF01783 Ribosomal L32p protein family 2 55 3.2E-19 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 RPIC12D_RS23940 53f47e609a7d5af208006d7113c10c80 100 SUPERFAMILY SSF52833 7 100 4.79E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS23940 53f47e609a7d5af208006d7113c10c80 100 Gene3D G3DSA:3.40.30.10 1 100 1.5E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS23940 53f47e609a7d5af208006d7113c10c80 100 PANTHER PTHR13887 3 100 1.1E-15 T 22-04-2016 RPIC12D_RS23940 53f47e609a7d5af208006d7113c10c80 100 Pfam PF01323 DSBA-like thioredoxin domain 1 100 2.7E-13 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RPIC12D_RS10345 2cae28b07961c0a717ae8dd2539fbcae 408 Gene3D G3DSA:3.30.9.10 151 299 9.3E-69 T 22-04-2016 RPIC12D_RS10345 2cae28b07961c0a717ae8dd2539fbcae 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 1.6E-28 T 22-04-2016 RPIC12D_RS10345 2cae28b07961c0a717ae8dd2539fbcae 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.6E-28 T 22-04-2016 RPIC12D_RS10345 2cae28b07961c0a717ae8dd2539fbcae 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 1.6E-28 T 22-04-2016 RPIC12D_RS10345 2cae28b07961c0a717ae8dd2539fbcae 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 1.6E-28 T 22-04-2016 RPIC12D_RS10345 2cae28b07961c0a717ae8dd2539fbcae 408 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 1 390 4.4E-180 T 22-04-2016 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 RPIC12D_RS10345 2cae28b07961c0a717ae8dd2539fbcae 408 Gene3D G3DSA:3.50.50.60 2 49 4.4E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10345 2cae28b07961c0a717ae8dd2539fbcae 408 Gene3D G3DSA:3.50.50.60 99 150 4.4E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10345 2cae28b07961c0a717ae8dd2539fbcae 408 Pfam PF01494 FAD binding domain 2 342 3.3E-84 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 RPIC12D_RS10345 2cae28b07961c0a717ae8dd2539fbcae 408 SUPERFAMILY SSF54373 176 274 2.35E-43 T 22-04-2016 RPIC12D_RS10345 2cae28b07961c0a717ae8dd2539fbcae 408 PANTHER PTHR13789:SF192 1 392 5.5E-204 T 22-04-2016 RPIC12D_RS10345 2cae28b07961c0a717ae8dd2539fbcae 408 SUPERFAMILY SSF51905 1 172 1.66E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10345 2cae28b07961c0a717ae8dd2539fbcae 408 SUPERFAMILY SSF51905 274 390 1.66E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10345 2cae28b07961c0a717ae8dd2539fbcae 408 PANTHER PTHR13789 1 392 5.5E-204 T 22-04-2016 RPIC12D_RS04880 3c9a8fc7741ef4a415b7c0ac2f4cdd53 198 Hamap MF_00528 Septum formation protein Maf [maf]. 8 196 30.236 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RPIC12D_RS04880 3c9a8fc7741ef4a415b7c0ac2f4cdd53 198 PANTHER PTHR11746 131 191 1.3E-19 T 22-04-2016 RPIC12D_RS04880 3c9a8fc7741ef4a415b7c0ac2f4cdd53 198 TIGRFAM TIGR00172 maf: septum formation protein Maf 7 190 1.9E-46 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RPIC12D_RS04880 3c9a8fc7741ef4a415b7c0ac2f4cdd53 198 Gene3D G3DSA:3.90.950.10 7 194 3.2E-56 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RPIC12D_RS04880 3c9a8fc7741ef4a415b7c0ac2f4cdd53 198 PIRSF PIRSF006305 1 196 1.2E-43 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RPIC12D_RS04880 3c9a8fc7741ef4a415b7c0ac2f4cdd53 198 SUPERFAMILY SSF52972 7 191 1.63E-57 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RPIC12D_RS04880 3c9a8fc7741ef4a415b7c0ac2f4cdd53 198 PANTHER PTHR11746:SF102 131 191 1.3E-19 T 22-04-2016 RPIC12D_RS04880 3c9a8fc7741ef4a415b7c0ac2f4cdd53 198 Pfam PF02545 Maf-like protein 9 191 2.2E-43 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RPIC12D_RS09890 d1c4a96d1bd084f6665e3bc0d8d49901 422 PANTHER PTHR13932 40 422 2.1E-176 T 22-04-2016 RPIC12D_RS09890 d1c4a96d1bd084f6665e3bc0d8d49901 422 Gene3D G3DSA:3.80.30.20 42 273 2.9E-35 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RPIC12D_RS09890 d1c4a96d1bd084f6665e3bc0d8d49901 422 PANTHER PTHR13932:SF7 40 422 2.1E-176 T 22-04-2016 RPIC12D_RS09890 d1c4a96d1bd084f6665e3bc0d8d49901 422 SMART SM00729 41 257 7.4E-52 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC12D_RS09890 d1c4a96d1bd084f6665e3bc0d8d49901 422 Pfam PF06969 HemN C-terminal domain 344 406 6.4E-11 T 22-04-2016 IPR010723 HemN, C-terminal RPIC12D_RS09890 d1c4a96d1bd084f6665e3bc0d8d49901 422 Pfam PF04055 Radical SAM superfamily 46 215 1.2E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC12D_RS09890 d1c4a96d1bd084f6665e3bc0d8d49901 422 SUPERFAMILY SSF102114 37 417 1.02E-109 T 22-04-2016 RPIC12D_RS09890 d1c4a96d1bd084f6665e3bc0d8d49901 422 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 42 391 9.2E-116 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- RPIC12D_RS09890 d1c4a96d1bd084f6665e3bc0d8d49901 422 Gene3D G3DSA:1.10.10.10 353 416 4.2E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS04565 36eff6586616df0d23dee7dbf9220156 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 116 198 1.8E-7 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RPIC12D_RS04565 36eff6586616df0d23dee7dbf9220156 213 SUPERFAMILY SSF47616 86 209 1.27E-31 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS04565 36eff6586616df0d23dee7dbf9220156 213 PANTHER PTHR11260 1 211 8.1E-64 T 22-04-2016 RPIC12D_RS04565 36eff6586616df0d23dee7dbf9220156 213 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 85 1.7E-11 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC12D_RS04565 36eff6586616df0d23dee7dbf9220156 213 PANTHER PTHR11260:SF157 1 211 8.1E-64 T 22-04-2016 RPIC12D_RS04565 36eff6586616df0d23dee7dbf9220156 213 Gene3D G3DSA:3.40.30.10 2 94 1.7E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS04565 36eff6586616df0d23dee7dbf9220156 213 Gene3D G3DSA:1.20.1050.10 95 208 8.6E-35 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS04565 36eff6586616df0d23dee7dbf9220156 213 SUPERFAMILY SSF52833 1 91 7.78E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS06420 ae67c6cac598f2372fdb5212e5f6a1e6 387 PANTHER PTHR30011 1 383 2.2E-192 T 22-04-2016 RPIC12D_RS06420 ae67c6cac598f2372fdb5212e5f6a1e6 387 Pfam PF00296 Luciferase-like monooxygenase 1 331 2.1E-86 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC12D_RS06420 ae67c6cac598f2372fdb5212e5f6a1e6 387 PANTHER PTHR30011:SF1 1 383 2.2E-192 T 22-04-2016 RPIC12D_RS06420 ae67c6cac598f2372fdb5212e5f6a1e6 387 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 355 9.3E-191 T 22-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 RPIC12D_RS06420 ae67c6cac598f2372fdb5212e5f6a1e6 387 Gene3D G3DSA:3.20.20.30 293 358 2.6E-104 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC12D_RS06420 ae67c6cac598f2372fdb5212e5f6a1e6 387 Gene3D G3DSA:3.20.20.30 1 255 2.6E-104 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC12D_RS06420 ae67c6cac598f2372fdb5212e5f6a1e6 387 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 2 385 69.654 T 22-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 RPIC12D_RS06420 ae67c6cac598f2372fdb5212e5f6a1e6 387 SUPERFAMILY SSF51679 1 357 5.89E-96 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC12D_RS10565 a768b3edaa29b8e22375516bc206b053 400 PANTHER PTHR11228 21 359 1.1E-95 T 22-04-2016 RPIC12D_RS10565 a768b3edaa29b8e22375516bc206b053 400 PANTHER PTHR11228:SF32 21 359 1.1E-95 T 22-04-2016 RPIC12D_RS10565 a768b3edaa29b8e22375516bc206b053 400 SUPERFAMILY SSF102114 25 331 3.4E-70 T 22-04-2016 RPIC12D_RS10565 a768b3edaa29b8e22375516bc206b053 400 Pfam PF13186 Iron-sulfur cluster-binding domain 256 322 8.2E-9 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain RPIC12D_RS10565 a768b3edaa29b8e22375516bc206b053 400 Gene3D G3DSA:3.20.20.70 24 340 2.3E-65 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS10565 a768b3edaa29b8e22375516bc206b053 400 Pfam PF04055 Radical SAM superfamily 33 177 5.4E-19 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC12D_RS10565 a768b3edaa29b8e22375516bc206b053 400 PIRSF PIRSF037420 15 367 2.8E-111 T 22-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 RPIC12D_RS10565 a768b3edaa29b8e22375516bc206b053 400 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 258 349 1.1E-8 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain RPIC12D_RS10565 a768b3edaa29b8e22375516bc206b053 400 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 400 184.242 T 22-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 RPIC12D_RS10565 a768b3edaa29b8e22375516bc206b053 400 SMART SM00729 27 226 0.0053 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC12D_RS10565 a768b3edaa29b8e22375516bc206b053 400 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 23 367 1.1E-156 T 22-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 RPIC12D_RS10565 a768b3edaa29b8e22375516bc206b053 400 Pfam PF13394 4Fe-4S single cluster domain 36 111 1.7E-5 T 22-04-2016 RPIC12D_RS01555 1ebae27714336b9104ee29ca1a5329a7 153 SUPERFAMILY SSF54637 13 147 6.71E-15 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS01555 1ebae27714336b9104ee29ca1a5329a7 153 Gene3D G3DSA:3.10.129.10 6 145 1.1E-6 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS11660 105523f4da61cabee9340ad83bf36062 533 PANTHER PTHR11632:SF27 2 528 3.5E-256 T 22-04-2016 RPIC12D_RS11660 105523f4da61cabee9340ad83bf36062 533 PANTHER PTHR11632 2 528 3.5E-256 T 22-04-2016 RPIC12D_RS11660 105523f4da61cabee9340ad83bf36062 533 SUPERFAMILY SSF56425 229 344 7.03E-43 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RPIC12D_RS11660 105523f4da61cabee9340ad83bf36062 533 Gene3D G3DSA:3.90.700.10 235 339 4.4E-39 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RPIC12D_RS11660 105523f4da61cabee9340ad83bf36062 533 Pfam PF02910 Fumarate reductase flavoprotein C-term 432 512 2.4E-14 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RPIC12D_RS11660 105523f4da61cabee9340ad83bf36062 533 PIRSF PIRSF000171 1 527 3.3E-31 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit RPIC12D_RS11660 105523f4da61cabee9340ad83bf36062 533 SUPERFAMILY SSF46977 416 517 1.96E-30 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RPIC12D_RS11660 105523f4da61cabee9340ad83bf36062 533 SUPERFAMILY SSF51905 2 246 3.01E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS11660 105523f4da61cabee9340ad83bf36062 533 SUPERFAMILY SSF51905 347 439 3.01E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS11660 105523f4da61cabee9340ad83bf36062 533 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 2 511 6.2E-203 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RPIC12D_RS11660 105523f4da61cabee9340ad83bf36062 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 346 368 1.37005E-7 T 22-04-2016 RPIC12D_RS11660 105523f4da61cabee9340ad83bf36062 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.37005E-7 T 22-04-2016 RPIC12D_RS11660 105523f4da61cabee9340ad83bf36062 533 Gene3D G3DSA:3.50.50.60 340 399 1.4E-101 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS11660 105523f4da61cabee9340ad83bf36062 533 Gene3D G3DSA:3.50.50.60 2 234 1.4E-101 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS11660 105523f4da61cabee9340ad83bf36062 533 Pfam PF00890 FAD binding domain 4 383 4.0E-104 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RPIC12D_RS11660 105523f4da61cabee9340ad83bf36062 533 Gene3D G3DSA:1.20.58.100 405 513 9.3E-33 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RPIC12D_RS02415 2388ae90b0bb4fb0817429529fc7d1f4 337 Gene3D G3DSA:3.90.870.10 11 212 3.4E-72 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RPIC12D_RS02415 2388ae90b0bb4fb0817429529fc7d1f4 337 Pfam PF03481 Putative GTP-binding controlling metal-binding 206 331 2.7E-21 T 22-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain RPIC12D_RS02415 2388ae90b0bb4fb0817429529fc7d1f4 337 PANTHER PTHR17490 11 335 7.0E-84 T 22-04-2016 RPIC12D_RS02415 2388ae90b0bb4fb0817429529fc7d1f4 337 PIRSF PIRSF004930 3 336 4.4E-101 T 22-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 RPIC12D_RS02415 2388ae90b0bb4fb0817429529fc7d1f4 337 Pfam PF01300 Telomere recombination 23 204 8.7E-53 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 RPIC12D_RS02415 2388ae90b0bb4fb0817429529fc7d1f4 337 SUPERFAMILY SSF55821 12 217 8.55E-58 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RPIC12D_RS02415 2388ae90b0bb4fb0817429529fc7d1f4 337 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 11 214 4.0E-52 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 RPIC12D_RS02415 2388ae90b0bb4fb0817429529fc7d1f4 337 PANTHER PTHR17490:SF3 11 335 7.0E-84 T 22-04-2016 RPIC12D_RS06455 cc6d4fbe146c6ec3449883df1880aa89 328 PANTHER PTHR30406 20 292 2.0E-163 T 22-04-2016 RPIC12D_RS06455 cc6d4fbe146c6ec3449883df1880aa89 328 Gene3D G3DSA:1.10.3720.10 31 287 1.0E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS06455 cc6d4fbe146c6ec3449883df1880aa89 328 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 27 286 2.5E-127 T 22-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 RPIC12D_RS06455 cc6d4fbe146c6ec3449883df1880aa89 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 284 1.5E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS06455 cc6d4fbe146c6ec3449883df1880aa89 328 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 30 284 1.7E-98 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 RPIC12D_RS06455 cc6d4fbe146c6ec3449883df1880aa89 328 PANTHER PTHR30406:SF1 20 292 2.0E-163 T 22-04-2016 RPIC12D_RS06455 cc6d4fbe146c6ec3449883df1880aa89 328 SUPERFAMILY SSF161098 37 276 5.89E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS14435 fa6927a865d2212eb101952f4f525025 78 SUPERFAMILY SSF82657 1 77 1.83E-29 T 22-04-2016 IPR002634 BolA protein RPIC12D_RS14435 fa6927a865d2212eb101952f4f525025 78 Gene3D G3DSA:3.30.300.90 2 77 1.5E-30 T 22-04-2016 IPR002634 BolA protein RPIC12D_RS14435 fa6927a865d2212eb101952f4f525025 78 PANTHER PTHR12735 4 77 3.0E-21 T 22-04-2016 RPIC12D_RS14435 fa6927a865d2212eb101952f4f525025 78 PIRSF PIRSF003113 1 78 6.5E-25 T 22-04-2016 IPR002634 BolA protein RPIC12D_RS14435 fa6927a865d2212eb101952f4f525025 78 Pfam PF01722 BolA-like protein 20 75 1.9E-20 T 22-04-2016 IPR002634 BolA protein RPIC12D_RS14435 fa6927a865d2212eb101952f4f525025 78 PANTHER PTHR12735:SF27 4 77 3.0E-21 T 22-04-2016 RPIC12D_RS15290 0e09b4fe4da8cfc9daf3ee952a95a9db 243 Pfam PF13633 Prokaryotic N-terminal methylation site 11 35 1.5E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS15290 0e09b4fe4da8cfc9daf3ee952a95a9db 243 SUPERFAMILY SSF54523 13 88 2.16E-9 T 22-04-2016 RPIC12D_RS15290 0e09b4fe4da8cfc9daf3ee952a95a9db 243 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 1.1E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS15290 0e09b4fe4da8cfc9daf3ee952a95a9db 243 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS07405 843efa46f4e25e7c953d4957bb5128fa 382 SUPERFAMILY SSF56796 4 380 1.83E-111 T 22-04-2016 RPIC12D_RS07405 843efa46f4e25e7c953d4957bb5128fa 382 Gene3D G3DSA:3.40.50.1970 6 183 2.4E-52 T 22-04-2016 RPIC12D_RS07405 843efa46f4e25e7c953d4957bb5128fa 382 PANTHER PTHR11496 1 382 7.4E-94 T 22-04-2016 RPIC12D_RS07405 843efa46f4e25e7c953d4957bb5128fa 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RPIC12D_RS07405 843efa46f4e25e7c953d4957bb5128fa 382 Gene3D G3DSA:1.20.1090.10 184 382 1.1E-54 T 22-04-2016 RPIC12D_RS07405 843efa46f4e25e7c953d4957bb5128fa 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 373 1.1E-105 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 RPIC12D_RS06320 0d855e4b12126140f732cc16e6d28f88 386 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 20 379 6.9E-110 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RPIC12D_RS06320 0d855e4b12126140f732cc16e6d28f88 386 PANTHER PTHR30244:SF3 4 385 9.2E-120 T 22-04-2016 RPIC12D_RS06320 0d855e4b12126140f732cc16e6d28f88 386 Gene3D G3DSA:3.40.640.10 13 251 8.9E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS06320 0d855e4b12126140f732cc16e6d28f88 386 Gene3D G3DSA:3.90.1150.10 254 384 1.1E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS06320 0d855e4b12126140f732cc16e6d28f88 386 PIRSF PIRSF000390 10 385 9.4E-102 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RPIC12D_RS06320 0d855e4b12126140f732cc16e6d28f88 386 SUPERFAMILY SSF53383 12 382 2.82E-103 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS06320 0d855e4b12126140f732cc16e6d28f88 386 PANTHER PTHR30244 4 385 9.2E-120 T 22-04-2016 RPIC12D_RS15765 1d5c8d47674f115c600571bc3fbe8209 446 PANTHER PTHR11958 1 420 1.2E-220 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS15765 1d5c8d47674f115c600571bc3fbe8209 446 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 1 430 36.639 T 22-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 RPIC12D_RS15765 1d5c8d47674f115c600571bc3fbe8209 446 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 35 50 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS15765 1d5c8d47674f115c600571bc3fbe8209 446 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 297 320 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS15765 1d5c8d47674f115c600571bc3fbe8209 446 PANTHER PTHR11958:SF47 1 420 1.2E-220 T 22-04-2016 RPIC12D_RS15765 1d5c8d47674f115c600571bc3fbe8209 446 Pfam PF00375 Sodium:dicarboxylate symporter family 8 403 2.0E-103 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS15765 1d5c8d47674f115c600571bc3fbe8209 446 SUPERFAMILY SSF118215 8 404 1.02E-107 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS15765 1d5c8d47674f115c600571bc3fbe8209 446 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 3.6E-21 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS15765 1d5c8d47674f115c600571bc3fbe8209 446 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 3.6E-21 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS15765 1d5c8d47674f115c600571bc3fbe8209 446 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 3.6E-21 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS15765 1d5c8d47674f115c600571bc3fbe8209 446 PRINTS PR00173 Glutamate-aspartate symporter signature 73 98 3.6E-21 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS15765 1d5c8d47674f115c600571bc3fbe8209 446 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 3.6E-21 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS15765 1d5c8d47674f115c600571bc3fbe8209 446 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 3.6E-21 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS15765 1d5c8d47674f115c600571bc3fbe8209 446 Gene3D G3DSA:1.10.3860.10 5 408 1.9E-107 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS14970 cf75dcf79ff63d75d7b0177b76e2e3ae 296 Gene3D G3DSA:1.10.3720.10 56 283 3.7E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS14970 cf75dcf79ff63d75d7b0177b76e2e3ae 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 281 1.9E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS14970 cf75dcf79ff63d75d7b0177b76e2e3ae 296 SUPERFAMILY SSF161098 51 275 4.19E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS14970 cf75dcf79ff63d75d7b0177b76e2e3ae 296 PANTHER PTHR30193 1 293 3.8E-74 T 22-04-2016 RPIC12D_RS14970 cf75dcf79ff63d75d7b0177b76e2e3ae 296 PANTHER PTHR30193:SF6 1 293 3.8E-74 T 22-04-2016 RPIC12D_RS12415 4e7770bc2ef96a840990569fd18486f9 354 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 35 339 4.6E-102 T 22-04-2016 IPR010068 Periplasmic binding protein TauA GO:0015734|GO:0042597 RPIC12D_RS12415 4e7770bc2ef96a840990569fd18486f9 354 SMART SM00062 34 252 6.3E-4 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS12415 4e7770bc2ef96a840990569fd18486f9 354 Gene3D G3DSA:3.40.190.10 115 238 7.3E-25 T 22-04-2016 RPIC12D_RS12415 4e7770bc2ef96a840990569fd18486f9 354 Pfam PF09084 NMT1/THI5 like 59 244 1.2E-18 T 22-04-2016 IPR015168 SsuA/THI5-like RPIC12D_RS12415 4e7770bc2ef96a840990569fd18486f9 354 SUPERFAMILY SSF53850 33 255 2.15E-39 T 22-04-2016 RPIC12D_RS12415 4e7770bc2ef96a840990569fd18486f9 354 PANTHER PTHR30024:SF17 5 259 1.4E-44 T 22-04-2016 RPIC12D_RS12415 4e7770bc2ef96a840990569fd18486f9 354 PANTHER PTHR30024 5 259 1.4E-44 T 22-04-2016 RPIC12D_RS07090 d7b49dbb9e6b95fbdd1572da6729bb66 224 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 6 148 1.6E-43 T 22-04-2016 IPR010419 Carbon monoxide dehydrogenase subunit G RPIC12D_RS07090 d7b49dbb9e6b95fbdd1572da6729bb66 224 PANTHER PTHR38588 2 207 1.5E-27 T 22-04-2016 RPIC12D_RS07090 d7b49dbb9e6b95fbdd1572da6729bb66 224 SUPERFAMILY SSF55961 1 147 3.6E-40 T 22-04-2016 RPIC12D_RS07090 d7b49dbb9e6b95fbdd1572da6729bb66 224 Gene3D G3DSA:3.30.530.20 1 150 2.5E-56 T 22-04-2016 IPR023393 START-like domain RPIC12D_RS07090 d7b49dbb9e6b95fbdd1572da6729bb66 224 PANTHER PTHR38588:SF1 2 207 1.5E-27 T 22-04-2016 RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 SUPERFAMILY SSF46689 465 517 7.17E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 SUPERFAMILY SSF46689 361 403 7.17E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 SMART SM00448 9 120 2.4E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 SUPERFAMILY SSF52172 11 190 1.57E-39 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 Gene3D G3DSA:3.40.50.300 146 318 4.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 Gene3D G3DSA:1.10.10.60 470 514 1.4E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 SMART SM00382 166 310 1.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 Pfam PF00072 Response regulator receiver domain 11 119 2.8E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 Gene3D G3DSA:3.40.50.2300 11 137 4.0E-33 T 22-04-2016 RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 PANTHER PTHR32071 6 398 5.4E-189 T 22-04-2016 RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 PANTHER PTHR32071 450 528 5.4E-189 T 22-04-2016 RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 Pfam PF00158 Sigma-54 interaction domain 148 312 6.6E-66 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 498 518 2.0E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 481 498 2.0E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 SUPERFAMILY SSF52540 148 388 1.41E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 Pfam PF02954 Bacterial regulatory protein, Fis family 475 515 5.1E-16 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 Gene3D G3DSA:1.10.8.60 319 389 1.8E-22 T 22-04-2016 RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 PANTHER PTHR32071:SF28 6 398 5.4E-189 T 22-04-2016 RPIC12D_RS13230 2758707d483d964a148a7994c9b36b3a 542 PANTHER PTHR32071:SF28 450 528 5.4E-189 T 22-04-2016 RPIC12D_RS15880 21561e7fdd4aea4bcae9eafb895405fe 377 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 297 3.8E-112 T 22-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RPIC12D_RS15880 21561e7fdd4aea4bcae9eafb895405fe 377 PANTHER PTHR36510 1 370 3.0E-125 T 22-04-2016 RPIC12D_RS15880 21561e7fdd4aea4bcae9eafb895405fe 377 SUPERFAMILY SSF55931 4 368 5.76E-116 T 22-04-2016 RPIC12D_RS15880 21561e7fdd4aea4bcae9eafb895405fe 377 PANTHER PTHR36510:SF1 1 370 3.0E-125 T 22-04-2016 RPIC12D_RS15880 21561e7fdd4aea4bcae9eafb895405fe 377 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 377 102.917 T 22-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RPIC12D_RS15880 21561e7fdd4aea4bcae9eafb895405fe 377 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 291 6.8E-60 T 22-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RPIC12D_RS02075 9cf9942d33e66ea27b20ab81b0b653e0 328 SUPERFAMILY SSF55681 3 308 4.14E-124 T 22-04-2016 RPIC12D_RS02075 9cf9942d33e66ea27b20ab81b0b653e0 328 Gene3D G3DSA:1.20.58.180 218 314 1.4E-34 T 22-04-2016 RPIC12D_RS02075 9cf9942d33e66ea27b20ab81b0b653e0 328 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 1.5E-57 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS02075 9cf9942d33e66ea27b20ab81b0b653e0 328 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 1.5E-57 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS02075 9cf9942d33e66ea27b20ab81b0b653e0 328 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 1.5E-57 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS02075 9cf9942d33e66ea27b20ab81b0b653e0 328 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 1.5E-57 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS02075 9cf9942d33e66ea27b20ab81b0b653e0 328 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 1.5E-57 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS02075 9cf9942d33e66ea27b20ab81b0b653e0 328 Gene3D G3DSA:3.30.930.10 1 216 6.7E-103 T 22-04-2016 RPIC12D_RS02075 9cf9942d33e66ea27b20ab81b0b653e0 328 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 308 1.7E-143 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS02075 9cf9942d33e66ea27b20ab81b0b653e0 328 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 309 60.15 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS02075 9cf9942d33e66ea27b20ab81b0b653e0 328 PANTHER PTHR30075 2 241 1.4E-225 T 22-04-2016 RPIC12D_RS02075 9cf9942d33e66ea27b20ab81b0b653e0 328 PANTHER PTHR30075 257 315 1.4E-225 T 22-04-2016 RPIC12D_RS02075 9cf9942d33e66ea27b20ab81b0b653e0 328 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 315 5.1E-148 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS03490 8b824119e6c5c95c917cf94651fb0c0a 684 PANTHER PTHR24095 9 662 1.4E-268 T 22-04-2016 RPIC12D_RS03490 8b824119e6c5c95c917cf94651fb0c0a 684 Pfam PF00501 AMP-binding enzyme 111 537 2.5E-44 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC12D_RS03490 8b824119e6c5c95c917cf94651fb0c0a 684 Gene3D G3DSA:3.40.50.980 100 285 8.2E-29 T 22-04-2016 RPIC12D_RS03490 8b824119e6c5c95c917cf94651fb0c0a 684 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 46 99 3.3E-10 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 RPIC12D_RS03490 8b824119e6c5c95c917cf94651fb0c0a 684 PANTHER PTHR24095:SF46 9 662 1.4E-268 T 22-04-2016 RPIC12D_RS03490 8b824119e6c5c95c917cf94651fb0c0a 684 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 9 660 1.7E-234 T 22-04-2016 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16 RPIC12D_RS03490 8b824119e6c5c95c917cf94651fb0c0a 684 Gene3D G3DSA:3.40.50.980 286 421 6.7E-13 T 22-04-2016 RPIC12D_RS03490 8b824119e6c5c95c917cf94651fb0c0a 684 SUPERFAMILY SSF56801 39 654 3.27E-119 T 22-04-2016 RPIC12D_RS03490 8b824119e6c5c95c917cf94651fb0c0a 684 Gene3D G3DSA:3.30.300.30 536 639 3.3E-11 T 22-04-2016 RPIC12D_RS03490 8b824119e6c5c95c917cf94651fb0c0a 684 ProSitePatterns PS00455 Putative AMP-binding domain signature. 280 291 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC12D_RS16925 087b90322b5f87d50209543034e7bbf7 397 SUPERFAMILY SSF53335 78 393 1.27E-67 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS16925 087b90322b5f87d50209543034e7bbf7 397 SMART SM00359 2 87 2.3E-15 T 22-04-2016 IPR002478 PUA domain GO:0003723 RPIC12D_RS16925 087b90322b5f87d50209543034e7bbf7 397 Gene3D G3DSA:3.40.50.150 187 396 2.0E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS16925 087b90322b5f87d50209543034e7bbf7 397 Gene3D G3DSA:2.30.130.10 1 70 4.6E-26 T 22-04-2016 IPR015947 PUA-like domain RPIC12D_RS16925 087b90322b5f87d50209543034e7bbf7 397 PANTHER PTHR11061 3 396 6.8E-107 T 22-04-2016 RPIC12D_RS16925 087b90322b5f87d50209543034e7bbf7 397 Gene3D G3DSA:3.30.750.80 73 181 1.4E-38 T 22-04-2016 RPIC12D_RS16925 087b90322b5f87d50209543034e7bbf7 397 SUPERFAMILY SSF88697 1 71 7.62E-17 T 22-04-2016 IPR015947 PUA-like domain RPIC12D_RS16925 087b90322b5f87d50209543034e7bbf7 397 PANTHER PTHR11061:SF12 3 396 6.8E-107 T 22-04-2016 RPIC12D_RS16925 087b90322b5f87d50209543034e7bbf7 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 172 367 6.6E-29 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 RPIC12D_RS15550 358c908e2c131597d2281c26988d5bd8 134 PANTHER PTHR23024:SF128 1 130 5.0E-43 T 22-04-2016 RPIC12D_RS15550 358c908e2c131597d2281c26988d5bd8 134 PANTHER PTHR23024 1 130 5.0E-43 T 22-04-2016 RPIC12D_RS15550 358c908e2c131597d2281c26988d5bd8 134 Pfam PF07859 alpha/beta hydrolase fold 1 106 4.3E-31 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RPIC12D_RS15550 358c908e2c131597d2281c26988d5bd8 134 Gene3D G3DSA:3.40.50.1820 1 133 6.2E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS15550 358c908e2c131597d2281c26988d5bd8 134 SUPERFAMILY SSF53474 1 133 2.03E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS12440 e4c66e2ba35a767486db5944752c61e3 547 SUPERFAMILY SSF52743 148 197 1.96E-57 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIC12D_RS12440 e4c66e2ba35a767486db5944752c61e3 547 SUPERFAMILY SSF52743 232 497 1.96E-57 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIC12D_RS12440 e4c66e2ba35a767486db5944752c61e3 547 Gene3D G3DSA:3.40.50.200 103 496 1.3E-63 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIC12D_RS12440 e4c66e2ba35a767486db5944752c61e3 547 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 429 439 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site RPIC12D_RS12440 e4c66e2ba35a767486db5944752c61e3 547 PANTHER PTHR10795 72 194 6.8E-51 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC12D_RS12440 e4c66e2ba35a767486db5944752c61e3 547 PANTHER PTHR10795 3 54 6.8E-51 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC12D_RS12440 e4c66e2ba35a767486db5944752c61e3 547 PANTHER PTHR10795 427 495 6.8E-51 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC12D_RS12440 e4c66e2ba35a767486db5944752c61e3 547 PANTHER PTHR10795 228 404 6.8E-51 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC12D_RS12440 e4c66e2ba35a767486db5944752c61e3 547 PRINTS PR00723 Subtilisin serine protease family (S8) signature 428 444 8.1E-9 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC12D_RS12440 e4c66e2ba35a767486db5944752c61e3 547 PRINTS PR00723 Subtilisin serine protease family (S8) signature 162 181 8.1E-9 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC12D_RS12440 e4c66e2ba35a767486db5944752c61e3 547 PRINTS PR00723 Subtilisin serine protease family (S8) signature 235 248 8.1E-9 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC12D_RS12440 e4c66e2ba35a767486db5944752c61e3 547 PANTHER PTHR10795:SF419 72 194 6.8E-51 T 22-04-2016 RPIC12D_RS12440 e4c66e2ba35a767486db5944752c61e3 547 PANTHER PTHR10795:SF419 3 54 6.8E-51 T 22-04-2016 RPIC12D_RS12440 e4c66e2ba35a767486db5944752c61e3 547 PANTHER PTHR10795:SF419 427 495 6.8E-51 T 22-04-2016 RPIC12D_RS12440 e4c66e2ba35a767486db5944752c61e3 547 PANTHER PTHR10795:SF419 228 404 6.8E-51 T 22-04-2016 RPIC12D_RS12440 e4c66e2ba35a767486db5944752c61e3 547 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 239 249 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site RPIC12D_RS12440 e4c66e2ba35a767486db5944752c61e3 547 Pfam PF00082 Subtilase family 163 470 4.6E-32 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIC12D_RS04805 bc9d59bbc1bce9d8505b76b6ddc8048e 389 PANTHER PTHR11098 2 389 4.8E-178 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RPIC12D_RS04805 bc9d59bbc1bce9d8505b76b6ddc8048e 389 SUPERFAMILY SSF51690 118 388 1.39E-90 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RPIC12D_RS04805 bc9d59bbc1bce9d8505b76b6ddc8048e 389 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 389 44.488 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RPIC12D_RS04805 bc9d59bbc1bce9d8505b76b6ddc8048e 389 Gene3D G3DSA:3.20.140.10 1 372 5.8E-144 T 22-04-2016 RPIC12D_RS04805 bc9d59bbc1bce9d8505b76b6ddc8048e 389 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 2 387 2.8E-143 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RPIC12D_RS04805 bc9d59bbc1bce9d8505b76b6ddc8048e 389 SUPERFAMILY SSF54675 1 137 1.58E-42 T 22-04-2016 RPIC12D_RS04805 bc9d59bbc1bce9d8505b76b6ddc8048e 389 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 163 388 1.4E-71 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RPIC12D_RS04805 bc9d59bbc1bce9d8505b76b6ddc8048e 389 PIRSF PIRSF000484 1 379 4.9E-67 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RPIC12D_RS04805 bc9d59bbc1bce9d8505b76b6ddc8048e 389 PANTHER PTHR11098:SF16 2 389 4.8E-178 T 22-04-2016 RPIC12D_RS16525 bff79336734df2056f4bce143a4bc7be 84 SUPERFAMILY SSF53850 2 81 8.14E-12 T 22-04-2016 RPIC12D_RS16525 bff79336734df2056f4bce143a4bc7be 84 Gene3D G3DSA:3.40.190.10 2 50 6.9E-7 T 22-04-2016 RPIC12D_RS16525 bff79336734df2056f4bce143a4bc7be 84 Pfam PF03466 LysR substrate binding domain 3 78 6.6E-13 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 Gene3D G3DSA:2.30.40.10 69 144 9.9E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 Gene3D G3DSA:3.20.20.140 145 434 1.0E-210 T 22-04-2016 RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 Gene3D G3DSA:3.20.20.140 493 570 1.0E-210 T 22-04-2016 RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 ProSitePatterns PS01120 Urease nickel ligands signature. 128 141 - T 22-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 SUPERFAMILY SSF51556 130 437 1.08E-196 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 SUPERFAMILY SSF51556 486 572 1.08E-196 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 335 351 2.3E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 432 445 2.3E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 406 421 2.3E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 296 313 2.3E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 5 572 1.5E-291 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 ProSitePatterns PS00145 Urease active site. 318 334 - T 22-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 120 4.0E-57 T 22-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 Hamap MF_01953 Urease subunit alpha [ureC]. 3 572 56.935 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 SUPERFAMILY SSF51338 420 482 1.41E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 SUPERFAMILY SSF51338 4 178 5.91E-64 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 PANTHER PTHR22642 25 297 5.9E-260 T 22-04-2016 RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 PANTHER PTHR22642 321 506 5.9E-260 T 22-04-2016 RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 PANTHER PTHR22642:SF7 25 297 5.9E-260 T 22-04-2016 RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 PANTHER PTHR22642:SF7 321 506 5.9E-260 T 22-04-2016 RPIC12D_RS09370 11807f087d87058649a583b78b6a88a9 572 Pfam PF01979 Amidohydrolase family 126 459 1.2E-81 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RPIC12D_RS06655 28a7459805c2055a823b6cdaae1c83e9 300 SUPERFAMILY SSF53335 15 282 9.71E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS06655 28a7459805c2055a823b6cdaae1c83e9 300 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 5 300 49.692 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 RPIC12D_RS06655 28a7459805c2055a823b6cdaae1c83e9 300 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 14 297 1.9E-62 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 RPIC12D_RS06655 28a7459805c2055a823b6cdaae1c83e9 300 PANTHER PTHR18895 14 300 2.4E-116 T 22-04-2016 RPIC12D_RS06655 28a7459805c2055a823b6cdaae1c83e9 300 Gene3D G3DSA:1.10.8.10 14 105 3.0E-9 T 22-04-2016 RPIC12D_RS06655 28a7459805c2055a823b6cdaae1c83e9 300 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 297 1.1E-122 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 RPIC12D_RS06655 28a7459805c2055a823b6cdaae1c83e9 300 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 206 212 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RPIC12D_RS06655 28a7459805c2055a823b6cdaae1c83e9 300 PANTHER PTHR18895:SF66 14 300 2.4E-116 T 22-04-2016 RPIC12D_RS06655 28a7459805c2055a823b6cdaae1c83e9 300 Pfam PF05175 Methyltransferase small domain 135 217 2.5E-12 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 RPIC12D_RS06655 28a7459805c2055a823b6cdaae1c83e9 300 Gene3D G3DSA:3.40.50.150 107 280 1.7E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS06655 28a7459805c2055a823b6cdaae1c83e9 300 PIRSF PIRSF037167 2 300 1.6E-126 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 RPIC12D_RS14850 b2f133a404c4e2ef89822b26b88354ba 124 Gene3D G3DSA:3.30.1390.10 53 123 4.6E-31 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RPIC12D_RS14850 b2f133a404c4e2ef89822b26b88354ba 124 SUPERFAMILY SSF54736 53 123 8.02E-23 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RPIC12D_RS14850 b2f133a404c4e2ef89822b26b88354ba 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 124 2.0E-19 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 RPIC12D_RS14850 b2f133a404c4e2ef89822b26b88354ba 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 3.9E-18 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14850 b2f133a404c4e2ef89822b26b88354ba 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 2.5E-28 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 RPIC12D_RS14850 b2f133a404c4e2ef89822b26b88354ba 124 SUPERFAMILY SSF48300 3 60 7.85E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14850 b2f133a404c4e2ef89822b26b88354ba 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 23.658 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14850 b2f133a404c4e2ef89822b26b88354ba 124 Gene3D G3DSA:1.20.5.710 2 52 8.3E-24 T 22-04-2016 RPIC12D_RS14850 b2f133a404c4e2ef89822b26b88354ba 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 6.7E-48 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS10355 111ab108b9cb8cc316fbdf0bb9d4795c 388 Pfam PF13458 Periplasmic binding protein 25 366 3.5E-68 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC12D_RS10355 111ab108b9cb8cc316fbdf0bb9d4795c 388 Gene3D G3DSA:3.40.50.2300 20 147 6.2E-38 T 22-04-2016 RPIC12D_RS10355 111ab108b9cb8cc316fbdf0bb9d4795c 388 Gene3D G3DSA:3.40.50.2300 302 354 6.2E-38 T 22-04-2016 RPIC12D_RS10355 111ab108b9cb8cc316fbdf0bb9d4795c 388 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 335 350 1.6E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC12D_RS10355 111ab108b9cb8cc316fbdf0bb9d4795c 388 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 1.6E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC12D_RS10355 111ab108b9cb8cc316fbdf0bb9d4795c 388 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 1.6E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC12D_RS10355 111ab108b9cb8cc316fbdf0bb9d4795c 388 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 280 293 1.6E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC12D_RS10355 111ab108b9cb8cc316fbdf0bb9d4795c 388 PANTHER PTHR30483 6 385 9.3E-105 T 22-04-2016 RPIC12D_RS10355 111ab108b9cb8cc316fbdf0bb9d4795c 388 PANTHER PTHR30483:SF13 6 385 9.3E-105 T 22-04-2016 RPIC12D_RS10355 111ab108b9cb8cc316fbdf0bb9d4795c 388 SUPERFAMILY SSF53822 25 377 1.65E-82 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS10355 111ab108b9cb8cc316fbdf0bb9d4795c 388 Gene3D G3DSA:3.40.50.2300 150 301 1.4E-19 T 22-04-2016 RPIC12D_RS17095 f31ae4a13a98153a586b1e5f2a52a275 238 SMART SM00895 98 224 5.3E-19 T 22-04-2016 IPR011711 GntR, C-terminal RPIC12D_RS17095 f31ae4a13a98153a586b1e5f2a52a275 238 SMART SM00345 15 74 1.0E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS17095 f31ae4a13a98153a586b1e5f2a52a275 238 Gene3D G3DSA:1.10.10.10 9 77 9.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS17095 f31ae4a13a98153a586b1e5f2a52a275 238 SUPERFAMILY SSF46785 7 78 3.75E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS17095 f31ae4a13a98153a586b1e5f2a52a275 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 74 1.2E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS17095 f31ae4a13a98153a586b1e5f2a52a275 238 Gene3D G3DSA:1.20.120.530 94 231 5.1E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC12D_RS17095 f31ae4a13a98153a586b1e5f2a52a275 238 PANTHER PTHR11751 10 114 9.4E-27 T 22-04-2016 RPIC12D_RS17095 f31ae4a13a98153a586b1e5f2a52a275 238 SUPERFAMILY SSF48008 94 230 2.09E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC12D_RS17095 f31ae4a13a98153a586b1e5f2a52a275 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.1E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS17095 f31ae4a13a98153a586b1e5f2a52a275 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.1E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS17095 f31ae4a13a98153a586b1e5f2a52a275 238 Pfam PF07729 FCD domain 99 222 4.4E-24 T 22-04-2016 IPR011711 GntR, C-terminal RPIC12D_RS09125 094bd7a9329758b2dfc3cd9d1901f419 273 SUPERFAMILY SSF53335 9 249 4.77E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS09125 094bd7a9329758b2dfc3cd9d1901f419 273 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 187 204 1.4E-31 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RPIC12D_RS09125 094bd7a9329758b2dfc3cd9d1901f419 273 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 229 249 1.4E-31 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RPIC12D_RS09125 094bd7a9329758b2dfc3cd9d1901f419 273 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 25 39 1.4E-31 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RPIC12D_RS09125 094bd7a9329758b2dfc3cd9d1901f419 273 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 206 224 1.4E-31 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RPIC12D_RS09125 094bd7a9329758b2dfc3cd9d1901f419 273 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 60 80 1.4E-31 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RPIC12D_RS09125 094bd7a9329758b2dfc3cd9d1901f419 273 PANTHER PTHR13370:SF8 9 271 6.1E-41 T 22-04-2016 RPIC12D_RS09125 094bd7a9329758b2dfc3cd9d1901f419 273 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 29 35 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RPIC12D_RS09125 094bd7a9329758b2dfc3cd9d1901f419 273 PANTHER PTHR13370 9 271 6.1E-41 T 22-04-2016 RPIC12D_RS09125 094bd7a9329758b2dfc3cd9d1901f419 273 Pfam PF01555 DNA methylase 26 245 5.6E-52 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 RPIC12D_RS09125 094bd7a9329758b2dfc3cd9d1901f419 273 Gene3D G3DSA:3.40.50.150 9 261 4.3E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS12195 f1cc2ad74c89031e80d4e5d77ceeec34 216 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 51 192 3.2E-15 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RPIC12D_RS12195 f1cc2ad74c89031e80d4e5d77ceeec34 216 SUPERFAMILY SSF48150 42 209 1.27E-40 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC12D_RS12195 f1cc2ad74c89031e80d4e5d77ceeec34 216 PANTHER PTHR10242 2 209 2.7E-60 T 22-04-2016 RPIC12D_RS12195 f1cc2ad74c89031e80d4e5d77ceeec34 216 Gene3D G3DSA:1.10.340.30 46 157 1.8E-29 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC12D_RS12195 f1cc2ad74c89031e80d4e5d77ceeec34 216 PANTHER PTHR10242:SF0 2 209 2.7E-60 T 22-04-2016 RPIC12D_RS12195 f1cc2ad74c89031e80d4e5d77ceeec34 216 Gene3D G3DSA:1.10.1670.10 160 209 2.6E-15 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RPIC12D_RS12195 f1cc2ad74c89031e80d4e5d77ceeec34 216 SMART SM00478 55 211 1.7E-17 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RPIC12D_RS10980 385d4038c782972890babf70ae1839fb 223 SUPERFAMILY SSF89155 20 221 4.06E-49 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RPIC12D_RS10980 385d4038c782972890babf70ae1839fb 223 Gene3D G3DSA:1.10.3480.10 16 222 3.0E-51 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RPIC12D_RS10980 385d4038c782972890babf70ae1839fb 223 PANTHER PTHR34227 1 221 6.8E-51 T 22-04-2016 RPIC12D_RS10980 385d4038c782972890babf70ae1839fb 223 PANTHER PTHR34227:SF4 1 221 6.8E-51 T 22-04-2016 RPIC12D_RS10980 385d4038c782972890babf70ae1839fb 223 Pfam PF02613 Nitrate reductase delta subunit 67 190 1.4E-30 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RPIC12D_RS14705 b61c9429be706e92ab7b5e7b13ffdfae 102 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 94 19.03 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14705 b61c9429be706e92ab7b5e7b13ffdfae 102 PANTHER PTHR12903 3 97 3.7E-33 T 22-04-2016 RPIC12D_RS14705 b61c9429be706e92ab7b5e7b13ffdfae 102 SMART SM00739 3 30 1.3E-4 T 22-04-2016 IPR005824 KOW RPIC12D_RS14705 b61c9429be706e92ab7b5e7b13ffdfae 102 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 99 2.9E-29 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14705 b61c9429be706e92ab7b5e7b13ffdfae 102 Pfam PF00467 KOW motif 6 34 4.4E-5 T 22-04-2016 IPR005824 KOW RPIC12D_RS14705 b61c9429be706e92ab7b5e7b13ffdfae 102 SUPERFAMILY SSF50104 3 97 2.47E-27 T 22-04-2016 IPR008991 Translation protein SH3-like domain RPIC12D_RS14705 b61c9429be706e92ab7b5e7b13ffdfae 102 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 37 99 9.4E-21 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14705 b61c9429be706e92ab7b5e7b13ffdfae 102 Gene3D G3DSA:2.30.30.30 3 86 1.1E-19 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 RPIC12D_RS10330 3e22c3569c0c9fe5791717d291178ed8 72 SUPERFAMILY SSF50249 1 71 8.14E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS10330 3e22c3569c0c9fe5791717d291178ed8 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 25.973 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RPIC12D_RS10330 3e22c3569c0c9fe5791717d291178ed8 72 PANTHER PTHR33370 2 72 3.0E-38 T 22-04-2016 RPIC12D_RS10330 3e22c3569c0c9fe5791717d291178ed8 72 Gene3D G3DSA:2.40.50.140 2 72 6.9E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS10330 3e22c3569c0c9fe5791717d291178ed8 72 SMART SM00316 4 72 0.0026 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC12D_RS10330 3e22c3569c0c9fe5791717d291178ed8 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 6.5E-32 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RPIC12D_RS10330 3e22c3569c0c9fe5791717d291178ed8 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.5E-24 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 RPIC12D_RS13770 c4a9e932e1b72677bde373c3ec5a3e91 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 257 3.8E-84 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC12D_RS13770 c4a9e932e1b72677bde373c3ec5a3e91 258 PANTHER PTHR11941:SF54 1 255 3.5E-123 T 22-04-2016 RPIC12D_RS13770 c4a9e932e1b72677bde373c3ec5a3e91 258 PANTHER PTHR11941 1 255 3.5E-123 T 22-04-2016 RPIC12D_RS13770 c4a9e932e1b72677bde373c3ec5a3e91 258 SUPERFAMILY SSF52096 1 257 2.49E-91 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS13770 c4a9e932e1b72677bde373c3ec5a3e91 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RPIC12D_RS13770 c4a9e932e1b72677bde373c3ec5a3e91 258 Gene3D G3DSA:3.90.226.10 1 256 2.9E-99 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS00985 f0f3ef5d40d5d3fa1fd691b4b526d4af 213 PIRSF PIRSF006324 1 210 1.3E-53 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS00985 f0f3ef5d40d5d3fa1fd691b4b526d4af 213 PANTHER PTHR30086:SF14 1 213 9.6E-67 T 22-04-2016 RPIC12D_RS00985 f0f3ef5d40d5d3fa1fd691b4b526d4af 213 Pfam PF01810 LysE type translocator 16 205 3.7E-31 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS00985 f0f3ef5d40d5d3fa1fd691b4b526d4af 213 PANTHER PTHR30086 1 213 9.6E-67 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS04325 165a3f027443dd3eae91d2551df583f2 429 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 50.547 T 22-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 RPIC12D_RS04325 165a3f027443dd3eae91d2551df583f2 429 Gene3D G3DSA:3.30.9.10 270 352 1.0E-13 T 22-04-2016 RPIC12D_RS04325 165a3f027443dd3eae91d2551df583f2 429 Gene3D G3DSA:3.30.9.10 134 193 1.0E-13 T 22-04-2016 RPIC12D_RS04325 165a3f027443dd3eae91d2551df583f2 429 SUPERFAMILY SSF54373 269 359 1.83E-17 T 22-04-2016 RPIC12D_RS04325 165a3f027443dd3eae91d2551df583f2 429 SUPERFAMILY SSF51905 107 271 3.88E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS04325 165a3f027443dd3eae91d2551df583f2 429 SUPERFAMILY SSF51905 1 54 3.88E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS04325 165a3f027443dd3eae91d2551df583f2 429 SUPERFAMILY SSF51905 359 416 3.88E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS04325 165a3f027443dd3eae91d2551df583f2 429 Pfam PF01266 FAD dependent oxidoreductase 3 397 2.1E-69 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIC12D_RS04325 165a3f027443dd3eae91d2551df583f2 429 PANTHER PTHR13847:SF148 1 63 1.8E-218 T 22-04-2016 RPIC12D_RS04325 165a3f027443dd3eae91d2551df583f2 429 PANTHER PTHR13847:SF148 107 422 1.8E-218 T 22-04-2016 RPIC12D_RS04325 165a3f027443dd3eae91d2551df583f2 429 Gene3D G3DSA:3.40.50.720 194 269 9.2E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS04325 165a3f027443dd3eae91d2551df583f2 429 Gene3D G3DSA:3.40.50.720 353 415 9.2E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS04325 165a3f027443dd3eae91d2551df583f2 429 Gene3D G3DSA:3.40.50.720 1 96 9.2E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS04325 165a3f027443dd3eae91d2551df583f2 429 PANTHER PTHR13847 1 63 1.8E-218 T 22-04-2016 RPIC12D_RS04325 165a3f027443dd3eae91d2551df583f2 429 PANTHER PTHR13847 107 422 1.8E-218 T 22-04-2016 RPIC12D_RS13165 f51698738637f2b985679a7a5852e786 269 Pfam PF15984 Bacterial collagen, middle region 32 177 4.0E-17 T 22-04-2016 IPR031929 Bacterial collagen-like protein, middle domain RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 PRINTS PR01900 YidC translocation/secretion protein signature 478 493 4.6E-25 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 PRINTS PR01900 YidC translocation/secretion protein signature 349 365 4.6E-25 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 PRINTS PR01900 YidC translocation/secretion protein signature 497 521 4.6E-25 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 Pfam PF14849 YidC periplasmic domain 85 353 5.2E-80 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 363 542 2.1E-74 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 PRINTS PR00701 60kDa inner membrane protein signature 425 448 6.9E-72 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 PRINTS PR00701 60kDa inner membrane protein signature 334 354 6.9E-72 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 PRINTS PR00701 60kDa inner membrane protein signature 226 244 6.9E-72 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 PRINTS PR00701 60kDa inner membrane protein signature 90 111 6.9E-72 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 PRINTS PR00701 60kDa inner membrane protein signature 508 531 6.9E-72 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 PRINTS PR00701 60kDa inner membrane protein signature 173 193 6.9E-72 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 PRINTS PR00701 60kDa inner membrane protein signature 2 23 6.9E-72 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 PRINTS PR00701 60kDa inner membrane protein signature 261 276 6.9E-72 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 PRINTS PR00701 60kDa inner membrane protein signature 472 494 6.9E-72 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 544 24.944 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 362 1.1E-108 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 PANTHER PTHR12428 180 542 1.4E-104 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 PANTHER PTHR12428:SF14 180 542 1.4E-104 T 22-04-2016 RPIC12D_RS17335 cdc674e47c6f96442496f21feedfdaca 554 Pfam PF02096 60Kd inner membrane protein 364 542 1.0E-63 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC12D_RS02780 d4c5f1dfa616463bd14a38781d1f03c7 433 SUPERFAMILY SSF53383 5 431 7.88E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS02780 d4c5f1dfa616463bd14a38781d1f03c7 433 Gene3D G3DSA:3.90.1150.10 327 431 4.4E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS02780 d4c5f1dfa616463bd14a38781d1f03c7 433 Gene3D G3DSA:3.90.1150.10 5 72 4.4E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS02780 d4c5f1dfa616463bd14a38781d1f03c7 433 PANTHER PTHR11986:SF5 5 433 2.8E-210 T 22-04-2016 RPIC12D_RS02780 d4c5f1dfa616463bd14a38781d1f03c7 433 PANTHER PTHR11986 5 433 2.8E-210 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS02780 d4c5f1dfa616463bd14a38781d1f03c7 433 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 7 432 2.0E-184 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC12D_RS02780 d4c5f1dfa616463bd14a38781d1f03c7 433 Gene3D G3DSA:3.40.640.10 73 323 3.1E-77 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS02780 d4c5f1dfa616463bd14a38781d1f03c7 433 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 433 102.409 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC12D_RS02780 d4c5f1dfa616463bd14a38781d1f03c7 433 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 278 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS02780 d4c5f1dfa616463bd14a38781d1f03c7 433 Pfam PF00202 Aminotransferase class-III 35 403 8.6E-75 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS00725 9d00fa35975429bd12f718c4e7e35421 185 PIRSF PIRSF018063 21 185 1.7E-57 T 22-04-2016 IPR014490 Uncharacterised conserved protein UCP018063, ferritin fold RPIC12D_RS00725 9d00fa35975429bd12f718c4e7e35421 185 Pfam PF00210 Ferritin-like domain 48 183 3.7E-29 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RPIC12D_RS00725 9d00fa35975429bd12f718c4e7e35421 185 Gene3D G3DSA:1.20.1260.10 38 183 1.3E-50 T 22-04-2016 IPR012347 Ferritin-related RPIC12D_RS00725 9d00fa35975429bd12f718c4e7e35421 185 PANTHER PTHR30295 23 185 2.2E-48 T 22-04-2016 RPIC12D_RS00725 9d00fa35975429bd12f718c4e7e35421 185 SUPERFAMILY SSF47240 40 184 2.46E-39 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC12D_RS00725 9d00fa35975429bd12f718c4e7e35421 185 PANTHER PTHR30295:SF1 23 185 2.2E-48 T 22-04-2016 RPIC12D_RS09030 0e47be4e12c633a3c74a749cba882e67 218 PRINTS PR01374 Gram-negative bacterial tonB protein signature 155 173 4.0E-5 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 RPIC12D_RS09030 0e47be4e12c633a3c74a749cba882e67 218 PRINTS PR01374 Gram-negative bacterial tonB protein signature 76 86 4.0E-5 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 RPIC12D_RS09030 0e47be4e12c633a3c74a749cba882e67 218 PRINTS PR01374 Gram-negative bacterial tonB protein signature 134 155 4.0E-5 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 RPIC12D_RS09030 0e47be4e12c633a3c74a749cba882e67 218 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 139 216 3.8E-22 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 RPIC12D_RS09030 0e47be4e12c633a3c74a749cba882e67 218 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 142 216 2.3E-17 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 RPIC12D_RS09030 0e47be4e12c633a3c74a749cba882e67 218 Gene3D G3DSA:3.30.1150.10 103 217 6.7E-17 T 22-04-2016 RPIC12D_RS09030 0e47be4e12c633a3c74a749cba882e67 218 PANTHER PTHR33446 9 218 6.6E-16 T 22-04-2016 RPIC12D_RS09030 0e47be4e12c633a3c74a749cba882e67 218 SUPERFAMILY SSF74653 103 217 2.06E-22 T 22-04-2016 RPIC12D_RS01240 579d13bcae2def4c528ed9f582d2610a 134 Pfam PF02566 OsmC-like protein 33 126 1.2E-16 T 22-04-2016 IPR003718 OsmC/Ohr family RPIC12D_RS01240 579d13bcae2def4c528ed9f582d2610a 134 PANTHER PTHR39624 24 134 3.8E-24 T 22-04-2016 RPIC12D_RS01240 579d13bcae2def4c528ed9f582d2610a 134 Gene3D G3DSA:3.30.300.20 9 129 1.7E-26 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RPIC12D_RS01240 579d13bcae2def4c528ed9f582d2610a 134 SUPERFAMILY SSF82784 11 123 2.49E-25 T 22-04-2016 IPR003718 OsmC/Ohr family RPIC12D_RS01240 579d13bcae2def4c528ed9f582d2610a 134 PANTHER PTHR39624:SF2 24 134 3.8E-24 T 22-04-2016 RPIC12D_RS10440 b28f896c80529f93c8e91a70e9d157ec 307 SMART SM00062 45 278 2.0E-51 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS10440 b28f896c80529f93c8e91a70e9d157ec 307 PANTHER PTHR30085:SF2 9 305 8.9E-109 T 22-04-2016 RPIC12D_RS10440 b28f896c80529f93c8e91a70e9d157ec 307 Gene3D G3DSA:3.40.190.10 42 129 3.9E-28 T 22-04-2016 RPIC12D_RS10440 b28f896c80529f93c8e91a70e9d157ec 307 Gene3D G3DSA:3.40.190.10 239 280 3.9E-28 T 22-04-2016 RPIC12D_RS10440 b28f896c80529f93c8e91a70e9d157ec 307 Gene3D G3DSA:3.40.190.10 130 238 6.2E-30 T 22-04-2016 RPIC12D_RS10440 b28f896c80529f93c8e91a70e9d157ec 307 SUPERFAMILY SSF53850 19 279 6.22E-61 T 22-04-2016 RPIC12D_RS10440 b28f896c80529f93c8e91a70e9d157ec 307 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 276 1.9E-47 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS10440 b28f896c80529f93c8e91a70e9d157ec 307 PANTHER PTHR30085 9 305 8.9E-109 T 22-04-2016 RPIC12D_RS08630 f96b896167e385a997b7cafd0edcf072 237 SUPERFAMILY SSF52172 3 126 4.98E-42 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS08630 f96b896167e385a997b7cafd0edcf072 237 PANTHER PTHR26402:SF576 3 234 5.0E-112 T 22-04-2016 RPIC12D_RS08630 f96b896167e385a997b7cafd0edcf072 237 Gene3D G3DSA:3.40.50.2300 3 125 2.1E-40 T 22-04-2016 RPIC12D_RS08630 f96b896167e385a997b7cafd0edcf072 237 SMART SM00862 154 231 1.9E-29 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS08630 f96b896167e385a997b7cafd0edcf072 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 231 7.4E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS08630 f96b896167e385a997b7cafd0edcf072 237 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 231 2.2E-104 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 RPIC12D_RS08630 f96b896167e385a997b7cafd0edcf072 237 Gene3D G3DSA:1.10.10.10 129 233 2.5E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08630 f96b896167e385a997b7cafd0edcf072 237 Pfam PF00072 Response regulator receiver domain 5 117 4.1E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS08630 f96b896167e385a997b7cafd0edcf072 237 SUPERFAMILY SSF46894 124 232 2.35E-28 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS08630 f96b896167e385a997b7cafd0edcf072 237 SMART SM00448 3 116 2.5E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS08630 f96b896167e385a997b7cafd0edcf072 237 PANTHER PTHR26402 3 234 5.0E-112 T 22-04-2016 RPIC12D_RS02420 5eaf38094dea8bbae23fd49dc99a6db8 347 PANTHER PTHR22835 30 337 4.7E-22 T 22-04-2016 RPIC12D_RS02420 5eaf38094dea8bbae23fd49dc99a6db8 347 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 40 51 - T 22-04-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 RPIC12D_RS02420 5eaf38094dea8bbae23fd49dc99a6db8 347 SUPERFAMILY SSF52266 312 340 5.0E-18 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain RPIC12D_RS02420 5eaf38094dea8bbae23fd49dc99a6db8 347 SUPERFAMILY SSF52266 38 270 5.0E-18 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain RPIC12D_RS02420 5eaf38094dea8bbae23fd49dc99a6db8 347 Gene3D G3DSA:3.40.50.1110 33 343 1.1E-63 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain RPIC12D_RS02420 5eaf38094dea8bbae23fd49dc99a6db8 347 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 41 334 1.2E-10 T 22-04-2016 IPR001087 GDSL lipase/esterase GO:0016788 RPIC12D_RS02420 5eaf38094dea8bbae23fd49dc99a6db8 347 PANTHER PTHR22835:SF222 30 337 4.7E-22 T 22-04-2016 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 Gene3D G3DSA:3.30.1370.10 553 620 5.8E-27 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 SMART SM00316 622 692 6.5E-23 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 PANTHER PTHR11252 3 724 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 PIRSF PIRSF005499 3 724 7.8E-297 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 Gene3D G3DSA:2.40.50.140 621 695 3.2E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 322 2.5E-16 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 SUPERFAMILY SSF55666 147 236 1.15E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 SUPERFAMILY SSF55666 452 551 1.82E-27 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 SUPERFAMILY SSF50249 622 699 2.46E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 Pfam PF03725 3' exoribonuclease family, domain 2 149 211 2.1E-12 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 Gene3D G3DSA:1.10.10.400 229 316 7.7E-21 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 693 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 SMART SM00322 554 619 7.6E-14 T 22-04-2016 IPR004087 K Homology domain GO:0003676 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 SUPERFAMILY SSF54211 3 146 1.27E-52 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 SUPERFAMILY SSF54211 297 490 1.27E-49 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 PANTHER PTHR11252:SF0 3 724 0.0 T 22-04-2016 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 Pfam PF00575 S1 RNA binding domain 621 692 3.3E-15 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 Pfam PF01138 3' exoribonuclease family, domain 1 17 146 3.2E-21 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 Pfam PF01138 3' exoribonuclease family, domain 1 326 458 2.3E-23 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 SUPERFAMILY SSF54791 556 642 2.28E-23 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 Gene3D G3DSA:3.30.230.70 317 543 5.5E-90 T 22-04-2016 IPR027408 PNPase/RNase PH domain RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 Gene3D G3DSA:3.30.230.70 3 226 1.4E-84 T 22-04-2016 IPR027408 PNPase/RNase PH domain RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 695 30.108 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 Pfam PF00013 KH domain 559 615 1.2E-10 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RPIC12D_RS09550 7ad61fb9a6f4ea22808d2523f9f05054 724 SUPERFAMILY SSF46915 241 323 3.92E-16 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIC12D_RS05170 b9ca55e60cf7227b78791e47cecf0943 458 SUPERFAMILY SSF53720 5 444 3.14E-119 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS05170 b9ca55e60cf7227b78791e47cecf0943 458 PANTHER PTHR11699 8 458 9.3E-150 T 22-04-2016 RPIC12D_RS05170 b9ca55e60cf7227b78791e47cecf0943 458 Pfam PF00171 Aldehyde dehydrogenase family 19 428 8.5E-87 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS05170 b9ca55e60cf7227b78791e47cecf0943 458 PIRSF PIRSF036492 1 457 6.0E-152 T 22-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 RPIC12D_RS05170 b9ca55e60cf7227b78791e47cecf0943 458 Gene3D G3DSA:3.40.605.10 4 226 3.5E-55 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS05170 b9ca55e60cf7227b78791e47cecf0943 458 Gene3D G3DSA:3.40.309.10 227 409 1.7E-57 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RPIC12D_RS10810 47192579be0b37da79500b7fb837aff9 215 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 37 205 1.3E-39 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RPIC12D_RS10810 47192579be0b37da79500b7fb837aff9 215 PANTHER PTHR35869 1 215 1.2E-37 T 22-04-2016 RPIC12D_RS10810 47192579be0b37da79500b7fb837aff9 215 Gene3D G3DSA:2.50.20.10 28 215 2.8E-63 T 22-04-2016 RPIC12D_RS10810 47192579be0b37da79500b7fb837aff9 215 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 10 213 1.2E-16 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 RPIC12D_RS10810 47192579be0b37da79500b7fb837aff9 215 SUPERFAMILY SSF89392 28 215 1.61E-46 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX RPIC12D_RS10810 47192579be0b37da79500b7fb837aff9 215 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 13 215 29.975 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 RPIC12D_RS01020 10cde748ba9b82232d22f178f007c968 970 Pfam PF12705 PD-(D/E)XK nuclease superfamily 692 941 8.3E-26 T 22-04-2016 RPIC12D_RS01020 10cde748ba9b82232d22f178f007c968 970 Gene3D G3DSA:3.40.50.300 561 662 5.6E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01020 10cde748ba9b82232d22f178f007c968 970 Gene3D G3DSA:3.40.50.300 292 425 5.6E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01020 10cde748ba9b82232d22f178f007c968 970 SUPERFAMILY SSF52540 15 656 8.86E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01020 10cde748ba9b82232d22f178f007c968 970 PANTHER PTHR11070 535 599 2.5E-82 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC12D_RS01020 10cde748ba9b82232d22f178f007c968 970 PANTHER PTHR11070 617 641 2.5E-82 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC12D_RS01020 10cde748ba9b82232d22f178f007c968 970 PANTHER PTHR11070 14 513 2.5E-82 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC12D_RS01020 10cde748ba9b82232d22f178f007c968 970 Gene3D G3DSA:3.40.50.300 15 285 3.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01020 10cde748ba9b82232d22f178f007c968 970 Pfam PF00580 UvrD/REP helicase N-terminal domain 17 282 2.4E-42 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RPIC12D_RS01020 10cde748ba9b82232d22f178f007c968 970 Pfam PF13361 UvrD-like helicase C-terminal domain 513 639 1.2E-16 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIC12D_RS01020 10cde748ba9b82232d22f178f007c968 970 Pfam PF13361 UvrD-like helicase C-terminal domain 289 423 1.4E-8 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIC12D_RS12095 6abbe40c8418b902898dacbd1664e48d 311 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 18 311 29.389 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD RPIC12D_RS12095 6abbe40c8418b902898dacbd1664e48d 311 SUPERFAMILY SSF56349 120 309 1.56E-57 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC12D_RS12095 6abbe40c8418b902898dacbd1664e48d 311 Pfam PF00589 Phage integrase family 125 296 4.4E-49 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS12095 6abbe40c8418b902898dacbd1664e48d 311 PANTHER PTHR30349:SF5 1 310 6.1E-107 T 22-04-2016 RPIC12D_RS12095 6abbe40c8418b902898dacbd1664e48d 311 Gene3D G3DSA:1.10.150.130 20 111 3.6E-23 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC12D_RS12095 6abbe40c8418b902898dacbd1664e48d 311 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 23 310 3.7E-110 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RPIC12D_RS12095 6abbe40c8418b902898dacbd1664e48d 311 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 18 311 61.635 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RPIC12D_RS12095 6abbe40c8418b902898dacbd1664e48d 311 PANTHER PTHR30349 1 310 6.1E-107 T 22-04-2016 RPIC12D_RS12095 6abbe40c8418b902898dacbd1664e48d 311 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 22 103 4.5E-17 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RPIC12D_RS12095 6abbe40c8418b902898dacbd1664e48d 311 SUPERFAMILY SSF47823 19 113 4.32E-30 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal RPIC12D_RS12095 6abbe40c8418b902898dacbd1664e48d 311 Gene3D G3DSA:1.10.443.10 125 301 1.7E-56 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS04895 ff908bb80618f80870bc8aea74a3dc49 353 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 336 1.2E-117 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 RPIC12D_RS04895 ff908bb80618f80870bc8aea74a3dc49 353 PANTHER PTHR30100:SF1 1 341 2.3E-137 T 22-04-2016 RPIC12D_RS04895 ff908bb80618f80870bc8aea74a3dc49 353 PANTHER PTHR30100 1 341 2.3E-137 T 22-04-2016 RPIC12D_RS04895 ff908bb80618f80870bc8aea74a3dc49 353 Pfam PF02504 Fatty acid synthesis protein 3 326 1.4E-109 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 RPIC12D_RS04895 ff908bb80618f80870bc8aea74a3dc49 353 Gene3D G3DSA:3.40.718.10 2 334 1.5E-136 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RPIC12D_RS04895 ff908bb80618f80870bc8aea74a3dc49 353 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 339 158.715 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 RPIC12D_RS04895 ff908bb80618f80870bc8aea74a3dc49 353 PIRSF PIRSF002465 1 338 1.4E-130 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 RPIC12D_RS04895 ff908bb80618f80870bc8aea74a3dc49 353 SUPERFAMILY SSF53659 3 335 2.81E-105 T 22-04-2016 RPIC12D_RS13015 2c82a3e8df622fee347ea9c276fdb5f0 509 SUPERFAMILY SSF52540 19 247 2.09E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13015 2c82a3e8df622fee347ea9c276fdb5f0 509 Pfam PF00005 ABC transporter 287 438 4.3E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS13015 2c82a3e8df622fee347ea9c276fdb5f0 509 Pfam PF00005 ABC transporter 35 184 6.8E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS13015 2c82a3e8df622fee347ea9c276fdb5f0 509 PANTHER PTHR24220 21 392 7.2E-156 T 22-04-2016 RPIC12D_RS13015 2c82a3e8df622fee347ea9c276fdb5f0 509 ProSitePatterns PS00211 ABC transporters family signature. 411 425 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS13015 2c82a3e8df622fee347ea9c276fdb5f0 509 PANTHER PTHR24220:SF516 21 392 7.2E-156 T 22-04-2016 RPIC12D_RS13015 2c82a3e8df622fee347ea9c276fdb5f0 509 SUPERFAMILY SSF52540 287 496 1.24E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13015 2c82a3e8df622fee347ea9c276fdb5f0 509 Gene3D G3DSA:3.40.50.300 19 239 2.8E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13015 2c82a3e8df622fee347ea9c276fdb5f0 509 Gene3D G3DSA:3.40.50.300 287 496 6.0E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13015 2c82a3e8df622fee347ea9c276fdb5f0 509 SMART SM00382 44 240 6.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS13015 2c82a3e8df622fee347ea9c276fdb5f0 509 SMART SM00382 293 487 1.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS08560 4a8cfb5bf4de8beaeafded1c581ebb56 411 PANTHER PTHR22893 1 335 9.9E-150 T 22-04-2016 RPIC12D_RS08560 4a8cfb5bf4de8beaeafded1c581ebb56 411 PANTHER PTHR22893:SF6 1 335 9.9E-150 T 22-04-2016 RPIC12D_RS08560 4a8cfb5bf4de8beaeafded1c581ebb56 411 Gene3D G3DSA:3.20.20.70 2 342 1.9E-110 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS08560 4a8cfb5bf4de8beaeafded1c581ebb56 411 SUPERFAMILY SSF51395 2 349 2.08E-102 T 22-04-2016 RPIC12D_RS08560 4a8cfb5bf4de8beaeafded1c581ebb56 411 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 2 336 6.7E-52 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RPIC12D_RS02630 84e882754f7685aabeef65b87651847d 414 SUPERFAMILY SSF51735 6 160 9.21E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02630 84e882754f7685aabeef65b87651847d 414 PANTHER PTHR12286:SF4 1 412 3.8E-130 T 22-04-2016 RPIC12D_RS02630 84e882754f7685aabeef65b87651847d 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 8 138 1.1E-15 T 22-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 RPIC12D_RS02630 84e882754f7685aabeef65b87651847d 414 Gene3D G3DSA:3.40.50.720 8 175 4.7E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02630 84e882754f7685aabeef65b87651847d 414 PANTHER PTHR12286 1 412 3.8E-130 T 22-04-2016 RPIC12D_RS05670 132adafed21245600bbd2a684c8b394d 733 PANTHER PTHR11669 1 365 1.3E-163 T 22-04-2016 RPIC12D_RS05670 132adafed21245600bbd2a684c8b394d 733 SUPERFAMILY SSF52540 32 229 1.16E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05670 132adafed21245600bbd2a684c8b394d 733 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 237 365 4.7E-22 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 RPIC12D_RS05670 132adafed21245600bbd2a684c8b394d 733 Gene3D G3DSA:3.40.50.300 15 171 3.3E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05670 132adafed21245600bbd2a684c8b394d 733 SUPERFAMILY SSF48019 249 367 2.21E-30 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RPIC12D_RS05670 132adafed21245600bbd2a684c8b394d 733 SMART SM00382 37 184 2.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS05670 132adafed21245600bbd2a684c8b394d 733 Gene3D G3DSA:1.10.8.60 172 247 5.0E-32 T 22-04-2016 RPIC12D_RS05670 132adafed21245600bbd2a684c8b394d 733 PANTHER PTHR11669:SF0 1 365 1.3E-163 T 22-04-2016 RPIC12D_RS05670 132adafed21245600bbd2a684c8b394d 733 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 612 724 9.2E-7 T 22-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS05670 132adafed21245600bbd2a684c8b394d 733 Pfam PF13177 DNA polymerase III, delta subunit 20 183 5.2E-38 T 22-04-2016 RPIC12D_RS05670 132adafed21245600bbd2a684c8b394d 733 Gene3D G3DSA:1.20.272.10 248 365 1.2E-40 T 22-04-2016 RPIC12D_RS05670 132adafed21245600bbd2a684c8b394d 733 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 360 2.2E-126 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 RPIC12D_RS15040 11434f1455eab86a7d1a29d19d57ea58 318 PANTHER PTHR10245 14 318 1.4E-28 T 22-04-2016 RPIC12D_RS15040 11434f1455eab86a7d1a29d19d57ea58 318 Pfam PF01381 Helix-turn-helix 48 99 2.3E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC12D_RS15040 11434f1455eab86a7d1a29d19d57ea58 318 Gene3D G3DSA:1.10.260.40 44 99 3.9E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS15040 11434f1455eab86a7d1a29d19d57ea58 318 PANTHER PTHR10245:SF17 14 318 1.4E-28 T 22-04-2016 RPIC12D_RS15040 11434f1455eab86a7d1a29d19d57ea58 318 SMART SM00530 46 101 1.2E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC12D_RS15040 11434f1455eab86a7d1a29d19d57ea58 318 SUPERFAMILY SSF47413 42 99 1.93E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS11870 4c4d86d2bf1cb562500824239753d90f 182 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 77 157 1.4E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RPIC12D_RS11870 4c4d86d2bf1cb562500824239753d90f 182 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 76 156 3.4E-29 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RPIC12D_RS11870 4c4d86d2bf1cb562500824239753d90f 182 PANTHER PTHR10815 1 159 1.6E-48 T 22-04-2016 RPIC12D_RS11870 4c4d86d2bf1cb562500824239753d90f 182 SUPERFAMILY SSF53155 1 80 4.9E-17 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 RPIC12D_RS11870 4c4d86d2bf1cb562500824239753d90f 182 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 127 133 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 RPIC12D_RS11870 4c4d86d2bf1cb562500824239753d90f 182 SUPERFAMILY SSF46767 75 158 1.7E-27 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RPIC12D_RS11870 4c4d86d2bf1cb562500824239753d90f 182 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 72 1.1E-7 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 RPIC12D_RS11870 4c4d86d2bf1cb562500824239753d90f 182 Gene3D G3DSA:1.10.10.10 75 159 1.6E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS11870 4c4d86d2bf1cb562500824239753d90f 182 PANTHER PTHR10815:SF5 1 159 1.6E-48 T 22-04-2016 RPIC12D_RS09200 c51bd0f2fae8e3577c853b9f3511eb83 269 PANTHER PTHR11751 37 103 8.9E-23 T 22-04-2016 RPIC12D_RS09200 c51bd0f2fae8e3577c853b9f3511eb83 269 PANTHER PTHR11751 149 173 8.9E-23 T 22-04-2016 RPIC12D_RS09200 c51bd0f2fae8e3577c853b9f3511eb83 269 SUPERFAMILY SSF64288 112 268 2.2E-41 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RPIC12D_RS09200 c51bd0f2fae8e3577c853b9f3511eb83 269 SMART SM00866 121 263 3.5E-36 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RPIC12D_RS09200 c51bd0f2fae8e3577c853b9f3511eb83 269 Gene3D G3DSA:3.40.1410.10 97 268 2.7E-47 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RPIC12D_RS09200 c51bd0f2fae8e3577c853b9f3511eb83 269 Pfam PF07702 UTRA domain 124 262 4.9E-37 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RPIC12D_RS09200 c51bd0f2fae8e3577c853b9f3511eb83 269 PANTHER PTHR11751:SF292 37 103 8.9E-23 T 22-04-2016 RPIC12D_RS09200 c51bd0f2fae8e3577c853b9f3511eb83 269 PANTHER PTHR11751:SF292 149 173 8.9E-23 T 22-04-2016 RPIC12D_RS09200 c51bd0f2fae8e3577c853b9f3511eb83 269 Gene3D G3DSA:1.10.10.10 37 96 2.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS09200 c51bd0f2fae8e3577c853b9f3511eb83 269 SMART SM00345 42 101 4.1E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS09200 c51bd0f2fae8e3577c853b9f3511eb83 269 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 75 91 7.3E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS09200 c51bd0f2fae8e3577c853b9f3511eb83 269 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 75 7.3E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS09200 c51bd0f2fae8e3577c853b9f3511eb83 269 SUPERFAMILY SSF46785 36 113 2.14E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS09200 c51bd0f2fae8e3577c853b9f3511eb83 269 Pfam PF00392 Bacterial regulatory proteins, gntR family 38 101 4.0E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS12550 8e88d2740d6a853514e33aff28501621 347 SUPERFAMILY SSF52540 5 336 3.7E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12550 8e88d2740d6a853514e33aff28501621 347 PANTHER PTHR30486:SF6 1 347 3.0E-185 T 22-04-2016 RPIC12D_RS12550 8e88d2740d6a853514e33aff28501621 347 PANTHER PTHR30486 1 347 3.0E-185 T 22-04-2016 RPIC12D_RS12550 8e88d2740d6a853514e33aff28501621 347 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC12D_RS12550 8e88d2740d6a853514e33aff28501621 347 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 343 8.7E-151 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 RPIC12D_RS12550 8e88d2740d6a853514e33aff28501621 347 Gene3D G3DSA:3.40.50.300 100 343 4.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12550 8e88d2740d6a853514e33aff28501621 347 Pfam PF00437 Type II/IV secretion system protein 11 267 3.0E-46 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC12D_RS12550 8e88d2740d6a853514e33aff28501621 347 SMART SM00382 122 256 4.0E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS06460 9df3fc83c2c1edc5bfa00c69b473703d 369 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS06460 9df3fc83c2c1edc5bfa00c69b473703d 369 SMART SM00382 27 214 9.1E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS06460 9df3fc83c2c1edc5bfa00c69b473703d 369 SUPERFAMILY SSF52540 3 246 1.86E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06460 9df3fc83c2c1edc5bfa00c69b473703d 369 Gene3D G3DSA:3.40.50.300 3 241 1.2E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06460 9df3fc83c2c1edc5bfa00c69b473703d 369 Pfam PF00005 ABC transporter 18 164 2.0E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS06460 9df3fc83c2c1edc5bfa00c69b473703d 369 PANTHER PTHR24220 4 251 4.6E-140 T 22-04-2016 RPIC12D_RS06460 9df3fc83c2c1edc5bfa00c69b473703d 369 SUPERFAMILY SSF50331 239 356 2.55E-9 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RPIC12D_RS06460 9df3fc83c2c1edc5bfa00c69b473703d 369 Pfam PF12857 TOBE-like domain 294 351 1.4E-18 T 22-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 RPIC12D_RS06460 9df3fc83c2c1edc5bfa00c69b473703d 369 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 241 1.4E-120 T 22-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 RPIC12D_RS06460 9df3fc83c2c1edc5bfa00c69b473703d 369 PANTHER PTHR24220:SF123 4 251 4.6E-140 T 22-04-2016 RPIC12D_RS01465 7682550fa0e37c9c4b39d05432991aca 194 Gene3D G3DSA:3.40.50.1000 17 186 1.3E-43 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS01465 7682550fa0e37c9c4b39d05432991aca 194 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 26 178 1.1E-47 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RPIC12D_RS01465 7682550fa0e37c9c4b39d05432991aca 194 PANTHER PTHR21485 20 178 1.3E-46 T 22-04-2016 RPIC12D_RS01465 7682550fa0e37c9c4b39d05432991aca 194 SUPERFAMILY SSF56784 22 189 6.7E-40 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS01465 7682550fa0e37c9c4b39d05432991aca 194 PIRSF PIRSF006118 13 188 5.6E-72 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RPIC12D_RS10365 c42c22bdf96adaf7d5c4b583bf72767c 257 PANTHER PTHR24220:SF358 13 253 3.8E-103 T 22-04-2016 RPIC12D_RS10365 c42c22bdf96adaf7d5c4b583bf72767c 257 PANTHER PTHR24220 13 253 3.8E-103 T 22-04-2016 RPIC12D_RS10365 c42c22bdf96adaf7d5c4b583bf72767c 257 Gene3D G3DSA:3.40.50.300 10 251 1.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10365 c42c22bdf96adaf7d5c4b583bf72767c 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 230 252 4.4E-10 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RPIC12D_RS10365 c42c22bdf96adaf7d5c4b583bf72767c 257 Pfam PF00005 ABC transporter 29 182 2.6E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS10365 c42c22bdf96adaf7d5c4b583bf72767c 257 SUPERFAMILY SSF52540 10 252 3.38E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10365 c42c22bdf96adaf7d5c4b583bf72767c 257 SMART SM00382 36 229 3.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS04905 57385e904199e048916064ba69bb214f 309 PIRSF PIRSF000446 1 309 3.4E-111 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 RPIC12D_RS04905 57385e904199e048916064ba69bb214f 309 Gene3D G3DSA:3.30.70.250 123 194 4.6E-30 T 22-04-2016 RPIC12D_RS04905 57385e904199e048916064ba69bb214f 309 SUPERFAMILY SSF55048 126 195 1.14E-17 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RPIC12D_RS04905 57385e904199e048916064ba69bb214f 309 Pfam PF00698 Acyl transferase domain 5 276 2.2E-36 T 22-04-2016 IPR014043 Acyl transferase RPIC12D_RS04905 57385e904199e048916064ba69bb214f 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 304 7.8E-37 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain RPIC12D_RS04905 57385e904199e048916064ba69bb214f 309 Gene3D G3DSA:3.40.366.10 2 120 6.7E-68 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RPIC12D_RS04905 57385e904199e048916064ba69bb214f 309 Gene3D G3DSA:3.40.366.10 195 287 6.7E-68 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RPIC12D_RS04905 57385e904199e048916064ba69bb214f 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 288 1.1E-107 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 RPIC12D_RS04905 57385e904199e048916064ba69bb214f 309 SUPERFAMILY SSF52151 196 289 1.1E-71 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC12D_RS04905 57385e904199e048916064ba69bb214f 309 SUPERFAMILY SSF52151 3 126 1.1E-71 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC12D_RS04905 57385e904199e048916064ba69bb214f 309 PANTHER PTHR10982 1 305 7.8E-141 T 22-04-2016 RPIC12D_RS09755 a191f8c0587d2f506d48e710289db960 320 PANTHER PTHR10587:SF72 11 308 2.4E-152 T 22-04-2016 RPIC12D_RS09755 a191f8c0587d2f506d48e710289db960 320 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 6 310 9.0E-159 T 22-04-2016 IPR017625 Putative urate catabolism protein RPIC12D_RS09755 a191f8c0587d2f506d48e710289db960 320 SUPERFAMILY SSF88713 5 310 1.5E-90 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIC12D_RS09755 a191f8c0587d2f506d48e710289db960 320 PANTHER PTHR10587 11 308 2.4E-152 T 22-04-2016 RPIC12D_RS09755 a191f8c0587d2f506d48e710289db960 320 Pfam PF01522 Polysaccharide deacetylase 76 166 2.6E-12 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIC12D_RS09755 a191f8c0587d2f506d48e710289db960 320 Gene3D G3DSA:3.20.20.370 4 311 9.1E-106 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIC12D_RS15065 511f3d3db5d290d5a50e38c503e6d439 417 PANTHER PTHR23501 22 408 3.9E-134 T 22-04-2016 RPIC12D_RS15065 511f3d3db5d290d5a50e38c503e6d439 417 Gene3D G3DSA:1.20.1250.20 32 209 1.7E-30 T 22-04-2016 RPIC12D_RS15065 511f3d3db5d290d5a50e38c503e6d439 417 Gene3D G3DSA:1.20.1250.20 230 408 8.4E-15 T 22-04-2016 RPIC12D_RS15065 511f3d3db5d290d5a50e38c503e6d439 417 PANTHER PTHR23501:SF11 22 408 3.9E-134 T 22-04-2016 RPIC12D_RS15065 511f3d3db5d290d5a50e38c503e6d439 417 SUPERFAMILY SSF103473 9 408 3.27E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS15065 511f3d3db5d290d5a50e38c503e6d439 417 Pfam PF07690 Major Facilitator Superfamily 34 279 5.6E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS02405 70b97a5df05a8bb4eea5854886b55c3d 169 PIRSF PIRSF001338 5 163 9.2E-62 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 RPIC12D_RS02405 70b97a5df05a8bb4eea5854886b55c3d 169 PANTHER PTHR23046:SF2 2 157 2.1E-76 T 22-04-2016 RPIC12D_RS02405 70b97a5df05a8bb4eea5854886b55c3d 169 SUPERFAMILY SSF52255 9 162 1.44E-62 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RPIC12D_RS02405 70b97a5df05a8bb4eea5854886b55c3d 169 Pfam PF00731 AIR carboxylase 10 157 9.6E-61 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RPIC12D_RS02405 70b97a5df05a8bb4eea5854886b55c3d 169 Gene3D G3DSA:3.40.50.7700 3 158 4.7E-70 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RPIC12D_RS02405 70b97a5df05a8bb4eea5854886b55c3d 169 SMART SM01001 8 159 1.1E-94 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RPIC12D_RS02405 70b97a5df05a8bb4eea5854886b55c3d 169 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 30.616 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RPIC12D_RS02405 70b97a5df05a8bb4eea5854886b55c3d 169 PANTHER PTHR23046 2 157 2.1E-76 T 22-04-2016 RPIC12D_RS02405 70b97a5df05a8bb4eea5854886b55c3d 169 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 157 3.4E-61 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RPIC12D_RS03235 b0147979ce86d72f49d7832160b653aa 352 PANTHER PTHR10361:SF31 2 348 1.8E-119 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 RPIC12D_RS03235 b0147979ce86d72f49d7832160b653aa 352 PANTHER PTHR10361 2 348 1.8E-119 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 RPIC12D_RS03235 b0147979ce86d72f49d7832160b653aa 352 PIRSF PIRSF005508 1 352 1.0E-116 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 RPIC12D_RS03235 b0147979ce86d72f49d7832160b653aa 352 Pfam PF01758 Sodium Bile acid symporter family 61 252 1.3E-35 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 RPIC12D_RS03235 b0147979ce86d72f49d7832160b653aa 352 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 13 340 3.7E-116 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 RPIC12D_RS00470 d42a51db8ab41613a83761ffb3bc46f8 1095 Pfam PF03308 ArgK protein 178 410 1.1E-42 T 22-04-2016 RPIC12D_RS00470 d42a51db8ab41613a83761ffb3bc46f8 1095 SUPERFAMILY SSF52540 138 416 1.87E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS00470 d42a51db8ab41613a83761ffb3bc46f8 1095 SUPERFAMILY SSF51703 512 1091 5.23E-152 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 RPIC12D_RS00470 d42a51db8ab41613a83761ffb3bc46f8 1095 PANTHER PTHR23408 480 703 1.1E-205 T 22-04-2016 RPIC12D_RS00470 d42a51db8ab41613a83761ffb3bc46f8 1095 PANTHER PTHR23408 726 1095 1.1E-205 T 22-04-2016 RPIC12D_RS00470 d42a51db8ab41613a83761ffb3bc46f8 1095 PANTHER PTHR23408:SF1 480 703 1.1E-205 T 22-04-2016 RPIC12D_RS00470 d42a51db8ab41613a83761ffb3bc46f8 1095 PANTHER PTHR23408:SF1 726 1095 1.1E-205 T 22-04-2016 RPIC12D_RS00470 d42a51db8ab41613a83761ffb3bc46f8 1095 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 726 1094 8.2E-92 T 22-04-2016 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 RPIC12D_RS00470 d42a51db8ab41613a83761ffb3bc46f8 1095 SUPERFAMILY SSF52242 22 156 5.36E-42 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RPIC12D_RS00470 d42a51db8ab41613a83761ffb3bc46f8 1095 Gene3D G3DSA:3.20.20.240 551 1091 7.2E-196 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 RPIC12D_RS00470 d42a51db8ab41613a83761ffb3bc46f8 1095 Pfam PF02310 B12 binding domain 27 129 1.7E-11 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RPIC12D_RS00470 d42a51db8ab41613a83761ffb3bc46f8 1095 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 24 137 2.5E-17 T 22-04-2016 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 RPIC12D_RS00470 d42a51db8ab41613a83761ffb3bc46f8 1095 Gene3D G3DSA:3.40.50.300 207 411 1.3E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS00470 d42a51db8ab41613a83761ffb3bc46f8 1095 Pfam PF01642 Methylmalonyl-CoA mutase 558 1089 5.0E-147 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 RPIC12D_RS00470 d42a51db8ab41613a83761ffb3bc46f8 1095 Gene3D G3DSA:3.40.50.280 22 154 4.9E-39 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RPIC12D_RS00650 833d0e0150f9aee41d16a20a093666ec 376 PANTHER PTHR10909:SF305 1 376 2.0E-173 T 22-04-2016 RPIC12D_RS00650 833d0e0150f9aee41d16a20a093666ec 376 Gene3D G3DSA:1.20.140.10 216 375 2.9E-72 T 22-04-2016 RPIC12D_RS00650 833d0e0150f9aee41d16a20a093666ec 376 SUPERFAMILY SSF56645 2 240 1.44E-85 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC12D_RS00650 833d0e0150f9aee41d16a20a093666ec 376 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 2.0E-26 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC12D_RS00650 833d0e0150f9aee41d16a20a093666ec 376 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 116 1.3E-36 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS00650 833d0e0150f9aee41d16a20a093666ec 376 Gene3D G3DSA:1.10.540.10 3 117 1.5E-42 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS00650 833d0e0150f9aee41d16a20a093666ec 376 PANTHER PTHR10909 1 376 2.0E-173 T 22-04-2016 RPIC12D_RS00650 833d0e0150f9aee41d16a20a093666ec 376 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 1.3E-50 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS00650 833d0e0150f9aee41d16a20a093666ec 376 SUPERFAMILY SSF47203 225 375 1.58E-58 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS00650 833d0e0150f9aee41d16a20a093666ec 376 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RPIC12D_RS00650 833d0e0150f9aee41d16a20a093666ec 376 Gene3D G3DSA:2.40.110.10 119 215 6.6E-42 T 22-04-2016 RPIC12D_RS09025 fc890d0feabf39746134ab38b646e24f 773 PANTHER PTHR23077 317 480 6.4E-23 T 22-04-2016 RPIC12D_RS09025 fc890d0feabf39746134ab38b646e24f 773 PANTHER PTHR23077 527 698 6.4E-23 T 22-04-2016 RPIC12D_RS09025 fc890d0feabf39746134ab38b646e24f 773 SUPERFAMILY SSF52540 550 700 2.95E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09025 fc890d0feabf39746134ab38b646e24f 773 SUPERFAMILY SSF52540 307 483 1.18E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09025 fc890d0feabf39746134ab38b646e24f 773 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 317 449 1.7E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS09025 fc890d0feabf39746134ab38b646e24f 773 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 565 686 8.4E-30 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS09025 fc890d0feabf39746134ab38b646e24f 773 SMART SM00382 313 453 7.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS09025 fc890d0feabf39746134ab38b646e24f 773 SMART SM00382 561 690 2.6E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS09025 fc890d0feabf39746134ab38b646e24f 773 Gene3D G3DSA:3.40.50.300 545 708 3.9E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09025 fc890d0feabf39746134ab38b646e24f 773 Gene3D G3DSA:3.40.50.300 300 480 4.9E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08110 22fb010049f33928e07b96192cc2a57e 335 Pfam PF00850 Histone deacetylase domain 54 298 8.9E-50 T 22-04-2016 IPR023801 Histone deacetylase domain RPIC12D_RS08110 22fb010049f33928e07b96192cc2a57e 335 Gene3D G3DSA:3.40.800.20 18 308 5.7E-63 T 22-04-2016 IPR023801 Histone deacetylase domain RPIC12D_RS08110 22fb010049f33928e07b96192cc2a57e 335 PRINTS PR01270 Histone deacetylase superfamily signature 128 151 4.3E-7 T 22-04-2016 IPR000286 Histone deacetylase superfamily RPIC12D_RS08110 22fb010049f33928e07b96192cc2a57e 335 PRINTS PR01270 Histone deacetylase superfamily signature 240 250 4.3E-7 T 22-04-2016 IPR000286 Histone deacetylase superfamily RPIC12D_RS08110 22fb010049f33928e07b96192cc2a57e 335 PANTHER PTHR10625:SF131 22 308 5.4E-108 T 22-04-2016 RPIC12D_RS08110 22fb010049f33928e07b96192cc2a57e 335 PANTHER PTHR10625 22 308 5.4E-108 T 22-04-2016 IPR000286 Histone deacetylase superfamily RPIC12D_RS08110 22fb010049f33928e07b96192cc2a57e 335 SUPERFAMILY SSF52768 17 297 1.01E-76 T 22-04-2016 RPIC12D_RS05000 77f18192040051cb6c3eeb83f0ae70e1 397 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 7 393 3.2E-154 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 RPIC12D_RS05000 77f18192040051cb6c3eeb83f0ae70e1 397 PIRSF PIRSF015557 2 397 7.6E-165 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 RPIC12D_RS05000 77f18192040051cb6c3eeb83f0ae70e1 397 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 7 393 2.0E-152 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 RPIC12D_RS10865 0e2fdd96480edb3ccc78f4fd53bf3816 478 Gene3D G3DSA:3.40.309.10 261 449 1.6E-57 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RPIC12D_RS10865 0e2fdd96480edb3ccc78f4fd53bf3816 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS10865 0e2fdd96480edb3ccc78f4fd53bf3816 478 SUPERFAMILY SSF53720 2 476 1.83E-153 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS10865 0e2fdd96480edb3ccc78f4fd53bf3816 478 PANTHER PTHR11699 1 477 1.1E-196 T 22-04-2016 RPIC12D_RS10865 0e2fdd96480edb3ccc78f4fd53bf3816 478 Pfam PF00171 Aldehyde dehydrogenase family 18 473 2.0E-157 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS10865 0e2fdd96480edb3ccc78f4fd53bf3816 478 Gene3D G3DSA:3.40.605.10 2 260 6.5E-91 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS15135 f4880d6fd0d0a928ee8a0e7c636c574e 272 PANTHER PTHR30204:SF13 13 99 1.9E-26 T 22-04-2016 RPIC12D_RS15135 f4880d6fd0d0a928ee8a0e7c636c574e 272 PANTHER PTHR30204 13 99 1.9E-26 T 22-04-2016 RPIC12D_RS15135 f4880d6fd0d0a928ee8a0e7c636c574e 272 Gene3D G3DSA:1.10.1660.10 21 93 4.3E-17 T 22-04-2016 RPIC12D_RS15135 f4880d6fd0d0a928ee8a0e7c636c574e 272 SMART SM00422 21 89 8.9E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS15135 f4880d6fd0d0a928ee8a0e7c636c574e 272 Pfam PF13411 MerR HTH family regulatory protein 21 88 1.2E-18 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS15135 f4880d6fd0d0a928ee8a0e7c636c574e 272 SUPERFAMILY SSF46955 21 93 4.03E-15 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC12D_RS16770 8c14645493bff9116655e719211ae578 451 Gene3D G3DSA:3.90.1150.10 316 441 2.3E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS16770 8c14645493bff9116655e719211ae578 451 Pfam PF00202 Aminotransferase class-III 21 438 1.5E-103 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS16770 8c14645493bff9116655e719211ae578 451 PANTHER PTHR11986 10 447 2.3E-210 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS16770 8c14645493bff9116655e719211ae578 451 SUPERFAMILY SSF53383 16 440 1.15E-125 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS16770 8c14645493bff9116655e719211ae578 451 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 241 278 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS16770 8c14645493bff9116655e719211ae578 451 PANTHER PTHR11986:SF78 10 447 2.3E-210 T 22-04-2016 RPIC12D_RS16770 8c14645493bff9116655e719211ae578 451 Gene3D G3DSA:3.40.640.10 52 315 8.4E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS13345 b7619aef71d0c82da17184e178ba8c0b 573 PANTHER PTHR11070 6 549 4.3E-26 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC12D_RS13345 b7619aef71d0c82da17184e178ba8c0b 573 SUPERFAMILY SSF52540 6 554 1.36E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13345 b7619aef71d0c82da17184e178ba8c0b 573 Gene3D G3DSA:3.40.50.300 6 109 3.6E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13345 b7619aef71d0c82da17184e178ba8c0b 573 Gene3D G3DSA:3.40.50.300 182 277 3.6E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13345 b7619aef71d0c82da17184e178ba8c0b 573 Pfam PF00580 UvrD/REP helicase N-terminal domain 189 257 1.6E-13 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RPIC12D_RS13345 b7619aef71d0c82da17184e178ba8c0b 573 Gene3D G3DSA:3.40.50.300 494 555 2.0E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13345 b7619aef71d0c82da17184e178ba8c0b 573 Gene3D G3DSA:3.40.50.300 278 374 2.0E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03240 c0c2d865e9c2124e55fbbec416cb0f85 588 SUPERFAMILY SSF52540 318 577 3.43E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03240 c0c2d865e9c2124e55fbbec416cb0f85 588 Gene3D G3DSA:3.40.50.300 323 579 1.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03240 c0c2d865e9c2124e55fbbec416cb0f85 588 Gene3D G3DSA:3.40.50.300 6 266 2.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03240 c0c2d865e9c2124e55fbbec416cb0f85 588 PIRSF PIRSF001327 1 586 6.2E-262 T 22-04-2016 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 RPIC12D_RS03240 c0c2d865e9c2124e55fbbec416cb0f85 588 SMART SM00382 326 555 0.01 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS03240 c0c2d865e9c2124e55fbbec416cb0f85 588 SMART SM00382 7 226 0.013 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS03240 c0c2d865e9c2124e55fbbec416cb0f85 588 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 7 571 1.3E-270 T 22-04-2016 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 RPIC12D_RS03240 c0c2d865e9c2124e55fbbec416cb0f85 588 PANTHER PTHR10803:SF0 9 397 3.2E-72 T 22-04-2016 RPIC12D_RS03240 c0c2d865e9c2124e55fbbec416cb0f85 588 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 12 291 2.3E-80 T 22-04-2016 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 RPIC12D_RS03240 c0c2d865e9c2124e55fbbec416cb0f85 588 PANTHER PTHR10803 9 397 3.2E-72 T 22-04-2016 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 RPIC12D_RS03240 c0c2d865e9c2124e55fbbec416cb0f85 588 Pfam PF02374 Anion-transporting ATPase 329 463 1.7E-30 T 22-04-2016 IPR025723 Anion-transporting ATPase-like domain RPIC12D_RS03240 c0c2d865e9c2124e55fbbec416cb0f85 588 Pfam PF02374 Anion-transporting ATPase 9 291 7.0E-78 T 22-04-2016 IPR025723 Anion-transporting ATPase-like domain RPIC12D_RS03240 c0c2d865e9c2124e55fbbec416cb0f85 588 Pfam PF02374 Anion-transporting ATPase 466 583 1.0E-6 T 22-04-2016 IPR025723 Anion-transporting ATPase-like domain RPIC12D_RS03240 c0c2d865e9c2124e55fbbec416cb0f85 588 SUPERFAMILY SSF52540 5 270 1.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04685 bef632921c97dcf9b8e1bbc0fa0c3868 231 Pfam PF00440 Bacterial regulatory proteins, tetR family 36 80 5.0E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS04685 bef632921c97dcf9b8e1bbc0fa0c3868 231 PANTHER PTHR30328 11 226 7.5E-54 T 22-04-2016 RPIC12D_RS04685 bef632921c97dcf9b8e1bbc0fa0c3868 231 SUPERFAMILY SSF46689 23 106 1.44E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS04685 bef632921c97dcf9b8e1bbc0fa0c3868 231 PANTHER PTHR30328:SF16 11 226 7.5E-54 T 22-04-2016 RPIC12D_RS04685 bef632921c97dcf9b8e1bbc0fa0c3868 231 Gene3D G3DSA:1.10.357.10 83 224 6.7E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC12D_RS04685 bef632921c97dcf9b8e1bbc0fa0c3868 231 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 49 1.6E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS04685 bef632921c97dcf9b8e1bbc0fa0c3868 231 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 57 80 1.6E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS04685 bef632921c97dcf9b8e1bbc0fa0c3868 231 Gene3D G3DSA:1.10.10.60 22 82 2.1E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS04685 bef632921c97dcf9b8e1bbc0fa0c3868 231 SUPERFAMILY SSF48498 103 227 1.89E-35 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC12D_RS04740 dcdccf59aafb149303d09630d4e87355 405 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 6 405 9.6E-230 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 RPIC12D_RS04740 dcdccf59aafb149303d09630d4e87355 405 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 4 396 55.134 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 RPIC12D_RS04740 dcdccf59aafb149303d09630d4e87355 405 PIRSF PIRSF005572 5 385 6.6E-134 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RPIC12D_RS04740 dcdccf59aafb149303d09630d4e87355 405 PANTHER PTHR11601:SF34 7 405 2.0E-233 T 22-04-2016 RPIC12D_RS04740 dcdccf59aafb149303d09630d4e87355 405 SUPERFAMILY SSF53383 8 392 1.2E-111 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS04740 dcdccf59aafb149303d09630d4e87355 405 Pfam PF00266 Aminotransferase class-V 8 370 2.5E-88 T 22-04-2016 IPR000192 Aminotransferase class V domain RPIC12D_RS04740 dcdccf59aafb149303d09630d4e87355 405 PANTHER PTHR11601 7 405 2.0E-233 T 22-04-2016 RPIC12D_RS04740 dcdccf59aafb149303d09630d4e87355 405 Gene3D G3DSA:3.90.1150.10 256 375 4.2E-51 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS04740 dcdccf59aafb149303d09630d4e87355 405 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 198 217 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RPIC12D_RS04740 dcdccf59aafb149303d09630d4e87355 405 Gene3D G3DSA:3.40.640.10 20 255 1.4E-98 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS16840 1ada3cf39ffc16a553a4a4cb65410c11 401 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 96 312 5.9E-75 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 RPIC12D_RS16840 1ada3cf39ffc16a553a4a4cb65410c11 401 SUPERFAMILY SSF102405 106 312 1.17E-42 T 22-04-2016 RPIC12D_RS16840 1ada3cf39ffc16a553a4a4cb65410c11 401 PANTHER PTHR32039 90 399 7.3E-101 T 22-04-2016 RPIC12D_RS16840 1ada3cf39ffc16a553a4a4cb65410c11 401 Gene3D G3DSA:1.10.150.20 32 79 1.7E-5 T 22-04-2016 RPIC12D_RS16840 1ada3cf39ffc16a553a4a4cb65410c11 401 Pfam PF02481 DNA recombination-mediator protein A 99 303 9.5E-75 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 RPIC12D_RS16840 1ada3cf39ffc16a553a4a4cb65410c11 401 Gene3D G3DSA:3.40.50.450 139 282 3.1E-11 T 22-04-2016 RPIC12D_RS16840 1ada3cf39ffc16a553a4a4cb65410c11 401 PANTHER PTHR32039:SF8 90 399 7.3E-101 T 22-04-2016 RPIC12D_RS16840 1ada3cf39ffc16a553a4a4cb65410c11 401 SUPERFAMILY SSF47781 27 78 5.68E-6 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RPIC12D_RS04080 0eb832cc2438d9592e42a6fd9fd9906d 252 Pfam PF01145 SPFH domain / Band 7 family 26 194 6.0E-34 T 22-04-2016 IPR001107 Band 7 domain RPIC12D_RS04080 0eb832cc2438d9592e42a6fd9fd9906d 252 SUPERFAMILY SSF117892 52 185 1.18E-42 T 22-04-2016 IPR001107 Band 7 domain RPIC12D_RS04080 0eb832cc2438d9592e42a6fd9fd9906d 252 PANTHER PTHR10264:SF60 11 243 3.0E-110 T 22-04-2016 RPIC12D_RS04080 0eb832cc2438d9592e42a6fd9fd9906d 252 PANTHER PTHR10264 11 243 3.0E-110 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC12D_RS04080 0eb832cc2438d9592e42a6fd9fd9906d 252 SMART SM00244 21 178 1.1E-61 T 22-04-2016 IPR001107 Band 7 domain RPIC12D_RS04080 0eb832cc2438d9592e42a6fd9fd9906d 252 PRINTS PR00721 Stomatin signature 173 194 2.0E-62 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC12D_RS04080 0eb832cc2438d9592e42a6fd9fd9906d 252 PRINTS PR00721 Stomatin signature 130 153 2.0E-62 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC12D_RS04080 0eb832cc2438d9592e42a6fd9fd9906d 252 PRINTS PR00721 Stomatin signature 110 127 2.0E-62 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC12D_RS04080 0eb832cc2438d9592e42a6fd9fd9906d 252 PRINTS PR00721 Stomatin signature 198 221 2.0E-62 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC12D_RS04080 0eb832cc2438d9592e42a6fd9fd9906d 252 PRINTS PR00721 Stomatin signature 75 96 2.0E-62 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC12D_RS04080 0eb832cc2438d9592e42a6fd9fd9906d 252 PRINTS PR00721 Stomatin signature 154 172 2.0E-62 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC12D_RS04080 0eb832cc2438d9592e42a6fd9fd9906d 252 PRINTS PR00721 Stomatin signature 28 50 2.0E-62 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC12D_RS10515 9e93334c11616dc53080e246fc684d83 273 PANTHER PTHR38776 13 272 1.3E-15 T 22-04-2016 RPIC12D_RS10515 9e93334c11616dc53080e246fc684d83 273 Pfam PF06629 MltA-interacting protein MipA 51 272 1.3E-41 T 22-04-2016 IPR010583 MltA-interacting MipA RPIC12D_RS06260 3be88a1ee4060cb41de9ca6b527f5005 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal RPIC12D_RS06260 3be88a1ee4060cb41de9ca6b527f5005 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 1.0E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal RPIC12D_RS06260 3be88a1ee4060cb41de9ca6b527f5005 150 Gene3D G3DSA:3.10.430.100 60 147 4.0E-27 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal RPIC12D_RS06260 3be88a1ee4060cb41de9ca6b527f5005 150 PANTHER PTHR21368 1 145 8.5E-45 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06260 3be88a1ee4060cb41de9ca6b527f5005 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 4.2E-21 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal RPIC12D_RS06260 3be88a1ee4060cb41de9ca6b527f5005 150 SUPERFAMILY SSF55653 60 147 3.27E-26 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal RPIC12D_RS06260 3be88a1ee4060cb41de9ca6b527f5005 150 SUPERFAMILY SSF55658 1 56 5.06E-18 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RPIC12D_RS06260 3be88a1ee4060cb41de9ca6b527f5005 150 Gene3D G3DSA:3.40.5.10 1 52 8.4E-24 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal RPIC12D_RS06260 3be88a1ee4060cb41de9ca6b527f5005 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.648 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06260 3be88a1ee4060cb41de9ca6b527f5005 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 6.9E-45 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14585 3db21c1fd32090c6d1d4c799dff5d11c 142 PIRSF PIRSF029720 6 142 5.3E-50 T 22-04-2016 IPR014558 Uncharacterised conserved lipoprotein RPIC12D_RS14585 3db21c1fd32090c6d1d4c799dff5d11c 142 PANTHER PTHR39335 50 142 3.9E-35 T 22-04-2016 RPIC12D_RS14585 3db21c1fd32090c6d1d4c799dff5d11c 142 Pfam PF03640 Secreted repeat of unknown function 44 85 4.5E-13 T 22-04-2016 IPR005297 Lipoprotein repeat RPIC12D_RS14585 3db21c1fd32090c6d1d4c799dff5d11c 142 Pfam PF03640 Secreted repeat of unknown function 98 141 9.8E-20 T 22-04-2016 IPR005297 Lipoprotein repeat RPIC12D_RS07015 aaf60ccc77e004fbf88255be976257c2 540 Gene3D G3DSA:3.40.50.300 319 537 4.8E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07015 aaf60ccc77e004fbf88255be976257c2 540 Gene3D G3DSA:3.40.50.300 2 88 2.8E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07015 aaf60ccc77e004fbf88255be976257c2 540 Gene3D G3DSA:3.40.50.300 121 270 2.8E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07015 aaf60ccc77e004fbf88255be976257c2 540 Pfam PF00005 ABC transporter 18 184 1.8E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS07015 aaf60ccc77e004fbf88255be976257c2 540 Pfam PF00005 ABC transporter 335 475 1.4E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS07015 aaf60ccc77e004fbf88255be976257c2 540 Pfam PF12848 ABC transporter 224 309 2.0E-21 T 22-04-2016 IPR032781 ABC-transporter extension domain RPIC12D_RS07015 aaf60ccc77e004fbf88255be976257c2 540 SUPERFAMILY SSF52540 6 237 1.57E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07015 aaf60ccc77e004fbf88255be976257c2 540 PANTHER PTHR19211:SF38 2 536 0.0 T 22-04-2016 RPIC12D_RS07015 aaf60ccc77e004fbf88255be976257c2 540 SMART SM00382 343 519 3.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS07015 aaf60ccc77e004fbf88255be976257c2 540 SMART SM00382 26 238 1.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS07015 aaf60ccc77e004fbf88255be976257c2 540 SUPERFAMILY SSF52540 296 536 7.19E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07015 aaf60ccc77e004fbf88255be976257c2 540 PANTHER PTHR19211 2 536 0.0 T 22-04-2016 RPIC12D_RS01960 0d1c9bcd267028a22a9e765dc49729bd 181 Gene3D G3DSA:3.30.420.10 1 155 2.3E-63 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS01960 0d1c9bcd267028a22a9e765dc49729bd 181 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 153 1.1E-52 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIC12D_RS01960 0d1c9bcd267028a22a9e765dc49729bd 181 PANTHER PTHR30194 1 169 2.8E-64 T 22-04-2016 RPIC12D_RS01960 0d1c9bcd267028a22a9e765dc49729bd 181 SUPERFAMILY SSF53098 1 155 1.19E-53 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS01960 0d1c9bcd267028a22a9e765dc49729bd 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.3E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIC12D_RS01960 0d1c9bcd267028a22a9e765dc49729bd 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.3E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIC12D_RS01960 0d1c9bcd267028a22a9e765dc49729bd 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.3E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIC12D_RS01960 0d1c9bcd267028a22a9e765dc49729bd 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.3E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIC12D_RS01960 0d1c9bcd267028a22a9e765dc49729bd 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.3E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIC12D_RS01960 0d1c9bcd267028a22a9e765dc49729bd 181 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 RPIC12D_RS01960 0d1c9bcd267028a22a9e765dc49729bd 181 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 150 6.7E-51 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIC12D_RS01960 0d1c9bcd267028a22a9e765dc49729bd 181 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 153 46.699 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIC12D_RS02500 e3a5d22267780af220112c9a56cbebed 421 SUPERFAMILY SSF54373 182 289 5.1E-31 T 22-04-2016 RPIC12D_RS02500 e3a5d22267780af220112c9a56cbebed 421 SUPERFAMILY SSF51905 285 369 7.54E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS02500 e3a5d22267780af220112c9a56cbebed 421 SUPERFAMILY SSF51905 1 177 7.54E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS02500 e3a5d22267780af220112c9a56cbebed 421 PANTHER PTHR13789:SF241 2 407 8.9E-106 T 22-04-2016 RPIC12D_RS02500 e3a5d22267780af220112c9a56cbebed 421 PANTHER PTHR13789 2 407 8.9E-106 T 22-04-2016 RPIC12D_RS02500 e3a5d22267780af220112c9a56cbebed 421 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 313 329 5.5E-18 T 22-04-2016 RPIC12D_RS02500 e3a5d22267780af220112c9a56cbebed 421 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 5.5E-18 T 22-04-2016 RPIC12D_RS02500 e3a5d22267780af220112c9a56cbebed 421 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 313 5.5E-18 T 22-04-2016 RPIC12D_RS02500 e3a5d22267780af220112c9a56cbebed 421 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 5.5E-18 T 22-04-2016 RPIC12D_RS02500 e3a5d22267780af220112c9a56cbebed 421 Gene3D G3DSA:3.50.50.60 1 182 2.0E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS02500 e3a5d22267780af220112c9a56cbebed 421 Gene3D G3DSA:3.50.50.60 285 358 2.0E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS02500 e3a5d22267780af220112c9a56cbebed 421 Pfam PF01494 FAD binding domain 2 358 1.0E-21 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 RPIC12D_RS03905 8609fbe73c6fa98404c220142e307650 195 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 16 179 36.627 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RPIC12D_RS03905 8609fbe73c6fa98404c220142e307650 195 SUPERFAMILY SSF55068 13 186 1.44E-69 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RPIC12D_RS03905 8609fbe73c6fa98404c220142e307650 195 PANTHER PTHR10173 1 174 1.0E-80 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 RPIC12D_RS03905 8609fbe73c6fa98404c220142e307650 195 Gene3D G3DSA:3.30.1060.10 5 174 5.5E-70 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RPIC12D_RS03905 8609fbe73c6fa98404c220142e307650 195 PANTHER PTHR10173:SF34 1 174 1.0E-80 T 22-04-2016 RPIC12D_RS03905 8609fbe73c6fa98404c220142e307650 195 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 17 174 2.6E-54 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RPIC12D_RS03905 8609fbe73c6fa98404c220142e307650 195 Pfam PF01625 Peptide methionine sulfoxide reductase 19 174 3.6E-60 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RPIC12D_RS07200 a6b2f3923ac226e4825d21f9873020a9 235 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 4 220 27.974 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 RPIC12D_RS07200 a6b2f3923ac226e4825d21f9873020a9 235 SUPERFAMILY SSF52540 8 212 1.83E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07200 a6b2f3923ac226e4825d21f9873020a9 235 PIRSF PIRSF006755 5 230 2.6E-60 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 RPIC12D_RS07200 a6b2f3923ac226e4825d21f9873020a9 235 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 8 178 5.2E-45 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 RPIC12D_RS07200 a6b2f3923ac226e4825d21f9873020a9 235 Pfam PF13500 AAA domain 8 213 4.4E-39 T 22-04-2016 RPIC12D_RS07200 a6b2f3923ac226e4825d21f9873020a9 235 PANTHER PTHR21343 9 235 1.5E-72 T 22-04-2016 RPIC12D_RS07200 a6b2f3923ac226e4825d21f9873020a9 235 PANTHER PTHR21343:SF13 9 235 1.5E-72 T 22-04-2016 RPIC12D_RS07200 a6b2f3923ac226e4825d21f9873020a9 235 Gene3D G3DSA:3.40.50.300 8 217 2.9E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15825 8fc89b65d14ee350bb3d59d8c6c9809c 706 Gene3D G3DSA:1.10.10.160 122 195 3.3E-15 T 22-04-2016 IPR013986 DExx box DNA helicase domain RPIC12D_RS15825 8fc89b65d14ee350bb3d59d8c6c9809c 706 Gene3D G3DSA:3.40.50.300 298 400 1.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15825 8fc89b65d14ee350bb3d59d8c6c9809c 706 Gene3D G3DSA:3.40.50.300 582 669 1.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15825 8fc89b65d14ee350bb3d59d8c6c9809c 706 Gene3D G3DSA:1.10.486.10 401 540 1.5E-35 T 22-04-2016 RPIC12D_RS15825 8fc89b65d14ee350bb3d59d8c6c9809c 706 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 7 699 37.874 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 RPIC12D_RS15825 8fc89b65d14ee350bb3d59d8c6c9809c 706 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 283 8.1E-68 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RPIC12D_RS15825 8fc89b65d14ee350bb3d59d8c6c9809c 706 PANTHER PTHR11070 1 529 1.9E-273 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC12D_RS15825 8fc89b65d14ee350bb3d59d8c6c9809c 706 PANTHER PTHR11070 559 668 1.9E-273 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC12D_RS15825 8fc89b65d14ee350bb3d59d8c6c9809c 706 Gene3D G3DSA:3.40.50.300 196 297 8.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15825 8fc89b65d14ee350bb3d59d8c6c9809c 706 Gene3D G3DSA:3.40.50.300 5 118 8.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15825 8fc89b65d14ee350bb3d59d8c6c9809c 706 Pfam PF13361 UvrD-like helicase C-terminal domain 289 648 2.1E-61 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIC12D_RS15825 8fc89b65d14ee350bb3d59d8c6c9809c 706 SUPERFAMILY SSF52540 5 668 7.46E-150 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15825 8fc89b65d14ee350bb3d59d8c6c9809c 706 PANTHER PTHR11070:SF19 1 529 1.9E-273 T 22-04-2016 RPIC12D_RS15825 8fc89b65d14ee350bb3d59d8c6c9809c 706 PANTHER PTHR11070:SF19 559 668 1.9E-273 T 22-04-2016 RPIC12D_RS07790 a78be2c265d7a655de99000844f246f4 62 Pfam PF05532 CsbD-like 4 56 4.4E-15 T 22-04-2016 IPR008462 CsbD-like RPIC12D_RS07790 a78be2c265d7a655de99000844f246f4 62 Gene3D G3DSA:1.10.1470.10 1 60 4.0E-16 T 22-04-2016 IPR008462 CsbD-like RPIC12D_RS07790 a78be2c265d7a655de99000844f246f4 62 SUPERFAMILY SSF69047 1 59 1.31E-13 T 22-04-2016 IPR008462 CsbD-like RPIC12D_RS17045 0033a742e9741d246b6c135ccd59f75e 426 PANTHER PTHR11986:SF70 14 425 2.8E-190 T 22-04-2016 RPIC12D_RS17045 0033a742e9741d246b6c135ccd59f75e 426 Gene3D G3DSA:3.40.640.10 64 308 1.7E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS17045 0033a742e9741d246b6c135ccd59f75e 426 Gene3D G3DSA:3.90.1150.10 309 425 3.5E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS17045 0033a742e9741d246b6c135ccd59f75e 426 SUPERFAMILY SSF53383 28 425 2.99E-134 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS17045 0033a742e9741d246b6c135ccd59f75e 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 241 278 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS17045 0033a742e9741d246b6c135ccd59f75e 426 PANTHER PTHR11986 14 425 2.8E-190 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS17045 0033a742e9741d246b6c135ccd59f75e 426 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 15 424 2.8E-192 T 22-04-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 RPIC12D_RS17045 0033a742e9741d246b6c135ccd59f75e 426 Pfam PF00202 Aminotransferase class-III 28 424 3.1E-127 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS01475 4454eac3add5233cddcf63eed6236d17 659 Gene3D G3DSA:3.30.70.1450 586 656 4.9E-15 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RPIC12D_RS01475 4454eac3add5233cddcf63eed6236d17 659 SUPERFAMILY SSF116726 578 656 2.75E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RPIC12D_RS01475 4454eac3add5233cddcf63eed6236d17 659 Gene3D G3DSA:3.40.50.720 409 541 7.4E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS01475 4454eac3add5233cddcf63eed6236d17 659 SUPERFAMILY SSF51735 410 550 4.35E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS01475 4454eac3add5233cddcf63eed6236d17 659 Pfam PF02254 TrkA-N domain 413 526 4.1E-23 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RPIC12D_RS01475 4454eac3add5233cddcf63eed6236d17 659 Pfam PF00999 Sodium/hydrogen exchanger family 8 376 5.2E-66 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RPIC12D_RS01475 4454eac3add5233cddcf63eed6236d17 659 Pfam PF02080 TrkA-C domain 588 656 5.6E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RPIC12D_RS01475 4454eac3add5233cddcf63eed6236d17 659 PANTHER PTHR16254 8 570 3.6E-164 T 22-04-2016 RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 Gene3D G3DSA:3.30.365.10 194 300 3.7E-22 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 Gene3D G3DSA:3.30.365.10 381 473 3.9E-61 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 Gene3D G3DSA:3.30.365.10 670 814 3.9E-61 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 SUPERFAMILY SSF54665 17 171 7.46E-44 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 PANTHER PTHR11908:SF76 22 480 3.8E-295 T 22-04-2016 RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 PANTHER PTHR11908:SF76 496 606 3.8E-295 T 22-04-2016 RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 PANTHER PTHR11908:SF76 633 821 3.8E-295 T 22-04-2016 RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 Gene3D G3DSA:3.30.365.10 474 656 1.6E-31 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 Gene3D G3DSA:3.90.1170.50 13 138 1.7E-42 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 851 989 7.2E-26 T 22-04-2016 IPR010419 Carbon monoxide dehydrogenase subunit G RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 PANTHER PTHR11908 22 480 3.8E-295 T 22-04-2016 RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 PANTHER PTHR11908 496 606 3.8E-295 T 22-04-2016 RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 PANTHER PTHR11908 633 821 3.8E-295 T 22-04-2016 RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 167 755 7.4E-142 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 SUPERFAMILY SSF55961 850 990 4.28E-38 T 22-04-2016 RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 SUPERFAMILY SSF56003 142 814 1.19E-163 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 SMART SM01008 39 150 1.8E-47 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 39 150 8.1E-29 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 Gene3D G3DSA:3.30.365.10 139 193 8.7E-37 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 Gene3D G3DSA:3.30.365.10 304 379 8.7E-37 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS08785 8a6bd9ad84bb8da6863f6d17689134ec 1011 Gene3D G3DSA:3.30.530.20 850 996 3.4E-46 T 22-04-2016 IPR023393 START-like domain RPIC12D_RS01115 7a8ff156d807e8f6a94a495d35106722 159 Pfam PF00210 Ferritin-like domain 8 143 4.3E-39 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RPIC12D_RS01115 7a8ff156d807e8f6a94a495d35106722 159 PIRSF PIRSF002560 1 157 1.4E-72 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC12D_RS01115 7a8ff156d807e8f6a94a495d35106722 159 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 2.4E-75 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC12D_RS01115 7a8ff156d807e8f6a94a495d35106722 159 Gene3D G3DSA:1.20.1260.10 1 156 7.5E-66 T 22-04-2016 IPR012347 Ferritin-related RPIC12D_RS01115 7a8ff156d807e8f6a94a495d35106722 159 PRINTS PR00601 Bacterioferritin signature 86 106 2.2E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC12D_RS01115 7a8ff156d807e8f6a94a495d35106722 159 PRINTS PR00601 Bacterioferritin signature 44 64 2.2E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC12D_RS01115 7a8ff156d807e8f6a94a495d35106722 159 PRINTS PR00601 Bacterioferritin signature 107 127 2.2E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC12D_RS01115 7a8ff156d807e8f6a94a495d35106722 159 PRINTS PR00601 Bacterioferritin signature 65 85 2.2E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC12D_RS01115 7a8ff156d807e8f6a94a495d35106722 159 PRINTS PR00601 Bacterioferritin signature 23 43 2.2E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC12D_RS01115 7a8ff156d807e8f6a94a495d35106722 159 PRINTS PR00601 Bacterioferritin signature 3 22 2.2E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC12D_RS01115 7a8ff156d807e8f6a94a495d35106722 159 PRINTS PR00601 Bacterioferritin signature 128 149 2.2E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC12D_RS01115 7a8ff156d807e8f6a94a495d35106722 159 PANTHER PTHR30295 1 155 1.5E-49 T 22-04-2016 RPIC12D_RS01115 7a8ff156d807e8f6a94a495d35106722 159 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC12D_RS01115 7a8ff156d807e8f6a94a495d35106722 159 PANTHER PTHR30295:SF9 1 155 1.5E-49 T 22-04-2016 RPIC12D_RS01115 7a8ff156d807e8f6a94a495d35106722 159 SUPERFAMILY SSF47240 1 157 6.04E-55 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC12D_RS04270 2b3ea79d7ba9d5af8352c6be7fcf2e46 331 Gene3D G3DSA:3.40.50.720 1 170 3.6E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS04270 2b3ea79d7ba9d5af8352c6be7fcf2e46 331 SUPERFAMILY SSF51735 1 329 1.65E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS04270 2b3ea79d7ba9d5af8352c6be7fcf2e46 331 PANTHER PTHR10366 2 265 1.5E-99 T 22-04-2016 RPIC12D_RS04270 2b3ea79d7ba9d5af8352c6be7fcf2e46 331 PANTHER PTHR10366 281 329 1.5E-99 T 22-04-2016 RPIC12D_RS04270 2b3ea79d7ba9d5af8352c6be7fcf2e46 331 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 3 328 3.1E-137 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 RPIC12D_RS04270 2b3ea79d7ba9d5af8352c6be7fcf2e46 331 Gene3D G3DSA:3.90.25.10 171 310 8.2E-33 T 22-04-2016 RPIC12D_RS04270 2b3ea79d7ba9d5af8352c6be7fcf2e46 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 241 2.1E-45 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RPIC12D_RS04270 2b3ea79d7ba9d5af8352c6be7fcf2e46 331 PANTHER PTHR10366:SF469 2 265 1.5E-99 T 22-04-2016 RPIC12D_RS04270 2b3ea79d7ba9d5af8352c6be7fcf2e46 331 PANTHER PTHR10366:SF469 281 329 1.5E-99 T 22-04-2016 RPIC12D_RS04270 2b3ea79d7ba9d5af8352c6be7fcf2e46 331 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 2 329 59.69 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 RPIC12D_RS16885 de56662300948ce09f1dfc51865d7969 347 Gene3D G3DSA:3.30.420.40 10 164 9.5E-46 T 22-04-2016 RPIC12D_RS16885 de56662300948ce09f1dfc51865d7969 347 SUPERFAMILY SSF53067 9 153 4.99E-38 T 22-04-2016 RPIC12D_RS16885 de56662300948ce09f1dfc51865d7969 347 PANTHER PTHR19375:SF117 9 332 4.6E-179 T 22-04-2016 RPIC12D_RS16885 de56662300948ce09f1dfc51865d7969 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 4.8E-157 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RPIC12D_RS16885 de56662300948ce09f1dfc51865d7969 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 1.9E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RPIC12D_RS16885 de56662300948ce09f1dfc51865d7969 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 1.9E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RPIC12D_RS16885 de56662300948ce09f1dfc51865d7969 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 1.9E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RPIC12D_RS16885 de56662300948ce09f1dfc51865d7969 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 1.9E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RPIC12D_RS16885 de56662300948ce09f1dfc51865d7969 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 1.9E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RPIC12D_RS16885 de56662300948ce09f1dfc51865d7969 347 PANTHER PTHR19375 9 332 4.6E-179 T 22-04-2016 RPIC12D_RS16885 de56662300948ce09f1dfc51865d7969 347 Pfam PF06723 MreB/Mbl protein 10 340 2.1E-150 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RPIC12D_RS16885 de56662300948ce09f1dfc51865d7969 347 SUPERFAMILY SSF53067 154 339 2.41E-48 T 22-04-2016 RPIC12D_RS16885 de56662300948ce09f1dfc51865d7969 347 Gene3D G3DSA:3.30.420.40 268 322 8.5E-33 T 22-04-2016 RPIC12D_RS16885 de56662300948ce09f1dfc51865d7969 347 Gene3D G3DSA:3.30.420.40 165 191 8.5E-33 T 22-04-2016 RPIC12D_RS16885 de56662300948ce09f1dfc51865d7969 347 Gene3D G3DSA:3.90.640.10 192 264 3.1E-30 T 22-04-2016 RPIC12D_RS02170 e79027d3b32b359bcd21af74f8dc5225 565 SUPERFAMILY SSF52540 81 366 1.18E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS02170 e79027d3b32b359bcd21af74f8dc5225 565 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 530 51.898 T 22-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 RPIC12D_RS02170 e79027d3b32b359bcd21af74f8dc5225 565 Gene3D G3DSA:3.40.50.300 219 378 2.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS02170 e79027d3b32b359bcd21af74f8dc5225 565 SMART SM00487 20 228 2.5E-63 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC12D_RS02170 e79027d3b32b359bcd21af74f8dc5225 565 PANTHER PTHR24031 1 466 3.7E-194 T 22-04-2016 RPIC12D_RS02170 e79027d3b32b359bcd21af74f8dc5225 565 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 159 167 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RPIC12D_RS02170 e79027d3b32b359bcd21af74f8dc5225 565 PANTHER PTHR24031:SF261 1 466 3.7E-194 T 22-04-2016 RPIC12D_RS02170 e79027d3b32b359bcd21af74f8dc5225 565 Pfam PF00271 Helicase conserved C-terminal domain 239 345 3.7E-27 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS02170 e79027d3b32b359bcd21af74f8dc5225 565 SMART SM00490 264 345 3.5E-33 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS02170 e79027d3b32b359bcd21af74f8dc5225 565 Pfam PF00270 DEAD/DEAH box helicase 25 201 1.7E-48 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIC12D_RS02170 e79027d3b32b359bcd21af74f8dc5225 565 Gene3D G3DSA:3.40.50.300 1 218 8.3E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS00250 2c3a77bf01ec3e1ae3222914a03232f9 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.4E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS00250 2c3a77bf01ec3e1ae3222914a03232f9 307 SUPERFAMILY SSF46785 3 85 1.98E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00250 2c3a77bf01ec3e1ae3222914a03232f9 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS00250 2c3a77bf01ec3e1ae3222914a03232f9 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS00250 2c3a77bf01ec3e1ae3222914a03232f9 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS00250 2c3a77bf01ec3e1ae3222914a03232f9 307 Pfam PF03466 LysR substrate binding domain 94 294 6.2E-26 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS00250 2c3a77bf01ec3e1ae3222914a03232f9 307 Gene3D G3DSA:1.10.10.10 6 87 3.7E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00250 2c3a77bf01ec3e1ae3222914a03232f9 307 PANTHER PTHR30126 6 307 6.0E-47 T 22-04-2016 RPIC12D_RS00250 2c3a77bf01ec3e1ae3222914a03232f9 307 Gene3D G3DSA:3.40.190.10 175 265 1.5E-14 T 22-04-2016 RPIC12D_RS00250 2c3a77bf01ec3e1ae3222914a03232f9 307 Gene3D G3DSA:3.40.190.10 107 174 3.0E-7 T 22-04-2016 RPIC12D_RS00250 2c3a77bf01ec3e1ae3222914a03232f9 307 SUPERFAMILY SSF53850 94 301 1.33E-25 T 22-04-2016 RPIC12D_RS09285 b1a19816c2e82e9e02028a634adf78f8 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RPIC12D_RS09285 b1a19816c2e82e9e02028a634adf78f8 259 SUPERFAMILY SSF52096 6 259 1.23E-76 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS09285 b1a19816c2e82e9e02028a634adf78f8 259 Gene3D G3DSA:3.90.226.10 7 259 2.1E-76 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS09285 b1a19816c2e82e9e02028a634adf78f8 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 258 1.7E-54 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC12D_RS09285 b1a19816c2e82e9e02028a634adf78f8 259 PANTHER PTHR11941 11 258 1.9E-80 T 22-04-2016 RPIC12D_RS08200 c8a96a323443c98f6831916911a5f3ce 256 SUPERFAMILY SSF56529 39 249 2.09E-73 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC12D_RS08200 c8a96a323443c98f6831916911a5f3ce 256 PANTHER PTHR11820:SF8 21 250 1.7E-123 T 22-04-2016 RPIC12D_RS08200 c8a96a323443c98f6831916911a5f3ce 256 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 249 5.2E-116 T 22-04-2016 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68|UniPathway: UPA00208|UniPathway: UPA00208 RPIC12D_RS08200 c8a96a323443c98f6831916911a5f3ce 256 PANTHER PTHR11820 21 250 1.7E-123 T 22-04-2016 RPIC12D_RS08200 c8a96a323443c98f6831916911a5f3ce 256 Gene3D G3DSA:3.90.850.10 40 251 1.1E-77 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC12D_RS08200 c8a96a323443c98f6831916911a5f3ce 256 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 49 246 2.7E-60 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC12D_RS03150 c2aad290bce9384dc23087f935e23c18 302 Pfam PF03466 LysR substrate binding domain 87 290 1.1E-32 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS03150 c2aad290bce9384dc23087f935e23c18 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS03150 c2aad290bce9384dc23087f935e23c18 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS03150 c2aad290bce9384dc23087f935e23c18 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS03150 c2aad290bce9384dc23087f935e23c18 302 SUPERFAMILY SSF46785 1 85 9.09E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS03150 c2aad290bce9384dc23087f935e23c18 302 PANTHER PTHR30346 1 290 1.5E-75 T 22-04-2016 RPIC12D_RS03150 c2aad290bce9384dc23087f935e23c18 302 Gene3D G3DSA:1.10.10.10 1 85 4.1E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS03150 c2aad290bce9384dc23087f935e23c18 302 PANTHER PTHR30346:SF6 1 290 1.5E-75 T 22-04-2016 RPIC12D_RS03150 c2aad290bce9384dc23087f935e23c18 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.7E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS03150 c2aad290bce9384dc23087f935e23c18 302 Gene3D G3DSA:3.40.190.10 89 174 2.1E-16 T 22-04-2016 RPIC12D_RS03150 c2aad290bce9384dc23087f935e23c18 302 SUPERFAMILY SSF53850 91 289 4.34E-31 T 22-04-2016 RPIC12D_RS03150 c2aad290bce9384dc23087f935e23c18 302 Gene3D G3DSA:3.40.190.10 175 262 6.1E-18 T 22-04-2016 RPIC12D_RS07890 7c660f1b7080698f501974aa97df7e39 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 436 1.1E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS07890 7c660f1b7080698f501974aa97df7e39 453 SMART SM00387 337 452 4.0E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS07890 7c660f1b7080698f501974aa97df7e39 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 297 1.2E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS07890 7c660f1b7080698f501974aa97df7e39 453 Gene3D G3DSA:3.30.565.10 286 437 5.0E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS07890 7c660f1b7080698f501974aa97df7e39 453 SMART SM00304 187 239 1.6E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS07890 7c660f1b7080698f501974aa97df7e39 453 Pfam PF16524 Periplasmic domain of Sensor histidine kinase RisS 52 158 1.3E-37 T 22-04-2016 IPR032408 Sensor histidine kinase RisS, periplasmic domain RPIC12D_RS07890 7c660f1b7080698f501974aa97df7e39 453 SUPERFAMILY SSF55874 289 439 6.68E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS07890 7c660f1b7080698f501974aa97df7e39 453 Pfam PF00672 HAMP domain 168 235 5.2E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS07890 7c660f1b7080698f501974aa97df7e39 453 SUPERFAMILY SSF158472 189 236 6.67E-5 T 22-04-2016 RPIC12D_RS07890 7c660f1b7080698f501974aa97df7e39 453 SUPERFAMILY SSF47384 225 297 8.04E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS07890 7c660f1b7080698f501974aa97df7e39 453 SMART SM00388 240 299 5.6E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS07890 7c660f1b7080698f501974aa97df7e39 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 2.0E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS07890 7c660f1b7080698f501974aa97df7e39 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 2.0E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS07890 7c660f1b7080698f501974aa97df7e39 453 Gene3D G3DSA:1.10.287.130 230 285 6.8E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS07890 7c660f1b7080698f501974aa97df7e39 453 PANTHER PTHR24423 181 437 2.6E-49 T 22-04-2016 RPIC12D_RS07890 7c660f1b7080698f501974aa97df7e39 453 PANTHER PTHR24423 1 7 2.6E-49 T 22-04-2016 RPIC12D_RS02350 3a455a37d2b71027e74e2e089b51a83f 358 SUPERFAMILY SSF53474 49 343 6.34E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS02350 3a455a37d2b71027e74e2e089b51a83f 358 Gene3D G3DSA:3.40.50.1820 62 197 2.4E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS02350 3a455a37d2b71027e74e2e089b51a83f 358 Gene3D G3DSA:3.40.50.1820 271 348 2.4E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS02350 3a455a37d2b71027e74e2e089b51a83f 358 PIRSF PIRSF005211 4 357 1.3E-107 T 22-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- RPIC12D_RS02350 3a455a37d2b71027e74e2e089b51a83f 358 PANTHER PTHR10794 22 347 6.8E-52 T 22-04-2016 RPIC12D_RS02350 3a455a37d2b71027e74e2e089b51a83f 358 Pfam PF00561 alpha/beta hydrolase fold 82 324 4.6E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS11795 f590da899407b8945ec018311c2c53dc 319 Pfam PF12706 Beta-lactamase superfamily domain 73 285 4.4E-15 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS11795 f590da899407b8945ec018311c2c53dc 319 Gene3D G3DSA:3.60.15.10 42 319 6.4E-51 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS11795 f590da899407b8945ec018311c2c53dc 319 SUPERFAMILY SSF56281 42 318 2.36E-46 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS11795 f590da899407b8945ec018311c2c53dc 319 PANTHER PTHR12553 253 319 1.0E-40 T 22-04-2016 RPIC12D_RS11795 f590da899407b8945ec018311c2c53dc 319 PANTHER PTHR12553 24 235 1.0E-40 T 22-04-2016 RPIC12D_RS07675 6901efe09c9dfe97b2e033148684098d 236 Pfam PF00005 ABC transporter 28 177 3.9E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS07675 6901efe09c9dfe97b2e033148684098d 236 PANTHER PTHR24220 10 236 2.8E-98 T 22-04-2016 RPIC12D_RS07675 6901efe09c9dfe97b2e033148684098d 236 SUPERFAMILY SSF52540 8 231 1.08E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07675 6901efe09c9dfe97b2e033148684098d 236 Gene3D G3DSA:3.40.50.300 8 231 1.8E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07675 6901efe09c9dfe97b2e033148684098d 236 SMART SM00382 37 230 1.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS07675 6901efe09c9dfe97b2e033148684098d 236 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS07675 6901efe09c9dfe97b2e033148684098d 236 PANTHER PTHR24220:SF509 10 236 2.8E-98 T 22-04-2016 RPIC12D_RS00655 98b728ef4fa8c51883ee82a15a0d3a9e 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00655 98b728ef4fa8c51883ee82a15a0d3a9e 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00655 98b728ef4fa8c51883ee82a15a0d3a9e 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00655 98b728ef4fa8c51883ee82a15a0d3a9e 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00655 98b728ef4fa8c51883ee82a15a0d3a9e 237 Pfam PF00106 short chain dehydrogenase 11 197 8.9E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00655 98b728ef4fa8c51883ee82a15a0d3a9e 237 PANTHER PTHR24322 161 191 1.3E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00655 98b728ef4fa8c51883ee82a15a0d3a9e 237 PANTHER PTHR24322 14 136 1.3E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00655 98b728ef4fa8c51883ee82a15a0d3a9e 237 Gene3D G3DSA:3.40.50.720 3 237 2.0E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS00655 98b728ef4fa8c51883ee82a15a0d3a9e 237 PANTHER PTHR24322:SF540 161 191 1.3E-23 T 22-04-2016 RPIC12D_RS00655 98b728ef4fa8c51883ee82a15a0d3a9e 237 PANTHER PTHR24322:SF540 14 136 1.3E-23 T 22-04-2016 RPIC12D_RS00655 98b728ef4fa8c51883ee82a15a0d3a9e 237 SUPERFAMILY SSF51735 10 237 1.91E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS00215 b46e69de30b89980795cdcf5520e52b4 314 Pfam PF01435 Peptidase family M48 91 264 1.6E-29 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RPIC12D_RS00215 b46e69de30b89980795cdcf5520e52b4 314 Gene3D G3DSA:3.30.2010.10 87 165 5.9E-14 T 22-04-2016 RPIC12D_RS00215 b46e69de30b89980795cdcf5520e52b4 314 PANTHER PTHR22726 73 278 1.1E-52 T 22-04-2016 RPIC12D_RS00215 b46e69de30b89980795cdcf5520e52b4 314 PANTHER PTHR22726:SF1 73 278 1.1E-52 T 22-04-2016 RPIC12D_RS09240 11c98604e4e2af63102206e5b30b8987 403 Pfam PF11062 Protein of unknown function (DUF2863) 5 402 7.5E-181 T 22-04-2016 IPR021292 Protein of unknown function DUF2863 RPIC12D_RS04390 14b0bdfb286c2b5bb734b029e3b33c26 313 PANTHER PTHR38684 2 267 4.1E-27 T 22-04-2016 RPIC12D_RS04390 14b0bdfb286c2b5bb734b029e3b33c26 313 PANTHER PTHR38684 284 313 4.1E-27 T 22-04-2016 RPIC12D_RS04390 14b0bdfb286c2b5bb734b029e3b33c26 313 Pfam PF03186 CobD/Cbib protein 28 255 5.1E-23 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RPIC12D_RS04390 14b0bdfb286c2b5bb734b029e3b33c26 313 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 313 63.747 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RPIC12D_RS14270 2d81191f7e87707ed792584fa4560035 351 Pfam PF00589 Phage integrase family 167 334 4.4E-30 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS14270 2d81191f7e87707ed792584fa4560035 351 Gene3D G3DSA:1.10.443.10 166 341 1.0E-38 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS14270 2d81191f7e87707ed792584fa4560035 351 SUPERFAMILY SSF56349 59 340 1.06E-62 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC12D_RS14270 2d81191f7e87707ed792584fa4560035 351 Gene3D G3DSA:1.10.150.130 60 159 5.6E-9 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC12D_RS14270 2d81191f7e87707ed792584fa4560035 351 PANTHER PTHR30349:SF20 64 345 1.4E-44 T 22-04-2016 RPIC12D_RS14270 2d81191f7e87707ed792584fa4560035 351 PANTHER PTHR30349 64 345 1.4E-44 T 22-04-2016 RPIC12D_RS08885 335444e26f54a4d2cf8f784bf36f410f 522 PANTHER PTHR30290 289 503 1.3E-111 T 22-04-2016 RPIC12D_RS08885 335444e26f54a4d2cf8f784bf36f410f 522 PANTHER PTHR30290 23 272 1.3E-111 T 22-04-2016 RPIC12D_RS08885 335444e26f54a4d2cf8f784bf36f410f 522 Gene3D G3DSA:3.40.190.10 169 300 1.7E-38 T 22-04-2016 RPIC12D_RS08885 335444e26f54a4d2cf8f784bf36f410f 522 PIRSF PIRSF002741 15 518 1.1E-101 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RPIC12D_RS08885 335444e26f54a4d2cf8f784bf36f410f 522 Gene3D G3DSA:3.90.76.10 34 168 2.7E-34 T 22-04-2016 RPIC12D_RS08885 335444e26f54a4d2cf8f784bf36f410f 522 SUPERFAMILY SSF53850 19 503 1.81E-125 T 22-04-2016 RPIC12D_RS08885 335444e26f54a4d2cf8f784bf36f410f 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 64 431 1.5E-91 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RPIC12D_RS08885 335444e26f54a4d2cf8f784bf36f410f 522 Gene3D G3DSA:3.10.105.10 301 492 1.5E-53 T 22-04-2016 RPIC12D_RS06635 1566d122da657d1a78e7e7aef7e1821f 299 PANTHER PTHR30465:SF57 13 298 1.4E-192 T 22-04-2016 RPIC12D_RS06635 1566d122da657d1a78e7e7aef7e1821f 299 PANTHER PTHR30465 13 298 1.4E-192 T 22-04-2016 RPIC12D_RS06635 1566d122da657d1a78e7e7aef7e1821f 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 297 2.1E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS06635 1566d122da657d1a78e7e7aef7e1821f 299 SUPERFAMILY SSF161098 91 281 1.31E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS06635 1566d122da657d1a78e7e7aef7e1821f 299 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 20 73 1.8E-13 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RPIC12D_RS06635 1566d122da657d1a78e7e7aef7e1821f 299 Gene3D G3DSA:1.10.3720.10 87 294 6.2E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS08050 fb2942d6e2de62edc512bd8bc20f1b25 195 PANTHER PTHR22769:SF17 1 167 2.4E-74 T 22-04-2016 RPIC12D_RS08050 fb2942d6e2de62edc512bd8bc20f1b25 195 PRINTS PR00502 NUDIX hydrolase family signature 79 94 3.0E-5 T 22-04-2016 IPR020476 NUDIX hydrolase RPIC12D_RS08050 fb2942d6e2de62edc512bd8bc20f1b25 195 PRINTS PR00502 NUDIX hydrolase family signature 65 79 3.0E-5 T 22-04-2016 IPR020476 NUDIX hydrolase RPIC12D_RS08050 fb2942d6e2de62edc512bd8bc20f1b25 195 Gene3D G3DSA:3.90.79.10 36 165 2.3E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS08050 fb2942d6e2de62edc512bd8bc20f1b25 195 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RPIC12D_RS08050 fb2942d6e2de62edc512bd8bc20f1b25 195 Gene3D G3DSA:2.20.70.10 1 34 1.2E-18 T 22-04-2016 RPIC12D_RS08050 fb2942d6e2de62edc512bd8bc20f1b25 195 Pfam PF00293 NUDIX domain 38 141 9.7E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC12D_RS08050 fb2942d6e2de62edc512bd8bc20f1b25 195 PANTHER PTHR22769 1 167 2.4E-74 T 22-04-2016 RPIC12D_RS08050 fb2942d6e2de62edc512bd8bc20f1b25 195 Pfam PF14803 Nudix N-terminal 2 34 8.8E-17 T 22-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- RPIC12D_RS08050 fb2942d6e2de62edc512bd8bc20f1b25 195 SUPERFAMILY SSF55811 2 162 1.35E-40 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS02635 6a159c2601bf42c727ef8519c74aa606 528 Pfam PF00463 Isocitrate lyase family 98 266 1.6E-21 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RPIC12D_RS02635 6a159c2601bf42c727ef8519c74aa606 528 Pfam PF00463 Isocitrate lyase family 327 388 3.0E-8 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RPIC12D_RS02635 6a159c2601bf42c727ef8519c74aa606 528 Pfam PF00463 Isocitrate lyase family 439 527 1.0E-12 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RPIC12D_RS02635 6a159c2601bf42c727ef8519c74aa606 528 Gene3D G3DSA:3.20.20.60 300 389 4.1E-140 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS02635 6a159c2601bf42c727ef8519c74aa606 528 Gene3D G3DSA:3.20.20.60 426 511 4.1E-140 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS02635 6a159c2601bf42c727ef8519c74aa606 528 Gene3D G3DSA:3.20.20.60 3 267 4.1E-140 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS02635 6a159c2601bf42c727ef8519c74aa606 528 SUPERFAMILY SSF51621 4 389 3.05E-127 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS02635 6a159c2601bf42c727ef8519c74aa606 528 SUPERFAMILY SSF51621 426 511 3.05E-127 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS02635 6a159c2601bf42c727ef8519c74aa606 528 PANTHER PTHR21631 165 263 1.6E-77 T 22-04-2016 RPIC12D_RS02635 6a159c2601bf42c727ef8519c74aa606 528 PANTHER PTHR21631 443 528 1.6E-77 T 22-04-2016 RPIC12D_RS02635 6a159c2601bf42c727ef8519c74aa606 528 PANTHER PTHR21631 314 406 1.6E-77 T 22-04-2016 RPIC12D_RS02635 6a159c2601bf42c727ef8519c74aa606 528 PANTHER PTHR21631 96 144 1.6E-77 T 22-04-2016 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 Pfam PF00391 PEP-utilising enzyme, mobile domain 423 494 6.6E-21 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 49 65 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 Gene3D G3DSA:3.30.1340.10 160 235 4.2E-24 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 Pfam PF00381 PTS HPr component phosphorylation site 160 235 1.1E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 SUPERFAMILY SSF47831 311 409 8.37E-22 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 SUPERFAMILY SSF55594 160 238 6.28E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 Gene3D G3DSA:3.40.930.10 3 142 4.1E-38 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 522 808 1.7E-104 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 Gene3D G3DSA:3.20.20.60 524 832 1.5E-101 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 SUPERFAMILY SSF55804 5 142 4.97E-36 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 SUPERFAMILY SSF51621 523 816 1.86E-101 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 562 581 3.2E-20 T 22-04-2016 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 767 779 3.2E-20 T 22-04-2016 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 731 746 3.2E-20 T 22-04-2016 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 714 729 3.2E-20 T 22-04-2016 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 8 142 7.6E-32 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 714 732 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 Gene3D G3DSA:1.10.274.10 312 399 6.2E-25 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 274 831 7.9E-139 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 Pfam PF05524 PEP-utilising enzyme, N-terminal 276 394 2.0E-18 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 PANTHER PTHR22931:SF15 310 817 2.1E-234 T 22-04-2016 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 170 177 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 160 235 5.3E-16 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 453 464 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 Gene3D G3DSA:3.50.30.10 400 520 3.9E-34 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 SUPERFAMILY SSF52009 394 513 1.96E-29 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 PANTHER PTHR22931 310 817 2.1E-234 T 22-04-2016 RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 PRINTS PR00107 Phosphocarrier protein signature 210 227 1.0E-12 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 PRINTS PR00107 Phosphocarrier protein signature 195 210 1.0E-12 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC12D_RS13715 e383759b283f45fd21b42cda3bc2314e 846 PRINTS PR00107 Phosphocarrier protein signature 170 186 1.0E-12 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC12D_RS09115 d61ef0549bab0d6a54a16c972ea24490 290 Pfam PF01039 Carboxyl transferase domain 108 242 1.1E-13 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS09115 d61ef0549bab0d6a54a16c972ea24490 290 SUPERFAMILY SSF52096 27 284 1.4E-85 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS09115 d61ef0549bab0d6a54a16c972ea24490 290 PANTHER PTHR22855 1 286 3.2E-154 T 22-04-2016 RPIC12D_RS09115 d61ef0549bab0d6a54a16c972ea24490 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 5.5E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS09115 d61ef0549bab0d6a54a16c972ea24490 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 5.5E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS09115 d61ef0549bab0d6a54a16c972ea24490 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 5.5E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS09115 d61ef0549bab0d6a54a16c972ea24490 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 5.5E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS09115 d61ef0549bab0d6a54a16c972ea24490 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 5.5E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS09115 d61ef0549bab0d6a54a16c972ea24490 290 Gene3D G3DSA:3.90.226.10 21 288 3.4E-72 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS09115 d61ef0549bab0d6a54a16c972ea24490 290 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 285 5.9E-129 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS09115 d61ef0549bab0d6a54a16c972ea24490 290 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 283 38.037 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS09115 d61ef0549bab0d6a54a16c972ea24490 290 PANTHER PTHR22855:SF17 1 286 3.2E-154 T 22-04-2016 RPIC12D_RS06350 03fa85b78455cf5c88ea6a0846d72496 481 Gene3D G3DSA:3.90.1380.10 1 82 8.8E-32 T 22-04-2016 IPR029144 Threonine synthase, N-terminal RPIC12D_RS06350 03fa85b78455cf5c88ea6a0846d72496 481 Gene3D G3DSA:3.40.50.1100 123 215 1.3E-6 T 22-04-2016 RPIC12D_RS06350 03fa85b78455cf5c88ea6a0846d72496 481 SUPERFAMILY SSF53686 1 479 7.04E-150 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC12D_RS06350 03fa85b78455cf5c88ea6a0846d72496 481 Pfam PF14821 Threonine synthase N terminus 2 79 1.3E-29 T 22-04-2016 IPR029144 Threonine synthase, N-terminal RPIC12D_RS06350 03fa85b78455cf5c88ea6a0846d72496 481 Gene3D G3DSA:3.40.50.1100 216 451 3.1E-86 T 22-04-2016 RPIC12D_RS06350 03fa85b78455cf5c88ea6a0846d72496 481 PANTHER PTHR10314 379 479 5.7E-118 T 22-04-2016 RPIC12D_RS06350 03fa85b78455cf5c88ea6a0846d72496 481 PANTHER PTHR10314 53 346 5.7E-118 T 22-04-2016 RPIC12D_RS06350 03fa85b78455cf5c88ea6a0846d72496 481 PANTHER PTHR10314 25 36 5.7E-118 T 22-04-2016 RPIC12D_RS06350 03fa85b78455cf5c88ea6a0846d72496 481 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 97 343 2.0E-12 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC12D_RS06350 03fa85b78455cf5c88ea6a0846d72496 481 TIGRFAM TIGR00260 thrC: threonine synthase 108 440 7.2E-67 T 22-04-2016 IPR004450 Threonine synthase-like RPIC12D_RS06350 03fa85b78455cf5c88ea6a0846d72496 481 PANTHER PTHR10314:SF1 379 479 5.7E-118 T 22-04-2016 RPIC12D_RS06350 03fa85b78455cf5c88ea6a0846d72496 481 PANTHER PTHR10314:SF1 53 346 5.7E-118 T 22-04-2016 RPIC12D_RS06350 03fa85b78455cf5c88ea6a0846d72496 481 PANTHER PTHR10314:SF1 25 36 5.7E-118 T 22-04-2016 RPIC12D_RS07345 30df1aabb6934c1bc121550c4d889b04 139 Pfam PF07238 PilZ domain 37 122 1.4E-7 T 22-04-2016 IPR009875 PilZ domain GO:0035438 RPIC12D_RS02160 da6bebf44cf5b7ec9b99366bd83618c4 836 Pfam PF09317 Domain of unknown function (DUF1974) 518 808 3.2E-108 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 RPIC12D_RS02160 da6bebf44cf5b7ec9b99366bd83618c4 836 PANTHER PTHR10909 53 537 5.7E-223 T 22-04-2016 RPIC12D_RS02160 da6bebf44cf5b7ec9b99366bd83618c4 836 SUPERFAMILY SSF47203 364 511 5.15E-30 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS02160 da6bebf44cf5b7ec9b99366bd83618c4 836 Gene3D G3DSA:1.20.140.10 354 511 5.8E-32 T 22-04-2016 RPIC12D_RS02160 da6bebf44cf5b7ec9b99366bd83618c4 836 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 140 237 6.3E-20 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS02160 da6bebf44cf5b7ec9b99366bd83618c4 836 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 241 332 3.0E-8 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC12D_RS02160 da6bebf44cf5b7ec9b99366bd83618c4 836 Gene3D G3DSA:2.40.110.10 241 353 1.0E-15 T 22-04-2016 RPIC12D_RS02160 da6bebf44cf5b7ec9b99366bd83618c4 836 PANTHER PTHR10909:SF283 53 537 5.7E-223 T 22-04-2016 RPIC12D_RS02160 da6bebf44cf5b7ec9b99366bd83618c4 836 SUPERFAMILY SSF56645 100 374 2.49E-45 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC12D_RS02160 da6bebf44cf5b7ec9b99366bd83618c4 836 Gene3D G3DSA:1.10.540.10 99 238 6.3E-32 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS02160 da6bebf44cf5b7ec9b99366bd83618c4 836 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 364 508 2.9E-19 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS08620 33fb9c762b6ecbb45b938afaee011bc5 723 SUPERFAMILY SSF140356 9 110 4.97E-33 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 RPIC12D_RS08620 33fb9c762b6ecbb45b938afaee011bc5 723 Gene3D G3DSA:3.30.1840.10 112 303 1.4E-64 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 RPIC12D_RS08620 33fb9c762b6ecbb45b938afaee011bc5 723 Pfam PF13090 Polyphosphate kinase C-terminal domain 334 685 3.2E-156 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 RPIC12D_RS08620 33fb9c762b6ecbb45b938afaee011bc5 723 PANTHER PTHR30218 10 713 0.0 T 22-04-2016 RPIC12D_RS08620 33fb9c762b6ecbb45b938afaee011bc5 723 Pfam PF02503 Polyphosphate kinase middle domain 124 324 2.7E-56 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 RPIC12D_RS08620 33fb9c762b6ecbb45b938afaee011bc5 723 Gene3D G3DSA:3.30.870.10 318 510 2.5E-80 T 22-04-2016 RPIC12D_RS08620 33fb9c762b6ecbb45b938afaee011bc5 723 SUPERFAMILY SSF143724 112 317 1.31E-59 T 22-04-2016 RPIC12D_RS08620 33fb9c762b6ecbb45b938afaee011bc5 723 SUPERFAMILY SSF56024 510 690 8.07E-71 T 22-04-2016 RPIC12D_RS08620 33fb9c762b6ecbb45b938afaee011bc5 723 PIRSF PIRSF015589 4 705 1.2E-266 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RPIC12D_RS08620 33fb9c762b6ecbb45b938afaee011bc5 723 SUPERFAMILY SSF56024 318 505 4.08E-57 T 22-04-2016 RPIC12D_RS08620 33fb9c762b6ecbb45b938afaee011bc5 723 PANTHER PTHR30218:SF0 10 713 0.0 T 22-04-2016 RPIC12D_RS08620 33fb9c762b6ecbb45b938afaee011bc5 723 Gene3D G3DSA:3.30.870.10 511 691 1.2E-73 T 22-04-2016 RPIC12D_RS08620 33fb9c762b6ecbb45b938afaee011bc5 723 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 9 687 1.6E-293 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RPIC12D_RS08620 33fb9c762b6ecbb45b938afaee011bc5 723 Pfam PF13089 Polyphosphate kinase N-terminal domain 10 114 2.5E-33 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 RPIC12D_RS08620 33fb9c762b6ecbb45b938afaee011bc5 723 Hamap MF_00347 Polyphosphate kinase [ppk]. 6 692 32.443 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RPIC12D_RS09665 9cf3e86ed6c614eb240a91d4ef807843 366 Pfam PF12727 PBP superfamily domain 133 323 3.1E-49 T 22-04-2016 IPR024370 PBP domain RPIC12D_RS09665 9cf3e86ed6c614eb240a91d4ef807843 366 PANTHER PTHR38431 117 351 2.2E-25 T 22-04-2016 RPIC12D_RS09665 9cf3e86ed6c614eb240a91d4ef807843 366 Gene3D G3DSA:3.40.190.10 263 319 2.8E-6 T 22-04-2016 RPIC12D_RS09665 9cf3e86ed6c614eb240a91d4ef807843 366 SUPERFAMILY SSF53850 117 327 2.17E-9 T 22-04-2016 RPIC12D_RS09665 9cf3e86ed6c614eb240a91d4ef807843 366 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 81 7.2E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS09665 9cf3e86ed6c614eb240a91d4ef807843 366 SUPERFAMILY SSF46785 5 136 9.52E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS09665 9cf3e86ed6c614eb240a91d4ef807843 366 Gene3D G3DSA:1.10.10.10 3 122 3.3E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS09765 27c8ba00d367b0f3a78de1d11bc1ed2b 356 Gene3D G3DSA:2.40.160.10 28 356 6.3E-84 T 22-04-2016 IPR023614 Porin domain RPIC12D_RS09765 27c8ba00d367b0f3a78de1d11bc1ed2b 356 SUPERFAMILY SSF56935 28 356 1.62E-76 T 22-04-2016 RPIC12D_RS09765 27c8ba00d367b0f3a78de1d11bc1ed2b 356 Pfam PF13609 Gram-negative porin 15 341 1.3E-60 T 22-04-2016 RPIC12D_RS14715 6e5e9cb868317d88c10a595139b93672 89 Pfam PF00366 Ribosomal protein S17 14 80 4.4E-32 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14715 6e5e9cb868317d88c10a595139b93672 89 Gene3D G3DSA:2.40.50.140 9 86 6.7E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS14715 6e5e9cb868317d88c10a595139b93672 89 ProSitePatterns PS00056 Ribosomal protein S17 signature. 60 72 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14715 6e5e9cb868317d88c10a595139b93672 89 PANTHER PTHR10744 10 87 1.1E-38 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14715 6e5e9cb868317d88c10a595139b93672 89 SUPERFAMILY SSF50249 9 87 9.42E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS14715 6e5e9cb868317d88c10a595139b93672 89 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 9 79 5.1E-36 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14715 6e5e9cb868317d88c10a595139b93672 89 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 85 24.943 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14715 6e5e9cb868317d88c10a595139b93672 89 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 9 79 6.0E-33 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14715 6e5e9cb868317d88c10a595139b93672 89 PRINTS PR00973 Ribosomal protein S17 family signature 28 51 2.4E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14715 6e5e9cb868317d88c10a595139b93672 89 PRINTS PR00973 Ribosomal protein S17 family signature 60 70 2.4E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14715 6e5e9cb868317d88c10a595139b93672 89 PRINTS PR00973 Ribosomal protein S17 family signature 70 77 2.4E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS06705 3081fc6773d8aed695e5e6ffd08c5d2a 404 SUPERFAMILY SSF64383 249 386 3.53E-23 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RPIC12D_RS06705 3081fc6773d8aed695e5e6ffd08c5d2a 404 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 256 376 1.3E-10 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RPIC12D_RS06705 3081fc6773d8aed695e5e6ffd08c5d2a 404 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 256 379 6.0E-6 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RPIC12D_RS06705 3081fc6773d8aed695e5e6ffd08c5d2a 404 SMART SM00771 250 379 1.1E-34 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RPIC12D_RS06705 3081fc6773d8aed695e5e6ffd08c5d2a 404 Gene3D G3DSA:3.30.1400.10 249 385 1.4E-24 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RPIC12D_RS16420 0c28667d521e89976ecb066f407e759a 488 Pfam PF07690 Major Facilitator Superfamily 24 427 2.4E-40 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS16420 0c28667d521e89976ecb066f407e759a 488 Gene3D G3DSA:1.20.1250.20 272 470 2.7E-11 T 22-04-2016 RPIC12D_RS16420 0c28667d521e89976ecb066f407e759a 488 Gene3D G3DSA:1.20.1250.20 12 202 1.6E-29 T 22-04-2016 RPIC12D_RS16420 0c28667d521e89976ecb066f407e759a 488 PANTHER PTHR23501:SF26 14 436 9.6E-113 T 22-04-2016 RPIC12D_RS16420 0c28667d521e89976ecb066f407e759a 488 SUPERFAMILY SSF103473 9 201 1.14E-40 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS16420 0c28667d521e89976ecb066f407e759a 488 SUPERFAMILY SSF103473 212 468 8.76E-15 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS16420 0c28667d521e89976ecb066f407e759a 488 PANTHER PTHR23501 14 436 9.6E-113 T 22-04-2016 RPIC12D_RS15755 603eeab225a724f860be8cb19347ae7f 175 PIRSF PIRSF017306 9 167 1.9E-44 T 22-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 RPIC12D_RS15755 603eeab225a724f860be8cb19347ae7f 175 PANTHER PTHR21221 1 162 1.4E-53 T 22-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 RPIC12D_RS15755 603eeab225a724f860be8cb19347ae7f 175 Pfam PF04115 Ureidoglycolate lyase 10 164 5.3E-55 T 22-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 RPIC12D_RS15755 603eeab225a724f860be8cb19347ae7f 175 PANTHER PTHR21221:SF2 1 162 1.4E-53 T 22-04-2016 RPIC12D_RS15755 603eeab225a724f860be8cb19347ae7f 175 Gene3D G3DSA:2.60.120.480 10 168 4.5E-63 T 22-04-2016 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 RPIC12D_RS15755 603eeab225a724f860be8cb19347ae7f 175 Hamap MF_00616 Ureidoglycolate lyase [allA]. 9 168 40.641 T 22-04-2016 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 RPIC12D_RS15755 603eeab225a724f860be8cb19347ae7f 175 SUPERFAMILY SSF51182 10 165 1.29E-59 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS05380 2b0012b89513a3c02109ffe66eacd47e 280 PANTHER PTHR21496:SF10 12 277 6.5E-84 T 22-04-2016 RPIC12D_RS05380 2b0012b89513a3c02109ffe66eacd47e 280 Pfam PF04305 Protein of unknown function (DUF455) 26 273 1.2E-95 T 22-04-2016 IPR007402 Protein of unknown function DUF455 RPIC12D_RS05380 2b0012b89513a3c02109ffe66eacd47e 280 PIRSF PIRSF012318 8 280 6.5E-104 T 22-04-2016 IPR011197 Uncharacterised conserved protein UCP012318 RPIC12D_RS05380 2b0012b89513a3c02109ffe66eacd47e 280 PANTHER PTHR21496 12 277 6.5E-84 T 22-04-2016 RPIC12D_RS05380 2b0012b89513a3c02109ffe66eacd47e 280 SUPERFAMILY SSF47240 78 255 2.16E-19 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC12D_RS01845 1bf2938c920a26c024ec73ad57ee2074 433 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 53 181 3.8E-55 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 RPIC12D_RS01845 1bf2938c920a26c024ec73ad57ee2074 433 Gene3D G3DSA:3.40.50.720 199 432 4.4E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS01845 1bf2938c920a26c024ec73ad57ee2074 433 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 199 430 6.7E-79 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 RPIC12D_RS01845 1bf2938c920a26c024ec73ad57ee2074 433 Gene3D G3DSA:3.40.192.10 57 197 3.0E-58 T 22-04-2016 RPIC12D_RS01845 1bf2938c920a26c024ec73ad57ee2074 433 SMART SM00839 201 430 1.0E-104 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 RPIC12D_RS01845 1bf2938c920a26c024ec73ad57ee2074 433 PANTHER PTHR11606 48 431 4.2E-184 T 22-04-2016 RPIC12D_RS01845 1bf2938c920a26c024ec73ad57ee2074 433 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 110 124 1.1E-32 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RPIC12D_RS01845 1bf2938c920a26c024ec73ad57ee2074 433 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 358 369 1.1E-32 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RPIC12D_RS01845 1bf2938c920a26c024ec73ad57ee2074 433 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 232 252 1.1E-32 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RPIC12D_RS01845 1bf2938c920a26c024ec73ad57ee2074 433 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 190 212 1.1E-32 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RPIC12D_RS01845 1bf2938c920a26c024ec73ad57ee2074 433 PIRSF PIRSF000185 27 433 1.3E-163 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 RPIC12D_RS01845 1bf2938c920a26c024ec73ad57ee2074 433 SUPERFAMILY SSF51735 199 432 2.11E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS01845 1bf2938c920a26c024ec73ad57ee2074 433 SUPERFAMILY SSF53223 19 201 8.32E-69 T 22-04-2016 RPIC12D_RS01845 1bf2938c920a26c024ec73ad57ee2074 433 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 118 131 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RPIC12D_RS12730 6fdcbe856f69e051bf69cfd2bd414d95 315 Gene3D G3DSA:3.40.190.10 90 175 1.7E-20 T 22-04-2016 RPIC12D_RS12730 6fdcbe856f69e051bf69cfd2bd414d95 315 Gene3D G3DSA:3.40.190.10 176 275 8.5E-35 T 22-04-2016 RPIC12D_RS12730 6fdcbe856f69e051bf69cfd2bd414d95 315 PANTHER PTHR30346:SF15 1 299 3.3E-96 T 22-04-2016 RPIC12D_RS12730 6fdcbe856f69e051bf69cfd2bd414d95 315 SUPERFAMILY SSF53850 88 300 3.04E-41 T 22-04-2016 RPIC12D_RS12730 6fdcbe856f69e051bf69cfd2bd414d95 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12730 6fdcbe856f69e051bf69cfd2bd414d95 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12730 6fdcbe856f69e051bf69cfd2bd414d95 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12730 6fdcbe856f69e051bf69cfd2bd414d95 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.8E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12730 6fdcbe856f69e051bf69cfd2bd414d95 315 Gene3D G3DSA:1.10.10.10 1 83 1.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12730 6fdcbe856f69e051bf69cfd2bd414d95 315 SUPERFAMILY SSF46785 1 82 3.15E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12730 6fdcbe856f69e051bf69cfd2bd414d95 315 Pfam PF03466 LysR substrate binding domain 89 297 6.1E-47 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS12730 6fdcbe856f69e051bf69cfd2bd414d95 315 PANTHER PTHR30346 1 299 3.3E-96 T 22-04-2016 RPIC12D_RS15640 17619e08d1486bef754f35f0cc3978f7 404 Pfam PF00589 Phage integrase family 212 362 5.1E-14 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS15640 17619e08d1486bef754f35f0cc3978f7 404 Pfam PF13356 Domain of unknown function (DUF4102) 3 86 4.9E-20 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 RPIC12D_RS15640 17619e08d1486bef754f35f0cc3978f7 404 Gene3D G3DSA:1.10.443.10 213 377 2.3E-23 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS15640 17619e08d1486bef754f35f0cc3978f7 404 PANTHER PTHR30629 1 393 5.8E-118 T 22-04-2016 RPIC12D_RS15640 17619e08d1486bef754f35f0cc3978f7 404 SUPERFAMILY SSF56349 99 381 2.24E-58 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC12D_RS15640 17619e08d1486bef754f35f0cc3978f7 404 Gene3D G3DSA:1.10.150.130 99 196 2.1E-19 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC12D_RS15640 17619e08d1486bef754f35f0cc3978f7 404 PANTHER PTHR30629:SF3 1 393 5.8E-118 T 22-04-2016 RPIC12D_RS05300 fc6402e8129165d7a532f4ac4e671ebc 242 Gene3D G3DSA:3.40.50.300 20 240 9.3E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05300 fc6402e8129165d7a532f4ac4e671ebc 242 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS05300 fc6402e8129165d7a532f4ac4e671ebc 242 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 20 239 3.4E-95 T 22-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 RPIC12D_RS05300 fc6402e8129165d7a532f4ac4e671ebc 242 SUPERFAMILY SSF52540 21 240 5.06E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05300 fc6402e8129165d7a532f4ac4e671ebc 242 PANTHER PTHR24220 22 241 2.2E-111 T 22-04-2016 RPIC12D_RS05300 fc6402e8129165d7a532f4ac4e671ebc 242 PANTHER PTHR24220:SF111 22 241 2.2E-111 T 22-04-2016 RPIC12D_RS05300 fc6402e8129165d7a532f4ac4e671ebc 242 Pfam PF00005 ABC transporter 40 188 5.4E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS05300 fc6402e8129165d7a532f4ac4e671ebc 242 SMART SM00382 49 237 2.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS10100 de0d19954238354beab09584c884a560 260 PANTHER PTHR10730:SF27 8 171 8.0E-20 T 22-04-2016 RPIC12D_RS10100 de0d19954238354beab09584c884a560 260 PANTHER PTHR10730 8 171 8.0E-20 T 22-04-2016 RPIC12D_RS10100 de0d19954238354beab09584c884a560 260 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 6 181 2.0E-27 T 22-04-2016 IPR002654 Glycosyl transferase, family 25 RPIC12D_RS04675 6edd072b53779fc9dfcaa66dd3b9cb44 214 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.444 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RPIC12D_RS04675 6edd072b53779fc9dfcaa66dd3b9cb44 214 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.8E-18 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RPIC12D_RS04675 6edd072b53779fc9dfcaa66dd3b9cb44 214 SMART SM00478 38 185 1.4E-55 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RPIC12D_RS04675 6edd072b53779fc9dfcaa66dd3b9cb44 214 PANTHER PTHR10359:SF18 8 209 4.2E-88 T 22-04-2016 RPIC12D_RS04675 6edd072b53779fc9dfcaa66dd3b9cb44 214 SUPERFAMILY SSF48150 2 208 1.07E-71 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC12D_RS04675 6edd072b53779fc9dfcaa66dd3b9cb44 214 Gene3D G3DSA:1.10.1670.10 123 207 4.6E-35 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RPIC12D_RS04675 6edd072b53779fc9dfcaa66dd3b9cb44 214 TIGRFAM TIGR01083 nth: endonuclease III 5 194 2.0E-86 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RPIC12D_RS04675 6edd072b53779fc9dfcaa66dd3b9cb44 214 Gene3D G3DSA:1.10.340.30 22 122 2.0E-34 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC12D_RS04675 6edd072b53779fc9dfcaa66dd3b9cb44 214 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.2E-7 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 RPIC12D_RS04675 6edd072b53779fc9dfcaa66dd3b9cb44 214 PANTHER PTHR10359 8 209 4.2E-88 T 22-04-2016 RPIC12D_RS04675 6edd072b53779fc9dfcaa66dd3b9cb44 214 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 RPIC12D_RS04675 6edd072b53779fc9dfcaa66dd3b9cb44 214 PIRSF PIRSF001435 1 210 1.9E-52 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RPIC12D_RS15540 c8e001b6d0b19f98a65f07725dff8a8f 153 PANTHER PTHR33164:SF5 1 145 4.8E-54 T 22-04-2016 RPIC12D_RS15540 c8e001b6d0b19f98a65f07725dff8a8f 153 Pfam PF01047 MarR family 43 101 2.1E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS15540 c8e001b6d0b19f98a65f07725dff8a8f 153 PANTHER PTHR33164 1 145 4.8E-54 T 22-04-2016 RPIC12D_RS15540 c8e001b6d0b19f98a65f07725dff8a8f 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 96 112 6.5E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS15540 c8e001b6d0b19f98a65f07725dff8a8f 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 77 92 6.5E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS15540 c8e001b6d0b19f98a65f07725dff8a8f 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 60 76 6.5E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS15540 c8e001b6d0b19f98a65f07725dff8a8f 153 Gene3D G3DSA:1.10.10.10 3 148 4.2E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS15540 c8e001b6d0b19f98a65f07725dff8a8f 153 SMART SM00347 36 137 7.9E-27 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS15540 c8e001b6d0b19f98a65f07725dff8a8f 153 SUPERFAMILY SSF46785 11 147 4.8E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08380 ddd48237d72755af14abf6d849f9294e 197 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 RPIC12D_RS08380 ddd48237d72755af14abf6d849f9294e 197 Gene3D G3DSA:3.40.50.360 1 196 1.8E-64 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC12D_RS08380 ddd48237d72755af14abf6d849f9294e 197 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 195 2.9E-41 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 RPIC12D_RS08380 ddd48237d72755af14abf6d849f9294e 197 Pfam PF03358 NADPH-dependent FMN reductase 11 140 2.3E-8 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RPIC12D_RS08380 ddd48237d72755af14abf6d849f9294e 197 PANTHER PTHR30546 1 197 2.9E-66 T 22-04-2016 RPIC12D_RS08380 ddd48237d72755af14abf6d849f9294e 197 SUPERFAMILY SSF52218 1 195 2.88E-57 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC12D_RS01875 0fe5696f3f5766802b2c0dbef75f4e2f 432 PANTHER PTHR12227:SF0 1 431 4.2E-120 T 22-04-2016 RPIC12D_RS01875 0fe5696f3f5766802b2c0dbef75f4e2f 432 Gene3D G3DSA:3.40.1480.10 251 431 8.3E-65 T 22-04-2016 IPR007835 MOFRL domain RPIC12D_RS01875 0fe5696f3f5766802b2c0dbef75f4e2f 432 Pfam PF05161 MOFRL family 317 425 1.2E-33 T 22-04-2016 IPR007835 MOFRL domain RPIC12D_RS01875 0fe5696f3f5766802b2c0dbef75f4e2f 432 Pfam PF13660 Domain of unknown function (DUF4147) 13 234 6.9E-74 T 22-04-2016 IPR025286 MOFRL-associated domain RPIC12D_RS01875 0fe5696f3f5766802b2c0dbef75f4e2f 432 Gene3D G3DSA:3.40.50.10180 12 250 5.3E-94 T 22-04-2016 RPIC12D_RS01875 0fe5696f3f5766802b2c0dbef75f4e2f 432 PANTHER PTHR12227 1 431 4.2E-120 T 22-04-2016 RPIC12D_RS01875 0fe5696f3f5766802b2c0dbef75f4e2f 432 SUPERFAMILY SSF82544 8 431 5.49E-137 T 22-04-2016 RPIC12D_RS12250 57117420e52270700dc4d10de2ead761 180 Pfam PF08534 Redoxin 35 163 2.1E-20 T 22-04-2016 IPR013740 Redoxin GO:0016491 RPIC12D_RS12250 57117420e52270700dc4d10de2ead761 180 PANTHER PTHR10681 3 176 2.7E-54 T 22-04-2016 RPIC12D_RS12250 57117420e52270700dc4d10de2ead761 180 Gene3D G3DSA:3.40.30.10 5 175 1.0E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS12250 57117420e52270700dc4d10de2ead761 180 ProSitePatterns PS00194 Thioredoxin family active site. 65 83 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RPIC12D_RS12250 57117420e52270700dc4d10de2ead761 180 PANTHER PTHR10681:SF107 3 176 2.7E-54 T 22-04-2016 RPIC12D_RS12250 57117420e52270700dc4d10de2ead761 180 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 10 171 1.3E-52 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 RPIC12D_RS12250 57117420e52270700dc4d10de2ead761 180 SUPERFAMILY SSF52833 8 167 7.86E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS05225 8155cd43a0dbf3247d5a724182db82b8 587 SUPERFAMILY SSF52540 168 396 3.1E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05225 8155cd43a0dbf3247d5a724182db82b8 587 SUPERFAMILY SSF52540 438 572 3.1E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05225 8155cd43a0dbf3247d5a724182db82b8 587 SUPERFAMILY SSF52540 6 125 3.1E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05225 8155cd43a0dbf3247d5a724182db82b8 587 Gene3D G3DSA:3.40.50.300 6 135 4.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05225 8155cd43a0dbf3247d5a724182db82b8 587 Gene3D G3DSA:3.40.50.300 178 267 4.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05225 8155cd43a0dbf3247d5a724182db82b8 587 PANTHER PTHR11070 6 572 2.4E-80 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC12D_RS05225 8155cd43a0dbf3247d5a724182db82b8 587 Pfam PF13361 UvrD-like helicase C-terminal domain 485 551 2.9E-21 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIC12D_RS05225 8155cd43a0dbf3247d5a724182db82b8 587 Gene3D G3DSA:3.40.50.300 492 573 4.4E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05225 8155cd43a0dbf3247d5a724182db82b8 587 Gene3D G3DSA:3.40.50.300 276 378 4.4E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05225 8155cd43a0dbf3247d5a724182db82b8 587 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 106 7.4E-13 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RPIC12D_RS05225 8155cd43a0dbf3247d5a724182db82b8 587 Pfam PF00580 UvrD/REP helicase N-terminal domain 174 264 1.8E-13 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RPIC12D_RS16655 e8270d7be2fc5cdf9b64b7a9c18eb6f6 159 PANTHER PTHR34109 6 145 6.5E-45 T 22-04-2016 RPIC12D_RS16655 e8270d7be2fc5cdf9b64b7a9c18eb6f6 159 SUPERFAMILY SSF54593 12 152 8.06E-34 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS16655 e8270d7be2fc5cdf9b64b7a9c18eb6f6 159 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 20 129 9.4E-6 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC12D_RS16655 e8270d7be2fc5cdf9b64b7a9c18eb6f6 159 Gene3D G3DSA:3.10.180.10 21 144 4.5E-28 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS16655 e8270d7be2fc5cdf9b64b7a9c18eb6f6 159 PANTHER PTHR34109:SF1 6 145 6.5E-45 T 22-04-2016 RPIC12D_RS15800 205b65655d09e9fceddf6efa91239eff 304 PIRSF PIRSF000103 1 303 1.2E-73 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 RPIC12D_RS15800 205b65655d09e9fceddf6efa91239eff 304 SUPERFAMILY SSF48179 174 301 1.25E-36 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS15800 205b65655d09e9fceddf6efa91239eff 304 PANTHER PTHR22981:SF70 8 303 6.3E-129 T 22-04-2016 RPIC12D_RS15800 205b65655d09e9fceddf6efa91239eff 304 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 8 303 1.5E-124 T 22-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 RPIC12D_RS15800 205b65655d09e9fceddf6efa91239eff 304 PANTHER PTHR22981 8 303 6.3E-129 T 22-04-2016 RPIC12D_RS15800 205b65655d09e9fceddf6efa91239eff 304 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 10 23 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 RPIC12D_RS15800 205b65655d09e9fceddf6efa91239eff 304 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 172 2.6E-48 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RPIC12D_RS15800 205b65655d09e9fceddf6efa91239eff 304 SUPERFAMILY SSF51735 7 172 7.25E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS15800 205b65655d09e9fceddf6efa91239eff 304 Gene3D G3DSA:1.10.1040.10 175 300 5.9E-42 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC12D_RS15800 205b65655d09e9fceddf6efa91239eff 304 Gene3D G3DSA:3.40.50.720 5 173 3.1E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS15800 205b65655d09e9fceddf6efa91239eff 304 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 175 294 1.2E-37 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 Gene3D G3DSA:1.10.340.30 312 432 1.2E-28 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 SUPERFAMILY SSF48150 301 481 3.31E-37 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 Gene3D G3DSA:3.30.310.20 196 311 5.5E-38 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 Pfam PF02805 Metal binding domain of Ada 7 71 2.4E-29 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 Gene3D G3DSA:1.10.10.60 138 185 2.5E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 Gene3D G3DSA:1.10.1670.10 433 481 7.2E-16 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 PANTHER PTHR10242 264 482 3.7E-72 T 22-04-2016 RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 PANTHER PTHR10242 197 239 3.7E-72 T 22-04-2016 RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 Gene3D G3DSA:1.10.10.60 86 137 6.3E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 137 179 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 SUPERFAMILY SSF46689 85 133 2.33E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 SUPERFAMILY SSF57884 2 76 3.66E-32 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 Pfam PF06029 AlkA N-terminal domain 196 311 9.3E-36 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 Gene3D G3DSA:3.40.10.10 2 76 2.5E-34 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 SUPERFAMILY SSF46689 137 186 2.87E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 PANTHER PTHR10242:SF3 264 482 3.7E-72 T 22-04-2016 RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 PANTHER PTHR10242:SF3 197 239 3.7E-72 T 22-04-2016 RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 SMART SM00342 100 183 2.3E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 SMART SM01009 196 311 4.8E-53 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 SMART SM00478 321 483 4.4E-6 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 Pfam PF12833 Helix-turn-helix domain 106 185 4.1E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS11865 d52c4d4f20de108232a3941d5af88693 491 SUPERFAMILY SSF55945 196 296 2.51E-29 T 22-04-2016 RPIC12D_RS04230 f08ac31b42d3acae1fc82407bed74d98 434 PANTHER PTHR21090:SF21 1 429 1.6E-190 T 22-04-2016 RPIC12D_RS04230 f08ac31b42d3acae1fc82407bed74d98 434 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 430 5.9E-139 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS04230 f08ac31b42d3acae1fc82407bed74d98 434 Gene3D G3DSA:3.65.10.10 240 428 6.6E-72 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RPIC12D_RS04230 f08ac31b42d3acae1fc82407bed74d98 434 SUPERFAMILY SSF55205 1 431 3.4E-128 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RPIC12D_RS04230 f08ac31b42d3acae1fc82407bed74d98 434 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 434 33.378 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS04230 f08ac31b42d3acae1fc82407bed74d98 434 Gene3D G3DSA:3.65.10.10 22 239 7.8E-71 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RPIC12D_RS04230 f08ac31b42d3acae1fc82407bed74d98 434 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 427 3.9E-129 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RPIC12D_RS04230 f08ac31b42d3acae1fc82407bed74d98 434 PANTHER PTHR21090 1 429 1.6E-190 T 22-04-2016 RPIC12D_RS04230 f08ac31b42d3acae1fc82407bed74d98 434 ProSitePatterns PS00104 EPSP synthase signature 1. 88 102 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS04230 f08ac31b42d3acae1fc82407bed74d98 434 ProSitePatterns PS00885 EPSP synthase signature 2. 345 363 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS04230 f08ac31b42d3acae1fc82407bed74d98 434 PIRSF PIRSF000505 5 434 3.7E-143 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS09995 1589d768cbfd15a73d577e6966ea4e84 143 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 13 132 32.623 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RPIC12D_RS09995 1589d768cbfd15a73d577e6966ea4e84 143 Pfam PF02142 MGS-like domain 26 119 5.2E-17 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC12D_RS09995 1589d768cbfd15a73d577e6966ea4e84 143 Gene3D G3DSA:3.40.50.1380 10 140 6.1E-59 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC12D_RS09995 1589d768cbfd15a73d577e6966ea4e84 143 PIRSF PIRSF006614 9 143 1.1E-57 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RPIC12D_RS09995 1589d768cbfd15a73d577e6966ea4e84 143 SUPERFAMILY SSF52335 10 135 1.01E-51 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC12D_RS09995 1589d768cbfd15a73d577e6966ea4e84 143 PANTHER PTHR30492 3 141 1.1E-61 T 22-04-2016 RPIC12D_RS09995 1589d768cbfd15a73d577e6966ea4e84 143 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 12 132 5.2E-53 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RPIC12D_RS09995 1589d768cbfd15a73d577e6966ea4e84 143 SMART SM00851 26 119 1.1E-24 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC12D_RS09995 1589d768cbfd15a73d577e6966ea4e84 143 ProSitePatterns PS01335 Methylglyoxal synthase active site. 66 74 - T 22-04-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RPIC12D_RS16105 842323bfe40185dcaa1c697bce3fff80 246 PANTHER PTHR24220:SF469 7 233 2.6E-85 T 22-04-2016 RPIC12D_RS16105 842323bfe40185dcaa1c697bce3fff80 246 Gene3D G3DSA:3.40.50.300 2 236 5.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16105 842323bfe40185dcaa1c697bce3fff80 246 Pfam PF00005 ABC transporter 21 173 1.4E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS16105 842323bfe40185dcaa1c697bce3fff80 246 SUPERFAMILY SSF52540 4 239 3.62E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16105 842323bfe40185dcaa1c697bce3fff80 246 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS16105 842323bfe40185dcaa1c697bce3fff80 246 PANTHER PTHR24220 7 233 2.6E-85 T 22-04-2016 RPIC12D_RS16105 842323bfe40185dcaa1c697bce3fff80 246 SMART SM00382 30 225 8.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS14300 8efa6d8f6e38fd77169d9d68d02a0f2f 202 PRINTS PR00162 Rieske 2Fe-2S subunit signature 124 135 2.9E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RPIC12D_RS14300 8efa6d8f6e38fd77169d9d68d02a0f2f 202 PRINTS PR00162 Rieske 2Fe-2S subunit signature 154 166 2.9E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RPIC12D_RS14300 8efa6d8f6e38fd77169d9d68d02a0f2f 202 PRINTS PR00162 Rieske 2Fe-2S subunit signature 167 179 2.9E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RPIC12D_RS14300 8efa6d8f6e38fd77169d9d68d02a0f2f 202 Gene3D G3DSA:2.102.10.10 16 199 4.7E-40 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC12D_RS14300 8efa6d8f6e38fd77169d9d68d02a0f2f 202 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 11 195 1.3E-60 T 22-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 RPIC12D_RS14300 8efa6d8f6e38fd77169d9d68d02a0f2f 202 PANTHER PTHR10134:SF8 1 199 2.3E-67 T 22-04-2016 RPIC12D_RS14300 8efa6d8f6e38fd77169d9d68d02a0f2f 202 Pfam PF00355 Rieske [2Fe-2S] domain 54 182 2.3E-12 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC12D_RS14300 8efa6d8f6e38fd77169d9d68d02a0f2f 202 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 1 40 1.0E-8 T 22-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 RPIC12D_RS14300 8efa6d8f6e38fd77169d9d68d02a0f2f 202 SUPERFAMILY SSF50022 31 197 2.36E-36 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC12D_RS14300 8efa6d8f6e38fd77169d9d68d02a0f2f 202 PANTHER PTHR10134 1 199 2.3E-67 T 22-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 RPIC12D_RS10300 b0e99e285b58885e5db230965c954ca8 334 PANTHER PTHR21064 9 300 4.3E-38 T 22-04-2016 RPIC12D_RS10300 b0e99e285b58885e5db230965c954ca8 334 Pfam PF01636 Phosphotransferase enzyme family 28 267 3.4E-33 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase RPIC12D_RS10300 b0e99e285b58885e5db230965c954ca8 334 Gene3D G3DSA:3.30.200.20 1 107 6.3E-39 T 22-04-2016 RPIC12D_RS10300 b0e99e285b58885e5db230965c954ca8 334 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 317 2.3E-94 T 22-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 RPIC12D_RS10300 b0e99e285b58885e5db230965c954ca8 334 Hamap MF_00301 Homoserine kinase [thrB]. 1 334 162.087 T 22-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 RPIC12D_RS10300 b0e99e285b58885e5db230965c954ca8 334 Gene3D G3DSA:3.90.1200.10 110 319 1.6E-61 T 22-04-2016 RPIC12D_RS10300 b0e99e285b58885e5db230965c954ca8 334 SUPERFAMILY SSF56112 5 319 6.27E-68 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC12D_RS00805 e8a53de278548f132bb5dff3da20a120 302 PANTHER PTHR30136 7 287 1.0E-67 T 22-04-2016 RPIC12D_RS00805 e8a53de278548f132bb5dff3da20a120 302 Pfam PF09339 IclR helix-turn-helix domain 32 83 7.3E-16 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC12D_RS00805 e8a53de278548f132bb5dff3da20a120 302 SMART SM00346 30 120 7.5E-20 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC12D_RS00805 e8a53de278548f132bb5dff3da20a120 302 PANTHER PTHR30136:SF8 7 287 1.0E-67 T 22-04-2016 RPIC12D_RS00805 e8a53de278548f132bb5dff3da20a120 302 Gene3D G3DSA:1.10.10.10 29 103 1.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00805 e8a53de278548f132bb5dff3da20a120 302 SUPERFAMILY SSF46785 30 103 2.77E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00805 e8a53de278548f132bb5dff3da20a120 302 Pfam PF01614 Bacterial transcriptional regulator 149 272 5.2E-10 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RPIC12D_RS00805 e8a53de278548f132bb5dff3da20a120 302 Gene3D G3DSA:3.30.450.40 106 280 1.9E-41 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS00805 e8a53de278548f132bb5dff3da20a120 302 SUPERFAMILY SSF55781 88 278 7.19E-34 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS12375 cfc1bfad1b2a88ee5e8e16a8a6ed07a2 371 SUPERFAMILY SSF53800 14 351 6.67E-108 T 22-04-2016 RPIC12D_RS12375 cfc1bfad1b2a88ee5e8e16a8a6ed07a2 371 Gene3D G3DSA:3.40.50.1400 16 224 5.2E-70 T 22-04-2016 RPIC12D_RS12375 cfc1bfad1b2a88ee5e8e16a8a6ed07a2 371 PANTHER PTHR11108 15 345 7.6E-114 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RPIC12D_RS12375 cfc1bfad1b2a88ee5e8e16a8a6ed07a2 371 TIGRFAM TIGR00109 hemH: ferrochelatase 15 344 1.6E-93 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RPIC12D_RS12375 cfc1bfad1b2a88ee5e8e16a8a6ed07a2 371 Gene3D G3DSA:3.40.50.1400 225 345 1.6E-30 T 22-04-2016 RPIC12D_RS12375 cfc1bfad1b2a88ee5e8e16a8a6ed07a2 371 Pfam PF00762 Ferrochelatase 16 343 6.4E-115 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RPIC12D_RS12375 cfc1bfad1b2a88ee5e8e16a8a6ed07a2 371 ProSitePatterns PS00534 Ferrochelatase signature. 213 231 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RPIC12D_RS12375 cfc1bfad1b2a88ee5e8e16a8a6ed07a2 371 Hamap MF_00323 Ferrochelatase [hemH]. 15 344 38.421 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 Gene3D G3DSA:2.40.40.20 813 824 5.3E-51 T 22-04-2016 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 Gene3D G3DSA:2.40.40.20 685 718 5.3E-51 T 22-04-2016 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 Gene3D G3DSA:2.40.40.20 861 999 5.3E-51 T 22-04-2016 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 Gene3D G3DSA:2.20.25.90 87 139 2.4E-15 T 22-04-2016 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 SUPERFAMILY SSF50692 832 999 1.67E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 87 136 4.7E-11 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 90 107 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 Pfam PF01568 Molydopterin dinucleotide binding domain 867 993 1.0E-18 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 44 66 0.0012 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 PANTHER PTHR11615:SF140 776 997 1.6E-292 T 22-04-2016 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 PANTHER PTHR11615:SF140 544 636 1.6E-292 T 22-04-2016 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 PANTHER PTHR11615:SF140 425 528 1.6E-292 T 22-04-2016 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 PANTHER PTHR11615:SF140 34 406 1.6E-292 T 22-04-2016 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 SMART SM00926 85 139 6.6E-13 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 Pfam PF00384 Molybdopterin oxidoreductase 142 597 1.9E-55 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 Gene3D G3DSA:3.40.50.740 142 216 7.3E-76 T 22-04-2016 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 Gene3D G3DSA:3.40.50.740 401 671 7.3E-76 T 22-04-2016 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 PANTHER PTHR11615 776 997 1.6E-292 T 22-04-2016 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 PANTHER PTHR11615 544 636 1.6E-292 T 22-04-2016 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 PANTHER PTHR11615 425 528 1.6E-292 T 22-04-2016 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 PANTHER PTHR11615 34 406 1.6E-292 T 22-04-2016 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 Gene3D G3DSA:3.40.228.10 217 400 1.9E-63 T 22-04-2016 RPIC12D_RS10970 21a03dc45584e5e91975d1fca5c726d2 1001 SUPERFAMILY SSF53706 84 646 3.53E-201 T 22-04-2016 RPIC12D_RS02910 2b5de3dbbb3b37693fcc48672e540db5 429 Gene3D G3DSA:3.90.1150.10 3 75 3.2E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS02910 2b5de3dbbb3b37693fcc48672e540db5 429 Gene3D G3DSA:3.90.1150.10 311 401 3.2E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS02910 2b5de3dbbb3b37693fcc48672e540db5 429 PANTHER PTHR11986 3 409 1.6E-103 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS02910 2b5de3dbbb3b37693fcc48672e540db5 429 PANTHER PTHR11986:SF5 3 409 1.6E-103 T 22-04-2016 RPIC12D_RS02910 2b5de3dbbb3b37693fcc48672e540db5 429 SUPERFAMILY SSF53383 5 401 1.14E-91 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS02910 2b5de3dbbb3b37693fcc48672e540db5 429 Gene3D G3DSA:3.40.640.10 76 304 8.8E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS02910 2b5de3dbbb3b37693fcc48672e540db5 429 Pfam PF00202 Aminotransferase class-III 39 326 1.8E-54 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS06760 2c77e0745adbead7b3fb5df6d223a3bc 258 Gene3D G3DSA:3.40.1180.10 11 247 1.8E-93 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RPIC12D_RS06760 2c77e0745adbead7b3fb5df6d223a3bc 258 PANTHER PTHR10291 16 253 1.4E-112 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RPIC12D_RS06760 2c77e0745adbead7b3fb5df6d223a3bc 258 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 241 39.424 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RPIC12D_RS06760 2c77e0745adbead7b3fb5df6d223a3bc 258 SUPERFAMILY SSF64005 13 236 1.31E-83 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RPIC12D_RS06760 2c77e0745adbead7b3fb5df6d223a3bc 258 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 240 2.5E-83 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RPIC12D_RS06760 2c77e0745adbead7b3fb5df6d223a3bc 258 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 240 3.9E-76 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RPIC12D_RS06760 2c77e0745adbead7b3fb5df6d223a3bc 258 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 186 203 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 RPIC12D_RS07465 c64f4ddb6f0e0c3cb8cf7cd800f24b16 693 SUPERFAMILY SSF51735 291 470 1.42E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS07465 c64f4ddb6f0e0c3cb8cf7cd800f24b16 693 SUPERFAMILY SSF48179 597 691 1.28E-23 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS07465 c64f4ddb6f0e0c3cb8cf7cd800f24b16 693 Gene3D G3DSA:3.40.50.720 288 476 2.6E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS07465 c64f4ddb6f0e0c3cb8cf7cd800f24b16 693 SUPERFAMILY SSF48179 474 616 5.1E-26 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS07465 c64f4ddb6f0e0c3cb8cf7cd800f24b16 693 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 180 3.1E-37 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC12D_RS07465 c64f4ddb6f0e0c3cb8cf7cd800f24b16 693 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 475 567 3.6E-22 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC12D_RS07465 c64f4ddb6f0e0c3cb8cf7cd800f24b16 693 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 603 689 2.1E-8 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC12D_RS07465 c64f4ddb6f0e0c3cb8cf7cd800f24b16 693 PANTHER PTHR23309:SF9 1 688 0.0 T 22-04-2016 RPIC12D_RS07465 c64f4ddb6f0e0c3cb8cf7cd800f24b16 693 Gene3D G3DSA:1.10.1040.10 477 568 5.4E-19 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC12D_RS07465 c64f4ddb6f0e0c3cb8cf7cd800f24b16 693 PANTHER PTHR23309 1 688 0.0 T 22-04-2016 RPIC12D_RS07465 c64f4ddb6f0e0c3cb8cf7cd800f24b16 693 Gene3D G3DSA:3.90.226.10 4 277 1.0E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS07465 c64f4ddb6f0e0c3cb8cf7cd800f24b16 693 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 294 470 3.0E-62 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC12D_RS07465 c64f4ddb6f0e0c3cb8cf7cd800f24b16 693 Gene3D G3DSA:1.10.1040.10 609 690 4.3E-17 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC12D_RS07465 c64f4ddb6f0e0c3cb8cf7cd800f24b16 693 SUPERFAMILY SSF52096 5 286 3.53E-60 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS01080 de469dcf42f94b3d132abd5557c378d5 524 SUPERFAMILY SSF111352 91 503 5.62E-125 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RPIC12D_RS01080 de469dcf42f94b3d132abd5557c378d5 524 PANTHER PTHR11730:SF17 261 523 8.3E-177 T 22-04-2016 RPIC12D_RS01080 de469dcf42f94b3d132abd5557c378d5 524 PANTHER PTHR11730:SF17 66 242 8.3E-177 T 22-04-2016 RPIC12D_RS01080 de469dcf42f94b3d132abd5557c378d5 524 Gene3D G3DSA:1.10.3430.10 88 503 1.6E-141 T 22-04-2016 IPR029020 Ammonium/urea transporter RPIC12D_RS01080 de469dcf42f94b3d132abd5557c378d5 524 ProSitePatterns PS01219 Ammonium transporters signature. 270 295 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 RPIC12D_RS01080 de469dcf42f94b3d132abd5557c378d5 524 PANTHER PTHR11730 261 523 8.3E-177 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RPIC12D_RS01080 de469dcf42f94b3d132abd5557c378d5 524 PANTHER PTHR11730 66 242 8.3E-177 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RPIC12D_RS01080 de469dcf42f94b3d132abd5557c378d5 524 Pfam PF00909 Ammonium Transporter Family 96 522 1.5E-121 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RPIC12D_RS01080 de469dcf42f94b3d132abd5557c378d5 524 TIGRFAM TIGR00836 amt: ammonium transporter 94 522 1.2E-133 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RPIC12D_RS07175 d760ea25f374fc171a261a9c97f3a965 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 4.7E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07175 d760ea25f374fc171a261a9c97f3a965 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.7E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07175 d760ea25f374fc171a261a9c97f3a965 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 4.7E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07175 d760ea25f374fc171a261a9c97f3a965 260 SUPERFAMILY SSF51735 8 257 2.59E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS07175 d760ea25f374fc171a261a9c97f3a965 260 Gene3D G3DSA:3.40.50.720 2 257 1.0E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS07175 d760ea25f374fc171a261a9c97f3a965 260 Pfam PF00106 short chain dehydrogenase 9 191 1.7E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07175 d760ea25f374fc171a261a9c97f3a965 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC12D_RS07175 d760ea25f374fc171a261a9c97f3a965 260 PANTHER PTHR24322:SF57 13 191 5.9E-41 T 22-04-2016 RPIC12D_RS07175 d760ea25f374fc171a261a9c97f3a965 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.2E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07175 d760ea25f374fc171a261a9c97f3a965 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.2E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07175 d760ea25f374fc171a261a9c97f3a965 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 3.2E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07175 d760ea25f374fc171a261a9c97f3a965 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.2E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07175 d760ea25f374fc171a261a9c97f3a965 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 3.2E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07175 d760ea25f374fc171a261a9c97f3a965 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.2E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07175 d760ea25f374fc171a261a9c97f3a965 260 PANTHER PTHR24322 13 191 5.9E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00505 746337100653d24df6b38445f0d84600 487 PANTHER PTHR36509 52 484 2.0E-67 T 22-04-2016 RPIC12D_RS00505 746337100653d24df6b38445f0d84600 487 Gene3D G3DSA:2.60.40.1610 103 209 2.3E-19 T 22-04-2016 IPR010679 Domain of unknown function DUF1254 RPIC12D_RS00505 746337100653d24df6b38445f0d84600 487 SUPERFAMILY SSF160935 34 484 9.94E-101 T 22-04-2016 RPIC12D_RS00505 746337100653d24df6b38445f0d84600 487 Pfam PF06863 Protein of unknown function (DUF1254) 84 212 6.1E-39 T 22-04-2016 IPR010679 Domain of unknown function DUF1254 RPIC12D_RS00505 746337100653d24df6b38445f0d84600 487 Pfam PF06742 Protein of unknown function (DUF1214) 363 471 4.6E-21 T 22-04-2016 IPR010621 Domain of unknown function DUF1214 RPIC12D_RS00505 746337100653d24df6b38445f0d84600 487 PANTHER PTHR36509:SF2 52 484 2.0E-67 T 22-04-2016 RPIC12D_RS00505 746337100653d24df6b38445f0d84600 487 Gene3D G3DSA:1.10.3360.10 210 317 1.1E-10 T 22-04-2016 IPR023289 VPA0735-like domain RPIC12D_RS00505 746337100653d24df6b38445f0d84600 487 Gene3D G3DSA:2.60.120.600 325 484 3.5E-40 T 22-04-2016 IPR010621 Domain of unknown function DUF1214 RPIC12D_RS06990 b5f98b4cf6cb4a1338a5bec96dd2a17d 405 PANTHER PTHR11360 6 403 1.6E-116 T 22-04-2016 RPIC12D_RS06990 b5f98b4cf6cb4a1338a5bec96dd2a17d 405 SUPERFAMILY SSF103473 8 391 1.83E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS06990 b5f98b4cf6cb4a1338a5bec96dd2a17d 405 Gene3D G3DSA:1.20.1250.20 209 390 3.9E-19 T 22-04-2016 RPIC12D_RS06990 b5f98b4cf6cb4a1338a5bec96dd2a17d 405 Gene3D G3DSA:1.20.1250.20 25 199 3.9E-20 T 22-04-2016 RPIC12D_RS06990 b5f98b4cf6cb4a1338a5bec96dd2a17d 405 Pfam PF07690 Major Facilitator Superfamily 35 356 7.2E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS06990 b5f98b4cf6cb4a1338a5bec96dd2a17d 405 PANTHER PTHR11360:SF115 6 403 1.6E-116 T 22-04-2016 RPIC12D_RS16985 a83d3fa488385415d66c43c982dbf58e 67 SUPERFAMILY SSF69047 1 66 4.18E-27 T 22-04-2016 IPR008462 CsbD-like RPIC12D_RS16985 a83d3fa488385415d66c43c982dbf58e 67 Gene3D G3DSA:1.10.1470.10 1 65 3.3E-31 T 22-04-2016 IPR008462 CsbD-like RPIC12D_RS16985 a83d3fa488385415d66c43c982dbf58e 67 PIRSF PIRSF039008 1 66 1.4E-30 T 22-04-2016 IPR026042 Stress response protein YjbJ RPIC12D_RS16985 a83d3fa488385415d66c43c982dbf58e 67 PANTHER PTHR34977 1 62 5.4E-17 T 22-04-2016 RPIC12D_RS16985 a83d3fa488385415d66c43c982dbf58e 67 Pfam PF05532 CsbD-like 4 55 1.7E-22 T 22-04-2016 IPR008462 CsbD-like RPIC12D_RS13690 c8693de71a746b779d9f5d3cb4602834 205 Pfam PF03006 Haemolysin-III related 4 197 5.6E-40 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 RPIC12D_RS13690 c8693de71a746b779d9f5d3cb4602834 205 PANTHER PTHR20855:SF3 5 204 6.9E-55 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 RPIC12D_RS13690 c8693de71a746b779d9f5d3cb4602834 205 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 5 204 2.2E-62 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 RPIC12D_RS13690 c8693de71a746b779d9f5d3cb4602834 205 PANTHER PTHR20855 5 204 6.9E-55 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 RPIC12D_RS09975 cb102b0564bbcdd2e2958bda78b82b77 306 PANTHER PTHR32196 8 304 1.6E-102 T 22-04-2016 RPIC12D_RS09975 cb102b0564bbcdd2e2958bda78b82b77 306 PANTHER PTHR32196:SF33 8 304 1.6E-102 T 22-04-2016 RPIC12D_RS09975 cb102b0564bbcdd2e2958bda78b82b77 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 279 2.0E-33 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS12125 89b85346e323a7bce0dec4a694661e5e 342 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 219 342 1.8E-33 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS12125 89b85346e323a7bce0dec4a694661e5e 342 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 10 338 1.8E-65 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS12125 89b85346e323a7bce0dec4a694661e5e 342 Gene3D G3DSA:3.90.78.10 243 342 8.5E-40 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS12125 89b85346e323a7bce0dec4a694661e5e 342 PANTHER PTHR21071:SF6 4 342 7.0E-144 T 22-04-2016 RPIC12D_RS12125 89b85346e323a7bce0dec4a694661e5e 342 SUPERFAMILY SSF56176 8 199 3.46E-45 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS12125 89b85346e323a7bce0dec4a694661e5e 342 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 342 83.723 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS12125 89b85346e323a7bce0dec4a694661e5e 342 Pfam PF01565 FAD binding domain 24 158 1.4E-19 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIC12D_RS12125 89b85346e323a7bce0dec4a694661e5e 342 PANTHER PTHR21071 4 342 7.0E-144 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS12125 89b85346e323a7bce0dec4a694661e5e 342 SUPERFAMILY SSF56194 215 342 2.88E-44 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS12125 89b85346e323a7bce0dec4a694661e5e 342 Gene3D G3DSA:3.30.465.10 87 242 1.4E-54 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC12D_RS12125 89b85346e323a7bce0dec4a694661e5e 342 Gene3D G3DSA:3.30.43.10 8 71 2.0E-22 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RPIC12D_RS00855 e58c186666f361259c71dbd491bf5e0a 293 SUPERFAMILY SSF53067 151 282 6.48E-28 T 22-04-2016 RPIC12D_RS00855 e58c186666f361259c71dbd491bf5e0a 293 Hamap MF_01274 Type III pantothenate kinase [coaX]. 16 286 20.05 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RPIC12D_RS00855 e58c186666f361259c71dbd491bf5e0a 293 PANTHER PTHR34265 1 287 1.8E-39 T 22-04-2016 RPIC12D_RS00855 e58c186666f361259c71dbd491bf5e0a 293 Pfam PF03309 Type III pantothenate kinase 17 236 2.7E-59 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RPIC12D_RS00855 e58c186666f361259c71dbd491bf5e0a 293 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 17 282 5.3E-24 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RPIC12D_RS00855 e58c186666f361259c71dbd491bf5e0a 293 Gene3D G3DSA:3.30.420.40 120 286 4.1E-41 T 22-04-2016 RPIC12D_RS00855 e58c186666f361259c71dbd491bf5e0a 293 SUPERFAMILY SSF53067 17 147 4.86E-22 T 22-04-2016 RPIC12D_RS05075 a73f4079b3e079fa7cadda6b902c83f7 430 PANTHER PTHR11662:SF285 4 418 6.4E-191 T 22-04-2016 RPIC12D_RS05075 a73f4079b3e079fa7cadda6b902c83f7 430 Pfam PF07690 Major Facilitator Superfamily 15 373 8.0E-56 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS05075 a73f4079b3e079fa7cadda6b902c83f7 430 Gene3D G3DSA:1.20.1250.20 7 199 1.9E-47 T 22-04-2016 RPIC12D_RS05075 a73f4079b3e079fa7cadda6b902c83f7 430 SUPERFAMILY SSF103473 4 415 5.62E-81 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS05075 a73f4079b3e079fa7cadda6b902c83f7 430 PIRSF PIRSF002808 1 427 4.3E-40 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS05075 a73f4079b3e079fa7cadda6b902c83f7 430 Gene3D G3DSA:1.20.1250.20 216 418 2.7E-26 T 22-04-2016 RPIC12D_RS05075 a73f4079b3e079fa7cadda6b902c83f7 430 PANTHER PTHR11662 4 418 6.4E-191 T 22-04-2016 RPIC12D_RS07690 2b93d2264408b038d727789f18ea8b40 646 PANTHER PTHR10657 244 529 5.6E-81 T 22-04-2016 RPIC12D_RS07690 2b93d2264408b038d727789f18ea8b40 646 PANTHER PTHR10657 1 172 5.6E-81 T 22-04-2016 RPIC12D_RS07690 2b93d2264408b038d727789f18ea8b40 646 Pfam PF13624 SurA N-terminal domain 1 166 2.2E-43 T 22-04-2016 RPIC12D_RS07690 2b93d2264408b038d727789f18ea8b40 646 Pfam PF13616 PPIC-type PPIASE domain 268 374 1.6E-30 T 22-04-2016 RPIC12D_RS07690 2b93d2264408b038d727789f18ea8b40 646 SUPERFAMILY SSF109998 204 243 2.86E-26 T 22-04-2016 IPR027304 Trigger factor/SurA domain RPIC12D_RS07690 2b93d2264408b038d727789f18ea8b40 646 SUPERFAMILY SSF109998 41 170 2.86E-26 T 22-04-2016 IPR027304 Trigger factor/SurA domain RPIC12D_RS07690 2b93d2264408b038d727789f18ea8b40 646 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 311 332 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RPIC12D_RS07690 2b93d2264408b038d727789f18ea8b40 646 PANTHER PTHR10657:SF11 244 529 5.6E-81 T 22-04-2016 RPIC12D_RS07690 2b93d2264408b038d727789f18ea8b40 646 PANTHER PTHR10657:SF11 1 172 5.6E-81 T 22-04-2016 RPIC12D_RS07690 2b93d2264408b038d727789f18ea8b40 646 Gene3D G3DSA:3.10.50.40 262 396 2.0E-45 T 22-04-2016 RPIC12D_RS07690 2b93d2264408b038d727789f18ea8b40 646 SUPERFAMILY SSF54534 262 373 2.68E-33 T 22-04-2016 RPIC12D_RS03020 c53267d81c4973a45e8777f28d310d7f 255 SUPERFAMILY SSF48498 99 220 9.2E-23 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC12D_RS03020 c53267d81c4973a45e8777f28d310d7f 255 PANTHER PTHR30055 15 252 4.9E-34 T 22-04-2016 RPIC12D_RS03020 c53267d81c4973a45e8777f28d310d7f 255 Pfam PF00440 Bacterial regulatory proteins, tetR family 32 78 2.1E-18 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS03020 c53267d81c4973a45e8777f28d310d7f 255 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 45 1.0E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS03020 c53267d81c4973a45e8777f28d310d7f 255 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 53 76 1.0E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS03020 c53267d81c4973a45e8777f28d310d7f 255 SUPERFAMILY SSF46689 19 100 3.69E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS03020 c53267d81c4973a45e8777f28d310d7f 255 Pfam PF16859 Bacterial transcriptional repressor C-terminal 105 189 1.6E-9 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC12D_RS03020 c53267d81c4973a45e8777f28d310d7f 255 Gene3D G3DSA:1.10.357.10 19 233 7.6E-47 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC12D_RS01440 456461651b5d0f12efdaf1530d452de6 117 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 103 6.0E-29 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RPIC12D_RS01440 456461651b5d0f12efdaf1530d452de6 117 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 97 1.1E-25 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RPIC12D_RS01440 456461651b5d0f12efdaf1530d452de6 117 Gene3D G3DSA:3.30.160.100 1 100 2.8E-33 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RPIC12D_RS01440 456461651b5d0f12efdaf1530d452de6 117 SUPERFAMILY SSF69754 1 107 5.49E-33 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RPIC12D_RS01440 456461651b5d0f12efdaf1530d452de6 117 PANTHER PTHR33231 1 103 5.0E-31 T 22-04-2016 RPIC12D_RS14675 5057eb90256253ab47ca621bb1228a7c 172 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 16 169 3.2E-64 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS14675 5057eb90256253ab47ca621bb1228a7c 172 SUPERFAMILY SSF54211 85 165 1.24E-26 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS14675 5057eb90256253ab47ca621bb1228a7c 172 ProSitePatterns PS00585 Ribosomal protein S5 signature. 34 66 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site RPIC12D_RS14675 5057eb90256253ab47ca621bb1228a7c 172 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 169 34.336 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS14675 5057eb90256253ab47ca621bb1228a7c 172 Gene3D G3DSA:3.30.230.10 81 165 8.8E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC12D_RS14675 5057eb90256253ab47ca621bb1228a7c 172 PANTHER PTHR13718 15 170 3.1E-68 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14675 5057eb90256253ab47ca621bb1228a7c 172 Pfam PF00333 Ribosomal protein S5, N-terminal domain 17 81 5.3E-25 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14675 5057eb90256253ab47ca621bb1228a7c 172 Gene3D G3DSA:3.30.160.20 15 79 2.1E-25 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RPIC12D_RS14675 5057eb90256253ab47ca621bb1228a7c 172 Pfam PF03719 Ribosomal protein S5, C-terminal domain 93 163 3.9E-30 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14675 5057eb90256253ab47ca621bb1228a7c 172 SUPERFAMILY SSF54768 13 82 2.93E-21 T 22-04-2016 RPIC12D_RS03365 1df526eeb3ed75bbb3f9e3982b1f1d2a 128 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 29 116 1.0E-33 T 22-04-2016 IPR019110 Uncharacterised protein family, RAQPRD RPIC12D_RS03365 1df526eeb3ed75bbb3f9e3982b1f1d2a 128 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 40 114 2.6E-28 T 22-04-2016 IPR019110 Uncharacterised protein family, RAQPRD RPIC12D_RS16200 28650a4e5e0aa26c9af0e7b25e6b116e 92 Gene3D G3DSA:4.10.520.10 1 91 9.4E-34 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC12D_RS16200 28650a4e5e0aa26c9af0e7b25e6b116e 92 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 8.515098E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS16200 28650a4e5e0aa26c9af0e7b25e6b116e 92 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 8.515098E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS16200 28650a4e5e0aa26c9af0e7b25e6b116e 92 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 8.515098E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS16200 28650a4e5e0aa26c9af0e7b25e6b116e 92 SMART SM00411 1 91 2.5E-34 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS16200 28650a4e5e0aa26c9af0e7b25e6b116e 92 Pfam PF00216 Bacterial DNA-binding protein 1 91 2.4E-29 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS16200 28650a4e5e0aa26c9af0e7b25e6b116e 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RPIC12D_RS16200 28650a4e5e0aa26c9af0e7b25e6b116e 92 SUPERFAMILY SSF47729 1 91 1.09E-28 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC12D_RS16200 28650a4e5e0aa26c9af0e7b25e6b116e 92 PANTHER PTHR33175 1 91 5.0E-37 T 22-04-2016 RPIC12D_RS02180 5ac8dcd93f6122da30eaced77e01d25f 298 PIRSF PIRSF006232 11 298 1.6E-102 T 22-04-2016 IPR012093 Pirin RPIC12D_RS02180 5ac8dcd93f6122da30eaced77e01d25f 298 Pfam PF02678 Pirin 30 130 6.8E-36 T 22-04-2016 IPR003829 Pirin, N-terminal domain RPIC12D_RS02180 5ac8dcd93f6122da30eaced77e01d25f 298 PANTHER PTHR13903 8 297 4.7E-133 T 22-04-2016 IPR012093 Pirin RPIC12D_RS02180 5ac8dcd93f6122da30eaced77e01d25f 298 Gene3D G3DSA:2.60.120.10 13 271 7.0E-87 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS02180 5ac8dcd93f6122da30eaced77e01d25f 298 SUPERFAMILY SSF51182 13 297 1.08E-89 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS02180 5ac8dcd93f6122da30eaced77e01d25f 298 PANTHER PTHR13903:SF8 8 297 4.7E-133 T 22-04-2016 RPIC12D_RS02180 5ac8dcd93f6122da30eaced77e01d25f 298 Pfam PF05726 Pirin C-terminal cupin domain 185 298 2.1E-33 T 22-04-2016 IPR008778 Pirin, C-terminal domain RPIC12D_RS06440 38825c0fedd14a3fc5cf066d3bf7d80b 294 Pfam PF00563 EAL domain 43 256 5.3E-16 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS06440 38825c0fedd14a3fc5cf066d3bf7d80b 294 Gene3D G3DSA:3.20.20.450 44 253 9.8E-12 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS06440 38825c0fedd14a3fc5cf066d3bf7d80b 294 SMART SM00052 31 261 0.0038 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS06440 38825c0fedd14a3fc5cf066d3bf7d80b 294 SUPERFAMILY SSF141868 44 257 2.35E-19 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS09315 bfc2d9d02218e5eb855005e66caec6dd 342 SUPERFAMILY SSF143865 16 273 2.35E-36 T 22-04-2016 RPIC12D_RS09315 bfc2d9d02218e5eb855005e66caec6dd 342 PANTHER PTHR21535 102 339 3.1E-23 T 22-04-2016 RPIC12D_RS09315 bfc2d9d02218e5eb855005e66caec6dd 342 SUPERFAMILY SSF144083 277 338 5.1E-16 T 22-04-2016 RPIC12D_RS09315 bfc2d9d02218e5eb855005e66caec6dd 342 Pfam PF01544 CorA-like Mg2+ transporter protein 51 337 1.0E-51 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RPIC12D_RS09315 bfc2d9d02218e5eb855005e66caec6dd 342 Gene3D G3DSA:1.20.58.340 155 254 1.7E-4 T 22-04-2016 RPIC12D_RS09315 bfc2d9d02218e5eb855005e66caec6dd 342 Gene3D G3DSA:1.20.58.340 271 339 1.9E-18 T 22-04-2016 RPIC12D_RS06510 a62e66c112be893acb0aca19a2070cdb 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 76 4.4E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS06510 a62e66c112be893acb0aca19a2070cdb 233 SUPERFAMILY SSF48008 82 213 1.33E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC12D_RS06510 a62e66c112be893acb0aca19a2070cdb 233 Gene3D G3DSA:1.20.120.530 79 214 6.9E-31 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC12D_RS06510 a62e66c112be893acb0aca19a2070cdb 233 Gene3D G3DSA:1.10.10.10 4 77 7.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06510 a62e66c112be893acb0aca19a2070cdb 233 SMART SM00345 18 76 2.7E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS06510 a62e66c112be893acb0aca19a2070cdb 233 PANTHER PTHR11751 16 102 7.0E-19 T 22-04-2016 RPIC12D_RS06510 a62e66c112be893acb0aca19a2070cdb 233 Pfam PF07729 FCD domain 86 208 2.2E-20 T 22-04-2016 IPR011711 GntR, C-terminal RPIC12D_RS06510 a62e66c112be893acb0aca19a2070cdb 233 SUPERFAMILY SSF46785 8 100 8.75E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06510 a62e66c112be893acb0aca19a2070cdb 233 SMART SM00895 86 209 3.9E-19 T 22-04-2016 IPR011711 GntR, C-terminal RPIC12D_RS08635 a4b1196eb4d0702a31d43b6cce6ab41a 237 PIRSF PIRSF003107 3 224 1.8E-61 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RPIC12D_RS08635 a4b1196eb4d0702a31d43b6cce6ab41a 237 Gene3D G3DSA:1.20.58.220 5 114 4.3E-31 T 22-04-2016 RPIC12D_RS08635 a4b1196eb4d0702a31d43b6cce6ab41a 237 SUPERFAMILY SSF109755 8 227 3.56E-66 T 22-04-2016 RPIC12D_RS08635 a4b1196eb4d0702a31d43b6cce6ab41a 237 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 8 220 6.2E-69 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RPIC12D_RS08635 a4b1196eb4d0702a31d43b6cce6ab41a 237 Pfam PF01895 PhoU domain 127 210 3.5E-16 T 22-04-2016 IPR026022 PhoU domain RPIC12D_RS08635 a4b1196eb4d0702a31d43b6cce6ab41a 237 Pfam PF01895 PhoU domain 22 109 7.8E-19 T 22-04-2016 IPR026022 PhoU domain RPIC12D_RS08635 a4b1196eb4d0702a31d43b6cce6ab41a 237 PANTHER PTHR10010 1 233 7.4E-68 T 22-04-2016 RPIC12D_RS08635 a4b1196eb4d0702a31d43b6cce6ab41a 237 Gene3D G3DSA:1.20.58.220 126 230 4.4E-31 T 22-04-2016 RPIC12D_RS08635 a4b1196eb4d0702a31d43b6cce6ab41a 237 PANTHER PTHR10010:SF14 1 233 7.4E-68 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RPIC12D_RS01510 b9b0c7ad293dd2666646adc8a5c89b2f 387 SUPERFAMILY SSF103473 9 380 9.55E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS01510 b9b0c7ad293dd2666646adc8a5c89b2f 387 PANTHER PTHR23510:SF6 5 387 1.6E-112 T 22-04-2016 RPIC12D_RS01510 b9b0c7ad293dd2666646adc8a5c89b2f 387 PANTHER PTHR23510 5 387 1.6E-112 T 22-04-2016 RPIC12D_RS01510 b9b0c7ad293dd2666646adc8a5c89b2f 387 Pfam PF07690 Major Facilitator Superfamily 15 345 3.5E-39 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS01510 b9b0c7ad293dd2666646adc8a5c89b2f 387 Gene3D G3DSA:1.20.1250.20 198 380 1.9E-20 T 22-04-2016 RPIC12D_RS01510 b9b0c7ad293dd2666646adc8a5c89b2f 387 Gene3D G3DSA:1.20.1250.20 12 189 5.8E-29 T 22-04-2016 RPIC12D_RS08220 9e55e7c278437615f85909031813401f 357 PANTHER PTHR11076:SF32 1 340 1.4E-156 T 22-04-2016 RPIC12D_RS08220 9e55e7c278437615f85909031813401f 357 SUPERFAMILY SSF56672 2 234 1.69E-93 T 22-04-2016 RPIC12D_RS08220 9e55e7c278437615f85909031813401f 357 Pfam PF00817 impB/mucB/samB family 7 154 5.5E-54 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS08220 9e55e7c278437615f85909031813401f 357 Gene3D G3DSA:3.30.1490.100 238 349 1.0E-32 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS08220 9e55e7c278437615f85909031813401f 357 Hamap MF_01113 DNA polymerase IV [dinB]. 1 348 37.399 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS08220 9e55e7c278437615f85909031813401f 357 Pfam PF11799 impB/mucB/samB family C-terminal domain 235 345 5.1E-8 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS08220 9e55e7c278437615f85909031813401f 357 Gene3D G3DSA:1.10.150.20 166 235 6.6E-26 T 22-04-2016 RPIC12D_RS08220 9e55e7c278437615f85909031813401f 357 SUPERFAMILY SSF100879 241 346 1.65E-22 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS08220 9e55e7c278437615f85909031813401f 357 Gene3D G3DSA:3.30.70.270 66 164 8.4E-35 T 22-04-2016 RPIC12D_RS08220 9e55e7c278437615f85909031813401f 357 PANTHER PTHR11076 1 340 1.4E-156 T 22-04-2016 RPIC12D_RS08690 d53b80fa12e9466fc9f3c5012ca14b27 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RPIC12D_RS08690 d53b80fa12e9466fc9f3c5012ca14b27 158 PIRSF PIRSF006092 1 158 7.4E-54 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 RPIC12D_RS08690 d53b80fa12e9466fc9f3c5012ca14b27 158 Gene3D G3DSA:3.10.50.30 81 157 8.6E-31 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RPIC12D_RS08690 d53b80fa12e9466fc9f3c5012ca14b27 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 3.9E-28 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RPIC12D_RS08690 d53b80fa12e9466fc9f3c5012ca14b27 158 Gene3D G3DSA:1.10.287.180 1 75 1.1E-33 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RPIC12D_RS08690 d53b80fa12e9466fc9f3c5012ca14b27 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 3.5E-31 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RPIC12D_RS08690 d53b80fa12e9466fc9f3c5012ca14b27 158 SUPERFAMILY SSF54534 83 157 2.75E-23 T 22-04-2016 RPIC12D_RS08690 d53b80fa12e9466fc9f3c5012ca14b27 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 2.3E-56 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 RPIC12D_RS08690 d53b80fa12e9466fc9f3c5012ca14b27 158 PANTHER PTHR30437 1 157 4.1E-63 T 22-04-2016 RPIC12D_RS08690 d53b80fa12e9466fc9f3c5012ca14b27 158 SUPERFAMILY SSF46557 3 77 1.44E-27 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RPIC12D_RS08690 d53b80fa12e9466fc9f3c5012ca14b27 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RPIC12D_RS08690 d53b80fa12e9466fc9f3c5012ca14b27 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.674 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 RPIC12D_RS15195 ee35a1c00878e55994b56135e5e4362d 732 Gene3D G3DSA:3.90.1170.50 3 116 1.5E-33 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC12D_RS15195 ee35a1c00878e55994b56135e5e4362d 732 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 18 126 2.3E-21 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC12D_RS15195 ee35a1c00878e55994b56135e5e4362d 732 PANTHER PTHR11908 555 732 4.9E-282 T 22-04-2016 RPIC12D_RS15195 ee35a1c00878e55994b56135e5e4362d 732 PANTHER PTHR11908 4 534 4.9E-282 T 22-04-2016 RPIC12D_RS15195 ee35a1c00878e55994b56135e5e4362d 732 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 151 675 1.6E-125 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS15195 ee35a1c00878e55994b56135e5e4362d 732 PANTHER PTHR11908:SF71 555 732 4.9E-282 T 22-04-2016 RPIC12D_RS15195 ee35a1c00878e55994b56135e5e4362d 732 PANTHER PTHR11908:SF71 4 534 4.9E-282 T 22-04-2016 RPIC12D_RS15195 ee35a1c00878e55994b56135e5e4362d 732 Gene3D G3DSA:3.30.365.10 169 271 6.1E-40 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS15195 ee35a1c00878e55994b56135e5e4362d 732 SUPERFAMILY SSF56003 148 731 1.44E-167 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS15195 ee35a1c00878e55994b56135e5e4362d 732 Gene3D G3DSA:3.30.365.10 117 168 8.3E-8 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS15195 ee35a1c00878e55994b56135e5e4362d 732 Gene3D G3DSA:3.30.365.10 276 302 8.3E-8 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS15195 ee35a1c00878e55994b56135e5e4362d 732 Gene3D G3DSA:3.30.365.10 602 730 5.5E-54 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS15195 ee35a1c00878e55994b56135e5e4362d 732 Gene3D G3DSA:3.30.365.10 349 438 5.5E-54 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS15195 ee35a1c00878e55994b56135e5e4362d 732 SUPERFAMILY SSF54665 3 141 2.62E-35 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC12D_RS15195 ee35a1c00878e55994b56135e5e4362d 732 SMART SM01008 18 130 8.5E-36 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC12D_RS15195 ee35a1c00878e55994b56135e5e4362d 732 Gene3D G3DSA:3.30.365.10 439 601 1.2E-31 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS00610 fcf16b7f453c554d15856ae6261edb78 674 PANTHER PTHR18866 1 674 0.0 T 22-04-2016 RPIC12D_RS00610 fcf16b7f453c554d15856ae6261edb78 674 Gene3D G3DSA:3.40.50.20 1 128 1.4E-51 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS00610 fcf16b7f453c554d15856ae6261edb78 674 Gene3D G3DSA:3.30.1490.20 129 202 3.5E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC12D_RS00610 fcf16b7f453c554d15856ae6261edb78 674 Gene3D G3DSA:2.40.50.100 599 670 1.8E-24 T 22-04-2016 RPIC12D_RS00610 fcf16b7f453c554d15856ae6261edb78 674 SUPERFAMILY SSF51246 331 461 3.3E-37 T 22-04-2016 IPR011054 Rudiment single hybrid motif RPIC12D_RS00610 fcf16b7f453c554d15856ae6261edb78 674 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS00610 fcf16b7f453c554d15856ae6261edb78 674 SUPERFAMILY SSF52440 1 113 5.25E-48 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS00610 fcf16b7f453c554d15856ae6261edb78 674 SMART SM01209 114 293 0.0034 T 22-04-2016 RPIC12D_RS00610 fcf16b7f453c554d15856ae6261edb78 674 SUPERFAMILY SSF56059 83 348 1.57E-67 T 22-04-2016 RPIC12D_RS00610 fcf16b7f453c554d15856ae6261edb78 674 Gene3D G3DSA:3.30.470.20 204 461 5.4E-102 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC12D_RS00610 fcf16b7f453c554d15856ae6261edb78 674 SUPERFAMILY SSF51230 590 670 3.53E-20 T 22-04-2016 IPR011053 Single hybrid motif RPIC12D_RS00610 fcf16b7f453c554d15856ae6261edb78 674 Pfam PF02785 Biotin carboxylase C-terminal domain 336 455 7.3E-34 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC12D_RS00610 fcf16b7f453c554d15856ae6261edb78 674 Pfam PF00364 Biotin-requiring enzyme 604 667 1.4E-16 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RPIC12D_RS00610 fcf16b7f453c554d15856ae6261edb78 674 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 5.6E-76 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS00610 fcf16b7f453c554d15856ae6261edb78 674 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS00610 fcf16b7f453c554d15856ae6261edb78 674 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.3E-44 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RPIC12D_RS00610 fcf16b7f453c554d15856ae6261edb78 674 PANTHER PTHR18866:SF102 1 674 0.0 T 22-04-2016 RPIC12D_RS00610 fcf16b7f453c554d15856ae6261edb78 674 SMART SM00878 336 455 1.8E-55 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC12D_RS05390 ad1f926a5c7c95afc5c192b51ced9574 129 Pfam PF04134 Protein of unknown function, DUF393 3 112 1.1E-33 T 22-04-2016 IPR007263 Protein of unknown function DUF393 RPIC12D_RS05390 ad1f926a5c7c95afc5c192b51ced9574 129 PANTHER PTHR33639 2 129 5.6E-49 T 22-04-2016 RPIC12D_RS07235 706155f46569f2c5c45789591dca6b49 401 SUPERFAMILY SSF89796 8 401 2.62E-132 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS07235 706155f46569f2c5c45789591dca6b49 401 Pfam PF02515 CoA-transferase family III 10 378 7.4E-124 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RPIC12D_RS07235 706155f46569f2c5c45789591dca6b49 401 Gene3D G3DSA:3.40.50.10540 311 401 1.1E-106 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS07235 706155f46569f2c5c45789591dca6b49 401 Gene3D G3DSA:3.40.50.10540 6 221 1.1E-106 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS07235 706155f46569f2c5c45789591dca6b49 401 PANTHER PTHR24023:SF593 86 388 2.2E-35 T 22-04-2016 RPIC12D_RS07235 706155f46569f2c5c45789591dca6b49 401 Gene3D G3DSA:3.30.1540.10 227 310 3.2E-27 T 22-04-2016 RPIC12D_RS07235 706155f46569f2c5c45789591dca6b49 401 PANTHER PTHR24023 86 388 2.2E-35 T 22-04-2016 RPIC12D_RS15415 3e8bb65b99200aad36b25aa987391a0f 306 PANTHER PTHR22939 29 209 3.1E-34 T 22-04-2016 RPIC12D_RS15415 3e8bb65b99200aad36b25aa987391a0f 306 PRINTS PR00834 HtrA/DegQ protease family signature 155 172 2.1E-19 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS15415 3e8bb65b99200aad36b25aa987391a0f 306 PRINTS PR00834 HtrA/DegQ protease family signature 123 147 2.1E-19 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS15415 3e8bb65b99200aad36b25aa987391a0f 306 PRINTS PR00834 HtrA/DegQ protease family signature 177 194 2.1E-19 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS15415 3e8bb65b99200aad36b25aa987391a0f 306 PRINTS PR00834 HtrA/DegQ protease family signature 63 75 2.1E-19 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS15415 3e8bb65b99200aad36b25aa987391a0f 306 PRINTS PR00834 HtrA/DegQ protease family signature 83 103 2.1E-19 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS15415 3e8bb65b99200aad36b25aa987391a0f 306 SUPERFAMILY SSF50494 1 209 8.06E-37 T 22-04-2016 IPR009003 Peptidase S1, PA clan RPIC12D_RS15415 3e8bb65b99200aad36b25aa987391a0f 306 Gene3D G3DSA:2.40.10.10 125 210 2.5E-23 T 22-04-2016 RPIC12D_RS15415 3e8bb65b99200aad36b25aa987391a0f 306 Gene3D G3DSA:2.40.10.10 51 124 3.1E-10 T 22-04-2016 RPIC12D_RS15415 3e8bb65b99200aad36b25aa987391a0f 306 Pfam PF13365 Trypsin-like peptidase domain 55 184 3.4E-25 T 22-04-2016 RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 Pfam PF00672 HAMP domain 214 278 1.2E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 531 2.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 512 2.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 489 2.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 475 2.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 Gene3D G3DSA:3.30.565.10 363 533 2.1E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 PANTHER PTHR24423 1 7 3.4E-61 T 22-04-2016 RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 PANTHER PTHR24423 225 279 3.4E-61 T 22-04-2016 RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 PANTHER PTHR24423 304 532 3.4E-61 T 22-04-2016 RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 SUPERFAMILY SSF55874 382 532 4.71E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 SMART SM00304 231 284 6.2E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 Gene3D G3DSA:1.10.287.130 301 362 2.2E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 Pfam PF12729 Four helix bundle sensory module for signal transduction 27 200 9.9E-21 T 22-04-2016 IPR024478 4HB MCP domain RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 Pfam PF00512 His Kinase A (phospho-acceptor) domain 310 372 4.0E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 SUPERFAMILY SSF47384 294 372 3.34E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 SMART SM00388 309 377 2.3E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 SMART SM00387 424 534 2.1E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 SUPERFAMILY SSF158472 232 280 7.19E-9 T 22-04-2016 RPIC12D_RS12660 b0e6a37c228caab63710be47da0a7434 535 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 532 6.7E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS04115 93395a16a8d223a61559301e471748e9 193 PANTHER PTHR22769 5 147 3.9E-22 T 22-04-2016 RPIC12D_RS04115 93395a16a8d223a61559301e471748e9 193 SUPERFAMILY SSF55811 6 157 7.31E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS04115 93395a16a8d223a61559301e471748e9 193 Gene3D G3DSA:3.90.79.10 31 144 2.2E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS04115 93395a16a8d223a61559301e471748e9 193 Pfam PF00293 NUDIX domain 48 143 6.3E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC12D_RS04115 93395a16a8d223a61559301e471748e9 193 ProSitePatterns PS00893 Nudix box signature. 73 94 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RPIC12D_RS16485 0c588732e3a9299d5ce17eaef0500a84 485 PANTHER PTHR11751 101 482 1.2E-129 T 22-04-2016 RPIC12D_RS16485 0c588732e3a9299d5ce17eaef0500a84 485 Pfam PF00155 Aminotransferase class I and II 147 424 1.0E-20 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC12D_RS16485 0c588732e3a9299d5ce17eaef0500a84 485 PANTHER PTHR11751:SF287 101 482 1.2E-129 T 22-04-2016 RPIC12D_RS16485 0c588732e3a9299d5ce17eaef0500a84 485 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 4.2E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS16485 0c588732e3a9299d5ce17eaef0500a84 485 Gene3D G3DSA:3.40.640.10 159 371 1.0E-64 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS16485 0c588732e3a9299d5ce17eaef0500a84 485 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 3.7E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS16485 0c588732e3a9299d5ce17eaef0500a84 485 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 3.7E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS16485 0c588732e3a9299d5ce17eaef0500a84 485 SMART SM00345 17 76 4.7E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS16485 0c588732e3a9299d5ce17eaef0500a84 485 SUPERFAMILY SSF53383 112 482 4.4E-92 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS16485 0c588732e3a9299d5ce17eaef0500a84 485 Gene3D G3DSA:1.10.10.10 10 80 1.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16485 0c588732e3a9299d5ce17eaef0500a84 485 SUPERFAMILY SSF46785 8 80 9.4E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12325 d5a88978876cd994600d73779f276376 232 SUPERFAMILY SSF52540 6 206 9.89E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12325 d5a88978876cd994600d73779f276376 232 SMART SM00382 33 219 2.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS12325 d5a88978876cd994600d73779f276376 232 PANTHER PTHR24220 10 205 6.5E-48 T 22-04-2016 RPIC12D_RS12325 d5a88978876cd994600d73779f276376 232 Gene3D G3DSA:3.40.50.300 4 205 7.2E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12325 d5a88978876cd994600d73779f276376 232 Pfam PF00005 ABC transporter 29 171 6.5E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS09555 362fe59783376f0e61d0f95e9cc1c149 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 1.0E-24 T 22-04-2016 RPIC12D_RS09555 362fe59783376f0e61d0f95e9cc1c149 89 Pfam PF00312 Ribosomal protein S15 8 88 1.1E-37 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS09555 362fe59783376f0e61d0f95e9cc1c149 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 2.3E-38 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS09555 362fe59783376f0e61d0f95e9cc1c149 89 SMART SM01387 8 88 2.5E-52 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS09555 362fe59783376f0e61d0f95e9cc1c149 89 SUPERFAMILY SSF47060 4 89 5.59E-35 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 RPIC12D_RS09555 362fe59783376f0e61d0f95e9cc1c149 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.848 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS09555 362fe59783376f0e61d0f95e9cc1c149 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS09555 362fe59783376f0e61d0f95e9cc1c149 89 PANTHER PTHR23321 6 88 6.3E-42 T 22-04-2016 RPIC12D_RS09555 362fe59783376f0e61d0f95e9cc1c149 89 Gene3D G3DSA:1.10.287.10 5 89 2.1E-38 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 RPIC12D_RS14295 0bd6a6e8229b1fa9c74812bc5665d6e1 467 SUPERFAMILY SSF81342 15 294 3.77E-95 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RPIC12D_RS14295 0bd6a6e8229b1fa9c74812bc5665d6e1 467 PANTHER PTHR19271 367 462 9.6E-216 T 22-04-2016 RPIC12D_RS14295 0bd6a6e8229b1fa9c74812bc5665d6e1 467 PANTHER PTHR19271 9 320 9.6E-216 T 22-04-2016 RPIC12D_RS14295 0bd6a6e8229b1fa9c74812bc5665d6e1 467 PIRSF PIRSF038885 4 466 5.7E-150 T 22-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 RPIC12D_RS14295 0bd6a6e8229b1fa9c74812bc5665d6e1 467 Pfam PF00033 Cytochrome b/b6/petB 31 226 2.6E-63 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RPIC12D_RS14295 0bd6a6e8229b1fa9c74812bc5665d6e1 467 Gene3D G3DSA:1.20.810.10 14 321 2.1E-157 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain RPIC12D_RS14295 0bd6a6e8229b1fa9c74812bc5665d6e1 467 Gene3D G3DSA:1.20.810.10 368 458 2.1E-157 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain RPIC12D_RS14295 0bd6a6e8229b1fa9c74812bc5665d6e1 467 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 292 440 1.4E-41 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 RPIC12D_RS14295 0bd6a6e8229b1fa9c74812bc5665d6e1 467 PANTHER PTHR19271:SF9 367 462 9.6E-216 T 22-04-2016 RPIC12D_RS14295 0bd6a6e8229b1fa9c74812bc5665d6e1 467 PANTHER PTHR19271:SF9 9 320 9.6E-216 T 22-04-2016 RPIC12D_RS14295 0bd6a6e8229b1fa9c74812bc5665d6e1 467 SUPERFAMILY SSF81648 296 317 1.31E-22 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 RPIC12D_RS14295 0bd6a6e8229b1fa9c74812bc5665d6e1 467 SUPERFAMILY SSF81648 364 453 1.31E-22 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 RPIC12D_RS00230 728cf6c2c47f83792546d051588e9e91 272 PANTHER PTHR24322:SF211 173 203 1.1E-35 T 22-04-2016 RPIC12D_RS00230 728cf6c2c47f83792546d051588e9e91 272 PANTHER PTHR24322:SF211 25 157 1.1E-35 T 22-04-2016 RPIC12D_RS00230 728cf6c2c47f83792546d051588e9e91 272 PANTHER PTHR24322 173 203 1.1E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00230 728cf6c2c47f83792546d051588e9e91 272 PANTHER PTHR24322 25 157 1.1E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00230 728cf6c2c47f83792546d051588e9e91 272 Gene3D G3DSA:3.40.50.720 21 260 6.5E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS00230 728cf6c2c47f83792546d051588e9e91 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 22 39 3.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00230 728cf6c2c47f83792546d051588e9e91 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 3.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00230 728cf6c2c47f83792546d051588e9e91 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 97 108 3.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00230 728cf6c2c47f83792546d051588e9e91 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 3.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00230 728cf6c2c47f83792546d051588e9e91 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 192 3.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00230 728cf6c2c47f83792546d051588e9e91 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 27 259 1.1E-31 T 22-04-2016 RPIC12D_RS00230 728cf6c2c47f83792546d051588e9e91 272 SUPERFAMILY SSF51735 20 261 5.48E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 PANTHER PTHR23115:SF151 1 400 4.5E-260 T 22-04-2016 RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 402 2.0E-225 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 5.8E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 SUPERFAMILY SSF50447 207 309 2.02E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 Gene3D G3DSA:2.40.30.10 308 401 1.9E-46 T 22-04-2016 RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 402 60.295 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 Pfam PF03143 Elongation factor Tu C-terminal domain 306 400 2.0E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 Pfam PF03144 Elongation factor Tu domain 2 227 301 7.6E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 Gene3D G3DSA:3.40.50.300 4 213 1.0E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 PRINTS PR00315 GTP-binding elongation factor signature 78 88 8.1E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 PRINTS PR00315 GTP-binding elongation factor signature 14 27 8.1E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 PRINTS PR00315 GTP-binding elongation factor signature 58 66 8.1E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 PRINTS PR00315 GTP-binding elongation factor signature 94 105 8.1E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 PRINTS PR00315 GTP-binding elongation factor signature 131 140 8.1E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 SUPERFAMILY SSF52540 6 221 7.71E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 SUPERFAMILY SSF50465 310 402 4.03E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.2E-58 T 22-04-2016 RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 Gene3D G3DSA:2.40.30.10 214 306 2.1E-35 T 22-04-2016 RPIC12D_RS14770 443586a1dd987e413b58b2a9b107abc0 402 PANTHER PTHR23115 1 400 4.5E-260 T 22-04-2016 RPIC12D_RS08255 365d8759efe5fe0b9c4338e8365f549c 138 Gene3D G3DSA:4.10.520.10 37 128 1.9E-35 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC12D_RS08255 365d8759efe5fe0b9c4338e8365f549c 138 PANTHER PTHR33175:SF2 38 132 1.1E-48 T 22-04-2016 RPIC12D_RS08255 365d8759efe5fe0b9c4338e8365f549c 138 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 36 132 29.881 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 RPIC12D_RS08255 365d8759efe5fe0b9c4338e8365f549c 138 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 83 102 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RPIC12D_RS08255 365d8759efe5fe0b9c4338e8365f549c 138 PANTHER PTHR33175 38 132 1.1E-48 T 22-04-2016 RPIC12D_RS08255 365d8759efe5fe0b9c4338e8365f549c 138 SMART SM00411 38 127 5.3E-41 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS08255 365d8759efe5fe0b9c4338e8365f549c 138 PRINTS PR01727 Prokaryotic integration host factor signature 77 92 6.2E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS08255 365d8759efe5fe0b9c4338e8365f549c 138 PRINTS PR01727 Prokaryotic integration host factor signature 95 108 6.2E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS08255 365d8759efe5fe0b9c4338e8365f549c 138 PRINTS PR01727 Prokaryotic integration host factor signature 111 125 6.2E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS08255 365d8759efe5fe0b9c4338e8365f549c 138 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 37 129 2.5E-43 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 RPIC12D_RS08255 365d8759efe5fe0b9c4338e8365f549c 138 Pfam PF00216 Bacterial DNA-binding protein 38 126 1.5E-29 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS08255 365d8759efe5fe0b9c4338e8365f549c 138 SUPERFAMILY SSF47729 38 127 3.24E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC12D_RS14645 3d0028d7dac6822876d9deb3aa5a8041 121 SUPERFAMILY SSF46946 2 114 4.88E-46 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RPIC12D_RS14645 3d0028d7dac6822876d9deb3aa5a8041 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 8.1E-30 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14645 3d0028d7dac6822876d9deb3aa5a8041 121 PIRSF PIRSF002134 1 121 5.2E-41 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14645 3d0028d7dac6822876d9deb3aa5a8041 121 Gene3D G3DSA:1.10.8.50 1 71 2.0E-29 T 22-04-2016 RPIC12D_RS14645 3d0028d7dac6822876d9deb3aa5a8041 121 Gene3D G3DSA:4.10.910.10 73 120 4.0E-25 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal RPIC12D_RS14645 3d0028d7dac6822876d9deb3aa5a8041 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.191 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14645 3d0028d7dac6822876d9deb3aa5a8041 121 PANTHER PTHR10871 1 115 1.9E-63 T 22-04-2016 RPIC12D_RS14645 3d0028d7dac6822876d9deb3aa5a8041 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.0E-53 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14645 3d0028d7dac6822876d9deb3aa5a8041 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS03105 94b8fa479733960d03499c16b4ab3ac7 605 PANTHER PTHR23076 1 598 2.3E-283 T 22-04-2016 RPIC12D_RS03105 94b8fa479733960d03499c16b4ab3ac7 605 SMART SM00382 189 329 1.0E-23 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS03105 94b8fa479733960d03499c16b4ab3ac7 605 Gene3D G3DSA:1.10.8.60 336 402 3.2E-27 T 22-04-2016 RPIC12D_RS03105 94b8fa479733960d03499c16b4ab3ac7 605 Pfam PF01434 Peptidase family M41 389 598 5.0E-68 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 RPIC12D_RS03105 94b8fa479733960d03499c16b4ab3ac7 605 ProSitePatterns PS00674 AAA-protein family signature. 297 315 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 RPIC12D_RS03105 94b8fa479733960d03499c16b4ab3ac7 605 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 599 4.8E-210 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RPIC12D_RS03105 94b8fa479733960d03499c16b4ab3ac7 605 Gene3D G3DSA:3.40.50.300 149 335 8.3E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03105 94b8fa479733960d03499c16b4ab3ac7 605 Pfam PF06480 FtsH Extracellular 11 95 2.6E-6 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 RPIC12D_RS03105 94b8fa479733960d03499c16b4ab3ac7 605 Gene3D G3DSA:3.40.50.300 464 507 2.7E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03105 94b8fa479733960d03499c16b4ab3ac7 605 SUPERFAMILY SSF140990 408 601 8.5E-64 T 22-04-2016 RPIC12D_RS03105 94b8fa479733960d03499c16b4ab3ac7 605 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 193 326 2.1E-42 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS03105 94b8fa479733960d03499c16b4ab3ac7 605 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 10 604 35.632 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RPIC12D_RS03105 94b8fa479733960d03499c16b4ab3ac7 605 SUPERFAMILY SSF52540 148 398 2.05E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05500 7e79b9e3e6318386bf5a5f077f64fa63 294 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 32 274 3.0E-56 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RPIC12D_RS05500 7e79b9e3e6318386bf5a5f077f64fa63 294 Gene3D G3DSA:3.40.1280.10 24 197 1.6E-27 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIC12D_RS05500 7e79b9e3e6318386bf5a5f077f64fa63 294 SUPERFAMILY SSF75217 25 198 5.56E-30 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RPIC12D_RS05500 7e79b9e3e6318386bf5a5f077f64fa63 294 PIRSF PIRSF004808 29 283 1.8E-61 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RPIC12D_RS05500 7e79b9e3e6318386bf5a5f077f64fa63 294 PANTHER PTHR12029 36 128 3.0E-23 T 22-04-2016 RPIC12D_RS05500 7e79b9e3e6318386bf5a5f077f64fa63 294 PANTHER PTHR12029 144 197 3.0E-23 T 22-04-2016 RPIC12D_RS05500 7e79b9e3e6318386bf5a5f077f64fa63 294 Pfam PF00588 SpoU rRNA Methylase family 34 190 4.7E-29 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RPIC12D_RS15115 21eb00e9274c88986bb624bee4f4709c 540 Gene3D G3DSA:3.50.50.60 399 507 1.3E-79 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS15115 21eb00e9274c88986bb624bee4f4709c 540 Gene3D G3DSA:3.50.50.60 27 197 1.3E-79 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS15115 21eb00e9274c88986bb624bee4f4709c 540 SUPERFAMILY SSF51905 27 247 2.27E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS15115 21eb00e9274c88986bb624bee4f4709c 540 SUPERFAMILY SSF51905 314 432 2.27E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS15115 21eb00e9274c88986bb624bee4f4709c 540 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 30 228 1.2E-15 T 22-04-2016 RPIC12D_RS15115 21eb00e9274c88986bb624bee4f4709c 540 PANTHER PTHR23023 23 512 3.8E-232 T 22-04-2016 RPIC12D_RS15115 21eb00e9274c88986bb624bee4f4709c 540 PANTHER PTHR23023:SF132 23 512 3.8E-232 T 22-04-2016 RPIC12D_RS15115 21eb00e9274c88986bb624bee4f4709c 540 Gene3D G3DSA:3.50.50.60 266 267 3.1E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS15115 21eb00e9274c88986bb624bee4f4709c 540 Gene3D G3DSA:3.50.50.60 318 358 3.1E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS15115 21eb00e9274c88986bb624bee4f4709c 540 Gene3D G3DSA:3.50.50.60 198 226 3.1E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS27065 8440c09d77c0b8ebf5021c000814fabf 90 SUPERFAMILY SSF103473 2 77 1.26E-11 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS27065 8440c09d77c0b8ebf5021c000814fabf 90 Gene3D G3DSA:1.20.1250.20 2 77 1.3E-11 T 22-04-2016 RPIC12D_RS27065 8440c09d77c0b8ebf5021c000814fabf 90 PANTHER PTHR24064:SF234 1 80 1.6E-23 T 22-04-2016 RPIC12D_RS27065 8440c09d77c0b8ebf5021c000814fabf 90 Pfam PF07690 Major Facilitator Superfamily 5 73 3.1E-8 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS27065 8440c09d77c0b8ebf5021c000814fabf 90 PANTHER PTHR24064 1 80 1.6E-23 T 22-04-2016 RPIC12D_RS16245 69841d05e9b8ffd24032521c0a3b2604 410 SUPERFAMILY SSF48256 60 396 1.57E-74 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC12D_RS16245 69841d05e9b8ffd24032521c0a3b2604 410 Gene3D G3DSA:1.10.230.10 275 321 6.0E-10 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain RPIC12D_RS16245 69841d05e9b8ffd24032521c0a3b2604 410 Pfam PF12728 Helix-turn-helix domain 4 55 5.4E-9 T 22-04-2016 RPIC12D_RS16245 69841d05e9b8ffd24032521c0a3b2604 410 Gene3D G3DSA:1.10.1660.10 8 52 4.2E-4 T 22-04-2016 RPIC12D_RS16245 69841d05e9b8ffd24032521c0a3b2604 410 Pfam PF00285 Citrate synthase, C-terminal domain 71 388 2.3E-67 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC12D_RS16245 69841d05e9b8ffd24032521c0a3b2604 410 PANTHER PTHR11739:SF9 206 410 2.6E-41 T 22-04-2016 RPIC12D_RS16245 69841d05e9b8ffd24032521c0a3b2604 410 Gene3D G3DSA:1.10.580.10 74 274 1.1E-35 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 RPIC12D_RS16245 69841d05e9b8ffd24032521c0a3b2604 410 SUPERFAMILY SSF46955 4 55 1.51E-8 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC12D_RS16245 69841d05e9b8ffd24032521c0a3b2604 410 PANTHER PTHR11739 206 410 2.6E-41 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC12D_RS09320 4ce12f1894fd0fad69436efbd8b85579 314 Gene3D G3DSA:3.40.190.10 173 268 2.5E-31 T 22-04-2016 RPIC12D_RS09320 4ce12f1894fd0fad69436efbd8b85579 314 Gene3D G3DSA:3.40.190.10 90 172 8.5E-29 T 22-04-2016 RPIC12D_RS09320 4ce12f1894fd0fad69436efbd8b85579 314 Gene3D G3DSA:3.40.190.10 273 301 8.5E-29 T 22-04-2016 RPIC12D_RS09320 4ce12f1894fd0fad69436efbd8b85579 314 Gene3D G3DSA:1.10.10.10 1 86 4.6E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS09320 4ce12f1894fd0fad69436efbd8b85579 314 SUPERFAMILY SSF46785 2 85 5.78E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS09320 4ce12f1894fd0fad69436efbd8b85579 314 SUPERFAMILY SSF53850 90 295 3.58E-46 T 22-04-2016 RPIC12D_RS09320 4ce12f1894fd0fad69436efbd8b85579 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 8.7E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS09320 4ce12f1894fd0fad69436efbd8b85579 314 PANTHER PTHR30118 1 307 3.8E-109 T 22-04-2016 RPIC12D_RS09320 4ce12f1894fd0fad69436efbd8b85579 314 Pfam PF03466 LysR substrate binding domain 95 297 1.1E-26 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS09320 4ce12f1894fd0fad69436efbd8b85579 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS09320 4ce12f1894fd0fad69436efbd8b85579 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS09320 4ce12f1894fd0fad69436efbd8b85579 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS09320 4ce12f1894fd0fad69436efbd8b85579 314 PANTHER PTHR30118:SF4 1 307 3.8E-109 T 22-04-2016 RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 Gene3D G3DSA:3.30.450.20 18 124 2.7E-28 T 22-04-2016 RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 SUPERFAMILY SSF55785 139 245 2.58E-27 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 SMART SM00086 205 247 5.4E-7 T 22-04-2016 IPR001610 PAC motif RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 SMART SM00086 83 125 8.1E-9 T 22-04-2016 IPR001610 PAC motif RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 Pfam PF00990 Diguanylate cyclase, GGDEF domain 259 411 1.5E-45 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 132 254 1.6E-20 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 130 3.8E-16 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 256 414 5.3E-48 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 SMART SM00267 247 415 4.0E-54 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 SUPERFAMILY SSF55073 263 414 5.23E-46 T 22-04-2016 IPR029787 Nucleotide cyclase RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 Gene3D G3DSA:3.30.70.270 260 414 3.1E-50 T 22-04-2016 RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 SMART SM00091 7 77 0.0098 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 SMART SM00091 133 199 2.3E-7 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 Gene3D G3DSA:3.30.450.20 142 245 2.0E-26 T 22-04-2016 RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 Pfam PF13426 PAS domain 31 124 8.9E-14 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 Pfam PF00989 PAS fold 135 244 5.9E-15 T 22-04-2016 IPR013767 PAS fold GO:0006355 RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 SUPERFAMILY SSF55785 18 124 2.79E-25 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 PANTHER PTHR24423:SF382 8 264 3.3E-37 T 22-04-2016 RPIC12D_RS06185 8d2ff34f69bc090e736e7978f017077f 416 PANTHER PTHR24423 8 264 3.3E-37 T 22-04-2016 RPIC12D_RS14495 c36239b12d9cca342d228eb2f5f5410d 241 SUPERFAMILY SSF143422 3 127 1.14E-26 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS14495 c36239b12d9cca342d228eb2f5f5410d 241 SMART SM01321 9 124 9.2E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS14495 c36239b12d9cca342d228eb2f5f5410d 241 PANTHER PTHR34322 2 211 2.3E-29 T 22-04-2016 RPIC12D_RS14495 c36239b12d9cca342d228eb2f5f5410d 241 Gene3D G3DSA:3.30.70.1290 12 127 3.5E-10 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS14495 c36239b12d9cca342d228eb2f5f5410d 241 PANTHER PTHR34322:SF1 2 211 2.3E-29 T 22-04-2016 RPIC12D_RS14495 c36239b12d9cca342d228eb2f5f5410d 241 Pfam PF01797 Transposase IS200 like 13 124 2.0E-16 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS06490 ab763acebdd8c1ceb4c86efbc963993e 165 TIGRFAM TIGR01935 NOT-MenG: RraA family 6 160 2.0E-65 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 RPIC12D_RS06490 ab763acebdd8c1ceb4c86efbc963993e 165 SUPERFAMILY SSF89562 5 161 8.5E-44 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein RPIC12D_RS06490 ab763acebdd8c1ceb4c86efbc963993e 165 Pfam PF03737 Demethylmenaquinone methyltransferase 7 159 1.8E-41 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein RPIC12D_RS06490 ab763acebdd8c1ceb4c86efbc963993e 165 PANTHER PTHR33254 1 164 9.8E-72 T 22-04-2016 RPIC12D_RS06490 ab763acebdd8c1ceb4c86efbc963993e 165 Gene3D G3DSA:3.50.30.40 5 162 3.4E-48 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein RPIC12D_RS06490 ab763acebdd8c1ceb4c86efbc963993e 165 PANTHER PTHR33254:SF4 1 164 9.8E-72 T 22-04-2016 RPIC12D_RS15920 780de5d8314299fc87e31743b6466828 600 Pfam PF00672 HAMP domain 276 343 6.6E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS15920 780de5d8314299fc87e31743b6466828 600 PANTHER PTHR32089 81 599 5.7E-140 T 22-04-2016 RPIC12D_RS15920 780de5d8314299fc87e31743b6466828 600 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 370 399 3.0E-46 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS15920 780de5d8314299fc87e31743b6466828 600 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 524 553 3.0E-46 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS15920 780de5d8314299fc87e31743b6466828 600 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 476 505 3.0E-46 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS15920 780de5d8314299fc87e31743b6466828 600 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 447 474 3.0E-46 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS15920 780de5d8314299fc87e31743b6466828 600 PANTHER PTHR32089:SF63 81 599 5.7E-140 T 22-04-2016 RPIC12D_RS15920 780de5d8314299fc87e31743b6466828 600 Gene3D G3DSA:3.30.450.20 133 270 4.0E-24 T 22-04-2016 RPIC12D_RS15920 780de5d8314299fc87e31743b6466828 600 SUPERFAMILY SSF58104 316 597 3.01E-69 T 22-04-2016 RPIC12D_RS15920 780de5d8314299fc87e31743b6466828 600 SMART SM00283 349 596 7.3E-80 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS15920 780de5d8314299fc87e31743b6466828 600 SUPERFAMILY SSF103190 110 170 3.4E-8 T 22-04-2016 IPR029151 Periplasmic sensor domain-like RPIC12D_RS15920 780de5d8314299fc87e31743b6466828 600 Pfam PF02743 Cache domain 35 256 7.0E-21 T 22-04-2016 IPR033479 Double Cache domain 1 RPIC12D_RS15920 780de5d8314299fc87e31743b6466828 600 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 409 594 1.2E-56 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS15920 780de5d8314299fc87e31743b6466828 600 SMART SM00304 294 348 1.1E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS15920 780de5d8314299fc87e31743b6466828 600 Gene3D G3DSA:1.10.287.950 364 568 1.8E-55 T 22-04-2016 RPIC12D_RS08800 fc0809990aa1716416335f29e5410cba 517 Gene3D G3DSA:2.30.38.10 323 402 2.3E-16 T 22-04-2016 RPIC12D_RS08800 fc0809990aa1716416335f29e5410cba 517 PANTHER PTHR24096 2 498 6.7E-130 T 22-04-2016 RPIC12D_RS08800 fc0809990aa1716416335f29e5410cba 517 Gene3D G3DSA:3.40.50.980 6 166 2.0E-33 T 22-04-2016 RPIC12D_RS08800 fc0809990aa1716416335f29e5410cba 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 160 171 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC12D_RS08800 fc0809990aa1716416335f29e5410cba 517 Pfam PF00501 AMP-binding enzyme 10 409 5.7E-79 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC12D_RS08800 fc0809990aa1716416335f29e5410cba 517 Pfam PF13193 AMP-binding enzyme C-terminal domain 419 492 1.0E-19 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC12D_RS08800 fc0809990aa1716416335f29e5410cba 517 Gene3D G3DSA:3.40.50.980 167 317 2.6E-33 T 22-04-2016 RPIC12D_RS08800 fc0809990aa1716416335f29e5410cba 517 SUPERFAMILY SSF56801 6 500 1.83E-128 T 22-04-2016 RPIC12D_RS08800 fc0809990aa1716416335f29e5410cba 517 Gene3D G3DSA:3.30.300.30 404 500 3.1E-31 T 22-04-2016 RPIC12D_RS03560 ac1647471b4f72648bc7251289acfc9f 214 Pfam PF13633 Prokaryotic N-terminal methylation site 52 77 4.0E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS03560 ac1647471b4f72648bc7251289acfc9f 214 SUPERFAMILY SSF54523 54 142 2.43E-17 T 22-04-2016 RPIC12D_RS03560 ac1647471b4f72648bc7251289acfc9f 214 Pfam PF12019 Type II transport protein GspH 92 204 1.8E-16 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RPIC12D_RS03560 ac1647471b4f72648bc7251289acfc9f 214 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 52 74 1.2E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS03560 ac1647471b4f72648bc7251289acfc9f 214 ProSitePatterns PS00018 EF-hand calcium-binding domain. 135 147 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site RPIC12D_RS03560 ac1647471b4f72648bc7251289acfc9f 214 Gene3D G3DSA:3.30.700.10 54 86 1.4E-5 T 22-04-2016 RPIC12D_RS02360 5b416168516a93bebe492c603c0f51bf 341 PANTHER PTHR30160 2 339 2.4E-83 T 22-04-2016 RPIC12D_RS02360 5b416168516a93bebe492c603c0f51bf 341 SUPERFAMILY SSF53756 3 339 6.2E-99 T 22-04-2016 RPIC12D_RS02360 5b416168516a93bebe492c603c0f51bf 341 Gene3D G3DSA:3.40.50.2000 3 151 2.7E-51 T 22-04-2016 RPIC12D_RS02360 5b416168516a93bebe492c603c0f51bf 341 PANTHER PTHR30160:SF7 2 339 2.4E-83 T 22-04-2016 RPIC12D_RS02360 5b416168516a93bebe492c603c0f51bf 341 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 4 338 2.2E-136 T 22-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 RPIC12D_RS02360 5b416168516a93bebe492c603c0f51bf 341 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 73 318 1.9E-64 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RPIC12D_RS02360 5b416168516a93bebe492c603c0f51bf 341 Gene3D G3DSA:3.40.50.2000 166 339 1.3E-57 T 22-04-2016 RPIC12D_RS16285 5792f4f93df184357a47145ce7b65292 320 SUPERFAMILY SSF48230 50 313 3.11E-43 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase RPIC12D_RS16285 5792f4f93df184357a47145ce7b65292 320 Pfam PF05426 Alginate lyase 66 256 9.1E-40 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 RPIC12D_RS16285 5792f4f93df184357a47145ce7b65292 320 Gene3D G3DSA:1.50.10.110 23 315 8.9E-63 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 RPIC12D_RS13540 25d281b8ba1377dd8e9b5dbc0b8e278d 293 PANTHER PTHR30487 62 282 3.6E-100 T 22-04-2016 RPIC12D_RS13540 25d281b8ba1377dd8e9b5dbc0b8e278d 293 PANTHER PTHR30487 6 42 3.6E-100 T 22-04-2016 RPIC12D_RS13540 25d281b8ba1377dd8e9b5dbc0b8e278d 293 Pfam PF01478 Type IV leader peptidase family 140 248 7.7E-27 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RPIC12D_RS13540 25d281b8ba1377dd8e9b5dbc0b8e278d 293 PANTHER PTHR30487:SF0 62 282 3.6E-100 T 22-04-2016 RPIC12D_RS13540 25d281b8ba1377dd8e9b5dbc0b8e278d 293 PANTHER PTHR30487:SF0 6 42 3.6E-100 T 22-04-2016 RPIC12D_RS13540 25d281b8ba1377dd8e9b5dbc0b8e278d 293 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 148 165 6.2E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RPIC12D_RS13540 25d281b8ba1377dd8e9b5dbc0b8e278d 293 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 216 227 6.2E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RPIC12D_RS13540 25d281b8ba1377dd8e9b5dbc0b8e278d 293 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 228 243 6.2E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RPIC12D_RS13540 25d281b8ba1377dd8e9b5dbc0b8e278d 293 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 205 215 6.2E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RPIC12D_RS13540 25d281b8ba1377dd8e9b5dbc0b8e278d 293 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 24 129 1.5E-35 T 22-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RPIC12D_RS11075 ffa932d9538c095df1ea321e5496dae0 192 PANTHER PTHR23029 48 191 3.5E-17 T 22-04-2016 RPIC12D_RS11075 ffa932d9538c095df1ea321e5496dae0 192 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 174 2.0E-50 T 22-04-2016 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RPIC12D_RS11075 ffa932d9538c095df1ea321e5496dae0 192 SUPERFAMILY SSF53254 1 175 1.26E-33 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC12D_RS11075 ffa932d9538c095df1ea321e5496dae0 192 Gene3D G3DSA:3.40.50.1240 1 170 3.6E-30 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC12D_RS11075 ffa932d9538c095df1ea321e5496dae0 192 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 170 3.8E-30 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC12D_RS11075 ffa932d9538c095df1ea321e5496dae0 192 SMART SM00855 2 152 9.6E-9 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC12D_RS02615 2a3c8f7e89be11b1866dae60ca8d46fe 585 SMART SM00267 398 572 2.0E-54 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS02615 2a3c8f7e89be11b1866dae60ca8d46fe 585 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 405 570 1.4E-44 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS02615 2a3c8f7e89be11b1866dae60ca8d46fe 585 PANTHER PTHR10799 288 570 1.1E-23 T 22-04-2016 RPIC12D_RS02615 2a3c8f7e89be11b1866dae60ca8d46fe 585 Pfam PF00990 Diguanylate cyclase, GGDEF domain 409 567 5.2E-40 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS02615 2a3c8f7e89be11b1866dae60ca8d46fe 585 SUPERFAMILY SSF55073 414 570 5.49E-43 T 22-04-2016 IPR029787 Nucleotide cyclase RPIC12D_RS02615 2a3c8f7e89be11b1866dae60ca8d46fe 585 PANTHER PTHR10799:SF750 288 570 1.1E-23 T 22-04-2016 RPIC12D_RS02615 2a3c8f7e89be11b1866dae60ca8d46fe 585 Gene3D G3DSA:3.30.70.270 411 571 2.2E-49 T 22-04-2016 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 257 311 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 PANTHER PTHR10422 15 534 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 SUPERFAMILY SSF81442 26 533 1.1E-193 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 76 99 3.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 204 223 3.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 175 193 3.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 29 54 3.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 438 459 3.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 301 316 3.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 360 378 3.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 103 127 3.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 146 158 3.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 255 276 3.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 325 346 3.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 388 407 3.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 30 533 7.5E-213 T 22-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 Gene3D G3DSA:1.20.210.10 18 533 6.1E-222 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 PANTHER PTHR10422:SF27 15 534 0.0 T 22-04-2016 RPIC12D_RS01180 3b4fc2cf02a95e733e5aa48a4662aa8c 534 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 38 478 8.5E-153 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS03510 5bd23a95ffb1f98b5dfe8953555f68a9 394 PANTHER PTHR11751 11 390 4.6E-138 T 22-04-2016 RPIC12D_RS03510 5bd23a95ffb1f98b5dfe8953555f68a9 394 Gene3D G3DSA:3.90.1150.10 257 393 1.1E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS03510 5bd23a95ffb1f98b5dfe8953555f68a9 394 PANTHER PTHR11751:SF401 11 390 4.6E-138 T 22-04-2016 RPIC12D_RS03510 5bd23a95ffb1f98b5dfe8953555f68a9 394 Pfam PF00155 Aminotransferase class I and II 37 388 3.6E-56 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC12D_RS03510 5bd23a95ffb1f98b5dfe8953555f68a9 394 Gene3D G3DSA:3.40.640.10 51 256 2.5E-60 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS03510 5bd23a95ffb1f98b5dfe8953555f68a9 394 SUPERFAMILY SSF53383 9 393 6.39E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS03510 5bd23a95ffb1f98b5dfe8953555f68a9 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RPIC12D_RS13850 e6cb3a25ef6d14799c676f41e04141ca 738 Pfam PF13515 Fusaric acid resistance protein-like 403 524 1.5E-16 T 22-04-2016 RPIC12D_RS13850 e6cb3a25ef6d14799c676f41e04141ca 738 PANTHER PTHR30509:SF8 686 726 2.1E-23 T 22-04-2016 RPIC12D_RS13850 e6cb3a25ef6d14799c676f41e04141ca 738 PANTHER PTHR30509:SF8 2 621 2.1E-23 T 22-04-2016 RPIC12D_RS13850 e6cb3a25ef6d14799c676f41e04141ca 738 Pfam PF12805 FUSC-like inner membrane protein yccS 69 336 1.9E-58 T 22-04-2016 IPR032692 Integral membrane protein YccS, N-terminal RPIC12D_RS13850 e6cb3a25ef6d14799c676f41e04141ca 738 PANTHER PTHR30509 686 726 2.1E-23 T 22-04-2016 RPIC12D_RS13850 e6cb3a25ef6d14799c676f41e04141ca 738 PANTHER PTHR30509 2 621 2.1E-23 T 22-04-2016 RPIC12D_RS01120 a9fd809229d113723df20521472b4be1 249 PANTHER PTHR10953 1 246 7.3E-95 T 22-04-2016 RPIC12D_RS01120 a9fd809229d113723df20521472b4be1 249 PANTHER PTHR10953:SF158 1 246 7.3E-95 T 22-04-2016 RPIC12D_RS01120 a9fd809229d113723df20521472b4be1 249 Pfam PF00899 ThiF family 9 242 1.0E-62 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RPIC12D_RS01120 a9fd809229d113723df20521472b4be1 249 SUPERFAMILY SSF69572 2 246 1.24E-87 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RPIC12D_RS01120 a9fd809229d113723df20521472b4be1 249 Gene3D G3DSA:3.40.50.720 3 246 3.2E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS08730 b982255f9b25f0b5ab9ebf7e77c6b64d 148 Hamap MF_00042 Ribonuclease H [rnhA]. 1 148 33.826 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 RPIC12D_RS08730 b982255f9b25f0b5ab9ebf7e77c6b64d 148 SUPERFAMILY SSF53098 2 141 1.2E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS08730 b982255f9b25f0b5ab9ebf7e77c6b64d 148 PANTHER PTHR10642 4 145 3.9E-59 T 22-04-2016 RPIC12D_RS08730 b982255f9b25f0b5ab9ebf7e77c6b64d 148 Pfam PF00075 RNase H 2 140 3.3E-50 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 RPIC12D_RS08730 b982255f9b25f0b5ab9ebf7e77c6b64d 148 Gene3D G3DSA:3.30.420.10 2 143 2.0E-61 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS07805 34e605c839f884d06654f50226362f4c 439 Pfam PF07690 Major Facilitator Superfamily 39 324 1.1E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS07805 34e605c839f884d06654f50226362f4c 439 Gene3D G3DSA:1.20.1250.20 241 432 1.9E-16 T 22-04-2016 RPIC12D_RS07805 34e605c839f884d06654f50226362f4c 439 PANTHER PTHR23508:SF18 25 435 1.6E-63 T 22-04-2016 RPIC12D_RS07805 34e605c839f884d06654f50226362f4c 439 PANTHER PTHR23508 25 435 1.6E-63 T 22-04-2016 RPIC12D_RS07805 34e605c839f884d06654f50226362f4c 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 83 99 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS07805 34e605c839f884d06654f50226362f4c 439 SUPERFAMILY SSF103473 22 434 2.35E-68 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS07805 34e605c839f884d06654f50226362f4c 439 Gene3D G3DSA:1.20.1250.20 24 212 3.0E-28 T 22-04-2016 RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 Gene3D G3DSA:1.10.486.10 638 779 3.3E-10 T 22-04-2016 RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 Pfam PF00580 UvrD/REP helicase N-terminal domain 21 472 6.1E-46 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 Pfam PF13361 UvrD-like helicase C-terminal domain 813 913 2.6E-10 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 PANTHER PTHR11070 20 90 3.7E-84 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 PANTHER PTHR11070 795 858 3.7E-84 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 PANTHER PTHR11070 333 539 3.7E-84 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 PANTHER PTHR11070 890 918 3.7E-84 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 PANTHER PTHR11070 563 762 3.7E-84 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 PANTHER PTHR11070 121 210 3.7E-84 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 Gene3D G3DSA:3.40.50.300 20 77 3.8E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 Gene3D G3DSA:3.40.50.300 129 189 3.8E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 Gene3D G3DSA:3.40.50.300 368 473 3.8E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 Gene3D G3DSA:3.40.50.300 810 927 2.3E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 Gene3D G3DSA:3.40.50.300 491 625 2.3E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1008 1136 9.4E-6 T 22-04-2016 RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 SUPERFAMILY SSF52540 568 791 1.73E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 SUPERFAMILY SSF52540 891 917 1.73E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 SUPERFAMILY SSF52540 21 81 1.73E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 SUPERFAMILY SSF52540 818 842 1.73E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 SUPERFAMILY SSF52540 121 201 1.73E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05665 db2c9e159cd4e4bb38a0937f740d209b 1173 SUPERFAMILY SSF52540 358 513 1.73E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03865 ec24877b5676a134b87d8ecffeaedf17 417 Gene3D G3DSA:3.90.1150.10 258 417 1.2E-63 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS03865 ec24877b5676a134b87d8ecffeaedf17 417 PIRSF PIRSF038800 1 408 5.0E-142 T 22-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 RPIC12D_RS03865 ec24877b5676a134b87d8ecffeaedf17 417 PANTHER PTHR14084 3 410 4.1E-139 T 22-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 RPIC12D_RS03865 ec24877b5676a134b87d8ecffeaedf17 417 SUPERFAMILY SSF53383 4 401 1.03E-88 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS03865 ec24877b5676a134b87d8ecffeaedf17 417 Gene3D G3DSA:3.40.640.10 42 257 2.4E-23 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS03865 ec24877b5676a134b87d8ecffeaedf17 417 TIGRFAM TIGR01814 kynureninase: kynureninase 10 401 9.7E-117 T 22-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 RPIC12D_RS03865 ec24877b5676a134b87d8ecffeaedf17 417 Pfam PF00266 Aminotransferase class-V 31 320 8.9E-15 T 22-04-2016 IPR000192 Aminotransferase class V domain RPIC12D_RS03865 ec24877b5676a134b87d8ecffeaedf17 417 Hamap MF_01970 Kynureninase [kynU]. 2 400 34.705 T 22-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 RPIC12D_RS01155 b1f0b52f155cfec53883fef5c29a1fa2 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 153 32.755 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RPIC12D_RS01155 b1f0b52f155cfec53883fef5c29a1fa2 156 PIRSF PIRSF029256 1 156 2.1E-64 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RPIC12D_RS01155 b1f0b52f155cfec53883fef5c29a1fa2 156 Pfam PF00588 SpoU rRNA Methylase family 2 143 2.4E-32 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RPIC12D_RS01155 b1f0b52f155cfec53883fef5c29a1fa2 156 SUPERFAMILY SSF75217 1 154 2.03E-43 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RPIC12D_RS01155 b1f0b52f155cfec53883fef5c29a1fa2 156 Gene3D G3DSA:3.40.1280.10 1 155 2.3E-66 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIC12D_RS01155 b1f0b52f155cfec53883fef5c29a1fa2 156 PANTHER PTHR12029:SF31 1 154 1.8E-71 T 22-04-2016 RPIC12D_RS01155 b1f0b52f155cfec53883fef5c29a1fa2 156 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 1.3E-59 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RPIC12D_RS01155 b1f0b52f155cfec53883fef5c29a1fa2 156 PANTHER PTHR12029 1 154 1.8E-71 T 22-04-2016 RPIC12D_RS07425 fecc3062b7bef4f628250a9c0414e379 282 SUPERFAMILY SSF53639 41 265 3.14E-72 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS07425 fecc3062b7bef4f628250a9c0414e379 282 SMART SM01007 48 228 4.1E-66 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS07425 fecc3062b7bef4f628250a9c0414e379 282 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 48 228 1.8E-53 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS07425 fecc3062b7bef4f628250a9c0414e379 282 PANTHER PTHR10672 29 277 6.7E-134 T 22-04-2016 RPIC12D_RS07425 fecc3062b7bef4f628250a9c0414e379 282 Gene3D G3DSA:3.40.225.10 43 263 5.8E-71 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS07425 fecc3062b7bef4f628250a9c0414e379 282 PANTHER PTHR10672:SF17 29 277 6.7E-134 T 22-04-2016 RPIC12D_RS11670 1a3587968c773cdf2ffa58366ccf94bc 382 Pfam PF02445 Quinolinate synthetase A protein 48 354 3.9E-103 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RPIC12D_RS11670 1a3587968c773cdf2ffa58366ccf94bc 382 Hamap MF_00567 Quinolinate synthase A [nadA]. 6 361 66.678 T 22-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RPIC12D_RS11670 1a3587968c773cdf2ffa58366ccf94bc 382 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 42 355 2.1E-112 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RPIC12D_RS11670 1a3587968c773cdf2ffa58366ccf94bc 382 PANTHER PTHR30573 33 378 4.8E-149 T 22-04-2016 RPIC12D_RS11670 1a3587968c773cdf2ffa58366ccf94bc 382 SUPERFAMILY SSF142754 44 355 5.89E-108 T 22-04-2016 RPIC12D_RS13020 fba1ef7343f96f71929d6d1fea1594f4 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 324 3.3E-37 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS13020 fba1ef7343f96f71929d6d1fea1594f4 336 PANTHER PTHR32196 1 331 1.6E-96 T 22-04-2016 RPIC12D_RS13020 fba1ef7343f96f71929d6d1fea1594f4 336 PANTHER PTHR32196:SF37 1 331 1.6E-96 T 22-04-2016 RPIC12D_RS14625 881a116066c611b5763de6b37f4190be 132 Pfam PF01196 Ribosomal protein L17 20 115 2.5E-36 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14625 881a116066c611b5763de6b37f4190be 132 Gene3D G3DSA:3.90.1030.10 1 117 4.6E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14625 881a116066c611b5763de6b37f4190be 132 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.437 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14625 881a116066c611b5763de6b37f4190be 132 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14625 881a116066c611b5763de6b37f4190be 132 SUPERFAMILY SSF64263 1 119 1.31E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14625 881a116066c611b5763de6b37f4190be 132 PANTHER PTHR14413 1 119 5.4E-64 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14625 881a116066c611b5763de6b37f4190be 132 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 7.5E-47 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS10945 de27735392300e667f7eff7b5c728097 183 Gene3D G3DSA:2.60.40.200 39 180 5.0E-49 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS10945 de27735392300e667f7eff7b5c728097 183 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 169 180 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS10945 de27735392300e667f7eff7b5c728097 183 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 79 89 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS10945 de27735392300e667f7eff7b5c728097 183 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 46 180 4.4E-43 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS10945 de27735392300e667f7eff7b5c728097 183 PANTHER PTHR10003 33 180 1.3E-43 T 22-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 RPIC12D_RS10945 de27735392300e667f7eff7b5c728097 183 SUPERFAMILY SSF49329 36 180 7.85E-44 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS10945 de27735392300e667f7eff7b5c728097 183 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 136 158 1.7E-5 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS10945 de27735392300e667f7eff7b5c728097 183 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 79 101 1.7E-5 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS10945 de27735392300e667f7eff7b5c728097 183 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 116 125 1.7E-5 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 Gene3D G3DSA:3.90.700.10 248 354 1.2E-41 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 PANTHER PTHR11632:SF5 1 587 0.0 T 22-04-2016 RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 PIRSF PIRSF000171 3 579 1.1E-41 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 Gene3D G3DSA:4.10.80.40 560 592 3.8E-23 T 22-04-2016 RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 SUPERFAMILY SSF46977 456 592 2.09E-46 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 SUPERFAMILY SSF51905 363 432 2.01E-78 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 SUPERFAMILY SSF51905 9 264 2.01E-78 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 Gene3D G3DSA:1.20.58.100 450 559 1.4E-37 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 Gene3D G3DSA:3.50.50.60 355 430 1.6E-119 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 Gene3D G3DSA:3.50.50.60 10 247 1.6E-119 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 Pfam PF02910 Fumarate reductase flavoprotein C-term 466 591 2.9E-40 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 Pfam PF00890 FAD binding domain 14 409 2.3E-116 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 11 592 3.5E-281 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 14 591 1.0E-239 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 SUPERFAMILY SSF56425 241 359 5.53E-44 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 48 57 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 4.2E-6 T 22-04-2016 RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 394 4.2E-6 T 22-04-2016 RPIC12D_RS09185 490db7333bf6c4d32df5f99bad370d88 592 PANTHER PTHR11632 1 587 0.0 T 22-04-2016 RPIC12D_RS08855 e54700d4cd1976aac12e5c098d30e534 324 Gene3D G3DSA:3.40.190.10 89 174 2.0E-10 T 22-04-2016 RPIC12D_RS08855 e54700d4cd1976aac12e5c098d30e534 324 SUPERFAMILY SSF53850 88 295 5.57E-30 T 22-04-2016 RPIC12D_RS08855 e54700d4cd1976aac12e5c098d30e534 324 PANTHER PTHR30427:SF1 1 293 2.4E-81 T 22-04-2016 RPIC12D_RS08855 e54700d4cd1976aac12e5c098d30e534 324 SUPERFAMILY SSF46785 1 84 3.49E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08855 e54700d4cd1976aac12e5c098d30e534 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS08855 e54700d4cd1976aac12e5c098d30e534 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS08855 e54700d4cd1976aac12e5c098d30e534 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS08855 e54700d4cd1976aac12e5c098d30e534 324 PANTHER PTHR30427 1 293 2.4E-81 T 22-04-2016 RPIC12D_RS08855 e54700d4cd1976aac12e5c098d30e534 324 Gene3D G3DSA:1.10.10.10 1 86 3.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08855 e54700d4cd1976aac12e5c098d30e534 324 Gene3D G3DSA:3.40.190.10 175 260 1.1E-17 T 22-04-2016 RPIC12D_RS08855 e54700d4cd1976aac12e5c098d30e534 324 Pfam PF03466 LysR substrate binding domain 87 289 4.6E-29 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS08855 e54700d4cd1976aac12e5c098d30e534 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.3E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS02715 8caac2cc3918c76a2d98dbf5feb8e491 454 SMART SM00382 224 447 3.3E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS02715 8caac2cc3918c76a2d98dbf5feb8e491 454 PANTHER PTHR30258 27 447 1.2E-134 T 22-04-2016 RPIC12D_RS02715 8caac2cc3918c76a2d98dbf5feb8e491 454 Gene3D G3DSA:3.30.450.90 97 194 4.2E-35 T 22-04-2016 RPIC12D_RS02715 8caac2cc3918c76a2d98dbf5feb8e491 454 Gene3D G3DSA:3.40.50.300 197 416 2.1E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS02715 8caac2cc3918c76a2d98dbf5feb8e491 454 PANTHER PTHR30258:SF3 27 447 1.2E-134 T 22-04-2016 RPIC12D_RS02715 8caac2cc3918c76a2d98dbf5feb8e491 454 SUPERFAMILY SSF52540 81 416 1.04E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS02715 8caac2cc3918c76a2d98dbf5feb8e491 454 Pfam PF00437 Type II/IV secretion system protein 101 376 3.3E-86 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC12D_RS10015 497414830e0b49cfde309621dbc184ec 216 Gene3D G3DSA:3.40.50.2020 9 215 6.8E-74 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS10015 497414830e0b49cfde309621dbc184ec 216 Pfam PF14681 Uracil phosphoribosyltransferase 13 214 4.6E-70 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS10015 497414830e0b49cfde309621dbc184ec 216 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 12 215 1.1E-75 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 RPIC12D_RS10015 497414830e0b49cfde309621dbc184ec 216 PANTHER PTHR10285 11 204 2.9E-81 T 22-04-2016 RPIC12D_RS10015 497414830e0b49cfde309621dbc184ec 216 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 9 215 43.402 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 RPIC12D_RS10015 497414830e0b49cfde309621dbc184ec 216 SUPERFAMILY SSF53271 10 213 1.24E-61 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS04995 c0d18f9084f78c38dfa9d67f83ba6617 189 Gene3D G3DSA:2.40.50.140 65 127 1.2E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04995 c0d18f9084f78c38dfa9d67f83ba6617 189 SMART SM00841 129 187 5.4E-23 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 RPIC12D_RS04995 c0d18f9084f78c38dfa9d67f83ba6617 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 1.5E-17 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 RPIC12D_RS04995 c0d18f9084f78c38dfa9d67f83ba6617 189 Gene3D G3DSA:2.30.30.30 4 63 7.2E-18 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 RPIC12D_RS04995 c0d18f9084f78c38dfa9d67f83ba6617 189 Pfam PF09285 Elongation factor P, C-terminal 129 187 6.6E-21 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 RPIC12D_RS04995 c0d18f9084f78c38dfa9d67f83ba6617 189 Gene3D G3DSA:2.40.50.140 128 188 2.6E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04995 c0d18f9084f78c38dfa9d67f83ba6617 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 121 8.0E-21 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 RPIC12D_RS04995 c0d18f9084f78c38dfa9d67f83ba6617 189 SUPERFAMILY SSF50249 65 127 4.71E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04995 c0d18f9084f78c38dfa9d67f83ba6617 189 Hamap MF_00141 Elongation factor P [efp]. 1 188 44.83 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 RPIC12D_RS04995 c0d18f9084f78c38dfa9d67f83ba6617 189 TIGRFAM TIGR00038 efp: translation elongation factor P 4 188 3.1E-62 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 RPIC12D_RS04995 c0d18f9084f78c38dfa9d67f83ba6617 189 PANTHER PTHR30053 3 189 8.2E-66 T 22-04-2016 RPIC12D_RS04995 c0d18f9084f78c38dfa9d67f83ba6617 189 SMART SM01185 67 121 2.3E-25 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 RPIC12D_RS04995 c0d18f9084f78c38dfa9d67f83ba6617 189 PIRSF PIRSF005901 2 189 4.9E-53 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 RPIC12D_RS04995 c0d18f9084f78c38dfa9d67f83ba6617 189 SUPERFAMILY SSF50249 128 188 1.88E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04995 c0d18f9084f78c38dfa9d67f83ba6617 189 SUPERFAMILY SSF50104 4 63 4.99E-15 T 22-04-2016 IPR008991 Translation protein SH3-like domain RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 246 2.1E-69 T 22-04-2016 RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 4.6E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 4.6E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 4.6E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.6E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.6E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.6E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 8.4E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 8.4E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 8.4E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 247 2.5E-103 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 PANTHER PTHR24322 12 140 4.2E-68 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 PANTHER PTHR24322 156 188 4.2E-68 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 SUPERFAMILY SSF51735 7 248 4.11E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 Gene3D G3DSA:3.40.50.720 2 248 3.2E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 PANTHER PTHR24322:SF635 12 140 4.2E-68 T 22-04-2016 RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 PANTHER PTHR24322:SF635 156 188 4.2E-68 T 22-04-2016 RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 1.4E-5 T 22-04-2016 RPIC12D_RS04910 b6da3875c37d8c4b9fe21f6564a09374 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 620 45.129 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 PANTHER PTHR19375 19 609 1.2E-267 T 22-04-2016 RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 Gene3D G3DSA:3.90.640.10 238 313 2.1E-7 T 22-04-2016 RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 Gene3D G3DSA:3.30.30.30 74 109 5.7E-7 T 22-04-2016 RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 SUPERFAMILY SSF100934 508 619 3.73E-36 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 Gene3D G3DSA:2.60.34.10 391 532 2.5E-52 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 Gene3D G3DSA:3.30.420.40 20 73 3.7E-54 T 22-04-2016 RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 Gene3D G3DSA:3.30.420.40 132 204 3.7E-54 T 22-04-2016 RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 204 217 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 Pfam PF00012 Hsp70 protein 21 602 2.3E-181 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 SUPERFAMILY SSF53067 19 195 7.03E-54 T 22-04-2016 RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 SUPERFAMILY SSF100920 388 541 1.44E-48 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 PRINTS PR00301 70kDa heat shock protein signature 470 486 3.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 PRINTS PR00301 70kDa heat shock protein signature 151 171 3.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 PRINTS PR00301 70kDa heat shock protein signature 48 60 3.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 PRINTS PR00301 70kDa heat shock protein signature 389 408 3.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 PRINTS PR00301 70kDa heat shock protein signature 20 33 3.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 PRINTS PR00301 70kDa heat shock protein signature 210 220 3.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 PRINTS PR00301 70kDa heat shock protein signature 363 383 3.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 PRINTS PR00301 70kDa heat shock protein signature 332 348 3.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 335 349 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 619 3.3E-287 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 PANTHER PTHR19375:SF176 19 609 1.2E-267 T 22-04-2016 RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 Gene3D G3DSA:1.20.1270.10 533 619 9.5E-32 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 SUPERFAMILY SSF53067 200 379 3.82E-49 T 22-04-2016 RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 Gene3D G3DSA:3.30.420.40 205 237 3.1E-30 T 22-04-2016 RPIC12D_RS04765 a7c576e6990b155bc22f46ceceb2a1c3 621 Gene3D G3DSA:3.30.420.40 317 359 3.1E-30 T 22-04-2016 RPIC12D_RS20865 4852680fedc01c77af35b40a9fab17b8 263 Pfam PF01261 Xylose isomerase-like TIM barrel 38 216 8.0E-8 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC12D_RS20865 4852680fedc01c77af35b40a9fab17b8 263 Gene3D G3DSA:3.20.20.150 11 263 3.8E-74 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC12D_RS20865 4852680fedc01c77af35b40a9fab17b8 263 SUPERFAMILY SSF51658 12 263 6.5E-56 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC12D_RS06585 301f6000bc928083d62084ebb2bb8353 456 PANTHER PTHR32472 2 452 3.0E-211 T 22-04-2016 RPIC12D_RS06585 301f6000bc928083d62084ebb2bb8353 456 Pfam PF13481 AAA domain 62 219 4.2E-18 T 22-04-2016 RPIC12D_RS06585 301f6000bc928083d62084ebb2bb8353 456 SUPERFAMILY SSF52540 67 284 7.84E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06585 301f6000bc928083d62084ebb2bb8353 456 PRINTS PR01874 DNA repair protein radA signature 245 271 3.4E-95 T 22-04-2016 RPIC12D_RS06585 301f6000bc928083d62084ebb2bb8353 456 PRINTS PR01874 DNA repair protein radA signature 319 342 3.4E-95 T 22-04-2016 RPIC12D_RS06585 301f6000bc928083d62084ebb2bb8353 456 PRINTS PR01874 DNA repair protein radA signature 121 138 3.4E-95 T 22-04-2016 RPIC12D_RS06585 301f6000bc928083d62084ebb2bb8353 456 PRINTS PR01874 DNA repair protein radA signature 210 238 3.4E-95 T 22-04-2016 RPIC12D_RS06585 301f6000bc928083d62084ebb2bb8353 456 PRINTS PR01874 DNA repair protein radA signature 10 34 3.4E-95 T 22-04-2016 RPIC12D_RS06585 301f6000bc928083d62084ebb2bb8353 456 PRINTS PR01874 DNA repair protein radA signature 171 195 3.4E-95 T 22-04-2016 RPIC12D_RS06585 301f6000bc928083d62084ebb2bb8353 456 PRINTS PR01874 DNA repair protein radA signature 80 108 3.4E-95 T 22-04-2016 RPIC12D_RS06585 301f6000bc928083d62084ebb2bb8353 456 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 448 1.3E-195 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 RPIC12D_RS06585 301f6000bc928083d62084ebb2bb8353 456 SMART SM00382 88 241 7.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS06585 301f6000bc928083d62084ebb2bb8353 456 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 361 449 1.4E-4 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 RPIC12D_RS06585 301f6000bc928083d62084ebb2bb8353 456 Gene3D G3DSA:3.30.230.10 281 450 1.0E-32 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC12D_RS06585 301f6000bc928083d62084ebb2bb8353 456 Gene3D G3DSA:3.40.50.300 57 272 1.1E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06585 301f6000bc928083d62084ebb2bb8353 456 SUPERFAMILY SSF54211 252 266 3.79E-40 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS06585 301f6000bc928083d62084ebb2bb8353 456 SUPERFAMILY SSF54211 300 452 3.79E-40 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS01110 e5482ed66ccd4266f2778f784dd6c3f2 91 PANTHER PTHR37424 2 83 2.0E-13 T 22-04-2016 RPIC12D_RS01110 e5482ed66ccd4266f2778f784dd6c3f2 91 PANTHER PTHR37424:SF1 2 83 2.0E-13 T 22-04-2016 RPIC12D_RS01110 e5482ed66ccd4266f2778f784dd6c3f2 91 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 51 5.2E-10 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain RPIC12D_RS12560 a5b7af8c231d8d7cb7baede805723c55 274 PIRSF PIRSF000193 4 270 2.8E-71 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RPIC12D_RS12560 a5b7af8c231d8d7cb7baede805723c55 274 SUPERFAMILY SSF51735 6 160 1.23E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS12560 a5b7af8c231d8d7cb7baede805723c55 274 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 7 267 3.4E-76 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RPIC12D_RS12560 a5b7af8c231d8d7cb7baede805723c55 274 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 99 2.9E-18 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RPIC12D_RS12560 a5b7af8c231d8d7cb7baede805723c55 274 PANTHER PTHR11645 1 274 4.8E-95 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RPIC12D_RS12560 a5b7af8c231d8d7cb7baede805723c55 274 PANTHER PTHR11645:SF0 1 274 4.8E-95 T 22-04-2016 RPIC12D_RS12560 a5b7af8c231d8d7cb7baede805723c55 274 Gene3D G3DSA:3.40.50.720 4 160 3.6E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS12560 a5b7af8c231d8d7cb7baede805723c55 274 SUPERFAMILY SSF48179 163 271 8.84E-33 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS12560 a5b7af8c231d8d7cb7baede805723c55 274 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 5 267 26.577 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RPIC12D_RS12560 a5b7af8c231d8d7cb7baede805723c55 274 Gene3D G3DSA:1.10.3730.10 163 267 1.3E-32 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RPIC12D_RS12560 a5b7af8c231d8d7cb7baede805723c55 274 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 245 - T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RPIC12D_RS12560 a5b7af8c231d8d7cb7baede805723c55 274 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 267 1.7E-32 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RPIC12D_RS05565 c36cac9d4bb2bd4feeb02fad5f1a0dae 628 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 108 527 6.2E-82 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RPIC12D_RS05565 c36cac9d4bb2bd4feeb02fad5f1a0dae 628 Gene3D G3DSA:3.10.105.10 341 585 5.2E-53 T 22-04-2016 RPIC12D_RS05565 c36cac9d4bb2bd4feeb02fad5f1a0dae 628 PANTHER PTHR30290:SF2 1 376 3.0E-152 T 22-04-2016 RPIC12D_RS05565 c36cac9d4bb2bd4feeb02fad5f1a0dae 628 PANTHER PTHR30290:SF2 405 625 3.0E-152 T 22-04-2016 RPIC12D_RS05565 c36cac9d4bb2bd4feeb02fad5f1a0dae 628 PIRSF PIRSF002741 5 617 5.2E-90 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RPIC12D_RS05565 c36cac9d4bb2bd4feeb02fad5f1a0dae 628 SUPERFAMILY SSF53850 57 377 2.35E-115 T 22-04-2016 RPIC12D_RS05565 c36cac9d4bb2bd4feeb02fad5f1a0dae 628 SUPERFAMILY SSF53850 407 617 2.35E-115 T 22-04-2016 RPIC12D_RS05565 c36cac9d4bb2bd4feeb02fad5f1a0dae 628 PANTHER PTHR30290 1 376 3.0E-152 T 22-04-2016 RPIC12D_RS05565 c36cac9d4bb2bd4feeb02fad5f1a0dae 628 PANTHER PTHR30290 405 625 3.0E-152 T 22-04-2016 RPIC12D_RS05565 c36cac9d4bb2bd4feeb02fad5f1a0dae 628 Gene3D G3DSA:3.40.190.10 166 340 3.5E-32 T 22-04-2016 RPIC12D_RS02795 2a4ecf52b65a7ae6a02822733e11fe31 122 SUPERFAMILY SSF52172 5 121 1.39E-38 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS02795 2a4ecf52b65a7ae6a02822733e11fe31 122 PANTHER PTHR26402 4 122 6.1E-42 T 22-04-2016 RPIC12D_RS02795 2a4ecf52b65a7ae6a02822733e11fe31 122 Gene3D G3DSA:3.40.50.2300 4 121 1.1E-39 T 22-04-2016 RPIC12D_RS02795 2a4ecf52b65a7ae6a02822733e11fe31 122 Pfam PF00072 Response regulator receiver domain 6 117 1.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS02795 2a4ecf52b65a7ae6a02822733e11fe31 122 SMART SM00448 4 117 6.9E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS14710 92edb8bdc7fffcdaa4d6d657f101e6a9 122 SUPERFAMILY SSF50193 1 122 2.62E-50 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14710 92edb8bdc7fffcdaa4d6d657f101e6a9 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.5E-57 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 RPIC12D_RS14710 92edb8bdc7fffcdaa4d6d657f101e6a9 122 PANTHER PTHR11761:SF3 1 122 8.9E-73 T 22-04-2016 RPIC12D_RS14710 92edb8bdc7fffcdaa4d6d657f101e6a9 122 SMART SM01374 1 122 9.2E-85 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14710 92edb8bdc7fffcdaa4d6d657f101e6a9 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site RPIC12D_RS14710 92edb8bdc7fffcdaa4d6d657f101e6a9 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.826 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14710 92edb8bdc7fffcdaa4d6d657f101e6a9 122 PANTHER PTHR11761 1 122 8.9E-73 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14710 92edb8bdc7fffcdaa4d6d657f101e6a9 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.2E-54 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14710 92edb8bdc7fffcdaa4d6d657f101e6a9 122 Gene3D G3DSA:2.40.150.20 1 122 2.8E-54 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14740 3c87a101cfc30797a6e451a467b1fb10 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.1E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14740 3c87a101cfc30797a6e451a467b1fb10 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.1E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14740 3c87a101cfc30797a6e451a467b1fb10 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.1E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14740 3c87a101cfc30797a6e451a467b1fb10 91 Gene3D G3DSA:3.30.860.10 1 90 3.9E-42 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14740 3c87a101cfc30797a6e451a467b1fb10 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.91 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14740 3c87a101cfc30797a6e451a467b1fb10 91 PIRSF PIRSF002144 1 91 2.6E-33 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14740 3c87a101cfc30797a6e451a467b1fb10 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 RPIC12D_RS14740 3c87a101cfc30797a6e451a467b1fb10 91 PANTHER PTHR11880 1 91 2.4E-56 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14740 3c87a101cfc30797a6e451a467b1fb10 91 Pfam PF00203 Ribosomal protein S19 3 83 5.9E-38 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14740 3c87a101cfc30797a6e451a467b1fb10 91 SUPERFAMILY SSF54570 3 84 1.14E-35 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14740 3c87a101cfc30797a6e451a467b1fb10 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.3E-46 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 SUPERFAMILY SSF53671 7 304 2.74E-103 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 PANTHER PTHR11405 8 304 1.4E-130 T 22-04-2016 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 Gene3D G3DSA:3.40.50.1370 7 144 1.8E-55 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 304 5.5E-107 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 PANTHER PTHR11405:SF1 8 304 1.4E-130 T 22-04-2016 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 4.7E-49 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 283 294 5.4E-29 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 5.4E-29 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 5.4E-29 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 5.4E-29 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 221 231 5.4E-29 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 6.7E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 6.7E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 6.7E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 6.7E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 305 76.15 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 Gene3D G3DSA:3.40.50.1370 145 291 8.0E-56 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS12140 522afa034912ff9fa74ef29b80d5dc59 308 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 154 302 7.7E-49 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS15020 ad5afd4cfe2b4a9b279f82a93f91ea79 363 SUPERFAMILY SSF53822 17 362 5.3E-65 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS15020 ad5afd4cfe2b4a9b279f82a93f91ea79 363 Gene3D G3DSA:3.40.50.2300 12 210 2.5E-36 T 22-04-2016 RPIC12D_RS15020 ad5afd4cfe2b4a9b279f82a93f91ea79 363 Pfam PF13458 Periplasmic binding protein 19 351 2.6E-57 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC12D_RS15020 ad5afd4cfe2b4a9b279f82a93f91ea79 363 PANTHER PTHR30483 1 352 1.8E-40 T 22-04-2016 RPIC12D_RS15220 bb0c4dd96607fc75a25fd276cf4ad97a 646 Gene3D G3DSA:3.40.50.720 399 534 5.4E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS15220 bb0c4dd96607fc75a25fd276cf4ad97a 646 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 286 7.6E-86 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 RPIC12D_RS15220 bb0c4dd96607fc75a25fd276cf4ad97a 646 Pfam PF02254 TrkA-N domain 405 517 7.3E-24 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RPIC12D_RS15220 bb0c4dd96607fc75a25fd276cf4ad97a 646 PANTHER PTHR16254:SF6 1 559 3.1E-223 T 22-04-2016 RPIC12D_RS15220 bb0c4dd96607fc75a25fd276cf4ad97a 646 Pfam PF00999 Sodium/hydrogen exchanger family 11 375 1.5E-67 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RPIC12D_RS15220 bb0c4dd96607fc75a25fd276cf4ad97a 646 SUPERFAMILY SSF51735 403 534 5.04E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS15220 bb0c4dd96607fc75a25fd276cf4ad97a 646 PRINTS PR00335 TrkA potassium uptake protein signature 461 471 2.1E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RPIC12D_RS15220 bb0c4dd96607fc75a25fd276cf4ad97a 646 PRINTS PR00335 TrkA potassium uptake protein signature 450 460 2.1E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RPIC12D_RS15220 bb0c4dd96607fc75a25fd276cf4ad97a 646 PRINTS PR00335 TrkA potassium uptake protein signature 421 435 2.1E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RPIC12D_RS15220 bb0c4dd96607fc75a25fd276cf4ad97a 646 PRINTS PR00335 TrkA potassium uptake protein signature 404 418 2.1E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RPIC12D_RS15220 bb0c4dd96607fc75a25fd276cf4ad97a 646 PANTHER PTHR16254 1 559 3.1E-223 T 22-04-2016 RPIC12D_RS01580 f18202f3cb035b4238da2ac0aad1ec8b 198 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 44 195 1.0E-6 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RPIC12D_RS01580 f18202f3cb035b4238da2ac0aad1ec8b 198 Gene3D G3DSA:2.50.20.10 33 195 3.1E-18 T 22-04-2016 RPIC12D_RS01580 f18202f3cb035b4238da2ac0aad1ec8b 198 SUPERFAMILY SSF89392 32 193 1.18E-17 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX RPIC12D_RS11655 81d757192c63d31c2a6357d2c74df2eb 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.62 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS11655 81d757192c63d31c2a6357d2c74df2eb 56 PANTHER PTHR15238 1 56 1.5E-22 T 22-04-2016 RPIC12D_RS11655 81d757192c63d31c2a6357d2c74df2eb 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 3.9E-27 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS11655 81d757192c63d31c2a6357d2c74df2eb 56 Pfam PF00471 Ribosomal protein L33 9 54 2.8E-18 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS11655 81d757192c63d31c2a6357d2c74df2eb 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS11655 81d757192c63d31c2a6357d2c74df2eb 56 SUPERFAMILY SSF57829 3 54 4.33E-19 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 RPIC12D_RS26790 5805ae88fc0821c53823ab49abcb6f8f 68 SUPERFAMILY SSF53850 2 67 1.52E-16 T 22-04-2016 RPIC12D_RS26790 5805ae88fc0821c53823ab49abcb6f8f 68 Gene3D G3DSA:3.40.190.10 2 67 3.0E-17 T 22-04-2016 RPIC12D_RS26790 5805ae88fc0821c53823ab49abcb6f8f 68 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 14 67 1.7E-12 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS26790 5805ae88fc0821c53823ab49abcb6f8f 68 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 36 49 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 RPIC12D_RS12135 9777c8f8f16c2ab482386a27d97fee44 445 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS12135 9777c8f8f16c2ab482386a27d97fee44 445 Gene3D G3DSA:1.10.287.400 377 440 8.0E-33 T 22-04-2016 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS12135 9777c8f8f16c2ab482386a27d97fee44 445 PANTHER PTHR11587:SF2 1 426 1.5E-174 T 22-04-2016 RPIC12D_RS12135 9777c8f8f16c2ab482386a27d97fee44 445 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 420 8.0E-158 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS12135 9777c8f8f16c2ab482386a27d97fee44 445 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 444 69.222 T 22-04-2016 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS12135 9777c8f8f16c2ab482386a27d97fee44 445 PANTHER PTHR11587 1 426 1.5E-174 T 22-04-2016 RPIC12D_RS12135 9777c8f8f16c2ab482386a27d97fee44 445 Pfam PF00764 Arginosuccinate synthase 16 406 1.5E-59 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS12135 9777c8f8f16c2ab482386a27d97fee44 445 SUPERFAMILY SSF52402 4 184 6.05E-31 T 22-04-2016 RPIC12D_RS12135 9777c8f8f16c2ab482386a27d97fee44 445 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS12135 9777c8f8f16c2ab482386a27d97fee44 445 Gene3D G3DSA:3.40.50.620 4 174 9.4E-44 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS12135 9777c8f8f16c2ab482386a27d97fee44 445 SUPERFAMILY SSF69864 190 441 5.89E-79 T 22-04-2016 RPIC12D_RS12135 9777c8f8f16c2ab482386a27d97fee44 445 Gene3D G3DSA:3.90.1260.10 175 373 1.7E-65 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS15465 48684d856e8d40c4286d8a34fc243a30 105 PANTHER PTHR10772 1 104 5.6E-43 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC12D_RS15465 48684d856e8d40c4286d8a34fc243a30 105 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.017 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC12D_RS15465 48684d856e8d40c4286d8a34fc243a30 105 SUPERFAMILY SSF50129 1 95 3.06E-33 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS15465 48684d856e8d40c4286d8a34fc243a30 105 SMART SM00883 2 94 2.0E-55 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC12D_RS15465 48684d856e8d40c4286d8a34fc243a30 105 Gene3D G3DSA:2.30.33.40 1 95 2.1E-36 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC12D_RS15465 48684d856e8d40c4286d8a34fc243a30 105 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 1.3E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC12D_RS15465 48684d856e8d40c4286d8a34fc243a30 105 PRINTS PR00297 10kDa chaperonin signature 81 94 3.1E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC12D_RS15465 48684d856e8d40c4286d8a34fc243a30 105 PRINTS PR00297 10kDa chaperonin signature 60 72 3.1E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC12D_RS15465 48684d856e8d40c4286d8a34fc243a30 105 PRINTS PR00297 10kDa chaperonin signature 3 18 3.1E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC12D_RS15465 48684d856e8d40c4286d8a34fc243a30 105 PRINTS PR00297 10kDa chaperonin signature 25 46 3.1E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC12D_RS15465 48684d856e8d40c4286d8a34fc243a30 105 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 RPIC12D_RS12190 3387961996294c4c0efe53fa341ebe4e 218 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 39 215 2.9E-54 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like RPIC12D_RS12190 3387961996294c4c0efe53fa341ebe4e 218 SUPERFAMILY SSF51197 23 216 3.16E-58 T 22-04-2016 RPIC12D_RS12190 3387961996294c4c0efe53fa341ebe4e 218 Gene3D G3DSA:2.60.120.590 25 217 5.0E-53 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like RPIC12D_RS12190 3387961996294c4c0efe53fa341ebe4e 218 PANTHER PTHR16557 51 215 9.7E-44 T 22-04-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 RPIC12D_RS11730 f40673ff6345f985aaf897805bb3c5c5 401 Pfam PF02441 Flavoprotein 6 134 1.8E-34 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RPIC12D_RS11730 f40673ff6345f985aaf897805bb3c5c5 401 Gene3D G3DSA:3.40.50.10300 185 397 1.4E-77 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 RPIC12D_RS11730 f40673ff6345f985aaf897805bb3c5c5 401 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 185 367 2.2E-63 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 RPIC12D_RS11730 f40673ff6345f985aaf897805bb3c5c5 401 PANTHER PTHR14359 1 396 1.5E-160 T 22-04-2016 RPIC12D_RS11730 f40673ff6345f985aaf897805bb3c5c5 401 PANTHER PTHR14359:SF20 1 396 1.5E-160 T 22-04-2016 RPIC12D_RS11730 f40673ff6345f985aaf897805bb3c5c5 401 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 392 5.9E-127 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 RPIC12D_RS11730 f40673ff6345f985aaf897805bb3c5c5 401 SUPERFAMILY SSF102645 174 396 1.83E-70 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 RPIC12D_RS11730 f40673ff6345f985aaf897805bb3c5c5 401 Gene3D G3DSA:3.40.50.1950 2 184 1.2E-65 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RPIC12D_RS11730 f40673ff6345f985aaf897805bb3c5c5 401 SUPERFAMILY SSF52507 3 180 1.44E-60 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RPIC12D_RS02230 8bc2a63d854a64762ce01a3453b8114d 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 139 152 6.5E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS02230 8bc2a63d854a64762ce01a3453b8114d 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 125 138 6.5E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS02230 8bc2a63d854a64762ce01a3453b8114d 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 80 95 6.5E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS02230 8bc2a63d854a64762ce01a3453b8114d 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 253 267 6.5E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS02230 8bc2a63d854a64762ce01a3453b8114d 318 Gene3D G3DSA:3.40.50.1820 32 304 2.0E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS02230 8bc2a63d854a64762ce01a3453b8114d 318 SUPERFAMILY SSF53474 30 305 8.44E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS02230 8bc2a63d854a64762ce01a3453b8114d 318 PANTHER PTHR10992 235 309 1.5E-38 T 22-04-2016 RPIC12D_RS02230 8bc2a63d854a64762ce01a3453b8114d 318 PANTHER PTHR10992 37 210 1.5E-38 T 22-04-2016 RPIC12D_RS02230 8bc2a63d854a64762ce01a3453b8114d 318 Pfam PF00561 alpha/beta hydrolase fold 54 158 2.5E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 5 348 1.5E-144 T 22-04-2016 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 Gene3D G3DSA:1.20.200.10 103 368 5.9E-85 T 22-04-2016 RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 SMART SM00998 363 445 5.5E-20 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 PANTHER PTHR11444:SF21 5 445 2.7E-177 T 22-04-2016 RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 PANTHER PTHR11444 5 445 2.7E-177 T 22-04-2016 IPR000362 Fumarate lyase family RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 PRINTS PR00145 Argininosuccinate lyase family signature 230 254 3.9E-7 T 22-04-2016 RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 PRINTS PR00145 Argininosuccinate lyase family signature 275 291 3.9E-7 T 22-04-2016 RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 PRINTS PR00145 Argininosuccinate lyase family signature 140 160 3.9E-7 T 22-04-2016 RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 PRINTS PR00145 Argininosuccinate lyase family signature 99 121 3.9E-7 T 22-04-2016 RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 ProSitePatterns PS00163 Fumarate lyases signature. 275 284 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 Gene3D G3DSA:1.10.40.30 369 445 4.7E-28 T 22-04-2016 RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 SUPERFAMILY SSF48557 5 449 3.93E-110 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 Gene3D G3DSA:1.10.275.10 9 102 7.7E-35 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 Pfam PF00206 Lyase 11 297 1.1E-49 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 PRINTS PR00149 Fumarate lyase superfamily signature 100 118 3.0E-20 T 22-04-2016 IPR000362 Fumarate lyase family RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 PRINTS PR00149 Fumarate lyase superfamily signature 230 257 3.0E-20 T 22-04-2016 IPR000362 Fumarate lyase family RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 PRINTS PR00149 Fumarate lyase superfamily signature 145 163 3.0E-20 T 22-04-2016 IPR000362 Fumarate lyase family RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 PRINTS PR00149 Fumarate lyase superfamily signature 275 291 3.0E-20 T 22-04-2016 IPR000362 Fumarate lyase family RPIC12D_RS10390 18844542f89502dc04f1bb9c162bc770 453 Pfam PF10397 Adenylosuccinate lyase C-terminus 364 444 4.6E-17 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 RPIC12D_RS08605 15a7b6fd72e3aa77ec54b6d965efc4d8 157 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 75 1.0E-11 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC12D_RS08605 15a7b6fd72e3aa77ec54b6d965efc4d8 157 Gene3D G3DSA:3.40.50.1240 1 155 5.0E-30 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC12D_RS08605 15a7b6fd72e3aa77ec54b6d965efc4d8 157 PANTHER PTHR23029 1 75 9.5E-13 T 22-04-2016 RPIC12D_RS08605 15a7b6fd72e3aa77ec54b6d965efc4d8 157 PANTHER PTHR23029:SF49 1 75 9.5E-13 T 22-04-2016 RPIC12D_RS08605 15a7b6fd72e3aa77ec54b6d965efc4d8 157 SUPERFAMILY SSF53254 2 135 1.7E-21 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC12D_RS08605 15a7b6fd72e3aa77ec54b6d965efc4d8 157 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 133 2.9E-23 T 22-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- RPIC12D_RS08605 15a7b6fd72e3aa77ec54b6d965efc4d8 157 SMART SM00855 2 113 2.5E-9 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 Pfam PF05190 MutS family domain IV 444 535 3.9E-31 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 PIRSF PIRSF037677 11 832 9.6E-151 T 22-04-2016 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 Gene3D G3DSA:3.40.50.300 584 813 3.4E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 Gene3D G3DSA:1.10.1420.10 336 493 3.0E-49 T 22-04-2016 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 21 875 0.0 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 Pfam PF05188 MutS domain II 142 268 1.0E-17 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 703 719 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 Pfam PF00488 MutS domain V 626 811 6.4E-82 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 SUPERFAMILY SSF48334 284 580 3.01E-85 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 Gene3D G3DSA:3.40.1170.10 19 134 1.9E-51 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 SUPERFAMILY SSF55271 18 129 2.35E-43 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 SMART SM00534 622 809 1.1E-113 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 Pfam PF05192 MutS domain III 286 575 7.4E-37 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 SUPERFAMILY SSF53150 131 297 2.49E-33 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 SUPERFAMILY SSF52540 583 813 8.65E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 Pfam PF01624 MutS domain I 22 133 1.2E-42 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 SMART SM00533 300 607 9.2E-95 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 Gene3D G3DSA:3.30.420.110 141 272 6.1E-33 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 21 870 24.96 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 PANTHER PTHR11361 20 876 0.0 T 22-04-2016 RPIC12D_RS05465 c5fce42617a776cb44b448b509eff1cf 882 PANTHER PTHR11361:SF86 20 876 0.0 T 22-04-2016 RPIC12D_RS12465 e4642e4c3d4e41f308e6ac71a1bc813c 289 PANTHER PTHR23088:SF27 22 287 7.6E-99 T 22-04-2016 RPIC12D_RS12465 e4642e4c3d4e41f308e6ac71a1bc813c 289 SUPERFAMILY SSF56317 22 287 7.19E-82 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RPIC12D_RS12465 e4642e4c3d4e41f308e6ac71a1bc813c 289 Pfam PF00795 Carbon-nitrogen hydrolase 24 279 5.2E-55 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RPIC12D_RS12465 e4642e4c3d4e41f308e6ac71a1bc813c 289 PANTHER PTHR23088 22 287 7.6E-99 T 22-04-2016 RPIC12D_RS12465 e4642e4c3d4e41f308e6ac71a1bc813c 289 Gene3D G3DSA:3.60.110.10 21 287 2.1E-85 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RPIC12D_RS12465 e4642e4c3d4e41f308e6ac71a1bc813c 289 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 171 191 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site RPIC12D_RS16805 e6eea003fead10a7e803d51bf0027211 443 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 318 329 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS16805 e6eea003fead10a7e803d51bf0027211 443 Gene3D G3DSA:3.40.50.150 234 441 1.5E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS16805 e6eea003fead10a7e803d51bf0027211 443 Pfam PF01189 16S rRNA methyltransferase RsmB/F 242 439 8.8E-51 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS16805 e6eea003fead10a7e803d51bf0027211 443 PANTHER PTHR22807 44 391 7.3E-75 T 22-04-2016 RPIC12D_RS16805 e6eea003fead10a7e803d51bf0027211 443 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 13 442 7.9E-95 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS16805 e6eea003fead10a7e803d51bf0027211 443 Gene3D G3DSA:1.10.287.730 153 176 3.7E-8 T 22-04-2016 RPIC12D_RS16805 e6eea003fead10a7e803d51bf0027211 443 Gene3D G3DSA:1.10.940.10 13 152 1.6E-21 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RPIC12D_RS16805 e6eea003fead10a7e803d51bf0027211 443 PANTHER PTHR22807:SF30 44 391 7.3E-75 T 22-04-2016 RPIC12D_RS16805 e6eea003fead10a7e803d51bf0027211 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 369 385 1.6E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS16805 e6eea003fead10a7e803d51bf0027211 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 224 238 1.6E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS16805 e6eea003fead10a7e803d51bf0027211 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 253 263 1.6E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS16805 e6eea003fead10a7e803d51bf0027211 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 424 441 1.6E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS16805 e6eea003fead10a7e803d51bf0027211 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 319 331 1.6E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS16805 e6eea003fead10a7e803d51bf0027211 443 Pfam PF01029 NusB family 42 130 5.3E-6 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RPIC12D_RS16805 e6eea003fead10a7e803d51bf0027211 443 Gene3D G3DSA:3.30.70.1170 177 232 1.5E-22 T 22-04-2016 RPIC12D_RS16805 e6eea003fead10a7e803d51bf0027211 443 SUPERFAMILY SSF48013 14 153 3.27E-20 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RPIC12D_RS16805 e6eea003fead10a7e803d51bf0027211 443 SUPERFAMILY SSF53335 143 442 5.06E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 Pfam PF08275 DNA primase catalytic core, N-terminal domain 127 257 3.2E-36 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 SMART SM00493 265 336 4.8E-14 T 22-04-2016 IPR006171 Toprim domain RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 PANTHER PTHR30313 1 600 1.2E-140 T 22-04-2016 RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 Hamap MF_00974 DNA primase [dnaG]. 1 593 28.355 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 PIRSF PIRSF002811 1 601 3.3E-140 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 SUPERFAMILY SSF56731 116 427 6.41E-101 T 22-04-2016 RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 SUPERFAMILY SSF57783 2 97 1.34E-36 T 22-04-2016 RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 Gene3D G3DSA:1.10.860.10 450 596 1.2E-11 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 TIGRFAM TIGR01391 dnaG: DNA primase 2 423 4.1E-136 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 SMART SM00400 33 87 4.4E-34 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 Pfam PF08278 DNA primase DnaG DnaB-binding 465 592 2.8E-15 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 Pfam PF13662 Toprim domain 266 334 1.1E-15 T 22-04-2016 IPR006171 Toprim domain RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 Pfam PF01807 CHC2 zinc finger 3 97 2.8E-39 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 Gene3D G3DSA:1.20.50.20 374 431 9.4E-19 T 22-04-2016 RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 Gene3D G3DSA:3.90.580.10 2 98 5.3E-40 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 Gene3D G3DSA:3.40.1360.10 247 373 9.7E-44 T 22-04-2016 RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 Pfam PF10410 DnaB-helicase binding domain of primase 375 428 1.3E-10 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 Gene3D G3DSA:3.90.980.10 117 246 1.1E-40 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 SMART SM00766 463 593 5.6E-25 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 RPIC12D_RS10215 b791794d4b24c59f013ada87baa8337e 603 SUPERFAMILY SSF117023 465 594 5.1E-8 T 22-04-2016 RPIC12D_RS12920 42468efaa004ee2b07a19fab6e1208e6 382 SUPERFAMILY SSF51604 95 357 9.56E-75 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC12D_RS12920 42468efaa004ee2b07a19fab6e1208e6 382 PANTHER PTHR13794 1 382 1.3E-153 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 RPIC12D_RS12920 42468efaa004ee2b07a19fab6e1208e6 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 RPIC12D_RS12920 42468efaa004ee2b07a19fab6e1208e6 382 SMART SM00922 125 230 6.3E-20 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RPIC12D_RS12920 42468efaa004ee2b07a19fab6e1208e6 382 SUPERFAMILY SSF54826 1 112 4.46E-33 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIC12D_RS12920 42468efaa004ee2b07a19fab6e1208e6 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 8.3E-30 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RPIC12D_RS12920 42468efaa004ee2b07a19fab6e1208e6 382 Gene3D G3DSA:3.20.20.120 117 343 1.9E-80 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC12D_RS12920 42468efaa004ee2b07a19fab6e1208e6 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 RPIC12D_RS12920 42468efaa004ee2b07a19fab6e1208e6 382 Gene3D G3DSA:3.30.390.10 1 116 2.1E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIC12D_RS12920 42468efaa004ee2b07a19fab6e1208e6 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 85.493 T 22-04-2016 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6|UniPathway: UPA00081 RPIC12D_RS12920 42468efaa004ee2b07a19fab6e1208e6 382 Pfam PF13378 Enolase C-terminal domain-like 135 355 4.8E-57 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC12D_RS12920 42468efaa004ee2b07a19fab6e1208e6 382 PANTHER PTHR13794:SF4 1 382 1.3E-153 T 22-04-2016 RPIC12D_RS06250 6c439cdd7530a93bbe2754e2dce11961 108 SUPERFAMILY SSF50249 10 101 1.95E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS06250 6c439cdd7530a93bbe2754e2dce11961 108 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 11 103 1.6E-29 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 RPIC12D_RS06250 6c439cdd7530a93bbe2754e2dce11961 108 PIRSF PIRSF003135 4 105 1.9E-12 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 RPIC12D_RS06250 6c439cdd7530a93bbe2754e2dce11961 108 Gene3D G3DSA:2.40.50.140 2 101 4.2E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS01650 191ce55d1456683ad4a5dc54e5b9bea1 169 PRINTS PR01100 Shikimate kinase family signature 97 114 9.5E-5 T 22-04-2016 RPIC12D_RS01650 191ce55d1456683ad4a5dc54e5b9bea1 169 PRINTS PR01100 Shikimate kinase family signature 3 18 9.5E-5 T 22-04-2016 RPIC12D_RS01650 191ce55d1456683ad4a5dc54e5b9bea1 169 Pfam PF01202 Shikimate kinase 9 160 4.4E-22 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS01650 191ce55d1456683ad4a5dc54e5b9bea1 169 Gene3D G3DSA:3.40.50.300 1 160 5.9E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01650 191ce55d1456683ad4a5dc54e5b9bea1 169 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 3 158 4.0E-55 T 22-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 RPIC12D_RS01650 191ce55d1456683ad4a5dc54e5b9bea1 169 SUPERFAMILY SSF52540 1 159 4.12E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01650 191ce55d1456683ad4a5dc54e5b9bea1 169 PANTHER PTHR11603 1 165 2.6E-82 T 22-04-2016 RPIC12D_RS17140 b9732ec483752c331a0d51b49f6305b1 342 Gene3D G3DSA:3.40.50.720 118 301 5.9E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS17140 b9732ec483752c331a0d51b49f6305b1 342 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 115 300 1.2E-51 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RPIC12D_RS17140 b9732ec483752c331a0d51b49f6305b1 342 SUPERFAMILY SSF51735 106 301 5.73E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS17140 b9732ec483752c331a0d51b49f6305b1 342 PANTHER PTHR10996:SF127 1 325 8.5E-97 T 22-04-2016 RPIC12D_RS17140 b9732ec483752c331a0d51b49f6305b1 342 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 20 331 3.6E-15 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RPIC12D_RS17140 b9732ec483752c331a0d51b49f6305b1 342 Gene3D G3DSA:3.40.50.720 1 117 2.6E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS17140 b9732ec483752c331a0d51b49f6305b1 342 PANTHER PTHR10996 1 325 8.5E-97 T 22-04-2016 RPIC12D_RS17140 b9732ec483752c331a0d51b49f6305b1 342 SUPERFAMILY SSF52283 1 140 6.17E-20 T 22-04-2016 RPIC12D_RS04290 a77703996f602dae6ac30aa7a43cc1cb 307 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 3.7E-17 T 22-04-2016 IPR000286 Histone deacetylase superfamily RPIC12D_RS04290 a77703996f602dae6ac30aa7a43cc1cb 307 PRINTS PR01270 Histone deacetylase superfamily signature 234 244 3.7E-17 T 22-04-2016 IPR000286 Histone deacetylase superfamily RPIC12D_RS04290 a77703996f602dae6ac30aa7a43cc1cb 307 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 3.7E-17 T 22-04-2016 IPR000286 Histone deacetylase superfamily RPIC12D_RS04290 a77703996f602dae6ac30aa7a43cc1cb 307 Pfam PF00850 Histone deacetylase domain 20 304 3.3E-85 T 22-04-2016 IPR023801 Histone deacetylase domain RPIC12D_RS04290 a77703996f602dae6ac30aa7a43cc1cb 307 Gene3D G3DSA:3.40.800.20 3 305 5.8E-110 T 22-04-2016 IPR023801 Histone deacetylase domain RPIC12D_RS04290 a77703996f602dae6ac30aa7a43cc1cb 307 SUPERFAMILY SSF52768 2 306 2.88E-107 T 22-04-2016 RPIC12D_RS04290 a77703996f602dae6ac30aa7a43cc1cb 307 PANTHER PTHR10625 1 304 1.1E-102 T 22-04-2016 IPR000286 Histone deacetylase superfamily RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 Gene3D G3DSA:2.40.30.10 866 962 4.2E-37 T 22-04-2016 RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 SUPERFAMILY SSF52540 461 634 3.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 SUPERFAMILY SSF46955 3 51 2.01E-10 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 Gene3D G3DSA:3.40.50.10050 765 843 2.5E-26 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 ProSitePatterns PS01176 Initiation factor 2 signature. 915 937 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 PANTHER PTHR23115 817 962 9.5E-205 T 22-04-2016 RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 PANTHER PTHR23115 465 792 9.5E-205 T 22-04-2016 RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 PANTHER PTHR23115 432 447 9.5E-205 T 22-04-2016 RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 381 964 8.6E-265 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 SUPERFAMILY SSF52156 742 871 8.5E-39 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 466 623 7.4E-32 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 4.8E-7 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 386 436 1.2E-14 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 962 17.617 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 SUPERFAMILY SSF50447 866 962 2.95E-34 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 8.5E-12 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 SUPERFAMILY SSF50447 637 719 8.43E-25 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 Gene3D G3DSA:3.30.56.50 3 51 2.9E-17 T 22-04-2016 RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 Pfam PF00009 Elongation factor Tu GTP binding domain 469 624 4.1E-35 T 22-04-2016 RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 Gene3D G3DSA:3.40.50.300 457 623 1.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 PANTHER PTHR23115:SF184 817 962 9.5E-205 T 22-04-2016 RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 PANTHER PTHR23115:SF184 465 792 9.5E-205 T 22-04-2016 RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 PANTHER PTHR23115:SF184 432 447 9.5E-205 T 22-04-2016 RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 Gene3D G3DSA:2.40.30.10 636 729 2.8E-24 T 22-04-2016 RPIC12D_RS06085 ae76f087fbfb7caf0b4c7c32ba969e39 964 Pfam PF11987 Translation-initiation factor 2 749 854 6.0E-39 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RPIC12D_RS02890 f741ea822fbed4e054d45baaa3a274bb 333 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 326 1.4E-164 T 22-04-2016 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00010+4.2.1.11|KEGG: 00520+4.2.1.115|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6143|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 RPIC12D_RS02890 f741ea822fbed4e054d45baaa3a274bb 333 PANTHER PTHR10366:SF360 6 263 2.3E-121 T 22-04-2016 RPIC12D_RS02890 f741ea822fbed4e054d45baaa3a274bb 333 Gene3D G3DSA:3.40.50.720 2 243 3.0E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02890 f741ea822fbed4e054d45baaa3a274bb 333 PANTHER PTHR10366 6 263 2.3E-121 T 22-04-2016 RPIC12D_RS02890 f741ea822fbed4e054d45baaa3a274bb 333 Pfam PF02719 Polysaccharide biosynthesis protein 7 279 1.1E-101 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RPIC12D_RS02890 f741ea822fbed4e054d45baaa3a274bb 333 SUPERFAMILY SSF51735 1 261 1.36E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS16390 01c25eb40f38815d3b45615a7092f84d 207 PANTHER PTHR30042:SF2 16 207 1.9E-89 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RPIC12D_RS16390 01c25eb40f38815d3b45615a7092f84d 207 PANTHER PTHR30042 16 207 1.9E-89 T 22-04-2016 RPIC12D_RS16390 01c25eb40f38815d3b45615a7092f84d 207 PIRSF PIRSF001296 18 207 1.5E-77 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RPIC12D_RS16390 01c25eb40f38815d3b45615a7092f84d 207 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 22 205 1.2E-70 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RPIC12D_RS16390 01c25eb40f38815d3b45615a7092f84d 207 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 19 206 36.299 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RPIC12D_RS16390 01c25eb40f38815d3b45615a7092f84d 207 Pfam PF02669 K+-transporting ATPase, c chain 23 204 7.5E-75 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RPIC12D_RS16215 ba1e41fde7be3baa89bf7b4b0f221199 325 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 197 317 1.3E-23 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC12D_RS16215 ba1e41fde7be3baa89bf7b4b0f221199 325 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 168 2.2E-25 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC12D_RS16215 ba1e41fde7be3baa89bf7b4b0f221199 325 SUPERFAMILY SSF48179 197 318 3.74E-26 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS16215 ba1e41fde7be3baa89bf7b4b0f221199 325 PANTHER PTHR21708:SF29 137 320 2.1E-83 T 22-04-2016 RPIC12D_RS16215 ba1e41fde7be3baa89bf7b4b0f221199 325 PANTHER PTHR21708:SF29 1 121 2.1E-83 T 22-04-2016 RPIC12D_RS16215 ba1e41fde7be3baa89bf7b4b0f221199 325 Gene3D G3DSA:3.40.50.720 2 194 1.1E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS16215 ba1e41fde7be3baa89bf7b4b0f221199 325 Gene3D G3DSA:1.10.1040.10 197 318 9.7E-25 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC12D_RS16215 ba1e41fde7be3baa89bf7b4b0f221199 325 SUPERFAMILY SSF51735 3 157 2.68E-16 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS16215 ba1e41fde7be3baa89bf7b4b0f221199 325 PANTHER PTHR21708 137 320 2.1E-83 T 22-04-2016 RPIC12D_RS16215 ba1e41fde7be3baa89bf7b4b0f221199 325 PANTHER PTHR21708 1 121 2.1E-83 T 22-04-2016 RPIC12D_RS00975 9a30bfa92231133ee1a2436e7101e721 171 SUPERFAMILY SSF52949 7 170 6.39E-65 T 22-04-2016 RPIC12D_RS00975 9a30bfa92231133ee1a2436e7101e721 171 PANTHER PTHR11106 11 167 1.1E-85 T 22-04-2016 RPIC12D_RS00975 9a30bfa92231133ee1a2436e7101e721 171 Pfam PF01661 Macro domain 24 136 2.8E-45 T 22-04-2016 IPR002589 Macro domain RPIC12D_RS00975 9a30bfa92231133ee1a2436e7101e721 171 Gene3D G3DSA:3.40.220.10 8 170 1.5E-68 T 22-04-2016 RPIC12D_RS00975 9a30bfa92231133ee1a2436e7101e721 171 SMART SM00506 7 136 6.8E-51 T 22-04-2016 IPR002589 Macro domain RPIC12D_RS00130 2156ed5b2cd1a970f2f7bca2b6f4b7c1 382 PANTHER PTHR33741 8 291 3.9E-30 T 22-04-2016 RPIC12D_RS00130 2156ed5b2cd1a970f2f7bca2b6f4b7c1 382 Pfam PF00571 CBS domain 317 368 4.9E-10 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS00130 2156ed5b2cd1a970f2f7bca2b6f4b7c1 382 Pfam PF00571 CBS domain 242 293 1.7E-13 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS00130 2156ed5b2cd1a970f2f7bca2b6f4b7c1 382 Gene3D G3DSA:3.10.580.10 237 373 1.4E-32 T 22-04-2016 RPIC12D_RS00130 2156ed5b2cd1a970f2f7bca2b6f4b7c1 382 Pfam PF04982 HPP family 60 180 3.1E-35 T 22-04-2016 IPR007065 HPP RPIC12D_RS00130 2156ed5b2cd1a970f2f7bca2b6f4b7c1 382 SMART SM00116 248 296 9.3E-15 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS00130 2156ed5b2cd1a970f2f7bca2b6f4b7c1 382 SMART SM00116 324 372 1.1E-5 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS00130 2156ed5b2cd1a970f2f7bca2b6f4b7c1 382 SUPERFAMILY SSF54631 228 373 4.51E-33 T 22-04-2016 RPIC12D_RS11060 f697f57143a7b277c7482116522dafa8 326 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 21 310 1.8E-56 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RPIC12D_RS11060 f697f57143a7b277c7482116522dafa8 326 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 326 99.026 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RPIC12D_RS11060 f697f57143a7b277c7482116522dafa8 326 PANTHER PTHR34308:SF1 8 325 3.6E-93 T 22-04-2016 RPIC12D_RS11060 f697f57143a7b277c7482116522dafa8 326 PANTHER PTHR34308 8 325 3.6E-93 T 22-04-2016 RPIC12D_RS11060 f697f57143a7b277c7482116522dafa8 326 Pfam PF03186 CobD/Cbib protein 21 304 7.5E-90 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RPIC12D_RS06410 6a5fda90b42ce634f6759bd529a033ce 330 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 41 320 2.8E-72 T 22-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 RPIC12D_RS06410 6a5fda90b42ce634f6759bd529a033ce 330 SMART SM00062 40 263 6.3E-22 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS06410 6a5fda90b42ce634f6759bd529a033ce 330 Pfam PF09084 NMT1/THI5 like 67 259 1.2E-17 T 22-04-2016 IPR015168 SsuA/THI5-like RPIC12D_RS06410 6a5fda90b42ce634f6759bd529a033ce 330 PANTHER PTHR30024 1 322 2.2E-120 T 22-04-2016 RPIC12D_RS06410 6a5fda90b42ce634f6759bd529a033ce 330 PANTHER PTHR30024:SF11 1 322 2.2E-120 T 22-04-2016 RPIC12D_RS06410 6a5fda90b42ce634f6759bd529a033ce 330 SUPERFAMILY SSF53850 39 275 1.26E-52 T 22-04-2016 RPIC12D_RS06410 6a5fda90b42ce634f6759bd529a033ce 330 Gene3D G3DSA:3.40.190.10 122 244 1.7E-30 T 22-04-2016 RPIC12D_RS03245 15b3ef41c3a6f205a8114b627f17e7b5 119 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 119 4.5E-49 T 22-04-2016 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 RPIC12D_RS07215 69295b3bbf9f64e2be1ad36926422a55 69 Pfam PF07866 Protein of unknown function (DUF1653) 8 66 1.0E-18 T 22-04-2016 IPR023387 DUF1653-like domain RPIC12D_RS07215 69295b3bbf9f64e2be1ad36926422a55 69 Gene3D G3DSA:2.30.30.320 4 68 2.3E-17 T 22-04-2016 IPR023387 DUF1653-like domain RPIC12D_RS15905 ebaf6f3bad246ef49de666e4e9d359a8 765 Hamap MF_00983 Probable primosomal protein N' [priA]. 22 765 23.531 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RPIC12D_RS15905 ebaf6f3bad246ef49de666e4e9d359a8 765 SUPERFAMILY SSF52540 195 393 4.44E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15905 ebaf6f3bad246ef49de666e4e9d359a8 765 SMART SM00487 215 418 4.3E-16 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC12D_RS15905 ebaf6f3bad246ef49de666e4e9d359a8 765 PANTHER PTHR30580 10 765 8.6E-220 T 22-04-2016 RPIC12D_RS15905 ebaf6f3bad246ef49de666e4e9d359a8 765 Pfam PF00271 Helicase conserved C-terminal domain 525 620 1.7E-7 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS15905 ebaf6f3bad246ef49de666e4e9d359a8 765 Gene3D G3DSA:3.40.50.300 218 392 7.7E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15905 ebaf6f3bad246ef49de666e4e9d359a8 765 SUPERFAMILY SSF52540 242 292 6.74E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15905 ebaf6f3bad246ef49de666e4e9d359a8 765 SUPERFAMILY SSF52540 535 648 6.74E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15905 ebaf6f3bad246ef49de666e4e9d359a8 765 TIGRFAM TIGR00595 priA: primosomal protein N' 243 763 1.7E-169 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RPIC12D_RS15905 ebaf6f3bad246ef49de666e4e9d359a8 765 Gene3D G3DSA:3.40.50.300 524 664 2.7E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15905 ebaf6f3bad246ef49de666e4e9d359a8 765 Gene3D G3DSA:3.40.50.300 437 459 2.7E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15905 ebaf6f3bad246ef49de666e4e9d359a8 765 Pfam PF00270 DEAD/DEAH box helicase 223 385 8.2E-11 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIC12D_RS15905 ebaf6f3bad246ef49de666e4e9d359a8 765 SMART SM00490 523 620 1.0E-8 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 SUPERFAMILY SSF47384 426 499 7.46E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 PANTHER PTHR24423 125 223 6.4E-83 T 22-04-2016 RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 PANTHER PTHR24423 413 661 6.4E-83 T 22-04-2016 RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 592 606 4.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 623 641 4.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 620 4.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 660 4.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 Gene3D G3DSA:1.10.287.130 433 488 7.5E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 Gene3D G3DSA:3.30.450.20 125 220 1.8E-7 T 22-04-2016 RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 SMART SM00388 436 504 3.7E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 SUPERFAMILY SSF55874 492 659 1.83E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 Gene3D G3DSA:3.30.565.10 489 660 1.4E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 SUPERFAMILY SSF103190 94 222 7.85E-12 T 22-04-2016 IPR029151 Periplasmic sensor domain-like RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 Pfam PF00512 His Kinase A (phospho-acceptor) domain 436 498 3.8E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 PANTHER PTHR24423:SF451 125 223 6.4E-83 T 22-04-2016 RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 PANTHER PTHR24423:SF451 413 661 6.4E-83 T 22-04-2016 RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 Pfam PF02743 Cache domain 77 313 1.3E-22 T 22-04-2016 IPR033479 Double Cache domain 1 RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 547 660 1.9E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 SMART SM00387 546 663 7.9E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS00955 a0b6554915738f23904d8e1f4dbe0a80 670 PIRSF PIRSF036431 34 670 3.8E-238 T 22-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) RPIC12D_RS01715 efbd9ab400eae3ae8876cdb6d97bf5ee 150 Pfam PF01230 HIT domain 28 107 6.0E-13 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RPIC12D_RS01715 efbd9ab400eae3ae8876cdb6d97bf5ee 150 Gene3D G3DSA:3.30.428.10 7 136 8.6E-40 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 RPIC12D_RS01715 efbd9ab400eae3ae8876cdb6d97bf5ee 150 SUPERFAMILY SSF54197 11 130 2.94E-36 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 RPIC12D_RS01715 efbd9ab400eae3ae8876cdb6d97bf5ee 150 PIRSF PIRSF000714 10 148 4.2E-40 T 22-04-2016 IPR026026 Histidine triad hydrolase, Hint-type RPIC12D_RS01715 efbd9ab400eae3ae8876cdb6d97bf5ee 150 PANTHER PTHR23089 30 136 2.5E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RPIC12D_RS01715 efbd9ab400eae3ae8876cdb6d97bf5ee 150 PANTHER PTHR23089:SF13 30 136 2.5E-18 T 22-04-2016 RPIC12D_RS14985 c716f2dc8daf793b3890042b073e0aa0 581 PIRSF PIRSF035859 1 580 6.7E-299 T 22-04-2016 IPR014597 ABC transporter, periplasmic substrate-binding protein GO:0005215 RPIC12D_RS14985 c716f2dc8daf793b3890042b073e0aa0 581 Gene3D G3DSA:3.40.190.10 204 449 9.6E-42 T 22-04-2016 RPIC12D_RS14985 c716f2dc8daf793b3890042b073e0aa0 581 Gene3D G3DSA:3.40.190.10 87 203 1.9E-15 T 22-04-2016 RPIC12D_RS14985 c716f2dc8daf793b3890042b073e0aa0 581 SUPERFAMILY SSF53850 68 522 4.35E-63 T 22-04-2016 RPIC12D_RS14985 c716f2dc8daf793b3890042b073e0aa0 581 PANTHER PTHR30061 89 542 3.0E-20 T 22-04-2016 RPIC12D_RS14985 c716f2dc8daf793b3890042b073e0aa0 581 Pfam PF13416 Bacterial extracellular solute-binding protein 89 444 1.4E-10 T 22-04-2016 RPIC12D_RS05645 ab4421bdb21efd6428b8dedf0d66b173 457 Pfam PF02954 Bacterial regulatory protein, Fis family 409 446 9.5E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS05645 ab4421bdb21efd6428b8dedf0d66b173 457 PANTHER PTHR32071 35 451 1.1E-138 T 22-04-2016 RPIC12D_RS05645 ab4421bdb21efd6428b8dedf0d66b173 457 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RPIC12D_RS05645 ab4421bdb21efd6428b8dedf0d66b173 457 PANTHER PTHR32071:SF34 35 451 1.1E-138 T 22-04-2016 RPIC12D_RS05645 ab4421bdb21efd6428b8dedf0d66b173 457 Gene3D G3DSA:3.40.50.300 145 320 1.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05645 ab4421bdb21efd6428b8dedf0d66b173 457 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RPIC12D_RS05645 ab4421bdb21efd6428b8dedf0d66b173 457 Gene3D G3DSA:1.10.10.60 405 448 5.4E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS05645 ab4421bdb21efd6428b8dedf0d66b173 457 SUPERFAMILY SSF46689 361 448 7.89E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS05645 ab4421bdb21efd6428b8dedf0d66b173 457 SMART SM00382 168 311 1.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS05645 ab4421bdb21efd6428b8dedf0d66b173 457 Pfam PF00158 Sigma-54 interaction domain 149 314 5.2E-65 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RPIC12D_RS05645 ab4421bdb21efd6428b8dedf0d66b173 457 Gene3D G3DSA:1.10.8.60 321 391 5.8E-23 T 22-04-2016 RPIC12D_RS05645 ab4421bdb21efd6428b8dedf0d66b173 457 SUPERFAMILY SSF52540 149 389 2.3E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12120 8faba251699c7d01464e5fd1c0c7bd92 161 Gene3D G3DSA:3.30.70.990 9 94 2.5E-32 T 22-04-2016 RPIC12D_RS12120 8faba251699c7d01464e5fd1c0c7bd92 161 Gene3D G3DSA:3.30.70.860 95 161 3.8E-33 T 22-04-2016 RPIC12D_RS12120 8faba251699c7d01464e5fd1c0c7bd92 161 PANTHER PTHR30476:SF0 1 161 1.7E-72 T 22-04-2016 RPIC12D_RS12120 8faba251699c7d01464e5fd1c0c7bd92 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 28.694 T 22-04-2016 IPR007551 Protein of unknown function DUF520 RPIC12D_RS12120 8faba251699c7d01464e5fd1c0c7bd92 161 PANTHER PTHR30476 1 161 1.7E-72 T 22-04-2016 RPIC12D_RS12120 8faba251699c7d01464e5fd1c0c7bd92 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 1.8E-66 T 22-04-2016 IPR007551 Protein of unknown function DUF520 RPIC12D_RS12120 8faba251699c7d01464e5fd1c0c7bd92 161 SUPERFAMILY SSF89963 2 87 2.25E-31 T 22-04-2016 IPR007551 Protein of unknown function DUF520 RPIC12D_RS12120 8faba251699c7d01464e5fd1c0c7bd92 161 SUPERFAMILY SSF89963 89 161 4.58E-28 T 22-04-2016 IPR007551 Protein of unknown function DUF520 RPIC12D_RS11955 882fd9b29e381e0d71eb03db75ffce72 192 PANTHER PTHR37943:SF1 1 116 2.2E-34 T 22-04-2016 RPIC12D_RS11955 882fd9b29e381e0d71eb03db75ffce72 192 Gene3D G3DSA:2.60.120.10 8 114 2.4E-35 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS11955 882fd9b29e381e0d71eb03db75ffce72 192 SUPERFAMILY SSF51182 1 171 3.69E-47 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS11955 882fd9b29e381e0d71eb03db75ffce72 192 Pfam PF05962 HutD 8 169 3.5E-48 T 22-04-2016 IPR010282 Uncharacterised protein family HutD/Ves RPIC12D_RS11955 882fd9b29e381e0d71eb03db75ffce72 192 PANTHER PTHR37943 1 116 2.2E-34 T 22-04-2016 RPIC12D_RS05655 d8ae8c560f2400d27f8138bdd4a3c060 108 PIRSF PIRSF000077 2 108 1.1E-44 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC12D_RS05655 d8ae8c560f2400d27f8138bdd4a3c060 108 Gene3D G3DSA:3.40.30.10 2 108 3.9E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS05655 d8ae8c560f2400d27f8138bdd4a3c060 108 SUPERFAMILY SSF52833 3 108 2.31E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS05655 d8ae8c560f2400d27f8138bdd4a3c060 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.1E-40 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC12D_RS05655 d8ae8c560f2400d27f8138bdd4a3c060 108 PRINTS PR00421 Thioredoxin family signature 24 32 4.4E-10 T 22-04-2016 RPIC12D_RS05655 d8ae8c560f2400d27f8138bdd4a3c060 108 PRINTS PR00421 Thioredoxin family signature 72 83 4.4E-10 T 22-04-2016 RPIC12D_RS05655 d8ae8c560f2400d27f8138bdd4a3c060 108 PRINTS PR00421 Thioredoxin family signature 32 41 4.4E-10 T 22-04-2016 RPIC12D_RS05655 d8ae8c560f2400d27f8138bdd4a3c060 108 Pfam PF00085 Thioredoxin 5 107 1.6E-35 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RPIC12D_RS05655 d8ae8c560f2400d27f8138bdd4a3c060 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RPIC12D_RS05655 d8ae8c560f2400d27f8138bdd4a3c060 108 PANTHER PTHR10438 4 108 7.3E-42 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC12D_RS10900 ce47231fa68c61b8e7fa4151dbdc6361 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 32 56 4.2E-5 T 22-04-2016 RPIC12D_RS10900 ce47231fa68c61b8e7fa4151dbdc6361 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 154 178 4.2E-5 T 22-04-2016 RPIC12D_RS10900 ce47231fa68c61b8e7fa4151dbdc6361 475 PANTHER PTHR23501 21 464 6.2E-111 T 22-04-2016 RPIC12D_RS10900 ce47231fa68c61b8e7fa4151dbdc6361 475 Pfam PF07690 Major Facilitator Superfamily 35 426 6.0E-49 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS10900 ce47231fa68c61b8e7fa4151dbdc6361 475 SUPERFAMILY SSF103473 15 213 3.92E-69 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS10900 ce47231fa68c61b8e7fa4151dbdc6361 475 SUPERFAMILY SSF103473 264 467 3.92E-69 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS10900 ce47231fa68c61b8e7fa4151dbdc6361 475 Gene3D G3DSA:1.20.1250.20 26 213 6.9E-30 T 22-04-2016 RPIC12D_RS10900 ce47231fa68c61b8e7fa4151dbdc6361 475 Gene3D G3DSA:1.20.1250.20 281 467 1.1E-18 T 22-04-2016 RPIC12D_RS10050 35f2c098251712e065bf4b159067972a 156 SUPERFAMILY SSF75217 1 154 8.72E-50 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RPIC12D_RS10050 35f2c098251712e065bf4b159067972a 156 PANTHER PTHR33603 1 155 1.4E-55 T 22-04-2016 RPIC12D_RS10050 35f2c098251712e065bf4b159067972a 156 PANTHER PTHR33603:SF1 1 155 1.4E-55 T 22-04-2016 RPIC12D_RS10050 35f2c098251712e065bf4b159067972a 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.665 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS10050 35f2c098251712e065bf4b159067972a 156 Gene3D G3DSA:3.40.1280.10 1 155 2.2E-55 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIC12D_RS10050 35f2c098251712e065bf4b159067972a 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.6E-50 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS10050 35f2c098251712e065bf4b159067972a 156 PIRSF PIRSF004505 1 155 5.3E-47 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS03760 9a1d44ede8b817267231f043766d6da7 226 Pfam PF08281 Sigma-70, region 4 162 212 7.0E-9 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS03760 9a1d44ede8b817267231f043766d6da7 226 Gene3D G3DSA:1.10.10.10 157 214 1.2E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS03760 9a1d44ede8b817267231f043766d6da7 226 SUPERFAMILY SSF88659 157 216 1.67E-8 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS04680 56adc98364d377788edd2a0add6ed329 276 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 124 135 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC12D_RS04680 56adc98364d377788edd2a0add6ed329 276 Pfam PF04060 Putative Fe-S cluster 20 52 2.0E-13 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 RPIC12D_RS04680 56adc98364d377788edd2a0add6ed329 276 Pfam PF14697 4Fe-4S dicluster domain 87 141 7.1E-18 T 22-04-2016 RPIC12D_RS04680 56adc98364d377788edd2a0add6ed329 276 PANTHER PTHR11938 11 152 8.6E-51 T 22-04-2016 RPIC12D_RS04680 56adc98364d377788edd2a0add6ed329 276 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 9 158 2.2E-69 T 22-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 RPIC12D_RS04680 56adc98364d377788edd2a0add6ed329 276 SUPERFAMILY SSF54862 15 148 7.54E-31 T 22-04-2016 RPIC12D_RS04680 56adc98364d377788edd2a0add6ed329 276 PANTHER PTHR11938:SF64 11 152 8.6E-51 T 22-04-2016 RPIC12D_RS04680 56adc98364d377788edd2a0add6ed329 276 Gene3D G3DSA:3.30.70.20 23 99 2.0E-6 T 22-04-2016 RPIC12D_RS04680 56adc98364d377788edd2a0add6ed329 276 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 94 105 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC12D_RS04680 56adc98364d377788edd2a0add6ed329 276 Gene3D G3DSA:3.30.70.20 100 147 7.7E-16 T 22-04-2016 RPIC12D_RS21545 e0018a7ca8bf16d883414df922a50590 302 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 159 167 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RPIC12D_RS21545 e0018a7ca8bf16d883414df922a50590 302 Pfam PF00271 Helicase conserved C-terminal domain 241 301 2.1E-4 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS21545 e0018a7ca8bf16d883414df922a50590 302 Gene3D G3DSA:3.40.50.300 217 301 8.7E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS21545 e0018a7ca8bf16d883414df922a50590 302 SUPERFAMILY SSF52540 222 301 5.32E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS21545 e0018a7ca8bf16d883414df922a50590 302 SMART SM00487 7 228 7.7E-58 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC12D_RS21545 e0018a7ca8bf16d883414df922a50590 302 PANTHER PTHR24031:SF261 79 302 8.2E-118 T 22-04-2016 RPIC12D_RS21545 e0018a7ca8bf16d883414df922a50590 302 PANTHER PTHR24031:SF261 1 55 8.2E-118 T 22-04-2016 RPIC12D_RS21545 e0018a7ca8bf16d883414df922a50590 302 SUPERFAMILY SSF52540 2 214 6.95E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS21545 e0018a7ca8bf16d883414df922a50590 302 Pfam PF00270 DEAD/DEAH box helicase 12 201 8.9E-48 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIC12D_RS21545 e0018a7ca8bf16d883414df922a50590 302 Gene3D G3DSA:3.40.50.300 1 216 2.5E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS21545 e0018a7ca8bf16d883414df922a50590 302 PANTHER PTHR24031 79 302 8.2E-118 T 22-04-2016 RPIC12D_RS21545 e0018a7ca8bf16d883414df922a50590 302 PANTHER PTHR24031 1 55 8.2E-118 T 22-04-2016 RPIC12D_RS10835 1fc62da8c063a2e47dc07402e6f0abc8 112 SUPERFAMILY SSF54913 1 112 7.63E-47 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RPIC12D_RS10835 1fc62da8c063a2e47dc07402e6f0abc8 112 PRINTS PR00340 P-II protein signature 52 75 3.8E-45 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC12D_RS10835 1fc62da8c063a2e47dc07402e6f0abc8 112 PRINTS PR00340 P-II protein signature 23 41 3.8E-45 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC12D_RS10835 1fc62da8c063a2e47dc07402e6f0abc8 112 PRINTS PR00340 P-II protein signature 83 103 3.8E-45 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC12D_RS10835 1fc62da8c063a2e47dc07402e6f0abc8 112 PRINTS PR00340 P-II protein signature 2 17 3.8E-45 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC12D_RS10835 1fc62da8c063a2e47dc07402e6f0abc8 112 Gene3D G3DSA:3.30.70.120 1 112 3.1E-51 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RPIC12D_RS10835 1fc62da8c063a2e47dc07402e6f0abc8 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 RPIC12D_RS10835 1fc62da8c063a2e47dc07402e6f0abc8 112 PANTHER PTHR30115:SF12 1 112 2.3E-68 T 22-04-2016 RPIC12D_RS10835 1fc62da8c063a2e47dc07402e6f0abc8 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 RPIC12D_RS10835 1fc62da8c063a2e47dc07402e6f0abc8 112 PANTHER PTHR30115 1 112 2.3E-68 T 22-04-2016 RPIC12D_RS10835 1fc62da8c063a2e47dc07402e6f0abc8 112 SMART SM00938 4 105 3.6E-68 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC12D_RS10835 1fc62da8c063a2e47dc07402e6f0abc8 112 PIRSF PIRSF039144 1 112 1.5E-56 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC12D_RS10835 1fc62da8c063a2e47dc07402e6f0abc8 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.3E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC12D_RS12160 cf39a50f215182fcb88bb09dbb54435b 281 Gene3D G3DSA:1.25.40.10 193 264 1.5E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS12160 cf39a50f215182fcb88bb09dbb54435b 281 Pfam PF13369 Transglutaminase-like superfamily 42 197 1.7E-47 T 22-04-2016 IPR032698 Protein SirB1, N-terminal RPIC12D_RS12160 cf39a50f215182fcb88bb09dbb54435b 281 PANTHER PTHR31350:SF1 15 259 3.8E-39 T 22-04-2016 RPIC12D_RS12160 cf39a50f215182fcb88bb09dbb54435b 281 PANTHER PTHR31350 15 259 3.8E-39 T 22-04-2016 RPIC12D_RS12160 cf39a50f215182fcb88bb09dbb54435b 281 Pfam PF13371 Tetratricopeptide repeat 199 270 6.1E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS07020 2a03c3c3db6130e20ede0c49e8b6a003 212 SUPERFAMILY SSF69118 29 208 7.36E-28 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS07020 2a03c3c3db6130e20ede0c49e8b6a003 212 PANTHER PTHR34846:SF1 21 200 5.2E-45 T 22-04-2016 RPIC12D_RS07020 2a03c3c3db6130e20ede0c49e8b6a003 212 PANTHER PTHR34846 21 200 5.2E-45 T 22-04-2016 RPIC12D_RS07020 2a03c3c3db6130e20ede0c49e8b6a003 212 Gene3D G3DSA:1.20.1290.10 61 199 1.9E-22 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS16755 60bd6ff1a49d14d90a00a13d82b26e32 428 Hamap MF_01261 Multifunctional CCA protein [cca]. 19 428 50.524 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 RPIC12D_RS16755 60bd6ff1a49d14d90a00a13d82b26e32 428 SUPERFAMILY SSF81301 16 143 1.42E-28 T 22-04-2016 RPIC12D_RS16755 60bd6ff1a49d14d90a00a13d82b26e32 428 SMART SM00471 246 360 0.0054 T 22-04-2016 IPR003607 HD/PDEase domain RPIC12D_RS16755 60bd6ff1a49d14d90a00a13d82b26e32 428 Gene3D G3DSA:1.10.3090.10 146 382 5.8E-51 T 22-04-2016 RPIC12D_RS16755 60bd6ff1a49d14d90a00a13d82b26e32 428 Pfam PF01966 HD domain 253 332 1.5E-8 T 22-04-2016 IPR006674 HD domain RPIC12D_RS16755 60bd6ff1a49d14d90a00a13d82b26e32 428 Pfam PF01743 Poly A polymerase head domain 21 145 2.7E-15 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 RPIC12D_RS16755 60bd6ff1a49d14d90a00a13d82b26e32 428 SUPERFAMILY SSF81891 146 381 1.96E-49 T 22-04-2016 RPIC12D_RS16755 60bd6ff1a49d14d90a00a13d82b26e32 428 PIRSF PIRSF000813 19 428 8.6E-196 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 RPIC12D_RS16755 60bd6ff1a49d14d90a00a13d82b26e32 428 PANTHER PTHR13734 17 289 1.2E-61 T 22-04-2016 RPIC12D_RS16755 60bd6ff1a49d14d90a00a13d82b26e32 428 Gene3D G3DSA:3.30.460.10 15 145 5.4E-29 T 22-04-2016 RPIC12D_RS16755 60bd6ff1a49d14d90a00a13d82b26e32 428 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 171 233 9.3E-10 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RPIC12D_RS09275 bf1fd8c260cc343ee9f7480b02f3ad7b 217 PANTHER PTHR11260 1 201 2.1E-26 T 22-04-2016 RPIC12D_RS09275 bf1fd8c260cc343ee9f7480b02f3ad7b 217 Gene3D G3DSA:1.20.1050.10 87 211 3.5E-34 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS09275 bf1fd8c260cc343ee9f7480b02f3ad7b 217 Pfam PF13410 Glutathione S-transferase, C-terminal domain 123 186 5.2E-7 T 22-04-2016 RPIC12D_RS09275 bf1fd8c260cc343ee9f7480b02f3ad7b 217 Gene3D G3DSA:3.40.30.10 1 86 3.2E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS09275 bf1fd8c260cc343ee9f7480b02f3ad7b 217 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 74 6.0E-18 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC12D_RS09275 bf1fd8c260cc343ee9f7480b02f3ad7b 217 SUPERFAMILY SSF47616 72 204 1.99E-18 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS09275 bf1fd8c260cc343ee9f7480b02f3ad7b 217 SUPERFAMILY SSF52833 1 95 1.08E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS09275 bf1fd8c260cc343ee9f7480b02f3ad7b 217 PANTHER PTHR11260:SF285 1 201 2.1E-26 T 22-04-2016 RPIC12D_RS15035 530b094f83bffeda3056fe871c93a6e1 306 Gene3D G3DSA:3.40.50.1820 16 304 4.4E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS15035 530b094f83bffeda3056fe871c93a6e1 306 PANTHER PTHR11614:SF82 39 302 3.3E-19 T 22-04-2016 RPIC12D_RS15035 530b094f83bffeda3056fe871c93a6e1 306 PIRSF PIRSF037442 7 306 3.5E-57 T 22-04-2016 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 RPIC12D_RS15035 530b094f83bffeda3056fe871c93a6e1 306 SUPERFAMILY SSF53474 20 172 3.02E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS15035 530b094f83bffeda3056fe871c93a6e1 306 SUPERFAMILY SSF53474 207 305 3.02E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS15035 530b094f83bffeda3056fe871c93a6e1 306 PANTHER PTHR11614 39 302 3.3E-19 T 22-04-2016 RPIC12D_RS15035 530b094f83bffeda3056fe871c93a6e1 306 Pfam PF12697 Alpha/beta hydrolase family 40 287 5.6E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS04145 e473cd43f735e9fa6695c9bec303b5fd 248 PANTHER PTHR30251:SF2 10 238 1.5E-65 T 22-04-2016 RPIC12D_RS04145 e473cd43f735e9fa6695c9bec303b5fd 248 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 25 139 1.5E-37 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 RPIC12D_RS04145 e473cd43f735e9fa6695c9bec303b5fd 248 SUPERFAMILY SSF49354 19 139 1.13E-36 T 22-04-2016 IPR008962 PapD-like RPIC12D_RS04145 e473cd43f735e9fa6695c9bec303b5fd 248 Gene3D G3DSA:2.60.40.1070 142 238 4.8E-17 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal RPIC12D_RS04145 e473cd43f735e9fa6695c9bec303b5fd 248 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 166 229 6.3E-15 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal RPIC12D_RS04145 e473cd43f735e9fa6695c9bec303b5fd 248 Gene3D G3DSA:2.60.40.360 24 140 5.5E-41 T 22-04-2016 IPR008962 PapD-like RPIC12D_RS04145 e473cd43f735e9fa6695c9bec303b5fd 248 PANTHER PTHR30251 10 238 1.5E-65 T 22-04-2016 RPIC12D_RS04145 e473cd43f735e9fa6695c9bec303b5fd 248 SUPERFAMILY SSF49584 144 238 8.5E-17 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal RPIC12D_RS04145 e473cd43f735e9fa6695c9bec303b5fd 248 PRINTS PR00969 Pili chaperone signature 160 175 8.2E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RPIC12D_RS04145 e473cd43f735e9fa6695c9bec303b5fd 248 PRINTS PR00969 Pili chaperone signature 70 91 8.2E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RPIC12D_RS04145 e473cd43f735e9fa6695c9bec303b5fd 248 PRINTS PR00969 Pili chaperone signature 98 115 8.2E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RPIC12D_RS04145 e473cd43f735e9fa6695c9bec303b5fd 248 PRINTS PR00969 Pili chaperone signature 25 34 8.2E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RPIC12D_RS04145 e473cd43f735e9fa6695c9bec303b5fd 248 PRINTS PR00969 Pili chaperone signature 121 136 8.2E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RPIC12D_RS01230 c5d13d6b55acad2fdb9205ee2e755be4 309 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 21 307 51.074 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 RPIC12D_RS01230 c5d13d6b55acad2fdb9205ee2e755be4 309 Pfam PF04545 Sigma-70, region 4 247 302 2.0E-14 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01230 c5d13d6b55acad2fdb9205ee2e755be4 309 Pfam PF00140 Sigma-70 factor, region 1.2 36 65 3.3E-7 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01230 c5d13d6b55acad2fdb9205ee2e755be4 309 SUPERFAMILY SSF88946 35 142 3.92E-42 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01230 c5d13d6b55acad2fdb9205ee2e755be4 309 Pfam PF04542 Sigma-70 region 2 73 142 7.3E-19 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01230 c5d13d6b55acad2fdb9205ee2e755be4 309 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 97 110 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01230 c5d13d6b55acad2fdb9205ee2e755be4 309 Gene3D G3DSA:1.10.10.10 242 305 4.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS01230 c5d13d6b55acad2fdb9205ee2e755be4 309 Gene3D G3DSA:1.10.601.10 35 142 1.0E-39 T 22-04-2016 RPIC12D_RS01230 c5d13d6b55acad2fdb9205ee2e755be4 309 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 68 304 4.0E-32 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01230 c5d13d6b55acad2fdb9205ee2e755be4 309 SUPERFAMILY SSF88659 210 306 2.43E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01230 c5d13d6b55acad2fdb9205ee2e755be4 309 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 275 301 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01230 c5d13d6b55acad2fdb9205ee2e755be4 309 PANTHER PTHR30376 22 305 4.4E-104 T 22-04-2016 RPIC12D_RS01230 c5d13d6b55acad2fdb9205ee2e755be4 309 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 34 306 3.8E-124 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 RPIC12D_RS01230 c5d13d6b55acad2fdb9205ee2e755be4 309 PRINTS PR00046 Major sigma-70 factor signature 121 129 2.2E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01230 c5d13d6b55acad2fdb9205ee2e755be4 309 PRINTS PR00046 Major sigma-70 factor signature 290 301 2.2E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01230 c5d13d6b55acad2fdb9205ee2e755be4 309 PRINTS PR00046 Major sigma-70 factor signature 97 110 2.2E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01230 c5d13d6b55acad2fdb9205ee2e755be4 309 PRINTS PR00046 Major sigma-70 factor signature 275 290 2.2E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01525 c17360004635d6d851807b0d63172f40 242 Pfam PF00072 Response regulator receiver domain 7 116 4.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS01525 c17360004635d6d851807b0d63172f40 242 PANTHER PTHR26402:SF50 5 231 1.1E-92 T 22-04-2016 RPIC12D_RS01525 c17360004635d6d851807b0d63172f40 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 4.7E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS01525 c17360004635d6d851807b0d63172f40 242 SMART SM00862 155 231 7.5E-31 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS01525 c17360004635d6d851807b0d63172f40 242 SMART SM00448 5 116 1.4E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS01525 c17360004635d6d851807b0d63172f40 242 SUPERFAMILY SSF52172 4 129 1.85E-38 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS01525 c17360004635d6d851807b0d63172f40 242 Gene3D G3DSA:3.40.50.2300 3 124 6.9E-39 T 22-04-2016 RPIC12D_RS01525 c17360004635d6d851807b0d63172f40 242 PANTHER PTHR26402 5 231 1.1E-92 T 22-04-2016 RPIC12D_RS01525 c17360004635d6d851807b0d63172f40 242 SUPERFAMILY SSF46894 128 232 2.01E-32 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS01525 c17360004635d6d851807b0d63172f40 242 Gene3D G3DSA:1.10.10.10 134 232 6.4E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07645 a689573e32e5c26eb53adff5fe9c7733 308 Gene3D G3DSA:3.40.190.10 94 194 2.3E-25 T 22-04-2016 RPIC12D_RS07645 a689573e32e5c26eb53adff5fe9c7733 308 PANTHER PTHR30537 1 302 4.6E-150 T 22-04-2016 RPIC12D_RS07645 a689573e32e5c26eb53adff5fe9c7733 308 Gene3D G3DSA:1.10.10.10 6 88 9.5E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07645 a689573e32e5c26eb53adff5fe9c7733 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.9E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07645 a689573e32e5c26eb53adff5fe9c7733 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.9E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07645 a689573e32e5c26eb53adff5fe9c7733 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.9E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07645 a689573e32e5c26eb53adff5fe9c7733 308 PANTHER PTHR30537:SF11 1 302 4.6E-150 T 22-04-2016 RPIC12D_RS07645 a689573e32e5c26eb53adff5fe9c7733 308 Pfam PF03466 LysR substrate binding domain 90 296 8.6E-37 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS07645 a689573e32e5c26eb53adff5fe9c7733 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 7.3E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07645 a689573e32e5c26eb53adff5fe9c7733 308 SUPERFAMILY SSF46785 6 87 2.72E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07645 a689573e32e5c26eb53adff5fe9c7733 308 SUPERFAMILY SSF53850 92 300 1.76E-41 T 22-04-2016 RPIC12D_RS11450 2abab4eddcb33a2f02daaaae7bcb5dbe 455 SUPERFAMILY SSF48024 9 117 1.05E-31 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RPIC12D_RS11450 2abab4eddcb33a2f02daaaae7bcb5dbe 455 Gene3D G3DSA:3.40.50.300 175 435 1.9E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11450 2abab4eddcb33a2f02daaaae7bcb5dbe 455 PANTHER PTHR30153 10 443 1.0E-155 T 22-04-2016 RPIC12D_RS11450 2abab4eddcb33a2f02daaaae7bcb5dbe 455 Gene3D G3DSA:1.10.860.10 10 110 7.8E-33 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RPIC12D_RS11450 2abab4eddcb33a2f02daaaae7bcb5dbe 455 Pfam PF00772 DnaB-like helicase N terminal domain 10 109 5.4E-30 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RPIC12D_RS11450 2abab4eddcb33a2f02daaaae7bcb5dbe 455 SUPERFAMILY SSF52540 178 426 9.06E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11450 2abab4eddcb33a2f02daaaae7bcb5dbe 455 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 9 436 1.4E-141 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 RPIC12D_RS11450 2abab4eddcb33a2f02daaaae7bcb5dbe 455 Pfam PF03796 DnaB-like helicase C terminal domain 181 432 2.7E-93 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 RPIC12D_RS06805 87854c27f46e8a46ac378d5ec128657d 377 Pfam PF02684 Lipid-A-disaccharide synthetase 1 362 1.5E-96 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RPIC12D_RS06805 87854c27f46e8a46ac378d5ec128657d 377 Gene3D G3DSA:3.40.50.2000 153 305 4.8E-9 T 22-04-2016 RPIC12D_RS06805 87854c27f46e8a46ac378d5ec128657d 377 PANTHER PTHR30372 1 374 6.7E-95 T 22-04-2016 RPIC12D_RS06805 87854c27f46e8a46ac378d5ec128657d 377 SUPERFAMILY SSF53756 2 338 1.69E-29 T 22-04-2016 RPIC12D_RS06805 87854c27f46e8a46ac378d5ec128657d 377 PANTHER PTHR30372:SF0 1 374 6.7E-95 T 22-04-2016 RPIC12D_RS06805 87854c27f46e8a46ac378d5ec128657d 377 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 1 372 34.901 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RPIC12D_RS06805 87854c27f46e8a46ac378d5ec128657d 377 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 368 2.8E-96 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RPIC12D_RS16165 76195ef74eafb331c22ba6471e5e2bf3 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.6E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS16165 76195ef74eafb331c22ba6471e5e2bf3 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.6E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS16165 76195ef74eafb331c22ba6471e5e2bf3 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.6E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS16165 76195ef74eafb331c22ba6471e5e2bf3 158 SUPERFAMILY SSF54909 64 153 1.61E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC12D_RS16165 76195ef74eafb331c22ba6471e5e2bf3 158 PANTHER PTHR30154:SF28 1 155 4.6E-53 T 22-04-2016 RPIC12D_RS16165 76195ef74eafb331c22ba6471e5e2bf3 158 Gene3D G3DSA:1.10.10.10 1 55 3.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16165 76195ef74eafb331c22ba6471e5e2bf3 158 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 4.2E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS16165 76195ef74eafb331c22ba6471e5e2bf3 158 PANTHER PTHR30154 1 155 4.6E-53 T 22-04-2016 RPIC12D_RS16165 76195ef74eafb331c22ba6471e5e2bf3 158 SUPERFAMILY SSF46785 2 92 1.11E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16165 76195ef74eafb331c22ba6471e5e2bf3 158 Pfam PF01037 Lrp/AsnC ligand binding domain 72 142 2.0E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC12D_RS16165 76195ef74eafb331c22ba6471e5e2bf3 158 Gene3D G3DSA:3.30.70.920 57 141 8.6E-28 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC12D_RS16165 76195ef74eafb331c22ba6471e5e2bf3 158 SMART SM00344 4 113 7.8E-37 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RPIC12D_RS10720 5b94f0d1d36734f30b273f55fde03df8 115 SUPERFAMILY SSF51182 1 81 4.32E-10 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS10720 5b94f0d1d36734f30b273f55fde03df8 115 Gene3D G3DSA:2.60.120.10 2 101 1.8E-28 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS09990 bc5c2a9300ed690694b75e5ea176bd01 326 PANTHER PTHR11695 18 326 4.8E-136 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RPIC12D_RS09990 bc5c2a9300ed690694b75e5ea176bd01 326 Gene3D G3DSA:3.90.180.10 3 148 1.8E-47 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS09990 bc5c2a9300ed690694b75e5ea176bd01 326 Pfam PF00107 Zinc-binding dehydrogenase 153 258 1.4E-29 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIC12D_RS09990 bc5c2a9300ed690694b75e5ea176bd01 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 88 5.6E-9 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIC12D_RS09990 bc5c2a9300ed690694b75e5ea176bd01 326 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 142 163 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 RPIC12D_RS09990 bc5c2a9300ed690694b75e5ea176bd01 326 Gene3D G3DSA:3.40.50.720 149 257 1.8E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS09990 bc5c2a9300ed690694b75e5ea176bd01 326 SMART SM00829 13 324 1.7E-41 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIC12D_RS09990 bc5c2a9300ed690694b75e5ea176bd01 326 SUPERFAMILY SSF50129 3 146 2.43E-39 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS09990 bc5c2a9300ed690694b75e5ea176bd01 326 SUPERFAMILY SSF51735 114 274 4.78E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS09990 bc5c2a9300ed690694b75e5ea176bd01 326 PANTHER PTHR11695:SF605 18 326 4.8E-136 T 22-04-2016 RPIC12D_RS12955 a8ac40ff76dd1cdbb4dbefd9e280abe1 334 PANTHER PTHR30036:SF1 31 307 1.0E-39 T 22-04-2016 RPIC12D_RS12955 a8ac40ff76dd1cdbb4dbefd9e280abe1 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 35 311 3.7E-45 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain RPIC12D_RS12955 a8ac40ff76dd1cdbb4dbefd9e280abe1 334 PANTHER PTHR30036 31 307 1.0E-39 T 22-04-2016 RPIC12D_RS12955 a8ac40ff76dd1cdbb4dbefd9e280abe1 334 Gene3D G3DSA:3.40.50.2300 33 155 1.1E-37 T 22-04-2016 RPIC12D_RS12955 a8ac40ff76dd1cdbb4dbefd9e280abe1 334 SUPERFAMILY SSF53822 33 331 1.45E-64 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS12955 a8ac40ff76dd1cdbb4dbefd9e280abe1 334 PIRSF PIRSF002816 1 334 6.3E-144 T 22-04-2016 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 RPIC12D_RS12955 a8ac40ff76dd1cdbb4dbefd9e280abe1 334 Gene3D G3DSA:3.40.50.2300 156 306 1.3E-47 T 22-04-2016 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 PANTHER PTHR11451:SF31 1 635 0.0 T 22-04-2016 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 Gene3D G3DSA:3.30.930.10 241 529 2.0E-121 T 22-04-2016 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 SUPERFAMILY SSF81271 2 61 1.14E-15 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 2.7E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 2.7E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 2.7E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 2.7E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 2.7E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 35.002 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 PANTHER PTHR11451 1 635 0.0 T 22-04-2016 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 SUPERFAMILY SSF55681 242 525 3.64E-99 T 22-04-2016 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 Gene3D G3DSA:3.30.54.20 130 186 1.4E-23 T 22-04-2016 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 Pfam PF03129 Anticodon binding domain 540 629 6.9E-22 T 22-04-2016 IPR004154 Anticodon-binding RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 Gene3D G3DSA:3.30.980.10 187 223 5.1E-43 T 22-04-2016 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 Gene3D G3DSA:3.30.980.10 66 129 5.1E-43 T 22-04-2016 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 Pfam PF02824 TGS domain 2 61 3.7E-10 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 SUPERFAMILY SSF55186 64 240 3.53E-68 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 630 3.3E-225 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 Gene3D G3DSA:3.40.50.800 530 634 4.0E-35 T 22-04-2016 IPR004154 Anticodon-binding RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 SMART SM00863 169 218 9.8E-24 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 528 9.1E-42 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 SUPERFAMILY SSF52954 528 633 2.57E-32 T 22-04-2016 IPR004154 Anticodon-binding RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 171 218 6.9E-14 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RPIC12D_RS08285 ab23f9b943578e5fcd422d44fa686979 635 Gene3D G3DSA:3.10.20.30 1 64 1.0E-22 T 22-04-2016 IPR012675 Beta-grasp domain RPIC12D_RS05760 9e89437fd42c54c14b01149adf34fe38 450 SUPERFAMILY SSF50249 7 67 4.11E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS05760 9e89437fd42c54c14b01149adf34fe38 450 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 6 450 68.785 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 RPIC12D_RS05760 9e89437fd42c54c14b01149adf34fe38 450 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 267 448 3.4E-17 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 RPIC12D_RS05760 9e89437fd42c54c14b01149adf34fe38 450 PANTHER PTHR11061:SF30 7 450 9.7E-100 T 22-04-2016 RPIC12D_RS05760 9e89437fd42c54c14b01149adf34fe38 450 SUPERFAMILY SSF53335 70 449 3.52E-78 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS05760 9e89437fd42c54c14b01149adf34fe38 450 Gene3D G3DSA:2.40.50.140 6 81 9.6E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS05760 9e89437fd42c54c14b01149adf34fe38 450 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 432 442 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site RPIC12D_RS05760 9e89437fd42c54c14b01149adf34fe38 450 PANTHER PTHR11061 7 450 9.7E-100 T 22-04-2016 RPIC12D_RS05760 9e89437fd42c54c14b01149adf34fe38 450 Gene3D G3DSA:3.40.50.150 247 449 1.3E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 PANTHER PTHR10438:SF264 3 108 1.0E-37 T 22-04-2016 RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 PANTHER PTHR10438:SF264 210 231 1.0E-37 T 22-04-2016 RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 PRINTS PR00421 Thioredoxin family signature 70 81 8.99E-5 T 22-04-2016 RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 PRINTS PR00421 Thioredoxin family signature 30 39 8.99E-5 T 22-04-2016 RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 PRINTS PR00421 Thioredoxin family signature 22 30 8.99E-5 T 22-04-2016 RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 SMART SM00028 110 143 0.13 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 SMART SM00028 213 246 130.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 Pfam PF00085 Thioredoxin 4 104 3.7E-26 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 Pfam PF14559 Tetratricopeptide repeat 122 184 1.0E-6 T 22-04-2016 RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 SUPERFAMILY SSF52833 3 108 1.68E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 Pfam PF14561 Tetratricopeptide repeat 194 280 1.1E-23 T 22-04-2016 RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 PANTHER PTHR10438 3 108 1.0E-37 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 PANTHER PTHR10438 210 231 1.0E-37 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 Gene3D G3DSA:1.25.40.10 196 280 1.2E-27 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 SUPERFAMILY SSF48452 194 271 3.13E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 SUPERFAMILY SSF48452 114 167 3.13E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 Gene3D G3DSA:3.40.30.10 3 105 7.9E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 TIGRFAM TIGR01068 thioredoxin: thioredoxin 5 104 3.0E-31 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC12D_RS03965 6ee76de4185e63ae1f4027b03578e975 281 Gene3D G3DSA:1.25.40.10 106 189 1.1E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS15940 3476d03642cac74dcb68e8ef2456ccd3 353 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 24 327 1.9E-90 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RPIC12D_RS15940 3476d03642cac74dcb68e8ef2456ccd3 353 Gene3D G3DSA:3.40.190.10 100 276 1.1E-59 T 22-04-2016 RPIC12D_RS15940 3476d03642cac74dcb68e8ef2456ccd3 353 PANTHER PTHR30570:SF0 1 335 9.1E-91 T 22-04-2016 RPIC12D_RS15940 3476d03642cac74dcb68e8ef2456ccd3 353 Pfam PF12849 PBP superfamily domain 21 302 1.3E-48 T 22-04-2016 IPR024370 PBP domain RPIC12D_RS15940 3476d03642cac74dcb68e8ef2456ccd3 353 SUPERFAMILY SSF53850 24 335 2.57E-84 T 22-04-2016 RPIC12D_RS15940 3476d03642cac74dcb68e8ef2456ccd3 353 PANTHER PTHR30570 1 335 9.1E-91 T 22-04-2016 RPIC12D_RS15940 3476d03642cac74dcb68e8ef2456ccd3 353 PIRSF PIRSF002756 9 336 1.7E-82 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RPIC12D_RS06530 ce6de5105dd1528fb00cc97774925fe8 309 SUPERFAMILY SSF46785 3 111 3.27E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06530 ce6de5105dd1528fb00cc97774925fe8 309 Gene3D G3DSA:1.10.10.10 4 84 5.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06530 ce6de5105dd1528fb00cc97774925fe8 309 Gene3D G3DSA:3.40.190.10 177 259 7.0E-21 T 22-04-2016 RPIC12D_RS06530 ce6de5105dd1528fb00cc97774925fe8 309 PANTHER PTHR30537 1 308 3.1E-113 T 22-04-2016 RPIC12D_RS06530 ce6de5105dd1528fb00cc97774925fe8 309 SUPERFAMILY SSF53850 91 296 6.52E-49 T 22-04-2016 RPIC12D_RS06530 ce6de5105dd1528fb00cc97774925fe8 309 Gene3D G3DSA:3.40.190.10 92 176 1.4E-25 T 22-04-2016 RPIC12D_RS06530 ce6de5105dd1528fb00cc97774925fe8 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.9E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06530 ce6de5105dd1528fb00cc97774925fe8 309 Pfam PF03466 LysR substrate binding domain 90 291 4.6E-47 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS06530 ce6de5105dd1528fb00cc97774925fe8 309 PANTHER PTHR30537:SF5 1 308 3.1E-113 T 22-04-2016 RPIC12D_RS04440 1fe01c93e2bd47c62f7549a4fb9f9fe9 333 Gene3D G3DSA:3.40.50.1100 82 326 6.9E-49 T 22-04-2016 RPIC12D_RS04440 1fe01c93e2bd47c62f7549a4fb9f9fe9 333 PANTHER PTHR10314:SF17 20 326 2.0E-80 T 22-04-2016 RPIC12D_RS04440 1fe01c93e2bd47c62f7549a4fb9f9fe9 333 SUPERFAMILY SSF53686 16 320 1.23E-70 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC12D_RS04440 1fe01c93e2bd47c62f7549a4fb9f9fe9 333 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 32 314 3.7E-60 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC12D_RS04440 1fe01c93e2bd47c62f7549a4fb9f9fe9 333 PANTHER PTHR10314 20 326 2.0E-80 T 22-04-2016 RPIC12D_RS16735 fe8c7931167cd4af75308cb51594c825 197 PIRSF PIRSF006806 11 196 1.0E-30 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RPIC12D_RS16735 fe8c7931167cd4af75308cb51594c825 197 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 17 193 3.0E-28 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RPIC12D_RS16735 fe8c7931167cd4af75308cb51594c825 197 Gene3D G3DSA:3.40.50.10420 16 196 2.4E-45 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RPIC12D_RS16735 fe8c7931167cd4af75308cb51594c825 197 PANTHER PTHR23407:SF1 7 196 1.9E-39 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RPIC12D_RS16735 fe8c7931167cd4af75308cb51594c825 197 SUPERFAMILY SSF100950 15 197 2.79E-44 T 22-04-2016 RPIC12D_RS16735 fe8c7931167cd4af75308cb51594c825 197 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 17 193 2.2E-37 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RPIC12D_RS16735 fe8c7931167cd4af75308cb51594c825 197 PANTHER PTHR23407 7 196 1.9E-39 T 22-04-2016 RPIC12D_RS06105 55dc17f558a90fbd2a9f875a5bb5e979 429 Gene3D G3DSA:2.40.50.100 228 261 4.6E-14 T 22-04-2016 RPIC12D_RS06105 55dc17f558a90fbd2a9f875a5bb5e979 429 Gene3D G3DSA:2.40.50.100 74 107 4.6E-14 T 22-04-2016 RPIC12D_RS06105 55dc17f558a90fbd2a9f875a5bb5e979 429 Pfam PF00529 HlyD membrane-fusion protein of T1SS 48 359 2.0E-15 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RPIC12D_RS06105 55dc17f558a90fbd2a9f875a5bb5e979 429 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 72 302 5.6E-12 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RPIC12D_RS06105 55dc17f558a90fbd2a9f875a5bb5e979 429 PANTHER PTHR30386:SF6 2 389 4.2E-162 T 22-04-2016 RPIC12D_RS06105 55dc17f558a90fbd2a9f875a5bb5e979 429 SUPERFAMILY SSF56954 104 226 6.8E-7 T 22-04-2016 RPIC12D_RS06105 55dc17f558a90fbd2a9f875a5bb5e979 429 PANTHER PTHR30386 2 389 4.2E-162 T 22-04-2016 RPIC12D_RS02880 2f12a6a107d40ce2ceb9762bcc1d850a 453 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 209 301 1.4E-36 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 RPIC12D_RS02880 2f12a6a107d40ce2ceb9762bcc1d850a 453 PANTHER PTHR11374 1 452 1.1E-246 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RPIC12D_RS02880 2f12a6a107d40ce2ceb9762bcc1d850a 453 SUPERFAMILY SSF48179 209 303 2.21E-31 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS02880 2f12a6a107d40ce2ceb9762bcc1d850a 453 Gene3D G3DSA:3.40.50.720 1 211 1.5E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02880 2f12a6a107d40ce2ceb9762bcc1d850a 453 PANTHER PTHR11374:SF18 1 452 1.1E-246 T 22-04-2016 RPIC12D_RS02880 2f12a6a107d40ce2ceb9762bcc1d850a 453 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 433 7.6E-132 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RPIC12D_RS02880 2f12a6a107d40ce2ceb9762bcc1d850a 453 SUPERFAMILY SSF51735 1 200 8.26E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02880 2f12a6a107d40ce2ceb9762bcc1d850a 453 Gene3D G3DSA:3.40.50.720 240 452 1.3E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02880 2f12a6a107d40ce2ceb9762bcc1d850a 453 SUPERFAMILY SSF52413 310 448 9.02E-41 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RPIC12D_RS02880 2f12a6a107d40ce2ceb9762bcc1d850a 453 PIRSF PIRSF000124 1 452 6.1E-147 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RPIC12D_RS02880 2f12a6a107d40ce2ceb9762bcc1d850a 453 PIRSF PIRSF500134 1 453 4.5E-188 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 RPIC12D_RS02880 2f12a6a107d40ce2ceb9762bcc1d850a 453 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 182 1.7E-65 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 RPIC12D_RS02880 2f12a6a107d40ce2ceb9762bcc1d850a 453 Gene3D G3DSA:1.20.5.100 212 237 7.0E-17 T 22-04-2016 RPIC12D_RS02880 2f12a6a107d40ce2ceb9762bcc1d850a 453 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 437 1.9E-32 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RPIC12D_RS02880 2f12a6a107d40ce2ceb9762bcc1d850a 453 SMART SM00984 325 437 2.9E-51 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RPIC12D_RS06700 cc00a59f0350058b6310f4443ea1a495 1171 SMART SM00968 518 625 6.9E-11 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RPIC12D_RS06700 cc00a59f0350058b6310f4443ea1a495 1171 SUPERFAMILY SSF52540 2 213 5.46E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06700 cc00a59f0350058b6310f4443ea1a495 1171 SUPERFAMILY SSF52540 1047 1162 5.46E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06700 cc00a59f0350058b6310f4443ea1a495 1171 PIRSF PIRSF005719 1 1170 6.7E-256 T 22-04-2016 IPR024704 Structural maintenance of chromosomes protein RPIC12D_RS06700 cc00a59f0350058b6310f4443ea1a495 1171 Gene3D G3DSA:3.40.50.300 1054 1167 5.1E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06700 cc00a59f0350058b6310f4443ea1a495 1171 Gene3D G3DSA:3.40.50.300 437 460 5.1E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06700 cc00a59f0350058b6310f4443ea1a495 1171 Gene3D G3DSA:3.40.50.300 2 187 5.1E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06700 cc00a59f0350058b6310f4443ea1a495 1171 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1163 22.458 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 RPIC12D_RS06700 cc00a59f0350058b6310f4443ea1a495 1171 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1161 0.0 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 RPIC12D_RS06700 cc00a59f0350058b6310f4443ea1a495 1171 SUPERFAMILY SSF75553 485 672 1.12E-7 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RPIC12D_RS06700 cc00a59f0350058b6310f4443ea1a495 1171 PANTHER PTHR18937 420 1169 1.7E-265 T 22-04-2016 RPIC12D_RS06700 cc00a59f0350058b6310f4443ea1a495 1171 PANTHER PTHR18937 2 391 1.7E-265 T 22-04-2016 RPIC12D_RS06700 cc00a59f0350058b6310f4443ea1a495 1171 Pfam PF06470 SMC proteins Flexible Hinge Domain 523 623 5.5E-7 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RPIC12D_RS06700 cc00a59f0350058b6310f4443ea1a495 1171 SUPERFAMILY SSF57997 705 899 1.31E-5 T 22-04-2016 RPIC12D_RS06700 cc00a59f0350058b6310f4443ea1a495 1171 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1154 4.4E-64 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal RPIC12D_RS06700 cc00a59f0350058b6310f4443ea1a495 1171 PANTHER PTHR18937:SF261 420 1169 1.7E-265 T 22-04-2016 RPIC12D_RS06700 cc00a59f0350058b6310f4443ea1a495 1171 PANTHER PTHR18937:SF261 2 391 1.7E-265 T 22-04-2016 RPIC12D_RS17165 4222bdbee6ca39e43c190fdec3001ce9 423 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 295 2.4E-11 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RPIC12D_RS17165 4222bdbee6ca39e43c190fdec3001ce9 423 SUPERFAMILY SSF111369 53 301 1.96E-81 T 22-04-2016 RPIC12D_RS17165 4222bdbee6ca39e43c190fdec3001ce9 423 Gene3D G3DSA:2.40.50.100 174 209 6.0E-22 T 22-04-2016 RPIC12D_RS17165 4222bdbee6ca39e43c190fdec3001ce9 423 Gene3D G3DSA:2.40.50.100 66 99 6.0E-22 T 22-04-2016 RPIC12D_RS17165 4222bdbee6ca39e43c190fdec3001ce9 423 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 376 1.9E-82 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RPIC12D_RS17165 4222bdbee6ca39e43c190fdec3001ce9 423 PANTHER PTHR30158 1 382 2.4E-167 T 22-04-2016 RPIC12D_RS17165 4222bdbee6ca39e43c190fdec3001ce9 423 PANTHER PTHR30158:SF3 1 382 2.4E-167 T 22-04-2016 RPIC12D_RS16155 627124daed7c194213fe349ffc3111d1 333 PANTHER PTHR13812 5 321 1.1E-45 T 22-04-2016 RPIC12D_RS16155 627124daed7c194213fe349ffc3111d1 333 SUPERFAMILY SSF51735 4 329 7.88E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS16155 627124daed7c194213fe349ffc3111d1 333 PANTHER PTHR13812:SF19 5 321 1.1E-45 T 22-04-2016 RPIC12D_RS16155 627124daed7c194213fe349ffc3111d1 333 PIRSF PIRSF001439 1 331 1.5E-49 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin RPIC12D_RS16155 627124daed7c194213fe349ffc3111d1 333 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 13 255 3.0E-30 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin RPIC12D_RS16155 627124daed7c194213fe349ffc3111d1 333 Gene3D G3DSA:3.40.50.720 136 314 1.1E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS16155 627124daed7c194213fe349ffc3111d1 333 Gene3D G3DSA:3.30.1780.10 2 135 1.1E-41 T 22-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal RPIC12D_RS04865 67240ee8e49798f48206fc4456e649be 133 PANTHER PTHR40261 37 119 5.3E-22 T 22-04-2016 RPIC12D_RS04865 67240ee8e49798f48206fc4456e649be 133 SUPERFAMILY SSF50022 7 114 7.33E-21 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC12D_RS04865 67240ee8e49798f48206fc4456e649be 133 Gene3D G3DSA:2.102.10.10 4 117 9.9E-17 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC12D_RS04865 67240ee8e49798f48206fc4456e649be 133 PANTHER PTHR40261:SF2 37 119 5.3E-22 T 22-04-2016 RPIC12D_RS04865 67240ee8e49798f48206fc4456e649be 133 Pfam PF00355 Rieske [2Fe-2S] domain 35 97 1.4E-6 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC12D_RS17050 2ad1d8a7e5bdb66a269514664a2e09c4 500 Gene3D G3DSA:3.40.605.10 24 281 1.6E-103 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS17050 2ad1d8a7e5bdb66a269514664a2e09c4 500 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 268 275 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS17050 2ad1d8a7e5bdb66a269514664a2e09c4 500 Gene3D G3DSA:3.40.309.10 282 470 1.6E-69 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RPIC12D_RS17050 2ad1d8a7e5bdb66a269514664a2e09c4 500 PANTHER PTHR11699 4 497 5.4E-295 T 22-04-2016 RPIC12D_RS17050 2ad1d8a7e5bdb66a269514664a2e09c4 500 Pfam PF00171 Aldehyde dehydrogenase family 33 494 1.3E-173 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS17050 2ad1d8a7e5bdb66a269514664a2e09c4 500 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 44 493 9.9E-217 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 RPIC12D_RS17050 2ad1d8a7e5bdb66a269514664a2e09c4 500 SUPERFAMILY SSF53720 16 496 1.57E-172 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS17050 2ad1d8a7e5bdb66a269514664a2e09c4 500 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS17050 2ad1d8a7e5bdb66a269514664a2e09c4 500 PANTHER PTHR11699:SF49 4 497 5.4E-295 T 22-04-2016 RPIC12D_RS08825 aa5e07ffbc10372ef6a1253d9a20d9db 288 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 7 287 9.1E-100 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RPIC12D_RS08825 aa5e07ffbc10372ef6a1253d9a20d9db 288 SUPERFAMILY SSF53328 90 288 8.63E-61 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS08825 aa5e07ffbc10372ef6a1253d9a20d9db 288 Gene3D G3DSA:3.40.50.170 88 283 2.7E-56 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS08825 aa5e07ffbc10372ef6a1253d9a20d9db 288 Pfam PF00551 Formyl transferase 90 269 4.3E-36 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS08825 aa5e07ffbc10372ef6a1253d9a20d9db 288 SUPERFAMILY SSF55021 6 84 1.58E-19 T 22-04-2016 RPIC12D_RS08825 aa5e07ffbc10372ef6a1253d9a20d9db 288 PANTHER PTHR10520:SF7 6 281 6.3E-148 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RPIC12D_RS08825 aa5e07ffbc10372ef6a1253d9a20d9db 288 PIRSF PIRSF036480 3 288 5.9E-109 T 22-04-2016 RPIC12D_RS08825 aa5e07ffbc10372ef6a1253d9a20d9db 288 Pfam PF13740 ACT domain 6 38 2.2E-5 T 22-04-2016 RPIC12D_RS08825 aa5e07ffbc10372ef6a1253d9a20d9db 288 Gene3D G3DSA:3.30.70.260 4 84 7.4E-27 T 22-04-2016 RPIC12D_RS08825 aa5e07ffbc10372ef6a1253d9a20d9db 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 8 34 2.7E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RPIC12D_RS08825 aa5e07ffbc10372ef6a1253d9a20d9db 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 40 52 2.7E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RPIC12D_RS08825 aa5e07ffbc10372ef6a1253d9a20d9db 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 112 139 2.7E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RPIC12D_RS08825 aa5e07ffbc10372ef6a1253d9a20d9db 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 261 286 2.7E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RPIC12D_RS08825 aa5e07ffbc10372ef6a1253d9a20d9db 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 90 112 2.7E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RPIC12D_RS08825 aa5e07ffbc10372ef6a1253d9a20d9db 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 239 261 2.7E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RPIC12D_RS08825 aa5e07ffbc10372ef6a1253d9a20d9db 288 PANTHER PTHR10520 6 281 6.3E-148 T 22-04-2016 RPIC12D_RS08825 aa5e07ffbc10372ef6a1253d9a20d9db 288 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 3 287 47.85 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RPIC12D_RS12075 9d159b7fa0e4a387fe779cf8f364bd39 383 PANTHER PTHR30002 19 383 1.2E-150 T 22-04-2016 RPIC12D_RS12075 9d159b7fa0e4a387fe779cf8f364bd39 383 Pfam PF13484 4Fe-4S double cluster binding domain 220 284 1.1E-20 T 22-04-2016 RPIC12D_RS12075 9d159b7fa0e4a387fe779cf8f364bd39 383 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 24 343 47.357 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC12D_RS12075 9d159b7fa0e4a387fe779cf8f364bd39 383 Pfam PF08331 Domain of unknown function (DUF1730) 79 168 2.8E-19 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC12D_RS12075 9d159b7fa0e4a387fe779cf8f364bd39 383 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 221 232 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC12D_RS12075 9d159b7fa0e4a387fe779cf8f364bd39 383 Gene3D G3DSA:3.30.70.20 220 286 3.1E-6 T 22-04-2016 RPIC12D_RS12075 9d159b7fa0e4a387fe779cf8f364bd39 383 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 31 383 3.2E-134 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC12D_RS12075 9d159b7fa0e4a387fe779cf8f364bd39 383 PANTHER PTHR30002:SF4 19 383 1.2E-150 T 22-04-2016 RPIC12D_RS12075 9d159b7fa0e4a387fe779cf8f364bd39 383 SUPERFAMILY SSF54862 198 348 1.76E-18 T 22-04-2016 RPIC12D_RS08350 3ef2665d5806aafe49c832606289421e 635 SUPERFAMILY SSF103473 12 433 2.49E-30 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS08350 3ef2665d5806aafe49c832606289421e 635 SUPERFAMILY SSF69593 414 614 9.94E-35 T 22-04-2016 RPIC12D_RS08350 3ef2665d5806aafe49c832606289421e 635 Gene3D G3DSA:1.20.1250.20 232 433 9.6E-11 T 22-04-2016 RPIC12D_RS08350 3ef2665d5806aafe49c832606289421e 635 Pfam PF01553 Acyltransferase 449 577 4.5E-28 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RPIC12D_RS08350 3ef2665d5806aafe49c832606289421e 635 PANTHER PTHR10434 354 635 1.3E-120 T 22-04-2016 RPIC12D_RS08350 3ef2665d5806aafe49c832606289421e 635 Pfam PF07690 Major Facilitator Superfamily 19 336 1.6E-11 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS08350 3ef2665d5806aafe49c832606289421e 635 Gene3D G3DSA:1.20.1250.20 19 197 4.5E-7 T 22-04-2016 RPIC12D_RS08350 3ef2665d5806aafe49c832606289421e 635 Gene3D G3DSA:3.40.1130.10 449 577 1.0E-21 T 22-04-2016 RPIC12D_RS08350 3ef2665d5806aafe49c832606289421e 635 SMART SM00563 464 580 2.8E-30 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RPIC12D_RS08350 3ef2665d5806aafe49c832606289421e 635 PANTHER PTHR10434:SF15 354 635 1.3E-120 T 22-04-2016 RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 5 465 31.227 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 311 3.8E-98 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 Gene3D G3DSA:1.10.1160.10 238 320 1.7E-34 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 Gene3D G3DSA:1.10.10.350 370 463 1.4E-21 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 Gene3D G3DSA:3.90.800.10 70 186 4.2E-34 T 22-04-2016 RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 463 4.8E-166 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 SUPERFAMILY SSF48163 305 464 1.57E-39 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 SUPERFAMILY SSF52374 5 302 4.56E-108 T 22-04-2016 RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 Gene3D G3DSA:1.10.8.70 324 364 3.5E-5 T 22-04-2016 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 PANTHER PTHR11451 3 321 3.6E-91 T 22-04-2016 RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 PANTHER PTHR11451:SF41 3 321 3.6E-91 T 22-04-2016 RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 Gene3D G3DSA:3.40.50.620 5 69 2.7E-48 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 Gene3D G3DSA:3.40.50.620 187 236 2.7E-48 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 2.1E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 201 209 2.1E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 2.1E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 2.1E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC12D_RS05595 4e30d3dacac3b9aceaf50501b80c3673 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 185 195 2.1E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC12D_RS13835 151e62b34da0dfd22782a1f231dc7f01 267 SUPERFAMILY SSF51366 1 266 4.0E-89 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RPIC12D_RS13835 151e62b34da0dfd22782a1f231dc7f01 267 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 267 36.154 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RPIC12D_RS13835 151e62b34da0dfd22782a1f231dc7f01 267 PANTHER PTHR22854:SF2 1 267 2.6E-108 T 22-04-2016 RPIC12D_RS13835 151e62b34da0dfd22782a1f231dc7f01 267 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 61 79 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RPIC12D_RS13835 151e62b34da0dfd22782a1f231dc7f01 267 PANTHER PTHR22854 1 267 2.6E-108 T 22-04-2016 RPIC12D_RS13835 151e62b34da0dfd22782a1f231dc7f01 267 Gene3D G3DSA:3.20.20.70 1 266 2.0E-108 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS13835 151e62b34da0dfd22782a1f231dc7f01 267 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 264 6.8E-96 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RPIC12D_RS01140 ded2609587734aa692b67ddc3ae7f44d 85 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 RPIC12D_RS01140 ded2609587734aa692b67ddc3ae7f44d 85 Pfam PF00462 Glutaredoxin 4 64 1.1E-19 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 RPIC12D_RS01140 ded2609587734aa692b67ddc3ae7f44d 85 PRINTS PR00160 Glutaredoxin signature 61 74 4.3E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup RPIC12D_RS01140 ded2609587734aa692b67ddc3ae7f44d 85 PRINTS PR00160 Glutaredoxin signature 47 60 4.3E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup RPIC12D_RS01140 ded2609587734aa692b67ddc3ae7f44d 85 PRINTS PR00160 Glutaredoxin signature 4 22 4.3E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup RPIC12D_RS01140 ded2609587734aa692b67ddc3ae7f44d 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 5.1E-32 T 22-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 RPIC12D_RS01140 ded2609587734aa692b67ddc3ae7f44d 85 SUPERFAMILY SSF52833 1 84 2.45E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS01140 ded2609587734aa692b67ddc3ae7f44d 85 PANTHER PTHR10168 4 83 8.0E-24 T 22-04-2016 RPIC12D_RS01140 ded2609587734aa692b67ddc3ae7f44d 85 Gene3D G3DSA:3.40.30.10 1 74 5.0E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS15910 3be7509af4e78b1977f3a1922b2109dc 367 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 146 162 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC12D_RS15910 3be7509af4e78b1977f3a1922b2109dc 367 PANTHER PTHR21091 7 360 2.7E-139 T 22-04-2016 RPIC12D_RS15910 3be7509af4e78b1977f3a1922b2109dc 367 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 23 32 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC12D_RS15910 3be7509af4e78b1977f3a1922b2109dc 367 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 354 3.1E-132 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC12D_RS15910 3be7509af4e78b1977f3a1922b2109dc 367 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 7 356 49.821 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC12D_RS15910 3be7509af4e78b1977f3a1922b2109dc 367 SUPERFAMILY SSF51726 4 358 4.32E-111 T 22-04-2016 RPIC12D_RS15910 3be7509af4e78b1977f3a1922b2109dc 367 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 10 354 6.1E-124 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC12D_RS15910 3be7509af4e78b1977f3a1922b2109dc 367 Gene3D G3DSA:3.20.20.210 3 358 1.8E-143 T 22-04-2016 RPIC12D_RS15910 3be7509af4e78b1977f3a1922b2109dc 367 PANTHER PTHR21091:SF2 7 360 2.7E-139 T 22-04-2016 RPIC12D_RS13855 971128d270d1c4ed49a019d283c26794 620 PANTHER PTHR22939:SF73 510 581 1.1E-15 T 22-04-2016 RPIC12D_RS13855 971128d270d1c4ed49a019d283c26794 620 SUPERFAMILY SSF50156 498 589 9.86E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS13855 971128d270d1c4ed49a019d283c26794 620 PIRSF PIRSF016493 1 607 3.1E-206 T 22-04-2016 IPR024191 Peptidase M61 RPIC12D_RS13855 971128d270d1c4ed49a019d283c26794 620 SUPERFAMILY SSF55486 252 480 1.03E-9 T 22-04-2016 RPIC12D_RS13855 971128d270d1c4ed49a019d283c26794 620 Pfam PF05299 M61 glycyl aminopeptidase 289 405 6.7E-47 T 22-04-2016 IPR007963 Peptidase M61, catalytic domain RPIC12D_RS13855 971128d270d1c4ed49a019d283c26794 620 Pfam PF13180 PDZ domain 502 579 5.1E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS13855 971128d270d1c4ed49a019d283c26794 620 SMART SM00228 501 570 1.0E-5 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS13855 971128d270d1c4ed49a019d283c26794 620 PANTHER PTHR22939 510 581 1.1E-15 T 22-04-2016 RPIC12D_RS13855 971128d270d1c4ed49a019d283c26794 620 Gene3D G3DSA:2.30.42.10 488 584 4.3E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS11470 f60611b1f6a577505d4f01d0882bdd80 79 Pfam PF13560 Helix-turn-helix domain 9 56 7.1E-8 T 22-04-2016 RPIC12D_RS11470 f60611b1f6a577505d4f01d0882bdd80 79 Gene3D G3DSA:1.10.260.40 7 71 3.9E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS11470 f60611b1f6a577505d4f01d0882bdd80 79 SUPERFAMILY SSF47413 6 53 5.07E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS08470 136b3021310ac48fe764570e305946a9 497 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 67 491 6.3E-191 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath RPIC12D_RS08470 136b3021310ac48fe764570e305946a9 497 PANTHER PTHR35565:SF3 1 496 0.0 T 22-04-2016 RPIC12D_RS08470 136b3021310ac48fe764570e305946a9 497 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 491 4.8E-218 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath RPIC12D_RS08470 136b3021310ac48fe764570e305946a9 497 PANTHER PTHR35565 1 496 0.0 T 22-04-2016 RPIC12D_RS01125 7562f62735bec3482b9d359ce3cd70c0 538 SUPERFAMILY SSF52096 193 386 4.47E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS01125 7562f62735bec3482b9d359ce3cd70c0 538 SUPERFAMILY SSF52096 30 119 4.47E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS01125 7562f62735bec3482b9d359ce3cd70c0 538 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 53 384 3.7E-97 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 RPIC12D_RS01125 7562f62735bec3482b9d359ce3cd70c0 538 Pfam PF13180 PDZ domain 101 180 1.3E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS01125 7562f62735bec3482b9d359ce3cd70c0 538 Gene3D G3DSA:3.90.226.10 449 476 2.0E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS01125 7562f62735bec3482b9d359ce3cd70c0 538 Gene3D G3DSA:3.90.226.10 184 384 2.0E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS01125 7562f62735bec3482b9d359ce3cd70c0 538 PANTHER PTHR32060 54 275 4.6E-115 T 22-04-2016 RPIC12D_RS01125 7562f62735bec3482b9d359ce3cd70c0 538 PANTHER PTHR32060 293 450 4.6E-115 T 22-04-2016 RPIC12D_RS01125 7562f62735bec3482b9d359ce3cd70c0 538 Pfam PF03572 Peptidase family S41 200 381 2.0E-52 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 RPIC12D_RS01125 7562f62735bec3482b9d359ce3cd70c0 538 SUPERFAMILY SSF50156 95 185 6.02E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS01125 7562f62735bec3482b9d359ce3cd70c0 538 Gene3D G3DSA:3.30.750.44 55 107 5.7E-10 T 22-04-2016 RPIC12D_RS01125 7562f62735bec3482b9d359ce3cd70c0 538 SMART SM00245 174 382 7.0E-59 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 RPIC12D_RS01125 7562f62735bec3482b9d359ce3cd70c0 538 SMART SM00228 101 172 4.6E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS01125 7562f62735bec3482b9d359ce3cd70c0 538 Gene3D G3DSA:2.30.42.10 108 183 3.0E-29 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS00150 9e8853294c786d429b625055383a9819 396 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 373 1.7E-67 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC12D_RS00150 9e8853294c786d429b625055383a9819 396 PIRSF PIRSF000497 1 385 1.3E-170 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC12D_RS00150 9e8853294c786d429b625055383a9819 396 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 385 56.412 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC12D_RS00150 9e8853294c786d429b625055383a9819 396 SUPERFAMILY SSF55973 113 234 2.08E-51 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC12D_RS00150 9e8853294c786d429b625055383a9819 396 Pfam PF02772 S-adenosylmethionine synthetase, central domain 118 233 9.9E-47 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC12D_RS00150 9e8853294c786d429b625055383a9819 396 SUPERFAMILY SSF55973 4 110 1.37E-45 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC12D_RS00150 9e8853294c786d429b625055383a9819 396 Gene3D G3DSA:3.30.300.10 136 235 9.1E-44 T 22-04-2016 RPIC12D_RS00150 9e8853294c786d429b625055383a9819 396 Gene3D G3DSA:3.30.300.10 12 135 1.7E-46 T 22-04-2016 RPIC12D_RS00150 9e8853294c786d429b625055383a9819 396 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC12D_RS00150 9e8853294c786d429b625055383a9819 396 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC12D_RS00150 9e8853294c786d429b625055383a9819 396 PANTHER PTHR11964 5 380 1.6E-262 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC12D_RS00150 9e8853294c786d429b625055383a9819 396 Gene3D G3DSA:3.30.300.10 246 385 1.4E-67 T 22-04-2016 RPIC12D_RS00150 9e8853294c786d429b625055383a9819 396 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 2.1E-40 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC12D_RS00150 9e8853294c786d429b625055383a9819 396 SUPERFAMILY SSF55973 235 386 4.32E-67 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC12D_RS00150 9e8853294c786d429b625055383a9819 396 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 383 2.5E-181 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC12D_RS01095 34b7a6c818f78da15228c9bc516da538 151 SUPERFAMILY SSF53062 1 127 4.97E-29 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RPIC12D_RS01095 34b7a6c818f78da15228c9bc516da538 151 Gene3D G3DSA:3.40.50.510 1 128 8.1E-38 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RPIC12D_RS01095 34b7a6c818f78da15228c9bc516da538 151 PANTHER PTHR33799 2 137 1.7E-26 T 22-04-2016 RPIC12D_RS01095 34b7a6c818f78da15228c9bc516da538 151 PANTHER PTHR33799:SF1 2 137 1.7E-26 T 22-04-2016 RPIC12D_RS01095 34b7a6c818f78da15228c9bc516da538 151 Pfam PF03610 PTS system fructose IIA component 3 107 2.4E-18 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RPIC12D_RS11680 4e28c88648e233d2da2641970c1d6c87 458 SUPERFAMILY SSF82861 183 265 1.05E-9 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RPIC12D_RS11680 4e28c88648e233d2da2641970c1d6c87 458 Gene3D G3DSA:3.30.70.100 334 420 7.7E-19 T 22-04-2016 RPIC12D_RS11680 4e28c88648e233d2da2641970c1d6c87 458 PANTHER PTHR30347 6 454 1.5E-67 T 22-04-2016 RPIC12D_RS11680 4e28c88648e233d2da2641970c1d6c87 458 Gene3D G3DSA:2.30.30.60 283 330 6.4E-9 T 22-04-2016 RPIC12D_RS11680 4e28c88648e233d2da2641970c1d6c87 458 SUPERFAMILY SSF82689 333 431 7.85E-26 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RPIC12D_RS11680 4e28c88648e233d2da2641970c1d6c87 458 Pfam PF00924 Mechanosensitive ion channel 225 422 5.6E-43 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RPIC12D_RS11680 4e28c88648e233d2da2641970c1d6c87 458 SUPERFAMILY SSF50182 267 330 1.77E-11 T 22-04-2016 IPR010920 LSM domain RPIC12D_RS09740 53cb13c3b4340fdcb28280ce13b19765 252 SMART SM00895 100 224 8.4E-17 T 22-04-2016 IPR011711 GntR, C-terminal RPIC12D_RS09740 53cb13c3b4340fdcb28280ce13b19765 252 SUPERFAMILY SSF46785 24 94 3.96E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS09740 53cb13c3b4340fdcb28280ce13b19765 252 SMART SM00345 32 90 5.6E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS09740 53cb13c3b4340fdcb28280ce13b19765 252 PANTHER PTHR11751 26 116 2.5E-21 T 22-04-2016 RPIC12D_RS09740 53cb13c3b4340fdcb28280ce13b19765 252 Pfam PF07729 FCD domain 101 223 1.2E-23 T 22-04-2016 IPR011711 GntR, C-terminal RPIC12D_RS09740 53cb13c3b4340fdcb28280ce13b19765 252 Gene3D G3DSA:1.10.10.10 19 91 1.7E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS09740 53cb13c3b4340fdcb28280ce13b19765 252 Pfam PF00392 Bacterial regulatory proteins, gntR family 30 90 5.4E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS09740 53cb13c3b4340fdcb28280ce13b19765 252 Gene3D G3DSA:1.20.120.530 93 230 7.7E-30 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC12D_RS09740 53cb13c3b4340fdcb28280ce13b19765 252 SUPERFAMILY SSF48008 96 230 1.07E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC12D_RS08310 534adb69cff098f46e9e8ac86c9bbe2a 259 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 5 259 6.8E-110 T 22-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 RPIC12D_RS08310 534adb69cff098f46e9e8ac86c9bbe2a 259 PANTHER PTHR24322 9 138 7.4E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08310 534adb69cff098f46e9e8ac86c9bbe2a 259 PANTHER PTHR24322 154 186 7.4E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08310 534adb69cff098f46e9e8ac86c9bbe2a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08310 534adb69cff098f46e9e8ac86c9bbe2a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 2.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08310 534adb69cff098f46e9e8ac86c9bbe2a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08310 534adb69cff098f46e9e8ac86c9bbe2a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08310 534adb69cff098f46e9e8ac86c9bbe2a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08310 534adb69cff098f46e9e8ac86c9bbe2a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08310 534adb69cff098f46e9e8ac86c9bbe2a 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 6.0E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08310 534adb69cff098f46e9e8ac86c9bbe2a 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 6.0E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08310 534adb69cff098f46e9e8ac86c9bbe2a 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 6.0E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08310 534adb69cff098f46e9e8ac86c9bbe2a 259 Gene3D G3DSA:3.40.50.720 1 257 7.2E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS08310 534adb69cff098f46e9e8ac86c9bbe2a 259 SUPERFAMILY SSF51735 3 258 4.26E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS08310 534adb69cff098f46e9e8ac86c9bbe2a 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC12D_RS08310 534adb69cff098f46e9e8ac86c9bbe2a 259 Pfam PF00106 short chain dehydrogenase 5 197 4.0E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10495 17dc0ff44ad2c09fda0cc5ebb700734e 191 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 1.2E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS10495 17dc0ff44ad2c09fda0cc5ebb700734e 191 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 41 61 1.2E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS10495 17dc0ff44ad2c09fda0cc5ebb700734e 191 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 1.2E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS10495 17dc0ff44ad2c09fda0cc5ebb700734e 191 Pfam PF13411 MerR HTH family regulatory protein 6 70 5.1E-16 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS10495 17dc0ff44ad2c09fda0cc5ebb700734e 191 Gene3D G3DSA:1.10.1660.10 59 111 4.5E-5 T 22-04-2016 RPIC12D_RS10495 17dc0ff44ad2c09fda0cc5ebb700734e 191 SMART SM00422 5 74 8.8E-23 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS10495 17dc0ff44ad2c09fda0cc5ebb700734e 191 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS10495 17dc0ff44ad2c09fda0cc5ebb700734e 191 PANTHER PTHR30204 5 124 6.3E-41 T 22-04-2016 RPIC12D_RS10495 17dc0ff44ad2c09fda0cc5ebb700734e 191 SUPERFAMILY SSF46955 5 120 1.68E-26 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC12D_RS10495 17dc0ff44ad2c09fda0cc5ebb700734e 191 Gene3D G3DSA:1.10.1660.10 3 58 7.6E-24 T 22-04-2016 RPIC12D_RS10495 17dc0ff44ad2c09fda0cc5ebb700734e 191 PANTHER PTHR30204:SF2 5 124 6.3E-41 T 22-04-2016 RPIC12D_RS12870 67f631f9e4b6046a72cef520eabb66c5 426 Gene3D G3DSA:3.40.605.10 384 425 5.1E-97 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS12870 67f631f9e4b6046a72cef520eabb66c5 426 Gene3D G3DSA:3.40.605.10 4 228 5.1E-97 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS12870 67f631f9e4b6046a72cef520eabb66c5 426 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 17 415 1.9E-143 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC12D_RS12870 67f631f9e4b6046a72cef520eabb66c5 426 Gene3D G3DSA:3.40.309.10 230 383 1.5E-40 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RPIC12D_RS12870 67f631f9e4b6046a72cef520eabb66c5 426 PANTHER PTHR11063:SF8 5 425 5.7E-170 T 22-04-2016 RPIC12D_RS12870 67f631f9e4b6046a72cef520eabb66c5 426 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 9 425 40.64 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC12D_RS12870 67f631f9e4b6046a72cef520eabb66c5 426 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 332 354 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC12D_RS12870 67f631f9e4b6046a72cef520eabb66c5 426 Pfam PF00171 Aldehyde dehydrogenase family 318 382 1.5E-7 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS12870 67f631f9e4b6046a72cef520eabb66c5 426 Pfam PF00171 Aldehyde dehydrogenase family 15 281 7.4E-15 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS12870 67f631f9e4b6046a72cef520eabb66c5 426 PIRSF PIRSF000151 2 426 4.3E-169 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC12D_RS12870 67f631f9e4b6046a72cef520eabb66c5 426 PANTHER PTHR11063 5 425 5.7E-170 T 22-04-2016 RPIC12D_RS12870 67f631f9e4b6046a72cef520eabb66c5 426 SUPERFAMILY SSF53720 10 425 7.59E-115 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS11220 6427f3fa389c2e85dc838e7502954ee5 389 Pfam PF13458 Periplasmic binding protein 28 374 1.4E-50 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC12D_RS11220 6427f3fa389c2e85dc838e7502954ee5 389 SUPERFAMILY SSF53822 27 385 6.56E-70 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS11220 6427f3fa389c2e85dc838e7502954ee5 389 Gene3D G3DSA:3.40.50.2300 27 221 1.1E-41 T 22-04-2016 RPIC12D_RS11220 6427f3fa389c2e85dc838e7502954ee5 389 PANTHER PTHR30483:SF7 11 386 6.3E-122 T 22-04-2016 RPIC12D_RS11220 6427f3fa389c2e85dc838e7502954ee5 389 PANTHER PTHR30483 11 386 6.3E-122 T 22-04-2016 RPIC12D_RS01470 e570353ce0b0b0bea7d15ce1837642f2 327 PANTHER PTHR38418 1 200 4.1E-37 T 22-04-2016 RPIC12D_RS01470 e570353ce0b0b0bea7d15ce1837642f2 327 SMART SM00116 278 326 0.0099 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS01470 e570353ce0b0b0bea7d15ce1837642f2 327 SMART SM00116 213 261 2.1 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS01470 e570353ce0b0b0bea7d15ce1837642f2 327 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 48 317 2.0E-104 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 RPIC12D_RS01470 e570353ce0b0b0bea7d15ce1837642f2 327 Gene3D G3DSA:3.40.50.10490 14 197 5.8E-53 T 22-04-2016 RPIC12D_RS01470 e570353ce0b0b0bea7d15ce1837642f2 327 SUPERFAMILY SSF53697 11 324 9.12E-66 T 22-04-2016 RPIC12D_RS01470 e570353ce0b0b0bea7d15ce1837642f2 327 Pfam PF01380 SIS domain 46 175 9.7E-31 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RPIC12D_RS01470 e570353ce0b0b0bea7d15ce1837642f2 327 PIRSF PIRSF004692 2 327 1.4E-128 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 RPIC12D_RS01470 e570353ce0b0b0bea7d15ce1837642f2 327 Gene3D G3DSA:3.10.580.10 198 324 6.3E-39 T 22-04-2016 RPIC12D_RS01470 e570353ce0b0b0bea7d15ce1837642f2 327 Pfam PF00571 CBS domain 204 260 5.2E-6 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS01470 e570353ce0b0b0bea7d15ce1837642f2 327 Pfam PF00571 CBS domain 272 324 1.1E-6 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS01470 e570353ce0b0b0bea7d15ce1837642f2 327 PANTHER PTHR38418:SF1 1 200 4.1E-37 T 22-04-2016 RPIC12D_RS04955 00549382cbc9b749b243db68f406fccd 297 ProSitePatterns PS00501 Signal peptidases I serine active site. 102 109 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 RPIC12D_RS04955 00549382cbc9b749b243db68f406fccd 297 Pfam PF10502 Signal peptidase, peptidase S26 245 284 2.0E-6 T 22-04-2016 IPR019533 Peptidase S26 RPIC12D_RS04955 00549382cbc9b749b243db68f406fccd 297 PANTHER PTHR12383 232 293 3.7E-86 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC12D_RS04955 00549382cbc9b749b243db68f406fccd 297 PANTHER PTHR12383 1 203 3.7E-86 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC12D_RS04955 00549382cbc9b749b243db68f406fccd 297 Gene3D G3DSA:2.10.109.10 89 166 1.5E-57 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RPIC12D_RS04955 00549382cbc9b749b243db68f406fccd 297 Gene3D G3DSA:2.10.109.10 247 293 1.5E-57 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RPIC12D_RS04955 00549382cbc9b749b243db68f406fccd 297 Pfam PF00717 Peptidase S24-like 99 181 4.7E-22 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B RPIC12D_RS04955 00549382cbc9b749b243db68f406fccd 297 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 78 286 9.5E-53 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC12D_RS04955 00549382cbc9b749b243db68f406fccd 297 SUPERFAMILY SSF51306 91 293 1.05E-71 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RPIC12D_RS04955 00549382cbc9b749b243db68f406fccd 297 PANTHER PTHR12383:SF27 232 293 3.7E-86 T 22-04-2016 RPIC12D_RS04955 00549382cbc9b749b243db68f406fccd 297 PANTHER PTHR12383:SF27 1 203 3.7E-86 T 22-04-2016 RPIC12D_RS04955 00549382cbc9b749b243db68f406fccd 297 ProSitePatterns PS00761 Signal peptidases I signature 3. 252 265 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 RPIC12D_RS04955 00549382cbc9b749b243db68f406fccd 297 Gene3D G3DSA:2.170.230.10 167 224 7.4E-6 T 22-04-2016 IPR019766 Peptidase S26A, all-beta subdomain RPIC12D_RS04955 00549382cbc9b749b243db68f406fccd 297 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 93 109 8.9E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC12D_RS04955 00549382cbc9b749b243db68f406fccd 297 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 157 169 8.9E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC12D_RS04955 00549382cbc9b749b243db68f406fccd 297 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 247 266 8.9E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC12D_RS04955 00549382cbc9b749b243db68f406fccd 297 ProSitePatterns PS00760 Signal peptidases I lysine active site. 159 171 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 RPIC12D_RS00690 c254b56c5fb0941836310f69652c4964 128 PANTHER PTHR37811:SF2 14 128 6.5E-38 T 22-04-2016 RPIC12D_RS00690 c254b56c5fb0941836310f69652c4964 128 PANTHER PTHR37811 14 128 6.5E-38 T 22-04-2016 RPIC12D_RS00690 c254b56c5fb0941836310f69652c4964 128 SUPERFAMILY SSF54909 18 126 5.9E-33 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC12D_RS00690 c254b56c5fb0941836310f69652c4964 128 Pfam PF03992 Antibiotic biosynthesis monooxygenase 26 103 4.4E-6 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain RPIC12D_RS00690 c254b56c5fb0941836310f69652c4964 128 Gene3D G3DSA:3.30.70.900 45 126 7.7E-15 T 22-04-2016 RPIC12D_RS01835 dfa657ac2c123daa3f661577e3a9a1e0 612 PANTHER PTHR24221:SF18 2 605 0.0 T 22-04-2016 RPIC12D_RS01835 dfa657ac2c123daa3f661577e3a9a1e0 612 Pfam PF00005 ABC transporter 378 525 3.1E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS01835 dfa657ac2c123daa3f661577e3a9a1e0 612 PANTHER PTHR24221 2 605 0.0 T 22-04-2016 RPIC12D_RS01835 dfa657ac2c123daa3f661577e3a9a1e0 612 SUPERFAMILY SSF52540 349 595 7.79E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01835 dfa657ac2c123daa3f661577e3a9a1e0 612 Pfam PF00664 ABC transporter transmembrane region 39 311 1.2E-42 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC12D_RS01835 dfa657ac2c123daa3f661577e3a9a1e0 612 SMART SM00382 385 571 3.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS01835 dfa657ac2c123daa3f661577e3a9a1e0 612 Gene3D G3DSA:1.20.1560.10 24 348 2.2E-71 T 22-04-2016 RPIC12D_RS01835 dfa657ac2c123daa3f661577e3a9a1e0 612 ProSitePatterns PS00211 ABC transporters family signature. 497 511 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS01835 dfa657ac2c123daa3f661577e3a9a1e0 612 SUPERFAMILY SSF90123 24 338 1.96E-66 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC12D_RS01835 dfa657ac2c123daa3f661577e3a9a1e0 612 Gene3D G3DSA:3.40.50.300 360 591 3.6E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 Gene3D G3DSA:2.30.42.10 409 497 2.0E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 Gene3D G3DSA:2.30.42.10 289 385 3.9E-28 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 45 491 1.2E-159 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 SMART SM00228 407 485 7.8E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 SMART SM00228 287 369 3.3E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 SUPERFAMILY SSF50494 43 279 9.55E-69 T 22-04-2016 IPR009003 Peptidase S1, PA clan RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 Gene3D G3DSA:2.40.10.10 179 288 3.2E-44 T 22-04-2016 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 PRINTS PR00834 HtrA/DegQ protease family signature 187 211 1.2E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 PRINTS PR00834 HtrA/DegQ protease family signature 219 236 1.2E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 PRINTS PR00834 HtrA/DegQ protease family signature 327 339 1.2E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 PRINTS PR00834 HtrA/DegQ protease family signature 147 167 1.2E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 PRINTS PR00834 HtrA/DegQ protease family signature 126 138 1.2E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 PRINTS PR00834 HtrA/DegQ protease family signature 241 258 1.2E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 SUPERFAMILY SSF50156 245 369 3.81E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 Pfam PF13365 Trypsin-like peptidase domain 117 248 5.0E-35 T 22-04-2016 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 PANTHER PTHR22939 43 67 9.9E-125 T 22-04-2016 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 PANTHER PTHR22939 99 382 9.9E-125 T 22-04-2016 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 Pfam PF13180 PDZ domain 408 491 8.7E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 Pfam PF13180 PDZ domain 288 378 1.4E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 Gene3D G3DSA:2.40.10.10 45 178 1.1E-39 T 22-04-2016 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 SUPERFAMILY SSF50156 407 495 4.99E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 PANTHER PTHR22939:SF98 43 67 9.9E-125 T 22-04-2016 RPIC12D_RS04940 fa0e3ebf588a9ac7c7e2427fa7d0b1be 503 PANTHER PTHR22939:SF98 99 382 9.9E-125 T 22-04-2016 RPIC12D_RS10265 643722a21fc3a2a48de1487c55ad94d0 295 SMART SM00450 13 139 7.8E-20 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS10265 643722a21fc3a2a48de1487c55ad94d0 295 SMART SM00450 167 287 4.4E-9 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS10265 643722a21fc3a2a48de1487c55ad94d0 295 Gene3D G3DSA:3.40.250.10 157 294 2.2E-32 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS10265 643722a21fc3a2a48de1487c55ad94d0 295 Gene3D G3DSA:3.40.250.10 4 149 3.7E-49 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS10265 643722a21fc3a2a48de1487c55ad94d0 295 SUPERFAMILY SSF52821 5 145 2.23E-40 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS10265 643722a21fc3a2a48de1487c55ad94d0 295 ProSitePatterns PS00683 Rhodanese C-terminal signature. 271 281 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 RPIC12D_RS10265 643722a21fc3a2a48de1487c55ad94d0 295 PANTHER PTHR11364 1 294 1.1E-88 T 22-04-2016 RPIC12D_RS10265 643722a21fc3a2a48de1487c55ad94d0 295 SUPERFAMILY SSF52821 170 294 1.57E-30 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS10265 643722a21fc3a2a48de1487c55ad94d0 295 Pfam PF00581 Rhodanese-like domain 172 283 2.3E-6 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS10265 643722a21fc3a2a48de1487c55ad94d0 295 Pfam PF00581 Rhodanese-like domain 23 135 4.7E-16 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS10265 643722a21fc3a2a48de1487c55ad94d0 295 PANTHER PTHR11364:SF0 1 294 1.1E-88 T 22-04-2016 RPIC12D_RS02915 aba192e6fa8f9619ef2a11a7c2a63612 357 SUPERFAMILY SSF53756 1 344 1.71E-16 T 22-04-2016 RPIC12D_RS02915 aba192e6fa8f9619ef2a11a7c2a63612 357 Gene3D G3DSA:3.40.50.2000 189 340 5.5E-18 T 22-04-2016 RPIC12D_RS02915 aba192e6fa8f9619ef2a11a7c2a63612 357 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 1 298 2.7E-97 T 22-04-2016 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase RPIC12D_RS02915 aba192e6fa8f9619ef2a11a7c2a63612 357 Gene3D G3DSA:3.40.50.2000 15 105 1.0E-6 T 22-04-2016 RPIC12D_RS02915 aba192e6fa8f9619ef2a11a7c2a63612 357 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 234 340 2.5E-10 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC12D_RS03555 3ebe978d5c59ff1b19132f4099c6dd6d 310 Pfam PF16074 Type IV Pilus-assembly protein W 166 301 3.2E-24 T 22-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 RPIC12D_RS07455 42e3866f92ff26c064458e1673d54588 392 PANTHER PTHR18919:SF14 1 392 7.6E-218 T 22-04-2016 RPIC12D_RS07455 42e3866f92ff26c064458e1673d54588 392 Gene3D G3DSA:3.40.47.10 4 125 6.0E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS07455 42e3866f92ff26c064458e1673d54588 392 Gene3D G3DSA:3.40.47.10 185 274 6.0E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS07455 42e3866f92ff26c064458e1673d54588 392 SUPERFAMILY SSF53901 271 391 3.3E-42 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS07455 42e3866f92ff26c064458e1673d54588 392 SUPERFAMILY SSF53901 1 264 3.01E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS07455 42e3866f92ff26c064458e1673d54588 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RPIC12D_RS07455 42e3866f92ff26c064458e1673d54588 392 Gene3D G3DSA:3.40.47.10 142 184 3.4E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS07455 42e3866f92ff26c064458e1673d54588 392 Gene3D G3DSA:3.40.47.10 276 391 3.4E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS07455 42e3866f92ff26c064458e1673d54588 392 PIRSF PIRSF000429 1 392 1.3E-116 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC12D_RS07455 42e3866f92ff26c064458e1673d54588 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 3.3E-125 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC12D_RS07455 42e3866f92ff26c064458e1673d54588 392 PANTHER PTHR18919 1 392 7.6E-218 T 22-04-2016 RPIC12D_RS07455 42e3866f92ff26c064458e1673d54588 392 Pfam PF02803 Thiolase, C-terminal domain 270 390 5.5E-45 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RPIC12D_RS07455 42e3866f92ff26c064458e1673d54588 392 Pfam PF00108 Thiolase, N-terminal domain 5 260 4.7E-61 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RPIC12D_RS07455 42e3866f92ff26c064458e1673d54588 392 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RPIC12D_RS08280 1a484e466a5846bdee740c0b4e655508 154 Gene3D G3DSA:3.30.110.10 62 154 3.7E-43 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RPIC12D_RS08280 1a484e466a5846bdee740c0b4e655508 154 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 66 151 4.3E-40 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RPIC12D_RS08280 1a484e466a5846bdee740c0b4e655508 154 SUPERFAMILY SSF55200 65 154 1.44E-36 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RPIC12D_RS08280 1a484e466a5846bdee740c0b4e655508 154 Gene3D G3DSA:3.10.20.80 1 60 1.5E-25 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RPIC12D_RS08280 1a484e466a5846bdee740c0b4e655508 154 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 3 58 1.8E-23 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RPIC12D_RS08280 1a484e466a5846bdee740c0b4e655508 154 SUPERFAMILY SSF54364 2 60 2.88E-22 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RPIC12D_RS08280 1a484e466a5846bdee740c0b4e655508 154 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 153 2.3E-64 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RPIC12D_RS08280 1a484e466a5846bdee740c0b4e655508 154 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 153 25.933 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RPIC12D_RS08280 1a484e466a5846bdee740c0b4e655508 154 ProSitePatterns PS00938 Initiation factor 3 signature. 41 54 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 RPIC12D_RS08280 1a484e466a5846bdee740c0b4e655508 154 PANTHER PTHR10938 1 154 2.3E-62 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RPIC12D_RS16895 92952b88566f115c28bab18972251080 495 PANTHER PTHR11895 5 493 7.9E-222 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC12D_RS16895 92952b88566f115c28bab18972251080 495 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 487 94.966 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC12D_RS16895 92952b88566f115c28bab18972251080 495 SUPERFAMILY SSF75304 3 493 7.85E-163 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC12D_RS16895 92952b88566f115c28bab18972251080 495 PANTHER PTHR11895:SF7 5 493 7.9E-222 T 22-04-2016 RPIC12D_RS16895 92952b88566f115c28bab18972251080 495 Gene3D G3DSA:3.90.1300.10 2 493 3.1E-183 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC12D_RS16895 92952b88566f115c28bab18972251080 495 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 11 487 2.2E-177 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC12D_RS16895 92952b88566f115c28bab18972251080 495 Pfam PF01425 Amidase 22 476 8.0E-152 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC12D_RS16895 92952b88566f115c28bab18972251080 495 ProSitePatterns PS00571 Amidases signature. 148 179 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC12D_RS06310 dd4c07c1779a6af8ae5c9728bd7ada1d 313 Pfam PF02911 Formyl transferase, C-terminal domain 208 291 5.0E-15 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS06310 dd4c07c1779a6af8ae5c9728bd7ada1d 313 Pfam PF00551 Formyl transferase 59 182 2.0E-24 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS06310 dd4c07c1779a6af8ae5c9728bd7ada1d 313 Gene3D G3DSA:3.10.25.10 214 287 2.0E-16 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS06310 dd4c07c1779a6af8ae5c9728bd7ada1d 313 SUPERFAMILY SSF53328 9 207 1.57E-52 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS06310 dd4c07c1779a6af8ae5c9728bd7ada1d 313 Gene3D G3DSA:3.40.50.170 8 213 1.6E-47 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC12D_RS06310 dd4c07c1779a6af8ae5c9728bd7ada1d 313 PANTHER PTHR11138 1 287 1.0E-56 T 22-04-2016 RPIC12D_RS06310 dd4c07c1779a6af8ae5c9728bd7ada1d 313 SUPERFAMILY SSF50486 210 299 2.83E-19 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RPIC12D_RS08320 e9e558cd2ec01c4ba5680578420e0aa2 233 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 216 2.8E-77 T 22-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 RPIC12D_RS08320 e9e558cd2ec01c4ba5680578420e0aa2 233 Gene3D G3DSA:3.40.1080.10 2 215 8.0E-103 T 22-04-2016 RPIC12D_RS08320 e9e558cd2ec01c4ba5680578420e0aa2 233 SMART SM00882 5 217 9.8E-95 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC12D_RS08320 e9e558cd2ec01c4ba5680578420e0aa2 233 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 22-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 RPIC12D_RS08320 e9e558cd2ec01c4ba5680578420e0aa2 233 SUPERFAMILY SSF100950 2 228 2.77E-90 T 22-04-2016 RPIC12D_RS08320 e9e558cd2ec01c4ba5680578420e0aa2 233 PANTHER PTHR13707 1 232 3.1E-142 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC12D_RS08320 e9e558cd2ec01c4ba5680578420e0aa2 233 Pfam PF01144 Coenzyme A transferase 6 217 4.7E-81 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC12D_RS05470 690ab084491c7261a9e9b9d0d4ee5ef1 298 Gene3D G3DSA:1.10.10.10 3 84 1.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS05470 690ab084491c7261a9e9b9d0d4ee5ef1 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.1E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS05470 690ab084491c7261a9e9b9d0d4ee5ef1 298 PANTHER PTHR30537 1 294 8.1E-152 T 22-04-2016 RPIC12D_RS05470 690ab084491c7261a9e9b9d0d4ee5ef1 298 SUPERFAMILY SSF46785 4 112 1.03E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS05470 690ab084491c7261a9e9b9d0d4ee5ef1 298 SUPERFAMILY SSF53850 89 295 2.64E-40 T 22-04-2016 RPIC12D_RS05470 690ab084491c7261a9e9b9d0d4ee5ef1 298 Gene3D G3DSA:3.40.190.10 92 167 2.0E-7 T 22-04-2016 RPIC12D_RS05470 690ab084491c7261a9e9b9d0d4ee5ef1 298 Pfam PF03466 LysR substrate binding domain 88 293 6.9E-40 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS05470 690ab084491c7261a9e9b9d0d4ee5ef1 298 Gene3D G3DSA:3.40.190.10 168 259 1.0E-19 T 22-04-2016 RPIC12D_RS05470 690ab084491c7261a9e9b9d0d4ee5ef1 298 PANTHER PTHR30537:SF20 1 294 8.1E-152 T 22-04-2016 RPIC12D_RS09160 cad0d37ffe2f57c9d0a69fa3aa27c5d9 216 PANTHER PTHR11670:SF27 1 208 9.7E-106 T 22-04-2016 RPIC12D_RS09160 cad0d37ffe2f57c9d0a69fa3aa27c5d9 216 PANTHER PTHR11670 1 208 9.7E-106 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09160 cad0d37ffe2f57c9d0a69fa3aa27c5d9 216 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 44.203 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09160 cad0d37ffe2f57c9d0a69fa3aa27c5d9 216 SUPERFAMILY SSF52016 1 202 6.67E-65 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RPIC12D_RS09160 cad0d37ffe2f57c9d0a69fa3aa27c5d9 216 Pfam PF00694 Aconitase C-terminal domain 1 131 4.0E-38 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09160 cad0d37ffe2f57c9d0a69fa3aa27c5d9 216 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 9.7E-82 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09160 cad0d37ffe2f57c9d0a69fa3aa27c5d9 216 Gene3D G3DSA:3.20.19.10 1 204 2.9E-53 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RPIC12D_RS04165 326bce1d7e5c3d678a3e0a8d4d8363fc 123 Pfam PF01527 Transposase 11 68 3.5E-13 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS04165 326bce1d7e5c3d678a3e0a8d4d8363fc 123 SUPERFAMILY SSF48295 9 57 1.52E-11 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RPIC12D_RS04165 326bce1d7e5c3d678a3e0a8d4d8363fc 123 Gene3D G3DSA:1.10.10.60 17 61 2.2E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS13355 326bce1d7e5c3d678a3e0a8d4d8363fc 123 Pfam PF01527 Transposase 11 68 3.5E-13 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS13355 326bce1d7e5c3d678a3e0a8d4d8363fc 123 SUPERFAMILY SSF48295 9 57 1.52E-11 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RPIC12D_RS13355 326bce1d7e5c3d678a3e0a8d4d8363fc 123 Gene3D G3DSA:1.10.10.60 17 61 2.2E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS14915 326bce1d7e5c3d678a3e0a8d4d8363fc 123 Pfam PF01527 Transposase 11 68 3.5E-13 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS14915 326bce1d7e5c3d678a3e0a8d4d8363fc 123 SUPERFAMILY SSF48295 9 57 1.52E-11 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RPIC12D_RS14915 326bce1d7e5c3d678a3e0a8d4d8363fc 123 Gene3D G3DSA:1.10.10.60 17 61 2.2E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS13310 79e6ca39b61fe613c4fc7f8607c1e744 309 Pfam PF00348 Polyprenyl synthetase 19 250 8.0E-77 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RPIC12D_RS13310 79e6ca39b61fe613c4fc7f8607c1e744 309 SUPERFAMILY SSF48576 3 308 1.6E-99 T 22-04-2016 IPR008949 Isoprenoid synthase domain RPIC12D_RS13310 79e6ca39b61fe613c4fc7f8607c1e744 309 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 68 82 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RPIC12D_RS13310 79e6ca39b61fe613c4fc7f8607c1e744 309 PANTHER PTHR12001:SF47 1 309 9.4E-117 T 22-04-2016 RPIC12D_RS13310 79e6ca39b61fe613c4fc7f8607c1e744 309 Gene3D G3DSA:1.10.600.10 2 308 2.9E-102 T 22-04-2016 IPR008949 Isoprenoid synthase domain RPIC12D_RS13310 79e6ca39b61fe613c4fc7f8607c1e744 309 PANTHER PTHR12001 1 309 9.4E-117 T 22-04-2016 IPR017446 Polyprenyl synthetase-related RPIC12D_RS13310 79e6ca39b61fe613c4fc7f8607c1e744 309 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 190 202 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 SUPERFAMILY SSF47323 679 876 3.18E-33 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 6 876 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 Gene3D G3DSA:3.40.50.620 433 589 3.2E-148 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 Gene3D G3DSA:3.40.50.620 635 664 3.2E-148 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 Gene3D G3DSA:3.40.50.620 4 230 3.2E-148 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 PRINTS PR00985 Leucyl-tRNA synthetase signature 191 204 3.8E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 PRINTS PR00985 Leucyl-tRNA synthetase signature 573 583 3.8E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 PRINTS PR00985 Leucyl-tRNA synthetase signature 220 239 3.8E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 PRINTS PR00985 Leucyl-tRNA synthetase signature 159 175 3.8E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 PRINTS PR00985 Leucyl-tRNA synthetase signature 133 150 3.8E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 PRINTS PR00985 Leucyl-tRNA synthetase signature 540 562 3.8E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 PRINTS PR00985 Leucyl-tRNA synthetase signature 503 521 3.8E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 SUPERFAMILY SSF52374 432 684 7.8E-147 T 22-04-2016 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 SUPERFAMILY SSF52374 4 231 7.8E-147 T 22-04-2016 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 Gene3D G3DSA:1.10.730.10 665 813 7.6E-38 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 Gene3D G3DSA:3.90.740.10 315 431 2.6E-42 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 Gene3D G3DSA:3.90.740.10 231 281 2.6E-42 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 226 418 3.0E-66 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 SUPERFAMILY SSF50677 231 430 2.35E-50 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 434 589 3.2E-8 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 635 675 2.5E-6 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 PANTHER PTHR11946 253 590 0.0 T 22-04-2016 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 PANTHER PTHR11946 635 877 0.0 T 22-04-2016 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 PANTHER PTHR11946 1 212 0.0 T 22-04-2016 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 PANTHER PTHR11946:SF7 253 590 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 PANTHER PTHR11946:SF7 635 877 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 PANTHER PTHR11946:SF7 1 212 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 877 22.829 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 Pfam PF08264 Anticodon-binding domain of tRNA 717 839 3.3E-14 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RPIC12D_RS12885 cf39e7eaf6c1e73732a1205839fa07df 877 Pfam PF09334 tRNA synthetases class I (M) 44 177 3.5E-18 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS02040 a0fd53d7af72ae96da3375c3146a0266 301 PANTHER PTHR22911:SF63 16 299 4.8E-100 T 22-04-2016 RPIC12D_RS02040 a0fd53d7af72ae96da3375c3146a0266 301 PANTHER PTHR22911 16 299 4.8E-100 T 22-04-2016 RPIC12D_RS02040 a0fd53d7af72ae96da3375c3146a0266 301 Pfam PF00892 EamA-like transporter family 17 147 8.7E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS02040 a0fd53d7af72ae96da3375c3146a0266 301 Pfam PF00892 EamA-like transporter family 163 299 4.5E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS02040 a0fd53d7af72ae96da3375c3146a0266 301 SUPERFAMILY SSF103481 50 150 1.1E-13 T 22-04-2016 RPIC12D_RS02040 a0fd53d7af72ae96da3375c3146a0266 301 SUPERFAMILY SSF103481 198 301 1.15E-12 T 22-04-2016 RPIC12D_RS14305 9d1b1d1df64422fd3e9f5728106b51a3 142 SUPERFAMILY SSF81330 12 135 7.72E-35 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RPIC12D_RS14305 9d1b1d1df64422fd3e9f5728106b51a3 142 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 139 1.7E-42 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RPIC12D_RS14305 9d1b1d1df64422fd3e9f5728106b51a3 142 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 4 141 2.7E-37 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RPIC12D_RS14305 9d1b1d1df64422fd3e9f5728106b51a3 142 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 1.1E-10 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RPIC12D_RS14305 9d1b1d1df64422fd3e9f5728106b51a3 142 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 94 102 1.1E-10 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RPIC12D_RS14305 9d1b1d1df64422fd3e9f5728106b51a3 142 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 103 112 1.1E-10 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RPIC12D_RS14305 9d1b1d1df64422fd3e9f5728106b51a3 142 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 142 24.674 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RPIC12D_RS14305 9d1b1d1df64422fd3e9f5728106b51a3 142 PANTHER PTHR30266:SF2 1 142 2.0E-44 T 22-04-2016 RPIC12D_RS14305 9d1b1d1df64422fd3e9f5728106b51a3 142 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 22-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site RPIC12D_RS14305 9d1b1d1df64422fd3e9f5728106b51a3 142 PANTHER PTHR30266 1 142 2.0E-44 T 22-04-2016 RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 SUPERFAMILY SSF143517 992 1141 7.98E-39 T 22-04-2016 RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 PANTHER PTHR14025 381 1123 0.0 T 22-04-2016 RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 SUPERFAMILY SSF52540 355 462 4.2E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 SUPERFAMILY SSF52540 13 350 2.12E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 Gene3D G3DSA:3.30.2060.10 136 208 1.7E-12 T 22-04-2016 RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 SUPERFAMILY SSF52540 521 781 1.07E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 SMART SM01058 477 574 2.5E-49 T 22-04-2016 IPR003711 CarD-like/TRCF domain RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 SMART SM00982 1006 1106 1.6E-47 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 Gene3D G3DSA:3.40.50.300 587 784 1.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 40 1102 28.236 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 153 1079 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 Pfam PF00270 DEAD/DEAH box helicase 603 760 6.5E-17 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 Gene3D G3DSA:3.40.50.300 797 954 7.3E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 Pfam PF03461 TRCF domain 1008 1098 2.2E-27 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 Pfam PF02559 CarD-like/TRCF domain 478 573 6.4E-27 T 22-04-2016 IPR003711 CarD-like/TRCF domain RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 Pfam PF00271 Helicase conserved C-terminal domain 802 907 9.7E-17 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 SUPERFAMILY SSF141259 470 546 7.32E-23 T 22-04-2016 IPR003711 CarD-like/TRCF domain RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 SUPERFAMILY SSF52540 781 988 6.81E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 PANTHER PTHR14025:SF21 381 1123 0.0 T 22-04-2016 RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 SMART SM00487 598 788 1.6E-32 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC12D_RS07915 ac14748f7e61ad61bf03a8c13d2bb735 1143 SMART SM00490 824 908 1.4E-15 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS05035 2f849b350501fbaacdb8df7232abb80c 237 SMART SM00862 151 227 7.6E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS05035 2f849b350501fbaacdb8df7232abb80c 237 SMART SM00448 3 115 5.6E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS05035 2f849b350501fbaacdb8df7232abb80c 237 Gene3D G3DSA:3.40.50.2300 2 124 6.9E-35 T 22-04-2016 RPIC12D_RS05035 2f849b350501fbaacdb8df7232abb80c 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 227 5.3E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS05035 2f849b350501fbaacdb8df7232abb80c 237 PANTHER PTHR26402:SF316 3 228 4.8E-61 T 22-04-2016 RPIC12D_RS05035 2f849b350501fbaacdb8df7232abb80c 237 SUPERFAMILY SSF52172 3 182 1.42E-34 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS05035 2f849b350501fbaacdb8df7232abb80c 237 Gene3D G3DSA:1.10.10.10 130 229 5.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS05035 2f849b350501fbaacdb8df7232abb80c 237 PANTHER PTHR26402 3 228 4.8E-61 T 22-04-2016 RPIC12D_RS05035 2f849b350501fbaacdb8df7232abb80c 237 Pfam PF00072 Response regulator receiver domain 5 115 5.3E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS14415 4dafd4e469550fbd37aee8f808749051 374 PANTHER PTHR11751 13 372 3.4E-66 T 22-04-2016 RPIC12D_RS14415 4dafd4e469550fbd37aee8f808749051 374 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 20 366 7.9E-95 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RPIC12D_RS14415 4dafd4e469550fbd37aee8f808749051 374 PANTHER PTHR11751:SF398 13 372 3.4E-66 T 22-04-2016 RPIC12D_RS14415 4dafd4e469550fbd37aee8f808749051 374 Pfam PF00155 Aminotransferase class I and II 37 365 4.3E-43 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC12D_RS14415 4dafd4e469550fbd37aee8f808749051 374 Gene3D G3DSA:3.90.1150.10 271 370 4.4E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS14415 4dafd4e469550fbd37aee8f808749051 374 SUPERFAMILY SSF53383 21 366 9.9E-74 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS14415 4dafd4e469550fbd37aee8f808749051 374 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 18 370 55.175 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RPIC12D_RS14415 4dafd4e469550fbd37aee8f808749051 374 Gene3D G3DSA:3.40.640.10 51 270 6.7E-60 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS10575 ae20015d7a11c92485334992590560ea 584 SUPERFAMILY SSF50998 34 577 2.22E-162 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RPIC12D_RS10575 ae20015d7a11c92485334992590560ea 584 SMART SM00564 182 219 2.5 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC12D_RS10575 ae20015d7a11c92485334992590560ea 584 SMART SM00564 443 485 0.3 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC12D_RS10575 ae20015d7a11c92485334992590560ea 584 SMART SM00564 136 168 0.0095 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC12D_RS10575 ae20015d7a11c92485334992590560ea 584 SMART SM00564 286 313 17.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC12D_RS10575 ae20015d7a11c92485334992590560ea 584 SMART SM00564 88 119 1.2E-5 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC12D_RS10575 ae20015d7a11c92485334992590560ea 584 SMART SM00564 494 526 0.0017 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC12D_RS10575 ae20015d7a11c92485334992590560ea 584 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 25 554 6.8E-235 T 22-04-2016 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 RPIC12D_RS10575 ae20015d7a11c92485334992590560ea 584 PANTHER PTHR32303:SF2 241 358 9.1E-117 T 22-04-2016 RPIC12D_RS10575 ae20015d7a11c92485334992590560ea 584 PANTHER PTHR32303:SF2 399 581 9.1E-117 T 22-04-2016 RPIC12D_RS10575 ae20015d7a11c92485334992590560ea 584 PANTHER PTHR32303:SF2 1 221 9.1E-117 T 22-04-2016 RPIC12D_RS10575 ae20015d7a11c92485334992590560ea 584 Pfam PF01011 PQQ enzyme repeat 501 536 4.0E-9 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat RPIC12D_RS10575 ae20015d7a11c92485334992590560ea 584 Gene3D G3DSA:2.140.10.10 16 583 3.6E-153 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RPIC12D_RS10575 ae20015d7a11c92485334992590560ea 584 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 261 282 - T 22-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 RPIC12D_RS10575 ae20015d7a11c92485334992590560ea 584 Pfam PF13360 PQQ-like domain 72 224 3.3E-16 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat RPIC12D_RS10575 ae20015d7a11c92485334992590560ea 584 PANTHER PTHR32303 241 358 9.1E-117 T 22-04-2016 RPIC12D_RS10575 ae20015d7a11c92485334992590560ea 584 PANTHER PTHR32303 399 581 9.1E-117 T 22-04-2016 RPIC12D_RS10575 ae20015d7a11c92485334992590560ea 584 PANTHER PTHR32303 1 221 9.1E-117 T 22-04-2016 RPIC12D_RS09075 47008a3f4b901687d546d2a91213936d 136 SUPERFAMILY SSF50346 39 131 1.29E-16 T 22-04-2016 IPR011033 PRC-barrel-like RPIC12D_RS09075 47008a3f4b901687d546d2a91213936d 136 Pfam PF05239 PRC-barrel domain 50 112 1.0E-12 T 22-04-2016 IPR027275 PRC-barrel domain RPIC12D_RS09075 47008a3f4b901687d546d2a91213936d 136 PANTHER PTHR36505 4 131 1.6E-16 T 22-04-2016 RPIC12D_RS09075 47008a3f4b901687d546d2a91213936d 136 PANTHER PTHR36505:SF2 4 131 1.6E-16 T 22-04-2016 RPIC12D_RS09075 47008a3f4b901687d546d2a91213936d 136 Gene3D G3DSA:2.30.30.240 49 111 1.7E-11 T 22-04-2016 RPIC12D_RS03850 afea91ccd2283f2750ab1f798662aabc 397 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 231 6.2E-21 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC12D_RS03850 afea91ccd2283f2750ab1f798662aabc 397 PANTHER PTHR10909:SF307 4 396 2.7E-272 T 22-04-2016 RPIC12D_RS03850 afea91ccd2283f2750ab1f798662aabc 397 Gene3D G3DSA:1.10.540.10 6 134 4.0E-43 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS03850 afea91ccd2283f2750ab1f798662aabc 397 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 244 389 8.4E-27 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS03850 afea91ccd2283f2750ab1f798662aabc 397 SUPERFAMILY SSF47203 246 394 6.12E-42 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS03850 afea91ccd2283f2750ab1f798662aabc 397 Gene3D G3DSA:1.20.140.10 232 392 2.3E-43 T 22-04-2016 RPIC12D_RS03850 afea91ccd2283f2750ab1f798662aabc 397 PANTHER PTHR10909 4 396 2.7E-272 T 22-04-2016 RPIC12D_RS03850 afea91ccd2283f2750ab1f798662aabc 397 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 349 368 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RPIC12D_RS03850 afea91ccd2283f2750ab1f798662aabc 397 Gene3D G3DSA:2.40.110.10 135 231 1.0E-31 T 22-04-2016 RPIC12D_RS03850 afea91ccd2283f2750ab1f798662aabc 397 SUPERFAMILY SSF56645 6 242 4.06E-78 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC12D_RS03850 afea91ccd2283f2750ab1f798662aabc 397 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 132 2.2E-33 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS02435 b1d31d9ad01ac3d8d3a4c61e2434f4ac 867 Gene3D G3DSA:2.40.50.140 422 541 4.6E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS02435 b1d31d9ad01ac3d8d3a4c61e2434f4ac 867 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 243 849 1.5E-222 T 22-04-2016 IPR014143 DNA ligase D RPIC12D_RS02435 b1d31d9ad01ac3d8d3a4c61e2434f4ac 867 SUPERFAMILY SSF56091 217 420 5.04E-47 T 22-04-2016 RPIC12D_RS02435 b1d31d9ad01ac3d8d3a4c61e2434f4ac 867 Gene3D G3DSA:3.30.470.30 257 366 1.5E-30 T 22-04-2016 RPIC12D_RS02435 b1d31d9ad01ac3d8d3a4c61e2434f4ac 867 SUPERFAMILY SSF50249 422 542 2.0E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS02435 b1d31d9ad01ac3d8d3a4c61e2434f4ac 867 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 5 167 6.7E-72 T 22-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain RPIC12D_RS02435 b1d31d9ad01ac3d8d3a4c61e2434f4ac 867 Pfam PF13298 DNA polymerase Ligase (LigD) 41 145 1.6E-41 T 22-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain RPIC12D_RS02435 b1d31d9ad01ac3d8d3a4c61e2434f4ac 867 Pfam PF01068 ATP dependent DNA ligase domain 247 419 8.4E-27 T 22-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 RPIC12D_RS02435 b1d31d9ad01ac3d8d3a4c61e2434f4ac 867 PANTHER PTHR10459:SF70 228 700 2.5E-79 T 22-04-2016 RPIC12D_RS02435 b1d31d9ad01ac3d8d3a4c61e2434f4ac 867 Pfam PF04679 ATP dependent DNA ligase C terminal region 438 533 5.5E-27 T 22-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 RPIC12D_RS02435 b1d31d9ad01ac3d8d3a4c61e2434f4ac 867 Gene3D G3DSA:3.30.1490.70 377 420 7.4E-17 T 22-04-2016 RPIC12D_RS02435 b1d31d9ad01ac3d8d3a4c61e2434f4ac 867 Gene3D G3DSA:3.30.1490.70 227 256 7.4E-17 T 22-04-2016 RPIC12D_RS02435 b1d31d9ad01ac3d8d3a4c61e2434f4ac 867 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 574 820 6.3E-90 T 22-04-2016 IPR014145 DNA ligase D, polymerase domain RPIC12D_RS02435 b1d31d9ad01ac3d8d3a4c61e2434f4ac 867 PANTHER PTHR10459 228 700 2.5E-79 T 22-04-2016 RPIC12D_RS02435 b1d31d9ad01ac3d8d3a4c61e2434f4ac 867 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 234 539 7.6E-107 T 22-04-2016 IPR014146 DNA ligase D, ligase domain RPIC12D_RS12230 08f139801d4163361a516cc6728b3377 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 7.8E-67 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria RPIC12D_RS12230 08f139801d4163361a516cc6728b3377 222 Pfam PF03379 CcmB protein 6 219 1.4E-68 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12230 08f139801d4163361a516cc6728b3377 222 PANTHER PTHR30070:SF1 3 222 6.7E-53 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12230 08f139801d4163361a516cc6728b3377 222 PIRSF PIRSF002764 1 222 4.7E-75 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria RPIC12D_RS12230 08f139801d4163361a516cc6728b3377 222 PANTHER PTHR30070 3 222 6.7E-53 T 22-04-2016 RPIC12D_RS12230 08f139801d4163361a516cc6728b3377 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 5.6E-59 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12230 08f139801d4163361a516cc6728b3377 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 5.6E-59 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12230 08f139801d4163361a516cc6728b3377 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 134 157 5.6E-59 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12230 08f139801d4163361a516cc6728b3377 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 5.6E-59 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12230 08f139801d4163361a516cc6728b3377 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 5.6E-59 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12230 08f139801d4163361a516cc6728b3377 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 5.6E-59 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS08905 049c96f9b1bc34a1327ed46733673a86 155 SUPERFAMILY SSF47741 83 151 3.01E-28 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC12D_RS08905 049c96f9b1bc34a1327ed46733673a86 155 PANTHER PTHR11908 1 133 4.2E-30 T 22-04-2016 RPIC12D_RS08905 049c96f9b1bc34a1327ed46733673a86 155 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 57 8.6E-8 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS08905 049c96f9b1bc34a1327ed46733673a86 155 Pfam PF01799 [2Fe-2S] binding domain 71 144 5.7E-25 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC12D_RS08905 049c96f9b1bc34a1327ed46733673a86 155 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RPIC12D_RS08905 049c96f9b1bc34a1327ed46733673a86 155 Gene3D G3DSA:1.10.150.120 73 152 2.7E-28 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC12D_RS08905 049c96f9b1bc34a1327ed46733673a86 155 SUPERFAMILY SSF54292 2 76 7.6E-26 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS08905 049c96f9b1bc34a1327ed46733673a86 155 Gene3D G3DSA:3.10.20.30 2 72 1.5E-30 T 22-04-2016 IPR012675 Beta-grasp domain RPIC12D_RS12965 f4a828b5558411efa0aba6a021487511 358 PRINTS PR00184 Neisseria sp. porin signature 300 324 1.2E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS12965 f4a828b5558411efa0aba6a021487511 358 PRINTS PR00184 Neisseria sp. porin signature 165 182 1.2E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS12965 f4a828b5558411efa0aba6a021487511 358 PRINTS PR00184 Neisseria sp. porin signature 69 94 1.2E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS12965 f4a828b5558411efa0aba6a021487511 358 Gene3D G3DSA:2.40.160.10 31 358 3.7E-86 T 22-04-2016 IPR023614 Porin domain RPIC12D_RS12965 f4a828b5558411efa0aba6a021487511 358 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 303 320 2.7E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS12965 f4a828b5558411efa0aba6a021487511 358 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 110 120 2.7E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS12965 f4a828b5558411efa0aba6a021487511 358 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 166 177 2.7E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS12965 f4a828b5558411efa0aba6a021487511 358 Pfam PF13609 Gram-negative porin 20 328 1.2E-48 T 22-04-2016 RPIC12D_RS12965 f4a828b5558411efa0aba6a021487511 358 SUPERFAMILY SSF56935 31 358 2.88E-77 T 22-04-2016 RPIC12D_RS17020 64a96cc0372c39d39d2bbe30d8c95528 197 TIGRFAM TIGR02943 Sig70_famx1: RNA polymerase sigma-70 factor, TIGR02943 family 3 193 4.7E-74 T 22-04-2016 IPR014289 RNA polymerase sigma-24-related RPIC12D_RS17020 64a96cc0372c39d39d2bbe30d8c95528 197 PANTHER PTHR30173 8 185 2.8E-23 T 22-04-2016 RPIC12D_RS17020 64a96cc0372c39d39d2bbe30d8c95528 197 Pfam PF04542 Sigma-70 region 2 10 74 5.5E-11 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS17020 64a96cc0372c39d39d2bbe30d8c95528 197 Gene3D G3DSA:1.10.10.10 123 186 8.0E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS17020 64a96cc0372c39d39d2bbe30d8c95528 197 SUPERFAMILY SSF88946 9 81 3.18E-14 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS17020 64a96cc0372c39d39d2bbe30d8c95528 197 Gene3D G3DSA:1.10.1740.10 9 95 1.8E-14 T 22-04-2016 RPIC12D_RS17020 64a96cc0372c39d39d2bbe30d8c95528 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 185 2.3E-20 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS17020 64a96cc0372c39d39d2bbe30d8c95528 197 PANTHER PTHR30173:SF24 8 185 2.8E-23 T 22-04-2016 RPIC12D_RS17020 64a96cc0372c39d39d2bbe30d8c95528 197 SUPERFAMILY SSF88659 117 185 1.38E-12 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS17020 64a96cc0372c39d39d2bbe30d8c95528 197 Pfam PF08281 Sigma-70, region 4 131 181 1.6E-10 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS07810 f7930fe1ab62c5e4274ec836d3369ec9 309 PANTHER PTHR30419 1 309 2.0E-77 T 22-04-2016 RPIC12D_RS07810 f7930fe1ab62c5e4274ec836d3369ec9 309 Gene3D G3DSA:1.10.10.10 4 88 8.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07810 f7930fe1ab62c5e4274ec836d3369ec9 309 Gene3D G3DSA:3.40.190.10 90 176 1.0E-21 T 22-04-2016 RPIC12D_RS07810 f7930fe1ab62c5e4274ec836d3369ec9 309 SUPERFAMILY SSF53850 90 295 3.96E-41 T 22-04-2016 RPIC12D_RS07810 f7930fe1ab62c5e4274ec836d3369ec9 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 8.8E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07810 f7930fe1ab62c5e4274ec836d3369ec9 309 Pfam PF03466 LysR substrate binding domain 89 293 3.3E-41 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS07810 f7930fe1ab62c5e4274ec836d3369ec9 309 Gene3D G3DSA:3.40.190.10 177 264 1.8E-20 T 22-04-2016 RPIC12D_RS07810 f7930fe1ab62c5e4274ec836d3369ec9 309 PANTHER PTHR30419:SF2 1 309 2.0E-77 T 22-04-2016 RPIC12D_RS07810 f7930fe1ab62c5e4274ec836d3369ec9 309 SUPERFAMILY SSF46785 2 113 1.31E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06015 5ae7c667bddf8d975e68946fd552b68f 59 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 44 1.7E-19 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type RPIC12D_RS06015 5ae7c667bddf8d975e68946fd552b68f 59 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 46 5.8E-16 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type RPIC12D_RS02430 9499badc67350df138d0a2fa707d0a2a 512 PANTHER PTHR30023:SF0 20 507 8.0E-70 T 22-04-2016 RPIC12D_RS02430 9499badc67350df138d0a2fa707d0a2a 512 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 61 505 3.5E-83 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIC12D_RS02430 9499badc67350df138d0a2fa707d0a2a 512 PANTHER PTHR30023 20 507 8.0E-70 T 22-04-2016 RPIC12D_RS02430 9499badc67350df138d0a2fa707d0a2a 512 Gene3D G3DSA:3.40.710.10 77 115 2.3E-4 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS02430 9499badc67350df138d0a2fa707d0a2a 512 SUPERFAMILY SSF56601 56 509 3.91E-97 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS02430 9499badc67350df138d0a2fa707d0a2a 512 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 87 488 6.5E-64 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIC12D_RS02430 9499badc67350df138d0a2fa707d0a2a 512 Gene3D G3DSA:3.40.710.10 271 508 1.7E-67 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS02430 9499badc67350df138d0a2fa707d0a2a 512 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 389 403 1.7E-22 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIC12D_RS02430 9499badc67350df138d0a2fa707d0a2a 512 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 331 353 1.7E-22 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIC12D_RS02430 9499badc67350df138d0a2fa707d0a2a 512 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 466 479 1.7E-22 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIC12D_RS02430 9499badc67350df138d0a2fa707d0a2a 512 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 404 418 1.7E-22 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIC12D_RS02430 9499badc67350df138d0a2fa707d0a2a 512 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 99 118 1.7E-22 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIC12D_RS09170 b23ac06fa1cbc3720e46fdadae6260d9 433 PANTHER PTHR11739 1 433 3.7E-200 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC12D_RS09170 b23ac06fa1cbc3720e46fdadae6260d9 433 SUPERFAMILY SSF48256 8 433 1.19E-163 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC12D_RS09170 b23ac06fa1cbc3720e46fdadae6260d9 433 Pfam PF00285 Citrate synthase, C-terminal domain 50 416 4.9E-132 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC12D_RS09170 b23ac06fa1cbc3720e46fdadae6260d9 433 ProSitePatterns PS00480 Citrate synthase signature. 307 319 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 RPIC12D_RS09170 b23ac06fa1cbc3720e46fdadae6260d9 433 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 18 427 3.9E-245 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 RPIC12D_RS09170 b23ac06fa1cbc3720e46fdadae6260d9 433 PANTHER PTHR11739:SF13 1 433 3.7E-200 T 22-04-2016 RPIC12D_RS09170 b23ac06fa1cbc3720e46fdadae6260d9 433 PIRSF PIRSF001369 41 433 1.5E-161 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 RPIC12D_RS09170 b23ac06fa1cbc3720e46fdadae6260d9 433 Gene3D G3DSA:1.10.580.10 56 284 7.0E-97 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 RPIC12D_RS09170 b23ac06fa1cbc3720e46fdadae6260d9 433 PRINTS PR00143 Citrate synthase signature 169 182 6.3E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC12D_RS09170 b23ac06fa1cbc3720e46fdadae6260d9 433 PRINTS PR00143 Citrate synthase signature 384 398 6.3E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC12D_RS09170 b23ac06fa1cbc3720e46fdadae6260d9 433 PRINTS PR00143 Citrate synthase signature 245 273 6.3E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC12D_RS09170 b23ac06fa1cbc3720e46fdadae6260d9 433 PRINTS PR00143 Citrate synthase signature 223 238 6.3E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC12D_RS09170 b23ac06fa1cbc3720e46fdadae6260d9 433 PRINTS PR00143 Citrate synthase signature 364 380 6.3E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC12D_RS09170 b23ac06fa1cbc3720e46fdadae6260d9 433 PRINTS PR00143 Citrate synthase signature 300 320 6.3E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC12D_RS09170 b23ac06fa1cbc3720e46fdadae6260d9 433 Gene3D G3DSA:1.10.230.10 285 378 3.8E-42 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain RPIC12D_RS08705 76fe208136ddf3f4f281b208cff116ab 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 8.1E-10 T 22-04-2016 RPIC12D_RS08705 76fe208136ddf3f4f281b208cff116ab 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 348 361 8.1E-10 T 22-04-2016 RPIC12D_RS08705 76fe208136ddf3f4f281b208cff116ab 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 263 274 8.1E-10 T 22-04-2016 RPIC12D_RS08705 76fe208136ddf3f4f281b208cff116ab 378 SUPERFAMILY SSF52021 7 152 4.71E-56 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08705 76fe208136ddf3f4f281b208cff116ab 378 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 6 377 47.933 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08705 76fe208136ddf3f4f281b208cff116ab 378 SUPERFAMILY SSF52317 156 374 5.66E-63 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS08705 76fe208136ddf3f4f281b208cff116ab 378 Pfam PF00117 Glutamine amidotransferase class-I 196 371 4.7E-46 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RPIC12D_RS08705 76fe208136ddf3f4f281b208cff116ab 378 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 8 374 3.6E-145 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08705 76fe208136ddf3f4f281b208cff116ab 378 PANTHER PTHR11405 6 378 1.3E-229 T 22-04-2016 RPIC12D_RS08705 76fe208136ddf3f4f281b208cff116ab 378 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 8 135 3.1E-51 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08705 76fe208136ddf3f4f281b208cff116ab 378 Gene3D G3DSA:3.50.30.20 8 145 2.9E-60 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08705 76fe208136ddf3f4f281b208cff116ab 378 Gene3D G3DSA:3.40.50.880 156 375 2.0E-80 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS08705 76fe208136ddf3f4f281b208cff116ab 378 SMART SM01097 6 136 4.4E-87 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08705 76fe208136ddf3f4f281b208cff116ab 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 263 279 1.0E-38 T 22-04-2016 RPIC12D_RS08705 76fe208136ddf3f4f281b208cff116ab 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 1.0E-38 T 22-04-2016 RPIC12D_RS08705 76fe208136ddf3f4f281b208cff116ab 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 1.0E-38 T 22-04-2016 RPIC12D_RS08705 76fe208136ddf3f4f281b208cff116ab 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 297 1.0E-38 T 22-04-2016 RPIC12D_RS08705 76fe208136ddf3f4f281b208cff116ab 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 305 316 1.0E-38 T 22-04-2016 RPIC12D_RS05510 6e7f0fabf950695a54d39e44e081b526 272 PANTHER PTHR34990:SF1 8 247 5.0E-72 T 22-04-2016 RPIC12D_RS05510 6e7f0fabf950695a54d39e44e081b526 272 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 24 251 3.6E-72 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 RPIC12D_RS05510 6e7f0fabf950695a54d39e44e081b526 272 PANTHER PTHR34990 8 247 5.0E-72 T 22-04-2016 RPIC12D_RS05510 6e7f0fabf950695a54d39e44e081b526 272 Pfam PF00149 Calcineurin-like phosphoesterase 22 230 2.5E-7 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RPIC12D_RS05510 6e7f0fabf950695a54d39e44e081b526 272 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 272 99.328 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 RPIC12D_RS05510 6e7f0fabf950695a54d39e44e081b526 272 Gene3D G3DSA:3.60.21.10 23 147 2.3E-18 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS05510 6e7f0fabf950695a54d39e44e081b526 272 Gene3D G3DSA:3.60.21.10 204 242 2.3E-18 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS05510 6e7f0fabf950695a54d39e44e081b526 272 SUPERFAMILY SSF56300 23 253 8.39E-25 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS11200 2597cd7bec367243b3a2508954363dc2 181 Pfam PF06073 Bacterial protein of unknown function (DUF934) 65 171 2.0E-41 T 22-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 RPIC12D_RS11200 2597cd7bec367243b3a2508954363dc2 181 PIRSF PIRSF030820 1 180 1.8E-65 T 22-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 RPIC12D_RS15715 96379bdb38f38f4d8a2e6b5ce7fa4cbd 300 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 20 293 1.4E-65 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS15715 96379bdb38f38f4d8a2e6b5ce7fa4cbd 300 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 97 108 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS15715 96379bdb38f38f4d8a2e6b5ce7fa4cbd 300 SUPERFAMILY SSF53790 18 241 3.93E-68 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RPIC12D_RS15715 96379bdb38f38f4d8a2e6b5ce7fa4cbd 300 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 20 222 9.6E-30 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RPIC12D_RS15715 96379bdb38f38f4d8a2e6b5ce7fa4cbd 300 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 19 243 32.752 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS15715 96379bdb38f38f4d8a2e6b5ce7fa4cbd 300 Gene3D G3DSA:3.30.950.10 128 244 6.8E-34 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RPIC12D_RS15715 96379bdb38f38f4d8a2e6b5ce7fa4cbd 300 PIRSF PIRSF005917 9 297 2.3E-89 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS15715 96379bdb38f38f4d8a2e6b5ce7fa4cbd 300 PANTHER PTHR21091:SF18 5 248 4.4E-64 T 22-04-2016 RPIC12D_RS15715 96379bdb38f38f4d8a2e6b5ce7fa4cbd 300 Gene3D G3DSA:3.40.1010.10 19 127 3.4E-10 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 RPIC12D_RS15715 96379bdb38f38f4d8a2e6b5ce7fa4cbd 300 PANTHER PTHR21091 5 248 4.4E-64 T 22-04-2016 RPIC12D_RS14090 1f3ad17df86f4743dee722cc05eb6dfd 340 PANTHER PTHR22888 1 277 3.9E-140 T 22-04-2016 RPIC12D_RS14090 1f3ad17df86f4743dee722cc05eb6dfd 340 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 26 249 2.0E-115 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 RPIC12D_RS14090 1f3ad17df86f4743dee722cc05eb6dfd 340 SUPERFAMILY SSF81464 30 128 8.01E-23 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RPIC12D_RS14090 1f3ad17df86f4743dee722cc05eb6dfd 340 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 159 230 6.5E-7 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 RPIC12D_RS14090 1f3ad17df86f4743dee722cc05eb6dfd 340 PANTHER PTHR22888:SF13 1 277 3.9E-140 T 22-04-2016 RPIC12D_RS14090 1f3ad17df86f4743dee722cc05eb6dfd 340 Gene3D G3DSA:2.60.40.420 125 290 3.1E-40 T 22-04-2016 IPR008972 Cupredoxin RPIC12D_RS14090 1f3ad17df86f4743dee722cc05eb6dfd 340 Gene3D G3DSA:1.10.287.90 39 124 4.7E-36 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RPIC12D_RS14090 1f3ad17df86f4743dee722cc05eb6dfd 340 Pfam PF06481 COX Aromatic Rich Motif 249 294 6.0E-17 T 22-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 RPIC12D_RS14090 1f3ad17df86f4743dee722cc05eb6dfd 340 PIRSF PIRSF000292 12 320 1.2E-132 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 RPIC12D_RS14090 1f3ad17df86f4743dee722cc05eb6dfd 340 SUPERFAMILY SSF49503 130 291 1.44E-48 T 22-04-2016 IPR008972 Cupredoxin RPIC12D_RS11150 44eb9325925f45c55c1fd01710ce4268 142 Gene3D G3DSA:3.40.50.10110 1 138 9.3E-39 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RPIC12D_RS11150 44eb9325925f45c55c1fd01710ce4268 142 PANTHER PTHR38767 7 142 1.3E-20 T 22-04-2016 RPIC12D_RS11150 44eb9325925f45c55c1fd01710ce4268 142 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 135 1.1E-37 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RPIC12D_RS11150 44eb9325925f45c55c1fd01710ce4268 142 SUPERFAMILY SSF102400 1 139 2.35E-40 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RPIC12D_RS08420 c6e46c614971df4273918ed2a7439e0a 186 SUPERFAMILY SSF103088 53 168 4.19E-28 T 22-04-2016 IPR006665 OmpA-like domain RPIC12D_RS08420 c6e46c614971df4273918ed2a7439e0a 186 Pfam PF00691 OmpA family 66 162 5.5E-19 T 22-04-2016 IPR006665 OmpA-like domain RPIC12D_RS08420 c6e46c614971df4273918ed2a7439e0a 186 Gene3D G3DSA:3.30.1330.60 49 168 8.8E-30 T 22-04-2016 IPR006665 OmpA-like domain RPIC12D_RS08420 c6e46c614971df4273918ed2a7439e0a 186 PANTHER PTHR30128 52 172 5.6E-28 T 22-04-2016 RPIC12D_RS08420 c6e46c614971df4273918ed2a7439e0a 186 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 131 150 3.0E-5 T 22-04-2016 RPIC12D_RS08420 c6e46c614971df4273918ed2a7439e0a 186 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 151 171 3.0E-5 T 22-04-2016 RPIC12D_RS08420 c6e46c614971df4273918ed2a7439e0a 186 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 33 52 3.0E-5 T 22-04-2016 RPIC12D_RS15820 b95872f8c651ed6e7ba52103a012b4c5 362 Pfam PF13458 Periplasmic binding protein 31 341 2.5E-30 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC12D_RS15820 b95872f8c651ed6e7ba52103a012b4c5 362 Gene3D G3DSA:3.40.50.2300 25 147 3.8E-18 T 22-04-2016 RPIC12D_RS15820 b95872f8c651ed6e7ba52103a012b4c5 362 Gene3D G3DSA:3.40.50.2300 283 331 3.8E-18 T 22-04-2016 RPIC12D_RS15820 b95872f8c651ed6e7ba52103a012b4c5 362 SUPERFAMILY SSF53822 30 354 5.42E-37 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS10200 da6a62ef55f6f12fe5c868dfaa0682c0 531 Pfam PF11170 Protein of unknown function (DUF2957) 90 528 2.2E-146 T 22-04-2016 IPR021340 Protein of unknown function DUF2957 RPIC12D_RS04840 aaa0ab6e198fc7bb83728d2b3d6c03cd 204 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 7 197 8.7E-66 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 RPIC12D_RS04840 aaa0ab6e198fc7bb83728d2b3d6c03cd 204 SUPERFAMILY SSF53448 6 197 2.48E-29 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS04840 aaa0ab6e198fc7bb83728d2b3d6c03cd 204 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 200 27.729 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 RPIC12D_RS04840 aaa0ab6e198fc7bb83728d2b3d6c03cd 204 Pfam PF12804 MobA-like NTP transferase domain 9 158 1.5E-31 T 22-04-2016 IPR025877 MobA-like NTP transferase RPIC12D_RS04840 aaa0ab6e198fc7bb83728d2b3d6c03cd 204 PANTHER PTHR19136 1 204 1.3E-34 T 22-04-2016 RPIC12D_RS04840 aaa0ab6e198fc7bb83728d2b3d6c03cd 204 PANTHER PTHR19136:SF81 1 204 1.3E-34 T 22-04-2016 RPIC12D_RS04840 aaa0ab6e198fc7bb83728d2b3d6c03cd 204 Gene3D G3DSA:3.90.550.10 4 202 2.3E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS12835 23a4517d8449dc549be9ab205c475be6 345 Pfam PF00072 Response regulator receiver domain 97 159 4.8E-8 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS12835 23a4517d8449dc549be9ab205c475be6 345 SUPERFAMILY SSF52172 17 54 5.12E-13 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS12835 23a4517d8449dc549be9ab205c475be6 345 SUPERFAMILY SSF52172 100 174 5.12E-13 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS12835 23a4517d8449dc549be9ab205c475be6 345 Gene3D G3DSA:3.40.50.2300 98 174 4.0E-16 T 22-04-2016 RPIC12D_RS12835 23a4517d8449dc549be9ab205c475be6 345 Gene3D G3DSA:3.40.50.2300 17 52 4.0E-16 T 22-04-2016 RPIC12D_RS12425 e7bab18d6106d13912fa4cb6499ed5a5 312 PANTHER PTHR20275 19 302 1.6E-86 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RPIC12D_RS12425 e7bab18d6106d13912fa4cb6499ed5a5 312 Hamap MF_00361 NAD kinase [nadK]. 22 302 32.454 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RPIC12D_RS12425 e7bab18d6106d13912fa4cb6499ed5a5 312 Pfam PF01513 ATP-NAD kinase 75 285 7.7E-58 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RPIC12D_RS12425 e7bab18d6106d13912fa4cb6499ed5a5 312 Gene3D G3DSA:2.60.200.30 164 276 1.2E-42 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RPIC12D_RS12425 e7bab18d6106d13912fa4cb6499ed5a5 312 Gene3D G3DSA:3.40.50.10330 19 163 6.3E-36 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RPIC12D_RS12425 e7bab18d6106d13912fa4cb6499ed5a5 312 SUPERFAMILY SSF111331 23 304 6.67E-87 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain RPIC12D_RS11910 0d9fc0ba9673e284e332db144a9f2148 402 SMART SM00471 156 292 1.0E-9 T 22-04-2016 IPR003607 HD/PDEase domain RPIC12D_RS11910 0d9fc0ba9673e284e332db144a9f2148 402 Gene3D G3DSA:1.10.3210.10 150 299 7.2E-23 T 22-04-2016 IPR006674 HD domain RPIC12D_RS11910 0d9fc0ba9673e284e332db144a9f2148 402 SUPERFAMILY SSF109604 152 321 2.92E-36 T 22-04-2016 RPIC12D_RS11910 0d9fc0ba9673e284e332db144a9f2148 402 Pfam PF11871 Domain of unknown function (DUF3391) 3 129 1.4E-35 T 22-04-2016 IPR021812 Protein of unknown function DUF3391 RPIC12D_RS11910 0d9fc0ba9673e284e332db144a9f2148 402 Pfam PF13487 HD domain 211 273 1.3E-12 T 22-04-2016 RPIC12D_RS07950 b9b18b0072320d4ac7dd891672c93aa5 453 PANTHER PTHR11918:SF57 7 453 4.9E-216 T 22-04-2016 RPIC12D_RS07950 b9b18b0072320d4ac7dd891672c93aa5 453 Gene3D G3DSA:3.80.30.20 143 386 3.7E-69 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RPIC12D_RS07950 b9b18b0072320d4ac7dd891672c93aa5 453 Gene3D G3DSA:2.40.50.140 389 453 2.4E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS07950 b9b18b0072320d4ac7dd891672c93aa5 453 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 149 169 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 RPIC12D_RS07950 b9b18b0072320d4ac7dd891672c93aa5 453 Pfam PF04055 Radical SAM superfamily 151 332 6.6E-30 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC12D_RS07950 b9b18b0072320d4ac7dd891672c93aa5 453 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 10 451 2.7E-168 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 RPIC12D_RS07950 b9b18b0072320d4ac7dd891672c93aa5 453 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 10 451 2.3E-95 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 RPIC12D_RS07950 b9b18b0072320d4ac7dd891672c93aa5 453 SMART SM00729 145 374 2.6E-51 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC12D_RS07950 b9b18b0072320d4ac7dd891672c93aa5 453 SUPERFAMILY SSF102114 122 378 1.96E-50 T 22-04-2016 RPIC12D_RS07950 b9b18b0072320d4ac7dd891672c93aa5 453 Pfam PF00919 Uncharacterized protein family UPF0004 10 89 9.5E-19 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 RPIC12D_RS07950 b9b18b0072320d4ac7dd891672c93aa5 453 PANTHER PTHR11918 7 453 4.9E-216 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein RPIC12D_RS07950 b9b18b0072320d4ac7dd891672c93aa5 453 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 9 453 60.172 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 RPIC12D_RS02475 513557d77f13ff570f3de518ec33e9eb 470 SMART SM00283 33 277 2.9E-8 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS02475 513557d77f13ff570f3de518ec33e9eb 470 PANTHER PTHR32089 15 297 5.7E-35 T 22-04-2016 RPIC12D_RS02475 513557d77f13ff570f3de518ec33e9eb 470 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 87 285 2.0E-21 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS02475 513557d77f13ff570f3de518ec33e9eb 470 SUPERFAMILY SSF58104 14 295 8.37E-41 T 22-04-2016 RPIC12D_RS02475 513557d77f13ff570f3de518ec33e9eb 470 Gene3D G3DSA:1.10.287.950 48 273 8.7E-35 T 22-04-2016 RPIC12D_RS02475 513557d77f13ff570f3de518ec33e9eb 470 PANTHER PTHR32089:SF53 15 297 5.7E-35 T 22-04-2016 RPIC12D_RS14630 d3fe1da17b9b8a55df84c8b35b9f5451 326 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 249 306 7.9E-25 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS14630 d3fe1da17b9b8a55df84c8b35b9f5451 326 PANTHER PTHR32108 6 326 2.3E-139 T 22-04-2016 RPIC12D_RS14630 d3fe1da17b9b8a55df84c8b35b9f5451 326 SUPERFAMILY SSF55257 175 228 5.0E-31 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS14630 d3fe1da17b9b8a55df84c8b35b9f5451 326 SUPERFAMILY SSF55257 5 50 5.0E-31 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS14630 d3fe1da17b9b8a55df84c8b35b9f5451 326 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 2 315 35.357 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS14630 d3fe1da17b9b8a55df84c8b35b9f5451 326 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 324 6.0E-35 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS14630 d3fe1da17b9b8a55df84c8b35b9f5451 326 Gene3D G3DSA:3.30.1360.10 5 63 1.1E-10 T 22-04-2016 RPIC12D_RS14630 d3fe1da17b9b8a55df84c8b35b9f5451 326 Gene3D G3DSA:3.30.1360.10 176 227 2.2E-7 T 22-04-2016 RPIC12D_RS14630 d3fe1da17b9b8a55df84c8b35b9f5451 326 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 61 150 8.9E-24 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14630 d3fe1da17b9b8a55df84c8b35b9f5451 326 SUPERFAMILY SSF56553 50 173 2.35E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14630 d3fe1da17b9b8a55df84c8b35b9f5451 326 PANTHER PTHR32108:SF0 6 326 2.3E-139 T 22-04-2016 RPIC12D_RS14630 d3fe1da17b9b8a55df84c8b35b9f5451 326 SUPERFAMILY SSF47789 249 322 4.58E-27 T 22-04-2016 RPIC12D_RS14630 d3fe1da17b9b8a55df84c8b35b9f5451 326 SMART SM00662 20 230 1.6E-94 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14630 d3fe1da17b9b8a55df84c8b35b9f5451 326 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 224 2.4E-22 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS14630 d3fe1da17b9b8a55df84c8b35b9f5451 326 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 21 314 2.0E-106 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS14630 d3fe1da17b9b8a55df84c8b35b9f5451 326 Gene3D G3DSA:2.170.120.12 64 173 1.5E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14630 d3fe1da17b9b8a55df84c8b35b9f5451 326 Gene3D G3DSA:1.10.150.20 245 322 1.6E-36 T 22-04-2016 RPIC12D_RS09435 afbff3a7d50614be1c2d36f3d1e444a5 398 Gene3D G3DSA:2.40.110.10 124 231 2.6E-38 T 22-04-2016 RPIC12D_RS09435 afbff3a7d50614be1c2d36f3d1e444a5 398 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 219 6.7E-21 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC12D_RS09435 afbff3a7d50614be1c2d36f3d1e444a5 398 Gene3D G3DSA:1.20.140.10 232 396 5.8E-31 T 22-04-2016 RPIC12D_RS09435 afbff3a7d50614be1c2d36f3d1e444a5 398 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 119 2.4E-21 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS09435 afbff3a7d50614be1c2d36f3d1e444a5 398 PANTHER PTHR10909 366 398 5.7E-159 T 22-04-2016 RPIC12D_RS09435 afbff3a7d50614be1c2d36f3d1e444a5 398 PANTHER PTHR10909 1 347 5.7E-159 T 22-04-2016 RPIC12D_RS09435 afbff3a7d50614be1c2d36f3d1e444a5 398 PANTHER PTHR10909:SF229 366 398 5.7E-159 T 22-04-2016 RPIC12D_RS09435 afbff3a7d50614be1c2d36f3d1e444a5 398 PANTHER PTHR10909:SF229 1 347 5.7E-159 T 22-04-2016 RPIC12D_RS09435 afbff3a7d50614be1c2d36f3d1e444a5 398 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 395 3.6E-24 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS09435 afbff3a7d50614be1c2d36f3d1e444a5 398 SUPERFAMILY SSF47203 231 397 1.24E-24 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS09435 afbff3a7d50614be1c2d36f3d1e444a5 398 SUPERFAMILY SSF56645 2 244 1.7E-76 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC12D_RS09435 afbff3a7d50614be1c2d36f3d1e444a5 398 Gene3D G3DSA:1.10.540.10 1 119 1.8E-26 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS08325 5fce8c97f5948595b9953d0e43c72cf9 181 Gene3D G3DSA:1.10.10.10 123 180 3.2E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08325 5fce8c97f5948595b9953d0e43c72cf9 181 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 102 1.4E-10 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS08325 5fce8c97f5948595b9953d0e43c72cf9 181 SMART SM00091 4 70 0.003 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS08325 5fce8c97f5948595b9953d0e43c72cf9 181 PANTHER PTHR26402:SF613 122 179 7.8E-13 T 22-04-2016 RPIC12D_RS08325 5fce8c97f5948595b9953d0e43c72cf9 181 SUPERFAMILY SSF46894 109 180 8.16E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS08325 5fce8c97f5948595b9953d0e43c72cf9 181 Pfam PF13426 PAS domain 14 115 7.8E-11 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS08325 5fce8c97f5948595b9953d0e43c72cf9 181 Pfam PF00196 Bacterial regulatory proteins, luxR family 123 175 6.0E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS08325 5fce8c97f5948595b9953d0e43c72cf9 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 154 1.7E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS08325 5fce8c97f5948595b9953d0e43c72cf9 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 166 1.7E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS08325 5fce8c97f5948595b9953d0e43c72cf9 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 124 138 1.7E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS08325 5fce8c97f5948595b9953d0e43c72cf9 181 PANTHER PTHR26402 122 179 7.8E-13 T 22-04-2016 RPIC12D_RS08325 5fce8c97f5948595b9953d0e43c72cf9 181 SUPERFAMILY SSF55785 6 113 1.2E-13 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS08325 5fce8c97f5948595b9953d0e43c72cf9 181 SMART SM00421 121 178 8.1E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS08325 5fce8c97f5948595b9953d0e43c72cf9 181 ProSitePatterns PS00622 LuxR-type HTH domain signature. 138 165 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS08325 5fce8c97f5948595b9953d0e43c72cf9 181 Gene3D G3DSA:3.30.450.20 6 114 7.4E-13 T 22-04-2016 RPIC12D_RS06680 c253a247c4ecb91d8051fced87273249 275 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 274 6.3E-146 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RPIC12D_RS06680 c253a247c4ecb91d8051fced87273249 275 Gene3D G3DSA:1.10.166.10 2 70 1.2E-31 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RPIC12D_RS06680 c253a247c4ecb91d8051fced87273249 275 PANTHER PTHR19136 15 273 2.1E-127 T 22-04-2016 RPIC12D_RS06680 c253a247c4ecb91d8051fced87273249 275 Gene3D G3DSA:2.160.10.10 91 257 1.0E-61 T 22-04-2016 RPIC12D_RS06680 c253a247c4ecb91d8051fced87273249 275 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 274 56.919 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RPIC12D_RS06680 c253a247c4ecb91d8051fced87273249 275 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 70 4.5E-27 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RPIC12D_RS06680 c253a247c4ecb91d8051fced87273249 275 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 177 211 1.1E-13 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC12D_RS06680 c253a247c4ecb91d8051fced87273249 275 PANTHER PTHR19136:SF52 15 273 2.1E-127 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RPIC12D_RS06680 c253a247c4ecb91d8051fced87273249 275 SUPERFAMILY SSF51161 3 258 3.47E-74 T 22-04-2016 IPR011004 Trimeric LpxA-like RPIC12D_RS06680 c253a247c4ecb91d8051fced87273249 275 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RPIC12D_RS06680 c253a247c4ecb91d8051fced87273249 275 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 135 168 0.0019 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC12D_RS12005 774dae845c947599903120f37a120d73 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 5.3E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS12005 774dae845c947599903120f37a120d73 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 5.3E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS12005 774dae845c947599903120f37a120d73 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 5.3E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS12005 774dae845c947599903120f37a120d73 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 5.3E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS12005 774dae845c947599903120f37a120d73 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 5.3E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS12005 774dae845c947599903120f37a120d73 192 PANTHER PTHR11404 1 192 6.4E-113 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS12005 774dae845c947599903120f37a120d73 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 1.4E-42 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS12005 774dae845c947599903120f37a120d73 192 SUPERFAMILY SSF54719 82 191 9.3E-47 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS12005 774dae845c947599903120f37a120d73 192 PIRSF PIRSF000349 1 192 6.5E-90 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS12005 774dae845c947599903120f37a120d73 192 PANTHER PTHR11404:SF8 1 192 6.4E-113 T 22-04-2016 RPIC12D_RS12005 774dae845c947599903120f37a120d73 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 81 1.2E-34 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS12005 774dae845c947599903120f37a120d73 192 SUPERFAMILY SSF46609 1 84 2.49E-36 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS12005 774dae845c947599903120f37a120d73 192 Gene3D G3DSA:1.10.287.990 20 82 5.6E-25 T 22-04-2016 RPIC12D_RS12005 774dae845c947599903120f37a120d73 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC12D_RS03005 6d9dc8dda5ec6263da5fa43f1ff5e55e 478 Pfam PF02321 Outer membrane efflux protein 35 220 4.0E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC12D_RS03005 6d9dc8dda5ec6263da5fa43f1ff5e55e 478 Pfam PF02321 Outer membrane efflux protein 245 433 4.5E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC12D_RS03005 6d9dc8dda5ec6263da5fa43f1ff5e55e 478 SUPERFAMILY SSF56954 33 448 4.45E-89 T 22-04-2016 RPIC12D_RS03005 6d9dc8dda5ec6263da5fa43f1ff5e55e 478 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 30 448 8.3E-98 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 RPIC12D_RS03005 6d9dc8dda5ec6263da5fa43f1ff5e55e 478 PANTHER PTHR30026:SF3 25 460 4.7E-91 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 RPIC12D_RS03005 6d9dc8dda5ec6263da5fa43f1ff5e55e 478 PANTHER PTHR30026 25 460 4.7E-91 T 22-04-2016 RPIC12D_RS03005 6d9dc8dda5ec6263da5fa43f1ff5e55e 478 Gene3D G3DSA:1.20.1600.10 29 441 1.6E-79 T 22-04-2016 RPIC12D_RS00560 b0dcd57c71219f462504bda8c9a32248 539 Gene3D G3DSA:3.90.226.10 280 526 1.4E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS00560 b0dcd57c71219f462504bda8c9a32248 539 Gene3D G3DSA:3.90.226.10 39 271 1.4E-50 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS00560 b0dcd57c71219f462504bda8c9a32248 539 Pfam PF01039 Carboxyl transferase domain 49 526 1.9E-110 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS00560 b0dcd57c71219f462504bda8c9a32248 539 PANTHER PTHR22855:SF29 15 539 2.1E-285 T 22-04-2016 RPIC12D_RS00560 b0dcd57c71219f462504bda8c9a32248 539 SUPERFAMILY SSF52096 39 270 6.97E-53 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS00560 b0dcd57c71219f462504bda8c9a32248 539 SUPERFAMILY SSF52096 238 518 1.22E-76 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS00560 b0dcd57c71219f462504bda8c9a32248 539 PANTHER PTHR22855 15 539 2.1E-285 T 22-04-2016 RPIC12D_RS06245 2d1a63bb89975b173c4870f6ff65ff5e 122 PANTHER PTHR21011 1 121 7.6E-38 T 22-04-2016 RPIC12D_RS06245 2d1a63bb89975b173c4870f6ff65ff5e 122 PANTHER PTHR21011:SF1 1 121 7.6E-38 T 22-04-2016 RPIC12D_RS06245 2d1a63bb89975b173c4870f6ff65ff5e 122 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.785 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS06245 2d1a63bb89975b173c4870f6ff65ff5e 122 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 5.5E-33 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS06245 2d1a63bb89975b173c4870f6ff65ff5e 122 SUPERFAMILY SSF54995 1 104 1.16E-36 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS06245 2d1a63bb89975b173c4870f6ff65ff5e 122 Pfam PF01250 Ribosomal protein S6 3 90 8.7E-28 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS06245 2d1a63bb89975b173c4870f6ff65ff5e 122 Gene3D G3DSA:3.30.70.60 1 104 5.1E-42 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RPIC12D_RS12390 5a2b3188271b1352976e80cef1891f60 518 PANTHER PTHR10362 9 504 1.3E-233 T 22-04-2016 RPIC12D_RS12390 5a2b3188271b1352976e80cef1891f60 518 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 10 508 2.2E-208 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC12D_RS12390 5a2b3188271b1352976e80cef1891f60 518 PANTHER PTHR10362:SF7 9 504 1.3E-233 T 22-04-2016 RPIC12D_RS12390 5a2b3188271b1352976e80cef1891f60 518 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 9 510 45.72 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC12D_RS12390 5a2b3188271b1352976e80cef1891f60 518 SUPERFAMILY SSF48557 3 504 1.26E-185 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 RPIC12D_RS12390 5a2b3188271b1352976e80cef1891f60 518 Pfam PF00221 Aromatic amino acid lyase 20 476 3.4E-182 T 22-04-2016 IPR001106 Aromatic amino acid lyase RPIC12D_RS12390 5a2b3188271b1352976e80cef1891f60 518 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 145 161 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 RPIC12D_RS12390 5a2b3188271b1352976e80cef1891f60 518 Gene3D G3DSA:1.20.200.10 204 510 8.8E-125 T 22-04-2016 RPIC12D_RS12390 5a2b3188271b1352976e80cef1891f60 518 Gene3D G3DSA:1.10.275.10 3 203 3.0E-69 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal RPIC12D_RS07745 6597e5deb95d4434ce9b4c2f65ef039d 395 PANTHER PTHR24023 81 211 4.2E-21 T 22-04-2016 RPIC12D_RS07745 6597e5deb95d4434ce9b4c2f65ef039d 395 Pfam PF02515 CoA-transferase family III 8 371 4.2E-122 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RPIC12D_RS07745 6597e5deb95d4434ce9b4c2f65ef039d 395 SUPERFAMILY SSF89796 6 393 3.01E-127 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS07745 6597e5deb95d4434ce9b4c2f65ef039d 395 Gene3D G3DSA:3.40.50.10540 309 394 3.2E-105 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS07745 6597e5deb95d4434ce9b4c2f65ef039d 395 Gene3D G3DSA:3.40.50.10540 5 220 3.2E-105 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS07745 6597e5deb95d4434ce9b4c2f65ef039d 395 Gene3D G3DSA:3.30.1540.10 226 308 6.8E-29 T 22-04-2016 RPIC12D_RS07745 6597e5deb95d4434ce9b4c2f65ef039d 395 PANTHER PTHR24023:SF593 81 211 4.2E-21 T 22-04-2016 RPIC12D_RS07505 2fe85c45dd42c2c63397a6ff6c00fd0f 542 Gene3D G3DSA:3.30.300.30 433 531 1.9E-23 T 22-04-2016 RPIC12D_RS07505 2fe85c45dd42c2c63397a6ff6c00fd0f 542 SUPERFAMILY SSF56801 13 534 7.46E-132 T 22-04-2016 RPIC12D_RS07505 2fe85c45dd42c2c63397a6ff6c00fd0f 542 Gene3D G3DSA:2.30.38.10 359 432 4.2E-17 T 22-04-2016 RPIC12D_RS07505 2fe85c45dd42c2c63397a6ff6c00fd0f 542 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC12D_RS07505 2fe85c45dd42c2c63397a6ff6c00fd0f 542 Gene3D G3DSA:3.40.50.980 191 339 2.5E-32 T 22-04-2016 RPIC12D_RS07505 2fe85c45dd42c2c63397a6ff6c00fd0f 542 PANTHER PTHR24096:SF53 3 536 8.0E-238 T 22-04-2016 RPIC12D_RS07505 2fe85c45dd42c2c63397a6ff6c00fd0f 542 Pfam PF00501 AMP-binding enzyme 19 438 4.1E-85 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC12D_RS07505 2fe85c45dd42c2c63397a6ff6c00fd0f 542 Gene3D G3DSA:3.40.50.980 14 190 1.5E-30 T 22-04-2016 RPIC12D_RS07505 2fe85c45dd42c2c63397a6ff6c00fd0f 542 PANTHER PTHR24096 3 536 8.0E-238 T 22-04-2016 RPIC12D_RS07505 2fe85c45dd42c2c63397a6ff6c00fd0f 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 522 3.6E-11 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC12D_RS05685 d2d987f11f0c6cd1c08ddcad712abf7d 206 SMART SM00493 84 173 4.7E-11 T 22-04-2016 IPR006171 Toprim domain RPIC12D_RS05685 d2d987f11f0c6cd1c08ddcad712abf7d 206 PANTHER PTHR30446 7 206 1.1E-93 T 22-04-2016 RPIC12D_RS05685 d2d987f11f0c6cd1c08ddcad712abf7d 206 Pfam PF13662 Toprim domain 84 179 9.1E-22 T 22-04-2016 IPR006171 Toprim domain RPIC12D_RS05685 d2d987f11f0c6cd1c08ddcad712abf7d 206 Pfam PF02132 RecR protein 44 82 1.5E-15 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger RPIC12D_RS05685 d2d987f11f0c6cd1c08ddcad712abf7d 206 TIGRFAM TIGR00615 recR: recombination protein RecR 8 204 1.0E-69 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RPIC12D_RS05685 d2d987f11f0c6cd1c08ddcad712abf7d 206 SUPERFAMILY SSF111304 8 206 3.4E-73 T 22-04-2016 IPR023627 Recombination protein RecR RPIC12D_RS05685 d2d987f11f0c6cd1c08ddcad712abf7d 206 PANTHER PTHR30446:SF0 7 206 1.1E-93 T 22-04-2016 RPIC12D_RS05685 d2d987f11f0c6cd1c08ddcad712abf7d 206 Hamap MF_00017 Recombination protein RecR [recR]. 1 206 96.55 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RPIC12D_RS07485 d10c1e428420897cc4831f4f7b0280c0 262 PANTHER PTHR24220 13 253 1.4E-89 T 22-04-2016 RPIC12D_RS07485 d10c1e428420897cc4831f4f7b0280c0 262 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 230 252 2.5E-9 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RPIC12D_RS07485 d10c1e428420897cc4831f4f7b0280c0 262 SUPERFAMILY SSF52540 11 252 1.01E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07485 d10c1e428420897cc4831f4f7b0280c0 262 Pfam PF00005 ABC transporter 28 183 1.4E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS07485 d10c1e428420897cc4831f4f7b0280c0 262 Gene3D G3DSA:3.40.50.300 10 250 1.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07485 d10c1e428420897cc4831f4f7b0280c0 262 SMART SM00382 36 230 8.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS07485 d10c1e428420897cc4831f4f7b0280c0 262 PANTHER PTHR24220:SF358 13 253 1.4E-89 T 22-04-2016 RPIC12D_RS02065 e6c248585e1c83c7906e10d7a6e1ce1c 697 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 402 421 2.4E-31 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS02065 e6c248585e1c83c7906e10d7a6e1ce1c 697 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 254 269 2.4E-31 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS02065 e6c248585e1c83c7906e10d7a6e1ce1c 697 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 326 342 2.4E-31 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS02065 e6c248585e1c83c7906e10d7a6e1ce1c 697 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 2.4E-31 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS02065 e6c248585e1c83c7906e10d7a6e1ce1c 697 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 2.4E-31 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS02065 e6c248585e1c83c7906e10d7a6e1ce1c 697 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 695 24.757 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS02065 e6c248585e1c83c7906e10d7a6e1ce1c 697 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 558 1.9E-194 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS02065 e6c248585e1c83c7906e10d7a6e1ce1c 697 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 695 6.9E-200 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC12D_RS02065 e6c248585e1c83c7906e10d7a6e1ce1c 697 Gene3D G3DSA:1.10.730.10 591 684 4.0E-4 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS02065 e6c248585e1c83c7906e10d7a6e1ce1c 697 PANTHER PTHR30075 1 697 1.9E-256 T 22-04-2016 RPIC12D_RS02065 e6c248585e1c83c7906e10d7a6e1ce1c 697 SUPERFAMILY SSF109604 350 498 3.27E-18 T 22-04-2016 RPIC12D_RS02065 e6c248585e1c83c7906e10d7a6e1ce1c 697 Pfam PF05746 DALR anticodon binding domain 590 683 8.5E-7 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RPIC12D_RS07870 8bcb32b8886ad5f54030b2bb7df347bf 394 PANTHER PTHR15535:SF21 226 339 2.0E-14 T 22-04-2016 RPIC12D_RS07870 8bcb32b8886ad5f54030b2bb7df347bf 394 PANTHER PTHR15535 226 339 2.0E-14 T 22-04-2016 RPIC12D_RS07870 8bcb32b8886ad5f54030b2bb7df347bf 394 SUPERFAMILY SSF53649 267 381 5.56E-5 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RPIC12D_RS07870 8bcb32b8886ad5f54030b2bb7df347bf 394 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 23 9.4E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RPIC12D_RS07870 8bcb32b8886ad5f54030b2bb7df347bf 394 Pfam PF07394 Protein of unknown function (DUF1501) 38 370 7.5E-39 T 22-04-2016 IPR010869 Protein of unknown function DUF1501 RPIC12D_RS05045 69bbe29408d4538df3a74eef06796868 777 SUPERFAMILY SSF55785 421 544 1.86E-7 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS05045 69bbe29408d4538df3a74eef06796868 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 732 750 4.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS05045 69bbe29408d4538df3a74eef06796868 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 715 725 4.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS05045 69bbe29408d4538df3a74eef06796868 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 756 769 4.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS05045 69bbe29408d4538df3a74eef06796868 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 697 711 4.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS05045 69bbe29408d4538df3a74eef06796868 777 PIRSF PIRSF037347 6 775 6.2E-190 T 22-04-2016 IPR017181 Signal transduction histidine kinase, CHASE2/PAS sensor domain-containing, predicted RPIC12D_RS05045 69bbe29408d4538df3a74eef06796868 777 SMART SM01080 42 320 8.4E-81 T 22-04-2016 IPR007890 CHASE2 RPIC12D_RS05045 69bbe29408d4538df3a74eef06796868 777 Pfam PF05226 CHASE2 domain 30 315 6.0E-56 T 22-04-2016 IPR007890 CHASE2 RPIC12D_RS05045 69bbe29408d4538df3a74eef06796868 777 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 661 770 1.0E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS05045 69bbe29408d4538df3a74eef06796868 777 SUPERFAMILY SSF47384 542 617 1.51E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS05045 69bbe29408d4538df3a74eef06796868 777 SUPERFAMILY SSF55874 608 771 1.31E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS05045 69bbe29408d4538df3a74eef06796868 777 Pfam PF08448 PAS fold 434 547 6.1E-12 T 22-04-2016 IPR013656 PAS fold-4 RPIC12D_RS05045 69bbe29408d4538df3a74eef06796868 777 Gene3D G3DSA:3.30.450.20 422 544 1.5E-7 T 22-04-2016 RPIC12D_RS05045 69bbe29408d4538df3a74eef06796868 777 Gene3D G3DSA:1.10.287.130 546 613 2.8E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS05045 69bbe29408d4538df3a74eef06796868 777 PANTHER PTHR24423 426 770 1.2E-63 T 22-04-2016 RPIC12D_RS05045 69bbe29408d4538df3a74eef06796868 777 PANTHER PTHR24423 1 19 1.2E-63 T 22-04-2016 RPIC12D_RS05045 69bbe29408d4538df3a74eef06796868 777 SMART SM00387 660 772 1.4E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS05045 69bbe29408d4538df3a74eef06796868 777 Gene3D G3DSA:3.30.565.10 617 771 1.8E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS09875 acefc4d0ea94890dcd8275890d062baf 304 SUPERFAMILY SSF81606 1 243 7.46E-50 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RPIC12D_RS09875 acefc4d0ea94890dcd8275890d062baf 304 PANTHER PTHR13832:SF278 12 263 2.4E-32 T 22-04-2016 RPIC12D_RS09875 acefc4d0ea94890dcd8275890d062baf 304 Pfam PF13672 Protein phosphatase 2C 9 204 8.3E-12 T 22-04-2016 RPIC12D_RS09875 acefc4d0ea94890dcd8275890d062baf 304 Gene3D G3DSA:3.60.40.10 2 241 5.3E-54 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RPIC12D_RS09875 acefc4d0ea94890dcd8275890d062baf 304 SMART SM00331 7 243 2.6E-16 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RPIC12D_RS09875 acefc4d0ea94890dcd8275890d062baf 304 SMART SM00332 1 241 2.1E-10 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RPIC12D_RS09875 acefc4d0ea94890dcd8275890d062baf 304 PANTHER PTHR13832 12 263 2.4E-32 T 22-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 RPIC12D_RS01330 fdd33d2b84ba1d7568d5b42cdaaa7d89 398 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 371 384 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC12D_RS01330 fdd33d2b84ba1d7568d5b42cdaaa7d89 398 Gene3D G3DSA:1.20.120.140 128 209 7.7E-28 T 22-04-2016 RPIC12D_RS01330 fdd33d2b84ba1d7568d5b42cdaaa7d89 398 PANTHER PTHR11564:SF16 98 397 4.9E-121 T 22-04-2016 RPIC12D_RS01330 fdd33d2b84ba1d7568d5b42cdaaa7d89 398 Gene3D G3DSA:3.40.50.300 210 398 5.1E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01330 fdd33d2b84ba1d7568d5b42cdaaa7d89 398 SUPERFAMILY SSF47364 103 178 3.01E-17 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC12D_RS01330 fdd33d2b84ba1d7568d5b42cdaaa7d89 398 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 127 397 1.7E-100 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RPIC12D_RS01330 fdd33d2b84ba1d7568d5b42cdaaa7d89 398 SUPERFAMILY SSF52540 196 397 7.06E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01330 fdd33d2b84ba1d7568d5b42cdaaa7d89 398 SMART SM00963 108 184 2.4E-16 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC12D_RS01330 fdd33d2b84ba1d7568d5b42cdaaa7d89 398 SMART SM00962 198 398 7.5E-109 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC12D_RS01330 fdd33d2b84ba1d7568d5b42cdaaa7d89 398 Pfam PF00448 SRP54-type protein, GTPase domain 198 398 1.0E-70 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC12D_RS01330 fdd33d2b84ba1d7568d5b42cdaaa7d89 398 Pfam PF02881 SRP54-type protein, helical bundle domain 117 178 3.5E-10 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC12D_RS01330 fdd33d2b84ba1d7568d5b42cdaaa7d89 398 SMART SM00382 197 376 2.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS01330 fdd33d2b84ba1d7568d5b42cdaaa7d89 398 PANTHER PTHR11564 98 397 4.9E-121 T 22-04-2016 RPIC12D_RS01330 fdd33d2b84ba1d7568d5b42cdaaa7d89 398 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 127 398 58.493 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RPIC12D_RS02130 1954e5b9a22b28780f699fd5e4fe6a8e 306 SUPERFAMILY SSF56925 233 306 2.88E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC12D_RS02130 1954e5b9a22b28780f699fd5e4fe6a8e 306 SUPERFAMILY SSF56925 162 205 2.88E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC12D_RS02130 1954e5b9a22b28780f699fd5e4fe6a8e 306 SUPERFAMILY SSF56925 92 134 2.88E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC12D_RS02130 1954e5b9a22b28780f699fd5e4fe6a8e 306 Pfam PF03922 OmpW family 94 306 2.9E-21 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 RPIC12D_RS02130 1954e5b9a22b28780f699fd5e4fe6a8e 306 PANTHER PTHR36920:SF1 157 306 2.9E-14 T 22-04-2016 RPIC12D_RS02130 1954e5b9a22b28780f699fd5e4fe6a8e 306 PANTHER PTHR36920:SF1 1 28 2.9E-14 T 22-04-2016 RPIC12D_RS02130 1954e5b9a22b28780f699fd5e4fe6a8e 306 PANTHER PTHR36920:SF1 61 138 2.9E-14 T 22-04-2016 RPIC12D_RS02130 1954e5b9a22b28780f699fd5e4fe6a8e 306 PANTHER PTHR36920 157 306 2.9E-14 T 22-04-2016 RPIC12D_RS02130 1954e5b9a22b28780f699fd5e4fe6a8e 306 PANTHER PTHR36920 1 28 2.9E-14 T 22-04-2016 RPIC12D_RS02130 1954e5b9a22b28780f699fd5e4fe6a8e 306 PANTHER PTHR36920 61 138 2.9E-14 T 22-04-2016 RPIC12D_RS02130 1954e5b9a22b28780f699fd5e4fe6a8e 306 Gene3D G3DSA:2.40.160.20 61 306 1.1E-59 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC12D_RS12765 6d899da71d3cd28ad11fbd19cc619471 629 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 134 598 6.1E-131 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RPIC12D_RS12765 6d899da71d3cd28ad11fbd19cc619471 629 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 358 591 1.3E-67 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RPIC12D_RS12765 6d899da71d3cd28ad11fbd19cc619471 629 PANTHER PTHR30081:SF1 326 629 8.0E-165 T 22-04-2016 RPIC12D_RS12765 6d899da71d3cd28ad11fbd19cc619471 629 PANTHER PTHR30081:SF1 1 184 8.0E-165 T 22-04-2016 RPIC12D_RS12765 6d899da71d3cd28ad11fbd19cc619471 629 PANTHER PTHR30081:SF1 237 295 8.0E-165 T 22-04-2016 RPIC12D_RS12765 6d899da71d3cd28ad11fbd19cc619471 629 SUPERFAMILY SSF82866 408 607 9.94E-37 T 22-04-2016 RPIC12D_RS12765 6d899da71d3cd28ad11fbd19cc619471 629 Pfam PF13721 SecD export protein N-terminal TM region 1 112 1.6E-36 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain RPIC12D_RS12765 6d899da71d3cd28ad11fbd19cc619471 629 Pfam PF02355 Protein export membrane protein 430 602 3.4E-19 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RPIC12D_RS12765 6d899da71d3cd28ad11fbd19cc619471 629 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 614 44.671 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RPIC12D_RS12765 6d899da71d3cd28ad11fbd19cc619471 629 PANTHER PTHR30081 326 629 8.0E-165 T 22-04-2016 RPIC12D_RS12765 6d899da71d3cd28ad11fbd19cc619471 629 PANTHER PTHR30081 1 184 8.0E-165 T 22-04-2016 RPIC12D_RS12765 6d899da71d3cd28ad11fbd19cc619471 629 PANTHER PTHR30081 237 295 8.0E-165 T 22-04-2016 RPIC12D_RS12765 6d899da71d3cd28ad11fbd19cc619471 629 Pfam PF07549 SecD/SecF GG Motif 127 151 3.6E-5 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RPIC12D_RS12765 6d899da71d3cd28ad11fbd19cc619471 629 Gene3D G3DSA:1.20.1640.10 441 609 3.1E-19 T 22-04-2016 RPIC12D_RS01605 515bde640506db7a716e58761045929f 256 PANTHER PTHR10859:SF84 11 253 1.8E-54 T 22-04-2016 RPIC12D_RS01605 515bde640506db7a716e58761045929f 256 Pfam PF00535 Glycosyl transferase family 2 12 127 4.6E-24 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RPIC12D_RS01605 515bde640506db7a716e58761045929f 256 SUPERFAMILY SSF53448 12 237 2.25E-33 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS01605 515bde640506db7a716e58761045929f 256 Gene3D G3DSA:3.90.550.10 12 219 3.8E-17 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS01605 515bde640506db7a716e58761045929f 256 PANTHER PTHR10859 11 253 1.8E-54 T 22-04-2016 RPIC12D_RS26380 975f415c31df3225b8561be728b7567c 125 Pfam PF01810 LysE type translocator 11 124 4.6E-17 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS26380 975f415c31df3225b8561be728b7567c 125 PANTHER PTHR30086:SF14 1 124 1.9E-31 T 22-04-2016 RPIC12D_RS26380 975f415c31df3225b8561be728b7567c 125 PANTHER PTHR30086 1 124 1.9E-31 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS06930 cbb26d4b8c2a5a5036af428908293405 462 PANTHER PTHR11958:SF5 26 459 8.5E-248 T 22-04-2016 RPIC12D_RS06930 cbb26d4b8c2a5a5036af428908293405 462 Gene3D G3DSA:1.10.3860.10 24 447 7.1E-98 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS06930 cbb26d4b8c2a5a5036af428908293405 462 SUPERFAMILY SSF118215 28 441 4.32E-94 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS06930 cbb26d4b8c2a5a5036af428908293405 462 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 5.93E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS06930 cbb26d4b8c2a5a5036af428908293405 462 PRINTS PR00173 Glutamate-aspartate symporter signature 104 129 5.93E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS06930 cbb26d4b8c2a5a5036af428908293405 462 PRINTS PR00173 Glutamate-aspartate symporter signature 74 94 5.93E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS06930 cbb26d4b8c2a5a5036af428908293405 462 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 5.93E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS06930 cbb26d4b8c2a5a5036af428908293405 462 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 5.93E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS06930 cbb26d4b8c2a5a5036af428908293405 462 PRINTS PR00173 Glutamate-aspartate symporter signature 26 46 5.93E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS06930 cbb26d4b8c2a5a5036af428908293405 462 PANTHER PTHR11958 26 459 8.5E-248 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS06930 cbb26d4b8c2a5a5036af428908293405 462 Pfam PF00375 Sodium:dicarboxylate symporter family 29 441 5.3E-101 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS16550 5ca93d06d33594f03fd76badb0567598 221 SUPERFAMILY SSF46894 119 216 1.19E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS16550 5ca93d06d33594f03fd76badb0567598 221 Pfam PF00072 Response regulator receiver domain 3 112 1.9E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS16550 5ca93d06d33594f03fd76badb0567598 221 SMART SM00448 1 112 1.1E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS16550 5ca93d06d33594f03fd76badb0567598 221 Gene3D G3DSA:1.10.10.10 122 216 4.5E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16550 5ca93d06d33594f03fd76badb0567598 221 PANTHER PTHR26402:SF279 1 217 6.0E-86 T 22-04-2016 RPIC12D_RS16550 5ca93d06d33594f03fd76badb0567598 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 2.3E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS16550 5ca93d06d33594f03fd76badb0567598 221 SUPERFAMILY SSF52172 1 130 5.83E-37 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS16550 5ca93d06d33594f03fd76badb0567598 221 SMART SM00862 146 217 1.7E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS16550 5ca93d06d33594f03fd76badb0567598 221 PANTHER PTHR26402 1 217 6.0E-86 T 22-04-2016 RPIC12D_RS16550 5ca93d06d33594f03fd76badb0567598 221 Gene3D G3DSA:3.40.50.2300 1 120 1.3E-37 T 22-04-2016 RPIC12D_RS01430 57558eb9373f3009f20be04551d1e48e 324 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 5 313 37.238 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 RPIC12D_RS01430 57558eb9373f3009f20be04551d1e48e 324 PANTHER PTHR30305 1 317 1.8E-89 T 22-04-2016 RPIC12D_RS01430 57558eb9373f3009f20be04551d1e48e 324 PANTHER PTHR30305:SF1 1 317 1.8E-89 T 22-04-2016 RPIC12D_RS01430 57558eb9373f3009f20be04551d1e48e 324 Pfam PF02603 HPr Serine kinase N terminus 9 135 1.6E-23 T 22-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 RPIC12D_RS01430 57558eb9373f3009f20be04551d1e48e 324 Gene3D G3DSA:3.40.1390.20 12 137 3.7E-34 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RPIC12D_RS01430 57558eb9373f3009f20be04551d1e48e 324 SUPERFAMILY SSF75138 11 137 7.19E-30 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RPIC12D_RS01430 57558eb9373f3009f20be04551d1e48e 324 Pfam PF07475 HPr Serine kinase C-terminal domain 140 305 8.8E-61 T 22-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 RPIC12D_RS01430 57558eb9373f3009f20be04551d1e48e 324 Gene3D G3DSA:3.40.50.300 141 313 1.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01430 57558eb9373f3009f20be04551d1e48e 324 SUPERFAMILY SSF53795 140 306 1.77E-34 T 22-04-2016 RPIC12D_RS01430 57558eb9373f3009f20be04551d1e48e 324 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 13 309 2.1E-95 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 RPIC12D_RS25295 1626f4ba49b77f27580771ff09c2b2eb 66 SUPERFAMILY SSF47203 2 61 7.57E-10 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS25295 1626f4ba49b77f27580771ff09c2b2eb 66 PANTHER PTHR10909:SF296 1 55 1.6E-15 T 22-04-2016 RPIC12D_RS25295 1626f4ba49b77f27580771ff09c2b2eb 66 PANTHER PTHR10909 1 55 1.6E-15 T 22-04-2016 RPIC12D_RS25295 1626f4ba49b77f27580771ff09c2b2eb 66 Gene3D G3DSA:1.20.140.10 19 65 8.9E-7 T 22-04-2016 RPIC12D_RS02720 f57cec73345bbcd6395c61fa8b46b1bf 397 SUPERFAMILY SSF52172 1 122 7.47E-10 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS02720 f57cec73345bbcd6395c61fa8b46b1bf 397 PANTHER PTHR13696 70 381 1.6E-34 T 22-04-2016 RPIC12D_RS02720 f57cec73345bbcd6395c61fa8b46b1bf 397 Gene3D G3DSA:3.40.50.2300 2 120 1.2E-5 T 22-04-2016 RPIC12D_RS02720 f57cec73345bbcd6395c61fa8b46b1bf 397 Gene3D G3DSA:3.40.50.300 130 370 4.0E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS02720 f57cec73345bbcd6395c61fa8b46b1bf 397 SUPERFAMILY SSF52540 132 370 6.83E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS02720 f57cec73345bbcd6395c61fa8b46b1bf 397 Pfam PF13614 AAA domain 132 269 3.3E-8 T 22-04-2016 IPR025669 AAA domain RPIC12D_RS08680 10148736ab95b28064dd30d37ee41b3d 166 SMART SM01103 6 89 7.3E-40 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RPIC12D_RS08680 10148736ab95b28064dd30d37ee41b3d 166 Gene3D G3DSA:3.30.110.60 6 92 9.1E-27 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RPIC12D_RS08680 10148736ab95b28064dd30d37ee41b3d 166 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 14 89 3.0E-37 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RPIC12D_RS08680 10148736ab95b28064dd30d37ee41b3d 166 SUPERFAMILY SSF75471 5 92 1.7E-24 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RPIC12D_RS08680 10148736ab95b28064dd30d37ee41b3d 166 PANTHER PTHR40065 4 127 1.2E-12 T 22-04-2016 RPIC12D_RS08680 10148736ab95b28064dd30d37ee41b3d 166 PANTHER PTHR40065:SF1 4 127 1.2E-12 T 22-04-2016 RPIC12D_RS08680 10148736ab95b28064dd30d37ee41b3d 166 Pfam PF01985 CRS1 / YhbY (CRM) domain 6 89 2.8E-15 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RPIC12D_RS04815 ee36028094829ba0be17543042159ce1 469 Pfam PF16980 Putative citrate transport 24 468 3.6E-196 T 22-04-2016 IPR031566 Putative citrate transporter RPIC12D_RS02080 6134da917366241b98dba32f08ad3d57 503 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 6 486 22.694 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 RPIC12D_RS02080 6134da917366241b98dba32f08ad3d57 503 Pfam PF00795 Carbon-nitrogen hydrolase 238 466 9.4E-28 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RPIC12D_RS02080 6134da917366241b98dba32f08ad3d57 503 PANTHER PTHR38686 1 503 2.2E-81 T 22-04-2016 RPIC12D_RS02080 6134da917366241b98dba32f08ad3d57 503 SUPERFAMILY SSF56317 216 477 1.06E-34 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RPIC12D_RS02080 6134da917366241b98dba32f08ad3d57 503 Gene3D G3DSA:3.60.110.10 216 466 1.2E-23 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RPIC12D_RS02080 6134da917366241b98dba32f08ad3d57 503 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 60 448 2.1E-114 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 RPIC12D_RS14005 6e240c7e8eb7c68ce74916bdf5091480 435 SUPERFAMILY SSF69742 1 165 2.09E-44 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC12D_RS14005 6e240c7e8eb7c68ce74916bdf5091480 435 Gene3D G3DSA:3.40.50.720 190 369 1.9E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS14005 6e240c7e8eb7c68ce74916bdf5091480 435 PIRSF PIRSF000445 1 435 7.9E-148 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC12D_RS14005 6e240c7e8eb7c68ce74916bdf5091480 435 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 427 2.5E-124 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC12D_RS14005 6e240c7e8eb7c68ce74916bdf5091480 435 SUPERFAMILY SSF69075 329 428 3.14E-29 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC12D_RS14005 6e240c7e8eb7c68ce74916bdf5091480 435 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 332 427 5.5E-27 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC12D_RS14005 6e240c7e8eb7c68ce74916bdf5091480 435 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 163 9.0E-47 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC12D_RS14005 6e240c7e8eb7c68ce74916bdf5091480 435 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 179 317 4.1E-45 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RPIC12D_RS14005 6e240c7e8eb7c68ce74916bdf5091480 435 PANTHER PTHR21089:SF3 284 371 2.3E-109 T 22-04-2016 RPIC12D_RS14005 6e240c7e8eb7c68ce74916bdf5091480 435 PANTHER PTHR21089:SF3 77 268 2.3E-109 T 22-04-2016 RPIC12D_RS14005 6e240c7e8eb7c68ce74916bdf5091480 435 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 106 129 - T 22-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC12D_RS14005 6e240c7e8eb7c68ce74916bdf5091480 435 SUPERFAMILY SSF51735 170 324 1.79E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS14005 6e240c7e8eb7c68ce74916bdf5091480 435 PANTHER PTHR21089 284 371 2.3E-109 T 22-04-2016 RPIC12D_RS14005 6e240c7e8eb7c68ce74916bdf5091480 435 PANTHER PTHR21089 77 268 2.3E-109 T 22-04-2016 RPIC12D_RS14005 6e240c7e8eb7c68ce74916bdf5091480 435 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 430 29.292 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC12D_RS08455 c13671ef08f5e0e19b17c9ace1aba278 861 Pfam PF05954 Phage late control gene D protein (GPD) 41 360 2.4E-91 T 22-04-2016 RPIC12D_RS08455 c13671ef08f5e0e19b17c9ace1aba278 861 Gene3D G3DSA:3.55.50.10 127 217 1.6E-23 T 22-04-2016 RPIC12D_RS08455 c13671ef08f5e0e19b17c9ace1aba278 861 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 36 532 5.5E-108 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RPIC12D_RS08455 c13671ef08f5e0e19b17c9ace1aba278 861 SUPERFAMILY SSF69279 29 212 8.08E-42 T 22-04-2016 RPIC12D_RS08455 c13671ef08f5e0e19b17c9ace1aba278 861 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 29 530 2.9E-124 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RPIC12D_RS08455 c13671ef08f5e0e19b17c9ace1aba278 861 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 505 611 3.5E-34 T 22-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain RPIC12D_RS08455 c13671ef08f5e0e19b17c9ace1aba278 861 PANTHER PTHR32305:SF9 21 509 5.8E-121 T 22-04-2016 RPIC12D_RS08455 c13671ef08f5e0e19b17c9ace1aba278 861 SUPERFAMILY SSF69255 394 482 1.02E-28 T 22-04-2016 RPIC12D_RS08455 c13671ef08f5e0e19b17c9ace1aba278 861 SUPERFAMILY SSF69279 220 394 5.1E-37 T 22-04-2016 RPIC12D_RS08455 c13671ef08f5e0e19b17c9ace1aba278 861 SUPERFAMILY SSF69349 472 585 7.14E-6 T 22-04-2016 RPIC12D_RS08455 c13671ef08f5e0e19b17c9ace1aba278 861 Gene3D G3DSA:2.40.50.230 401 482 1.1E-32 T 22-04-2016 IPR006531 Gp5 N-terminal RPIC12D_RS08455 c13671ef08f5e0e19b17c9ace1aba278 861 PANTHER PTHR32305 21 509 5.8E-121 T 22-04-2016 RPIC12D_RS08455 c13671ef08f5e0e19b17c9ace1aba278 861 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 645 792 6.6E-39 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal RPIC12D_RS07330 e951d21db3c052f43e9b67d91ed449db 434 PANTHER PTHR23150:SF24 24 434 5.2E-112 T 22-04-2016 RPIC12D_RS07330 e951d21db3c052f43e9b67d91ed449db 434 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 17 431 8.3E-174 T 22-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 RPIC12D_RS07330 e951d21db3c052f43e9b67d91ed449db 434 Gene3D G3DSA:3.90.1580.10 178 433 4.4E-65 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme RPIC12D_RS07330 e951d21db3c052f43e9b67d91ed449db 434 SUPERFAMILY SSF109854 11 149 1.83E-5 T 22-04-2016 RPIC12D_RS07330 e951d21db3c052f43e9b67d91ed449db 434 Pfam PF12867 DinB superfamily 24 149 1.2E-12 T 22-04-2016 IPR024775 DinB-like domain RPIC12D_RS07330 e951d21db3c052f43e9b67d91ed449db 434 PANTHER PTHR23150 24 434 5.2E-112 T 22-04-2016 RPIC12D_RS07330 e951d21db3c052f43e9b67d91ed449db 434 Pfam PF03781 Sulfatase-modifying factor enzyme 1 185 335 1.7E-27 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme RPIC12D_RS07330 e951d21db3c052f43e9b67d91ed449db 434 Pfam PF03781 Sulfatase-modifying factor enzyme 1 352 432 1.3E-9 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme RPIC12D_RS07330 e951d21db3c052f43e9b67d91ed449db 434 SUPERFAMILY SSF56436 184 432 3.01E-72 T 22-04-2016 IPR016187 C-type lectin fold RPIC12D_RS04870 9f405932ab916194a60e3df749a96d7c 364 SUPERFAMILY SSF52096 249 309 1.47E-43 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS04870 9f405932ab916194a60e3df749a96d7c 364 SUPERFAMILY SSF52096 89 220 1.47E-43 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS04870 9f405932ab916194a60e3df749a96d7c 364 Gene3D G3DSA:3.90.226.10 250 334 1.1E-46 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS04870 9f405932ab916194a60e3df749a96d7c 364 Gene3D G3DSA:3.90.226.10 87 212 1.1E-46 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS04870 9f405932ab916194a60e3df749a96d7c 364 Pfam PF01343 Peptidase family S49 172 317 3.5E-39 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 RPIC12D_RS04870 9f405932ab916194a60e3df749a96d7c 364 PANTHER PTHR30341 59 345 1.8E-89 T 22-04-2016 RPIC12D_RS04870 9f405932ab916194a60e3df749a96d7c 364 PANTHER PTHR30341:SF1 59 345 1.8E-89 T 22-04-2016 RPIC12D_RS13195 ad37b6591bd745e99ba133f8f7d003a7 360 Pfam PF10994 Protein of unknown function (DUF2817) 7 346 7.7E-134 T 22-04-2016 IPR021259 Protein of unknown function DUF2817 RPIC12D_RS13195 ad37b6591bd745e99ba133f8f7d003a7 360 Gene3D G3DSA:3.40.630.10 6 131 8.3E-23 T 22-04-2016 RPIC12D_RS13195 ad37b6591bd745e99ba133f8f7d003a7 360 Gene3D G3DSA:3.40.630.10 186 297 8.3E-23 T 22-04-2016 RPIC12D_RS13195 ad37b6591bd745e99ba133f8f7d003a7 360 SUPERFAMILY SSF53187 59 127 6.28E-21 T 22-04-2016 RPIC12D_RS13195 ad37b6591bd745e99ba133f8f7d003a7 360 SUPERFAMILY SSF53187 186 311 6.28E-21 T 22-04-2016 RPIC12D_RS09500 919c923230479d2093a8ac1233a93da0 167 PANTHER PTHR10371 2 157 4.1E-59 T 22-04-2016 RPIC12D_RS09500 919c923230479d2093a8ac1233a93da0 167 PIRSF PIRSF000216 1 167 1.4E-59 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RPIC12D_RS09500 919c923230479d2093a8ac1233a93da0 167 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 9 157 1.3E-65 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RPIC12D_RS09500 919c923230479d2093a8ac1233a93da0 167 Gene3D G3DSA:3.40.30.10 77 146 1.8E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS09500 919c923230479d2093a8ac1233a93da0 167 SUPERFAMILY SSF52833 3 161 2.01E-52 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS09500 919c923230479d2093a8ac1233a93da0 167 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 11 156 5.9E-51 T 22-04-2016 RPIC12D_RS09500 919c923230479d2093a8ac1233a93da0 167 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 113 131 - T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RPIC12D_RS16640 687417d7127a0a972bf731aef10b51ae 71 Pfam PF02597 ThiS family 13 71 9.3E-11 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RPIC12D_RS16640 687417d7127a0a972bf731aef10b51ae 71 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 5 71 1.9E-10 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis RPIC12D_RS16640 687417d7127a0a972bf731aef10b51ae 71 Gene3D G3DSA:3.10.20.30 4 71 3.0E-15 T 22-04-2016 IPR012675 Beta-grasp domain RPIC12D_RS16640 687417d7127a0a972bf731aef10b51ae 71 SUPERFAMILY SSF54285 3 71 5.37E-10 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RPIC12D_RS11100 96efdfc3e4af9a045f6d319c49b45b95 339 Gene3D G3DSA:1.10.3470.10 11 337 1.7E-91 T 22-04-2016 IPR029022 ABC transporter, BtuC-like RPIC12D_RS11100 96efdfc3e4af9a045f6d319c49b45b95 339 Pfam PF01032 FecCD transport family 23 336 3.7E-84 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RPIC12D_RS11100 96efdfc3e4af9a045f6d319c49b45b95 339 SUPERFAMILY SSF81345 9 336 4.32E-70 T 22-04-2016 IPR029022 ABC transporter, BtuC-like RPIC12D_RS11100 96efdfc3e4af9a045f6d319c49b45b95 339 PANTHER PTHR30472 12 339 4.0E-82 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RPIC12D_RS12480 46e11c575814d8f54980730b4cf86505 300 PANTHER PTHR30221:SF3 1 280 1.7E-178 T 22-04-2016 RPIC12D_RS12480 46e11c575814d8f54980730b4cf86505 300 SUPERFAMILY SSF50182 114 179 1.18E-16 T 22-04-2016 IPR010920 LSM domain RPIC12D_RS12480 46e11c575814d8f54980730b4cf86505 300 Gene3D G3DSA:3.30.70.100 181 265 4.7E-13 T 22-04-2016 RPIC12D_RS12480 46e11c575814d8f54980730b4cf86505 300 Gene3D G3DSA:2.30.30.60 129 178 1.7E-17 T 22-04-2016 RPIC12D_RS12480 46e11c575814d8f54980730b4cf86505 300 Pfam PF00924 Mechanosensitive ion channel 71 265 3.2E-40 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RPIC12D_RS12480 46e11c575814d8f54980730b4cf86505 300 SUPERFAMILY SSF82689 180 277 1.57E-20 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RPIC12D_RS12480 46e11c575814d8f54980730b4cf86505 300 PANTHER PTHR30221 1 280 1.7E-178 T 22-04-2016 RPIC12D_RS12480 46e11c575814d8f54980730b4cf86505 300 SUPERFAMILY SSF82861 28 111 1.03E-15 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RPIC12D_RS04460 abe8b9b32646656286f5ce348f0d315d 627 PANTHER PTHR24031 124 519 6.1E-179 T 22-04-2016 RPIC12D_RS04460 abe8b9b32646656286f5ce348f0d315d 627 PANTHER PTHR24031 29 100 6.1E-179 T 22-04-2016 RPIC12D_RS04460 abe8b9b32646656286f5ce348f0d315d 627 SMART SM00487 52 273 7.7E-58 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC12D_RS04460 abe8b9b32646656286f5ce348f0d315d 627 SUPERFAMILY SSF52540 125 412 5.93E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04460 abe8b9b32646656286f5ce348f0d315d 627 Gene3D G3DSA:3.40.50.300 257 420 4.4E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04460 abe8b9b32646656286f5ce348f0d315d 627 Gene3D G3DSA:3.40.50.300 26 256 1.7E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04460 abe8b9b32646656286f5ce348f0d315d 627 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 204 212 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RPIC12D_RS04460 abe8b9b32646656286f5ce348f0d315d 627 SMART SM00490 310 391 7.2E-35 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS04460 abe8b9b32646656286f5ce348f0d315d 627 Pfam PF00271 Helicase conserved C-terminal domain 286 391 3.4E-28 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS04460 abe8b9b32646656286f5ce348f0d315d 627 PANTHER PTHR24031:SF261 124 519 6.1E-179 T 22-04-2016 RPIC12D_RS04460 abe8b9b32646656286f5ce348f0d315d 627 PANTHER PTHR24031:SF261 29 100 6.1E-179 T 22-04-2016 RPIC12D_RS04460 abe8b9b32646656286f5ce348f0d315d 627 Pfam PF00270 DEAD/DEAH box helicase 57 246 5.0E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIC12D_RS16030 bbfc0533a1bb0ba424998e6c6e95b6eb 649 Gene3D G3DSA:3.50.50.60 6 235 2.1E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS16030 bbfc0533a1bb0ba424998e6c6e95b6eb 649 SUPERFAMILY SSF51905 97 262 2.87E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS16030 bbfc0533a1bb0ba424998e6c6e95b6eb 649 SUPERFAMILY SSF51905 7 66 2.87E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS16030 bbfc0533a1bb0ba424998e6c6e95b6eb 649 PANTHER PTHR11806:SF0 1 631 0.0 T 22-04-2016 RPIC12D_RS16030 bbfc0533a1bb0ba424998e6c6e95b6eb 649 PANTHER PTHR11806 1 631 0.0 T 22-04-2016 RPIC12D_RS16030 bbfc0533a1bb0ba424998e6c6e95b6eb 649 Pfam PF13932 GidA associated domain 403 625 2.6E-73 T 22-04-2016 IPR026904 GidA associated domain 3 RPIC12D_RS16030 bbfc0533a1bb0ba424998e6c6e95b6eb 649 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 631 2.0E-273 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 RPIC12D_RS16030 bbfc0533a1bb0ba424998e6c6e95b6eb 649 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 22-04-2016 IPR020595 MnmG-related, conserved site RPIC12D_RS16030 bbfc0533a1bb0ba424998e6c6e95b6eb 649 SMART SM01228 556 627 3.7E-45 T 22-04-2016 RPIC12D_RS16030 bbfc0533a1bb0ba424998e6c6e95b6eb 649 Pfam PF01134 Glucose inhibited division protein A 8 400 2.2E-165 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 RPIC12D_RS16030 bbfc0533a1bb0ba424998e6c6e95b6eb 649 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 22-04-2016 IPR020595 MnmG-related, conserved site RPIC12D_RS16030 bbfc0533a1bb0ba424998e6c6e95b6eb 649 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 634 42.578 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 PANTHER PTHR23151:SF68 317 559 2.0E-249 T 22-04-2016 RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 PANTHER PTHR23151:SF68 24 297 2.0E-249 T 22-04-2016 RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 Pfam PF02817 e3 binding domain 257 291 1.3E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 SUPERFAMILY SSF51230 3 97 5.63E-25 T 22-04-2016 IPR011053 Single hybrid motif RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 147 176 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 SUPERFAMILY SSF52777 323 558 3.83E-84 T 22-04-2016 RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 Gene3D G3DSA:4.10.320.10 254 302 1.9E-18 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 338 559 1.3E-79 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 Gene3D G3DSA:2.40.50.100 124 200 2.6E-23 T 22-04-2016 RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 PANTHER PTHR23151 317 559 2.0E-249 T 22-04-2016 RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 PANTHER PTHR23151 24 297 2.0E-249 T 22-04-2016 RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 Gene3D G3DSA:3.30.559.10 325 559 4.9E-84 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 Gene3D G3DSA:2.40.50.100 2 96 1.3E-23 T 22-04-2016 RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 101 561 1.1E-194 T 22-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 SUPERFAMILY SSF47005 254 295 1.83E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 Pfam PF00364 Biotin-requiring enzyme 125 196 1.2E-22 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 Pfam PF00364 Biotin-requiring enzyme 6 75 2.3E-22 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RPIC12D_RS08135 916133ad01bd6dd18a291dc7f2f66e6f 561 SUPERFAMILY SSF51230 123 212 2.66E-24 T 22-04-2016 IPR011053 Single hybrid motif RPIC12D_RS13570 35e25a084c2ff8057e28b5108f6f3516 409 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 24 407 0.0 T 22-04-2016 RPIC12D_RS13570 35e25a084c2ff8057e28b5108f6f3516 409 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 409 164.706 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RPIC12D_RS13570 35e25a084c2ff8057e28b5108f6f3516 409 SUPERFAMILY SSF56266 16 406 2.35E-143 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RPIC12D_RS13570 35e25a084c2ff8057e28b5108f6f3516 409 Pfam PF01960 ArgJ family 24 409 4.5E-149 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RPIC12D_RS13570 35e25a084c2ff8057e28b5108f6f3516 409 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 16 409 2.3E-129 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RPIC12D_RS13570 35e25a084c2ff8057e28b5108f6f3516 409 Gene3D G3DSA:3.60.70.12 12 280 3.0E-102 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RPIC12D_RS13570 35e25a084c2ff8057e28b5108f6f3516 409 PANTHER PTHR23100 18 409 4.0E-180 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RPIC12D_RS13570 35e25a084c2ff8057e28b5108f6f3516 409 PANTHER PTHR23100:SF0 18 409 4.0E-180 T 22-04-2016 RPIC12D_RS12025 e21525007ab2b71c9c16ef7f58036b28 349 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 11 336 38.593 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 RPIC12D_RS12025 e21525007ab2b71c9c16ef7f58036b28 349 PANTHER PTHR30160 24 349 8.0E-66 T 22-04-2016 RPIC12D_RS12025 e21525007ab2b71c9c16ef7f58036b28 349 Gene3D G3DSA:3.40.50.300 55 153 6.5E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12025 e21525007ab2b71c9c16ef7f58036b28 349 SUPERFAMILY SSF52540 56 169 5.63E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12025 e21525007ab2b71c9c16ef7f58036b28 349 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 23 335 1.4E-102 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 RPIC12D_RS12025 e21525007ab2b71c9c16ef7f58036b28 349 PANTHER PTHR30160:SF13 24 349 8.0E-66 T 22-04-2016 RPIC12D_RS12025 e21525007ab2b71c9c16ef7f58036b28 349 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 29 324 6.5E-67 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 Gene3D G3DSA:3.30.565.10 6 242 4.3E-83 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 SMART SM00387 28 185 1.8E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 PRINTS PR00775 90kDa heat shock protein signature 94 111 1.6E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 PRINTS PR00775 90kDa heat shock protein signature 173 190 1.6E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 PRINTS PR00775 90kDa heat shock protein signature 121 143 1.6E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 PRINTS PR00775 90kDa heat shock protein signature 27 49 1.6E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 PRINTS PR00775 90kDa heat shock protein signature 6 26 1.6E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 PRINTS PR00775 90kDa heat shock protein signature 76 93 1.6E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 PRINTS PR00775 90kDa heat shock protein signature 191 209 1.6E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 PIRSF PIRSF002583 1 640 1.1E-209 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 PANTHER PTHR11528:SF44 1 639 0.0 T 22-04-2016 RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 26 35 - T 22-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 Hamap MF_00505 Chaperone protein HtpG [htpG]. 3 640 32.725 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 SUPERFAMILY SSF55874 5 217 7.53E-67 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 SUPERFAMILY SSF110942 520 639 1.11E-34 T 22-04-2016 RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 183 2.1E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 Pfam PF00183 Hsp90 protein 217 639 4.4E-126 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 PANTHER PTHR11528 1 639 0.0 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RPIC12D_RS04595 fea87df13980d8f17f4205ed989e3797 640 SUPERFAMILY SSF54211 236 494 1.29E-93 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS07265 95467209488fa8a9191faab9f0cad9c3 320 Gene3D G3DSA:1.10.10.60 267 314 2.9E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS07265 95467209488fa8a9191faab9f0cad9c3 320 SMART SM00342 229 312 1.8E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS07265 95467209488fa8a9191faab9f0cad9c3 320 SUPERFAMILY SSF46689 265 314 3.67E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS07265 95467209488fa8a9191faab9f0cad9c3 320 SUPERFAMILY SSF51182 139 183 8.62E-8 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS07265 95467209488fa8a9191faab9f0cad9c3 320 SUPERFAMILY SSF51182 47 96 8.62E-8 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS07265 95467209488fa8a9191faab9f0cad9c3 320 Pfam PF12852 Cupin 10 197 3.8E-33 T 22-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain RPIC12D_RS07265 95467209488fa8a9191faab9f0cad9c3 320 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 266 308 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS07265 95467209488fa8a9191faab9f0cad9c3 320 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 214 258 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS07265 95467209488fa8a9191faab9f0cad9c3 320 Gene3D G3DSA:1.10.10.60 210 266 4.0E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS07265 95467209488fa8a9191faab9f0cad9c3 320 Pfam PF12833 Helix-turn-helix domain 235 313 4.3E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS07265 95467209488fa8a9191faab9f0cad9c3 320 PANTHER PTHR11019:SF77 42 114 4.1E-49 T 22-04-2016 RPIC12D_RS07265 95467209488fa8a9191faab9f0cad9c3 320 PANTHER PTHR11019:SF77 131 320 4.1E-49 T 22-04-2016 RPIC12D_RS07265 95467209488fa8a9191faab9f0cad9c3 320 PANTHER PTHR11019 42 114 4.1E-49 T 22-04-2016 RPIC12D_RS07265 95467209488fa8a9191faab9f0cad9c3 320 PANTHER PTHR11019 131 320 4.1E-49 T 22-04-2016 RPIC12D_RS07265 95467209488fa8a9191faab9f0cad9c3 320 SUPERFAMILY SSF46689 214 263 1.55E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS07265 95467209488fa8a9191faab9f0cad9c3 320 Gene3D G3DSA:2.60.120.10 8 96 1.2E-5 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.8E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 Pfam PF01926 50S ribosome-binding GTPase 182 300 9.2E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 3.4E-8 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.4E-8 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 Hamap MF_00195 GTPase Der [der]. 2 439 37.529 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 156 1.4E-17 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 181 346 5.8E-25 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 PANTHER PTHR11649:SF5 1 439 3.0E-138 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 436 7.4E-168 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 Gene3D G3DSA:3.30.300.20 362 438 1.1E-24 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 SUPERFAMILY SSF52540 4 164 1.07E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 PIRSF PIRSF006485 1 444 8.9E-167 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 SUPERFAMILY SSF52540 138 442 7.45E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 PANTHER PTHR11649 1 439 3.0E-138 T 22-04-2016 RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 Gene3D G3DSA:3.40.50.300 180 361 2.8E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 Gene3D G3DSA:3.40.50.300 3 170 3.2E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 SMART SM00382 179 322 0.0013 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 SMART SM00382 1 140 2.6 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS05810 a0d97933dadf168b29292e354052b27f 447 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 356 436 7.3E-25 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like RPIC12D_RS12105 59cdeeaaa3489b23a8413accc368784e 207 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 9 201 20.085 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RPIC12D_RS12105 59cdeeaaa3489b23a8413accc368784e 207 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 7 202 3.0E-57 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RPIC12D_RS12105 59cdeeaaa3489b23a8413accc368784e 207 SMART SM01207 12 193 5.0E-82 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RPIC12D_RS12105 59cdeeaaa3489b23a8413accc368784e 207 PANTHER PTHR30309:SF0 2 205 2.6E-70 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RPIC12D_RS12105 59cdeeaaa3489b23a8413accc368784e 207 Pfam PF02660 Glycerol-3-phosphate acyltransferase 14 192 3.2E-50 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RPIC12D_RS12105 59cdeeaaa3489b23a8413accc368784e 207 PANTHER PTHR30309 2 205 2.6E-70 T 22-04-2016 RPIC12D_RS06955 0b3c6fab9326766445b869bc1e542bad 231 Pfam PF01323 DSBA-like thioredoxin domain 8 183 4.8E-8 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RPIC12D_RS06955 0b3c6fab9326766445b869bc1e542bad 231 Gene3D G3DSA:3.40.30.10 159 185 7.5E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS06955 0b3c6fab9326766445b869bc1e542bad 231 Gene3D G3DSA:3.40.30.10 3 42 7.5E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS06955 0b3c6fab9326766445b869bc1e542bad 231 Gene3D G3DSA:1.10.472.60 45 158 3.2E-41 T 22-04-2016 IPR023169 UPF0413, central domain RPIC12D_RS06955 0b3c6fab9326766445b869bc1e542bad 231 SUPERFAMILY SSF52833 3 210 4.35E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS13560 891190b3044859fe3f543fc23f753b8e 153 PANTHER PTHR22769:SF35 22 128 5.0E-24 T 22-04-2016 RPIC12D_RS13560 891190b3044859fe3f543fc23f753b8e 153 Gene3D G3DSA:3.90.79.10 25 148 5.2E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS13560 891190b3044859fe3f543fc23f753b8e 153 PRINTS PR00502 NUDIX hydrolase family signature 68 83 3.2E-7 T 22-04-2016 IPR020476 NUDIX hydrolase RPIC12D_RS13560 891190b3044859fe3f543fc23f753b8e 153 PRINTS PR00502 NUDIX hydrolase family signature 54 68 3.2E-7 T 22-04-2016 IPR020476 NUDIX hydrolase RPIC12D_RS13560 891190b3044859fe3f543fc23f753b8e 153 PANTHER PTHR22769 22 128 5.0E-24 T 22-04-2016 RPIC12D_RS13560 891190b3044859fe3f543fc23f753b8e 153 ProSitePatterns PS00893 Nudix box signature. 59 80 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RPIC12D_RS13560 891190b3044859fe3f543fc23f753b8e 153 SUPERFAMILY SSF55811 15 129 2.03E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS13560 891190b3044859fe3f543fc23f753b8e 153 Pfam PF00293 NUDIX domain 27 121 1.8E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC12D_RS08190 b04686297c34e7a375c5a7567bb43c87 289 SUPERFAMILY SSF53213 12 279 1.03E-50 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RPIC12D_RS08190 b04686297c34e7a375c5a7567bb43c87 289 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 279 1.7E-74 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RPIC12D_RS08190 b04686297c34e7a375c5a7567bb43c87 289 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 281 3.0E-147 T 22-04-2016 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD-Fe KEGG: 00350+1.13.11.15|UniPathway: UPA00208 RPIC12D_RS08190 b04686297c34e7a375c5a7567bb43c87 289 Gene3D G3DSA:3.40.830.10 5 270 8.9E-23 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RPIC12D_RS12450 9442b1882005c02706800d4bbccacf5f 204 Gene3D G3DSA:1.20.1540.10 12 191 1.1E-12 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RPIC12D_RS12450 9442b1882005c02706800d4bbccacf5f 204 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 33 192 1.2E-43 T 22-04-2016 IPR023826 Rhomboid-like serine protease, proteobacteria RPIC12D_RS12450 9442b1882005c02706800d4bbccacf5f 204 Pfam PF01694 Rhomboid family 42 191 1.9E-7 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RPIC12D_RS12450 9442b1882005c02706800d4bbccacf5f 204 SUPERFAMILY SSF144091 4 192 3.92E-20 T 22-04-2016 RPIC12D_RS12060 53a9eeaab03d36065f5b4a90a6323807 181 Gene3D G3DSA:3.40.630.30 3 156 3.8E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS12060 53a9eeaab03d36065f5b4a90a6323807 181 SUPERFAMILY SSF55729 5 156 8.41E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS12060 53a9eeaab03d36065f5b4a90a6323807 181 Pfam PF00583 Acetyltransferase (GNAT) family 69 145 4.8E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC12D_RS12060 53a9eeaab03d36065f5b4a90a6323807 181 PANTHER PTHR23091 1 145 2.1E-17 T 22-04-2016 RPIC12D_RS06610 dd1e0626625beee6840f09efcdebc948 329 Pfam PF01418 Helix-turn-helix domain, rpiR family 22 90 9.2E-12 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RPIC12D_RS06610 dd1e0626625beee6840f09efcdebc948 329 Gene3D G3DSA:3.40.50.10490 121 280 2.8E-23 T 22-04-2016 RPIC12D_RS06610 dd1e0626625beee6840f09efcdebc948 329 PANTHER PTHR30514:SF3 21 317 1.1E-34 T 22-04-2016 RPIC12D_RS06610 dd1e0626625beee6840f09efcdebc948 329 SUPERFAMILY SSF53697 115 279 5.06E-26 T 22-04-2016 RPIC12D_RS06610 dd1e0626625beee6840f09efcdebc948 329 Pfam PF01380 SIS domain 149 272 7.3E-17 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RPIC12D_RS06610 dd1e0626625beee6840f09efcdebc948 329 Gene3D G3DSA:1.10.10.10 21 93 1.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06610 dd1e0626625beee6840f09efcdebc948 329 PANTHER PTHR30514 21 317 1.1E-34 T 22-04-2016 RPIC12D_RS06610 dd1e0626625beee6840f09efcdebc948 329 SUPERFAMILY SSF46689 22 93 1.4E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS13565 abcf2d5d2a6b9cc84c7399d22e540edb 294 Gene3D G3DSA:3.40.50.300 57 196 1.4E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13565 abcf2d5d2a6b9cc84c7399d22e540edb 294 PANTHER PTHR13779 218 289 3.5E-74 T 22-04-2016 RPIC12D_RS13565 abcf2d5d2a6b9cc84c7399d22e540edb 294 PANTHER PTHR13779 26 190 3.5E-74 T 22-04-2016 RPIC12D_RS13565 abcf2d5d2a6b9cc84c7399d22e540edb 294 SMART SM00382 86 214 0.0016 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS13565 abcf2d5d2a6b9cc84c7399d22e540edb 294 PANTHER PTHR13779:SF28 218 289 3.5E-74 T 22-04-2016 RPIC12D_RS13565 abcf2d5d2a6b9cc84c7399d22e540edb 294 PANTHER PTHR13779:SF28 26 190 3.5E-74 T 22-04-2016 RPIC12D_RS13565 abcf2d5d2a6b9cc84c7399d22e540edb 294 Pfam PF05673 Protein of unknown function (DUF815) 31 287 2.5E-104 T 22-04-2016 IPR008533 Domain of unknown function DUF815 RPIC12D_RS13565 abcf2d5d2a6b9cc84c7399d22e540edb 294 SUPERFAMILY SSF52540 31 195 1.1E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS00480 1499e2a6d240b9ebb2a1bb94dd67e561 285 PANTHER PTHR13774:SF15 1 285 1.2E-59 T 22-04-2016 RPIC12D_RS00480 1499e2a6d240b9ebb2a1bb94dd67e561 285 Gene3D G3DSA:3.10.310.10 5 117 9.1E-33 T 22-04-2016 RPIC12D_RS00480 1499e2a6d240b9ebb2a1bb94dd67e561 285 Gene3D G3DSA:3.10.310.10 126 274 9.2E-34 T 22-04-2016 RPIC12D_RS00480 1499e2a6d240b9ebb2a1bb94dd67e561 285 PANTHER PTHR13774 1 285 1.2E-59 T 22-04-2016 RPIC12D_RS00480 1499e2a6d240b9ebb2a1bb94dd67e561 285 Pfam PF02567 Phenazine biosynthesis-like protein 10 269 3.9E-44 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- RPIC12D_RS00480 1499e2a6d240b9ebb2a1bb94dd67e561 285 SUPERFAMILY SSF54506 4 285 1.12E-63 T 22-04-2016 RPIC12D_RS00480 1499e2a6d240b9ebb2a1bb94dd67e561 285 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 271 1.8E-45 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- RPIC12D_RS00480 1499e2a6d240b9ebb2a1bb94dd67e561 285 PIRSF PIRSF016184 1 285 2.2E-64 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- RPIC12D_RS06210 f926420cc2a5d63b4cca8b4bcf155bfa 131 Gene3D G3DSA:3.10.450.50 35 127 4.5E-6 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS06210 f926420cc2a5d63b4cca8b4bcf155bfa 131 SUPERFAMILY SSF54427 14 126 1.99E-11 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS06210 f926420cc2a5d63b4cca8b4bcf155bfa 131 Pfam PF14534 Domain of unknown function (DUF4440) 34 119 8.9E-6 T 22-04-2016 IPR027843 Domain of unknown function DUF4440 RPIC12D_RS04335 5080776ed61e6f2c692083ff856bd9c4 539 Pfam PF09423 PhoD-like phosphatase 165 479 5.0E-83 T 22-04-2016 IPR018946 Alkaline phosphatase D-related RPIC12D_RS04335 5080776ed61e6f2c692083ff856bd9c4 539 PANTHER PTHR22953:SF40 40 206 3.0E-124 T 22-04-2016 RPIC12D_RS04335 5080776ed61e6f2c692083ff856bd9c4 539 PANTHER PTHR22953:SF40 235 437 3.0E-124 T 22-04-2016 RPIC12D_RS04335 5080776ed61e6f2c692083ff856bd9c4 539 SUPERFAMILY SSF56300 152 535 2.35E-37 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS04335 5080776ed61e6f2c692083ff856bd9c4 539 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 56 146 4.2E-21 T 22-04-2016 IPR032093 Phospholipase D, N-terminal RPIC12D_RS04335 5080776ed61e6f2c692083ff856bd9c4 539 Gene3D G3DSA:3.60.21.10 151 537 1.3E-28 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS04335 5080776ed61e6f2c692083ff856bd9c4 539 PANTHER PTHR22953 40 206 3.0E-124 T 22-04-2016 RPIC12D_RS04335 5080776ed61e6f2c692083ff856bd9c4 539 PANTHER PTHR22953 235 437 3.0E-124 T 22-04-2016 RPIC12D_RS15320 6480e0b1d55b87dfb08f8ce88f6867ab 518 PANTHER PTHR30258:SF9 19 518 6.8E-223 T 22-04-2016 RPIC12D_RS15320 6480e0b1d55b87dfb08f8ce88f6867ab 518 SMART SM00382 260 381 1.5E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS15320 6480e0b1d55b87dfb08f8ce88f6867ab 518 Pfam PF00437 Type II/IV secretion system protein 136 399 7.6E-83 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC12D_RS15320 6480e0b1d55b87dfb08f8ce88f6867ab 518 Gene3D G3DSA:3.30.450.90 103 232 6.4E-53 T 22-04-2016 RPIC12D_RS15320 6480e0b1d55b87dfb08f8ce88f6867ab 518 PANTHER PTHR30258 19 518 6.8E-223 T 22-04-2016 RPIC12D_RS15320 6480e0b1d55b87dfb08f8ce88f6867ab 518 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 327 341 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC12D_RS15320 6480e0b1d55b87dfb08f8ce88f6867ab 518 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 22 516 1.9E-219 T 22-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 RPIC12D_RS15320 6480e0b1d55b87dfb08f8ce88f6867ab 518 Gene3D G3DSA:3.40.50.300 238 516 3.4E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15320 6480e0b1d55b87dfb08f8ce88f6867ab 518 SUPERFAMILY SSF52540 109 516 1.24E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15320 6480e0b1d55b87dfb08f8ce88f6867ab 518 SUPERFAMILY SSF160246 22 85 9.42E-8 T 22-04-2016 RPIC12D_RS03455 58ace74e17f1d12d7651bc78fe4d2c18 105 Pfam PF15937 prlF antitoxin for toxin YhaV_toxin 8 101 4.4E-17 T 22-04-2016 IPR031848 PrlF antitoxin GO:0001558|GO:0003700|GO:0097351 RPIC12D_RS03455 58ace74e17f1d12d7651bc78fe4d2c18 105 SMART SM00966 8 53 1.3E-9 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 RPIC12D_RS03455 58ace74e17f1d12d7651bc78fe4d2c18 105 Gene3D G3DSA:2.10.260.10 6 47 4.0E-8 T 22-04-2016 RPIC12D_RS03455 58ace74e17f1d12d7651bc78fe4d2c18 105 SUPERFAMILY SSF89447 3 49 1.03E-10 T 22-04-2016 RPIC12D_RS03455 58ace74e17f1d12d7651bc78fe4d2c18 105 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 9 48 1.8E-9 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 RPIC12D_RS03455 58ace74e17f1d12d7651bc78fe4d2c18 105 ProDom PD030562 SUPPRESSOR HTRA PROTEASE TRANSCRIPTIONAL REGULATOR HTAR SOHA ABRB YDCA BLL1688 7 68 2.0E-8 T 22-04-2016 RPIC12D_RS09780 af507e13cd91223efb1638504a2cefda 900 Pfam PF01433 Peptidase family M1 80 400 8.4E-59 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIC12D_RS09780 af507e13cd91223efb1638504a2cefda 900 Gene3D G3DSA:1.25.50.10 572 900 7.6E-135 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RPIC12D_RS09780 af507e13cd91223efb1638504a2cefda 900 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 318 330 5.4E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIC12D_RS09780 af507e13cd91223efb1638504a2cefda 900 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 181 196 5.4E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIC12D_RS09780 af507e13cd91223efb1638504a2cefda 900 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 263 273 5.4E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIC12D_RS09780 af507e13cd91223efb1638504a2cefda 900 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 299 314 5.4E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIC12D_RS09780 af507e13cd91223efb1638504a2cefda 900 Pfam PF11940 Domain of unknown function (DUF3458) 475 857 4.8E-151 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RPIC12D_RS09780 af507e13cd91223efb1638504a2cefda 900 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 14 899 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 RPIC12D_RS09780 af507e13cd91223efb1638504a2cefda 900 Gene3D G3DSA:1.10.390.10 313 467 6.3E-30 T 22-04-2016 RPIC12D_RS09780 af507e13cd91223efb1638504a2cefda 900 PANTHER PTHR11533:SF152 3 611 0.0 T 22-04-2016 RPIC12D_RS09780 af507e13cd91223efb1638504a2cefda 900 PANTHER PTHR11533:SF152 635 899 0.0 T 22-04-2016 RPIC12D_RS09780 af507e13cd91223efb1638504a2cefda 900 SUPERFAMILY SSF63737 10 197 4.45E-41 T 22-04-2016 RPIC12D_RS09780 af507e13cd91223efb1638504a2cefda 900 PANTHER PTHR11533 3 611 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 RPIC12D_RS09780 af507e13cd91223efb1638504a2cefda 900 PANTHER PTHR11533 635 899 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 RPIC12D_RS09780 af507e13cd91223efb1638504a2cefda 900 SUPERFAMILY SSF55486 212 467 2.75E-71 T 22-04-2016 RPIC12D_RS15400 205c2b77def6f86ec9cbc8660c08a9c6 262 PANTHER PTHR24322:SF25 12 138 8.7E-62 T 22-04-2016 RPIC12D_RS15400 205c2b77def6f86ec9cbc8660c08a9c6 262 PANTHER PTHR24322:SF25 154 186 8.7E-62 T 22-04-2016 RPIC12D_RS15400 205c2b77def6f86ec9cbc8660c08a9c6 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 257 3.8E-46 T 22-04-2016 RPIC12D_RS15400 205c2b77def6f86ec9cbc8660c08a9c6 262 Gene3D G3DSA:3.40.50.720 2 257 4.5E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS15400 205c2b77def6f86ec9cbc8660c08a9c6 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.14E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15400 205c2b77def6f86ec9cbc8660c08a9c6 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.14E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15400 205c2b77def6f86ec9cbc8660c08a9c6 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.14E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15400 205c2b77def6f86ec9cbc8660c08a9c6 262 PANTHER PTHR24322 12 138 8.7E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15400 205c2b77def6f86ec9cbc8660c08a9c6 262 PANTHER PTHR24322 154 186 8.7E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15400 205c2b77def6f86ec9cbc8660c08a9c6 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.03E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15400 205c2b77def6f86ec9cbc8660c08a9c6 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.03E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15400 205c2b77def6f86ec9cbc8660c08a9c6 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.03E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15400 205c2b77def6f86ec9cbc8660c08a9c6 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.03E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15400 205c2b77def6f86ec9cbc8660c08a9c6 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.03E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15400 205c2b77def6f86ec9cbc8660c08a9c6 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.03E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15400 205c2b77def6f86ec9cbc8660c08a9c6 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC12D_RS15400 205c2b77def6f86ec9cbc8660c08a9c6 262 SUPERFAMILY SSF51735 1 257 1.36E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS05845 c0d1dd14bce4fa65d9c3c2e77a3151d5 446 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 446 211.097 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RPIC12D_RS05845 c0d1dd14bce4fa65d9c3c2e77a3151d5 446 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 140 151 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 RPIC12D_RS05845 c0d1dd14bce4fa65d9c3c2e77a3151d5 446 Gene3D G3DSA:3.40.440.10 204 273 5.0E-69 T 22-04-2016 RPIC12D_RS05845 c0d1dd14bce4fa65d9c3c2e77a3151d5 446 Gene3D G3DSA:3.40.440.10 11 101 5.0E-69 T 22-04-2016 RPIC12D_RS05845 c0d1dd14bce4fa65d9c3c2e77a3151d5 446 SUPERFAMILY SSF52540 11 444 1.17E-171 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05845 c0d1dd14bce4fa65d9c3c2e77a3151d5 446 Pfam PF00709 Adenylosuccinate synthetase 12 438 3.4E-172 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RPIC12D_RS05845 c0d1dd14bce4fa65d9c3c2e77a3151d5 446 Gene3D G3DSA:1.10.300.10 111 203 2.9E-37 T 22-04-2016 RPIC12D_RS05845 c0d1dd14bce4fa65d9c3c2e77a3151d5 446 SMART SM00788 11 439 6.9E-297 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RPIC12D_RS05845 c0d1dd14bce4fa65d9c3c2e77a3151d5 446 Gene3D G3DSA:3.90.170.10 274 440 4.0E-63 T 22-04-2016 RPIC12D_RS05845 c0d1dd14bce4fa65d9c3c2e77a3151d5 446 PANTHER PTHR11846 5 443 3.2E-234 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RPIC12D_RS05845 c0d1dd14bce4fa65d9c3c2e77a3151d5 446 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 18 25 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RPIC12D_RS05845 c0d1dd14bce4fa65d9c3c2e77a3151d5 446 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 13 444 1.6E-171 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RPIC12D_RS06305 f014ba23c6714e885979c2d82265ab53 352 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 251 2.3E-48 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RPIC12D_RS06305 f014ba23c6714e885979c2d82265ab53 352 SUPERFAMILY SSF51735 2 337 2.07E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS06305 f014ba23c6714e885979c2d82265ab53 352 PANTHER PTHR10366:SF253 3 332 1.1E-112 T 22-04-2016 RPIC12D_RS06305 f014ba23c6714e885979c2d82265ab53 352 Gene3D G3DSA:3.40.50.720 1 238 1.5E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS06305 f014ba23c6714e885979c2d82265ab53 352 PANTHER PTHR10366 3 332 1.1E-112 T 22-04-2016 RPIC12D_RS06305 f014ba23c6714e885979c2d82265ab53 352 Gene3D G3DSA:3.90.25.10 255 325 1.2E-38 T 22-04-2016 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 Gene3D G3DSA:1.10.287.560 1392 1445 7.4E-5 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 SMART SM00073 1229 1325 0.0073 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 SMART SM00073 1037 1134 0.026 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 SMART SM00073 756 863 1.4E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 Gene3D G3DSA:2.30.30.40 1800 1842 5.4E-20 T 22-04-2016 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 Gene3D G3DSA:2.30.30.40 1713 1734 5.4E-20 T 22-04-2016 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 PANTHER PTHR22617:SF20 1505 1861 5.3E-103 T 22-04-2016 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 PANTHER PTHR22617:SF20 1 20 5.3E-103 T 22-04-2016 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 PANTHER PTHR22617:SF20 1225 1439 5.3E-103 T 22-04-2016 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 Gene3D G3DSA:1.20.120.160 85 169 1.1E-5 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 Gene3D G3DSA:1.20.120.160 755 916 1.8E-26 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1617 1631 8.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1657 1667 8.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1673 1691 8.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1697 1710 8.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 PANTHER PTHR22617 1505 1861 5.3E-103 T 22-04-2016 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 PANTHER PTHR22617 1 20 5.3E-103 T 22-04-2016 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 PANTHER PTHR22617 1225 1439 5.3E-103 T 22-04-2016 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 SUPERFAMILY SSF47226 58 168 1.33E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 SMART SM00448 1885 1998 1.6E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 SUPERFAMILY SSF52172 1887 2005 2.85E-33 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 Gene3D G3DSA:3.40.50.2300 1884 2006 6.8E-35 T 22-04-2016 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 Gene3D G3DSA:1.20.120.160 1016 1142 1.1E-21 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 Gene3D G3DSA:1.20.120.160 1207 1325 1.7E-25 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 SUPERFAMILY SSF50341 1712 1842 1.31E-22 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 Pfam PF01584 CheW-like domain 1717 1846 5.3E-16 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 SMART SM00387 1572 1713 1.1E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 SUPERFAMILY SSF47226 1040 1156 1.7E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 SUPERFAMILY SSF55874 1529 1711 5.34E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 Gene3D G3DSA:3.30.565.10 1528 1712 4.3E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 Pfam PF01627 Hpt domain 1041 1131 1.1E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 Pfam PF01627 Hpt domain 758 857 1.3E-14 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 Pfam PF01627 Hpt domain 1232 1329 1.1E-13 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 SUPERFAMILY SSF47226 1229 1338 3.27E-22 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 SMART SM01231 1390 1527 3.5E-6 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1576 1712 5.6E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 SMART SM00260 1705 1845 6.4E-10 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 SUPERFAMILY SSF47226 755 890 7.33E-23 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS02810 1b1cce603861557994e16cc029b01bb1 2012 Pfam PF00072 Response regulator receiver domain 1887 1998 1.5E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS02445 1f75a40db910853d51d5ab59ef6a2ae6 395 Pfam PF07690 Major Facilitator Superfamily 29 346 1.5E-18 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS02445 1f75a40db910853d51d5ab59ef6a2ae6 395 Gene3D G3DSA:1.20.1250.20 215 383 4.3E-9 T 22-04-2016 RPIC12D_RS02445 1f75a40db910853d51d5ab59ef6a2ae6 395 PANTHER PTHR23514:SF13 22 395 7.6E-102 T 22-04-2016 RPIC12D_RS02445 1f75a40db910853d51d5ab59ef6a2ae6 395 PANTHER PTHR23514 22 395 7.6E-102 T 22-04-2016 RPIC12D_RS02445 1f75a40db910853d51d5ab59ef6a2ae6 395 Gene3D G3DSA:1.20.1250.20 27 196 2.9E-16 T 22-04-2016 RPIC12D_RS02445 1f75a40db910853d51d5ab59ef6a2ae6 395 SUPERFAMILY SSF103473 13 390 6.41E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS14615 89be1fe13ddb2049371121100babb3d6 612 Pfam PF11412 Disulphide bond corrector protein DsbC 33 147 4.5E-32 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RPIC12D_RS14615 89be1fe13ddb2049371121100babb3d6 612 SUPERFAMILY SSF74863 32 147 5.1E-34 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RPIC12D_RS14615 89be1fe13ddb2049371121100babb3d6 612 SUPERFAMILY SSF52833 493 596 3.62E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS14615 89be1fe13ddb2049371121100babb3d6 612 PANTHER PTHR32234 12 603 2.7E-168 T 22-04-2016 RPIC12D_RS14615 89be1fe13ddb2049371121100babb3d6 612 PANTHER PTHR32234:SF0 12 603 2.7E-168 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RPIC12D_RS14615 89be1fe13ddb2049371121100babb3d6 612 Gene3D G3DSA:3.40.30.10 487 599 1.2E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS14615 89be1fe13ddb2049371121100babb3d6 612 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 193 371 2.9E-20 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 RPIC12D_RS14615 89be1fe13ddb2049371121100babb3d6 612 Pfam PF13899 Thioredoxin-like 496 572 2.7E-11 T 22-04-2016 RPIC12D_RS14615 89be1fe13ddb2049371121100babb3d6 612 Gene3D G3DSA:2.60.40.1250 32 149 1.8E-38 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RPIC12D_RS14615 89be1fe13ddb2049371121100babb3d6 612 ProSitePatterns PS00194 Thioredoxin family active site. 508 526 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RPIC12D_RS14615 89be1fe13ddb2049371121100babb3d6 612 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 9 599 37.081 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RPIC12D_RS20105 e9586700bc698fb11b212f3e43724dde 108 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 28 42 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RPIC12D_RS20105 e9586700bc698fb11b212f3e43724dde 108 PANTHER PTHR21600 8 108 6.8E-16 T 22-04-2016 RPIC12D_RS20105 e9586700bc698fb11b212f3e43724dde 108 Pfam PF00849 RNA pseudouridylate synthase 17 78 3.6E-10 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS20105 e9586700bc698fb11b212f3e43724dde 108 PANTHER PTHR21600:SF19 8 108 6.8E-16 T 22-04-2016 RPIC12D_RS20105 e9586700bc698fb11b212f3e43724dde 108 SUPERFAMILY SSF55120 2 107 6.72E-20 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS10155 19db962a89cb90d9dcb96582103edc55 498 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 173 181 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RPIC12D_RS10155 19db962a89cb90d9dcb96582103edc55 498 PANTHER PTHR24031:SF0 5 436 1.5E-182 T 22-04-2016 RPIC12D_RS10155 19db962a89cb90d9dcb96582103edc55 498 SUPERFAMILY SSF52540 94 383 2.88E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10155 19db962a89cb90d9dcb96582103edc55 498 PANTHER PTHR24031 5 436 1.5E-182 T 22-04-2016 RPIC12D_RS10155 19db962a89cb90d9dcb96582103edc55 498 Pfam PF00271 Helicase conserved C-terminal domain 253 363 1.5E-29 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS10155 19db962a89cb90d9dcb96582103edc55 498 SMART SM00490 282 363 2.8E-32 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS10155 19db962a89cb90d9dcb96582103edc55 498 Gene3D G3DSA:3.40.50.300 232 396 1.1E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10155 19db962a89cb90d9dcb96582103edc55 498 Gene3D G3DSA:3.40.50.300 9 231 2.0E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10155 19db962a89cb90d9dcb96582103edc55 498 SMART SM00487 37 242 8.2E-63 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC12D_RS10155 19db962a89cb90d9dcb96582103edc55 498 Pfam PF00270 DEAD/DEAH box helicase 42 216 4.7E-54 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIC12D_RS06770 11e27c64810dfa32290c843efd7b1b86 396 SUPERFAMILY SSF51735 3 150 6.37E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS06770 11e27c64810dfa32290c843efd7b1b86 396 SUPERFAMILY SSF55347 126 267 9.16E-62 T 22-04-2016 RPIC12D_RS06770 11e27c64810dfa32290c843efd7b1b86 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 1.7E-44 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS06770 11e27c64810dfa32290c843efd7b1b86 396 PIRSF PIRSF006205 1 392 3.9E-155 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS06770 11e27c64810dfa32290c843efd7b1b86 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 232 1.4E-39 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS06770 11e27c64810dfa32290c843efd7b1b86 396 Gene3D G3DSA:1.10.1740.10 306 387 1.8E-31 T 22-04-2016 RPIC12D_RS06770 11e27c64810dfa32290c843efd7b1b86 396 Gene3D G3DSA:3.40.50.720 2 150 1.5E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS06770 11e27c64810dfa32290c843efd7b1b86 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 385 47.741 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS06770 11e27c64810dfa32290c843efd7b1b86 396 PANTHER PTHR30525 1 396 1.6E-219 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS06770 11e27c64810dfa32290c843efd7b1b86 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 389 1.6E-157 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS06770 11e27c64810dfa32290c843efd7b1b86 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 264 380 2.7E-43 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS06770 11e27c64810dfa32290c843efd7b1b86 396 SUPERFAMILY SSF69055 296 387 2.09E-32 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS04095 8883f584ce37f1ef08e73673cb725d0d 404 SUPERFAMILY SSF103473 21 400 2.62E-28 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS04095 8883f584ce37f1ef08e73673cb725d0d 404 Gene3D G3DSA:1.20.1250.20 26 210 3.3E-10 T 22-04-2016 RPIC12D_RS04095 8883f584ce37f1ef08e73673cb725d0d 404 Gene3D G3DSA:1.20.1250.20 224 403 5.4E-11 T 22-04-2016 RPIC12D_RS04095 8883f584ce37f1ef08e73673cb725d0d 404 PANTHER PTHR23537 22 404 2.2E-56 T 22-04-2016 RPIC12D_RS04095 8883f584ce37f1ef08e73673cb725d0d 404 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 32 393 3.3E-119 T 22-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB RPIC12D_RS04095 8883f584ce37f1ef08e73673cb725d0d 404 PANTHER PTHR23537:SF1 22 404 2.2E-56 T 22-04-2016 RPIC12D_RS08640 14e86ae4663fe86b99de36dd25c9f0bd 263 SMART SM00382 41 251 3.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS08640 14e86ae4663fe86b99de36dd25c9f0bd 263 PANTHER PTHR24220:SF560 18 258 2.0E-170 T 22-04-2016 RPIC12D_RS08640 14e86ae4663fe86b99de36dd25c9f0bd 263 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 17 263 5.6E-122 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 RPIC12D_RS08640 14e86ae4663fe86b99de36dd25c9f0bd 263 Gene3D G3DSA:3.40.50.300 11 254 2.4E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08640 14e86ae4663fe86b99de36dd25c9f0bd 263 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS08640 14e86ae4663fe86b99de36dd25c9f0bd 263 Pfam PF00005 ABC transporter 32 187 8.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS08640 14e86ae4663fe86b99de36dd25c9f0bd 263 SUPERFAMILY SSF52540 15 249 1.61E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08640 14e86ae4663fe86b99de36dd25c9f0bd 263 PANTHER PTHR24220 18 258 2.0E-170 T 22-04-2016 RPIC12D_RS08960 80ddc5084176b3dd1cdc0370934c973a 511 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 331 493 3.8E-47 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RPIC12D_RS08960 80ddc5084176b3dd1cdc0370934c973a 511 PANTHER PTHR30389 1 511 1.3E-304 T 22-04-2016 RPIC12D_RS08960 80ddc5084176b3dd1cdc0370934c973a 511 Pfam PF05681 Fumarate hydratase (Fumerase) 11 289 2.1E-100 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RPIC12D_RS08960 80ddc5084176b3dd1cdc0370934c973a 511 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 289 4.0E-64 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RPIC12D_RS08960 80ddc5084176b3dd1cdc0370934c973a 511 Gene3D G3DSA:3.20.130.10 307 493 3.2E-72 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RPIC12D_RS08960 80ddc5084176b3dd1cdc0370934c973a 511 PIRSF PIRSF001394 1 510 3.9E-219 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 RPIC12D_RS08960 80ddc5084176b3dd1cdc0370934c973a 511 Pfam PF05683 Fumarase C-terminus 293 494 3.0E-82 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RPIC12D_RS08960 80ddc5084176b3dd1cdc0370934c973a 511 PANTHER PTHR30389:SF1 1 511 1.3E-304 T 22-04-2016 RPIC12D_RS08960 80ddc5084176b3dd1cdc0370934c973a 511 SUPERFAMILY SSF117457 323 493 1.2E-61 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RPIC12D_RS07045 5a239ae63312c4e681ffadfbdc24d8dd 86 Pfam PF06945 Protein of unknown function (DUF1289) 28 71 3.3E-17 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 RPIC12D_RS07045 5a239ae63312c4e681ffadfbdc24d8dd 86 PANTHER PTHR35175 25 73 5.6E-12 T 22-04-2016 RPIC12D_RS07045 5a239ae63312c4e681ffadfbdc24d8dd 86 PANTHER PTHR35175:SF2 25 73 5.6E-12 T 22-04-2016 RPIC12D_RS12825 b73679256252f2f8b4892009ca5117a8 109 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 11 94 1.5E-35 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 RPIC12D_RS12825 b73679256252f2f8b4892009ca5117a8 109 PANTHER PTHR10160 10 96 4.0E-33 T 22-04-2016 RPIC12D_RS01995 b927b39190b7a137611237d295d6a844 687 PANTHER PTHR10799 145 535 1.0E-88 T 22-04-2016 RPIC12D_RS01995 b927b39190b7a137611237d295d6a844 687 Pfam PF00563 EAL domain 441 676 5.0E-74 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS01995 b927b39190b7a137611237d295d6a844 687 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 262 423 3.0E-42 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS01995 b927b39190b7a137611237d295d6a844 687 PANTHER PTHR10799:SF774 145 535 1.0E-88 T 22-04-2016 RPIC12D_RS01995 b927b39190b7a137611237d295d6a844 687 SUPERFAMILY SSF141868 441 684 3.01E-92 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS01995 b927b39190b7a137611237d295d6a844 687 SUPERFAMILY SSF55073 270 427 2.16E-51 T 22-04-2016 IPR029787 Nucleotide cyclase RPIC12D_RS01995 b927b39190b7a137611237d295d6a844 687 Pfam PF03707 Bacterial signalling protein N terminal repeat 54 112 2.2E-21 T 22-04-2016 IPR005330 MHYT domain RPIC12D_RS01995 b927b39190b7a137611237d295d6a844 687 Pfam PF03707 Bacterial signalling protein N terminal repeat 184 248 6.0E-13 T 22-04-2016 IPR005330 MHYT domain RPIC12D_RS01995 b927b39190b7a137611237d295d6a844 687 Pfam PF03707 Bacterial signalling protein N terminal repeat 117 174 2.2E-18 T 22-04-2016 IPR005330 MHYT domain RPIC12D_RS01995 b927b39190b7a137611237d295d6a844 687 Pfam PF00990 Diguanylate cyclase, GGDEF domain 265 420 3.2E-46 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS01995 b927b39190b7a137611237d295d6a844 687 Gene3D G3DSA:3.30.70.270 267 433 3.7E-58 T 22-04-2016 RPIC12D_RS01995 b927b39190b7a137611237d295d6a844 687 Gene3D G3DSA:3.20.20.450 438 685 5.1E-103 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS01995 b927b39190b7a137611237d295d6a844 687 SMART SM00052 435 681 3.3E-126 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS01995 b927b39190b7a137611237d295d6a844 687 SMART SM00267 254 425 3.1E-64 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS13115 4647769cae93267e7d76fe3fa6d59958 155 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 13 152 8.6E-60 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RPIC12D_RS13115 4647769cae93267e7d76fe3fa6d59958 155 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 13 152 1.0E-70 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RPIC12D_RS13115 4647769cae93267e7d76fe3fa6d59958 155 ProSitePatterns PS01029 Dehydroquinase class II signature. 16 33 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RPIC12D_RS13115 4647769cae93267e7d76fe3fa6d59958 155 PANTHER PTHR21272 9 153 1.9E-87 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RPIC12D_RS13115 4647769cae93267e7d76fe3fa6d59958 155 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 155 72.071 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RPIC12D_RS13115 4647769cae93267e7d76fe3fa6d59958 155 Gene3D G3DSA:3.40.50.9100 11 152 4.3E-67 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RPIC12D_RS13115 4647769cae93267e7d76fe3fa6d59958 155 SUPERFAMILY SSF52304 12 153 2.62E-62 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RPIC12D_RS13115 4647769cae93267e7d76fe3fa6d59958 155 PIRSF PIRSF001399 9 154 5.7E-59 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RPIC12D_RS13115 4647769cae93267e7d76fe3fa6d59958 155 Pfam PF01220 Dehydroquinase class II 13 149 1.1E-60 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RPIC12D_RS01710 3bd7f3537478d1c30fdfc162ae8ad209 1345 Pfam PF02754 Cysteine-rich domain 1194 1297 0.015 T 22-04-2016 IPR004017 Cysteine-rich domain RPIC12D_RS01710 3bd7f3537478d1c30fdfc162ae8ad209 1345 Pfam PF02754 Cysteine-rich domain 1069 1158 7.0E-7 T 22-04-2016 IPR004017 Cysteine-rich domain RPIC12D_RS01710 3bd7f3537478d1c30fdfc162ae8ad209 1345 Pfam PF02913 FAD linked oxidases, C-terminal domain 461 575 3.4E-4 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RPIC12D_RS01710 3bd7f3537478d1c30fdfc162ae8ad209 1345 Pfam PF02913 FAD linked oxidases, C-terminal domain 727 815 3.2E-17 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RPIC12D_RS01710 3bd7f3537478d1c30fdfc162ae8ad209 1345 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 924 935 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC12D_RS01710 3bd7f3537478d1c30fdfc162ae8ad209 1345 Pfam PF01565 FAD binding domain 193 338 1.3E-23 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIC12D_RS01710 3bd7f3537478d1c30fdfc162ae8ad209 1345 SUPERFAMILY SSF56176 157 424 7.94E-55 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS01710 3bd7f3537478d1c30fdfc162ae8ad209 1345 Pfam PF13183 4Fe-4S dicluster domain 860 938 6.4E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC12D_RS01710 3bd7f3537478d1c30fdfc162ae8ad209 1345 Pfam PF12447 Protein of unknown function (DUF3683) 19 143 1.1E-53 T 22-04-2016 IPR022153 Protein of unknown function DUF3683 RPIC12D_RS01710 3bd7f3537478d1c30fdfc162ae8ad209 1345 Pfam PF11880 Domain of unknown function (DUF3400) 1301 1345 8.0E-24 T 22-04-2016 IPR021817 Protein of unknown function DUF3400 RPIC12D_RS01710 3bd7f3537478d1c30fdfc162ae8ad209 1345 SUPERFAMILY SSF55103 456 589 3.08E-37 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RPIC12D_RS01710 3bd7f3537478d1c30fdfc162ae8ad209 1345 SUPERFAMILY SSF55103 735 816 3.08E-37 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RPIC12D_RS01710 3bd7f3537478d1c30fdfc162ae8ad209 1345 Gene3D G3DSA:1.10.1060.10 857 957 1.2E-13 T 22-04-2016 RPIC12D_RS01710 3bd7f3537478d1c30fdfc162ae8ad209 1345 Gene3D G3DSA:3.30.43.10 153 309 2.5E-31 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RPIC12D_RS01710 3bd7f3537478d1c30fdfc162ae8ad209 1345 SUPERFAMILY SSF46548 831 955 3.14E-13 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIC12D_RS01710 3bd7f3537478d1c30fdfc162ae8ad209 1345 PANTHER PTHR11748 166 345 6.5E-29 T 22-04-2016 RPIC12D_RS01710 3bd7f3537478d1c30fdfc162ae8ad209 1345 PANTHER PTHR11748 603 821 6.5E-29 T 22-04-2016 RPIC12D_RS01710 3bd7f3537478d1c30fdfc162ae8ad209 1345 PANTHER PTHR11748 407 483 6.5E-29 T 22-04-2016 RPIC12D_RS14500 edfdd012732fad4bcb5ca7f53f8291df 224 PANTHER PTHR36920:SF1 1 224 2.0E-47 T 22-04-2016 RPIC12D_RS14500 edfdd012732fad4bcb5ca7f53f8291df 224 SUPERFAMILY SSF56925 35 224 1.91E-29 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC12D_RS14500 edfdd012732fad4bcb5ca7f53f8291df 224 Gene3D G3DSA:2.40.160.20 36 224 1.8E-54 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC12D_RS14500 edfdd012732fad4bcb5ca7f53f8291df 224 Pfam PF03922 OmpW family 35 224 5.3E-43 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 RPIC12D_RS14500 edfdd012732fad4bcb5ca7f53f8291df 224 PANTHER PTHR36920 1 224 2.0E-47 T 22-04-2016 RPIC12D_RS01265 bcbb1e03619422ee0cfcac31c736f1d0 200 ProSitePatterns PS01007 Transposases, Mutator family, signature. 28 52 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS01265 bcbb1e03619422ee0cfcac31c736f1d0 200 PANTHER PTHR33217 2 195 2.8E-82 T 22-04-2016 RPIC12D_RS01265 bcbb1e03619422ee0cfcac31c736f1d0 200 Pfam PF00872 Transposase, Mutator family 1 174 2.2E-53 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS00445 92fe7f3e36fcc4930db4cbaaec42c0c1 326 Pfam PF00892 EamA-like transporter family 25 159 5.0E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS00445 92fe7f3e36fcc4930db4cbaaec42c0c1 326 PANTHER PTHR12715 20 324 2.3E-71 T 22-04-2016 RPIC12D_RS00445 92fe7f3e36fcc4930db4cbaaec42c0c1 326 PANTHER PTHR12715:SF21 20 324 2.3E-71 T 22-04-2016 RPIC12D_RS00445 92fe7f3e36fcc4930db4cbaaec42c0c1 326 SUPERFAMILY SSF103481 65 160 2.75E-8 T 22-04-2016 RPIC12D_RS00930 ff61da2c2a01a3c0681d952d6e013160 99 Gene3D G3DSA:3.30.70.1460 15 99 1.7E-32 T 22-04-2016 IPR027471 YbeD-like domain RPIC12D_RS00930 ff61da2c2a01a3c0681d952d6e013160 99 SUPERFAMILY SSF117991 15 99 2.22E-27 T 22-04-2016 IPR027471 YbeD-like domain RPIC12D_RS00930 ff61da2c2a01a3c0681d952d6e013160 99 PANTHER PTHR38036 9 99 1.9E-20 T 22-04-2016 RPIC12D_RS00930 ff61da2c2a01a3c0681d952d6e013160 99 PANTHER PTHR38036:SF1 9 99 1.9E-20 T 22-04-2016 RPIC12D_RS00930 ff61da2c2a01a3c0681d952d6e013160 99 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 11 99 23.261 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 RPIC12D_RS00930 ff61da2c2a01a3c0681d952d6e013160 99 Pfam PF04359 Protein of unknown function (DUF493) 17 99 8.7E-31 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 RPIC12D_RS02275 623b2f2637ccf521565abf25d4143ec7 235 Gene3D G3DSA:3.40.50.2300 1 122 2.7E-38 T 22-04-2016 RPIC12D_RS02275 623b2f2637ccf521565abf25d4143ec7 235 SMART SM00448 1 115 8.0E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS02275 623b2f2637ccf521565abf25d4143ec7 235 PANTHER PTHR26402 1 222 9.1E-79 T 22-04-2016 RPIC12D_RS02275 623b2f2637ccf521565abf25d4143ec7 235 Gene3D G3DSA:1.10.10.10 128 222 1.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS02275 623b2f2637ccf521565abf25d4143ec7 235 PANTHER PTHR26402:SF518 1 222 9.1E-79 T 22-04-2016 RPIC12D_RS02275 623b2f2637ccf521565abf25d4143ec7 235 SMART SM00862 148 221 8.9E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS02275 623b2f2637ccf521565abf25d4143ec7 235 Pfam PF00072 Response regulator receiver domain 3 115 5.0E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS02275 623b2f2637ccf521565abf25d4143ec7 235 SUPERFAMILY SSF52172 1 174 2.42E-37 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS02275 623b2f2637ccf521565abf25d4143ec7 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 221 3.8E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS09945 3379ed2b04f7a73e1a8397f8b430180d 247 PANTHER PTHR30292 1 247 5.4E-119 T 22-04-2016 RPIC12D_RS09945 3379ed2b04f7a73e1a8397f8b430180d 247 Pfam PF03746 LamB/YcsF family 4 236 2.4E-92 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF RPIC12D_RS09945 3379ed2b04f7a73e1a8397f8b430180d 247 PANTHER PTHR30292:SF0 1 247 5.4E-119 T 22-04-2016 RPIC12D_RS09945 3379ed2b04f7a73e1a8397f8b430180d 247 SUPERFAMILY SSF88713 3 244 1.33E-91 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIC12D_RS09945 3379ed2b04f7a73e1a8397f8b430180d 247 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 241 43.615 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF RPIC12D_RS09010 5661e77b52a72b315549f646b48bf460 294 Pfam PF01136 Peptidase family U32 106 248 4.3E-12 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC12D_RS09010 5661e77b52a72b315549f646b48bf460 294 PANTHER PTHR30217:SF8 1 288 1.4E-62 T 22-04-2016 RPIC12D_RS09010 5661e77b52a72b315549f646b48bf460 294 PANTHER PTHR30217 1 288 1.4E-62 T 22-04-2016 RPIC12D_RS00860 df06e76702d7a060e0796f7ab07de67e 293 Pfam PF02237 Biotin protein ligase C terminal domain 240 286 1.8E-12 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 RPIC12D_RS00860 df06e76702d7a060e0796f7ab07de67e 293 PANTHER PTHR12835 22 286 3.4E-42 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 RPIC12D_RS00860 df06e76702d7a060e0796f7ab07de67e 293 SUPERFAMILY SSF50037 240 286 1.33E-7 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal RPIC12D_RS00860 df06e76702d7a060e0796f7ab07de67e 293 Gene3D G3DSA:3.30.930.10 20 237 1.9E-46 T 22-04-2016 RPIC12D_RS00860 df06e76702d7a060e0796f7ab07de67e 293 Gene3D G3DSA:2.30.30.100 239 289 2.7E-16 T 22-04-2016 RPIC12D_RS00860 df06e76702d7a060e0796f7ab07de67e 293 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 69 286 6.8E-41 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 RPIC12D_RS00860 df06e76702d7a060e0796f7ab07de67e 293 Pfam PF03099 Biotin/lipoate A/B protein ligase family 72 176 1.8E-12 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RPIC12D_RS00860 df06e76702d7a060e0796f7ab07de67e 293 SUPERFAMILY SSF55681 21 235 1.66E-39 T 22-04-2016 RPIC12D_RS13920 905c7bc27f15897727aaac65754d1c95 443 PANTHER PTHR21266 1 375 1.4E-53 T 22-04-2016 RPIC12D_RS13920 905c7bc27f15897727aaac65754d1c95 443 SUPERFAMILY SSF50022 17 139 2.23E-31 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC12D_RS13920 905c7bc27f15897727aaac65754d1c95 443 Gene3D G3DSA:2.102.10.10 24 140 2.8E-31 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC12D_RS13920 905c7bc27f15897727aaac65754d1c95 443 SUPERFAMILY SSF55961 130 304 5.05E-41 T 22-04-2016 RPIC12D_RS13920 905c7bc27f15897727aaac65754d1c95 443 SUPERFAMILY SSF55961 333 415 5.05E-41 T 22-04-2016 RPIC12D_RS13920 905c7bc27f15897727aaac65754d1c95 443 Pfam PF00355 Rieske [2Fe-2S] domain 26 105 1.8E-16 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC12D_RS13920 905c7bc27f15897727aaac65754d1c95 443 PANTHER PTHR21266:SF23 1 375 1.4E-53 T 22-04-2016 RPIC12D_RS04235 00338c04bb12783da5337eea4488f6b6 231 PANTHER PTHR21299 11 231 6.1E-64 T 22-04-2016 RPIC12D_RS04235 00338c04bb12783da5337eea4488f6b6 231 Pfam PF02224 Cytidylate kinase 13 221 7.1E-74 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RPIC12D_RS04235 00338c04bb12783da5337eea4488f6b6 231 Gene3D G3DSA:3.40.50.300 11 222 1.2E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04235 00338c04bb12783da5337eea4488f6b6 231 SUPERFAMILY SSF52540 8 223 2.27E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04235 00338c04bb12783da5337eea4488f6b6 231 Hamap MF_00238 Cytidylate kinase [cmk]. 11 225 32.205 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RPIC12D_RS04235 00338c04bb12783da5337eea4488f6b6 231 TIGRFAM TIGR00017 cmk: cytidylate kinase 11 219 4.9E-73 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RPIC12D_RS14905 790fca5cd6f9a7c68fe17542e3b837ca 509 PANTHER PTHR33678:SF1 6 501 7.2E-102 T 22-04-2016 RPIC12D_RS14905 790fca5cd6f9a7c68fe17542e3b837ca 509 PANTHER PTHR33678 6 501 7.2E-102 T 22-04-2016 RPIC12D_RS14905 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF03050 Transposase IS66 family 177 458 7.2E-104 T 22-04-2016 IPR004291 Transposase, IS66 RPIC12D_RS14905 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF13817 IS66 C-terminal element 465 502 4.9E-18 T 22-04-2016 RPIC12D_RS14905 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF13005 zinc-finger binding domain of transposase IS66 122 163 9.5E-13 T 22-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 RPIC12D_RS14905 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF13007 Transposase C of IS166 homeodomain 42 114 3.6E-15 T 22-04-2016 IPR024463 Transposase TnpC, homeodomain RPIC12D_RS13365 790fca5cd6f9a7c68fe17542e3b837ca 509 PANTHER PTHR33678:SF1 6 501 7.2E-102 T 22-04-2016 RPIC12D_RS13365 790fca5cd6f9a7c68fe17542e3b837ca 509 PANTHER PTHR33678 6 501 7.2E-102 T 22-04-2016 RPIC12D_RS13365 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF03050 Transposase IS66 family 177 458 7.2E-104 T 22-04-2016 IPR004291 Transposase, IS66 RPIC12D_RS13365 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF13817 IS66 C-terminal element 465 502 4.9E-18 T 22-04-2016 RPIC12D_RS13365 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF13005 zinc-finger binding domain of transposase IS66 122 163 9.5E-13 T 22-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 RPIC12D_RS13365 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF13007 Transposase C of IS166 homeodomain 42 114 3.6E-15 T 22-04-2016 IPR024463 Transposase TnpC, homeodomain RPIC12D_RS04155 790fca5cd6f9a7c68fe17542e3b837ca 509 PANTHER PTHR33678:SF1 6 501 7.2E-102 T 22-04-2016 RPIC12D_RS04155 790fca5cd6f9a7c68fe17542e3b837ca 509 PANTHER PTHR33678 6 501 7.2E-102 T 22-04-2016 RPIC12D_RS04155 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF03050 Transposase IS66 family 177 458 7.2E-104 T 22-04-2016 IPR004291 Transposase, IS66 RPIC12D_RS04155 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF13817 IS66 C-terminal element 465 502 4.9E-18 T 22-04-2016 RPIC12D_RS04155 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF13005 zinc-finger binding domain of transposase IS66 122 163 9.5E-13 T 22-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 RPIC12D_RS04155 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF13007 Transposase C of IS166 homeodomain 42 114 3.6E-15 T 22-04-2016 IPR024463 Transposase TnpC, homeodomain RPIC12D_RS06845 32b3736226f76c4c25d0fef9846d59f6 141 Gene3D G3DSA:2.40.50.140 87 140 0.001 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS06845 32b3736226f76c4c25d0fef9846d59f6 141 Pfam PF01957 NfeD-like C-terminal, partner-binding 7 140 4.8E-9 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain RPIC12D_RS10085 5fd1b03c297ffefe2a8482025e49ab8e 299 PANTHER PTHR30126:SF3 3 296 3.1E-91 T 22-04-2016 RPIC12D_RS10085 5fd1b03c297ffefe2a8482025e49ab8e 299 Gene3D G3DSA:1.10.10.10 3 89 7.0E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS10085 5fd1b03c297ffefe2a8482025e49ab8e 299 SUPERFAMILY SSF46785 2 110 1.04E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS10085 5fd1b03c297ffefe2a8482025e49ab8e 299 Pfam PF03466 LysR substrate binding domain 90 297 6.6E-33 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS10085 5fd1b03c297ffefe2a8482025e49ab8e 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.0E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS10085 5fd1b03c297ffefe2a8482025e49ab8e 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.0E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS10085 5fd1b03c297ffefe2a8482025e49ab8e 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.0E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS10085 5fd1b03c297ffefe2a8482025e49ab8e 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.1E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS10085 5fd1b03c297ffefe2a8482025e49ab8e 299 PANTHER PTHR30126 3 296 3.1E-91 T 22-04-2016 RPIC12D_RS10085 5fd1b03c297ffefe2a8482025e49ab8e 299 Gene3D G3DSA:3.40.190.10 92 179 2.5E-13 T 22-04-2016 RPIC12D_RS10085 5fd1b03c297ffefe2a8482025e49ab8e 299 SUPERFAMILY SSF53850 92 298 5.76E-36 T 22-04-2016 RPIC12D_RS10085 5fd1b03c297ffefe2a8482025e49ab8e 299 Gene3D G3DSA:3.40.190.10 180 265 3.3E-15 T 22-04-2016 RPIC12D_RS04370 77b7640780e7a31eb81599b2fa594814 184 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 16 181 1.4E-38 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RPIC12D_RS04370 77b7640780e7a31eb81599b2fa594814 184 Gene3D G3DSA:2.40.30.60 10 108 7.3E-27 T 22-04-2016 IPR002676 RimM protein GO:0006364 RPIC12D_RS04370 77b7640780e7a31eb81599b2fa594814 184 SUPERFAMILY SSF50447 14 108 3.21E-14 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC12D_RS04370 77b7640780e7a31eb81599b2fa594814 184 Pfam PF05239 PRC-barrel domain 112 179 4.4E-8 T 22-04-2016 IPR027275 PRC-barrel domain RPIC12D_RS04370 77b7640780e7a31eb81599b2fa594814 184 Gene3D G3DSA:2.30.30.240 114 184 4.0E-23 T 22-04-2016 RPIC12D_RS04370 77b7640780e7a31eb81599b2fa594814 184 Pfam PF01782 RimM N-terminal domain 17 105 3.1E-17 T 22-04-2016 IPR002676 RimM protein GO:0006364 RPIC12D_RS04370 77b7640780e7a31eb81599b2fa594814 184 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 15 184 21.448 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RPIC12D_RS04370 77b7640780e7a31eb81599b2fa594814 184 SUPERFAMILY SSF50346 114 181 2.55E-17 T 22-04-2016 IPR011033 PRC-barrel-like RPIC12D_RS04370 77b7640780e7a31eb81599b2fa594814 184 PANTHER PTHR33692 11 183 8.2E-35 T 22-04-2016 RPIC12D_RS11105 8222fcbe66732f90395c1331dc0e9305 629 PANTHER PTHR30069 24 169 1.3E-35 T 22-04-2016 RPIC12D_RS11105 8222fcbe66732f90395c1331dc0e9305 629 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 160 2.2E-26 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS11105 8222fcbe66732f90395c1331dc0e9305 629 Gene3D G3DSA:2.170.130.10 36 167 4.1E-33 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS11105 8222fcbe66732f90395c1331dc0e9305 629 Gene3D G3DSA:2.40.170.20 175 623 3.6E-76 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS11105 8222fcbe66732f90395c1331dc0e9305 629 SUPERFAMILY SSF56935 44 622 9.85E-103 T 22-04-2016 RPIC12D_RS11105 8222fcbe66732f90395c1331dc0e9305 629 Pfam PF00593 TonB dependent receptor 407 622 4.4E-27 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS11105 8222fcbe66732f90395c1331dc0e9305 629 PANTHER PTHR30069:SF10 24 169 1.3E-35 T 22-04-2016 RPIC12D_RS15435 5e5b322015f2e81f8079818c5e790c8d 199 Gene3D G3DSA:1.20.144.10 4 164 2.0E-25 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC12D_RS15435 5e5b322015f2e81f8079818c5e790c8d 199 SUPERFAMILY SSF48317 1 174 1.96E-33 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC12D_RS15435 5e5b322015f2e81f8079818c5e790c8d 199 Pfam PF01569 PAP2 superfamily 57 164 2.3E-15 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC12D_RS15435 5e5b322015f2e81f8079818c5e790c8d 199 PANTHER PTHR14969:SF20 2 156 1.5E-34 T 22-04-2016 RPIC12D_RS15435 5e5b322015f2e81f8079818c5e790c8d 199 PANTHER PTHR14969 2 156 1.5E-34 T 22-04-2016 RPIC12D_RS15435 5e5b322015f2e81f8079818c5e790c8d 199 SMART SM00014 56 165 2.5E-13 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC12D_RS01130 477d771fe0682e3cd144268cc0a0302c 248 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 RPIC12D_RS01130 477d771fe0682e3cd144268cc0a0302c 248 Gene3D G3DSA:3.40.50.1240 1 248 5.1E-95 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC12D_RS01130 477d771fe0682e3cd144268cc0a0302c 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 218 7.5E-34 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC12D_RS01130 477d771fe0682e3cd144268cc0a0302c 248 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 45.074 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 RPIC12D_RS01130 477d771fe0682e3cd144268cc0a0302c 248 SUPERFAMILY SSF53254 1 245 8.49E-78 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC12D_RS01130 477d771fe0682e3cd144268cc0a0302c 248 SMART SM00855 3 189 9.8E-28 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC12D_RS01130 477d771fe0682e3cd144268cc0a0302c 248 PANTHER PTHR11931 1 248 8.9E-155 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 RPIC12D_RS01130 477d771fe0682e3cd144268cc0a0302c 248 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 2 246 5.5E-113 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 RPIC12D_RS02280 1a061116dd018364e37e75f368ac570e 352 SUPERFAMILY SSF52540 13 276 1.64E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS02280 1a061116dd018364e37e75f368ac570e 352 PANTHER PTHR22942:SF1 1 344 5.8E-202 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC12D_RS02280 1a061116dd018364e37e75f368ac570e 352 SUPERFAMILY SSF54752 277 335 3.01E-23 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal RPIC12D_RS02280 1a061116dd018364e37e75f368ac570e 352 Gene3D G3DSA:3.30.250.10 277 335 1.9E-31 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal RPIC12D_RS02280 1a061116dd018364e37e75f368ac570e 352 ProSitePatterns PS00321 recA signature. 222 230 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 RPIC12D_RS02280 1a061116dd018364e37e75f368ac570e 352 Pfam PF00154 recA bacterial DNA recombination protein 16 277 2.6E-142 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC12D_RS02280 1a061116dd018364e37e75f368ac570e 352 Hamap MF_00268 Protein RecA [recA]. 14 338 52.082 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC12D_RS02280 1a061116dd018364e37e75f368ac570e 352 Gene3D G3DSA:3.40.50.300 39 276 8.4E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS02280 1a061116dd018364e37e75f368ac570e 352 PRINTS PR00142 RecA protein signature 102 131 3.6E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC12D_RS02280 1a061116dd018364e37e75f368ac570e 352 PRINTS PR00142 RecA protein signature 252 281 3.6E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC12D_RS02280 1a061116dd018364e37e75f368ac570e 352 PRINTS PR00142 RecA protein signature 219 247 3.6E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC12D_RS02280 1a061116dd018364e37e75f368ac570e 352 PRINTS PR00142 RecA protein signature 306 323 3.6E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC12D_RS02280 1a061116dd018364e37e75f368ac570e 352 PRINTS PR00142 RecA protein signature 136 165 3.6E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC12D_RS02280 1a061116dd018364e37e75f368ac570e 352 PRINTS PR00142 RecA protein signature 174 203 3.6E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC12D_RS02280 1a061116dd018364e37e75f368ac570e 352 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 13 333 2.8E-173 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC12D_RS02280 1a061116dd018364e37e75f368ac570e 352 PANTHER PTHR22942 1 344 5.8E-202 T 22-04-2016 RPIC12D_RS02280 1a061116dd018364e37e75f368ac570e 352 SMART SM00382 66 237 1.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS13925 e60e85a661be2d9553b43fd8fd6e7098 391 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 231 1.6E-6 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS13925 e60e85a661be2d9553b43fd8fd6e7098 391 SUPERFAMILY SSF51735 3 153 2.54E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS13925 e60e85a661be2d9553b43fd8fd6e7098 391 PANTHER PTHR22604 4 267 6.3E-60 T 22-04-2016 RPIC12D_RS13925 e60e85a661be2d9553b43fd8fd6e7098 391 PANTHER PTHR22604 284 295 6.3E-60 T 22-04-2016 RPIC12D_RS13925 e60e85a661be2d9553b43fd8fd6e7098 391 PANTHER PTHR22604 330 391 6.3E-60 T 22-04-2016 RPIC12D_RS13925 e60e85a661be2d9553b43fd8fd6e7098 391 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 124 2.2E-26 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RPIC12D_RS13925 e60e85a661be2d9553b43fd8fd6e7098 391 Gene3D G3DSA:3.30.360.10 141 257 6.0E-22 T 22-04-2016 RPIC12D_RS13925 e60e85a661be2d9553b43fd8fd6e7098 391 Gene3D G3DSA:3.30.360.10 333 391 6.0E-22 T 22-04-2016 RPIC12D_RS13925 e60e85a661be2d9553b43fd8fd6e7098 391 SUPERFAMILY SSF55347 132 245 6.05E-17 T 22-04-2016 RPIC12D_RS13925 e60e85a661be2d9553b43fd8fd6e7098 391 Gene3D G3DSA:3.40.50.720 2 140 8.2E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS12055 0c77a2012e5819ba9b69ca38529e5936 343 PIRSF PIRSF026166 6 342 2.1E-106 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter RPIC12D_RS12055 0c77a2012e5819ba9b69ca38529e5936 343 PANTHER PTHR18640 14 335 6.1E-91 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter RPIC12D_RS12055 0c77a2012e5819ba9b69ca38529e5936 343 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 15 325 3.4E-99 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter RPIC12D_RS04745 6527f27111631519b0828871f9975086 133 Gene3D G3DSA:3.90.1010.10 2 129 2.0E-56 T 22-04-2016 RPIC12D_RS04745 6527f27111631519b0828871f9975086 133 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 9.7E-69 T 22-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 RPIC12D_RS04745 6527f27111631519b0828871f9975086 133 SUPERFAMILY SSF82649 2 126 2.2E-48 T 22-04-2016 RPIC12D_RS04745 6527f27111631519b0828871f9975086 133 PANTHER PTHR10093:SF3 1 126 7.2E-95 T 22-04-2016 RPIC12D_RS04745 6527f27111631519b0828871f9975086 133 PANTHER PTHR10093 1 126 7.2E-95 T 22-04-2016 RPIC12D_RS04745 6527f27111631519b0828871f9975086 133 Pfam PF01592 NifU-like N terminal domain 3 125 9.0E-56 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 RPIC12D_RS23000 a15e6511c54228fea63fae72dda754e6 243 PANTHER PTHR24093:SF50 48 236 4.0E-25 T 22-04-2016 RPIC12D_RS23000 a15e6511c54228fea63fae72dda754e6 243 Pfam PF00403 Heavy-metal-associated domain 66 126 1.4E-11 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC12D_RS23000 a15e6511c54228fea63fae72dda754e6 243 PANTHER PTHR24093 48 236 4.0E-25 T 22-04-2016 RPIC12D_RS23000 a15e6511c54228fea63fae72dda754e6 243 ProSitePatterns PS01047 Heavy-metal-associated domain. 68 97 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RPIC12D_RS23000 a15e6511c54228fea63fae72dda754e6 243 SUPERFAMILY SSF55008 59 131 3.14E-20 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC12D_RS23000 a15e6511c54228fea63fae72dda754e6 243 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 2 57 7.7E-7 T 22-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase RPIC12D_RS23000 a15e6511c54228fea63fae72dda754e6 243 Gene3D G3DSA:3.30.70.100 62 129 3.4E-21 T 22-04-2016 RPIC12D_RS27085 4382b1f5de9b52bf4391db56351309a5 292 Pfam PF01381 Helix-turn-helix 36 79 5.1E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC12D_RS27085 4382b1f5de9b52bf4391db56351309a5 292 Gene3D G3DSA:2.10.109.10 163 284 1.8E-20 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RPIC12D_RS27085 4382b1f5de9b52bf4391db56351309a5 292 SUPERFAMILY SSF47413 31 93 1.63E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS27085 4382b1f5de9b52bf4391db56351309a5 292 PANTHER PTHR40661 140 283 4.7E-16 T 22-04-2016 RPIC12D_RS27085 4382b1f5de9b52bf4391db56351309a5 292 Pfam PF00717 Peptidase S24-like 202 270 5.9E-11 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B RPIC12D_RS27085 4382b1f5de9b52bf4391db56351309a5 292 SUPERFAMILY SSF51306 165 284 1.96E-20 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RPIC12D_RS27085 4382b1f5de9b52bf4391db56351309a5 292 Gene3D G3DSA:1.10.260.40 5 88 1.1E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS10135 8968474400d6476a8206ace447daefc8 190 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 RPIC12D_RS10135 8968474400d6476a8206ace447daefc8 190 PANTHER PTHR30546 1 190 4.6E-33 T 22-04-2016 RPIC12D_RS10135 8968474400d6476a8206ace447daefc8 190 Gene3D G3DSA:3.40.50.360 1 188 5.1E-58 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC12D_RS10135 8968474400d6476a8206ace447daefc8 190 SUPERFAMILY SSF52218 1 182 6.81E-45 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC12D_RS10135 8968474400d6476a8206ace447daefc8 190 Pfam PF03358 NADPH-dependent FMN reductase 46 130 5.0E-9 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RPIC12D_RS10135 8968474400d6476a8206ace447daefc8 190 PANTHER PTHR30546:SF0 1 190 4.6E-33 T 22-04-2016 RPIC12D_RS13340 dbbb5389ebccdcbf16becaa7ee105258 252 Pfam PF13391 HNH endonuclease 150 202 1.1E-8 T 22-04-2016 IPR003615 HNH nuclease RPIC12D_RS05585 5195139a30fb7c63eae403b224d40f3c 215 SUPERFAMILY SSF54001 58 180 2.94E-41 T 22-04-2016 RPIC12D_RS05585 5195139a30fb7c63eae403b224d40f3c 215 PANTHER PTHR21666 59 181 3.4E-38 T 22-04-2016 RPIC12D_RS05585 5195139a30fb7c63eae403b224d40f3c 215 Gene3D G3DSA:3.90.1720.10 58 179 5.9E-44 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC12D_RS05585 5195139a30fb7c63eae403b224d40f3c 215 Pfam PF00877 NlpC/P60 family 72 178 5.7E-29 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC12D_RS06200 fdd5bd23c42f247903722f825c35ed43 327 SUPERFAMILY SSF51395 1 297 7.0E-72 T 22-04-2016 RPIC12D_RS06200 fdd5bd23c42f247903722f825c35ed43 327 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 77 95 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC12D_RS06200 fdd5bd23c42f247903722f825c35ed43 327 PIRSF PIRSF006621 1 320 3.1E-70 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC12D_RS06200 fdd5bd23c42f247903722f825c35ed43 327 PANTHER PTHR11082:SF29 1 325 7.1E-139 T 22-04-2016 RPIC12D_RS06200 fdd5bd23c42f247903722f825c35ed43 327 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 309 47.048 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 RPIC12D_RS06200 fdd5bd23c42f247903722f825c35ed43 327 PANTHER PTHR11082 1 325 7.1E-139 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC12D_RS06200 fdd5bd23c42f247903722f825c35ed43 327 Gene3D G3DSA:3.20.20.70 1 235 1.6E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS06200 fdd5bd23c42f247903722f825c35ed43 327 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 295 9.0E-132 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 RPIC12D_RS06200 fdd5bd23c42f247903722f825c35ed43 327 Pfam PF01207 Dihydrouridine synthase (Dus) 1 307 6.9E-80 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC12D_RS03055 f60eff245fd872a32fc3f5fcb166d0d7 383 Gene3D G3DSA:2.40.10.10 168 284 9.2E-47 T 22-04-2016 RPIC12D_RS03055 f60eff245fd872a32fc3f5fcb166d0d7 383 PRINTS PR00834 HtrA/DegQ protease family signature 328 340 3.6E-48 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS03055 f60eff245fd872a32fc3f5fcb166d0d7 383 PRINTS PR00834 HtrA/DegQ protease family signature 174 198 3.6E-48 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS03055 f60eff245fd872a32fc3f5fcb166d0d7 383 PRINTS PR00834 HtrA/DegQ protease family signature 111 123 3.6E-48 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS03055 f60eff245fd872a32fc3f5fcb166d0d7 383 PRINTS PR00834 HtrA/DegQ protease family signature 132 152 3.6E-48 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS03055 f60eff245fd872a32fc3f5fcb166d0d7 383 PRINTS PR00834 HtrA/DegQ protease family signature 212 229 3.6E-48 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS03055 f60eff245fd872a32fc3f5fcb166d0d7 383 PRINTS PR00834 HtrA/DegQ protease family signature 234 251 3.6E-48 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS03055 f60eff245fd872a32fc3f5fcb166d0d7 383 PANTHER PTHR22939 46 383 7.2E-111 T 22-04-2016 RPIC12D_RS03055 f60eff245fd872a32fc3f5fcb166d0d7 383 SUPERFAMILY SSF50494 68 276 2.29E-61 T 22-04-2016 IPR009003 Peptidase S1, PA clan RPIC12D_RS03055 f60eff245fd872a32fc3f5fcb166d0d7 383 Pfam PF13365 Trypsin-like peptidase domain 102 241 2.2E-34 T 22-04-2016 RPIC12D_RS03055 f60eff245fd872a32fc3f5fcb166d0d7 383 Gene3D G3DSA:2.40.10.10 59 167 3.6E-29 T 22-04-2016 RPIC12D_RS03055 f60eff245fd872a32fc3f5fcb166d0d7 383 SMART SM00228 280 370 1.6E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS03055 f60eff245fd872a32fc3f5fcb166d0d7 383 Pfam PF13180 PDZ domain 280 379 7.3E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS03055 f60eff245fd872a32fc3f5fcb166d0d7 383 Gene3D G3DSA:2.30.42.10 297 378 1.6E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS03055 f60eff245fd872a32fc3f5fcb166d0d7 383 SUPERFAMILY SSF50156 238 371 2.37E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS03055 f60eff245fd872a32fc3f5fcb166d0d7 383 PANTHER PTHR22939:SF81 46 383 7.2E-111 T 22-04-2016 RPIC12D_RS06240 9f0a650b8fff9e059c3a9d6a6d3f07e1 330 SUPERFAMILY SSF53774 3 321 5.5E-88 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RPIC12D_RS06240 9f0a650b8fff9e059c3a9d6a6d3f07e1 330 Gene3D G3DSA:3.40.50.40 219 322 5.1E-30 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain RPIC12D_RS06240 9f0a650b8fff9e059c3a9d6a6d3f07e1 330 Gene3D G3DSA:3.40.50.1170 2 202 2.8E-61 T 22-04-2016 IPR027474 L-asparaginase, N-terminal RPIC12D_RS06240 9f0a650b8fff9e059c3a9d6a6d3f07e1 330 PANTHER PTHR11707:SF29 1 315 4.6E-75 T 22-04-2016 RPIC12D_RS06240 9f0a650b8fff9e059c3a9d6a6d3f07e1 330 Pfam PF00710 Asparaginase, N-terminal 6 200 3.2E-56 T 22-04-2016 IPR027474 L-asparaginase, N-terminal RPIC12D_RS06240 9f0a650b8fff9e059c3a9d6a6d3f07e1 330 PANTHER PTHR11707 1 315 4.6E-75 T 22-04-2016 RPIC12D_RS06240 9f0a650b8fff9e059c3a9d6a6d3f07e1 330 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 88 98 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 RPIC12D_RS06240 9f0a650b8fff9e059c3a9d6a6d3f07e1 330 SMART SM00870 5 321 3.4E-121 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RPIC12D_RS06240 9f0a650b8fff9e059c3a9d6a6d3f07e1 330 PIRSF PIRSF001220 1 329 2.3E-77 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RPIC12D_RS06240 9f0a650b8fff9e059c3a9d6a6d3f07e1 330 PRINTS PR00139 Asparaginase/glutaminase family signature 265 283 1.5E-21 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RPIC12D_RS06240 9f0a650b8fff9e059c3a9d6a6d3f07e1 330 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 1.5E-21 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RPIC12D_RS06240 9f0a650b8fff9e059c3a9d6a6d3f07e1 330 PRINTS PR00139 Asparaginase/glutaminase family signature 87 105 1.5E-21 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RPIC12D_RS06240 9f0a650b8fff9e059c3a9d6a6d3f07e1 330 PIRSF PIRSF500176 2 327 1.9E-71 T 22-04-2016 RPIC12D_RS06240 9f0a650b8fff9e059c3a9d6a6d3f07e1 330 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 RPIC12D_RS17025 69c09056a5811980f15839cc1d7ad73a 308 Hamap MF_00082_B Acetylglutamate kinase [argB]. 39 307 35.848 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS17025 69c09056a5811980f15839cc1d7ad73a 308 TIGRFAM TIGR00761 argB: acetylglutamate kinase 42 282 1.3E-75 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS17025 69c09056a5811980f15839cc1d7ad73a 308 Pfam PF00696 Amino acid kinase family 41 284 1.2E-44 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC12D_RS17025 69c09056a5811980f15839cc1d7ad73a 308 Hamap MF_00082_A Acetylglutamate kinase [argB]. 42 292 28.935 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS17025 69c09056a5811980f15839cc1d7ad73a 308 PANTHER PTHR23342 24 306 6.4E-109 T 22-04-2016 RPIC12D_RS17025 69c09056a5811980f15839cc1d7ad73a 308 Gene3D G3DSA:3.40.1160.10 39 306 1.0E-102 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC12D_RS17025 69c09056a5811980f15839cc1d7ad73a 308 PRINTS PR00474 Glutamate 5-kinase family signature 257 277 3.3E-7 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RPIC12D_RS17025 69c09056a5811980f15839cc1d7ad73a 308 PRINTS PR00474 Glutamate 5-kinase family signature 72 86 3.3E-7 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RPIC12D_RS17025 69c09056a5811980f15839cc1d7ad73a 308 PRINTS PR00474 Glutamate 5-kinase family signature 207 234 3.3E-7 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RPIC12D_RS17025 69c09056a5811980f15839cc1d7ad73a 308 PIRSF PIRSF000728 26 307 1.2E-103 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS17025 69c09056a5811980f15839cc1d7ad73a 308 SUPERFAMILY SSF53633 24 307 8.77E-89 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC12D_RS03075 8fa6d8cca886a44273ecb70a06a7fd00 146 ProSitePatterns PS00194 Thioredoxin family active site. 61 79 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RPIC12D_RS03075 8fa6d8cca886a44273ecb70a06a7fd00 146 SUPERFAMILY SSF52833 27 144 5.39E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS03075 8fa6d8cca886a44273ecb70a06a7fd00 146 Pfam PF00085 Thioredoxin 42 141 4.5E-29 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RPIC12D_RS03075 8fa6d8cca886a44273ecb70a06a7fd00 146 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 141 3.2E-31 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC12D_RS03075 8fa6d8cca886a44273ecb70a06a7fd00 146 PANTHER PTHR10438:SF281 25 139 1.4E-42 T 22-04-2016 RPIC12D_RS03075 8fa6d8cca886a44273ecb70a06a7fd00 146 PRINTS PR00421 Thioredoxin family signature 108 119 4.0E-9 T 22-04-2016 RPIC12D_RS03075 8fa6d8cca886a44273ecb70a06a7fd00 146 PRINTS PR00421 Thioredoxin family signature 68 77 4.0E-9 T 22-04-2016 RPIC12D_RS03075 8fa6d8cca886a44273ecb70a06a7fd00 146 PRINTS PR00421 Thioredoxin family signature 60 68 4.0E-9 T 22-04-2016 RPIC12D_RS03075 8fa6d8cca886a44273ecb70a06a7fd00 146 PANTHER PTHR10438 25 139 1.4E-42 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC12D_RS03075 8fa6d8cca886a44273ecb70a06a7fd00 146 Gene3D G3DSA:3.40.30.10 36 144 3.8E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS09355 a8e98816d7bfb38b08e8f8b3020dad7d 229 PANTHER PTHR33620 1 229 3.0E-34 T 22-04-2016 RPIC12D_RS09355 a8e98816d7bfb38b08e8f8b3020dad7d 229 Hamap MF_01385 Urease accessory protein UreF [ureF]. 6 229 29.861 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 RPIC12D_RS09355 a8e98816d7bfb38b08e8f8b3020dad7d 229 PIRSF PIRSF009467 3 229 5.8E-64 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 RPIC12D_RS09355 a8e98816d7bfb38b08e8f8b3020dad7d 229 Pfam PF01730 UreF 38 184 2.9E-37 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 RPIC12D_RS08360 bd2d27fe5c5d054959e0a5ab82dd6ce8 444 PANTHER PTHR11808 5 236 4.3E-211 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RPIC12D_RS08360 bd2d27fe5c5d054959e0a5ab82dd6ce8 444 PANTHER PTHR11808 266 427 4.3E-211 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RPIC12D_RS08360 bd2d27fe5c5d054959e0a5ab82dd6ce8 444 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 5 422 2.6E-171 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 RPIC12D_RS08360 bd2d27fe5c5d054959e0a5ab82dd6ce8 444 PIRSF PIRSF001434 1 426 1.8E-131 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RPIC12D_RS08360 bd2d27fe5c5d054959e0a5ab82dd6ce8 444 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 423 1.4E-132 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RPIC12D_RS08360 bd2d27fe5c5d054959e0a5ab82dd6ce8 444 PANTHER PTHR11808:SF12 5 236 4.3E-211 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 RPIC12D_RS08360 bd2d27fe5c5d054959e0a5ab82dd6ce8 444 PANTHER PTHR11808:SF12 266 427 4.3E-211 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 RPIC12D_RS08360 bd2d27fe5c5d054959e0a5ab82dd6ce8 444 Gene3D G3DSA:3.40.640.10 5 287 1.1E-110 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS08360 bd2d27fe5c5d054959e0a5ab82dd6ce8 444 SUPERFAMILY SSF53383 5 423 1.24E-122 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS08360 bd2d27fe5c5d054959e0a5ab82dd6ce8 444 Gene3D G3DSA:3.90.1150.10 289 425 7.0E-49 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS08360 bd2d27fe5c5d054959e0a5ab82dd6ce8 444 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RPIC12D_RS08235 7a23c16de618a6ff6f97714790eae512 111 PANTHER PTHR33930 3 105 3.6E-27 T 22-04-2016 RPIC12D_RS08235 7a23c16de618a6ff6f97714790eae512 111 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 38 88 1.4E-19 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS08235 7a23c16de618a6ff6f97714790eae512 111 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 103 1.3E-19 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS08235 7a23c16de618a6ff6f97714790eae512 111 PANTHER PTHR33930:SF2 3 105 3.6E-27 T 22-04-2016 RPIC12D_RS08235 7a23c16de618a6ff6f97714790eae512 111 Gene3D G3DSA:1.20.1290.10 4 108 2.8E-33 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS08235 7a23c16de618a6ff6f97714790eae512 111 SUPERFAMILY SSF69118 5 105 4.71E-26 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS07075 e0eb43146406fbccaf15c999f413c2bf 238 Pfam PF02308 MgtC family 19 139 1.9E-32 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RPIC12D_RS07075 e0eb43146406fbccaf15c999f413c2bf 238 PRINTS PR01837 MgtC/SapB protein signature 41 59 1.6E-39 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RPIC12D_RS07075 e0eb43146406fbccaf15c999f413c2bf 238 PRINTS PR01837 MgtC/SapB protein signature 94 118 1.6E-39 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RPIC12D_RS07075 e0eb43146406fbccaf15c999f413c2bf 238 PRINTS PR01837 MgtC/SapB protein signature 67 89 1.6E-39 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RPIC12D_RS07075 e0eb43146406fbccaf15c999f413c2bf 238 PRINTS PR01837 MgtC/SapB protein signature 22 41 1.6E-39 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RPIC12D_RS07075 e0eb43146406fbccaf15c999f413c2bf 238 PANTHER PTHR33778:SF3 1 233 3.2E-74 T 22-04-2016 RPIC12D_RS07075 e0eb43146406fbccaf15c999f413c2bf 238 PANTHER PTHR33778 1 233 3.2E-74 T 22-04-2016 RPIC12D_RS07115 b9209f9f4169d53235aabb3c558f5ca3 175 SUPERFAMILY SSF54292 4 80 4.46E-25 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS07115 b9209f9f4169d53235aabb3c558f5ca3 175 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 61 1.4E-6 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS07115 b9209f9f4169d53235aabb3c558f5ca3 175 Gene3D G3DSA:3.10.20.30 4 76 1.4E-29 T 22-04-2016 IPR012675 Beta-grasp domain RPIC12D_RS07115 b9209f9f4169d53235aabb3c558f5ca3 175 PANTHER PTHR11908 1 146 1.7E-48 T 22-04-2016 RPIC12D_RS07115 b9209f9f4169d53235aabb3c558f5ca3 175 Pfam PF01799 [2Fe-2S] binding domain 75 147 9.3E-31 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC12D_RS07115 b9209f9f4169d53235aabb3c558f5ca3 175 Gene3D G3DSA:1.10.150.120 77 159 2.3E-37 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC12D_RS07115 b9209f9f4169d53235aabb3c558f5ca3 175 SUPERFAMILY SSF47741 86 154 1.2E-33 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC12D_RS07115 b9209f9f4169d53235aabb3c558f5ca3 175 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RPIC12D_RS00155 6d9ab3a014732b274e76ac4630e1e73c 282 PIRSF PIRSF026649 1 281 3.3E-71 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RPIC12D_RS00155 6d9ab3a014732b274e76ac4630e1e73c 282 PANTHER PTHR30606 3 271 4.6E-42 T 22-04-2016 RPIC12D_RS00155 6d9ab3a014732b274e76ac4630e1e73c 282 PANTHER PTHR30606:SF5 3 271 4.6E-42 T 22-04-2016 RPIC12D_RS00155 6d9ab3a014732b274e76ac4630e1e73c 282 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 271 7.4E-31 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RPIC12D_RS13630 e22bcb65f789c148383a1b1286131892 413 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 39 412 40.278 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 RPIC12D_RS13630 e22bcb65f789c148383a1b1286131892 413 Pfam PF01098 Cell cycle protein 44 405 6.8E-106 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RPIC12D_RS13630 e22bcb65f789c148383a1b1286131892 413 PANTHER PTHR30474:SF2 24 405 3.3E-142 T 22-04-2016 RPIC12D_RS13630 e22bcb65f789c148383a1b1286131892 413 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 42 403 1.6E-123 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 RPIC12D_RS13630 e22bcb65f789c148383a1b1286131892 413 PANTHER PTHR30474 24 405 3.3E-142 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RPIC12D_RS07625 a75a88532e431dc76a36fc6bf2c4d95b 422 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 223 415 1.9E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS07625 a75a88532e431dc76a36fc6bf2c4d95b 422 PANTHER PTHR30193:SF8 3 71 8.4E-141 T 22-04-2016 RPIC12D_RS07625 a75a88532e431dc76a36fc6bf2c4d95b 422 PANTHER PTHR30193:SF8 183 416 8.4E-141 T 22-04-2016 RPIC12D_RS07625 a75a88532e431dc76a36fc6bf2c4d95b 422 PANTHER PTHR30193 3 71 8.4E-141 T 22-04-2016 RPIC12D_RS07625 a75a88532e431dc76a36fc6bf2c4d95b 422 PANTHER PTHR30193 183 416 8.4E-141 T 22-04-2016 RPIC12D_RS07625 a75a88532e431dc76a36fc6bf2c4d95b 422 SUPERFAMILY SSF161098 198 410 1.7E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS07625 a75a88532e431dc76a36fc6bf2c4d95b 422 Gene3D G3DSA:1.10.3720.10 154 155 7.2E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS07625 a75a88532e431dc76a36fc6bf2c4d95b 422 Gene3D G3DSA:1.10.3720.10 22 71 7.2E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS07625 a75a88532e431dc76a36fc6bf2c4d95b 422 Gene3D G3DSA:1.10.3720.10 194 411 7.2E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS14420 7c46f29be8204140cfb51b3100c2a64c 442 Pfam PF00815 Histidinol dehydrogenase 28 436 5.4E-167 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC12D_RS14420 7c46f29be8204140cfb51b3100c2a64c 442 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 238 270 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC12D_RS14420 7c46f29be8204140cfb51b3100c2a64c 442 PRINTS PR00083 Histidinol dehydrogenase signature 145 171 1.3E-82 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC12D_RS14420 7c46f29be8204140cfb51b3100c2a64c 442 PRINTS PR00083 Histidinol dehydrogenase signature 370 388 1.3E-82 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC12D_RS14420 7c46f29be8204140cfb51b3100c2a64c 442 PRINTS PR00083 Histidinol dehydrogenase signature 238 259 1.3E-82 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC12D_RS14420 7c46f29be8204140cfb51b3100c2a64c 442 PRINTS PR00083 Histidinol dehydrogenase signature 329 354 1.3E-82 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC12D_RS14420 7c46f29be8204140cfb51b3100c2a64c 442 PRINTS PR00083 Histidinol dehydrogenase signature 209 234 1.3E-82 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC12D_RS14420 7c46f29be8204140cfb51b3100c2a64c 442 PRINTS PR00083 Histidinol dehydrogenase signature 37 61 1.3E-82 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC12D_RS14420 7c46f29be8204140cfb51b3100c2a64c 442 PRINTS PR00083 Histidinol dehydrogenase signature 179 205 1.3E-82 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC12D_RS14420 7c46f29be8204140cfb51b3100c2a64c 442 PRINTS PR00083 Histidinol dehydrogenase signature 260 279 1.3E-82 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC12D_RS14420 7c46f29be8204140cfb51b3100c2a64c 442 PIRSF PIRSF000099 3 438 7.1E-158 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC12D_RS14420 7c46f29be8204140cfb51b3100c2a64c 442 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 38 435 2.0E-159 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC12D_RS14420 7c46f29be8204140cfb51b3100c2a64c 442 SUPERFAMILY SSF53720 31 436 1.71E-85 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS14420 7c46f29be8204140cfb51b3100c2a64c 442 Gene3D G3DSA:3.40.50.1980 31 248 9.0E-78 T 22-04-2016 RPIC12D_RS14420 7c46f29be8204140cfb51b3100c2a64c 442 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 3 436 41.943 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC12D_RS14420 7c46f29be8204140cfb51b3100c2a64c 442 PANTHER PTHR21256 3 442 3.0E-199 T 22-04-2016 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 SUPERFAMILY SSF50249 582 688 4.41E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 Pfam PF01588 Putative tRNA binding domain 589 685 2.1E-22 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 Gene3D G3DSA:2.40.50.140 576 688 2.8E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 Pfam PF09334 tRNA synthetases class I (M) 6 399 1.5E-147 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 7.2E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 7.2E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 387 398 7.2E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 7.2E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 254 265 7.2E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 PRINTS PR01041 Methionyl-tRNA synthetase signature 293 308 7.2E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 SUPERFAMILY SSF47323 389 597 6.54E-43 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 Gene3D G3DSA:2.20.28.20 143 174 2.5E-18 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 13 24 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 548 689 1.5E-41 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 534 5.9E-168 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 Pfam PF08264 Anticodon-binding domain of tRNA 423 512 3.1E-6 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 PANTHER PTHR11946:SF86 3 640 4.1E-215 T 22-04-2016 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 Gene3D G3DSA:1.10.730.10 383 539 6.8E-41 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 SUPERFAMILY SSF52374 3 139 4.46E-99 T 22-04-2016 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 SUPERFAMILY SSF52374 174 390 4.46E-99 T 22-04-2016 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 SUPERFAMILY SSF57770 140 174 3.79E-12 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 PANTHER PTHR11946 3 640 4.1E-215 T 22-04-2016 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 Hamap MF_00098 Methionine--tRNA ligase [metG]. 4 550 40.252 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 Gene3D G3DSA:3.40.50.620 4 142 1.0E-87 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS11010 6fcff136c9fc1ec5ab0060aea679fbd7 689 Gene3D G3DSA:3.40.50.620 181 382 1.0E-87 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS00320 e4b0d2d6b2597ea587a565c0eae26d64 317 PANTHER PTHR21708 1 315 5.0E-113 T 22-04-2016 RPIC12D_RS00320 e4b0d2d6b2597ea587a565c0eae26d64 317 Gene3D G3DSA:3.40.50.720 1 181 1.3E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS00320 e4b0d2d6b2597ea587a565c0eae26d64 317 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 145 4.4E-39 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC12D_RS00320 e4b0d2d6b2597ea587a565c0eae26d64 317 PANTHER PTHR21708:SF26 1 315 5.0E-113 T 22-04-2016 RPIC12D_RS00320 e4b0d2d6b2597ea587a565c0eae26d64 317 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 310 3.1E-62 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC12D_RS00320 e4b0d2d6b2597ea587a565c0eae26d64 317 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 185 308 1.7E-19 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC12D_RS00320 e4b0d2d6b2597ea587a565c0eae26d64 317 SUPERFAMILY SSF51735 1 133 2.48E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS00320 e4b0d2d6b2597ea587a565c0eae26d64 317 SUPERFAMILY SSF48179 185 310 1.94E-24 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS00320 e4b0d2d6b2597ea587a565c0eae26d64 317 Gene3D G3DSA:1.10.1040.10 185 309 7.6E-23 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC12D_RS00515 6a41fc34e8b1f8eb0ac8376e853c941d 182 SUPERFAMILY SSF52317 7 177 7.34E-45 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS00515 6a41fc34e8b1f8eb0ac8376e853c941d 182 Gene3D G3DSA:3.40.50.880 5 181 2.2E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS00515 6a41fc34e8b1f8eb0ac8376e853c941d 182 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 9 176 1.3E-48 T 22-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 RPIC12D_RS00515 6a41fc34e8b1f8eb0ac8376e853c941d 182 Pfam PF01965 DJ-1/PfpI family 8 174 2.2E-47 T 22-04-2016 IPR002818 DJ-1/PfpI RPIC12D_RS00515 6a41fc34e8b1f8eb0ac8376e853c941d 182 PANTHER PTHR11019 8 173 5.6E-67 T 22-04-2016 RPIC12D_RS00515 6a41fc34e8b1f8eb0ac8376e853c941d 182 PANTHER PTHR11019:SF115 8 173 5.6E-67 T 22-04-2016 RPIC12D_RS27050 90298efd8236e188e5eef90bb924f880 121 Gene3D G3DSA:1.10.10.10 53 112 1.2E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS27050 90298efd8236e188e5eef90bb924f880 121 SUPERFAMILY SSF46955 53 102 1.52E-6 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC12D_RS05100 9263597e833deb4176f7967b524d0343 412 Pfam PF00589 Phage integrase family 216 377 4.6E-21 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS05100 9263597e833deb4176f7967b524d0343 412 SUPERFAMILY SSF56349 107 385 1.13E-56 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC12D_RS05100 9263597e833deb4176f7967b524d0343 412 Gene3D G3DSA:1.10.443.10 215 384 8.2E-35 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS05100 9263597e833deb4176f7967b524d0343 412 PANTHER PTHR30629 10 404 4.6E-45 T 22-04-2016 RPIC12D_RS05100 9263597e833deb4176f7967b524d0343 412 PANTHER PTHR30629:SF2 10 404 4.6E-45 T 22-04-2016 RPIC12D_RS05100 9263597e833deb4176f7967b524d0343 412 Gene3D G3DSA:1.10.150.130 107 210 3.4E-8 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC12D_RS05100 9263597e833deb4176f7967b524d0343 412 Pfam PF13356 Domain of unknown function (DUF4102) 15 101 2.1E-12 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 Gene3D G3DSA:3.90.226.10 599 838 6.9E-45 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 SUPERFAMILY SSF52096 848 1099 1.62E-65 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 Gene3D G3DSA:2.40.50.100 492 562 3.3E-21 T 22-04-2016 RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 Pfam PF02785 Biotin carboxylase C-terminal domain 343 453 4.3E-28 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 SUPERFAMILY SSF51246 337 456 1.73E-28 T 22-04-2016 IPR011054 Rudiment single hybrid motif RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 291 298 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 Gene3D G3DSA:3.40.50.20 3 128 8.8E-45 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 327 1.2E-58 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 Gene3D G3DSA:3.30.470.20 206 457 9.2E-80 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 Pfam PF00364 Biotin-requiring enzyme 496 562 1.3E-15 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 SUPERFAMILY SSF52096 587 841 1.71E-54 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 SUPERFAMILY SSF52440 2 112 7.05E-40 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 110 1.3E-38 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 Gene3D G3DSA:3.30.1490.20 129 201 3.6E-15 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 519 536 - T 22-04-2016 IPR001882 Biotin-binding site RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 SMART SM00878 343 453 7.5E-41 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 Gene3D G3DSA:3.90.226.10 850 1091 4.0E-57 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 Pfam PF01039 Carboxyl transferase domain 610 1077 9.2E-77 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 SUPERFAMILY SSF51230 489 562 3.66E-19 T 22-04-2016 IPR011053 Single hybrid motif RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 SUPERFAMILY SSF56059 83 335 5.83E-57 T 22-04-2016 RPIC12D_RS10175 1e33e0c3c6fec97d255129fb5f71aa72 1103 PANTHER PTHR18866 1 566 4.0E-209 T 22-04-2016 RPIC12D_RS03615 4ba6c9f74f20e9a3f4ef16f9d16c9dfb 134 PANTHER PTHR31793:SF9 3 132 6.8E-44 T 22-04-2016 RPIC12D_RS03615 4ba6c9f74f20e9a3f4ef16f9d16c9dfb 134 PIRSF PIRSF003230 1 134 3.3E-44 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RPIC12D_RS03615 4ba6c9f74f20e9a3f4ef16f9d16c9dfb 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 8 122 1.2E-32 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RPIC12D_RS03615 4ba6c9f74f20e9a3f4ef16f9d16c9dfb 134 SUPERFAMILY SSF54637 2 131 3.66E-42 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS03615 4ba6c9f74f20e9a3f4ef16f9d16c9dfb 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 4 127 5.8E-49 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- RPIC12D_RS03615 4ba6c9f74f20e9a3f4ef16f9d16c9dfb 134 PANTHER PTHR31793 3 132 6.8E-44 T 22-04-2016 RPIC12D_RS03615 4ba6c9f74f20e9a3f4ef16f9d16c9dfb 134 Gene3D G3DSA:3.10.129.10 2 132 2.9E-51 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS03615 4ba6c9f74f20e9a3f4ef16f9d16c9dfb 134 Pfam PF03061 Thioesterase superfamily 18 102 1.0E-18 T 22-04-2016 IPR006683 Thioesterase domain RPIC12D_RS17100 73fc9b31186ffb11b7441c8615efb62d 303 SUPERFAMILY SSF51735 8 168 8.52E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS17100 73fc9b31186ffb11b7441c8615efb62d 303 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 172 291 2.0E-36 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RPIC12D_RS17100 73fc9b31186ffb11b7441c8615efb62d 303 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 166 4.0E-37 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RPIC12D_RS17100 73fc9b31186ffb11b7441c8615efb62d 303 Gene3D G3DSA:3.40.50.720 7 169 2.9E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS17100 73fc9b31186ffb11b7441c8615efb62d 303 SUPERFAMILY SSF48179 171 293 2.04E-36 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS17100 73fc9b31186ffb11b7441c8615efb62d 303 Gene3D G3DSA:1.10.1040.10 171 292 7.1E-46 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC12D_RS17100 73fc9b31186ffb11b7441c8615efb62d 303 PIRSF PIRSF000103 2 295 2.8E-64 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 RPIC12D_RS17100 73fc9b31186ffb11b7441c8615efb62d 303 PANTHER PTHR22981:SF27 1 292 1.3E-125 T 22-04-2016 RPIC12D_RS17100 73fc9b31186ffb11b7441c8615efb62d 303 PANTHER PTHR22981 1 292 1.3E-125 T 22-04-2016 RPIC12D_RS04775 c528091ce36bfbd109621ff5b1c52118 64 Gene3D G3DSA:1.10.10.600 1 64 1.5E-30 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RPIC12D_RS04775 c528091ce36bfbd109621ff5b1c52118 64 PIRSF PIRSF039003 1 64 6.2E-33 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RPIC12D_RS04775 c528091ce36bfbd109621ff5b1c52118 64 PANTHER PTHR37532 1 64 8.5E-23 T 22-04-2016 RPIC12D_RS04775 c528091ce36bfbd109621ff5b1c52118 64 Pfam PF04384 Iron-sulphur cluster assembly 1 64 4.0E-30 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RPIC12D_RS04775 c528091ce36bfbd109621ff5b1c52118 64 PANTHER PTHR37532:SF1 1 64 8.5E-23 T 22-04-2016 RPIC12D_RS04775 c528091ce36bfbd109621ff5b1c52118 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 1.2E-32 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RPIC12D_RS04775 c528091ce36bfbd109621ff5b1c52118 64 SUPERFAMILY SSF140319 1 62 7.32E-25 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RPIC12D_RS17775 282068ad3b2cce3ed54c07f0d8e8c8c2 121 PANTHER PTHR12715 1 119 3.1E-26 T 22-04-2016 RPIC12D_RS17775 282068ad3b2cce3ed54c07f0d8e8c8c2 121 PANTHER PTHR12715:SF21 1 119 3.1E-26 T 22-04-2016 RPIC12D_RS22160 59b7e2c140d77034c326dec9618c953d 88 SUPERFAMILY SSF103473 6 87 1.44E-10 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS22160 59b7e2c140d77034c326dec9618c953d 88 PANTHER PTHR24064 10 88 4.8E-24 T 22-04-2016 RPIC12D_RS22160 59b7e2c140d77034c326dec9618c953d 88 Gene3D G3DSA:1.20.1250.20 6 88 9.8E-11 T 22-04-2016 RPIC12D_RS22160 59b7e2c140d77034c326dec9618c953d 88 PANTHER PTHR24064:SF234 10 88 4.8E-24 T 22-04-2016 RPIC12D_RS09120 4b8bf4310641e3d6aeabf7e5bec08578 265 Pfam PF00290 Tryptophan synthase alpha chain 8 255 1.8E-85 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RPIC12D_RS09120 4b8bf4310641e3d6aeabf7e5bec08578 265 PANTHER PTHR10314 74 260 3.2E-20 T 22-04-2016 RPIC12D_RS09120 4b8bf4310641e3d6aeabf7e5bec08578 265 PANTHER PTHR10314 1 51 3.2E-20 T 22-04-2016 RPIC12D_RS09120 4b8bf4310641e3d6aeabf7e5bec08578 265 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RPIC12D_RS09120 4b8bf4310641e3d6aeabf7e5bec08578 265 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 259 2.4E-75 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RPIC12D_RS09120 4b8bf4310641e3d6aeabf7e5bec08578 265 PANTHER PTHR10314:SF4 74 260 3.2E-20 T 22-04-2016 RPIC12D_RS09120 4b8bf4310641e3d6aeabf7e5bec08578 265 PANTHER PTHR10314:SF4 1 51 3.2E-20 T 22-04-2016 RPIC12D_RS09120 4b8bf4310641e3d6aeabf7e5bec08578 265 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 34.37 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RPIC12D_RS09120 4b8bf4310641e3d6aeabf7e5bec08578 265 SUPERFAMILY SSF51366 1 252 1.51E-90 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RPIC12D_RS09120 4b8bf4310641e3d6aeabf7e5bec08578 265 Gene3D G3DSA:3.20.20.70 2 264 8.2E-103 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS25185 38e87352948c4ad8b17d96ff6eb49885 218 Gene3D G3DSA:3.30.465.10 96 141 7.1E-8 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC12D_RS25185 38e87352948c4ad8b17d96ff6eb49885 218 Gene3D G3DSA:3.30.465.10 2 62 7.1E-8 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC12D_RS25185 38e87352948c4ad8b17d96ff6eb49885 218 SUPERFAMILY SSF56176 2 141 2.33E-24 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS25185 38e87352948c4ad8b17d96ff6eb49885 218 Pfam PF01565 FAD binding domain 2 55 3.6E-11 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIC12D_RS01100 7c4ca8cd29b5ca08cf157738b5678a67 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 5.3E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC12D_RS01100 7c4ca8cd29b5ca08cf157738b5678a67 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 5.3E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC12D_RS01100 7c4ca8cd29b5ca08cf157738b5678a67 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 5.3E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC12D_RS01100 7c4ca8cd29b5ca08cf157738b5678a67 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 5.1E-33 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC12D_RS01100 7c4ca8cd29b5ca08cf157738b5678a67 89 Gene3D G3DSA:3.30.1340.10 1 87 1.2E-32 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC12D_RS01100 7c4ca8cd29b5ca08cf157738b5678a67 89 SUPERFAMILY SSF55594 1 87 3.4E-30 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC12D_RS01100 7c4ca8cd29b5ca08cf157738b5678a67 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RPIC12D_RS01100 7c4ca8cd29b5ca08cf157738b5678a67 89 PANTHER PTHR33705:SF2 1 89 2.3E-41 T 22-04-2016 RPIC12D_RS01100 7c4ca8cd29b5ca08cf157738b5678a67 89 PANTHER PTHR33705 1 89 2.3E-41 T 22-04-2016 RPIC12D_RS01100 7c4ca8cd29b5ca08cf157738b5678a67 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RPIC12D_RS01100 7c4ca8cd29b5ca08cf157738b5678a67 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 4.1E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC12D_RS11785 9fc01d940e9a4fd4c230f6f510efc5a9 446 PANTHER PTHR30600 378 413 5.5E-69 T 22-04-2016 RPIC12D_RS11785 9fc01d940e9a4fd4c230f6f510efc5a9 446 Gene3D G3DSA:1.10.760.10 43 215 4.1E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS11785 9fc01d940e9a4fd4c230f6f510efc5a9 446 Gene3D G3DSA:1.10.760.10 216 346 3.1E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS11785 9fc01d940e9a4fd4c230f6f510efc5a9 446 Gene3D G3DSA:1.10.760.10 383 408 3.1E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS11785 9fc01d940e9a4fd4c230f6f510efc5a9 446 PANTHER PTHR30600 51 346 5.5E-69 T 22-04-2016 RPIC12D_RS11785 9fc01d940e9a4fd4c230f6f510efc5a9 446 Pfam PF03150 Di-haem cytochrome c peroxidase 47 225 7.5E-30 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 RPIC12D_RS11785 9fc01d940e9a4fd4c230f6f510efc5a9 446 SUPERFAMILY SSF46626 40 186 1.26E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS11785 9fc01d940e9a4fd4c230f6f510efc5a9 446 SUPERFAMILY SSF46626 309 404 5.25E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS11785 9fc01d940e9a4fd4c230f6f510efc5a9 446 SUPERFAMILY SSF46626 202 277 5.25E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS11785 9fc01d940e9a4fd4c230f6f510efc5a9 446 PANTHER PTHR30600:SF5 51 346 5.5E-69 T 22-04-2016 RPIC12D_RS11785 9fc01d940e9a4fd4c230f6f510efc5a9 446 PANTHER PTHR30600:SF5 378 413 5.5E-69 T 22-04-2016 RPIC12D_RS14060 988d21b37a6581ea0613a2734873e07a 162 Gene3D G3DSA:3.90.960.10 10 145 8.4E-28 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC12D_RS14060 988d21b37a6581ea0613a2734873e07a 162 SUPERFAMILY SSF55826 10 146 7.72E-34 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC12D_RS14060 988d21b37a6581ea0613a2734873e07a 162 Pfam PF04073 Aminoacyl-tRNA editing domain 23 142 4.8E-28 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC12D_RS06330 5b88b241bdaa1e8610ea236e97c38a3f 556 PANTHER PTHR33908:SF3 2 441 1.6E-75 T 22-04-2016 RPIC12D_RS06330 5b88b241bdaa1e8610ea236e97c38a3f 556 PANTHER PTHR33908 2 441 1.6E-75 T 22-04-2016 RPIC12D_RS06330 5b88b241bdaa1e8610ea236e97c38a3f 556 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 73 232 7.0E-17 T 22-04-2016 RPIC12D_RS12050 a19b1e16089ead21f548e60fab99d1e9 298 PANTHER PTHR30419:SF3 1 291 1.5E-92 T 22-04-2016 RPIC12D_RS12050 a19b1e16089ead21f548e60fab99d1e9 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12050 a19b1e16089ead21f548e60fab99d1e9 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12050 a19b1e16089ead21f548e60fab99d1e9 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12050 a19b1e16089ead21f548e60fab99d1e9 298 Gene3D G3DSA:3.40.190.10 178 263 7.8E-25 T 22-04-2016 RPIC12D_RS12050 a19b1e16089ead21f548e60fab99d1e9 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.5E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12050 a19b1e16089ead21f548e60fab99d1e9 298 PANTHER PTHR30419 1 291 1.5E-92 T 22-04-2016 RPIC12D_RS12050 a19b1e16089ead21f548e60fab99d1e9 298 Gene3D G3DSA:3.40.190.10 91 177 2.2E-16 T 22-04-2016 RPIC12D_RS12050 a19b1e16089ead21f548e60fab99d1e9 298 SUPERFAMILY SSF46785 3 111 1.36E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12050 a19b1e16089ead21f548e60fab99d1e9 298 Gene3D G3DSA:1.10.10.10 1 83 1.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12050 a19b1e16089ead21f548e60fab99d1e9 298 Pfam PF03466 LysR substrate binding domain 89 292 6.0E-42 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS12050 a19b1e16089ead21f548e60fab99d1e9 298 SUPERFAMILY SSF53850 90 293 5.91E-41 T 22-04-2016 RPIC12D_RS07585 6522141db79746da599a4b8e19208281 768 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 232 355 5.7E-22 T 22-04-2016 IPR018712 Domain of unknown function DUF2235 RPIC12D_RS07585 6522141db79746da599a4b8e19208281 768 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 43 214 1.6E-15 T 22-04-2016 IPR018712 Domain of unknown function DUF2235 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 129 158 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 348 363 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 Gene3D G3DSA:3.40.50.10190 730 807 2.1E-26 T 22-04-2016 IPR001357 BRCT domain RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 PANTHER PTHR23389 532 582 4.3E-177 T 22-04-2016 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 PANTHER PTHR23389 14 514 4.3E-177 T 22-04-2016 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 SUPERFAMILY SSF47781 436 631 7.63E-54 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 SMART SM00532 12 480 1.0E-243 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 SMART SM00278 478 497 290.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 SMART SM00278 561 580 280.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 SMART SM00278 593 612 8.3 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 SMART SM00292 731 808 9.0E-17 T 22-04-2016 IPR001357 BRCT domain RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 Pfam PF12826 Helix-hairpin-helix motif 559 621 2.8E-18 T 22-04-2016 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 20 635 5.0E-202 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 14 335 5.1E-114 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 Gene3D G3DSA:3.30.470.30 133 269 1.5E-51 T 22-04-2016 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 Gene3D G3DSA:1.10.150.20 553 633 9.5E-28 T 22-04-2016 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 PANTHER PTHR23389:SF9 532 582 4.3E-177 T 22-04-2016 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 PANTHER PTHR23389:SF9 14 514 4.3E-177 T 22-04-2016 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 SUPERFAMILY SSF52113 730 807 5.89E-20 T 22-04-2016 IPR001357 BRCT domain RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 Hamap MF_01588 DNA ligase [ligA]. 11 805 57.166 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 Gene3D G3DSA:1.10.150.20 467 552 1.1E-21 T 22-04-2016 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 Gene3D G3DSA:1.10.287.610 12 76 6.8E-29 T 22-04-2016 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 SUPERFAMILY SSF50249 335 415 1.06E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 339 414 2.1E-34 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 Gene3D G3DSA:2.40.50.140 336 408 8.3E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 732 805 1.1E-14 T 22-04-2016 IPR001357 BRCT domain RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 SUPERFAMILY SSF56091 13 333 6.37E-110 T 22-04-2016 RPIC12D_RS06710 f329ee94e2de8ce4f060f267dc1ac9d7 813 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 439 466 5.3E-12 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 RPIC12D_RS03250 9974b51052ba994336bfbd39bf7d9855 165 SMART SM00226 7 145 6.0E-35 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RPIC12D_RS03250 9974b51052ba994336bfbd39bf7d9855 165 Gene3D G3DSA:3.40.50.270 5 143 4.4E-39 T 22-04-2016 RPIC12D_RS03250 9974b51052ba994336bfbd39bf7d9855 165 PANTHER PTHR11717:SF18 10 162 4.0E-33 T 22-04-2016 RPIC12D_RS03250 9974b51052ba994336bfbd39bf7d9855 165 PANTHER PTHR11717 10 162 4.0E-33 T 22-04-2016 RPIC12D_RS03250 9974b51052ba994336bfbd39bf7d9855 165 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 10 137 5.7E-17 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RPIC12D_RS03250 9974b51052ba994336bfbd39bf7d9855 165 SUPERFAMILY SSF52788 7 145 3.4E-39 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RPIC12D_RS17055 8aa5147b17a21c25214612aa3920d5a1 404 Pfam PF00561 alpha/beta hydrolase fold 75 384 8.6E-36 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS17055 8aa5147b17a21c25214612aa3920d5a1 404 Gene3D G3DSA:3.40.50.1820 55 393 1.7E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS17055 8aa5147b17a21c25214612aa3920d5a1 404 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 46 394 2.9E-139 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 RPIC12D_RS17055 8aa5147b17a21c25214612aa3920d5a1 404 PIRSF PIRSF000443 7 403 1.2E-141 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 RPIC12D_RS17055 8aa5147b17a21c25214612aa3920d5a1 404 PANTHER PTHR32268 10 402 2.3E-173 T 22-04-2016 RPIC12D_RS17055 8aa5147b17a21c25214612aa3920d5a1 404 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 32 397 47.978 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 RPIC12D_RS17055 8aa5147b17a21c25214612aa3920d5a1 404 PANTHER PTHR32268:SF11 10 402 2.3E-173 T 22-04-2016 RPIC12D_RS17055 8aa5147b17a21c25214612aa3920d5a1 404 SUPERFAMILY SSF53474 37 393 4.93E-103 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS13585 19dd6ff4702ee75241cd8e1a12da657a 173 Pfam PF05258 Protein of unknown function (DUF721) 17 109 3.3E-5 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 RPIC12D_RS14635 0067864e4e26c1897f24ebc1d5291f6f 207 SMART SM01390 3 96 7.4E-47 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RPIC12D_RS14635 0067864e4e26c1897f24ebc1d5291f6f 207 PANTHER PTHR11831:SF4 1 207 9.4E-88 T 22-04-2016 RPIC12D_RS14635 0067864e4e26c1897f24ebc1d5291f6f 207 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 207 35.31 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS14635 0067864e4e26c1897f24ebc1d5291f6f 207 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 RPIC12D_RS14635 0067864e4e26c1897f24ebc1d5291f6f 207 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 6.3E-31 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RPIC12D_RS14635 0067864e4e26c1897f24ebc1d5291f6f 207 SMART SM00363 97 161 6.8E-15 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS14635 0067864e4e26c1897f24ebc1d5291f6f 207 Gene3D G3DSA:3.10.290.10 103 191 2.1E-32 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS14635 0067864e4e26c1897f24ebc1d5291f6f 207 SUPERFAMILY SSF55174 2 207 6.67E-67 T 22-04-2016 RPIC12D_RS14635 0067864e4e26c1897f24ebc1d5291f6f 207 Pfam PF01479 S4 domain 98 144 3.2E-16 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS14635 0067864e4e26c1897f24ebc1d5291f6f 207 PANTHER PTHR11831 1 207 9.4E-88 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 RPIC12D_RS14635 0067864e4e26c1897f24ebc1d5291f6f 207 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 207 2.5E-79 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS14635 0067864e4e26c1897f24ebc1d5291f6f 207 Gene3D G3DSA:1.10.1050.10 2 102 1.2E-41 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RPIC12D_RS09280 da6ba0bd754a787c2eff0225b08011d1 502 SUPERFAMILY SSF48179 411 494 7.06E-20 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS09280 da6ba0bd754a787c2eff0225b08011d1 502 Gene3D G3DSA:1.10.1040.10 186 282 2.3E-27 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC12D_RS09280 da6ba0bd754a787c2eff0225b08011d1 502 Gene3D G3DSA:1.10.1040.10 411 495 6.7E-21 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC12D_RS09280 da6ba0bd754a787c2eff0225b08011d1 502 Gene3D G3DSA:3.40.50.720 2 185 3.1E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS09280 da6ba0bd754a787c2eff0225b08011d1 502 SUPERFAMILY SSF51735 2 182 1.19E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS09280 da6ba0bd754a787c2eff0225b08011d1 502 PANTHER PTHR23309 388 502 2.3E-215 T 22-04-2016 RPIC12D_RS09280 da6ba0bd754a787c2eff0225b08011d1 502 PANTHER PTHR23309 1 301 2.3E-215 T 22-04-2016 RPIC12D_RS09280 da6ba0bd754a787c2eff0225b08011d1 502 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 411 492 7.0E-18 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC12D_RS09280 da6ba0bd754a787c2eff0225b08011d1 502 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 184 281 2.0E-25 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC12D_RS09280 da6ba0bd754a787c2eff0225b08011d1 502 SUPERFAMILY SSF48179 183 290 5.27E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS09280 da6ba0bd754a787c2eff0225b08011d1 502 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3 181 4.9E-62 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC12D_RS09280 da6ba0bd754a787c2eff0225b08011d1 502 PANTHER PTHR23309:SF12 388 502 2.3E-215 T 22-04-2016 RPIC12D_RS09280 da6ba0bd754a787c2eff0225b08011d1 502 PANTHER PTHR23309:SF12 1 301 2.3E-215 T 22-04-2016 RPIC12D_RS13675 b5a4e94683dd2e9df8e5af117f885c69 217 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 6 217 33.347 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 RPIC12D_RS13675 b5a4e94683dd2e9df8e5af117f885c69 217 PANTHER PTHR11237:SF3 2 217 7.1E-101 T 22-04-2016 RPIC12D_RS13675 b5a4e94683dd2e9df8e5af117f885c69 217 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 57 216 8.2E-45 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 RPIC12D_RS13675 b5a4e94683dd2e9df8e5af117f885c69 217 PANTHER PTHR11237 2 217 7.1E-101 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 RPIC12D_RS13675 b5a4e94683dd2e9df8e5af117f885c69 217 SUPERFAMILY SSF47240 53 132 1.62E-17 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC12D_RS13675 b5a4e94683dd2e9df8e5af117f885c69 217 Gene3D G3DSA:1.20.1260.10 49 187 3.6E-9 T 22-04-2016 IPR012347 Ferritin-related RPIC12D_RS14860 4a18f62ede58bef4e125c27b88dfcf98 231 PANTHER PTHR23105 21 229 1.2E-75 T 22-04-2016 RPIC12D_RS14860 4a18f62ede58bef4e125c27b88dfcf98 231 Gene3D G3DSA:3.40.50.790 69 159 6.2E-42 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RPIC12D_RS14860 4a18f62ede58bef4e125c27b88dfcf98 231 PANTHER PTHR23105:SF5 21 229 1.2E-75 T 22-04-2016 RPIC12D_RS14860 4a18f62ede58bef4e125c27b88dfcf98 231 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 5.9E-51 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RPIC12D_RS14860 4a18f62ede58bef4e125c27b88dfcf98 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 6.9E-104 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RPIC12D_RS14860 4a18f62ede58bef4e125c27b88dfcf98 231 Gene3D G3DSA:3.30.190.20 161 225 6.1E-45 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 RPIC12D_RS14860 4a18f62ede58bef4e125c27b88dfcf98 231 Gene3D G3DSA:3.30.190.20 16 68 6.1E-45 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 RPIC12D_RS14860 4a18f62ede58bef4e125c27b88dfcf98 231 SUPERFAMILY SSF56808 7 225 1.26E-80 T 22-04-2016 IPR023674 Ribosomal protein L1-like RPIC12D_RS14860 4a18f62ede58bef4e125c27b88dfcf98 231 PIRSF PIRSF002155 1 227 5.7E-77 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 RPIC12D_RS14860 4a18f62ede58bef4e125c27b88dfcf98 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.882 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RPIC12D_RS14860 4a18f62ede58bef4e125c27b88dfcf98 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site RPIC12D_RS03220 a3fe6dd20b9e0fddddf5391f50109ef0 240 SUPERFAMILY SSF52218 7 227 3.98E-63 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC12D_RS03220 a3fe6dd20b9e0fddddf5391f50109ef0 240 PANTHER PTHR30041 15 240 1.4E-123 T 22-04-2016 RPIC12D_RS03220 a3fe6dd20b9e0fddddf5391f50109ef0 240 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 8 226 2.1E-125 T 22-04-2016 IPR014063 Arsenate resistance ArsH RPIC12D_RS03220 a3fe6dd20b9e0fddddf5391f50109ef0 240 PANTHER PTHR30041:SF1 15 240 1.4E-123 T 22-04-2016 RPIC12D_RS03220 a3fe6dd20b9e0fddddf5391f50109ef0 240 Pfam PF03358 NADPH-dependent FMN reductase 35 177 1.2E-26 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RPIC12D_RS03220 a3fe6dd20b9e0fddddf5391f50109ef0 240 Gene3D G3DSA:3.40.50.360 5 229 1.7E-103 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC12D_RS14605 6dc3de0e35c18b0ddc96660a2a488762 233 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 202 1.3E-61 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 RPIC12D_RS14605 6dc3de0e35c18b0ddc96660a2a488762 233 Gene3D G3DSA:3.40.50.300 16 203 1.7E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14605 6dc3de0e35c18b0ddc96660a2a488762 233 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 207 25.736 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 RPIC12D_RS14605 6dc3de0e35c18b0ddc96660a2a488762 233 SUPERFAMILY SSF52540 11 206 3.21E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14605 6dc3de0e35c18b0ddc96660a2a488762 233 Pfam PF01926 50S ribosome-binding GTPase 26 150 6.2E-17 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS14605 6dc3de0e35c18b0ddc96660a2a488762 233 PANTHER PTHR11649 17 207 6.0E-39 T 22-04-2016 RPIC12D_RS07935 0808172e0ef00c2bda15e975056b80d1 403 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 398 7.0E-90 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RPIC12D_RS07935 0808172e0ef00c2bda15e975056b80d1 403 PIRSF PIRSF001434 2 400 3.4E-118 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RPIC12D_RS07935 0808172e0ef00c2bda15e975056b80d1 403 SUPERFAMILY SSF53383 36 398 9.08E-94 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS07935 0808172e0ef00c2bda15e975056b80d1 403 Gene3D G3DSA:3.90.1150.10 263 399 1.2E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS07935 0808172e0ef00c2bda15e975056b80d1 403 Gene3D G3DSA:3.40.640.10 13 260 1.2E-69 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS07935 0808172e0ef00c2bda15e975056b80d1 403 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 34 398 9.6E-122 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 RPIC12D_RS07935 0808172e0ef00c2bda15e975056b80d1 403 PANTHER PTHR11808 36 402 2.5E-131 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RPIC12D_RS07935 0808172e0ef00c2bda15e975056b80d1 403 PANTHER PTHR11808:SF45 36 402 2.5E-131 T 22-04-2016 RPIC12D_RS15005 3f29f0684b1845d68894ce02874289c3 537 Gene3D G3DSA:2.60.40.10 421 532 4.2E-34 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC12D_RS15005 3f29f0684b1845d68894ce02874289c3 537 PANTHER PTHR30504:SF3 21 532 1.0E-254 T 22-04-2016 RPIC12D_RS15005 3f29f0684b1845d68894ce02874289c3 537 SUPERFAMILY SSF74650 37 418 4.08E-150 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RPIC12D_RS15005 3f29f0684b1845d68894ce02874289c3 537 SUPERFAMILY SSF81296 420 532 3.92E-27 T 22-04-2016 IPR014756 Immunoglobulin E-set RPIC12D_RS15005 3f29f0684b1845d68894ce02874289c3 537 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 537 58.033 T 22-04-2016 IPR023724 Glucan biosynthesis, MdoD UniPathway: UPA00637 RPIC12D_RS15005 3f29f0684b1845d68894ce02874289c3 537 PANTHER PTHR30504 21 532 1.0E-254 T 22-04-2016 RPIC12D_RS15005 3f29f0684b1845d68894ce02874289c3 537 PIRSF PIRSF006281 5 533 5.2E-202 T 22-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 RPIC12D_RS15005 3f29f0684b1845d68894ce02874289c3 537 Gene3D G3DSA:2.70.98.10 36 420 8.0E-165 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 RPIC12D_RS15005 3f29f0684b1845d68894ce02874289c3 537 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 37 529 4.0E-196 T 22-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 RPIC12D_RS25315 35c8aedae7ea93a332388a5b61350791 253 Gene3D G3DSA:3.90.226.10 27 171 1.6E-23 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS25315 35c8aedae7ea93a332388a5b61350791 253 PANTHER PTHR11941 36 168 1.5E-13 T 22-04-2016 RPIC12D_RS25315 35c8aedae7ea93a332388a5b61350791 253 SUPERFAMILY SSF52096 26 247 9.74E-29 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS25315 35c8aedae7ea93a332388a5b61350791 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 38 169 2.4E-10 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC12D_RS03135 983911eb63934feb882057a2975801db 189 PANTHER PTHR11527 46 189 5.1E-40 T 22-04-2016 IPR031107 Small heat shock protein HSP20 RPIC12D_RS03135 983911eb63934feb882057a2975801db 189 SUPERFAMILY SSF49764 49 181 1.26E-39 T 22-04-2016 IPR008978 HSP20-like chaperone RPIC12D_RS03135 983911eb63934feb882057a2975801db 189 Pfam PF00011 Hsp20/alpha crystallin family 85 188 8.2E-28 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain RPIC12D_RS03135 983911eb63934feb882057a2975801db 189 Gene3D G3DSA:2.60.40.790 40 187 1.7E-45 T 22-04-2016 IPR008978 HSP20-like chaperone RPIC12D_RS06115 456d350a55e84dbc43de1a2376860598 149 Gene3D G3DSA:1.10.10.10 3 135 2.1E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06115 456d350a55e84dbc43de1a2376860598 149 SMART SM00347 22 122 3.6E-25 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS06115 456d350a55e84dbc43de1a2376860598 149 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site RPIC12D_RS06115 456d350a55e84dbc43de1a2376860598 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 5.7E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS06115 456d350a55e84dbc43de1a2376860598 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 5.7E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS06115 456d350a55e84dbc43de1a2376860598 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 5.7E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS06115 456d350a55e84dbc43de1a2376860598 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 46 62 5.7E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS06115 456d350a55e84dbc43de1a2376860598 149 PANTHER PTHR33164 3 146 1.6E-29 T 22-04-2016 RPIC12D_RS06115 456d350a55e84dbc43de1a2376860598 149 Pfam PF01047 MarR family 30 87 1.8E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS06115 456d350a55e84dbc43de1a2376860598 149 SUPERFAMILY SSF46785 3 135 2.43E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07720 33d278da818e8b150fac1fd54fa3f658 215 Gene3D G3DSA:3.90.226.10 25 213 1.4E-88 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS07720 33d278da818e8b150fac1fd54fa3f658 215 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 134 147 - T 22-04-2016 IPR033135 ClpP, histidine active site RPIC12D_RS07720 33d278da818e8b150fac1fd54fa3f658 215 PANTHER PTHR10381:SF22 25 215 2.0E-135 T 22-04-2016 RPIC12D_RS07720 33d278da818e8b150fac1fd54fa3f658 215 Pfam PF00574 Clp protease 35 214 5.7E-88 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RPIC12D_RS07720 33d278da818e8b150fac1fd54fa3f658 215 PRINTS PR00127 Clp protease catalytic subunit P signature 133 152 4.1E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIC12D_RS07720 33d278da818e8b150fac1fd54fa3f658 215 PRINTS PR00127 Clp protease catalytic subunit P signature 112 129 4.1E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIC12D_RS07720 33d278da818e8b150fac1fd54fa3f658 215 PRINTS PR00127 Clp protease catalytic subunit P signature 190 209 4.1E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIC12D_RS07720 33d278da818e8b150fac1fd54fa3f658 215 PRINTS PR00127 Clp protease catalytic subunit P signature 41 56 4.1E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIC12D_RS07720 33d278da818e8b150fac1fd54fa3f658 215 PRINTS PR00127 Clp protease catalytic subunit P signature 81 101 4.1E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIC12D_RS07720 33d278da818e8b150fac1fd54fa3f658 215 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 24 214 6.1E-106 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIC12D_RS07720 33d278da818e8b150fac1fd54fa3f658 215 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 112 123 - T 22-04-2016 IPR018215 ClpP, Ser active site RPIC12D_RS07720 33d278da818e8b150fac1fd54fa3f658 215 PANTHER PTHR10381 25 215 2.0E-135 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RPIC12D_RS07720 33d278da818e8b150fac1fd54fa3f658 215 SUPERFAMILY SSF52096 33 212 8.9E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS07720 33d278da818e8b150fac1fd54fa3f658 215 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 25 215 45.092 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIC12D_RS07065 4e1cddffe8191a7d5b2ab75e04f86573 513 Pfam PF00672 HAMP domain 192 259 2.9E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS07065 4e1cddffe8191a7d5b2ab75e04f86573 513 Gene3D G3DSA:1.10.287.950 278 483 7.1E-62 T 22-04-2016 RPIC12D_RS07065 4e1cddffe8191a7d5b2ab75e04f86573 513 SMART SM00283 264 511 2.3E-87 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS07065 4e1cddffe8191a7d5b2ab75e04f86573 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 362 389 7.0E-63 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS07065 4e1cddffe8191a7d5b2ab75e04f86573 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 420 7.0E-63 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS07065 4e1cddffe8191a7d5b2ab75e04f86573 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 439 468 7.0E-63 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS07065 4e1cddffe8191a7d5b2ab75e04f86573 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 204 7.0E-63 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS07065 4e1cddffe8191a7d5b2ab75e04f86573 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 7.0E-63 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS07065 4e1cddffe8191a7d5b2ab75e04f86573 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 285 314 7.0E-63 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS07065 4e1cddffe8191a7d5b2ab75e04f86573 513 SUPERFAMILY SSF58104 231 512 2.09E-74 T 22-04-2016 RPIC12D_RS07065 4e1cddffe8191a7d5b2ab75e04f86573 513 PANTHER PTHR32089 98 513 2.3E-154 T 22-04-2016 RPIC12D_RS07065 4e1cddffe8191a7d5b2ab75e04f86573 513 Gene3D G3DSA:1.20.120.30 53 140 1.7E-5 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS07065 4e1cddffe8191a7d5b2ab75e04f86573 513 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 510 1.4E-60 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS07065 4e1cddffe8191a7d5b2ab75e04f86573 513 SUPERFAMILY SSF47170 44 158 2.88E-10 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS07065 4e1cddffe8191a7d5b2ab75e04f86573 513 PANTHER PTHR32089:SF63 98 513 2.3E-154 T 22-04-2016 RPIC12D_RS07065 4e1cddffe8191a7d5b2ab75e04f86573 513 Pfam PF02203 Tar ligand binding domain homologue 1 171 2.5E-46 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS07065 4e1cddffe8191a7d5b2ab75e04f86573 513 SMART SM00304 211 263 5.4E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS13945 e5df1890b18fc2fc84d03936c4e47569 330 SUPERFAMILY SSF53850 6 135 3.02E-33 T 22-04-2016 RPIC12D_RS13945 e5df1890b18fc2fc84d03936c4e47569 330 SUPERFAMILY SSF53850 164 317 3.02E-33 T 22-04-2016 RPIC12D_RS13945 e5df1890b18fc2fc84d03936c4e47569 330 Gene3D G3DSA:3.40.190.10 87 189 2.0E-15 T 22-04-2016 RPIC12D_RS13945 e5df1890b18fc2fc84d03936c4e47569 330 Pfam PF09084 NMT1/THI5 like 86 142 1.7E-5 T 22-04-2016 IPR015168 SsuA/THI5-like RPIC12D_RS06945 3c7c592fb1c0aa865baacf5a8f2dfbe7 231 PANTHER PTHR33711 16 230 9.4E-66 T 22-04-2016 RPIC12D_RS06945 3c7c592fb1c0aa865baacf5a8f2dfbe7 231 Gene3D G3DSA:2.60.130.10 26 230 1.6E-64 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RPIC12D_RS06945 3c7c592fb1c0aa865baacf5a8f2dfbe7 231 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 30 231 9.2E-75 T 22-04-2016 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 RPIC12D_RS06945 3c7c592fb1c0aa865baacf5a8f2dfbe7 231 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 73 101 - T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RPIC12D_RS06945 3c7c592fb1c0aa865baacf5a8f2dfbe7 231 PANTHER PTHR33711:SF2 16 230 9.4E-66 T 22-04-2016 RPIC12D_RS06945 3c7c592fb1c0aa865baacf5a8f2dfbe7 231 Pfam PF00775 Dioxygenase 65 217 1.0E-18 T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RPIC12D_RS06945 3c7c592fb1c0aa865baacf5a8f2dfbe7 231 SUPERFAMILY SSF49482 26 230 5.76E-57 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 Gene3D G3DSA:3.40.1380.20 331 476 5.2E-38 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 PANTHER PTHR11817:SF17 1 477 1.6E-230 T 22-04-2016 RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 Pfam PF00224 Pyruvate kinase, barrel domain 3 342 1.1E-114 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 Gene3D G3DSA:3.20.20.60 168 330 6.1E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 Gene3D G3DSA:3.20.20.60 3 73 6.1E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 SUPERFAMILY SSF50800 71 164 5.06E-26 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 PRINTS PR01050 Pyruvate kinase family signature 60 76 3.1E-45 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 PRINTS PR01050 Pyruvate kinase family signature 248 272 3.1E-45 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 PRINTS PR01050 Pyruvate kinase family signature 317 333 3.1E-45 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 PRINTS PR01050 Pyruvate kinase family signature 273 297 3.1E-45 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 PRINTS PR01050 Pyruvate kinase family signature 185 199 3.1E-45 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 PRINTS PR01050 Pyruvate kinase family signature 298 316 3.1E-45 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 SUPERFAMILY SSF52935 327 477 1.83E-36 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 Gene3D G3DSA:2.40.33.10 74 167 8.3E-29 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 Pfam PF02887 Pyruvate kinase, alpha/beta domain 362 474 1.8E-27 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 PANTHER PTHR11817 1 477 1.6E-230 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 SUPERFAMILY SSF51621 166 343 5.89E-88 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 SUPERFAMILY SSF51621 2 76 5.89E-88 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS02390 c969b0a33a3d0c1dfb5645451540de11 479 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 476 3.3E-153 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS04985 eadc851e99941361bd6cc9e17d2c0ec7 147 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 15 141 26.272 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RPIC12D_RS04985 eadc851e99941361bd6cc9e17d2c0ec7 147 Gene3D G3DSA:3.90.470.20 14 140 1.0E-33 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RPIC12D_RS04985 eadc851e99941361bd6cc9e17d2c0ec7 147 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 13 140 4.1E-29 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RPIC12D_RS04985 eadc851e99941361bd6cc9e17d2c0ec7 147 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 14 139 2.8E-21 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RPIC12D_RS04985 eadc851e99941361bd6cc9e17d2c0ec7 147 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 20 108 1.0E-44 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RPIC12D_RS04985 eadc851e99941361bd6cc9e17d2c0ec7 147 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 16 136 4.9E-19 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RPIC12D_RS04985 eadc851e99941361bd6cc9e17d2c0ec7 147 SUPERFAMILY SSF56214 14 140 5.62E-28 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RPIC12D_RS01945 8ec18082621b8bd1dd2e97a1a011e463 357 Gene3D G3DSA:1.10.8.60 197 268 2.3E-33 T 22-04-2016 RPIC12D_RS01945 8ec18082621b8bd1dd2e97a1a011e463 357 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 271 345 8.0E-38 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RPIC12D_RS01945 8ec18082621b8bd1dd2e97a1a011e463 357 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 357 183.584 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RPIC12D_RS01945 8ec18082621b8bd1dd2e97a1a011e463 357 SMART SM00382 65 192 1.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS01945 8ec18082621b8bd1dd2e97a1a011e463 357 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 38 340 1.6E-148 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RPIC12D_RS01945 8ec18082621b8bd1dd2e97a1a011e463 357 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 23 249 2.6E-117 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 RPIC12D_RS01945 8ec18082621b8bd1dd2e97a1a011e463 357 PANTHER PTHR13779:SF25 15 345 1.3E-183 T 22-04-2016 RPIC12D_RS01945 8ec18082621b8bd1dd2e97a1a011e463 357 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 267 340 8.8E-34 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RPIC12D_RS01945 8ec18082621b8bd1dd2e97a1a011e463 357 Gene3D G3DSA:3.40.50.300 34 190 1.8E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01945 8ec18082621b8bd1dd2e97a1a011e463 357 PANTHER PTHR13779 15 345 1.3E-183 T 22-04-2016 RPIC12D_RS01945 8ec18082621b8bd1dd2e97a1a011e463 357 SUPERFAMILY SSF52540 34 265 3.32E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01945 8ec18082621b8bd1dd2e97a1a011e463 357 SUPERFAMILY SSF46785 270 344 2.24E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS01945 8ec18082621b8bd1dd2e97a1a011e463 357 Gene3D G3DSA:1.10.10.10 271 341 1.3E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16635 87c89502d3a5175dd45d74362b2c5e43 381 Pfam PF01266 FAD dependent oxidoreductase 8 343 3.1E-36 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIC12D_RS16635 87c89502d3a5175dd45d74362b2c5e43 381 Gene3D G3DSA:3.50.50.60 6 89 6.3E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS16635 87c89502d3a5175dd45d74362b2c5e43 381 Gene3D G3DSA:3.50.50.60 134 186 6.3E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS16635 87c89502d3a5175dd45d74362b2c5e43 381 SUPERFAMILY SSF51905 7 271 1.08E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS16635 87c89502d3a5175dd45d74362b2c5e43 381 Gene3D G3DSA:3.30.9.10 187 309 5.8E-16 T 22-04-2016 RPIC12D_RS07230 b22624d69b430ca8f1fef212ba262359 299 Pfam PF03466 LysR substrate binding domain 89 294 6.3E-38 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS07230 b22624d69b430ca8f1fef212ba262359 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.5E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07230 b22624d69b430ca8f1fef212ba262359 299 PANTHER PTHR30419 1 295 9.3E-85 T 22-04-2016 RPIC12D_RS07230 b22624d69b430ca8f1fef212ba262359 299 SUPERFAMILY SSF53850 89 296 4.94E-44 T 22-04-2016 RPIC12D_RS07230 b22624d69b430ca8f1fef212ba262359 299 Gene3D G3DSA:3.40.190.10 91 176 2.7E-19 T 22-04-2016 RPIC12D_RS07230 b22624d69b430ca8f1fef212ba262359 299 Gene3D G3DSA:3.40.190.10 177 264 6.0E-20 T 22-04-2016 RPIC12D_RS07230 b22624d69b430ca8f1fef212ba262359 299 PANTHER PTHR30419:SF2 1 295 9.3E-85 T 22-04-2016 RPIC12D_RS07230 b22624d69b430ca8f1fef212ba262359 299 Gene3D G3DSA:1.10.10.10 3 89 2.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07230 b22624d69b430ca8f1fef212ba262359 299 SUPERFAMILY SSF46785 1 112 4.79E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00245 910e7af614f9136f326b8c961c8d9267 408 Gene3D G3DSA:3.40.640.10 61 305 1.3E-78 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS00245 910e7af614f9136f326b8c961c8d9267 408 Pfam PF00202 Aminotransferase class-III 17 399 2.2E-108 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS00245 910e7af614f9136f326b8c961c8d9267 408 PANTHER PTHR11986:SF18 10 407 3.1E-187 T 22-04-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC12D_RS00245 910e7af614f9136f326b8c961c8d9267 408 SUPERFAMILY SSF53383 12 399 4.21E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS00245 910e7af614f9136f326b8c961c8d9267 408 PANTHER PTHR11986 10 407 3.1E-187 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS00245 910e7af614f9136f326b8c961c8d9267 408 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 225 262 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC12D_RS00245 910e7af614f9136f326b8c961c8d9267 408 Gene3D G3DSA:3.90.1150.10 13 60 5.9E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS00245 910e7af614f9136f326b8c961c8d9267 408 Gene3D G3DSA:3.90.1150.10 310 400 5.9E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS00245 910e7af614f9136f326b8c961c8d9267 408 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 11 399 3.2E-141 T 22-04-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC12D_RS13725 20ba50bba7f48b45782cd97cd8055016 571 PANTHER PTHR30505:SF0 13 542 2.2E-226 T 22-04-2016 RPIC12D_RS13725 20ba50bba7f48b45782cd97cd8055016 571 PANTHER PTHR30505 13 542 2.2E-226 T 22-04-2016 RPIC12D_RS13725 20ba50bba7f48b45782cd97cd8055016 571 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 226 564 2.0E-135 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 RPIC12D_RS13725 20ba50bba7f48b45782cd97cd8055016 571 SUPERFAMILY SSF52794 3 100 1.52E-10 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RPIC12D_RS13725 20ba50bba7f48b45782cd97cd8055016 571 Gene3D G3DSA:3.40.50.2300 3 100 6.8E-7 T 22-04-2016 RPIC12D_RS13725 20ba50bba7f48b45782cd97cd8055016 571 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 114 196 1.2E-33 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 RPIC12D_RS13725 20ba50bba7f48b45782cd97cd8055016 571 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 115 203 6.5E-18 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RPIC12D_RS13725 20ba50bba7f48b45782cd97cd8055016 571 Gene3D G3DSA:3.40.50.2300 109 210 1.4E-40 T 22-04-2016 RPIC12D_RS13725 20ba50bba7f48b45782cd97cd8055016 571 SUPERFAMILY SSF52794 112 211 3.14E-36 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RPIC12D_RS04295 34df8f0bc171f8725e825163b83211ac 349 SMART SM00382 31 228 2.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS04295 34df8f0bc171f8725e825163b83211ac 349 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS04295 34df8f0bc171f8725e825163b83211ac 349 PANTHER PTHR24220 3 346 6.0E-144 T 22-04-2016 RPIC12D_RS04295 34df8f0bc171f8725e825163b83211ac 349 PANTHER PTHR24220:SF455 3 346 6.0E-144 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 RPIC12D_RS04295 34df8f0bc171f8725e825163b83211ac 349 Gene3D G3DSA:3.40.50.300 1 237 3.2E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04295 34df8f0bc171f8725e825163b83211ac 349 Pfam PF09383 NIL domain 273 344 2.1E-23 T 22-04-2016 IPR018449 NIL domain RPIC12D_RS04295 34df8f0bc171f8725e825163b83211ac 349 Gene3D G3DSA:3.30.70.260 238 348 3.2E-32 T 22-04-2016 RPIC12D_RS04295 34df8f0bc171f8725e825163b83211ac 349 SUPERFAMILY SSF55021 257 348 6.07E-24 T 22-04-2016 RPIC12D_RS04295 34df8f0bc171f8725e825163b83211ac 349 SMART SM00930 270 345 2.5E-29 T 22-04-2016 IPR018449 NIL domain RPIC12D_RS04295 34df8f0bc171f8725e825163b83211ac 349 Pfam PF00005 ABC transporter 22 170 7.1E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS04295 34df8f0bc171f8725e825163b83211ac 349 SUPERFAMILY SSF52540 1 241 8.35E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05650 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 2.4E-16 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RPIC12D_RS05650 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 PANTHER PTHR15184 54 141 4.9E-184 T 22-04-2016 RPIC12D_RS05650 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 PANTHER PTHR15184 160 418 4.9E-184 T 22-04-2016 RPIC12D_RS05650 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 SUPERFAMILY SSF50249 49 125 5.43E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS05650 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 SMART SM00382 170 349 6.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS05650 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 Gene3D G3DSA:1.10.720.10 1 47 1.1E-20 T 22-04-2016 RPIC12D_RS05650 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 Gene3D G3DSA:3.40.50.300 130 418 9.1E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05650 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 1.6E-30 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 RPIC12D_RS05650 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 SMART SM00959 5 47 9.1E-18 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RPIC12D_RS05650 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 SMART SM00357 52 118 1.3E-17 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 RPIC12D_RS05650 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 9.8E-22 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS05650 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.0E-209 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RPIC12D_RS05650 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 Gene3D G3DSA:2.40.50.140 49 117 6.5E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS05650 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 SUPERFAMILY SSF68912 1 46 1.22E-11 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RPIC12D_RS05650 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 242.651 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RPIC12D_RS05650 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 PANTHER PTHR15184:SF34 54 141 4.9E-184 T 22-04-2016 RPIC12D_RS05650 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 PANTHER PTHR15184:SF34 160 418 4.9E-184 T 22-04-2016 RPIC12D_RS05650 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 SUPERFAMILY SSF52540 90 371 9.77E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06750 01bc0d18721c381bd93ebf52cc77525f 236 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 4 235 6.3E-102 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RPIC12D_RS06750 01bc0d18721c381bd93ebf52cc77525f 236 PANTHER PTHR21499 2 234 8.7E-112 T 22-04-2016 RPIC12D_RS06750 01bc0d18721c381bd93ebf52cc77525f 236 PANTHER PTHR21499:SF23 2 234 8.7E-112 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RPIC12D_RS06750 01bc0d18721c381bd93ebf52cc77525f 236 PIRSF PIRSF005650 1 236 3.9E-93 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RPIC12D_RS06750 01bc0d18721c381bd93ebf52cc77525f 236 Pfam PF00696 Amino acid kinase family 5 214 2.5E-29 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC12D_RS06750 01bc0d18721c381bd93ebf52cc77525f 236 SUPERFAMILY SSF53633 2 235 8.77E-72 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC12D_RS06750 01bc0d18721c381bd93ebf52cc77525f 236 Hamap MF_01220_B Uridylate kinase [pyrH]. 2 235 44.538 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RPIC12D_RS06750 01bc0d18721c381bd93ebf52cc77525f 236 Gene3D G3DSA:3.40.1160.10 2 235 3.5E-85 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 PANTHER PTHR19370:SF68 33 339 5.3E-60 T 22-04-2016 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 Gene3D G3DSA:3.10.20.30 2 92 2.9E-27 T 22-04-2016 IPR012675 Beta-grasp domain RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 SUPERFAMILY SSF52343 207 340 2.49E-38 T 22-04-2016 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 81 7.9E-16 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 214 233 5.0E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 239 248 5.0E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 148 155 5.0E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 306 314 5.0E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 Gene3D G3DSA:3.40.50.80 207 341 1.4E-39 T 22-04-2016 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 1.2E-17 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 239 248 1.2E-17 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 198 207 1.2E-17 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 214 233 1.2E-17 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 306 314 1.2E-17 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 Gene3D G3DSA:2.40.30.10 101 205 9.9E-31 T 22-04-2016 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 Pfam PF00175 Oxidoreductase NAD-binding domain 215 319 2.8E-19 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 SUPERFAMILY SSF54292 2 90 4.06E-25 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 Pfam PF00970 Oxidoreductase FAD-binding domain 105 203 2.4E-15 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 SUPERFAMILY SSF63380 102 205 2.15E-22 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RPIC12D_RS11595 2059d17f810c5193cbbc6137336e37f0 349 PANTHER PTHR19370 33 339 5.3E-60 T 22-04-2016 RPIC12D_RS00210 a55a5825f6ec4ae9ec5ba140d916291b 302 PANTHER PTHR32322:SF2 1 300 9.5E-42 T 22-04-2016 RPIC12D_RS00210 a55a5825f6ec4ae9ec5ba140d916291b 302 SUPERFAMILY SSF103481 179 276 1.44E-11 T 22-04-2016 RPIC12D_RS00210 a55a5825f6ec4ae9ec5ba140d916291b 302 SUPERFAMILY SSF103481 49 138 1.83E-12 T 22-04-2016 RPIC12D_RS00210 a55a5825f6ec4ae9ec5ba140d916291b 302 PANTHER PTHR32322 1 300 9.5E-42 T 22-04-2016 RPIC12D_RS00210 a55a5825f6ec4ae9ec5ba140d916291b 302 Pfam PF00892 EamA-like transporter family 10 135 1.2E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS00210 a55a5825f6ec4ae9ec5ba140d916291b 302 Pfam PF00892 EamA-like transporter family 145 274 3.0E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS12330 f532b800d55d42f81a2fbfd09fb2d4e5 632 SUPERFAMILY SSF56752 352 621 3.27E-56 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RPIC12D_RS12330 f532b800d55d42f81a2fbfd09fb2d4e5 632 SUPERFAMILY SSF56322 37 405 4.06E-96 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RPIC12D_RS12330 f532b800d55d42f81a2fbfd09fb2d4e5 632 Gene3D G3DSA:3.30.470.10 407 478 1.3E-9 T 22-04-2016 RPIC12D_RS12330 f532b800d55d42f81a2fbfd09fb2d4e5 632 PANTHER PTHR11236:SF18 135 489 9.1E-136 T 22-04-2016 RPIC12D_RS12330 f532b800d55d42f81a2fbfd09fb2d4e5 632 Gene3D G3DSA:3.60.120.10 123 406 5.2E-116 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RPIC12D_RS12330 f532b800d55d42f81a2fbfd09fb2d4e5 632 PANTHER PTHR11236 135 489 9.1E-136 T 22-04-2016 RPIC12D_RS12330 f532b800d55d42f81a2fbfd09fb2d4e5 632 Gene3D G3DSA:3.20.10.10 492 620 9.0E-28 T 22-04-2016 RPIC12D_RS12330 f532b800d55d42f81a2fbfd09fb2d4e5 632 PRINTS PR00095 Anthranilate synthase component I signature 236 249 2.8E-10 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC12D_RS12330 f532b800d55d42f81a2fbfd09fb2d4e5 632 PRINTS PR00095 Anthranilate synthase component I signature 250 263 2.8E-10 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC12D_RS12330 f532b800d55d42f81a2fbfd09fb2d4e5 632 PRINTS PR00095 Anthranilate synthase component I signature 330 344 2.8E-10 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC12D_RS12330 f532b800d55d42f81a2fbfd09fb2d4e5 632 Pfam PF01063 Amino-transferase class IV 413 621 1.3E-43 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RPIC12D_RS12330 f532b800d55d42f81a2fbfd09fb2d4e5 632 Pfam PF00425 chorismate binding enzyme 134 400 2.7E-81 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal RPIC12D_RS04060 7b43717806504e5759457d89bc52b626 880 SUPERFAMILY SSF55681 2 256 3.73E-103 T 22-04-2016 RPIC12D_RS04060 7b43717806504e5759457d89bc52b626 880 SMART SM00863 659 701 4.9E-21 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RPIC12D_RS04060 7b43717806504e5759457d89bc52b626 880 Pfam PF02272 DHHA1 domain 806 872 5.2E-15 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 RPIC12D_RS04060 7b43717806504e5759457d89bc52b626 880 Gene3D G3DSA:3.30.930.10 1 252 1.8E-118 T 22-04-2016 RPIC12D_RS04060 7b43717806504e5759457d89bc52b626 880 SUPERFAMILY SSF50447 459 558 3.88E-18 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC12D_RS04060 7b43717806504e5759457d89bc52b626 880 SUPERFAMILY SSF55186 558 713 7.85E-49 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RPIC12D_RS04060 7b43717806504e5759457d89bc52b626 880 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 659 701 1.5E-18 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RPIC12D_RS04060 7b43717806504e5759457d89bc52b626 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 283 299 1.864158E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RPIC12D_RS04060 7b43717806504e5759457d89bc52b626 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 307 320 1.864158E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RPIC12D_RS04060 7b43717806504e5759457d89bc52b626 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 237 250 1.864158E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RPIC12D_RS04060 7b43717806504e5759457d89bc52b626 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 1.864158E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RPIC12D_RS04060 7b43717806504e5759457d89bc52b626 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 205 216 1.864158E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RPIC12D_RS04060 7b43717806504e5759457d89bc52b626 880 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 859 0.0 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RPIC12D_RS04060 7b43717806504e5759457d89bc52b626 880 Pfam PF01411 tRNA synthetases class II (A) 5 560 9.8E-214 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 RPIC12D_RS04060 7b43717806504e5759457d89bc52b626 880 PANTHER PTHR11777:SF9 1 880 0.0 T 22-04-2016 RPIC12D_RS04060 7b43717806504e5759457d89bc52b626 880 PANTHER PTHR11777 1 880 0.0 T 22-04-2016 RPIC12D_RS04060 7b43717806504e5759457d89bc52b626 880 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 880 201.222 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 RPIC12D_RS04060 7b43717806504e5759457d89bc52b626 880 SUPERFAMILY SSF101353 257 466 1.57E-61 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RPIC12D_RS09255 29fdb334a9ebdbd9d09d2d557f537bb3 381 Pfam PF00246 Zinc carboxypeptidase 129 349 2.4E-21 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 RPIC12D_RS09255 29fdb334a9ebdbd9d09d2d557f537bb3 381 PANTHER PTHR12756:SF18 8 313 1.0E-103 T 22-04-2016 RPIC12D_RS09255 29fdb334a9ebdbd9d09d2d557f537bb3 381 Gene3D G3DSA:3.40.630.10 102 357 8.6E-42 T 22-04-2016 RPIC12D_RS09255 29fdb334a9ebdbd9d09d2d557f537bb3 381 SUPERFAMILY SSF53187 107 378 1.57E-55 T 22-04-2016 RPIC12D_RS09255 29fdb334a9ebdbd9d09d2d557f537bb3 381 PANTHER PTHR12756 8 313 1.0E-103 T 22-04-2016 RPIC12D_RS09255 29fdb334a9ebdbd9d09d2d557f537bb3 381 SMART SM00631 110 361 2.2E-4 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 RPIC12D_RS04020 c6a6e5004a7b61f38ae2451cbd6f85b5 187 Gene3D G3DSA:2.40.128.110 22 186 1.4E-42 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC12D_RS04020 c6a6e5004a7b61f38ae2451cbd6f85b5 187 PANTHER PTHR34406 1 187 4.0E-32 T 22-04-2016 RPIC12D_RS04020 c6a6e5004a7b61f38ae2451cbd6f85b5 187 SUPERFAMILY SSF101874 20 187 3.66E-42 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC12D_RS04020 c6a6e5004a7b61f38ae2451cbd6f85b5 187 Pfam PF04264 YceI-like domain 24 184 1.5E-32 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC12D_RS04020 c6a6e5004a7b61f38ae2451cbd6f85b5 187 PANTHER PTHR34406:SF1 1 187 4.0E-32 T 22-04-2016 RPIC12D_RS04020 c6a6e5004a7b61f38ae2451cbd6f85b5 187 SMART SM00867 20 185 8.6E-44 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC12D_RS16015 e5d99f7fad25ffa05fb2ffe45ec788dd 303 SMART SM00470 34 128 1.0E-34 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC12D_RS16015 e5d99f7fad25ffa05fb2ffe45ec788dd 303 PANTHER PTHR33375:SF1 1 301 2.0E-91 T 22-04-2016 RPIC12D_RS16015 e5d99f7fad25ffa05fb2ffe45ec788dd 303 SUPERFAMILY SSF109709 121 227 2.01E-34 T 22-04-2016 RPIC12D_RS16015 e5d99f7fad25ffa05fb2ffe45ec788dd 303 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 32 212 2.3E-59 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 RPIC12D_RS16015 e5d99f7fad25ffa05fb2ffe45ec788dd 303 Pfam PF02195 ParB-like nuclease domain 36 128 1.7E-26 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC12D_RS16015 e5d99f7fad25ffa05fb2ffe45ec788dd 303 SUPERFAMILY SSF110849 35 130 1.39E-27 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC12D_RS16015 e5d99f7fad25ffa05fb2ffe45ec788dd 303 PANTHER PTHR33375 1 301 2.0E-91 T 22-04-2016 RPIC12D_RS16015 e5d99f7fad25ffa05fb2ffe45ec788dd 303 Gene3D G3DSA:3.90.1530.10 30 134 1.9E-37 T 22-04-2016 RPIC12D_RS09540 3c680d9f3e3104d7b0f993a169f5682e 334 Gene3D G3DSA:3.40.50.720 156 270 1.2E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS09540 3c680d9f3e3104d7b0f993a169f5682e 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 102 7.1E-7 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIC12D_RS09540 3c680d9f3e3104d7b0f993a169f5682e 334 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 332 7.8E-145 T 22-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- RPIC12D_RS09540 3c680d9f3e3104d7b0f993a169f5682e 334 SMART SM00829 10 331 6.5E-29 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIC12D_RS09540 3c680d9f3e3104d7b0f993a169f5682e 334 SUPERFAMILY SSF50129 1 141 1.22E-38 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS09540 3c680d9f3e3104d7b0f993a169f5682e 334 Pfam PF00107 Zinc-binding dehydrogenase 160 278 2.0E-29 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIC12D_RS09540 3c680d9f3e3104d7b0f993a169f5682e 334 Gene3D G3DSA:3.90.180.10 1 155 1.0E-40 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS09540 3c680d9f3e3104d7b0f993a169f5682e 334 SUPERFAMILY SSF51735 115 296 8.46E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS09540 3c680d9f3e3104d7b0f993a169f5682e 334 PANTHER PTHR11695:SF610 15 331 1.4E-127 T 22-04-2016 RPIC12D_RS09540 3c680d9f3e3104d7b0f993a169f5682e 334 PANTHER PTHR11695 15 331 1.4E-127 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RPIC12D_RS17340 da9680b5d43138460ca7b58aec945ca1 145 PANTHER PTHR33383 1 97 1.3E-33 T 22-04-2016 RPIC12D_RS17340 da9680b5d43138460ca7b58aec945ca1 145 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 17 62 6.0E-19 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RPIC12D_RS17340 da9680b5d43138460ca7b58aec945ca1 145 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 71 3.2E-24 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RPIC12D_RS17340 da9680b5d43138460ca7b58aec945ca1 145 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 22.592 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RPIC12D_RS17340 da9680b5d43138460ca7b58aec945ca1 145 SMART SM01234 1 68 5.7E-35 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RPIC12D_RS17340 da9680b5d43138460ca7b58aec945ca1 145 Pfam PF01809 Haemolytic domain 3 68 2.7E-24 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor RPIC12D_RS16975 d8220e23e4afd3e375c8d15360154534 443 PANTHER PTHR11262:SF3 3 106 5.4E-200 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RPIC12D_RS16975 d8220e23e4afd3e375c8d15360154534 443 PANTHER PTHR11262:SF3 218 443 5.4E-200 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RPIC12D_RS16975 d8220e23e4afd3e375c8d15360154534 443 SMART SM01086 335 434 1.6E-17 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RPIC12D_RS16975 d8220e23e4afd3e375c8d15360154534 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 187 329 7.3E-41 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS16975 d8220e23e4afd3e375c8d15360154534 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 5 443 1.8E-205 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RPIC12D_RS16975 d8220e23e4afd3e375c8d15360154534 443 SUPERFAMILY SSF52540 4 438 1.74E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16975 d8220e23e4afd3e375c8d15360154534 443 Gene3D G3DSA:1.10.8.10 112 177 5.6E-34 T 22-04-2016 RPIC12D_RS16975 d8220e23e4afd3e375c8d15360154534 443 Gene3D G3DSA:1.10.8.10 213 243 5.6E-34 T 22-04-2016 RPIC12D_RS16975 d8220e23e4afd3e375c8d15360154534 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 102 2.2E-6 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS16975 d8220e23e4afd3e375c8d15360154534 443 Gene3D G3DSA:1.10.8.60 334 443 3.8E-33 T 22-04-2016 RPIC12D_RS16975 d8220e23e4afd3e375c8d15360154534 443 SMART SM00382 50 332 5.6E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS16975 d8220e23e4afd3e375c8d15360154534 443 PANTHER PTHR11262 3 106 5.4E-200 T 22-04-2016 RPIC12D_RS16975 d8220e23e4afd3e375c8d15360154534 443 PANTHER PTHR11262 218 443 5.4E-200 T 22-04-2016 RPIC12D_RS16975 d8220e23e4afd3e375c8d15360154534 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 2 443 43.816 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RPIC12D_RS16975 d8220e23e4afd3e375c8d15360154534 443 Gene3D G3DSA:3.40.50.300 5 111 7.4E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16975 d8220e23e4afd3e375c8d15360154534 443 Gene3D G3DSA:3.40.50.300 245 331 7.4E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13235 1aa0f1f0a8cfc796e0a047a37b54180b 679 PANTHER PTHR24423 404 635 6.6E-47 T 22-04-2016 RPIC12D_RS13235 1aa0f1f0a8cfc796e0a047a37b54180b 679 PANTHER PTHR24423 214 301 6.6E-47 T 22-04-2016 RPIC12D_RS13235 1aa0f1f0a8cfc796e0a047a37b54180b 679 PANTHER PTHR24423 26 50 6.6E-47 T 22-04-2016 RPIC12D_RS13235 1aa0f1f0a8cfc796e0a047a37b54180b 679 PANTHER PTHR24423 343 380 6.6E-47 T 22-04-2016 RPIC12D_RS13235 1aa0f1f0a8cfc796e0a047a37b54180b 679 SUPERFAMILY SSF55785 219 299 2.27E-7 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS13235 1aa0f1f0a8cfc796e0a047a37b54180b 679 Pfam PF13188 PAS domain 224 296 1.5E-11 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS13235 1aa0f1f0a8cfc796e0a047a37b54180b 679 Pfam PF00512 His Kinase A (phospho-acceptor) domain 420 494 4.5E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS13235 1aa0f1f0a8cfc796e0a047a37b54180b 679 SMART SM00091 228 296 4.7E-4 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS13235 1aa0f1f0a8cfc796e0a047a37b54180b 679 SUPERFAMILY SSF47384 410 497 2.16E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS13235 1aa0f1f0a8cfc796e0a047a37b54180b 679 SUPERFAMILY SSF55874 499 636 1.7E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS13235 1aa0f1f0a8cfc796e0a047a37b54180b 679 Gene3D G3DSA:3.30.450.20 219 300 9.9E-8 T 22-04-2016 RPIC12D_RS13235 1aa0f1f0a8cfc796e0a047a37b54180b 679 SMART SM00387 546 674 6.7E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS13235 1aa0f1f0a8cfc796e0a047a37b54180b 679 SMART SM00388 420 497 4.9E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS13235 1aa0f1f0a8cfc796e0a047a37b54180b 679 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 547 636 6.7E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS13235 1aa0f1f0a8cfc796e0a047a37b54180b 679 Gene3D G3DSA:3.30.565.10 498 636 2.8E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS13235 1aa0f1f0a8cfc796e0a047a37b54180b 679 Gene3D G3DSA:1.10.287.130 413 493 6.6E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS06745 09b0a12bf494f2af66bd3ed377d37d94 296 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 RPIC12D_RS06745 09b0a12bf494f2af66bd3ed377d37d94 296 Pfam PF00889 Elongation factor TS 71 272 1.2E-66 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RPIC12D_RS06745 09b0a12bf494f2af66bd3ed377d37d94 296 Hamap MF_00050 Elongation factor Ts [tsf]. 1 289 77.849 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RPIC12D_RS06745 09b0a12bf494f2af66bd3ed377d37d94 296 Gene3D G3DSA:3.30.479.20 153 187 2.4E-23 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RPIC12D_RS06745 09b0a12bf494f2af66bd3ed377d37d94 296 Gene3D G3DSA:3.30.479.20 236 271 2.4E-23 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RPIC12D_RS06745 09b0a12bf494f2af66bd3ed377d37d94 296 Gene3D G3DSA:3.30.479.20 57 149 6.0E-19 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RPIC12D_RS06745 09b0a12bf494f2af66bd3ed377d37d94 296 Gene3D G3DSA:1.10.8.10 3 55 4.1E-21 T 22-04-2016 RPIC12D_RS06745 09b0a12bf494f2af66bd3ed377d37d94 296 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 289 3.0E-88 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RPIC12D_RS06745 09b0a12bf494f2af66bd3ed377d37d94 296 SUPERFAMILY SSF46934 3 56 3.27E-13 T 22-04-2016 IPR009060 UBA-like GO:0005515 RPIC12D_RS06745 09b0a12bf494f2af66bd3ed377d37d94 296 SUPERFAMILY SSF54713 56 149 2.83E-24 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RPIC12D_RS06745 09b0a12bf494f2af66bd3ed377d37d94 296 SUPERFAMILY SSF54713 153 289 1.55E-47 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RPIC12D_RS06745 09b0a12bf494f2af66bd3ed377d37d94 296 PANTHER PTHR11741 1 292 2.2E-115 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RPIC12D_RS06745 09b0a12bf494f2af66bd3ed377d37d94 296 Gene3D G3DSA:1.10.286.20 192 235 6.2E-20 T 22-04-2016 RPIC12D_RS04075 cc5b5a850809bc4436c83f88ac51360e 702 Gene3D G3DSA:2.170.130.10 36 179 9.7E-30 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS04075 cc5b5a850809bc4436c83f88ac51360e 702 Gene3D G3DSA:2.40.170.20 185 700 2.4E-100 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS04075 cc5b5a850809bc4436c83f88ac51360e 702 PANTHER PTHR32552 13 46 3.0E-70 T 22-04-2016 RPIC12D_RS04075 cc5b5a850809bc4436c83f88ac51360e 702 PANTHER PTHR32552 62 702 3.0E-70 T 22-04-2016 RPIC12D_RS04075 cc5b5a850809bc4436c83f88ac51360e 702 Pfam PF00593 TonB dependent receptor 472 700 1.3E-22 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS04075 cc5b5a850809bc4436c83f88ac51360e 702 PANTHER PTHR32552:SF10 13 46 3.0E-70 T 22-04-2016 RPIC12D_RS04075 cc5b5a850809bc4436c83f88ac51360e 702 PANTHER PTHR32552:SF10 62 702 3.0E-70 T 22-04-2016 RPIC12D_RS04075 cc5b5a850809bc4436c83f88ac51360e 702 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 169 4.2E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS04075 cc5b5a850809bc4436c83f88ac51360e 702 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 71 699 1.7E-95 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RPIC12D_RS04075 cc5b5a850809bc4436c83f88ac51360e 702 SUPERFAMILY SSF56935 33 700 3.8E-106 T 22-04-2016 RPIC12D_RS10870 4a648bffb929b3fa32f009bf6be6b905 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10870 4a648bffb929b3fa32f009bf6be6b905 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10870 4a648bffb929b3fa32f009bf6be6b905 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10870 4a648bffb929b3fa32f009bf6be6b905 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 249 1.5E-65 T 22-04-2016 RPIC12D_RS10870 4a648bffb929b3fa32f009bf6be6b905 252 SUPERFAMILY SSF51735 5 251 8.63E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS10870 4a648bffb929b3fa32f009bf6be6b905 252 Gene3D G3DSA:3.40.50.720 1 251 3.2E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS10870 4a648bffb929b3fa32f009bf6be6b905 252 PANTHER PTHR24321:SF6 1 252 1.0E-52 T 22-04-2016 RPIC12D_RS10870 4a648bffb929b3fa32f009bf6be6b905 252 PANTHER PTHR24321 1 252 1.0E-52 T 22-04-2016 RPIC12D_RS10870 4a648bffb929b3fa32f009bf6be6b905 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.0E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10870 4a648bffb929b3fa32f009bf6be6b905 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.0E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10870 4a648bffb929b3fa32f009bf6be6b905 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.0E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10870 4a648bffb929b3fa32f009bf6be6b905 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 5.0E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10870 4a648bffb929b3fa32f009bf6be6b905 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.0E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10870 4a648bffb929b3fa32f009bf6be6b905 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.0E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS16965 fb67602d809d5b3f21454e8a1e94ee83 533 PANTHER PTHR30290 303 516 4.6E-123 T 22-04-2016 RPIC12D_RS16965 fb67602d809d5b3f21454e8a1e94ee83 533 PANTHER PTHR30290 1 286 4.6E-123 T 22-04-2016 RPIC12D_RS16965 fb67602d809d5b3f21454e8a1e94ee83 533 PIRSF PIRSF002741 2 531 2.8E-94 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RPIC12D_RS16965 fb67602d809d5b3f21454e8a1e94ee83 533 SUPERFAMILY SSF53850 32 516 6.7E-127 T 22-04-2016 RPIC12D_RS16965 fb67602d809d5b3f21454e8a1e94ee83 533 Gene3D G3DSA:3.90.76.10 46 195 4.2E-37 T 22-04-2016 RPIC12D_RS16965 fb67602d809d5b3f21454e8a1e94ee83 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 447 2.0E-84 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RPIC12D_RS16965 fb67602d809d5b3f21454e8a1e94ee83 533 Gene3D G3DSA:3.40.190.10 196 312 3.6E-35 T 22-04-2016 RPIC12D_RS16965 fb67602d809d5b3f21454e8a1e94ee83 533 Gene3D G3DSA:3.10.105.10 313 505 3.4E-55 T 22-04-2016 RPIC12D_RS00535 e3f3c68091dd829a33ddb33477fbbe66 759 Pfam PF00593 TonB dependent receptor 509 757 8.6E-31 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS00535 e3f3c68091dd829a33ddb33477fbbe66 759 SUPERFAMILY SSF56935 32 759 8.11E-121 T 22-04-2016 RPIC12D_RS00535 e3f3c68091dd829a33ddb33477fbbe66 759 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 169 2.2E-17 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS00535 e3f3c68091dd829a33ddb33477fbbe66 759 PANTHER PTHR32552 22 759 2.9E-220 T 22-04-2016 RPIC12D_RS00535 e3f3c68091dd829a33ddb33477fbbe66 759 PANTHER PTHR32552:SF8 22 759 2.9E-220 T 22-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 RPIC12D_RS00535 e3f3c68091dd829a33ddb33477fbbe66 759 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 756 1.5E-78 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RPIC12D_RS00535 e3f3c68091dd829a33ddb33477fbbe66 759 Gene3D G3DSA:2.170.130.10 39 178 5.7E-31 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS00535 e3f3c68091dd829a33ddb33477fbbe66 759 Gene3D G3DSA:2.40.170.20 183 759 2.6E-147 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS12875 3387f7dba0012d681d04740aea621e15 358 Gene3D G3DSA:1.10.8.60 151 234 1.9E-33 T 22-04-2016 RPIC12D_RS12875 3387f7dba0012d681d04740aea621e15 358 SUPERFAMILY SSF48019 224 351 3.4E-28 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RPIC12D_RS12875 3387f7dba0012d681d04740aea621e15 358 Gene3D G3DSA:3.40.50.300 1 146 2.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12875 3387f7dba0012d681d04740aea621e15 358 Pfam PF06144 DNA polymerase III, delta subunit 24 201 1.6E-18 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 RPIC12D_RS12875 3387f7dba0012d681d04740aea621e15 358 PANTHER PTHR34388 2 350 1.3E-55 T 22-04-2016 RPIC12D_RS12875 3387f7dba0012d681d04740aea621e15 358 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 20 349 3.5E-81 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 RPIC12D_RS12875 3387f7dba0012d681d04740aea621e15 358 Gene3D G3DSA:1.20.272.20 235 352 5.1E-40 T 22-04-2016 RPIC12D_RS12875 3387f7dba0012d681d04740aea621e15 358 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 227 325 1.5E-9 T 22-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS12875 3387f7dba0012d681d04740aea621e15 358 SUPERFAMILY SSF52540 11 222 2.18E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09820 819d0dffa88bb42807c0edb0bac8bac3 277 PANTHER PTHR22911 6 270 7.2E-59 T 22-04-2016 RPIC12D_RS09820 819d0dffa88bb42807c0edb0bac8bac3 277 SUPERFAMILY SSF103481 38 134 6.28E-11 T 22-04-2016 RPIC12D_RS09820 819d0dffa88bb42807c0edb0bac8bac3 277 Pfam PF00892 EamA-like transporter family 142 273 1.8E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS09820 819d0dffa88bb42807c0edb0bac8bac3 277 SUPERFAMILY SSF103481 178 274 2.62E-10 T 22-04-2016 RPIC12D_RS09820 819d0dffa88bb42807c0edb0bac8bac3 277 PANTHER PTHR22911:SF61 6 270 7.2E-59 T 22-04-2016 RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 PANTHER PTHR22924:SF20 19 278 2.4E-52 T 22-04-2016 RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 Gene3D G3DSA:2.40.30.10 5 104 2.6E-30 T 22-04-2016 RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 SUPERFAMILY SSF54292 214 318 1.7E-23 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 33 43 1.4E-45 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 43 55 1.4E-45 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 194 202 1.4E-45 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 141 150 1.4E-45 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 55 69 1.4E-45 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 93 107 1.4E-45 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 115 134 1.4E-45 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 PRINTS PR00409 Phthalate dioxygenase reductase family signature 79 93 1.4E-45 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 245 311 3.5E-8 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 SUPERFAMILY SSF63380 4 103 3.59E-27 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 Gene3D G3DSA:3.10.20.30 220 318 6.7E-24 T 22-04-2016 IPR012675 Beta-grasp domain RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 Pfam PF00970 Oxidoreductase FAD-binding domain 11 105 1.7E-5 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 271 279 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 Gene3D G3DSA:3.40.50.80 105 219 9.0E-30 T 22-04-2016 RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 PANTHER PTHR22924 19 278 2.4E-52 T 22-04-2016 RPIC12D_RS13955 be6bbbef6efbb78c24c23fb11d342349 320 SUPERFAMILY SSF52343 104 222 9.69E-30 T 22-04-2016 RPIC12D_RS05315 220aa84464bd47dde6171fdd762b6a3f 494 PIRSF PIRSF005522 2 494 2.3E-239 T 22-04-2016 IPR016450 Uncharacterised conserved protein UCP005522 RPIC12D_RS05315 220aa84464bd47dde6171fdd762b6a3f 494 PANTHER PTHR34595 31 494 1.1E-298 T 22-04-2016 RPIC12D_RS05315 220aa84464bd47dde6171fdd762b6a3f 494 SUPERFAMILY SSF56059 33 233 6.57E-68 T 22-04-2016 RPIC12D_RS05315 220aa84464bd47dde6171fdd762b6a3f 494 SUPERFAMILY SSF56059 340 485 6.57E-68 T 22-04-2016 RPIC12D_RS05315 220aa84464bd47dde6171fdd762b6a3f 494 Pfam PF14403 Circularly permuted ATP-grasp type 2 95 470 2.8E-168 T 22-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 RPIC12D_RS05315 220aa84464bd47dde6171fdd762b6a3f 494 PANTHER PTHR34595:SF3 31 494 1.1E-298 T 22-04-2016 RPIC12D_RS04520 93fb82955272e6f703e75e91164f2322 460 Pfam PF00324 Amino acid permease 12 448 2.1E-103 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RPIC12D_RS04520 93fb82955272e6f703e75e91164f2322 460 ProSitePatterns PS00218 Amino acid permeases signature. 37 67 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RPIC12D_RS04520 93fb82955272e6f703e75e91164f2322 460 PIRSF PIRSF006060 1 456 6.3E-65 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC12D_RS04520 93fb82955272e6f703e75e91164f2322 460 PANTHER PTHR11785 4 444 5.0E-219 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC12D_RS04520 93fb82955272e6f703e75e91164f2322 460 PANTHER PTHR11785:SF351 4 444 5.0E-219 T 22-04-2016 RPIC12D_RS05440 0478a138b75bd3b454960ca38fb9cc08 261 Pfam PF12706 Beta-lactamase superfamily domain 28 211 1.3E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS05440 0478a138b75bd3b454960ca38fb9cc08 261 Gene3D G3DSA:3.60.15.10 182 234 3.1E-30 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS05440 0478a138b75bd3b454960ca38fb9cc08 261 Gene3D G3DSA:3.60.15.10 11 150 3.1E-30 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS05440 0478a138b75bd3b454960ca38fb9cc08 261 PANTHER PTHR13754:SF15 3 232 1.1E-54 T 22-04-2016 RPIC12D_RS05440 0478a138b75bd3b454960ca38fb9cc08 261 SMART SM00849 13 172 1.4E-5 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS05440 0478a138b75bd3b454960ca38fb9cc08 261 PANTHER PTHR13754 3 232 1.1E-54 T 22-04-2016 RPIC12D_RS05440 0478a138b75bd3b454960ca38fb9cc08 261 SUPERFAMILY SSF56281 5 237 1.06E-35 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 143 1.0E-41 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 101 110 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 Gene3D G3DSA:3.40.120.10 3 157 4.5E-46 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 239 254 6.3E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 100 114 6.3E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 179 198 6.3E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 SUPERFAMILY SSF55957 363 446 1.83E-22 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 259 2.9E-18 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 SUPERFAMILY SSF53738 2 186 3.73E-48 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 446 1.8E-15 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 PANTHER PTHR22573 2 447 2.2E-156 T 22-04-2016 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 SUPERFAMILY SSF53738 161 261 3.06E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 369 7.3E-32 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 446 5.1E-179 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 Gene3D G3DSA:3.40.120.10 181 255 7.5E-24 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 445 45.951 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 SUPERFAMILY SSF53738 263 370 1.45E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 PANTHER PTHR22573:SF15 2 447 2.2E-156 T 22-04-2016 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 Gene3D G3DSA:3.40.120.10 256 370 8.1E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS08660 110a0d77e2c83cbafcc1e0ebe6a6c3aa 447 Gene3D G3DSA:3.30.310.50 374 446 5.3E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS11810 0777e8cb6818217fe91f3569674e86b3 302 Gene3D G3DSA:3.40.190.10 91 178 5.5E-13 T 22-04-2016 RPIC12D_RS11810 0777e8cb6818217fe91f3569674e86b3 302 SUPERFAMILY SSF53850 89 293 1.28E-33 T 22-04-2016 RPIC12D_RS11810 0777e8cb6818217fe91f3569674e86b3 302 Gene3D G3DSA:1.10.10.10 1 83 2.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS11810 0777e8cb6818217fe91f3569674e86b3 302 Gene3D G3DSA:3.40.190.10 179 261 7.7E-14 T 22-04-2016 RPIC12D_RS11810 0777e8cb6818217fe91f3569674e86b3 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.5E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS11810 0777e8cb6818217fe91f3569674e86b3 302 PANTHER PTHR30537:SF5 1 293 9.5E-82 T 22-04-2016 RPIC12D_RS11810 0777e8cb6818217fe91f3569674e86b3 302 Pfam PF03466 LysR substrate binding domain 87 292 5.9E-36 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS11810 0777e8cb6818217fe91f3569674e86b3 302 SUPERFAMILY SSF46785 1 83 7.32E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS11810 0777e8cb6818217fe91f3569674e86b3 302 PANTHER PTHR30537 1 293 9.5E-82 T 22-04-2016 RPIC12D_RS16160 0b1373a60ee113eaf206eaa49d274bc0 254 Pfam PF07947 YhhN-like protein 64 240 3.1E-43 T 22-04-2016 IPR012506 YhhN-like GO:0016021 RPIC12D_RS16160 0b1373a60ee113eaf206eaa49d274bc0 254 PANTHER PTHR31885 70 253 8.2E-23 T 22-04-2016 RPIC12D_RS04610 5fca8f348075901b66a2376765471037 169 PANTHER PTHR36922:SF1 1 167 2.0E-74 T 22-04-2016 RPIC12D_RS04610 5fca8f348075901b66a2376765471037 169 Pfam PF09351 Domain of unknown function (DUF1993) 6 166 2.2E-63 T 22-04-2016 IPR018531 Domain of unknown function DUF1993 RPIC12D_RS04610 5fca8f348075901b66a2376765471037 169 PANTHER PTHR36922 1 167 2.0E-74 T 22-04-2016 RPIC12D_RS04610 5fca8f348075901b66a2376765471037 169 SUPERFAMILY SSF109854 5 168 6.41E-64 T 22-04-2016 RPIC12D_RS04610 5fca8f348075901b66a2376765471037 169 Gene3D G3DSA:1.20.120.450 2 167 1.8E-73 T 22-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase RPIC12D_RS16000 6a84dd7b673481b0851f1543f6f95631 88 Hamap MF_01396 ATP synthase subunit c [atpH]. 12 80 13.863 T 22-04-2016 RPIC12D_RS16000 6a84dd7b673481b0851f1543f6f95631 88 SUPERFAMILY SSF81333 8 82 1.96E-18 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RPIC12D_RS16000 6a84dd7b673481b0851f1543f6f95631 88 Gene3D G3DSA:1.20.20.10 7 82 1.2E-34 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 RPIC12D_RS16000 6a84dd7b673481b0851f1543f6f95631 88 Pfam PF00137 ATP synthase subunit C 14 76 3.4E-10 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RPIC12D_RS16000 6a84dd7b673481b0851f1543f6f95631 88 ProSitePatterns PS00605 ATP synthase c subunit signature. 43 64 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site RPIC12D_RS16000 6a84dd7b673481b0851f1543f6f95631 88 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 24 80 1.8E-20 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RPIC12D_RS10990 d2e9d3037f72fb3fad1c14dcccfe6e5c 186 Pfam PF11748 Protein of unknown function (DUF3306) 6 112 1.6E-36 T 22-04-2016 IPR021735 Protein of unknown function DUF3306 RPIC12D_RS08195 6734a33c10a5fcf3cf92ecebbe2995cd 493 PANTHER PTHR11699:SF213 9 491 7.2E-267 T 22-04-2016 RPIC12D_RS08195 6734a33c10a5fcf3cf92ecebbe2995cd 493 Gene3D G3DSA:3.40.605.10 8 261 4.2E-99 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS08195 6734a33c10a5fcf3cf92ecebbe2995cd 493 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS08195 6734a33c10a5fcf3cf92ecebbe2995cd 493 PANTHER PTHR11699 9 491 7.2E-267 T 22-04-2016 RPIC12D_RS08195 6734a33c10a5fcf3cf92ecebbe2995cd 493 Pfam PF00171 Aldehyde dehydrogenase family 20 479 5.0E-173 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS08195 6734a33c10a5fcf3cf92ecebbe2995cd 493 Gene3D G3DSA:3.40.309.10 262 454 6.2E-69 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RPIC12D_RS08195 6734a33c10a5fcf3cf92ecebbe2995cd 493 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 9 492 5.8E-223 T 22-04-2016 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 KEGG: 00010+1.2.1.-|KEGG: 00220+1.2.1.-|KEGG: 00260+1.2.1.-|KEGG: 00281+1.2.1.-|KEGG: 00300+1.2.1.-|KEGG: 00330+1.2.1.-|KEGG: 00380+1.2.1.-|KEGG: 00620+1.2.1.-|KEGG: 00624+1.2.1.-|KEGG: 00626+1.2.1.-|KEGG: 00640+1.2.1.-|KEGG: 00903+1.2.1.-|UniPathway: UPA00208 RPIC12D_RS08195 6734a33c10a5fcf3cf92ecebbe2995cd 493 SUPERFAMILY SSF53720 6 485 2.75E-167 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS08195 6734a33c10a5fcf3cf92ecebbe2995cd 493 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS27015 5c78bda0f182e8ceb6afeac357bbd5c7 149 SUPERFAMILY SSF53335 3 140 7.97E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS27015 5c78bda0f182e8ceb6afeac357bbd5c7 149 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 2 83 3.5E-19 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RPIC12D_RS27015 5c78bda0f182e8ceb6afeac357bbd5c7 149 PANTHER PTHR12049 10 135 1.5E-17 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RPIC12D_RS13865 02cb88316b4d1423cf1c6223d96dbaa3 248 Pfam PF10411 Disulfide bond isomerase protein N-terminus 39 91 1.9E-17 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RPIC12D_RS13865 02cb88316b4d1423cf1c6223d96dbaa3 248 PANTHER PTHR35272 6 240 1.3E-39 T 22-04-2016 RPIC12D_RS13865 02cb88316b4d1423cf1c6223d96dbaa3 248 Gene3D G3DSA:3.40.30.10 117 243 5.9E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS13865 02cb88316b4d1423cf1c6223d96dbaa3 248 SUPERFAMILY SSF54423 41 94 5.3E-12 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RPIC12D_RS13865 02cb88316b4d1423cf1c6223d96dbaa3 248 Pfam PF13098 Thioredoxin-like domain 120 240 7.9E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS13865 02cb88316b4d1423cf1c6223d96dbaa3 248 Gene3D G3DSA:3.10.450.70 35 96 1.3E-17 T 22-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal RPIC12D_RS13865 02cb88316b4d1423cf1c6223d96dbaa3 248 SUPERFAMILY SSF52833 101 242 1.01E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS03785 10dbe972ea3335abc56cdbd1496bd460 354 Gene3D G3DSA:1.10.260.40 12 64 7.4E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS03785 10dbe972ea3335abc56cdbd1496bd460 354 SUPERFAMILY SSF47413 12 69 4.64E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS03785 10dbe972ea3335abc56cdbd1496bd460 354 PANTHER PTHR30146 11 346 5.9E-82 T 22-04-2016 RPIC12D_RS03785 10dbe972ea3335abc56cdbd1496bd460 354 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 59 3.1E-14 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC12D_RS03785 10dbe972ea3335abc56cdbd1496bd460 354 Gene3D G3DSA:3.40.50.2300 183 326 1.8E-21 T 22-04-2016 RPIC12D_RS03785 10dbe972ea3335abc56cdbd1496bd460 354 PANTHER PTHR30146:SF27 11 346 5.9E-82 T 22-04-2016 RPIC12D_RS03785 10dbe972ea3335abc56cdbd1496bd460 354 SMART SM00354 11 82 2.5E-27 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC12D_RS03785 10dbe972ea3335abc56cdbd1496bd460 354 Gene3D G3DSA:3.40.50.2300 65 182 3.0E-38 T 22-04-2016 RPIC12D_RS03785 10dbe972ea3335abc56cdbd1496bd460 354 Pfam PF13377 Periplasmic binding protein-like domain 179 346 5.2E-19 T 22-04-2016 RPIC12D_RS03785 10dbe972ea3335abc56cdbd1496bd460 354 SUPERFAMILY SSF53822 69 330 7.46E-48 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS00235 ac03595d990e0aca9f54648b9adfc32a 132 Pfam PF02152 Dihydroneopterin aldolase 17 125 1.9E-23 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RPIC12D_RS00235 ac03595d990e0aca9f54648b9adfc32a 132 Gene3D G3DSA:3.30.1130.10 15 127 3.3E-30 T 22-04-2016 RPIC12D_RS00235 ac03595d990e0aca9f54648b9adfc32a 132 TIGRFAM TIGR00526 folB_dom: FolB domain 17 127 1.9E-12 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RPIC12D_RS00235 ac03595d990e0aca9f54648b9adfc32a 132 SUPERFAMILY SSF55620 13 127 4.73E-27 T 22-04-2016 RPIC12D_RS00235 ac03595d990e0aca9f54648b9adfc32a 132 SMART SM00905 16 127 2.9E-27 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RPIC12D_RS16435 c246910efb8816accf30c5c8eff09e0b 144 SUPERFAMILY SSF54637 5 140 5.09E-36 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS16435 c246910efb8816accf30c5c8eff09e0b 144 PANTHER PTHR12418:SF25 6 144 3.4E-31 T 22-04-2016 RPIC12D_RS16435 c246910efb8816accf30c5c8eff09e0b 144 Pfam PF03061 Thioesterase superfamily 56 132 8.4E-11 T 22-04-2016 IPR006683 Thioesterase domain RPIC12D_RS16435 c246910efb8816accf30c5c8eff09e0b 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 33 141 2.2E-18 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain RPIC12D_RS16435 c246910efb8816accf30c5c8eff09e0b 144 Gene3D G3DSA:3.10.129.10 5 144 9.5E-57 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS16435 c246910efb8816accf30c5c8eff09e0b 144 PANTHER PTHR12418 6 144 3.4E-31 T 22-04-2016 RPIC12D_RS15565 cedc905a35a91880247c7aff2560defb 186 Gene3D G3DSA:3.40.30.10 17 185 1.1E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS15565 cedc905a35a91880247c7aff2560defb 186 ProSitePatterns PS00194 Thioredoxin family active site. 74 92 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RPIC12D_RS15565 cedc905a35a91880247c7aff2560defb 186 PANTHER PTHR10681:SF104 45 164 3.2E-20 T 22-04-2016 RPIC12D_RS15565 cedc905a35a91880247c7aff2560defb 186 Pfam PF00578 AhpC/TSA family 46 159 2.2E-16 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS15565 cedc905a35a91880247c7aff2560defb 186 SUPERFAMILY SSF52833 16 169 8.5E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS15565 cedc905a35a91880247c7aff2560defb 186 PANTHER PTHR10681 45 164 3.2E-20 T 22-04-2016 RPIC12D_RS20535 3347e7dea37c2b350c25a0fa23da3935 129 Gene3D G3DSA:3.40.30.10 85 127 2.0E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS20535 3347e7dea37c2b350c25a0fa23da3935 129 Pfam PF13462 Thioredoxin 90 119 3.3E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS20535 3347e7dea37c2b350c25a0fa23da3935 129 SUPERFAMILY SSF52833 81 129 7.51E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS01690 f81eac2905549940f86cf297dfa69ceb 506 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RPIC12D_RS01690 f81eac2905549940f86cf297dfa69ceb 506 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 424 506 1.3E-25 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 RPIC12D_RS01690 f81eac2905549940f86cf297dfa69ceb 506 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 322 412 5.7E-28 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 RPIC12D_RS01690 f81eac2905549940f86cf297dfa69ceb 506 SUPERFAMILY SSF53686 3 353 1.17E-99 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC12D_RS01690 f81eac2905549940f86cf297dfa69ceb 506 PANTHER PTHR10314:SF30 1 362 1.2E-201 T 22-04-2016 RPIC12D_RS01690 f81eac2905549940f86cf297dfa69ceb 506 Gene3D G3DSA:3.40.1020.10 386 506 1.1E-47 T 22-04-2016 RPIC12D_RS01690 f81eac2905549940f86cf297dfa69ceb 506 PANTHER PTHR10314 1 362 1.2E-201 T 22-04-2016 RPIC12D_RS01690 f81eac2905549940f86cf297dfa69ceb 506 Gene3D G3DSA:3.40.50.1100 69 327 5.1E-84 T 22-04-2016 RPIC12D_RS01690 f81eac2905549940f86cf297dfa69ceb 506 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 4 506 2.1E-242 T 22-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 RPIC12D_RS01690 f81eac2905549940f86cf297dfa69ceb 506 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 309 1.2E-79 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC12D_RS01690 f81eac2905549940f86cf297dfa69ceb 506 SUPERFAMILY SSF55021 413 506 7.32E-28 T 22-04-2016 RPIC12D_RS01690 f81eac2905549940f86cf297dfa69ceb 506 SUPERFAMILY SSF55021 330 416 6.64E-25 T 22-04-2016 RPIC12D_RS15740 73e73e9388611fef1f2b6e7078a97437 116 Pfam PF03960 ArsC family 4 114 1.2E-14 T 22-04-2016 IPR006660 Arsenate reductase-like RPIC12D_RS15740 73e73e9388611fef1f2b6e7078a97437 116 Gene3D G3DSA:3.40.30.10 1 115 2.9E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS15740 73e73e9388611fef1f2b6e7078a97437 116 PANTHER PTHR30041:SF4 1 109 7.8E-33 T 22-04-2016 RPIC12D_RS15740 73e73e9388611fef1f2b6e7078a97437 116 SUPERFAMILY SSF52833 2 115 3.84E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS15740 73e73e9388611fef1f2b6e7078a97437 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 2 113 2.4E-31 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 RPIC12D_RS15740 73e73e9388611fef1f2b6e7078a97437 116 PANTHER PTHR30041 1 109 7.8E-33 T 22-04-2016 RPIC12D_RS15605 a240f2eb51384a8d6aa6626dcdffd05a 765 Pfam PF13166 AAA domain 228 692 2.5E-26 T 22-04-2016 IPR026866 P-loop containing protein CR006/PrrC RPIC12D_RS15605 a240f2eb51384a8d6aa6626dcdffd05a 765 Gene3D G3DSA:3.40.1140.10 540 610 1.0E-12 T 22-04-2016 RPIC12D_RS15605 a240f2eb51384a8d6aa6626dcdffd05a 765 Gene3D G3DSA:3.40.1140.10 5 107 1.0E-12 T 22-04-2016 RPIC12D_RS15605 a240f2eb51384a8d6aa6626dcdffd05a 765 SUPERFAMILY SSF52540 11 157 9.63E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15605 a240f2eb51384a8d6aa6626dcdffd05a 765 SUPERFAMILY SSF52540 424 610 9.63E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12665 667555a19a620ff8e26417dc26b0f8ba 201 SUPERFAMILY SSF46894 127 199 7.14E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS12665 667555a19a620ff8e26417dc26b0f8ba 201 SMART SM00448 6 120 4.5E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS12665 667555a19a620ff8e26417dc26b0f8ba 201 ProSitePatterns PS00622 LuxR-type HTH domain signature. 153 180 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS12665 667555a19a620ff8e26417dc26b0f8ba 201 Gene3D G3DSA:1.10.10.10 138 199 1.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12665 667555a19a620ff8e26417dc26b0f8ba 201 SUPERFAMILY SSF52172 6 135 1.25E-39 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS12665 667555a19a620ff8e26417dc26b0f8ba 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 193 4.0E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS12665 667555a19a620ff8e26417dc26b0f8ba 201 PANTHER PTHR26402 6 193 7.2E-59 T 22-04-2016 RPIC12D_RS12665 667555a19a620ff8e26417dc26b0f8ba 201 Gene3D G3DSA:3.40.50.2300 5 130 4.0E-38 T 22-04-2016 RPIC12D_RS12665 667555a19a620ff8e26417dc26b0f8ba 201 SMART SM00421 136 193 2.2E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS12665 667555a19a620ff8e26417dc26b0f8ba 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 4.2E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS12665 667555a19a620ff8e26417dc26b0f8ba 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 4.2E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS12665 667555a19a620ff8e26417dc26b0f8ba 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 4.2E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS12665 667555a19a620ff8e26417dc26b0f8ba 201 Pfam PF00072 Response regulator receiver domain 8 120 3.6E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS13640 024d6650bd306ac23793b8105647e45e 389 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 78 8.2E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC12D_RS13640 024d6650bd306ac23793b8105647e45e 389 ProSitePatterns PS01348 MraY family signature 2. 212 223 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC12D_RS13640 024d6650bd306ac23793b8105647e45e 389 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 40 389 1.9E-120 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC12D_RS13640 024d6650bd306ac23793b8105647e45e 389 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC12D_RS13640 024d6650bd306ac23793b8105647e45e 389 PANTHER PTHR22926 2 152 1.2E-159 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC12D_RS13640 024d6650bd306ac23793b8105647e45e 389 PANTHER PTHR22926 175 389 1.2E-159 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC12D_RS13640 024d6650bd306ac23793b8105647e45e 389 PANTHER PTHR22926:SF5 2 152 1.2E-159 T 22-04-2016 RPIC12D_RS13640 024d6650bd306ac23793b8105647e45e 389 PANTHER PTHR22926:SF5 175 389 1.2E-159 T 22-04-2016 RPIC12D_RS13640 024d6650bd306ac23793b8105647e45e 389 Pfam PF00953 Glycosyl transferase family 4 99 307 7.5E-35 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC12D_RS13640 024d6650bd306ac23793b8105647e45e 389 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 387 23.646 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC12D_RS02605 f2eb0adb8ac71bc8914da3ee6a5aa368 600 Gene3D G3DSA:1.10.287.950 365 569 5.1E-65 T 22-04-2016 RPIC12D_RS02605 f2eb0adb8ac71bc8914da3ee6a5aa368 600 PANTHER PTHR32089 89 600 6.5E-204 T 22-04-2016 RPIC12D_RS02605 f2eb0adb8ac71bc8914da3ee6a5aa368 600 SMART SM00283 350 597 1.2E-94 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS02605 f2eb0adb8ac71bc8914da3ee6a5aa368 600 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 402 596 5.3E-64 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS02605 f2eb0adb8ac71bc8914da3ee6a5aa368 600 SUPERFAMILY SSF103190 89 175 3.14E-13 T 22-04-2016 IPR029151 Periplasmic sensor domain-like RPIC12D_RS02605 f2eb0adb8ac71bc8914da3ee6a5aa368 600 SMART SM00304 295 349 2.4E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS02605 f2eb0adb8ac71bc8914da3ee6a5aa368 600 SUPERFAMILY SSF58104 317 598 7.46E-79 T 22-04-2016 RPIC12D_RS02605 f2eb0adb8ac71bc8914da3ee6a5aa368 600 PANTHER PTHR32089:SF63 89 600 6.5E-204 T 22-04-2016 RPIC12D_RS02605 f2eb0adb8ac71bc8914da3ee6a5aa368 600 Gene3D G3DSA:3.30.450.20 135 272 2.1E-27 T 22-04-2016 RPIC12D_RS02605 f2eb0adb8ac71bc8914da3ee6a5aa368 600 Pfam PF00672 HAMP domain 277 345 1.8E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS02605 f2eb0adb8ac71bc8914da3ee6a5aa368 600 Pfam PF02743 Cache domain 38 257 5.0E-25 T 22-04-2016 IPR033479 Double Cache domain 1 RPIC12D_RS02105 1415c5c4565491ce134552eb1d5d2a1f 270 SUPERFAMILY SSF55486 146 267 1.27E-38 T 22-04-2016 RPIC12D_RS02105 1415c5c4565491ce134552eb1d5d2a1f 270 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 231 241 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site RPIC12D_RS02105 1415c5c4565491ce134552eb1d5d2a1f 270 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 121 265 21.137 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RPIC12D_RS02105 1415c5c4565491ce134552eb1d5d2a1f 270 Pfam PF02130 Uncharacterized protein family UPF0054 144 260 7.5E-31 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RPIC12D_RS02105 1415c5c4565491ce134552eb1d5d2a1f 270 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 159 262 1.1E-32 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RPIC12D_RS02105 1415c5c4565491ce134552eb1d5d2a1f 270 Gene3D G3DSA:3.40.390.30 140 269 1.4E-42 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 RPIC12D_RS02105 1415c5c4565491ce134552eb1d5d2a1f 270 PANTHER PTHR22881 140 268 8.1E-40 T 22-04-2016 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 SUPERFAMILY SSF52335 944 1079 2.62E-38 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 SUPERFAMILY SSF52440 562 680 1.87E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 Pfam PF02142 MGS-like domain 965 1051 1.3E-20 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 PANTHER PTHR11405:SF5 1 1068 0.0 T 22-04-2016 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 341 1.1E-70 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 678 883 2.1E-36 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 Gene3D G3DSA:3.30.1490.20 692 749 2.1E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1061 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 SUPERFAMILY SSF52440 1 127 1.87E-51 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 Gene3D G3DSA:3.30.470.20 750 943 1.4E-80 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 Gene3D G3DSA:3.30.470.20 207 406 3.2E-76 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1072 13.21 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 429 549 1.3E-37 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 171 185 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 714 728 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 Gene3D G3DSA:1.10.1030.10 407 539 5.3E-49 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 SMART SM01096 426 549 1.3E-71 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 SMART SM00851 964 1051 4.3E-30 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 Gene3D G3DSA:3.30.1490.20 143 206 2.9E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 SUPERFAMILY SSF48108 403 554 4.05E-50 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 PANTHER PTHR11405 1 1068 0.0 T 22-04-2016 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 Gene3D G3DSA:3.40.50.20 3 108 4.8E-45 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1077 13.38 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 SUPERFAMILY SSF56059 678 942 2.65E-104 T 22-04-2016 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 SUPERFAMILY SSF56059 128 408 1.1E-106 T 22-04-2016 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 Gene3D G3DSA:3.40.50.1380 946 1080 1.2E-41 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 Gene3D G3DSA:3.40.50.20 540 667 4.3E-60 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 847 854 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 304 311 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 175 187 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 246 263 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 211 230 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 387 405 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS08695 d4225e3064c6f615cb805d63f9ec0a1a 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 304 333 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC12D_RS01720 3d64ac7319540515274f55db362df676 614 SUPERFAMILY SSF52540 391 590 3.04E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01720 3d64ac7319540515274f55db362df676 614 PANTHER PTHR11384 29 587 2.6E-199 T 22-04-2016 RPIC12D_RS01720 3d64ac7319540515274f55db362df676 614 Pfam PF06472 ABC transporter transmembrane region 2 29 316 4.3E-68 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC12D_RS01720 3d64ac7319540515274f55db362df676 614 Gene3D G3DSA:3.40.50.300 406 581 6.0E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01720 3d64ac7319540515274f55db362df676 614 SMART SM00382 420 593 3.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS01720 3d64ac7319540515274f55db362df676 614 ProSitePatterns PS00211 ABC transporters family signature. 518 532 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS01720 3d64ac7319540515274f55db362df676 614 Pfam PF00005 ABC transporter 412 546 2.1E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS01720 3d64ac7319540515274f55db362df676 614 SUPERFAMILY SSF90123 33 363 9.42E-26 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC12D_RS01720 3d64ac7319540515274f55db362df676 614 Gene3D G3DSA:1.20.1560.10 33 363 8.6E-17 T 22-04-2016 RPIC12D_RS01720 3d64ac7319540515274f55db362df676 614 PANTHER PTHR11384:SF3 29 587 2.6E-199 T 22-04-2016 RPIC12D_RS13075 853cc96465973540ec65a137a944ddf0 305 PANTHER PTHR21089:SF2 5 301 4.8E-122 T 22-04-2016 RPIC12D_RS13075 853cc96465973540ec65a137a944ddf0 305 SUPERFAMILY SSF53223 17 117 2.99E-28 T 22-04-2016 RPIC12D_RS13075 853cc96465973540ec65a137a944ddf0 305 Gene3D G3DSA:3.40.192.10 17 122 1.7E-34 T 22-04-2016 RPIC12D_RS13075 853cc96465973540ec65a137a944ddf0 305 PANTHER PTHR21089 5 301 4.8E-122 T 22-04-2016 RPIC12D_RS13075 853cc96465973540ec65a137a944ddf0 305 Gene3D G3DSA:3.40.50.720 123 292 3.2E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS13075 853cc96465973540ec65a137a944ddf0 305 SUPERFAMILY SSF51735 118 291 2.08E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS13075 853cc96465973540ec65a137a944ddf0 305 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 18 291 30.501 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS13075 853cc96465973540ec65a137a944ddf0 305 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 23 105 8.5E-21 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS13075 853cc96465973540ec65a137a944ddf0 305 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 21 293 3.2E-76 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS13075 853cc96465973540ec65a137a944ddf0 305 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 128 215 3.3E-9 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RPIC12D_RS10035 1e6eaa12fe2d477fd6ccd36ef2ef369e 302 PIRSF PIRSF000166 1 302 6.5E-117 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC12D_RS10035 1e6eaa12fe2d477fd6ccd36ef2ef369e 302 PRINTS PR00073 Coprogen oxidase signature 125 147 5.5E-67 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC12D_RS10035 1e6eaa12fe2d477fd6ccd36ef2ef369e 302 PRINTS PR00073 Coprogen oxidase signature 262 288 5.5E-67 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC12D_RS10035 1e6eaa12fe2d477fd6ccd36ef2ef369e 302 PRINTS PR00073 Coprogen oxidase signature 90 114 5.5E-67 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC12D_RS10035 1e6eaa12fe2d477fd6ccd36ef2ef369e 302 PRINTS PR00073 Coprogen oxidase signature 234 261 5.5E-67 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC12D_RS10035 1e6eaa12fe2d477fd6ccd36ef2ef369e 302 PRINTS PR00073 Coprogen oxidase signature 27 43 5.5E-67 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC12D_RS10035 1e6eaa12fe2d477fd6ccd36ef2ef369e 302 PRINTS PR00073 Coprogen oxidase signature 162 191 5.5E-67 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC12D_RS10035 1e6eaa12fe2d477fd6ccd36ef2ef369e 302 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 1 277 55.032 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC12D_RS10035 1e6eaa12fe2d477fd6ccd36ef2ef369e 302 Gene3D G3DSA:3.40.1500.10 3 302 2.6E-124 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC12D_RS10035 1e6eaa12fe2d477fd6ccd36ef2ef369e 302 SUPERFAMILY SSF102886 4 302 2.35E-129 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC12D_RS10035 1e6eaa12fe2d477fd6ccd36ef2ef369e 302 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 22-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC12D_RS10035 1e6eaa12fe2d477fd6ccd36ef2ef369e 302 Pfam PF01218 Coproporphyrinogen III oxidase 6 302 3.8E-122 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC12D_RS10035 1e6eaa12fe2d477fd6ccd36ef2ef369e 302 PANTHER PTHR10755 6 302 5.1E-160 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC12D_RS04785 4630026cd0f4379413317cbceb745bd4 514 SUPERFAMILY SSF55681 167 511 2.49E-117 T 22-04-2016 RPIC12D_RS04785 4630026cd0f4379413317cbceb745bd4 514 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 27 513 43.797 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 RPIC12D_RS04785 4630026cd0f4379413317cbceb745bd4 514 Gene3D G3DSA:3.30.930.10 165 509 1.2E-114 T 22-04-2016 RPIC12D_RS04785 4630026cd0f4379413317cbceb745bd4 514 PANTHER PTHR22594:SF4 4 514 3.4E-262 T 22-04-2016 RPIC12D_RS04785 4630026cd0f4379413317cbceb745bd4 514 Gene3D G3DSA:2.40.50.140 22 159 3.5E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04785 4630026cd0f4379413317cbceb745bd4 514 SUPERFAMILY SSF50249 19 159 4.16E-44 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04785 4630026cd0f4379413317cbceb745bd4 514 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 22 512 4.6E-199 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 RPIC12D_RS04785 4630026cd0f4379413317cbceb745bd4 514 Pfam PF00152 tRNA synthetases class II (D, K and N) 168 510 1.4E-83 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS04785 4630026cd0f4379413317cbceb745bd4 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 214 6.4E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RPIC12D_RS04785 4630026cd0f4379413317cbceb745bd4 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 220 236 6.4E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RPIC12D_RS04785 4630026cd0f4379413317cbceb745bd4 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 267 284 6.4E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RPIC12D_RS04785 4630026cd0f4379413317cbceb745bd4 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 249 262 6.4E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RPIC12D_RS04785 4630026cd0f4379413317cbceb745bd4 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 395 411 6.4E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RPIC12D_RS04785 4630026cd0f4379413317cbceb745bd4 514 PANTHER PTHR22594 4 514 3.4E-262 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS04785 4630026cd0f4379413317cbceb745bd4 514 Pfam PF01336 OB-fold nucleic acid binding domain 74 151 6.9E-14 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RPIC12D_RS13180 57927e0d3d872be33a46a0f7c5853af5 515 SMART SM00283 266 513 6.8E-91 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS13180 57927e0d3d872be33a46a0f7c5853af5 515 PANTHER PTHR32089:SF63 190 515 6.3E-140 T 22-04-2016 RPIC12D_RS13180 57927e0d3d872be33a46a0f7c5853af5 515 SMART SM01049 33 127 8.5E-34 T 22-04-2016 IPR033480 Single Cache domain 2 RPIC12D_RS13180 57927e0d3d872be33a46a0f7c5853af5 515 Pfam PF17200 Single Cache domain 2 37 185 1.7E-34 T 22-04-2016 IPR033480 Single Cache domain 2 RPIC12D_RS13180 57927e0d3d872be33a46a0f7c5853af5 515 Gene3D G3DSA:1.10.287.950 280 485 7.0E-65 T 22-04-2016 RPIC12D_RS13180 57927e0d3d872be33a46a0f7c5853af5 515 Gene3D G3DSA:3.30.450.20 22 180 1.3E-42 T 22-04-2016 RPIC12D_RS13180 57927e0d3d872be33a46a0f7c5853af5 515 SUPERFAMILY SSF58104 242 514 9.68E-71 T 22-04-2016 RPIC12D_RS13180 57927e0d3d872be33a46a0f7c5853af5 515 PANTHER PTHR32089 190 515 6.3E-140 T 22-04-2016 RPIC12D_RS13180 57927e0d3d872be33a46a0f7c5853af5 515 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 319 512 1.6E-61 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS04640 46238ceb323b2258db5738275b01fd63 293 Gene3D G3DSA:3.40.50.300 22 210 3.9E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04640 46238ceb323b2258db5738275b01fd63 293 PANTHER PTHR22908 16 246 9.6E-72 T 22-04-2016 RPIC12D_RS04640 46238ceb323b2258db5738275b01fd63 293 SUPERFAMILY SSF52540 20 256 2.57E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04640 46238ceb323b2258db5738275b01fd63 293 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 42 189 3.7E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS04640 46238ceb323b2258db5738275b01fd63 293 SMART SM00382 38 196 8.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS03380 22c2cc8d59a00a667e74f569ae859062 142 Pfam PF11990 Protein of unknown function (DUF3487) 14 131 4.5E-42 T 22-04-2016 IPR021877 Protein of unknown function DUF3487 RPIC12D_RS03380 22c2cc8d59a00a667e74f569ae859062 142 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 15 130 8.1E-41 T 22-04-2016 IPR021877 Protein of unknown function DUF3487 RPIC12D_RS08510 eacb8d55372c8a4692b53060245e975c 626 PANTHER PTHR35370:SF2 2 626 0.0 T 22-04-2016 RPIC12D_RS08510 eacb8d55372c8a4692b53060245e975c 626 PIRSF PIRSF028304 1 626 2.1E-167 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like RPIC12D_RS08510 eacb8d55372c8a4692b53060245e975c 626 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 624 6.8E-210 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like RPIC12D_RS08510 eacb8d55372c8a4692b53060245e975c 626 PANTHER PTHR35370 2 626 0.0 T 22-04-2016 RPIC12D_RS08510 eacb8d55372c8a4692b53060245e975c 626 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 625 1.9E-191 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like RPIC12D_RS05335 6d847621eaf9b1c9dea170e2ec6ab835 273 Pfam PF12697 Alpha/beta hydrolase family 6 253 8.8E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS05335 6d847621eaf9b1c9dea170e2ec6ab835 273 SUPERFAMILY SSF53474 148 261 1.18E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS05335 6d847621eaf9b1c9dea170e2ec6ab835 273 SUPERFAMILY SSF53474 4 104 1.18E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS05335 6d847621eaf9b1c9dea170e2ec6ab835 273 Gene3D G3DSA:3.40.50.1820 4 261 3.5E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS05335 6d847621eaf9b1c9dea170e2ec6ab835 273 PANTHER PTHR10992 2 261 1.3E-18 T 22-04-2016 RPIC12D_RS01790 c90aae83beb7b19d8bca699ad5a20399 422 Gene3D G3DSA:3.30.870.10 244 409 7.3E-36 T 22-04-2016 RPIC12D_RS01790 c90aae83beb7b19d8bca699ad5a20399 422 Gene3D G3DSA:3.30.870.10 19 187 1.3E-39 T 22-04-2016 RPIC12D_RS01790 c90aae83beb7b19d8bca699ad5a20399 422 PANTHER PTHR21248:SF5 15 419 1.5E-83 T 22-04-2016 RPIC12D_RS01790 c90aae83beb7b19d8bca699ad5a20399 422 SUPERFAMILY SSF56024 229 399 2.47E-35 T 22-04-2016 RPIC12D_RS01790 c90aae83beb7b19d8bca699ad5a20399 422 SUPERFAMILY SSF56024 14 186 2.04E-43 T 22-04-2016 RPIC12D_RS01790 c90aae83beb7b19d8bca699ad5a20399 422 SMART SM00155 324 351 0.0027 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RPIC12D_RS01790 c90aae83beb7b19d8bca699ad5a20399 422 SMART SM00155 121 148 0.0021 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RPIC12D_RS01790 c90aae83beb7b19d8bca699ad5a20399 422 Pfam PF13091 PLD-like domain 253 375 3.6E-24 T 22-04-2016 IPR025202 Phospholipase D-like domain RPIC12D_RS01790 c90aae83beb7b19d8bca699ad5a20399 422 Pfam PF13091 PLD-like domain 38 171 3.2E-14 T 22-04-2016 IPR025202 Phospholipase D-like domain RPIC12D_RS01790 c90aae83beb7b19d8bca699ad5a20399 422 Hamap MF_01917 Cardiolipin synthase B [clsB]. 16 422 47.119 T 22-04-2016 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 RPIC12D_RS01790 c90aae83beb7b19d8bca699ad5a20399 422 PANTHER PTHR21248 15 419 1.5E-83 T 22-04-2016 RPIC12D_RS06345 73e3816551b024447f655604ce1e52ef 439 Pfam PF00742 Homoserine dehydrogenase 140 318 5.2E-65 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 RPIC12D_RS06345 73e3816551b024447f655604ce1e52ef 439 Pfam PF01842 ACT domain 357 424 2.2E-13 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RPIC12D_RS06345 73e3816551b024447f655604ce1e52ef 439 SUPERFAMILY SSF51735 1 161 7.43E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS06345 73e3816551b024447f655604ce1e52ef 439 PANTHER PTHR21499 4 372 6.6E-134 T 22-04-2016 RPIC12D_RS06345 73e3816551b024447f655604ce1e52ef 439 PIRSF PIRSF000098 1 438 5.6E-163 T 22-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 RPIC12D_RS06345 73e3816551b024447f655604ce1e52ef 439 SUPERFAMILY SSF55347 140 305 1.57E-53 T 22-04-2016 RPIC12D_RS06345 73e3816551b024447f655604ce1e52ef 439 Gene3D G3DSA:3.40.50.720 1 151 1.7E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS06345 73e3816551b024447f655604ce1e52ef 439 Gene3D G3DSA:3.30.360.10 152 302 6.5E-58 T 22-04-2016 RPIC12D_RS06345 73e3816551b024447f655604ce1e52ef 439 SUPERFAMILY SSF55021 355 426 2.75E-11 T 22-04-2016 RPIC12D_RS06345 73e3816551b024447f655604ce1e52ef 439 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 186 208 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 RPIC12D_RS06345 73e3816551b024447f655604ce1e52ef 439 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 132 2.0E-23 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 RPIC12D_RS06345 73e3816551b024447f655604ce1e52ef 439 Gene3D G3DSA:3.30.70.260 356 426 2.3E-10 T 22-04-2016 RPIC12D_RS06345 73e3816551b024447f655604ce1e52ef 439 PANTHER PTHR21499:SF2 4 372 6.6E-134 T 22-04-2016 RPIC12D_RS00545 b430d8df3758c330d46e4e62508bb569 590 PANTHER PTHR13943 42 116 5.4E-177 T 22-04-2016 RPIC12D_RS00545 b430d8df3758c330d46e4e62508bb569 590 PANTHER PTHR13943 139 578 5.4E-177 T 22-04-2016 RPIC12D_RS00545 b430d8df3758c330d46e4e62508bb569 590 PANTHER PTHR13943:SF48 42 116 5.4E-177 T 22-04-2016 RPIC12D_RS00545 b430d8df3758c330d46e4e62508bb569 590 PANTHER PTHR13943:SF48 139 578 5.4E-177 T 22-04-2016 RPIC12D_RS00545 b430d8df3758c330d46e4e62508bb569 590 Pfam PF07287 Protein of unknown function (DUF1446) 8 348 5.1E-124 T 22-04-2016 IPR010839 Protein of unknown function DUF1446 RPIC12D_RS03460 065e690e6f4135f8927c8f181d5981af 615 Gene3D G3DSA:2.40.10.200 544 594 8.3E-10 T 22-04-2016 RPIC12D_RS03460 065e690e6f4135f8927c8f181d5981af 615 Gene3D G3DSA:2.40.10.200 488 509 8.3E-10 T 22-04-2016 RPIC12D_RS03460 065e690e6f4135f8927c8f181d5981af 615 SUPERFAMILY SSF46785 469 594 1.25E-42 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS03460 065e690e6f4135f8927c8f181d5981af 615 Pfam PF07514 Putative helicase 28 341 1.2E-124 T 22-04-2016 IPR011119 Uncharacterised domain, helicase/relaxase, putative RPIC12D_RS03460 065e690e6f4135f8927c8f181d5981af 615 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 27 244 4.9E-89 T 22-04-2016 IPR022391 Integrating conjugative element relaxase, PFGI-1 class RPIC12D_RS03460 065e690e6f4135f8927c8f181d5981af 615 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 471 593 1.9E-48 T 22-04-2016 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal RPIC12D_RS13405 b97e7df2856f2d531b9b194ab76f4021 95 Pfam PF07007 Protein of unknown function (DUF1311) 19 78 5.4E-11 T 22-04-2016 IPR009739 Protein of unknown function DUF1311 RPIC12D_RS04160 77d041757f86b2debdf8798dcaed71f0 111 PANTHER PTHR36455:SF1 2 97 9.5E-14 T 22-04-2016 RPIC12D_RS04160 77d041757f86b2debdf8798dcaed71f0 111 PANTHER PTHR36455 2 97 9.5E-14 T 22-04-2016 RPIC12D_RS04160 77d041757f86b2debdf8798dcaed71f0 111 Pfam PF05717 IS66 Orf2 like protein 6 102 6.9E-27 T 22-04-2016 IPR008878 Transposase IS66, Orf2 RPIC12D_RS13360 77d041757f86b2debdf8798dcaed71f0 111 PANTHER PTHR36455:SF1 2 97 9.5E-14 T 22-04-2016 RPIC12D_RS13360 77d041757f86b2debdf8798dcaed71f0 111 PANTHER PTHR36455 2 97 9.5E-14 T 22-04-2016 RPIC12D_RS13360 77d041757f86b2debdf8798dcaed71f0 111 Pfam PF05717 IS66 Orf2 like protein 6 102 6.9E-27 T 22-04-2016 IPR008878 Transposase IS66, Orf2 RPIC12D_RS14910 77d041757f86b2debdf8798dcaed71f0 111 PANTHER PTHR36455:SF1 2 97 9.5E-14 T 22-04-2016 RPIC12D_RS14910 77d041757f86b2debdf8798dcaed71f0 111 PANTHER PTHR36455 2 97 9.5E-14 T 22-04-2016 RPIC12D_RS14910 77d041757f86b2debdf8798dcaed71f0 111 Pfam PF05717 IS66 Orf2 like protein 6 102 6.9E-27 T 22-04-2016 IPR008878 Transposase IS66, Orf2 RPIC12D_RS01090 4a34c943354626ca0afbebf6482e4d82 323 SUPERFAMILY SSF56059 123 310 6.19E-55 T 22-04-2016 RPIC12D_RS01090 4a34c943354626ca0afbebf6482e4d82 323 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 311 1.0E-122 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RPIC12D_RS01090 4a34c943354626ca0afbebf6482e4d82 323 PANTHER PTHR21621:SF4 1 310 5.2E-114 T 22-04-2016 RPIC12D_RS01090 4a34c943354626ca0afbebf6482e4d82 323 Gene3D G3DSA:3.30.1490.20 136 190 6.0E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC12D_RS01090 4a34c943354626ca0afbebf6482e4d82 323 Hamap MF_00162 Glutathione synthetase [gshB]. 1 315 159.675 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RPIC12D_RS01090 4a34c943354626ca0afbebf6482e4d82 323 Gene3D G3DSA:3.30.470.20 191 299 1.8E-44 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC12D_RS01090 4a34c943354626ca0afbebf6482e4d82 323 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 123 296 9.7E-72 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RPIC12D_RS01090 4a34c943354626ca0afbebf6482e4d82 323 Gene3D G3DSA:3.40.50.20 1 128 7.1E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS01090 4a34c943354626ca0afbebf6482e4d82 323 PANTHER PTHR21621 1 310 5.2E-114 T 22-04-2016 RPIC12D_RS01090 4a34c943354626ca0afbebf6482e4d82 323 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 119 3.1E-44 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RPIC12D_RS01090 4a34c943354626ca0afbebf6482e4d82 323 SUPERFAMILY SSF52440 1 121 5.47E-42 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS05430 b366859b8e7e166a406b58ef9348dada 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 289 1.6E-112 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS05430 b366859b8e7e166a406b58ef9348dada 294 PANTHER PTHR12128 2 294 1.4E-137 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS05430 b366859b8e7e166a406b58ef9348dada 294 Pfam PF00701 Dihydrodipicolinate synthetase family 4 289 3.1E-104 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS05430 b366859b8e7e166a406b58ef9348dada 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS05430 b366859b8e7e166a406b58ef9348dada 294 SUPERFAMILY SSF51569 1 291 3.66E-106 T 22-04-2016 RPIC12D_RS05430 b366859b8e7e166a406b58ef9348dada 294 PANTHER PTHR12128:SF34 2 294 1.4E-137 T 22-04-2016 RPIC12D_RS05430 b366859b8e7e166a406b58ef9348dada 294 PIRSF PIRSF001365 1 294 1.1E-92 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS05430 b366859b8e7e166a406b58ef9348dada 294 Gene3D G3DSA:3.20.20.70 2 293 2.0E-121 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS05430 b366859b8e7e166a406b58ef9348dada 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 4.1E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS05430 b366859b8e7e166a406b58ef9348dada 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 4.1E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS05430 b366859b8e7e166a406b58ef9348dada 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 4.1E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS05430 b366859b8e7e166a406b58ef9348dada 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 4.1E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS05430 b366859b8e7e166a406b58ef9348dada 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 289 68.055 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS05430 b366859b8e7e166a406b58ef9348dada 294 SMART SM01130 3 291 6.4E-147 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS13530 c9b277249c9a220610dfeaa81448b3ea 575 Gene3D G3DSA:3.40.50.300 303 573 3.5E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13530 c9b277249c9a220610dfeaa81448b3ea 575 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 392 406 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC12D_RS13530 c9b277249c9a220610dfeaa81448b3ea 575 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 36 134 4.7E-10 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 RPIC12D_RS13530 c9b277249c9a220610dfeaa81448b3ea 575 PANTHER PTHR30258 2 575 1.3E-208 T 22-04-2016 RPIC12D_RS13530 c9b277249c9a220610dfeaa81448b3ea 575 SUPERFAMILY SSF160246 2 134 1.57E-22 T 22-04-2016 RPIC12D_RS13530 c9b277249c9a220610dfeaa81448b3ea 575 SUPERFAMILY SSF52540 167 571 1.08E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13530 c9b277249c9a220610dfeaa81448b3ea 575 Pfam PF00437 Type II/IV secretion system protein 187 464 2.9E-82 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC12D_RS13530 c9b277249c9a220610dfeaa81448b3ea 575 Gene3D G3DSA:3.30.450.90 162 297 6.6E-47 T 22-04-2016 RPIC12D_RS13530 c9b277249c9a220610dfeaa81448b3ea 575 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 3 574 1.8E-231 T 22-04-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 RPIC12D_RS13530 c9b277249c9a220610dfeaa81448b3ea 575 SMART SM00382 325 446 0.0079 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS13530 c9b277249c9a220610dfeaa81448b3ea 575 PANTHER PTHR30258:SF1 2 575 1.3E-208 T 22-04-2016 RPIC12D_RS01760 3df1c700c7107a843eceaf1d79c38260 113 PANTHER PTHR34404:SF2 2 96 1.0E-19 T 22-04-2016 RPIC12D_RS01760 3df1c700c7107a843eceaf1d79c38260 113 Pfam PF09723 Zinc ribbon domain 1 40 4.2E-17 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RPIC12D_RS01760 3df1c700c7107a843eceaf1d79c38260 113 SMART SM00834 1 42 1.3E-20 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RPIC12D_RS01760 3df1c700c7107a843eceaf1d79c38260 113 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 2.6E-23 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RPIC12D_RS01760 3df1c700c7107a843eceaf1d79c38260 113 PANTHER PTHR34404 2 96 1.0E-19 T 22-04-2016 RPIC12D_RS00990 8d81d059b59461f14a241d8738b619e1 218 Gene3D G3DSA:3.40.50.300 2 107 1.0E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS00990 8d81d059b59461f14a241d8738b619e1 218 SUPERFAMILY SSF52540 4 213 1.01E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS00990 8d81d059b59461f14a241d8738b619e1 218 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 121 212 8.1E-28 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain RPIC12D_RS00990 8d81d059b59461f14a241d8738b619e1 218 Pfam PF01078 Magnesium chelatase, subunit ChlI 1 113 5.2E-53 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain RPIC12D_RS00990 8d81d059b59461f14a241d8738b619e1 218 PANTHER PTHR32039 1 212 3.8E-104 T 22-04-2016 RPIC12D_RS00990 8d81d059b59461f14a241d8738b619e1 218 PANTHER PTHR32039:SF7 1 212 3.8E-104 T 22-04-2016 IPR004482 Mg chelatase-related protein RPIC12D_RS13600 4aa5eb09588152f5e54372e3b4e3c16a 399 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 335 34.707 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 RPIC12D_RS13600 4aa5eb09588152f5e54372e3b4e3c16a 399 Gene3D G3DSA:3.30.1330.20 214 319 6.1E-44 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RPIC12D_RS13600 4aa5eb09588152f5e54372e3b4e3c16a 399 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 RPIC12D_RS13600 4aa5eb09588152f5e54372e3b4e3c16a 399 PANTHER PTHR30314:SF3 4 397 2.5E-159 T 22-04-2016 RPIC12D_RS13600 4aa5eb09588152f5e54372e3b4e3c16a 399 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 328 8.2E-117 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 RPIC12D_RS13600 4aa5eb09588152f5e54372e3b4e3c16a 399 PRINTS PR00423 Cell division protein FtsZ signature 125 146 2.2E-45 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RPIC12D_RS13600 4aa5eb09588152f5e54372e3b4e3c16a 399 PRINTS PR00423 Cell division protein FtsZ signature 97 117 2.2E-45 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RPIC12D_RS13600 4aa5eb09588152f5e54372e3b4e3c16a 399 PRINTS PR00423 Cell division protein FtsZ signature 211 232 2.2E-45 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RPIC12D_RS13600 4aa5eb09588152f5e54372e3b4e3c16a 399 PRINTS PR00423 Cell division protein FtsZ signature 188 210 2.2E-45 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RPIC12D_RS13600 4aa5eb09588152f5e54372e3b4e3c16a 399 SUPERFAMILY SSF55307 203 317 2.75E-39 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal RPIC12D_RS13600 4aa5eb09588152f5e54372e3b4e3c16a 399 SMART SM00865 206 324 4.2E-52 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RPIC12D_RS13600 4aa5eb09588152f5e54372e3b4e3c16a 399 Pfam PF12327 FtsZ family, C-terminal domain 221 315 4.0E-31 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal RPIC12D_RS13600 4aa5eb09588152f5e54372e3b4e3c16a 399 Gene3D G3DSA:3.40.50.1440 16 213 1.4E-82 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RPIC12D_RS13600 4aa5eb09588152f5e54372e3b4e3c16a 399 PANTHER PTHR30314 4 397 2.5E-159 T 22-04-2016 RPIC12D_RS13600 4aa5eb09588152f5e54372e3b4e3c16a 399 SUPERFAMILY SSF52490 16 207 3.01E-60 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RPIC12D_RS13600 4aa5eb09588152f5e54372e3b4e3c16a 399 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 172 2.1E-34 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RPIC12D_RS13600 4aa5eb09588152f5e54372e3b4e3c16a 399 SMART SM00864 15 204 5.4E-98 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RPIC12D_RS00525 0922fca7262ecbd4d02ca93d52bb9bc0 227 PANTHER PTHR41536:SF1 2 227 3.3E-118 T 22-04-2016 RPIC12D_RS00525 0922fca7262ecbd4d02ca93d52bb9bc0 227 PANTHER PTHR41536 2 227 3.3E-118 T 22-04-2016 RPIC12D_RS00525 0922fca7262ecbd4d02ca93d52bb9bc0 227 Gene3D G3DSA:2.60.120.620 135 170 8.4E-4 T 22-04-2016 RPIC12D_RS00525 0922fca7262ecbd4d02ca93d52bb9bc0 227 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 6.1E-14 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 RPIC12D_RS00525 0922fca7262ecbd4d02ca93d52bb9bc0 227 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 227 46.259 T 22-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 RPIC12D_RS00525 0922fca7262ecbd4d02ca93d52bb9bc0 227 SUPERFAMILY SSF51197 3 174 4.53E-7 T 22-04-2016 RPIC12D_RS00525 0922fca7262ecbd4d02ca93d52bb9bc0 227 SMART SM00702 1 177 1.4E-21 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 RPIC12D_RS06095 3ecb2ea50fdc5226fa0e034d48e1c4af 318 SUPERFAMILY SSF55120 17 255 6.04E-82 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS06095 3ecb2ea50fdc5226fa0e034d48e1c4af 318 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 39 190 8.6E-57 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 RPIC12D_RS06095 3ecb2ea50fdc5226fa0e034d48e1c4af 318 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 17 316 19.654 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS06095 3ecb2ea50fdc5226fa0e034d48e1c4af 318 PANTHER PTHR13767 14 316 3.7E-122 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS06095 3ecb2ea50fdc5226fa0e034d48e1c4af 318 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 191 248 5.3E-16 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal RPIC12D_RS06095 3ecb2ea50fdc5226fa0e034d48e1c4af 318 PANTHER PTHR13767:SF2 14 316 3.7E-122 T 22-04-2016 RPIC12D_RS06095 3ecb2ea50fdc5226fa0e034d48e1c4af 318 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 316 8.1E-15 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS06095 3ecb2ea50fdc5226fa0e034d48e1c4af 318 Gene3D G3DSA:2.30.130.10 251 317 8.5E-7 T 22-04-2016 IPR015947 PUA-like domain RPIC12D_RS06095 3ecb2ea50fdc5226fa0e034d48e1c4af 318 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 18 229 1.8E-78 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS06095 3ecb2ea50fdc5226fa0e034d48e1c4af 318 SUPERFAMILY SSF88697 251 317 8.95E-5 T 22-04-2016 IPR015947 PUA-like domain RPIC12D_RS12490 6575d5c9bd78613fdbc78347323b9fd2 472 PANTHER PTHR11748 18 470 3.1E-237 T 22-04-2016 RPIC12D_RS12490 6575d5c9bd78613fdbc78347323b9fd2 472 Gene3D G3DSA:3.30.465.10 109 227 4.5E-48 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC12D_RS12490 6575d5c9bd78613fdbc78347323b9fd2 472 Pfam PF02913 FAD linked oxidases, C-terminal domain 227 469 1.4E-61 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RPIC12D_RS12490 6575d5c9bd78613fdbc78347323b9fd2 472 Pfam PF01565 FAD binding domain 53 189 3.6E-39 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIC12D_RS12490 6575d5c9bd78613fdbc78347323b9fd2 472 Gene3D G3DSA:1.10.45.10 430 469 3.7E-15 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RPIC12D_RS12490 6575d5c9bd78613fdbc78347323b9fd2 472 SUPERFAMILY SSF55103 230 470 6.7E-72 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RPIC12D_RS12490 6575d5c9bd78613fdbc78347323b9fd2 472 SUPERFAMILY SSF56176 12 227 2.1E-72 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS12490 6575d5c9bd78613fdbc78347323b9fd2 472 PANTHER PTHR11748:SF97 18 470 3.1E-237 T 22-04-2016 RPIC12D_RS12490 6575d5c9bd78613fdbc78347323b9fd2 472 Gene3D G3DSA:3.30.43.10 8 108 7.6E-30 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RPIC12D_RS21230 c0a91e0f4ab0dacd35b75b4a11ff33a0 173 Gene3D G3DSA:3.40.225.10 36 172 8.7E-37 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS21230 c0a91e0f4ab0dacd35b75b4a11ff33a0 173 SUPERFAMILY SSF53639 36 173 1.22E-36 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS21230 c0a91e0f4ab0dacd35b75b4a11ff33a0 173 PANTHER PTHR10672 32 173 1.7E-64 T 22-04-2016 RPIC12D_RS21230 c0a91e0f4ab0dacd35b75b4a11ff33a0 173 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 42 171 3.6E-31 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS21230 c0a91e0f4ab0dacd35b75b4a11ff33a0 173 SMART SM01007 41 173 6.3E-15 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS13000 d5cbe3d6b13c443087195be2d2b2a17c 313 Pfam PF00701 Dihydrodipicolinate synthetase family 14 300 2.7E-33 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS13000 d5cbe3d6b13c443087195be2d2b2a17c 313 PANTHER PTHR12128 1 313 2.5E-126 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS13000 d5cbe3d6b13c443087195be2d2b2a17c 313 Gene3D G3DSA:3.20.20.70 9 308 2.9E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS13000 d5cbe3d6b13c443087195be2d2b2a17c 313 PANTHER PTHR12128:SF29 1 313 2.5E-126 T 22-04-2016 RPIC12D_RS13000 d5cbe3d6b13c443087195be2d2b2a17c 313 SMART SM01130 12 305 8.7E-64 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS13000 d5cbe3d6b13c443087195be2d2b2a17c 313 SUPERFAMILY SSF51569 10 307 2.09E-66 T 22-04-2016 RPIC12D_RS13000 d5cbe3d6b13c443087195be2d2b2a17c 313 PIRSF PIRSF001365 9 311 1.9E-51 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS09215 536897e5d7000266b8fef38f527779e7 298 SUPERFAMILY SSF51621 7 292 1.12E-99 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS09215 536897e5d7000266b8fef38f527779e7 298 Gene3D G3DSA:3.20.20.60 8 289 2.1E-99 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS09215 536897e5d7000266b8fef38f527779e7 298 PANTHER PTHR21631:SF4 1 297 7.8E-158 T 22-04-2016 RPIC12D_RS09215 536897e5d7000266b8fef38f527779e7 298 ProSitePatterns PS00161 Isocitrate lyase signature. 124 129 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 RPIC12D_RS09215 536897e5d7000266b8fef38f527779e7 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 13 257 3.2E-49 T 22-04-2016 RPIC12D_RS09215 536897e5d7000266b8fef38f527779e7 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 7 295 49.772 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 RPIC12D_RS09215 536897e5d7000266b8fef38f527779e7 298 PANTHER PTHR21631 1 297 7.8E-158 T 22-04-2016 RPIC12D_RS09215 536897e5d7000266b8fef38f527779e7 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 10 294 3.2E-129 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 RPIC12D_RS05450 4ea9635aa352476d8a0a50afecfb2654 409 SMART SM00558 109 247 7.7E-4 T 22-04-2016 IPR003347 JmjC domain RPIC12D_RS05450 4ea9635aa352476d8a0a50afecfb2654 409 SUPERFAMILY SSF51197 22 314 5.49E-71 T 22-04-2016 RPIC12D_RS05450 4ea9635aa352476d8a0a50afecfb2654 409 Pfam PF08007 Cupin superfamily protein 31 340 5.4E-94 T 22-04-2016 IPR003347 JmjC domain RPIC12D_RS05450 4ea9635aa352476d8a0a50afecfb2654 409 PANTHER PTHR13096:SF5 29 252 1.2E-34 T 22-04-2016 RPIC12D_RS05450 4ea9635aa352476d8a0a50afecfb2654 409 PANTHER PTHR13096 29 252 1.2E-34 T 22-04-2016 RPIC12D_RS05450 4ea9635aa352476d8a0a50afecfb2654 409 Gene3D G3DSA:2.60.120.650 22 233 1.6E-40 T 22-04-2016 RPIC12D_RS04130 64b870ee0e74c32fb21dab9148012bb2 818 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 461 754 2.6E-6 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC12D_RS04130 64b870ee0e74c32fb21dab9148012bb2 818 SUPERFAMILY SSF56219 458 761 1.18E-32 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC12D_RS04130 64b870ee0e74c32fb21dab9148012bb2 818 Gene3D G3DSA:3.60.10.10 458 761 2.3E-18 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC12D_RS04130 64b870ee0e74c32fb21dab9148012bb2 818 PANTHER PTHR11371:SF31 9 764 1.4E-181 T 22-04-2016 RPIC12D_RS04130 64b870ee0e74c32fb21dab9148012bb2 818 PANTHER PTHR11371 9 764 1.4E-181 T 22-04-2016 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 RPIC12D_RS04130 64b870ee0e74c32fb21dab9148012bb2 818 Pfam PF00932 Lamin Tail Domain 17 122 1.5E-14 T 22-04-2016 IPR001322 Lamin Tail Domain RPIC12D_RS13145 bc7f6328fd69954485f15385ae208f50 311 PANTHER PTHR10584 1 303 1.8E-99 T 22-04-2016 RPIC12D_RS13145 bc7f6328fd69954485f15385ae208f50 311 Pfam PF00294 pfkB family carbohydrate kinase 25 290 3.9E-42 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB RPIC12D_RS13145 bc7f6328fd69954485f15385ae208f50 311 PANTHER PTHR10584:SF15 1 303 1.8E-99 T 22-04-2016 RPIC12D_RS13145 bc7f6328fd69954485f15385ae208f50 311 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RPIC12D_RS13145 bc7f6328fd69954485f15385ae208f50 311 SUPERFAMILY SSF53613 4 291 2.81E-65 T 22-04-2016 IPR029056 Ribokinase-like RPIC12D_RS13145 bc7f6328fd69954485f15385ae208f50 311 Gene3D G3DSA:3.40.1190.20 4 304 2.1E-57 T 22-04-2016 IPR029056 Ribokinase-like RPIC12D_RS00935 795b5626b764891c127e70f469a0daad 400 SMART SM00936 292 382 1.7E-29 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC12D_RS00935 795b5626b764891c127e70f469a0daad 400 PANTHER PTHR21581:SF3 8 399 1.4E-98 T 22-04-2016 RPIC12D_RS00935 795b5626b764891c127e70f469a0daad 400 SUPERFAMILY SSF69189 292 384 1.1E-22 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC12D_RS00935 795b5626b764891c127e70f469a0daad 400 SUPERFAMILY SSF56601 19 292 4.2E-77 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS00935 795b5626b764891c127e70f469a0daad 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 152 165 1.6E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RPIC12D_RS00935 795b5626b764891c127e70f469a0daad 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 70 81 1.6E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RPIC12D_RS00935 795b5626b764891c127e70f469a0daad 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 125 142 1.6E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RPIC12D_RS00935 795b5626b764891c127e70f469a0daad 400 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 252 1.6E-75 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 RPIC12D_RS00935 795b5626b764891c127e70f469a0daad 400 Gene3D G3DSA:3.40.710.10 34 291 4.1E-93 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS00935 795b5626b764891c127e70f469a0daad 400 Gene3D G3DSA:2.60.410.10 292 382 2.5E-26 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC12D_RS00935 795b5626b764891c127e70f469a0daad 400 PANTHER PTHR21581 8 399 1.4E-98 T 22-04-2016 RPIC12D_RS00935 795b5626b764891c127e70f469a0daad 400 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 382 2.9E-21 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC12D_RS01925 684b27ecc0ffb857b18bbfbd1166cc45 421 Gene3D G3DSA:1.10.240.10 254 351 3.9E-34 T 22-04-2016 RPIC12D_RS01925 684b27ecc0ffb857b18bbfbd1166cc45 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 237 249 1.3E-25 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RPIC12D_RS01925 684b27ecc0ffb857b18bbfbd1166cc45 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 72 94 1.3E-25 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RPIC12D_RS01925 684b27ecc0ffb857b18bbfbd1166cc45 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 204 226 1.3E-25 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RPIC12D_RS01925 684b27ecc0ffb857b18bbfbd1166cc45 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 187 202 1.3E-25 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RPIC12D_RS01925 684b27ecc0ffb857b18bbfbd1166cc45 421 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 24 420 46.849 T 22-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 RPIC12D_RS01925 684b27ecc0ffb857b18bbfbd1166cc45 421 Gene3D G3DSA:3.40.50.620 47 253 6.9E-79 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS01925 684b27ecc0ffb857b18bbfbd1166cc45 421 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 68 78 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS01925 684b27ecc0ffb857b18bbfbd1166cc45 421 SUPERFAMILY SSF55174 342 417 8.51E-19 T 22-04-2016 RPIC12D_RS01925 684b27ecc0ffb857b18bbfbd1166cc45 421 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 44 420 3.7E-117 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RPIC12D_RS01925 684b27ecc0ffb857b18bbfbd1166cc45 421 Gene3D G3DSA:3.10.290.10 352 420 1.1E-24 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS01925 684b27ecc0ffb857b18bbfbd1166cc45 421 PANTHER PTHR11766:SF1 24 421 6.0E-218 T 22-04-2016 RPIC12D_RS01925 684b27ecc0ffb857b18bbfbd1166cc45 421 PANTHER PTHR11766 24 421 6.0E-218 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 RPIC12D_RS01925 684b27ecc0ffb857b18bbfbd1166cc45 421 Pfam PF01479 S4 domain 362 405 7.4E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS01925 684b27ecc0ffb857b18bbfbd1166cc45 421 SMART SM00363 360 421 6.7E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS01925 684b27ecc0ffb857b18bbfbd1166cc45 421 SUPERFAMILY SSF52374 45 338 5.63E-88 T 22-04-2016 RPIC12D_RS01925 684b27ecc0ffb857b18bbfbd1166cc45 421 Pfam PF00579 tRNA synthetases class I (W and Y) 59 339 3.1E-73 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS15935 b98e5871f3ac2263105f0e99de799820 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 110 188 1.6E-12 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RPIC12D_RS15935 b98e5871f3ac2263105f0e99de799820 209 SUPERFAMILY SSF47616 82 198 5.85E-24 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS15935 b98e5871f3ac2263105f0e99de799820 209 PANTHER PTHR11260 1 200 3.3E-59 T 22-04-2016 RPIC12D_RS15935 b98e5871f3ac2263105f0e99de799820 209 Gene3D G3DSA:3.40.30.10 1 88 8.3E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS15935 b98e5871f3ac2263105f0e99de799820 209 PANTHER PTHR11260:SF154 1 200 3.3E-59 T 22-04-2016 RPIC12D_RS15935 b98e5871f3ac2263105f0e99de799820 209 SUPERFAMILY SSF52833 1 76 6.68E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS15935 b98e5871f3ac2263105f0e99de799820 209 Gene3D G3DSA:1.20.1050.10 89 187 1.8E-33 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS10260 629bdd3eb28d0d16869a23759b013e2c 329 SUPERFAMILY SSF103481 205 300 1.11E-8 T 22-04-2016 RPIC12D_RS10260 629bdd3eb28d0d16869a23759b013e2c 329 PANTHER PTHR22911 24 307 2.4E-45 T 22-04-2016 RPIC12D_RS10260 629bdd3eb28d0d16869a23759b013e2c 329 PANTHER PTHR22911:SF6 24 307 2.4E-45 T 22-04-2016 RPIC12D_RS10260 629bdd3eb28d0d16869a23759b013e2c 329 Pfam PF00892 EamA-like transporter family 24 155 5.5E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS07440 f1883610b1f5b3813e6772bddf298c8e 144 Gene3D G3DSA:3.10.129.10 12 138 1.7E-36 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS07440 f1883610b1f5b3813e6772bddf298c8e 144 SUPERFAMILY SSF54637 4 128 1.16E-30 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS07440 f1883610b1f5b3813e6772bddf298c8e 144 PANTHER PTHR12418 13 142 3.3E-24 T 22-04-2016 RPIC12D_RS07440 f1883610b1f5b3813e6772bddf298c8e 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 14 125 9.8E-23 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain RPIC12D_RS07440 f1883610b1f5b3813e6772bddf298c8e 144 PANTHER PTHR12418:SF27 13 142 3.3E-24 T 22-04-2016 RPIC12D_RS07440 f1883610b1f5b3813e6772bddf298c8e 144 Pfam PF03061 Thioesterase superfamily 47 120 3.4E-14 T 22-04-2016 IPR006683 Thioesterase domain RPIC12D_RS03975 c23c461d6d7c6fdaf30ff4ecf747d48d 264 PANTHER PTHR24198 65 260 2.9E-43 T 22-04-2016 RPIC12D_RS03975 c23c461d6d7c6fdaf30ff4ecf747d48d 264 Pfam PF12796 Ankyrin repeats (3 copies) 73 132 9.6E-7 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RPIC12D_RS03975 c23c461d6d7c6fdaf30ff4ecf747d48d 264 Pfam PF12796 Ankyrin repeats (3 copies) 141 236 1.9E-12 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RPIC12D_RS03975 c23c461d6d7c6fdaf30ff4ecf747d48d 264 Gene3D G3DSA:1.25.40.20 132 258 4.2E-33 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RPIC12D_RS03975 c23c461d6d7c6fdaf30ff4ecf747d48d 264 Gene3D G3DSA:1.25.40.20 73 131 1.5E-14 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RPIC12D_RS03975 c23c461d6d7c6fdaf30ff4ecf747d48d 264 SUPERFAMILY SSF48403 70 260 1.42E-44 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RPIC12D_RS03975 c23c461d6d7c6fdaf30ff4ecf747d48d 264 PRINTS PR01415 Ankyrin repeat signature 168 183 3.7E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC12D_RS03975 c23c461d6d7c6fdaf30ff4ecf747d48d 264 PRINTS PR01415 Ankyrin repeat signature 221 235 3.7E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC12D_RS03975 c23c461d6d7c6fdaf30ff4ecf747d48d 264 SMART SM00248 200 234 7.2 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC12D_RS03975 c23c461d6d7c6fdaf30ff4ecf747d48d 264 SMART SM00248 134 163 0.4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC12D_RS03975 c23c461d6d7c6fdaf30ff4ecf747d48d 264 SMART SM00248 101 130 0.3 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC12D_RS03975 c23c461d6d7c6fdaf30ff4ecf747d48d 264 SMART SM00248 68 97 3400.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC12D_RS03975 c23c461d6d7c6fdaf30ff4ecf747d48d 264 SMART SM00248 167 196 0.21 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC12D_RS16060 bf5243c031297e2aac1dcf3b2e5e4eeb 318 Pfam PF13460 NAD(P)H-binding 12 165 9.5E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS16060 bf5243c031297e2aac1dcf3b2e5e4eeb 318 SUPERFAMILY SSF51735 7 314 1.73E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS16060 bf5243c031297e2aac1dcf3b2e5e4eeb 318 Gene3D G3DSA:3.40.50.720 8 311 1.8E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS16060 bf5243c031297e2aac1dcf3b2e5e4eeb 318 PANTHER PTHR10366 275 315 1.9E-22 T 22-04-2016 RPIC12D_RS16060 bf5243c031297e2aac1dcf3b2e5e4eeb 318 PANTHER PTHR10366 7 259 1.9E-22 T 22-04-2016 RPIC12D_RS04510 d01757f598a5b6642bf65245ac720f45 192 Pfam PF02417 Chromate transporter 23 180 1.1E-31 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 RPIC12D_RS04510 d01757f598a5b6642bf65245ac720f45 192 PANTHER PTHR33567 23 192 2.6E-28 T 22-04-2016 RPIC12D_RS07260 fa529bbf7d2984835787c18a81db84a7 403 PANTHER PTHR23501 18 389 3.4E-106 T 22-04-2016 RPIC12D_RS07260 fa529bbf7d2984835787c18a81db84a7 403 Gene3D G3DSA:1.20.1250.20 22 196 1.1E-23 T 22-04-2016 RPIC12D_RS07260 fa529bbf7d2984835787c18a81db84a7 403 Gene3D G3DSA:1.20.1250.20 214 392 2.6E-13 T 22-04-2016 RPIC12D_RS07260 fa529bbf7d2984835787c18a81db84a7 403 PANTHER PTHR23501:SF28 18 389 3.4E-106 T 22-04-2016 RPIC12D_RS07260 fa529bbf7d2984835787c18a81db84a7 403 Pfam PF07690 Major Facilitator Superfamily 26 355 7.2E-32 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS07260 fa529bbf7d2984835787c18a81db84a7 403 SUPERFAMILY SSF103473 14 393 1.27E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS01450 4a4ce954c446102595144790e6f086f1 262 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS01450 4a4ce954c446102595144790e6f086f1 262 SUPERFAMILY SSF52540 21 258 4.22E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01450 4a4ce954c446102595144790e6f086f1 262 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 20 262 6.8E-117 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 RPIC12D_RS01450 4a4ce954c446102595144790e6f086f1 262 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 236 257 3.6E-5 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RPIC12D_RS01450 4a4ce954c446102595144790e6f086f1 262 Pfam PF00005 ABC transporter 36 187 7.5E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS01450 4a4ce954c446102595144790e6f086f1 262 PANTHER PTHR24220 22 259 9.4E-134 T 22-04-2016 RPIC12D_RS01450 4a4ce954c446102595144790e6f086f1 262 Gene3D G3DSA:3.40.50.300 19 255 2.8E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01450 4a4ce954c446102595144790e6f086f1 262 SMART SM00382 45 252 8.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS01450 4a4ce954c446102595144790e6f086f1 262 PANTHER PTHR24220:SF497 22 259 9.4E-134 T 22-04-2016 RPIC12D_RS02610 b028dadc37f6019233ae2be892d46fae 222 PANTHER PTHR11260 7 201 5.1E-63 T 22-04-2016 RPIC12D_RS02610 b028dadc37f6019233ae2be892d46fae 222 Gene3D G3DSA:1.20.1050.10 91 191 8.4E-19 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS02610 b028dadc37f6019233ae2be892d46fae 222 SUPERFAMILY SSF47616 86 199 8.38E-20 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS02610 b028dadc37f6019233ae2be892d46fae 222 Pfam PF13410 Glutathione S-transferase, C-terminal domain 132 172 5.9E-9 T 22-04-2016 RPIC12D_RS02610 b028dadc37f6019233ae2be892d46fae 222 SUPERFAMILY SSF52833 6 88 9.97E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS02610 b028dadc37f6019233ae2be892d46fae 222 Gene3D G3DSA:3.40.30.10 8 90 2.0E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS02610 b028dadc37f6019233ae2be892d46fae 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 7 78 5.7E-14 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC12D_RS02610 b028dadc37f6019233ae2be892d46fae 222 PANTHER PTHR11260:SF253 7 201 5.1E-63 T 22-04-2016 RPIC12D_RS16230 98fe14f0fec823d6525b17810d2a1c8e 267 PANTHER PTHR34108 154 267 1.0E-37 T 22-04-2016 RPIC12D_RS16230 98fe14f0fec823d6525b17810d2a1c8e 267 PANTHER PTHR34108 1 138 1.0E-37 T 22-04-2016 RPIC12D_RS16230 98fe14f0fec823d6525b17810d2a1c8e 267 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 9 264 8.0E-49 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 RPIC12D_RS16230 98fe14f0fec823d6525b17810d2a1c8e 267 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 6 104 1.2E-8 T 22-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 RPIC12D_RS16230 98fe14f0fec823d6525b17810d2a1c8e 267 Gene3D G3DSA:2.160.20.70 149 265 6.1E-39 T 22-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 RPIC12D_RS16230 98fe14f0fec823d6525b17810d2a1c8e 267 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 8 265 26.431 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 RPIC12D_RS16230 98fe14f0fec823d6525b17810d2a1c8e 267 PANTHER PTHR34108:SF1 154 267 1.0E-37 T 22-04-2016 RPIC12D_RS16230 98fe14f0fec823d6525b17810d2a1c8e 267 PANTHER PTHR34108:SF1 1 138 1.0E-37 T 22-04-2016 RPIC12D_RS16230 98fe14f0fec823d6525b17810d2a1c8e 267 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 161 261 3.8E-30 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 RPIC12D_RS16230 98fe14f0fec823d6525b17810d2a1c8e 267 SUPERFAMILY SSF63848 159 265 4.18E-32 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 RPIC12D_RS07865 cb5454429a745d49f42f5693ab579b64 277 Gene3D G3DSA:1.10.600.10 15 276 1.0E-55 T 22-04-2016 IPR008949 Isoprenoid synthase domain RPIC12D_RS07865 cb5454429a745d49f42f5693ab579b64 277 PANTHER PTHR31480 19 277 2.7E-30 T 22-04-2016 RPIC12D_RS07865 cb5454429a745d49f42f5693ab579b64 277 SUPERFAMILY SSF48576 4 276 1.06E-60 T 22-04-2016 IPR008949 Isoprenoid synthase domain RPIC12D_RS07865 cb5454429a745d49f42f5693ab579b64 277 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 10 275 1.5E-97 T 22-04-2016 IPR017828 Squalene/phytoene synthase HpnD GO:0016117|GO:0016767 RPIC12D_RS07865 cb5454429a745d49f42f5693ab579b64 277 Pfam PF00494 Squalene/phytoene synthase 16 264 6.1E-55 T 22-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 RPIC12D_RS12840 4ef7e25d2f256f8734e9565ea1460b88 470 SUPERFAMILY SSF53335 263 428 1.73E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS12840 4ef7e25d2f256f8734e9565ea1460b88 470 Gene3D G3DSA:3.40.50.150 282 419 3.5E-8 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS12840 4ef7e25d2f256f8734e9565ea1460b88 470 Pfam PF13649 Methyltransferase domain 288 401 1.4E-8 T 22-04-2016 RPIC12D_RS06625 b2d64606c5982aa353875310106adbb2 521 Gene3D G3DSA:3.10.105.10 288 489 1.3E-55 T 22-04-2016 RPIC12D_RS06625 b2d64606c5982aa353875310106adbb2 521 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 435 4.1E-91 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RPIC12D_RS06625 b2d64606c5982aa353875310106adbb2 521 Gene3D G3DSA:3.40.190.10 139 287 5.2E-48 T 22-04-2016 RPIC12D_RS06625 b2d64606c5982aa353875310106adbb2 521 PANTHER PTHR30290:SF32 17 520 4.0E-237 T 22-04-2016 RPIC12D_RS06625 b2d64606c5982aa353875310106adbb2 521 SUPERFAMILY SSF53850 38 519 1.93E-139 T 22-04-2016 RPIC12D_RS06625 b2d64606c5982aa353875310106adbb2 521 PIRSF PIRSF002741 29 521 1.5E-106 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RPIC12D_RS06625 b2d64606c5982aa353875310106adbb2 521 PANTHER PTHR30290 17 520 4.0E-237 T 22-04-2016 RPIC12D_RS07000 1b8310b12b214899ebdf4cc302d49f1c 158 PANTHER PTHR12589 7 157 1.9E-32 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RPIC12D_RS07000 1b8310b12b214899ebdf4cc302d49f1c 158 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 7 121 1.0E-26 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RPIC12D_RS07000 1b8310b12b214899ebdf4cc302d49f1c 158 SUPERFAMILY SSF55620 4 149 6.12E-38 T 22-04-2016 RPIC12D_RS07000 1b8310b12b214899ebdf4cc302d49f1c 158 Gene3D G3DSA:3.30.479.10 2 149 1.9E-38 T 22-04-2016 RPIC12D_RS07000 1b8310b12b214899ebdf4cc302d49f1c 158 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 7 150 1.7E-33 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RPIC12D_RS04575 9e272323ab934f51d347bf3d4fd0170f 156 Gene3D G3DSA:3.30.1330.40 5 155 6.0E-61 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RPIC12D_RS04575 9e272323ab934f51d347bf3d4fd0170f 156 SUPERFAMILY SSF55298 6 155 2.36E-50 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RPIC12D_RS04575 9e272323ab934f51d347bf3d4fd0170f 156 PANTHER PTHR11803:SF2 8 155 2.2E-41 T 22-04-2016 RPIC12D_RS04575 9e272323ab934f51d347bf3d4fd0170f 156 PANTHER PTHR11803 8 155 2.2E-41 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family RPIC12D_RS04575 9e272323ab934f51d347bf3d4fd0170f 156 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 10 155 1.4E-28 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RPIC12D_RS05775 b3a6099767c041fefd9720961eb17d3e 383 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 4 353 72.114 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS05775 b3a6099767c041fefd9720961eb17d3e 383 Pfam PF04055 Radical SAM superfamily 108 283 1.3E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC12D_RS05775 b3a6099767c041fefd9720961eb17d3e 383 PIRSF PIRSF006004 3 365 2.2E-146 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS05775 b3a6099767c041fefd9720961eb17d3e 383 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 5 357 5.6E-135 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS05775 b3a6099767c041fefd9720961eb17d3e 383 SUPERFAMILY SSF102114 103 310 7.19E-13 T 22-04-2016 RPIC12D_RS05775 b3a6099767c041fefd9720961eb17d3e 383 Gene3D G3DSA:3.20.20.70 104 332 4.4E-11 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS05775 b3a6099767c041fefd9720961eb17d3e 383 PANTHER PTHR30544 6 356 2.6E-164 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS05775 b3a6099767c041fefd9720961eb17d3e 383 PANTHER PTHR30544:SF5 6 356 2.6E-164 T 22-04-2016 RPIC12D_RS03190 c206eb608e79447cc2bdfa3651d41baf 259 Pfam PF08900 Domain of unknown function (DUF1845) 13 223 3.9E-79 T 22-04-2016 IPR014996 Integrating conjugative element protein, PFL4669 RPIC12D_RS03190 c206eb608e79447cc2bdfa3651d41baf 259 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 14 226 8.9E-89 T 22-04-2016 IPR014996 Integrating conjugative element protein, PFL4669 RPIC12D_RS04360 c74c78348110721e07a030c60fabc153 357 PANTHER PTHR19328:SF33 18 357 2.7E-97 T 22-04-2016 RPIC12D_RS04360 c74c78348110721e07a030c60fabc153 357 Pfam PF07995 Glucose / Sorbosone dehydrogenase 123 350 1.3E-15 T 22-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 RPIC12D_RS04360 c74c78348110721e07a030c60fabc153 357 Gene3D G3DSA:2.120.10.30 20 356 1.5E-68 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like RPIC12D_RS04360 c74c78348110721e07a030c60fabc153 357 PANTHER PTHR19328 18 357 2.7E-97 T 22-04-2016 RPIC12D_RS04360 c74c78348110721e07a030c60fabc153 357 SUPERFAMILY SSF50952 12 355 1.57E-34 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RPIC12D_RS09145 f1a4185623b225adebd13ff05ded6034 969 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 925 968 9.4E-20 T 22-04-2016 IPR020011 Motility protein FimV, C-terminal RPIC12D_RS09145 f1a4185623b225adebd13ff05ded6034 969 Gene3D G3DSA:1.25.40.10 713 714 1.8E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS09145 f1a4185623b225adebd13ff05ded6034 969 Gene3D G3DSA:1.25.40.10 923 952 1.8E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS09145 f1a4185623b225adebd13ff05ded6034 969 Gene3D G3DSA:1.25.40.10 615 671 1.8E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS09145 f1a4185623b225adebd13ff05ded6034 969 Gene3D G3DSA:3.10.350.10 222 279 8.5E-4 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS09145 f1a4185623b225adebd13ff05ded6034 969 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 228 300 4.9E-25 T 22-04-2016 IPR020012 Motility protein FimV, N-terminal RPIC12D_RS15860 2f147451ecbb4dcccfaafff2aab26bed 458 PANTHER PTHR30182:SF1 1 456 1.4E-237 T 22-04-2016 RPIC12D_RS15860 2f147451ecbb4dcccfaafff2aab26bed 458 SUPERFAMILY SSF143548 17 157 1.52E-45 T 22-04-2016 IPR029009 Allosteric substrate binding domain RPIC12D_RS15860 2f147451ecbb4dcccfaafff2aab26bed 458 Gene3D G3DSA:3.30.1330.90 11 157 7.8E-54 T 22-04-2016 IPR029009 Allosteric substrate binding domain RPIC12D_RS15860 2f147451ecbb4dcccfaafff2aab26bed 458 Pfam PF03315 Serine dehydratase beta chain 4 156 5.1E-58 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 RPIC12D_RS15860 2f147451ecbb4dcccfaafff2aab26bed 458 Pfam PF03313 Serine dehydratase alpha chain 188 452 8.1E-104 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit RPIC12D_RS15860 2f147451ecbb4dcccfaafff2aab26bed 458 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 455 7.7E-216 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 RPIC12D_RS15860 2f147451ecbb4dcccfaafff2aab26bed 458 PANTHER PTHR30182 1 456 1.4E-237 T 22-04-2016 RPIC12D_RS07590 86bea9b4cdc1faa612ac4be59f8b3920 94 Pfam PF05488 PAAR motif 9 85 3.4E-22 T 22-04-2016 IPR008727 PAAR motif RPIC12D_RS07590 86bea9b4cdc1faa612ac4be59f8b3920 94 PANTHER PTHR37465 1 85 8.1E-12 T 22-04-2016 RPIC12D_RS07590 86bea9b4cdc1faa612ac4be59f8b3920 94 PANTHER PTHR37465:SF1 1 85 8.1E-12 T 22-04-2016 RPIC12D_RS00490 df96ad124c413a742dbc4db6dfce2624 194 PANTHER PTHR10245 3 184 1.2E-45 T 22-04-2016 RPIC12D_RS00490 df96ad124c413a742dbc4db6dfce2624 194 SUPERFAMILY SSF47413 2 68 5.35E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS00490 df96ad124c413a742dbc4db6dfce2624 194 Gene3D G3DSA:2.60.120.10 75 183 4.7E-15 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS00490 df96ad124c413a742dbc4db6dfce2624 194 Gene3D G3DSA:1.10.260.40 2 72 4.8E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS00490 df96ad124c413a742dbc4db6dfce2624 194 PANTHER PTHR10245:SF21 3 184 1.2E-45 T 22-04-2016 RPIC12D_RS00490 df96ad124c413a742dbc4db6dfce2624 194 Pfam PF01381 Helix-turn-helix 11 63 7.9E-16 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC12D_RS00490 df96ad124c413a742dbc4db6dfce2624 194 SUPERFAMILY SSF51182 51 184 1.53E-20 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS00490 df96ad124c413a742dbc4db6dfce2624 194 SMART SM00530 10 65 5.6E-16 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC12D_RS03915 c7458093e881c09e58f16d01e6b6d70f 406 PIRSF PIRSF003085 6 406 3.4E-133 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 RPIC12D_RS03915 c7458093e881c09e58f16d01e6b6d70f 406 PANTHER PTHR10108:SF743 113 305 2.4E-115 T 22-04-2016 RPIC12D_RS03915 c7458093e881c09e58f16d01e6b6d70f 406 PANTHER PTHR10108:SF743 322 406 2.4E-115 T 22-04-2016 RPIC12D_RS03915 c7458093e881c09e58f16d01e6b6d70f 406 Pfam PF02353 Mycolic acid cyclopropane synthetase 115 384 1.9E-103 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS03915 c7458093e881c09e58f16d01e6b6d70f 406 SUPERFAMILY SSF53335 123 389 1.09E-78 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS03915 c7458093e881c09e58f16d01e6b6d70f 406 PANTHER PTHR10108 113 305 2.4E-115 T 22-04-2016 RPIC12D_RS03915 c7458093e881c09e58f16d01e6b6d70f 406 PANTHER PTHR10108 322 406 2.4E-115 T 22-04-2016 RPIC12D_RS03915 c7458093e881c09e58f16d01e6b6d70f 406 Gene3D G3DSA:3.40.50.150 113 388 2.6E-100 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS07435 a246536fd4f9909d6b29046bb03f9d37 467 PANTHER PTHR22935 142 461 3.1E-117 T 22-04-2016 RPIC12D_RS07435 a246536fd4f9909d6b29046bb03f9d37 467 SUPERFAMILY SSF56601 90 463 1.01E-98 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS07435 a246536fd4f9909d6b29046bb03f9d37 467 Gene3D G3DSA:3.40.710.10 147 440 6.7E-53 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS07435 a246536fd4f9909d6b29046bb03f9d37 467 Pfam PF00144 Beta-lactamase 157 447 3.7E-39 T 22-04-2016 IPR001466 Beta-lactamase-related RPIC12D_RS07435 a246536fd4f9909d6b29046bb03f9d37 467 PANTHER PTHR22935:SF2 142 461 3.1E-117 T 22-04-2016 RPIC12D_RS14870 2e16ef15562b91f4711e07ac4e6efecf 194 Pfam PF00467 KOW motif 143 176 3.0E-6 T 22-04-2016 IPR005824 KOW RPIC12D_RS14870 2e16ef15562b91f4711e07ac4e6efecf 194 ProSitePatterns PS01014 Transcription termination factor nusG signature. 177 186 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site RPIC12D_RS14870 2e16ef15562b91f4711e07ac4e6efecf 194 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 19 194 25.723 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RPIC12D_RS14870 2e16ef15562b91f4711e07ac4e6efecf 194 PANTHER PTHR30265 17 194 4.4E-81 T 22-04-2016 RPIC12D_RS14870 2e16ef15562b91f4711e07ac4e6efecf 194 PRINTS PR00338 Transcription termination factor NUSG signature 74 86 2.4E-19 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RPIC12D_RS14870 2e16ef15562b91f4711e07ac4e6efecf 194 PRINTS PR00338 Transcription termination factor NUSG signature 152 167 2.4E-19 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RPIC12D_RS14870 2e16ef15562b91f4711e07ac4e6efecf 194 PRINTS PR00338 Transcription termination factor NUSG signature 170 186 2.4E-19 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RPIC12D_RS14870 2e16ef15562b91f4711e07ac4e6efecf 194 Gene3D G3DSA:3.30.70.940 19 131 7.1E-46 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 RPIC12D_RS14870 2e16ef15562b91f4711e07ac4e6efecf 194 SMART SM00739 140 167 2.2E-5 T 22-04-2016 IPR005824 KOW RPIC12D_RS14870 2e16ef15562b91f4711e07ac4e6efecf 194 SUPERFAMILY SSF50104 138 194 1.86E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain RPIC12D_RS14870 2e16ef15562b91f4711e07ac4e6efecf 194 SUPERFAMILY SSF82679 19 130 1.83E-39 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 RPIC12D_RS14870 2e16ef15562b91f4711e07ac4e6efecf 194 Pfam PF02357 Transcription termination factor nusG 20 125 1.1E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 RPIC12D_RS14870 2e16ef15562b91f4711e07ac4e6efecf 194 SMART SM00738 19 128 1.6E-48 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 RPIC12D_RS14870 2e16ef15562b91f4711e07ac4e6efecf 194 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 22 194 3.4E-68 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RPIC12D_RS14870 2e16ef15562b91f4711e07ac4e6efecf 194 Gene3D G3DSA:2.30.30.30 133 194 1.1E-30 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 RPIC12D_RS13700 0ff1e94082a35f901e577c17b18ced32 365 Pfam PF10023 Putative aminopeptidase 26 348 1.5E-133 T 22-04-2016 IPR014553 Predicted aminopeptidase RPIC12D_RS13700 0ff1e94082a35f901e577c17b18ced32 365 PIRSF PIRSF029285 1 355 9.6E-162 T 22-04-2016 IPR014553 Predicted aminopeptidase RPIC12D_RS07680 ac4a927f2d185d35b291330d6c818016 202 Gene3D G3DSA:3.40.50.1110 17 197 2.1E-55 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain RPIC12D_RS07680 ac4a927f2d185d35b291330d6c818016 202 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 19 29 - T 22-04-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 RPIC12D_RS07680 ac4a927f2d185d35b291330d6c818016 202 PANTHER PTHR30383 1 199 2.1E-46 T 22-04-2016 RPIC12D_RS07680 ac4a927f2d185d35b291330d6c818016 202 SUPERFAMILY SSF52266 17 196 1.24E-48 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain RPIC12D_RS07680 ac4a927f2d185d35b291330d6c818016 202 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 21 179 6.3E-24 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain RPIC12D_RS12735 c042a85d9ddd9e169ed6eb670647ef0f 387 PANTHER PTHR31302 119 387 8.4E-81 T 22-04-2016 RPIC12D_RS12735 c042a85d9ddd9e169ed6eb670647ef0f 387 Pfam PF00149 Calcineurin-like phosphoesterase 159 327 4.5E-10 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RPIC12D_RS12735 c042a85d9ddd9e169ed6eb670647ef0f 387 PANTHER PTHR31302:SF7 119 387 8.4E-81 T 22-04-2016 RPIC12D_RS12735 c042a85d9ddd9e169ed6eb670647ef0f 387 SUPERFAMILY SSF56300 159 384 1.14E-38 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS12735 c042a85d9ddd9e169ed6eb670647ef0f 387 Gene3D G3DSA:3.60.21.10 159 335 4.9E-24 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS09570 7086bff4b42068d3ab06e4ba715d2948 513 SUPERFAMILY SSF110921 392 501 6.02E-27 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RPIC12D_RS09570 7086bff4b42068d3ab06e4ba715d2948 513 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RPIC12D_RS09570 7086bff4b42068d3ab06e4ba715d2948 513 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 511 42.144 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RPIC12D_RS09570 7086bff4b42068d3ab06e4ba715d2948 513 Pfam PF08502 LeuA allosteric (dimerisation) domain 371 501 2.7E-35 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RPIC12D_RS09570 7086bff4b42068d3ab06e4ba715d2948 513 SMART SM00917 371 502 1.2E-39 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RPIC12D_RS09570 7086bff4b42068d3ab06e4ba715d2948 513 PANTHER PTHR10277 1 510 3.1E-237 T 22-04-2016 RPIC12D_RS09570 7086bff4b42068d3ab06e4ba715d2948 513 SUPERFAMILY SSF51569 1 292 3.85E-95 T 22-04-2016 RPIC12D_RS09570 7086bff4b42068d3ab06e4ba715d2948 513 Pfam PF00682 HMGL-like 5 274 1.9E-98 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RPIC12D_RS09570 7086bff4b42068d3ab06e4ba715d2948 513 Gene3D G3DSA:3.20.20.70 1 348 1.5E-144 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS09570 7086bff4b42068d3ab06e4ba715d2948 513 PANTHER PTHR10277:SF9 1 510 3.1E-237 T 22-04-2016 RPIC12D_RS09570 7086bff4b42068d3ab06e4ba715d2948 513 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RPIC12D_RS09570 7086bff4b42068d3ab06e4ba715d2948 513 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 499 5.0E-212 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RPIC12D_RS08655 c8b1e04ec9cb6923dd283c13bf3d2973 343 PANTHER PTHR30570:SF0 1 331 3.3E-138 T 22-04-2016 RPIC12D_RS08655 c8b1e04ec9cb6923dd283c13bf3d2973 343 SUPERFAMILY SSF53850 25 331 1.33E-99 T 22-04-2016 RPIC12D_RS08655 c8b1e04ec9cb6923dd283c13bf3d2973 343 PIRSF PIRSF002756 3 334 3.2E-108 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RPIC12D_RS08655 c8b1e04ec9cb6923dd283c13bf3d2973 343 Gene3D G3DSA:3.40.190.10 177 333 1.4E-31 T 22-04-2016 RPIC12D_RS08655 c8b1e04ec9cb6923dd283c13bf3d2973 343 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 25 331 2.3E-131 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RPIC12D_RS08655 c8b1e04ec9cb6923dd283c13bf3d2973 343 Pfam PF12849 PBP superfamily domain 24 302 5.1E-60 T 22-04-2016 IPR024370 PBP domain RPIC12D_RS08655 c8b1e04ec9cb6923dd283c13bf3d2973 343 PANTHER PTHR30570 1 331 3.3E-138 T 22-04-2016 RPIC12D_RS08655 c8b1e04ec9cb6923dd283c13bf3d2973 343 Gene3D G3DSA:3.40.190.10 23 166 3.4E-56 T 22-04-2016 RPIC12D_RS17350 0b5b6a5d019d858c4626b9845da46df8 44 Pfam PF00468 Ribosomal protein L34 1 43 9.0E-23 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS17350 0b5b6a5d019d858c4626b9845da46df8 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 7.0E-16 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS17350 0b5b6a5d019d858c4626b9845da46df8 44 PANTHER PTHR14503 1 43 1.0E-18 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS17350 0b5b6a5d019d858c4626b9845da46df8 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS17350 0b5b6a5d019d858c4626b9845da46df8 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.76 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS17350 0b5b6a5d019d858c4626b9845da46df8 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 4.0E-24 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS15615 e5914dc6b7bac890d02487fc97be656e 112 Pfam PF07363 Protein of unknown function (DUF1484) 10 112 5.5E-30 T 22-04-2016 IPR009957 Protein of unknown function DUF1484 RPIC12D_RS06575 0e645740d06d263fe48c91bbffd7c56f 438 Gene3D G3DSA:1.20.1250.20 5 202 2.1E-12 T 22-04-2016 RPIC12D_RS06575 0e645740d06d263fe48c91bbffd7c56f 438 Pfam PF07690 Major Facilitator Superfamily 9 358 4.6E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS06575 0e645740d06d263fe48c91bbffd7c56f 438 PANTHER PTHR23513:SF8 334 431 2.5E-73 T 22-04-2016 RPIC12D_RS06575 0e645740d06d263fe48c91bbffd7c56f 438 PANTHER PTHR23513:SF8 1 317 2.5E-73 T 22-04-2016 RPIC12D_RS06575 0e645740d06d263fe48c91bbffd7c56f 438 PANTHER PTHR23513 334 431 2.5E-73 T 22-04-2016 RPIC12D_RS06575 0e645740d06d263fe48c91bbffd7c56f 438 PANTHER PTHR23513 1 317 2.5E-73 T 22-04-2016 RPIC12D_RS06575 0e645740d06d263fe48c91bbffd7c56f 438 SUPERFAMILY SSF103473 5 423 1.15E-22 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS15720 73f9a7ca220431d66106bee48bb676ac 243 PANTHER PTHR34183 96 212 5.3E-43 T 22-04-2016 RPIC12D_RS15720 73f9a7ca220431d66106bee48bb676ac 243 SUPERFAMILY SSF50685 106 194 2.2E-8 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RPIC12D_RS15720 73f9a7ca220431d66106bee48bb676ac 243 Pfam PF03330 Lytic transglycolase 105 193 2.7E-22 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RPIC12D_RS15720 73f9a7ca220431d66106bee48bb676ac 243 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 107 212 5.7E-38 T 22-04-2016 IPR012997 Rare lipoprotein A RPIC12D_RS15720 73f9a7ca220431d66106bee48bb676ac 243 PANTHER PTHR34183:SF2 96 212 5.3E-43 T 22-04-2016 RPIC12D_RS02315 9f26121a0f988577e3d9c984428179c1 167 PANTHER PTHR30093 4 72 9.1E-19 T 22-04-2016 RPIC12D_RS02315 9f26121a0f988577e3d9c984428179c1 167 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 34 1.1E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS02315 9f26121a0f988577e3d9c984428179c1 167 Pfam PF00114 Pilin (bacterial filament) 43 166 2.2E-13 T 22-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 RPIC12D_RS02315 9f26121a0f988577e3d9c984428179c1 167 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS02315 9f26121a0f988577e3d9c984428179c1 167 SUPERFAMILY SSF54523 14 144 2.98E-23 T 22-04-2016 RPIC12D_RS02315 9f26121a0f988577e3d9c984428179c1 167 Gene3D G3DSA:3.30.700.10 14 166 1.5E-33 T 22-04-2016 RPIC12D_RS02315 9f26121a0f988577e3d9c984428179c1 167 Pfam PF13633 Prokaryotic N-terminal methylation site 11 37 4.6E-13 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS04215 41bc12e9bb055ba6fbad4fdeb59a8793 371 Gene3D G3DSA:3.30.70.260 284 370 1.4E-29 T 22-04-2016 RPIC12D_RS04215 41bc12e9bb055ba6fbad4fdeb59a8793 371 Pfam PF01842 ACT domain 290 355 2.1E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RPIC12D_RS04215 41bc12e9bb055ba6fbad4fdeb59a8793 371 Gene3D G3DSA:3.40.190.10 190 267 4.4E-26 T 22-04-2016 RPIC12D_RS04215 41bc12e9bb055ba6fbad4fdeb59a8793 371 PANTHER PTHR21022 19 368 2.2E-124 T 22-04-2016 RPIC12D_RS04215 41bc12e9bb055ba6fbad4fdeb59a8793 371 TIGRFAM TIGR01807 CM_P2: chorismate mutase 20 93 4.6E-32 T 22-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 RPIC12D_RS04215 41bc12e9bb055ba6fbad4fdeb59a8793 371 PANTHER PTHR21022:SF0 19 368 2.2E-124 T 22-04-2016 RPIC12D_RS04215 41bc12e9bb055ba6fbad4fdeb59a8793 371 SUPERFAMILY SSF48600 19 106 2.9E-21 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RPIC12D_RS04215 41bc12e9bb055ba6fbad4fdeb59a8793 371 SUPERFAMILY SSF55021 274 369 2.02E-27 T 22-04-2016 RPIC12D_RS04215 41bc12e9bb055ba6fbad4fdeb59a8793 371 SMART SM00830 24 103 1.7E-28 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RPIC12D_RS04215 41bc12e9bb055ba6fbad4fdeb59a8793 371 Gene3D G3DSA:1.20.59.10 9 101 1.6E-24 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RPIC12D_RS04215 41bc12e9bb055ba6fbad4fdeb59a8793 371 Gene3D G3DSA:3.40.190.10 102 189 2.1E-32 T 22-04-2016 RPIC12D_RS04215 41bc12e9bb055ba6fbad4fdeb59a8793 371 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 255 277 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 RPIC12D_RS04215 41bc12e9bb055ba6fbad4fdeb59a8793 371 Pfam PF01817 Chorismate mutase type II 24 101 7.1E-24 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RPIC12D_RS04215 41bc12e9bb055ba6fbad4fdeb59a8793 371 Pfam PF00800 Prephenate dehydratase 105 279 1.7E-61 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 RPIC12D_RS04215 41bc12e9bb055ba6fbad4fdeb59a8793 371 PIRSF PIRSF001500 13 371 4.7E-149 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 RPIC12D_RS04215 41bc12e9bb055ba6fbad4fdeb59a8793 371 SUPERFAMILY SSF53850 104 287 1.52E-59 T 22-04-2016 RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 SUPERFAMILY SSF55874 705 854 1.7E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 SMART SM00091 361 428 6.5E-10 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 SMART SM00091 489 556 59.0 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 Pfam PF13188 PAS domain 490 542 0.006 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 PANTHER PTHR24423:SF505 606 855 2.0E-76 T 22-04-2016 RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 PANTHER PTHR24423:SF505 48 57 2.0E-76 T 22-04-2016 RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 PANTHER PTHR24423:SF505 359 475 2.0E-76 T 22-04-2016 RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 SMART SM00086 435 477 3.2E-7 T 22-04-2016 IPR001610 PAC motif RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 SUPERFAMILY SSF55785 474 605 1.36E-8 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 SUPERFAMILY SSF47384 622 697 4.12E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 743 856 1.0E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 Gene3D G3DSA:3.30.450.20 347 474 2.9E-24 T 22-04-2016 RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 Gene3D G3DSA:3.30.450.20 475 605 1.2E-8 T 22-04-2016 RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 Gene3D G3DSA:3.30.565.10 699 856 9.4E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 Pfam PF00989 PAS fold 362 474 1.6E-17 T 22-04-2016 IPR013767 PAS fold GO:0006355 RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 SMART SM00388 629 699 3.1E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 787 801 2.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 805 815 2.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 816 834 2.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 841 854 2.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 SUPERFAMILY SSF55785 348 475 7.33E-26 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 PANTHER PTHR24423 606 855 2.0E-76 T 22-04-2016 RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 PANTHER PTHR24423 48 57 2.0E-76 T 22-04-2016 RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 PANTHER PTHR24423 359 475 2.0E-76 T 22-04-2016 RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 SMART SM00387 741 857 6.9E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS08145 6050cdea976d2a0d049c2a60fa8b434c 858 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 361 484 1.7E-28 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS08205 076dcd99af61cb289dc10fa52efef1e7 250 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 36 239 2.7E-78 T 22-04-2016 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68|UniPathway: UPA00208|UniPathway: UPA00208 RPIC12D_RS08205 076dcd99af61cb289dc10fa52efef1e7 250 Gene3D G3DSA:3.90.850.10 37 242 2.0E-54 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC12D_RS08205 076dcd99af61cb289dc10fa52efef1e7 250 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 38 239 2.8E-47 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC12D_RS08205 076dcd99af61cb289dc10fa52efef1e7 250 PANTHER PTHR11820 30 237 1.1E-51 T 22-04-2016 RPIC12D_RS08205 076dcd99af61cb289dc10fa52efef1e7 250 PANTHER PTHR11820:SF8 30 237 1.1E-51 T 22-04-2016 RPIC12D_RS08205 076dcd99af61cb289dc10fa52efef1e7 250 SUPERFAMILY SSF56529 36 241 8.9E-54 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC12D_RS00870 52a2988fc7dcf03c64a339cdd0c19dd6 292 Pfam PF00005 ABC transporter 41 191 1.3E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS00870 52a2988fc7dcf03c64a339cdd0c19dd6 292 PANTHER PTHR24220 27 266 1.8E-111 T 22-04-2016 RPIC12D_RS00870 52a2988fc7dcf03c64a339cdd0c19dd6 292 SMART SM00382 50 239 8.0E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS00870 52a2988fc7dcf03c64a339cdd0c19dd6 292 Gene3D G3DSA:3.40.50.300 25 252 2.0E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS00870 52a2988fc7dcf03c64a339cdd0c19dd6 292 PANTHER PTHR24220:SF483 27 266 1.8E-111 T 22-04-2016 RPIC12D_RS00870 52a2988fc7dcf03c64a339cdd0c19dd6 292 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS00870 52a2988fc7dcf03c64a339cdd0c19dd6 292 SUPERFAMILY SSF52540 20 258 2.28E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 6.0E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 6.0E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 6.0E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 398 417 6.0E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 355 372 6.0E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 6.0E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 639 1.7E-121 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 PANTHER PTHR30009 1 421 8.9E-279 T 22-04-2016 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 PANTHER PTHR30009 471 659 8.9E-279 T 22-04-2016 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 9.0E-223 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 Pfam PF01578 Cytochrome C assembly protein 89 295 7.9E-51 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 PANTHER PTHR30009:SF0 1 421 8.9E-279 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 PANTHER PTHR30009:SF0 471 659 8.9E-279 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 8.0E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 8.0E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 8.0E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 8.0E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 8.0E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 8.0E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 8.0E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12245 fbce633c28a30fc58ed8e47396fd654c 672 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 8.0E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS09015 d2175d9aba86644244cfd9fd55e2d362 338 PANTHER PTHR30217:SF3 1 225 3.1E-146 T 22-04-2016 RPIC12D_RS09015 d2175d9aba86644244cfd9fd55e2d362 338 PANTHER PTHR30217:SF3 247 337 3.1E-146 T 22-04-2016 RPIC12D_RS09015 d2175d9aba86644244cfd9fd55e2d362 338 ProSitePatterns PS01276 Peptidase family U32 signature. 168 186 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC12D_RS09015 d2175d9aba86644244cfd9fd55e2d362 338 Pfam PF01136 Peptidase family U32 84 337 8.8E-66 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC12D_RS09015 d2175d9aba86644244cfd9fd55e2d362 338 PANTHER PTHR30217 1 225 3.1E-146 T 22-04-2016 RPIC12D_RS09015 d2175d9aba86644244cfd9fd55e2d362 338 PANTHER PTHR30217 247 337 3.1E-146 T 22-04-2016 RPIC12D_RS04415 0fafeb1a33a49a09e2aaa50158da169f 215 Gene3D G3DSA:3.40.980.10 18 208 7.1E-50 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS04415 0fafeb1a33a49a09e2aaa50158da169f 215 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 20 164 1.8E-33 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS04415 0fafeb1a33a49a09e2aaa50158da169f 215 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 83 96 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 RPIC12D_RS04415 0fafeb1a33a49a09e2aaa50158da169f 215 SUPERFAMILY SSF53218 18 206 2.09E-45 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS04415 0fafeb1a33a49a09e2aaa50158da169f 215 PANTHER PTHR10192 12 206 1.1E-74 T 22-04-2016 RPIC12D_RS04415 0fafeb1a33a49a09e2aaa50158da169f 215 Pfam PF00994 Probable molybdopterin binding domain 22 165 4.3E-29 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS04415 0fafeb1a33a49a09e2aaa50158da169f 215 SMART SM00852 21 171 2.3E-24 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS11610 d5d889c22285cf3aa92e464803602726 238 PANTHER PTHR24220:SF568 7 238 1.1E-122 T 22-04-2016 RPIC12D_RS11610 d5d889c22285cf3aa92e464803602726 238 PANTHER PTHR24220 7 238 1.1E-122 T 22-04-2016 RPIC12D_RS11610 d5d889c22285cf3aa92e464803602726 238 SUPERFAMILY SSF52540 5 236 8.38E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11610 d5d889c22285cf3aa92e464803602726 238 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS11610 d5d889c22285cf3aa92e464803602726 238 Gene3D G3DSA:3.40.50.300 3 235 4.7E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11610 d5d889c22285cf3aa92e464803602726 238 SMART SM00382 30 217 1.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS11610 d5d889c22285cf3aa92e464803602726 238 PIRSF PIRSF039137 1 238 5.5E-108 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 RPIC12D_RS11610 d5d889c22285cf3aa92e464803602726 238 Pfam PF00005 ABC transporter 22 166 1.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS09140 4333f09bec58847ef04e62b3a3d17a75 274 SUPERFAMILY SSF55120 1 255 9.78E-87 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS09140 4333f09bec58847ef04e62b3a3d17a75 274 Gene3D G3DSA:3.30.70.580 1 105 1.9E-36 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS09140 4333f09bec58847ef04e62b3a3d17a75 274 PANTHER PTHR11142 1 250 9.8E-90 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS09140 4333f09bec58847ef04e62b3a3d17a75 274 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 248 34.484 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS09140 4333f09bec58847ef04e62b3a3d17a75 274 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 243 9.1E-64 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS09140 4333f09bec58847ef04e62b3a3d17a75 274 Pfam PF01416 tRNA pseudouridine synthase 9 103 7.0E-9 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS09140 4333f09bec58847ef04e62b3a3d17a75 274 Pfam PF01416 tRNA pseudouridine synthase 147 249 6.9E-31 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS09140 4333f09bec58847ef04e62b3a3d17a75 274 Gene3D G3DSA:3.30.70.660 107 246 2.5E-43 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS09140 4333f09bec58847ef04e62b3a3d17a75 274 PIRSF PIRSF001430 1 260 1.2E-71 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS16020 b988194746328ba4949a78364b2b082f 261 PANTHER PTHR13696:SF52 1 261 4.1E-87 T 22-04-2016 RPIC12D_RS16020 b988194746328ba4949a78364b2b082f 261 Gene3D G3DSA:3.40.50.300 3 257 6.9E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16020 b988194746328ba4949a78364b2b082f 261 SUPERFAMILY SSF52540 1 255 2.66E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16020 b988194746328ba4949a78364b2b082f 261 Pfam PF13614 AAA domain 4 178 7.4E-62 T 22-04-2016 IPR025669 AAA domain RPIC12D_RS16020 b988194746328ba4949a78364b2b082f 261 PANTHER PTHR13696 1 261 4.1E-87 T 22-04-2016 RPIC12D_RS02205 c7b70880fcc9a3e6e5acb6655250eae5 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.2E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS02205 c7b70880fcc9a3e6e5acb6655250eae5 307 SUPERFAMILY SSF53850 91 301 6.52E-23 T 22-04-2016 RPIC12D_RS02205 c7b70880fcc9a3e6e5acb6655250eae5 307 SUPERFAMILY SSF46785 1 84 6.12E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS02205 c7b70880fcc9a3e6e5acb6655250eae5 307 Pfam PF03466 LysR substrate binding domain 91 296 7.2E-23 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS02205 c7b70880fcc9a3e6e5acb6655250eae5 307 PANTHER PTHR30126:SF2 1 298 1.5E-56 T 22-04-2016 RPIC12D_RS02205 c7b70880fcc9a3e6e5acb6655250eae5 307 PANTHER PTHR30126 1 298 1.5E-56 T 22-04-2016 RPIC12D_RS02205 c7b70880fcc9a3e6e5acb6655250eae5 307 Gene3D G3DSA:3.40.190.10 90 200 2.0E-13 T 22-04-2016 RPIC12D_RS02205 c7b70880fcc9a3e6e5acb6655250eae5 307 Gene3D G3DSA:1.10.10.10 1 83 7.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS02205 c7b70880fcc9a3e6e5acb6655250eae5 307 Gene3D G3DSA:3.40.190.10 201 261 3.0E-6 T 22-04-2016 RPIC12D_RS00790 501a8f268c89990afad0483813893377 377 Pfam PF11306 Protein of unknown function (DUF3108) 120 364 8.6E-24 T 22-04-2016 IPR021457 Protein of unknown function DUF3108 RPIC12D_RS16705 5757dadf162dd633d9d1970e7d0cbf23 249 Gene3D G3DSA:3.40.50.300 135 221 7.6E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16705 5757dadf162dd633d9d1970e7d0cbf23 249 SMART SM00382 39 214 2.9E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS16705 5757dadf162dd633d9d1970e7d0cbf23 249 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 148 204 9.9E-8 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS16705 5757dadf162dd633d9d1970e7d0cbf23 249 SUPERFAMILY SSF52540 35 221 7.81E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16705 5757dadf162dd633d9d1970e7d0cbf23 249 Pfam PF13476 AAA domain 35 85 1.5E-10 T 22-04-2016 RPIC12D_RS16705 5757dadf162dd633d9d1970e7d0cbf23 249 Gene3D G3DSA:3.40.50.300 35 84 8.9E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14080 d14d53e052936256e8b3a0af3a6eb3f1 213 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 34 213 1.2E-81 T 22-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 RPIC12D_RS14080 d14d53e052936256e8b3a0af3a6eb3f1 213 Gene3D G3DSA:1.20.120.80 32 211 6.4E-53 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 RPIC12D_RS14080 d14d53e052936256e8b3a0af3a6eb3f1 213 PANTHER PTHR11403 18 213 3.1E-107 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 RPIC12D_RS14080 d14d53e052936256e8b3a0af3a6eb3f1 213 PANTHER PTHR11403:SF2 18 213 3.1E-107 T 22-04-2016 RPIC12D_RS14080 d14d53e052936256e8b3a0af3a6eb3f1 213 SUPERFAMILY SSF81452 31 211 1.09E-57 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RPIC12D_RS14080 d14d53e052936256e8b3a0af3a6eb3f1 213 Pfam PF00510 Cytochrome c oxidase subunit III 26 211 3.4E-17 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 Gene3D G3DSA:1.10.150.20 721 826 4.3E-36 T 22-04-2016 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 664 686 8.0E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 854 870 8.0E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 739 752 8.0E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 687 702 8.0E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 709 732 8.0E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 800 811 8.0E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 822 833 8.0E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 884 897 8.0E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 763 788 8.0E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 PANTHER PTHR10133 321 936 0.0 T 22-04-2016 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 PANTHER PTHR10133 1 283 0.0 T 22-04-2016 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 SUPERFAMILY SSF56672 532 937 3.89E-157 T 22-04-2016 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 SUPERFAMILY SSF88723 5 169 7.29E-56 T 22-04-2016 IPR029060 PIN domain-like RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 SUPERFAMILY SSF47807 170 286 1.64E-30 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 ProSitePatterns PS00447 DNA polymerase family A signature. 763 782 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 SUPERFAMILY SSF53098 338 527 1.81E-50 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 Pfam PF01612 3'-5' exonuclease 335 525 3.7E-37 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 170 254 5.8E-23 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 Gene3D G3DSA:1.20.1060.10 552 671 3.3E-35 T 22-04-2016 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 Gene3D G3DSA:1.10.150.20 185 244 5.4E-24 T 22-04-2016 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 PANTHER PTHR10133:SF27 321 936 0.0 T 22-04-2016 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 PANTHER PTHR10133:SF27 1 283 0.0 T 22-04-2016 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 8 169 7.4E-53 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 TIGRFAM TIGR00593 pola: DNA polymerase I 8 937 1.2E-276 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 Gene3D G3DSA:3.30.70.370 672 720 1.0E-65 T 22-04-2016 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 Gene3D G3DSA:3.30.70.370 827 937 1.0E-65 T 22-04-2016 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 SMART SM00475 4 262 7.2E-111 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 SMART SM00474 335 526 6.6E-34 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 Gene3D G3DSA:3.30.420.10 333 551 2.2E-78 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 Gene3D G3DSA:3.40.50.1010 7 184 3.0E-69 T 22-04-2016 IPR029060 PIN domain-like RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 SMART SM00279 172 207 2.8E-12 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 Pfam PF00476 DNA polymerase family A 560 935 2.2E-151 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS10285 757e2875e8229919d738910d3b89bca0 937 SMART SM00482 695 901 6.3E-115 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS15235 ac0216bccbe72fbb34c9824b5aaf5220 163 SUPERFAMILY SSF51182 31 159 1.42E-22 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS15235 ac0216bccbe72fbb34c9824b5aaf5220 163 Gene3D G3DSA:2.60.120.10 36 159 8.0E-19 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS15235 ac0216bccbe72fbb34c9824b5aaf5220 163 Pfam PF14499 Domain of unknown function (DUF4437) 56 138 2.2E-6 T 22-04-2016 IPR028013 Protein of unknown function DUF4437 RPIC12D_RS02025 d14250b00e6e301df757ead34e1cfafb 500 Pfam PF13616 PPIC-type PPIASE domain 240 343 2.5E-20 T 22-04-2016 RPIC12D_RS02025 d14250b00e6e301df757ead34e1cfafb 500 Pfam PF13616 PPIC-type PPIASE domain 352 451 2.5E-24 T 22-04-2016 RPIC12D_RS02025 d14250b00e6e301df757ead34e1cfafb 500 PANTHER PTHR10657:SF16 87 495 1.9E-89 T 22-04-2016 RPIC12D_RS02025 d14250b00e6e301df757ead34e1cfafb 500 Pfam PF09312 SurA N-terminal domain 91 208 1.1E-39 T 22-04-2016 IPR015391 SurA N-terminal RPIC12D_RS02025 d14250b00e6e301df757ead34e1cfafb 500 SUPERFAMILY SSF54534 355 454 4.32E-31 T 22-04-2016 RPIC12D_RS02025 d14250b00e6e301df757ead34e1cfafb 500 SUPERFAMILY SSF54534 241 344 7.46E-26 T 22-04-2016 RPIC12D_RS02025 d14250b00e6e301df757ead34e1cfafb 500 SUPERFAMILY SSF109998 91 270 2.16E-43 T 22-04-2016 IPR027304 Trigger factor/SurA domain RPIC12D_RS02025 d14250b00e6e301df757ead34e1cfafb 500 PANTHER PTHR10657 87 495 1.9E-89 T 22-04-2016 RPIC12D_RS02025 d14250b00e6e301df757ead34e1cfafb 500 Gene3D G3DSA:3.10.50.40 238 352 5.0E-30 T 22-04-2016 RPIC12D_RS02025 d14250b00e6e301df757ead34e1cfafb 500 Gene3D G3DSA:3.10.50.40 354 475 1.5E-36 T 22-04-2016 RPIC12D_RS02025 d14250b00e6e301df757ead34e1cfafb 500 Hamap MF_01183 Chaperone SurA [surA]. 29 497 32.133 T 22-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 RPIC12D_RS02025 d14250b00e6e301df757ead34e1cfafb 500 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 391 411 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RPIC12D_RS16145 bd89aefa8c8214c1ced22e8b6f037c84 132 Gene3D G3DSA:1.10.10.60 15 99 4.7E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS16145 bd89aefa8c8214c1ced22e8b6f037c84 132 SUPERFAMILY SSF48295 6 60 3.4E-12 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RPIC12D_RS09835 bd89aefa8c8214c1ced22e8b6f037c84 132 Gene3D G3DSA:1.10.10.60 15 99 4.7E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS09835 bd89aefa8c8214c1ced22e8b6f037c84 132 SUPERFAMILY SSF48295 6 60 3.4E-12 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RPIC12D_RS14425 7d795f283a506b1ef3db57bc7634491b 229 Pfam PF01634 ATP phosphoribosyltransferase 60 214 8.7E-49 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RPIC12D_RS14425 7d795f283a506b1ef3db57bc7634491b 229 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RPIC12D_RS14425 7d795f283a506b1ef3db57bc7634491b 229 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 11 196 5.3E-59 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RPIC12D_RS14425 7d795f283a506b1ef3db57bc7634491b 229 Gene3D G3DSA:3.40.190.10 10 154 8.0E-44 T 22-04-2016 RPIC12D_RS14425 7d795f283a506b1ef3db57bc7634491b 229 PANTHER PTHR21403:SF3 8 218 2.6E-84 T 22-04-2016 RPIC12D_RS14425 7d795f283a506b1ef3db57bc7634491b 229 SUPERFAMILY SSF53850 10 217 3.91E-66 T 22-04-2016 RPIC12D_RS14425 7d795f283a506b1ef3db57bc7634491b 229 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 10 220 56.111 T 22-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RPIC12D_RS14425 7d795f283a506b1ef3db57bc7634491b 229 PANTHER PTHR21403 8 218 2.6E-84 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 SUPERFAMILY SSF55957 367 461 2.44E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 101 110 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 2.0E-27 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 171 190 1.4E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 205 218 1.4E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 100 114 1.4E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.4E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 PANTHER PTHR22573 1 461 1.9E-179 T 22-04-2016 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 Gene3D G3DSA:3.40.120.10 252 364 1.3E-42 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 Gene3D G3DSA:3.30.310.50 370 459 1.8E-26 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 SUPERFAMILY SSF53738 259 356 1.37E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 8 143 1.1E-35 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 365 1.8E-20 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 Gene3D G3DSA:3.40.120.10 4 164 9.0E-36 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 Gene3D G3DSA:3.40.120.10 173 250 6.5E-33 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 391 450 1.2E-11 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 SUPERFAMILY SSF53738 155 256 9.42E-33 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 PANTHER PTHR22573:SF28 1 461 1.9E-179 T 22-04-2016 RPIC12D_RS02985 770109eaab38c6a91c73ce291d799752 462 SUPERFAMILY SSF53738 4 178 9.42E-39 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC12D_RS07905 34b8ca8b9262a1209a1aaeae4104b38a 168 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 40 55 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS07905 34b8ca8b9262a1209a1aaeae4104b38a 168 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 7 160 2.6E-66 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS07905 34b8ca8b9262a1209a1aaeae4104b38a 168 Gene3D G3DSA:3.30.1330.50 4 161 2.8E-71 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS07905 34b8ca8b9262a1209a1aaeae4104b38a 168 PANTHER PTHR32125 3 167 4.9E-55 T 22-04-2016 RPIC12D_RS07905 34b8ca8b9262a1209a1aaeae4104b38a 168 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 6 161 36.106 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS07905 34b8ca8b9262a1209a1aaeae4104b38a 168 Pfam PF02542 YgbB family 6 159 3.1E-64 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS07905 34b8ca8b9262a1209a1aaeae4104b38a 168 SUPERFAMILY SSF69765 4 162 6.41E-66 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS02395 97e69419ae7df33e610e65ffcfee238d 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 7.1E-189 T 22-04-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC12D_RS02395 97e69419ae7df33e610e65ffcfee238d 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RPIC12D_RS02395 97e69419ae7df33e610e65ffcfee238d 354 Gene3D G3DSA:3.20.20.70 1 335 5.4E-112 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS02395 97e69419ae7df33e610e65ffcfee238d 354 SUPERFAMILY SSF51569 3 329 3.37E-108 T 22-04-2016 RPIC12D_RS02395 97e69419ae7df33e610e65ffcfee238d 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RPIC12D_RS02395 97e69419ae7df33e610e65ffcfee238d 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 328 1.9E-95 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RPIC12D_RS02395 97e69419ae7df33e610e65ffcfee238d 354 PANTHER PTHR30304 1 349 2.9E-121 T 22-04-2016 RPIC12D_RS02395 97e69419ae7df33e610e65ffcfee238d 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 4.3E-101 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RPIC12D_RS02395 97e69419ae7df33e610e65ffcfee238d 354 PIRSF PIRSF001359 1 329 2.5E-85 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RPIC12D_RS12400 eed81e563eed776bcc03722935ce65b2 237 SMART SM00866 95 232 1.3E-28 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RPIC12D_RS12400 eed81e563eed776bcc03722935ce65b2 237 Pfam PF07702 UTRA domain 95 232 2.1E-30 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RPIC12D_RS12400 eed81e563eed776bcc03722935ce65b2 237 Gene3D G3DSA:3.40.1410.10 92 228 3.2E-47 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RPIC12D_RS12400 eed81e563eed776bcc03722935ce65b2 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 2.7E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS12400 eed81e563eed776bcc03722935ce65b2 237 SMART SM00345 15 74 1.5E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS12400 eed81e563eed776bcc03722935ce65b2 237 Gene3D G3DSA:1.10.10.10 5 81 2.0E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12400 eed81e563eed776bcc03722935ce65b2 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.5E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS12400 eed81e563eed776bcc03722935ce65b2 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.5E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS12400 eed81e563eed776bcc03722935ce65b2 237 SUPERFAMILY SSF64288 64 234 6.12E-39 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RPIC12D_RS12400 eed81e563eed776bcc03722935ce65b2 237 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 10 237 6.6E-98 T 22-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 RPIC12D_RS12400 eed81e563eed776bcc03722935ce65b2 237 PANTHER PTHR11751:SF364 6 98 8.1E-33 T 22-04-2016 RPIC12D_RS12400 eed81e563eed776bcc03722935ce65b2 237 SUPERFAMILY SSF46785 4 78 5.67E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12400 eed81e563eed776bcc03722935ce65b2 237 PANTHER PTHR11751 6 98 8.1E-33 T 22-04-2016 RPIC12D_RS04705 beed99c098d63d6380cff7b956d918e9 694 PIRSF PIRSF015380 1 694 2.0E-272 T 22-04-2016 IPR011385 Site-specific recombinase Gcr RPIC12D_RS04705 beed99c098d63d6380cff7b956d918e9 694 Pfam PF10136 Site-specific recombinase 37 679 2.6E-232 T 22-04-2016 IPR011385 Site-specific recombinase Gcr RPIC12D_RS12110 bb19afd28ad0d3813db44db3f46f632a 338 Gene3D G3DSA:3.40.50.880 2 200 1.5E-13 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS12110 bb19afd28ad0d3813db44db3f46f632a 338 Gene3D G3DSA:1.10.10.60 282 330 2.8E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS12110 bb19afd28ad0d3813db44db3f46f632a 338 Pfam PF12833 Helix-turn-helix domain 250 328 1.4E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS12110 bb19afd28ad0d3813db44db3f46f632a 338 SUPERFAMILY SSF46689 280 330 3.94E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS12110 bb19afd28ad0d3813db44db3f46f632a 338 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 281 323 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS12110 bb19afd28ad0d3813db44db3f46f632a 338 SUPERFAMILY SSF52317 1 203 8.74E-17 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS12110 bb19afd28ad0d3813db44db3f46f632a 338 SMART SM00342 244 327 4.4E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS12110 bb19afd28ad0d3813db44db3f46f632a 338 PANTHER PTHR11019 102 335 3.3E-25 T 22-04-2016 RPIC12D_RS12110 bb19afd28ad0d3813db44db3f46f632a 338 Gene3D G3DSA:1.10.10.60 226 281 5.3E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS12110 bb19afd28ad0d3813db44db3f46f632a 338 SUPERFAMILY SSF46689 228 277 5.56E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS12110 bb19afd28ad0d3813db44db3f46f632a 338 PANTHER PTHR11019:SF68 102 335 3.3E-25 T 22-04-2016 RPIC12D_RS03060 8dedbd485673a9c3138b7ebeb6794035 321 Pfam PF01435 Peptidase family M48 83 285 6.4E-29 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RPIC12D_RS03060 8dedbd485673a9c3138b7ebeb6794035 321 PANTHER PTHR10120 20 287 9.6E-56 T 22-04-2016 RPIC12D_RS03060 8dedbd485673a9c3138b7ebeb6794035 321 Gene3D G3DSA:3.30.2010.10 76 163 9.6E-24 T 22-04-2016 RPIC12D_RS03060 8dedbd485673a9c3138b7ebeb6794035 321 PANTHER PTHR10120:SF19 20 287 9.6E-56 T 22-04-2016 RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 PRINTS PR00992 Alanine racemase signature 27 43 2.2E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 PRINTS PR00992 Alanine racemase signature 121 133 2.2E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 PRINTS PR00992 Alanine racemase signature 265 280 2.2E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 PRINTS PR00992 Alanine racemase signature 61 79 2.2E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 PRINTS PR00992 Alanine racemase signature 155 166 2.2E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 PRINTS PR00992 Alanine racemase signature 248 263 2.2E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 PRINTS PR00992 Alanine racemase signature 342 355 2.2E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 PRINTS PR00992 Alanine racemase signature 190 217 2.2E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 PANTHER PTHR30511:SF4 3 365 3.4E-127 T 22-04-2016 RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 TIGRFAM TIGR00492 alr: alanine racemase 4 357 2.3E-109 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 SUPERFAMILY SSF51419 9 233 7.07E-62 T 22-04-2016 IPR029066 PLP-binding barrel RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 Gene3D G3DSA:3.20.20.10 13 207 2.1E-66 T 22-04-2016 IPR029066 PLP-binding barrel RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 SMART SM01005 232 360 5.7E-67 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 Gene3D G3DSA:2.40.37.10 208 357 3.6E-52 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 Pfam PF00842 Alanine racemase, C-terminal domain 232 357 6.9E-38 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 Pfam PF01168 Alanine racemase, N-terminal domain 10 217 3.5E-67 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 PANTHER PTHR30511 3 365 3.4E-127 T 22-04-2016 RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 Hamap MF_01201 Alanine racemase. 2 360 33.396 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC12D_RS06580 65168a2402f108fc4a65e643b53b1df1 374 SUPERFAMILY SSF50621 227 357 2.41E-43 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RPIC12D_RS03945 6a51417c670e7c2a97a4fbb7195a90b5 300 Pfam PF00899 ThiF family 29 296 3.3E-34 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RPIC12D_RS03945 6a51417c670e7c2a97a4fbb7195a90b5 300 PANTHER PTHR10953 258 298 1.9E-88 T 22-04-2016 RPIC12D_RS03945 6a51417c670e7c2a97a4fbb7195a90b5 300 PANTHER PTHR10953 208 225 1.9E-88 T 22-04-2016 RPIC12D_RS03945 6a51417c670e7c2a97a4fbb7195a90b5 300 PANTHER PTHR10953 21 175 1.9E-88 T 22-04-2016 RPIC12D_RS03945 6a51417c670e7c2a97a4fbb7195a90b5 300 Gene3D G3DSA:3.40.50.720 265 299 4.2E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS03945 6a51417c670e7c2a97a4fbb7195a90b5 300 Gene3D G3DSA:3.40.50.720 14 233 4.2E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS03945 6a51417c670e7c2a97a4fbb7195a90b5 300 SUPERFAMILY SSF69572 16 299 2.22E-60 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RPIC12D_RS03945 6a51417c670e7c2a97a4fbb7195a90b5 300 PANTHER PTHR10953:SF159 258 298 1.9E-88 T 22-04-2016 RPIC12D_RS03945 6a51417c670e7c2a97a4fbb7195a90b5 300 PANTHER PTHR10953:SF159 208 225 1.9E-88 T 22-04-2016 RPIC12D_RS03945 6a51417c670e7c2a97a4fbb7195a90b5 300 PANTHER PTHR10953:SF159 21 175 1.9E-88 T 22-04-2016 RPIC12D_RS10650 a7d8009d79e0fc10ae6da8a8f0246dc1 257 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 170 256 1.9E-26 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC12D_RS10650 a7d8009d79e0fc10ae6da8a8f0246dc1 257 PANTHER PTHR11935:SF7 1 257 7.7E-94 T 22-04-2016 RPIC12D_RS10650 a7d8009d79e0fc10ae6da8a8f0246dc1 257 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 50 70 - T 22-04-2016 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 RPIC12D_RS10650 a7d8009d79e0fc10ae6da8a8f0246dc1 257 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 256 44.115 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC12D_RS10650 a7d8009d79e0fc10ae6da8a8f0246dc1 257 SMART SM00849 12 169 1.2E-34 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS10650 a7d8009d79e0fc10ae6da8a8f0246dc1 257 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 5 256 9.9E-102 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC12D_RS10650 a7d8009d79e0fc10ae6da8a8f0246dc1 257 PANTHER PTHR11935 1 257 7.7E-94 T 22-04-2016 RPIC12D_RS10650 a7d8009d79e0fc10ae6da8a8f0246dc1 257 PIRSF PIRSF005457 1 256 5.6E-101 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC12D_RS10650 a7d8009d79e0fc10ae6da8a8f0246dc1 257 Pfam PF00753 Metallo-beta-lactamase superfamily 14 169 6.7E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS10650 a7d8009d79e0fc10ae6da8a8f0246dc1 257 Gene3D G3DSA:3.60.15.10 5 256 1.1E-89 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS10650 a7d8009d79e0fc10ae6da8a8f0246dc1 257 SUPERFAMILY SSF56281 3 256 6.16E-69 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS11975 3b5fe633726a3fa331894ca23690ab1d 254 PANTHER PTHR18966 25 249 1.3E-50 T 22-04-2016 RPIC12D_RS11975 3b5fe633726a3fa331894ca23690ab1d 254 Gene3D G3DSA:3.40.190.10 34 110 9.4E-45 T 22-04-2016 RPIC12D_RS11975 3b5fe633726a3fa331894ca23690ab1d 254 Gene3D G3DSA:3.40.190.10 213 251 9.4E-45 T 22-04-2016 RPIC12D_RS11975 3b5fe633726a3fa331894ca23690ab1d 254 SMART SM00062 34 252 2.3E-74 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS11975 3b5fe633726a3fa331894ca23690ab1d 254 Gene3D G3DSA:3.40.190.10 111 212 1.3E-30 T 22-04-2016 RPIC12D_RS11975 3b5fe633726a3fa331894ca23690ab1d 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 250 3.8E-70 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS11975 3b5fe633726a3fa331894ca23690ab1d 254 PANTHER PTHR18966:SF152 25 249 1.3E-50 T 22-04-2016 RPIC12D_RS11975 3b5fe633726a3fa331894ca23690ab1d 254 SMART SM00079 34 251 2.1E-5 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 RPIC12D_RS11975 3b5fe633726a3fa331894ca23690ab1d 254 SUPERFAMILY SSF53850 12 251 2.85E-75 T 22-04-2016 RPIC12D_RS09795 d8f0e5f738371d74c95bb291009a96c8 161 SMART SM00257 110 159 2.0E-13 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS09795 d8f0e5f738371d74c95bb291009a96c8 161 SUPERFAMILY SSF54106 109 159 2.88E-8 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS09795 d8f0e5f738371d74c95bb291009a96c8 161 PANTHER PTHR34700 88 159 1.7E-25 T 22-04-2016 RPIC12D_RS09795 d8f0e5f738371d74c95bb291009a96c8 161 Pfam PF01476 LysM domain 111 159 1.6E-11 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS09795 d8f0e5f738371d74c95bb291009a96c8 161 Gene3D G3DSA:3.10.350.10 109 160 7.1E-12 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS09795 d8f0e5f738371d74c95bb291009a96c8 161 Pfam PF04972 BON domain 41 102 2.1E-9 T 22-04-2016 IPR007055 BON domain RPIC12D_RS11790 b79b5c93bdbd37dfad084d651716327f 153 Pfam PF02643 Uncharacterized ACR, COG1430 48 148 2.9E-33 T 22-04-2016 IPR003795 Protein of unknown function DUF192 RPIC12D_RS11790 b79b5c93bdbd37dfad084d651716327f 153 PANTHER PTHR37953 37 153 3.7E-28 T 22-04-2016 RPIC12D_RS11790 b79b5c93bdbd37dfad084d651716327f 153 PANTHER PTHR37953:SF1 37 153 3.7E-28 T 22-04-2016 RPIC12D_RS11970 b81e98c2617250d969a19a235efded1b 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 110 5.9E-30 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS11970 b81e98c2617250d969a19a235efded1b 222 Gene3D G3DSA:1.10.3720.10 12 216 3.1E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS11970 b81e98c2617250d969a19a235efded1b 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 216 1.6E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS11970 b81e98c2617250d969a19a235efded1b 222 SUPERFAMILY SSF161098 12 201 3.92E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS11970 b81e98c2617250d969a19a235efded1b 222 PANTHER PTHR30614 1 221 5.5E-95 T 22-04-2016 RPIC12D_RS19015 5a2cbd0d63c4c12696312d162ac8284d 202 SUPERFAMILY SSF56112 3 201 3.86E-21 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC12D_RS19015 5a2cbd0d63c4c12696312d162ac8284d 202 PANTHER PTHR10566:SF79 1 202 1.6E-115 T 22-04-2016 RPIC12D_RS19015 5a2cbd0d63c4c12696312d162ac8284d 202 Gene3D G3DSA:3.90.1200.10 24 97 2.1E-6 T 22-04-2016 RPIC12D_RS19015 5a2cbd0d63c4c12696312d162ac8284d 202 PANTHER PTHR10566 1 202 1.6E-115 T 22-04-2016 RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 PIRSF PIRSF036557 3 493 6.1E-235 T 22-04-2016 IPR012175 Xanthine dehydrogenase, small subunit, bacteria RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 Gene3D G3DSA:3.10.20.30 2 87 4.7E-26 T 22-04-2016 IPR012675 Beta-grasp domain RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 PANTHER PTHR11908 2 504 3.8E-120 T 22-04-2016 RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 Gene3D G3DSA:3.30.390.50 380 480 6.7E-38 T 22-04-2016 RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 Gene3D G3DSA:1.10.150.120 88 177 1.3E-35 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 PANTHER PTHR11908:SF66 2 504 3.8E-120 T 22-04-2016 RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 Gene3D G3DSA:3.30.43.10 207 256 1.2E-23 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 43 51 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 379 479 1.4E-31 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 61 1.7E-4 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 205 369 1.1E-46 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 SUPERFAMILY SSF56176 201 369 3.14E-48 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 SMART SM01092 379 480 4.0E-33 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 Pfam PF01799 [2Fe-2S] binding domain 86 162 3.8E-29 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 SUPERFAMILY SSF55447 377 483 1.96E-35 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 SUPERFAMILY SSF47741 98 198 3.79E-32 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 SUPERFAMILY SSF54292 5 90 6.79E-17 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 6 480 1.3E-211 T 22-04-2016 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 RPIC12D_RS09680 4cbdbdbd3332f326b828511fbe8474ed 504 Gene3D G3DSA:3.30.465.10 257 369 5.7E-32 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC12D_RS14640 1efcea213eda9565a48e67a85a0c23a4 133 SUPERFAMILY SSF53137 18 133 2.35E-47 T 22-04-2016 RPIC12D_RS14640 1efcea213eda9565a48e67a85a0c23a4 133 Gene3D G3DSA:3.30.420.80 10 133 3.6E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14640 1efcea213eda9565a48e67a85a0c23a4 133 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 14 130 2.0E-55 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14640 1efcea213eda9565a48e67a85a0c23a4 133 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 133 32.922 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14640 1efcea213eda9565a48e67a85a0c23a4 133 PANTHER PTHR11759 15 133 1.4E-69 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14640 1efcea213eda9565a48e67a85a0c23a4 133 PIRSF PIRSF002131 1 133 3.0E-52 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14640 1efcea213eda9565a48e67a85a0c23a4 133 Pfam PF00411 Ribosomal protein S11 23 132 3.8E-51 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14640 1efcea213eda9565a48e67a85a0c23a4 133 ProSitePatterns PS00054 Ribosomal protein S11 signature. 101 123 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site RPIC12D_RS13320 cd3c0f54813f4212e1a1e05002104be4 531 PANTHER PTHR30349 307 477 3.8E-33 T 22-04-2016 RPIC12D_RS13320 cd3c0f54813f4212e1a1e05002104be4 531 PANTHER PTHR30349:SF20 307 477 3.8E-33 T 22-04-2016 RPIC12D_RS13320 cd3c0f54813f4212e1a1e05002104be4 531 PANTHER PTHR30349:SF20 172 257 3.8E-33 T 22-04-2016 RPIC12D_RS13320 cd3c0f54813f4212e1a1e05002104be4 531 SUPERFAMILY SSF56349 315 451 4.41E-31 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC12D_RS13320 cd3c0f54813f4212e1a1e05002104be4 531 PANTHER PTHR30349 172 257 3.8E-33 T 22-04-2016 RPIC12D_RS13320 cd3c0f54813f4212e1a1e05002104be4 531 Pfam PF00589 Phage integrase family 317 447 2.3E-16 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS13320 cd3c0f54813f4212e1a1e05002104be4 531 SUPERFAMILY SSF56349 176 261 1.65E-10 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC12D_RS13320 cd3c0f54813f4212e1a1e05002104be4 531 Gene3D G3DSA:1.10.443.10 309 452 1.6E-28 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS13320 cd3c0f54813f4212e1a1e05002104be4 531 Gene3D G3DSA:1.10.443.10 244 260 1.6E-28 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS18480 c9b2be09a0a1c4d9c4760918f7fb5904 144 PANTHER PTHR10108:SF855 19 98 2.4E-16 T 22-04-2016 RPIC12D_RS18480 c9b2be09a0a1c4d9c4760918f7fb5904 144 PANTHER PTHR10108:SF855 116 144 2.4E-16 T 22-04-2016 RPIC12D_RS18480 c9b2be09a0a1c4d9c4760918f7fb5904 144 Pfam PF08241 Methyltransferase domain 58 144 4.3E-14 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RPIC12D_RS18480 c9b2be09a0a1c4d9c4760918f7fb5904 144 PANTHER PTHR10108 19 98 2.4E-16 T 22-04-2016 RPIC12D_RS18480 c9b2be09a0a1c4d9c4760918f7fb5904 144 PANTHER PTHR10108 116 144 2.4E-16 T 22-04-2016 RPIC12D_RS18480 c9b2be09a0a1c4d9c4760918f7fb5904 144 Gene3D G3DSA:3.40.50.150 20 144 1.1E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS18480 c9b2be09a0a1c4d9c4760918f7fb5904 144 SUPERFAMILY SSF53335 10 144 3.56E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS14965 172db92beef6cc57fce2e2b2285293ca 365 PANTHER PTHR24220 5 292 1.1E-89 T 22-04-2016 RPIC12D_RS14965 172db92beef6cc57fce2e2b2285293ca 365 Pfam PF08402 TOBE domain 284 353 5.6E-6 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RPIC12D_RS14965 172db92beef6cc57fce2e2b2285293ca 365 Gene3D G3DSA:3.40.50.300 4 240 1.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14965 172db92beef6cc57fce2e2b2285293ca 365 SMART SM00382 34 218 1.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS14965 172db92beef6cc57fce2e2b2285293ca 365 PANTHER PTHR24220:SF123 5 292 1.1E-89 T 22-04-2016 RPIC12D_RS14965 172db92beef6cc57fce2e2b2285293ca 365 SUPERFAMILY SSF50331 243 361 4.54E-16 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RPIC12D_RS14965 172db92beef6cc57fce2e2b2285293ca 365 Pfam PF00005 ABC transporter 25 168 2.7E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS14965 172db92beef6cc57fce2e2b2285293ca 365 SUPERFAMILY SSF52540 4 251 1.12E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13110 041478e63685813aafbfd74393b165db 174 Pfam PF08534 Redoxin 46 163 1.6E-20 T 22-04-2016 IPR013740 Redoxin GO:0016491 RPIC12D_RS13110 041478e63685813aafbfd74393b165db 174 SUPERFAMILY SSF52833 10 173 1.44E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS13110 041478e63685813aafbfd74393b165db 174 PANTHER PTHR10438:SF244 130 173 9.2E-19 T 22-04-2016 RPIC12D_RS13110 041478e63685813aafbfd74393b165db 174 PANTHER PTHR10438:SF244 57 102 9.2E-19 T 22-04-2016 RPIC12D_RS13110 041478e63685813aafbfd74393b165db 174 ProSitePatterns PS00194 Thioredoxin family active site. 66 84 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RPIC12D_RS13110 041478e63685813aafbfd74393b165db 174 PANTHER PTHR10438 130 173 9.2E-19 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC12D_RS13110 041478e63685813aafbfd74393b165db 174 PANTHER PTHR10438 57 102 9.2E-19 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC12D_RS13110 041478e63685813aafbfd74393b165db 174 Gene3D G3DSA:3.40.30.10 5 173 1.3E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS00600 c4bd6338ee7c98f8884c5eb5a487f228 309 Pfam PF00682 HMGL-like 7 279 2.3E-52 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RPIC12D_RS00600 c4bd6338ee7c98f8884c5eb5a487f228 309 PANTHER PTHR10277 2 296 1.4E-171 T 22-04-2016 RPIC12D_RS00600 c4bd6338ee7c98f8884c5eb5a487f228 309 PANTHER PTHR10277:SF40 2 296 1.4E-171 T 22-04-2016 RPIC12D_RS00600 c4bd6338ee7c98f8884c5eb5a487f228 309 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 233 242 - T 22-04-2016 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|UniPathway: UPA00896 RPIC12D_RS00600 c4bd6338ee7c98f8884c5eb5a487f228 309 Gene3D G3DSA:3.20.20.70 5 291 1.2E-87 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS00600 c4bd6338ee7c98f8884c5eb5a487f228 309 SUPERFAMILY SSF51569 1 292 1.06E-70 T 22-04-2016 RPIC12D_RS07155 26587bca1373723dd3155d7d649754c7 311 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 8 290 5.0E-135 T 22-04-2016 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1|UniPathway: UPA00157 RPIC12D_RS07155 26587bca1373723dd3155d7d649754c7 311 Pfam PF04444 Catechol dioxygenase N terminus 27 94 1.1E-20 T 22-04-2016 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 RPIC12D_RS07155 26587bca1373723dd3155d7d649754c7 311 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 136 164 - T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RPIC12D_RS07155 26587bca1373723dd3155d7d649754c7 311 PANTHER PTHR33711 1 307 2.3E-85 T 22-04-2016 RPIC12D_RS07155 26587bca1373723dd3155d7d649754c7 311 SUPERFAMILY SSF49482 4 292 1.7E-89 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RPIC12D_RS07155 26587bca1373723dd3155d7d649754c7 311 Gene3D G3DSA:2.60.130.10 2 308 1.3E-104 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RPIC12D_RS07155 26587bca1373723dd3155d7d649754c7 311 PANTHER PTHR33711:SF4 1 307 2.3E-85 T 22-04-2016 RPIC12D_RS07155 26587bca1373723dd3155d7d649754c7 311 Pfam PF00775 Dioxygenase 105 291 5.6E-60 T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RPIC12D_RS02210 fb3e04fd2e0d34bb98a5c0d77bfafe8a 444 PANTHER PTHR23508 16 436 1.5E-114 T 22-04-2016 RPIC12D_RS02210 fb3e04fd2e0d34bb98a5c0d77bfafe8a 444 SUPERFAMILY SSF103473 24 438 1.96E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS02210 fb3e04fd2e0d34bb98a5c0d77bfafe8a 444 Gene3D G3DSA:1.20.1250.20 256 436 5.5E-21 T 22-04-2016 RPIC12D_RS02210 fb3e04fd2e0d34bb98a5c0d77bfafe8a 444 Gene3D G3DSA:1.20.1250.20 26 227 5.3E-20 T 22-04-2016 RPIC12D_RS02210 fb3e04fd2e0d34bb98a5c0d77bfafe8a 444 PANTHER PTHR23508:SF1 16 436 1.5E-114 T 22-04-2016 RPIC12D_RS02210 fb3e04fd2e0d34bb98a5c0d77bfafe8a 444 Pfam PF00083 Sugar (and other) transporter 29 427 2.4E-17 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RPIC12D_RS00115 5cbf53080f33bb3de1e4acba9732c7db 303 SUPERFAMILY SSF88946 17 80 7.46E-14 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS00115 5cbf53080f33bb3de1e4acba9732c7db 303 PANTHER PTHR30173 20 299 6.2E-84 T 22-04-2016 RPIC12D_RS00115 5cbf53080f33bb3de1e4acba9732c7db 303 Gene3D G3DSA:1.10.10.10 120 174 1.6E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00115 5cbf53080f33bb3de1e4acba9732c7db 303 Gene3D G3DSA:3.10.450.50 184 297 5.1E-10 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS00115 5cbf53080f33bb3de1e4acba9732c7db 303 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 175 1.4E-18 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS00115 5cbf53080f33bb3de1e4acba9732c7db 303 Pfam PF08281 Sigma-70, region 4 122 170 7.0E-13 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS00115 5cbf53080f33bb3de1e4acba9732c7db 303 Pfam PF04542 Sigma-70 region 2 21 83 1.1E-15 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS00115 5cbf53080f33bb3de1e4acba9732c7db 303 SUPERFAMILY SSF88659 101 174 5.79E-12 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS00115 5cbf53080f33bb3de1e4acba9732c7db 303 PANTHER PTHR30173:SF25 20 299 6.2E-84 T 22-04-2016 RPIC12D_RS00115 5cbf53080f33bb3de1e4acba9732c7db 303 TIGRFAM TIGR02957 SigX4: RNA polymerase sigma-70 factor, TIGR02957 family 19 299 2.8E-101 T 22-04-2016 IPR014303 RNA polymerase sigma-70, ECF type RPIC12D_RS00115 5cbf53080f33bb3de1e4acba9732c7db 303 SUPERFAMILY SSF54427 183 297 7.03E-14 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS00115 5cbf53080f33bb3de1e4acba9732c7db 303 Gene3D G3DSA:1.10.1740.10 19 85 4.2E-14 T 22-04-2016 RPIC12D_RS12895 cab5967d3d74f89b584745bba2ce4e0c 218 PANTHER PTHR37482 16 182 3.0E-31 T 22-04-2016 RPIC12D_RS12895 cab5967d3d74f89b584745bba2ce4e0c 218 PANTHER PTHR37482:SF1 16 182 3.0E-31 T 22-04-2016 RPIC12D_RS12895 cab5967d3d74f89b584745bba2ce4e0c 218 Pfam PF04355 SmpA / OmlA family 60 130 8.0E-27 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 RPIC12D_RS12895 cab5967d3d74f89b584745bba2ce4e0c 218 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 22 143 27.893 T 22-04-2016 IPR026592 Outer membrane protein assembly factor BamE RPIC12D_RS06380 0942265221e05fb6ec0c546c95b586f9 725 Hamap MF_01906 D-(-)-3-hydroxybutyrate oligomer hydrolase. 3 725 34.15 T 22-04-2016 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22|UniPathway: UPA00863 RPIC12D_RS06380 0942265221e05fb6ec0c546c95b586f9 725 Gene3D G3DSA:3.40.50.1820 431 445 4.9E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS06380 0942265221e05fb6ec0c546c95b586f9 725 Gene3D G3DSA:3.40.50.1820 578 635 4.9E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS06380 0942265221e05fb6ec0c546c95b586f9 725 Gene3D G3DSA:3.40.50.1820 310 352 4.9E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS06380 0942265221e05fb6ec0c546c95b586f9 725 PIRSF PIRSF011409 1 725 0.0 T 22-04-2016 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22|UniPathway: UPA00863 RPIC12D_RS06380 0942265221e05fb6ec0c546c95b586f9 725 Pfam PF10605 3HB-oligomer hydrolase (3HBOH) 31 724 0.0 T 22-04-2016 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22|UniPathway: UPA00863 RPIC12D_RS17175 f0a88013d05ca33959af9b7bcdde7a2b 514 Gene3D G3DSA:1.20.1600.10 70 483 3.5E-119 T 22-04-2016 RPIC12D_RS17175 f0a88013d05ca33959af9b7bcdde7a2b 514 Pfam PF02321 Outer membrane efflux protein 297 478 3.2E-29 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC12D_RS17175 f0a88013d05ca33959af9b7bcdde7a2b 514 Pfam PF02321 Outer membrane efflux protein 80 269 2.9E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC12D_RS17175 f0a88013d05ca33959af9b7bcdde7a2b 514 PANTHER PTHR30203:SF15 1 499 9.3E-160 T 22-04-2016 RPIC12D_RS17175 f0a88013d05ca33959af9b7bcdde7a2b 514 PANTHER PTHR30203 1 499 9.3E-160 T 22-04-2016 RPIC12D_RS17175 f0a88013d05ca33959af9b7bcdde7a2b 514 SUPERFAMILY SSF56954 71 482 1.7E-116 T 22-04-2016 RPIC12D_RS17175 f0a88013d05ca33959af9b7bcdde7a2b 514 SUPERFAMILY SSF56954 3 38 1.7E-116 T 22-04-2016 RPIC12D_RS17175 f0a88013d05ca33959af9b7bcdde7a2b 514 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 480 1.8E-120 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RPIC12D_RS14315 6a0af3d7d85e88bc1e9def7f31e972ff 404 SUPERFAMILY SSF50156 250 374 2.23E-25 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS14315 6a0af3d7d85e88bc1e9def7f31e972ff 404 Gene3D G3DSA:2.30.42.10 293 388 6.4E-30 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS14315 6a0af3d7d85e88bc1e9def7f31e972ff 404 Gene3D G3DSA:2.40.10.10 61 179 1.1E-37 T 22-04-2016 RPIC12D_RS14315 6a0af3d7d85e88bc1e9def7f31e972ff 404 PANTHER PTHR22939:SF93 61 386 5.1E-136 T 22-04-2016 RPIC12D_RS14315 6a0af3d7d85e88bc1e9def7f31e972ff 404 SUPERFAMILY SSF50494 60 287 1.89E-66 T 22-04-2016 IPR009003 Peptidase S1, PA clan RPIC12D_RS14315 6a0af3d7d85e88bc1e9def7f31e972ff 404 PANTHER PTHR22939 61 386 5.1E-136 T 22-04-2016 RPIC12D_RS14315 6a0af3d7d85e88bc1e9def7f31e972ff 404 PRINTS PR00834 HtrA/DegQ protease family signature 188 212 5.2E-57 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS14315 6a0af3d7d85e88bc1e9def7f31e972ff 404 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 5.2E-57 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS14315 6a0af3d7d85e88bc1e9def7f31e972ff 404 PRINTS PR00834 HtrA/DegQ protease family signature 148 168 5.2E-57 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS14315 6a0af3d7d85e88bc1e9def7f31e972ff 404 PRINTS PR00834 HtrA/DegQ protease family signature 127 139 5.2E-57 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS14315 6a0af3d7d85e88bc1e9def7f31e972ff 404 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 5.2E-57 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS14315 6a0af3d7d85e88bc1e9def7f31e972ff 404 PRINTS PR00834 HtrA/DegQ protease family signature 245 262 5.2E-57 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC12D_RS14315 6a0af3d7d85e88bc1e9def7f31e972ff 404 Pfam PF13180 PDZ domain 291 380 4.4E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS14315 6a0af3d7d85e88bc1e9def7f31e972ff 404 Pfam PF13365 Trypsin-like peptidase domain 118 252 6.1E-35 T 22-04-2016 RPIC12D_RS14315 6a0af3d7d85e88bc1e9def7f31e972ff 404 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 62 386 2.2E-132 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 RPIC12D_RS14315 6a0af3d7d85e88bc1e9def7f31e972ff 404 SMART SM00228 291 373 2.6E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS14315 6a0af3d7d85e88bc1e9def7f31e972ff 404 Gene3D G3DSA:2.40.10.10 180 292 3.7E-43 T 22-04-2016 RPIC12D_RS09000 338807407ad896ca87c2af1d59729cb0 129 Pfam PF08859 DGC domain 8 110 1.1E-31 T 22-04-2016 IPR014958 DGC RPIC12D_RS09000 338807407ad896ca87c2af1d59729cb0 129 PIRSF PIRSF037181 1 129 3.5E-51 T 22-04-2016 IPR014958 DGC RPIC12D_RS08210 e937debb471dff906b0eafbd6a267619 96 SUPERFAMILY SSF160272 1 79 4.97E-13 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 RPIC12D_RS08210 e937debb471dff906b0eafbd6a267619 96 Pfam PF07369 Protein of unknown function (DUF1488) 3 75 1.4E-14 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 RPIC12D_RS08210 e937debb471dff906b0eafbd6a267619 96 Gene3D G3DSA:3.30.160.140 1 78 6.2E-11 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 RPIC12D_RS15450 932ad2c67a45be46f98f606d3dff59a3 456 PANTHER PTHR11785 11 441 6.8E-31 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC12D_RS15450 932ad2c67a45be46f98f606d3dff59a3 456 PIRSF PIRSF006060 1 455 2.3E-55 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC12D_RS15450 932ad2c67a45be46f98f606d3dff59a3 456 Pfam PF13520 Amino acid permease 26 421 5.8E-32 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC12D_RS10020 1b316a1055655cb3369dcfca4ad983e7 520 Gene3D G3DSA:3.40.50.300 4 108 8.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10020 1b316a1055655cb3369dcfca4ad983e7 520 Gene3D G3DSA:3.40.50.300 204 381 8.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10020 1b316a1055655cb3369dcfca4ad983e7 520 SUPERFAMILY SSF52540 4 370 1.28E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10020 1b316a1055655cb3369dcfca4ad983e7 520 PANTHER PTHR30121:SF3 18 440 6.7E-169 T 22-04-2016 RPIC12D_RS10020 1b316a1055655cb3369dcfca4ad983e7 520 PANTHER PTHR30121 18 440 6.7E-169 T 22-04-2016 RPIC12D_RS10020 1b316a1055655cb3369dcfca4ad983e7 520 Pfam PF05872 Bacterial protein of unknown function (DUF853) 5 519 5.1E-247 T 22-04-2016 IPR033186 Helicase HerA-like C-terminal RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 SUPERFAMILY SSF55424 355 476 4.3E-41 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 Gene3D G3DSA:3.50.50.60 2 152 2.6E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PANTHER PTHR22912 1 129 3.2E-227 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PANTHER PTHR22912 147 471 3.2E-227 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 340 3.7E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PIRSF PIRSF000350 1 477 6.5E-85 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 188 206 4.9E-41 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 4.9E-41 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 292 4.9E-41 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 305 327 4.9E-41 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.9E-41 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 359 467 2.7E-36 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 SUPERFAMILY SSF51905 1 350 2.11E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 478 3.3E-164 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 188 213 2.6E-77 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 320 327 2.6E-77 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.6E-77 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 291 2.6E-77 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 47 62 2.6E-77 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 442 462 2.6E-77 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 420 435 2.6E-77 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 161 2.6E-77 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 355 376 2.6E-77 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 48 58 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 Gene3D G3DSA:3.50.50.60 153 346 2.0E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PANTHER PTHR22912:SF131 1 129 3.2E-227 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 PANTHER PTHR22912:SF131 147 471 3.2E-227 T 22-04-2016 RPIC12D_RS05995 269a316d12a29238db27e12efad19d1b 478 Gene3D G3DSA:3.30.390.30 347 474 6.2E-49 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIC12D_RS12640 aec533f039d62fe947cfcd313aaf0ad1 301 Pfam PF05621 Bacterial TniB protein 26 279 5.3E-92 T 22-04-2016 IPR008868 Bacterial TniB RPIC12D_RS12640 aec533f039d62fe947cfcd313aaf0ad1 301 Gene3D G3DSA:3.40.50.300 44 213 5.0E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12640 aec533f039d62fe947cfcd313aaf0ad1 301 SUPERFAMILY SSF52540 38 281 4.16E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS02790 2c6fc51a48b189f4808c4856689223ed 165 SMART SM00448 40 153 3.1E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS02790 2c6fc51a48b189f4808c4856689223ed 165 Gene3D G3DSA:3.40.50.2300 38 161 3.9E-36 T 22-04-2016 RPIC12D_RS02790 2c6fc51a48b189f4808c4856689223ed 165 PANTHER PTHR26402:SF568 40 157 2.3E-55 T 22-04-2016 RPIC12D_RS02790 2c6fc51a48b189f4808c4856689223ed 165 Pfam PF00072 Response regulator receiver domain 42 154 2.1E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS02790 2c6fc51a48b189f4808c4856689223ed 165 PANTHER PTHR26402 40 157 2.3E-55 T 22-04-2016 RPIC12D_RS02790 2c6fc51a48b189f4808c4856689223ed 165 SUPERFAMILY SSF52172 39 160 1.57E-37 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS16560 a307e2f3c945ddb489e7890aa2e27ffc 144 Gene3D G3DSA:3.40.50.620 1 143 8.1E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS16560 a307e2f3c945ddb489e7890aa2e27ffc 144 PRINTS PR01438 Universal stress protein signature 1 18 2.4E-16 T 22-04-2016 IPR006015 Universal stress protein A RPIC12D_RS16560 a307e2f3c945ddb489e7890aa2e27ffc 144 PRINTS PR01438 Universal stress protein signature 100 112 2.4E-16 T 22-04-2016 IPR006015 Universal stress protein A RPIC12D_RS16560 a307e2f3c945ddb489e7890aa2e27ffc 144 PRINTS PR01438 Universal stress protein signature 118 140 2.4E-16 T 22-04-2016 IPR006015 Universal stress protein A RPIC12D_RS16560 a307e2f3c945ddb489e7890aa2e27ffc 144 SUPERFAMILY SSF52402 1 141 1.67E-30 T 22-04-2016 RPIC12D_RS16560 a307e2f3c945ddb489e7890aa2e27ffc 144 Pfam PF00582 Universal stress protein family 2 140 1.7E-24 T 22-04-2016 IPR006016 UspA GO:0006950 RPIC12D_RS16560 a307e2f3c945ddb489e7890aa2e27ffc 144 PANTHER PTHR31964:SF42 1 144 8.7E-22 T 22-04-2016 RPIC12D_RS16560 a307e2f3c945ddb489e7890aa2e27ffc 144 PANTHER PTHR31964 1 144 8.7E-22 T 22-04-2016 RPIC12D_RS04990 82b9a5a6164947bc99693886ea7c385a 349 PANTHER PTHR30480:SF7 13 317 7.8E-98 T 22-04-2016 RPIC12D_RS04990 82b9a5a6164947bc99693886ea7c385a 349 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 12 347 48.962 T 22-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 RPIC12D_RS04990 82b9a5a6164947bc99693886ea7c385a 349 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 28 309 7.0E-68 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RPIC12D_RS04990 82b9a5a6164947bc99693886ea7c385a 349 PANTHER PTHR30480 13 317 7.8E-98 T 22-04-2016 RPIC12D_RS04990 82b9a5a6164947bc99693886ea7c385a 349 Gene3D G3DSA:3.20.20.300 12 298 9.3E-82 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RPIC12D_RS04990 82b9a5a6164947bc99693886ea7c385a 349 SUPERFAMILY SSF51445 12 297 1.58E-73 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RPIC12D_RS07340 a97900491c8ce4466cb6e574c1c54f29 267 Gene3D G3DSA:3.20.20.140 1 263 1.8E-89 T 22-04-2016 RPIC12D_RS07340 a97900491c8ce4466cb6e574c1c54f29 267 PIRSF PIRSF005902 1 265 2.0E-79 T 22-04-2016 IPR001130 TatD family GO:0016788 RPIC12D_RS07340 a97900491c8ce4466cb6e574c1c54f29 267 SUPERFAMILY SSF51556 1 263 9.09E-88 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC12D_RS07340 a97900491c8ce4466cb6e574c1c54f29 267 PANTHER PTHR10060:SF20 1 266 1.5E-121 T 22-04-2016 RPIC12D_RS07340 a97900491c8ce4466cb6e574c1c54f29 267 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 263 2.0E-83 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 RPIC12D_RS07340 a97900491c8ce4466cb6e574c1c54f29 267 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RPIC12D_RS07340 a97900491c8ce4466cb6e574c1c54f29 267 Pfam PF01026 TatD related DNase 3 263 4.8E-79 T 22-04-2016 IPR001130 TatD family GO:0016788 RPIC12D_RS07340 a97900491c8ce4466cb6e574c1c54f29 267 PANTHER PTHR10060 1 266 1.5E-121 T 22-04-2016 IPR001130 TatD family GO:0016788 RPIC12D_RS17145 10b97a4f1855a6b367ade9b350647f90 296 SUPERFAMILY SSF53213 1 283 1.44E-80 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RPIC12D_RS17145 10b97a4f1855a6b367ade9b350647f90 296 Gene3D G3DSA:3.40.830.10 2 283 2.1E-90 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RPIC12D_RS17145 10b97a4f1855a6b367ade9b350647f90 296 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 4 282 3.8E-72 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RPIC12D_RS17145 10b97a4f1855a6b367ade9b350647f90 296 PANTHER PTHR30096 1 286 5.6E-95 T 22-04-2016 RPIC12D_RS17145 10b97a4f1855a6b367ade9b350647f90 296 PIRSF PIRSF006157 1 284 7.8E-96 T 22-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 RPIC12D_RS09445 5ae371d8a16c158f6c91c3cfab91ed9f 203 Pfam PF00293 NUDIX domain 61 169 2.4E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC12D_RS09445 5ae371d8a16c158f6c91c3cfab91ed9f 203 PANTHER PTHR11839:SF9 31 190 5.7E-49 T 22-04-2016 RPIC12D_RS09445 5ae371d8a16c158f6c91c3cfab91ed9f 203 PANTHER PTHR11839 31 190 5.7E-49 T 22-04-2016 RPIC12D_RS09445 5ae371d8a16c158f6c91c3cfab91ed9f 203 Gene3D G3DSA:3.90.79.10 23 192 4.7E-52 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS09445 5ae371d8a16c158f6c91c3cfab91ed9f 203 SUPERFAMILY SSF55811 28 192 1.29E-45 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS06695 387d3c3e7565c0899797a801ee7cda27 348 SUPERFAMILY SSF53474 50 337 4.05E-62 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS06695 387d3c3e7565c0899797a801ee7cda27 348 PANTHER PTHR10992:SF771 301 338 1.6E-79 T 22-04-2016 RPIC12D_RS06695 387d3c3e7565c0899797a801ee7cda27 348 PANTHER PTHR10992:SF771 1 284 1.6E-79 T 22-04-2016 RPIC12D_RS06695 387d3c3e7565c0899797a801ee7cda27 348 PRINTS PR00412 Epoxide hydrolase signature 313 335 4.4E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC12D_RS06695 387d3c3e7565c0899797a801ee7cda27 348 PRINTS PR00412 Epoxide hydrolase signature 157 170 4.4E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC12D_RS06695 387d3c3e7565c0899797a801ee7cda27 348 PRINTS PR00412 Epoxide hydrolase signature 143 156 4.4E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC12D_RS06695 387d3c3e7565c0899797a801ee7cda27 348 PRINTS PR00412 Epoxide hydrolase signature 98 113 4.4E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC12D_RS06695 387d3c3e7565c0899797a801ee7cda27 348 Gene3D G3DSA:3.40.50.1820 36 336 2.3E-77 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS06695 387d3c3e7565c0899797a801ee7cda27 348 PANTHER PTHR10992 301 338 1.6E-79 T 22-04-2016 RPIC12D_RS06695 387d3c3e7565c0899797a801ee7cda27 348 PANTHER PTHR10992 1 284 1.6E-79 T 22-04-2016 RPIC12D_RS06695 387d3c3e7565c0899797a801ee7cda27 348 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 113 6.3E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS06695 387d3c3e7565c0899797a801ee7cda27 348 PRINTS PR00111 Alpha/beta hydrolase fold signature 157 170 6.3E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS06695 387d3c3e7565c0899797a801ee7cda27 348 PRINTS PR00111 Alpha/beta hydrolase fold signature 143 156 6.3E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS06695 387d3c3e7565c0899797a801ee7cda27 348 Pfam PF12697 Alpha/beta hydrolase family 75 330 1.3E-22 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS10825 2c7872d2babd80bcf57af9899da5f03d 221 Pfam PF01713 Smr domain 135 216 5.3E-26 T 22-04-2016 IPR002625 Smr domain RPIC12D_RS10825 2c7872d2babd80bcf57af9899da5f03d 221 PANTHER PTHR35562 27 216 2.7E-43 T 22-04-2016 RPIC12D_RS10825 2c7872d2babd80bcf57af9899da5f03d 221 SMART SM00463 132 216 6.9E-12 T 22-04-2016 IPR002625 Smr domain RPIC12D_RS10825 2c7872d2babd80bcf57af9899da5f03d 221 PANTHER PTHR35562:SF2 27 216 2.7E-43 T 22-04-2016 RPIC12D_RS10825 2c7872d2babd80bcf57af9899da5f03d 221 SUPERFAMILY SSF160443 133 216 4.58E-19 T 22-04-2016 IPR002625 Smr domain RPIC12D_RS07040 161d82c5b92844548de3d123edf53cdd 478 SUPERFAMILY SSF53720 4 471 4.19E-160 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS07040 161d82c5b92844548de3d123edf53cdd 478 Gene3D G3DSA:3.40.605.10 4 258 1.3E-90 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS07040 161d82c5b92844548de3d123edf53cdd 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS07040 161d82c5b92844548de3d123edf53cdd 478 PANTHER PTHR11699 1 473 1.5E-234 T 22-04-2016 RPIC12D_RS07040 161d82c5b92844548de3d123edf53cdd 478 Pfam PF00171 Aldehyde dehydrogenase family 13 469 3.6E-165 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS07040 161d82c5b92844548de3d123edf53cdd 478 Gene3D G3DSA:3.40.309.10 259 445 5.7E-64 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RPIC12D_RS07040 161d82c5b92844548de3d123edf53cdd 478 PANTHER PTHR11699:SF212 1 473 1.5E-234 T 22-04-2016 RPIC12D_RS16100 8f6321bc1a84b13c5a0d68d05127742e 402 Gene3D G3DSA:3.40.50.2300 159 302 1.9E-20 T 22-04-2016 RPIC12D_RS16100 8f6321bc1a84b13c5a0d68d05127742e 402 SUPERFAMILY SSF53822 31 400 1.11E-92 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS16100 8f6321bc1a84b13c5a0d68d05127742e 402 Gene3D G3DSA:3.40.50.2300 303 349 4.6E-33 T 22-04-2016 RPIC12D_RS16100 8f6321bc1a84b13c5a0d68d05127742e 402 Gene3D G3DSA:3.40.50.2300 27 154 4.6E-33 T 22-04-2016 RPIC12D_RS16100 8f6321bc1a84b13c5a0d68d05127742e 402 Pfam PF13458 Periplasmic binding protein 31 365 4.3E-91 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC12D_RS16100 8f6321bc1a84b13c5a0d68d05127742e 402 PANTHER PTHR30483:SF17 1 402 1.2E-190 T 22-04-2016 RPIC12D_RS16100 8f6321bc1a84b13c5a0d68d05127742e 402 PANTHER PTHR30483 1 402 1.2E-190 T 22-04-2016 RPIC12D_RS11855 be7edd4391c9444dc77bc57c69e3a07e 294 Pfam PF04228 Putative neutral zinc metallopeptidase 2 288 1.3E-122 T 22-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative RPIC12D_RS11855 be7edd4391c9444dc77bc57c69e3a07e 294 PANTHER PTHR30168 2 293 1.5E-130 T 22-04-2016 RPIC12D_RS06400 64ef927b841036286bbcbbd905e864ba 339 Pfam PF13531 Bacterial extracellular solute-binding protein 45 288 1.1E-46 T 22-04-2016 RPIC12D_RS06400 64ef927b841036286bbcbbd905e864ba 339 SUPERFAMILY SSF53850 28 336 7.14E-93 T 22-04-2016 RPIC12D_RS06400 64ef927b841036286bbcbbd905e864ba 339 PANTHER PTHR30368 26 339 1.8E-184 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 RPIC12D_RS06400 64ef927b841036286bbcbbd905e864ba 339 PANTHER PTHR30368:SF2 26 339 1.8E-184 T 22-04-2016 RPIC12D_RS06400 64ef927b841036286bbcbbd905e864ba 339 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 153 161 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 RPIC12D_RS06400 64ef927b841036286bbcbbd905e864ba 339 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 28 334 4.2E-153 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 RPIC12D_RS06400 64ef927b841036286bbcbbd905e864ba 339 Gene3D G3DSA:3.40.190.10 180 303 2.2E-30 T 22-04-2016 RPIC12D_RS06400 64ef927b841036286bbcbbd905e864ba 339 Gene3D G3DSA:3.40.190.10 29 173 3.0E-50 T 22-04-2016 RPIC12D_RS07430 6c7b6b31d752529f8f86ed2658659a7e 336 SUPERFAMILY SSF51735 123 301 1.01E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS07430 6c7b6b31d752529f8f86ed2658659a7e 336 Pfam PF00107 Zinc-binding dehydrogenase 158 293 2.4E-22 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIC12D_RS07430 6c7b6b31d752529f8f86ed2658659a7e 336 SMART SM00829 18 333 4.9E-7 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIC12D_RS07430 6c7b6b31d752529f8f86ed2658659a7e 336 Gene3D G3DSA:3.90.180.10 2 140 3.0E-55 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS07430 6c7b6b31d752529f8f86ed2658659a7e 336 PANTHER PTHR11695 23 334 8.2E-125 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RPIC12D_RS07430 6c7b6b31d752529f8f86ed2658659a7e 336 PANTHER PTHR11695:SF528 23 334 8.2E-125 T 22-04-2016 RPIC12D_RS07430 6c7b6b31d752529f8f86ed2658659a7e 336 Gene3D G3DSA:3.40.50.720 141 303 2.2E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS07430 6c7b6b31d752529f8f86ed2658659a7e 336 SUPERFAMILY SSF50129 3 164 1.37E-45 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS07430 6c7b6b31d752529f8f86ed2658659a7e 336 Pfam PF16884 N-terminal domain of oxidoreductase 7 113 1.0E-43 T 22-04-2016 RPIC12D_RS15875 32b1a4c9e94794cadbccb8c1ca5f508f 171 SUPERFAMILY SSF55729 1 162 2.23E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS15875 32b1a4c9e94794cadbccb8c1ca5f508f 171 PANTHER PTHR23091:SF187 1 165 1.1E-70 T 22-04-2016 RPIC12D_RS15875 32b1a4c9e94794cadbccb8c1ca5f508f 171 PANTHER PTHR23091 1 165 1.1E-70 T 22-04-2016 RPIC12D_RS15875 32b1a4c9e94794cadbccb8c1ca5f508f 171 Pfam PF13302 Acetyltransferase (GNAT) domain 2 137 8.1E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC12D_RS15875 32b1a4c9e94794cadbccb8c1ca5f508f 171 Gene3D G3DSA:3.40.630.30 2 163 1.5E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS01565 83fbb8a8e4d516d2d5611932d479ab2a 405 PANTHER PTHR11712 97 398 9.8E-74 T 22-04-2016 RPIC12D_RS01565 83fbb8a8e4d516d2d5611932d479ab2a 405 SUPERFAMILY SSF53901 2 238 3.4E-40 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS01565 83fbb8a8e4d516d2d5611932d479ab2a 405 SMART SM00825 Beta-ketoacyl synthase 32 400 1.9E-10 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RPIC12D_RS01565 83fbb8a8e4d516d2d5611932d479ab2a 405 Gene3D G3DSA:3.40.47.10 3 239 1.9E-30 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS01565 83fbb8a8e4d516d2d5611932d479ab2a 405 SUPERFAMILY SSF53901 209 399 1.22E-50 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS01565 83fbb8a8e4d516d2d5611932d479ab2a 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 250 356 2.3E-29 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RPIC12D_RS01565 83fbb8a8e4d516d2d5611932d479ab2a 405 Gene3D G3DSA:3.40.47.10 255 398 6.9E-53 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS01565 83fbb8a8e4d516d2d5611932d479ab2a 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 94 238 5.2E-26 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RPIC12D_RS01565 83fbb8a8e4d516d2d5611932d479ab2a 405 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site RPIC12D_RS15970 c78457e072a09a06f1cda3865026cb1f 138 PANTHER PTHR13822 1 138 1.6E-42 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC12D_RS15970 c78457e072a09a06f1cda3865026cb1f 138 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 6.5E-44 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC12D_RS15970 c78457e072a09a06f1cda3865026cb1f 138 Gene3D G3DSA:1.20.5.440 90 131 8.4E-14 T 22-04-2016 RPIC12D_RS15970 c78457e072a09a06f1cda3865026cb1f 138 SUPERFAMILY SSF46604 87 135 6.54E-12 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain RPIC12D_RS15970 c78457e072a09a06f1cda3865026cb1f 138 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 6.0E-35 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC12D_RS15970 c78457e072a09a06f1cda3865026cb1f 138 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 2.8E-31 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC12D_RS15970 c78457e072a09a06f1cda3865026cb1f 138 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 131 8.5E-8 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain RPIC12D_RS15970 c78457e072a09a06f1cda3865026cb1f 138 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 21.655 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC12D_RS15970 c78457e072a09a06f1cda3865026cb1f 138 Gene3D G3DSA:2.60.15.10 1 88 2.5E-32 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC12D_RS15970 c78457e072a09a06f1cda3865026cb1f 138 SUPERFAMILY SSF51344 3 85 1.44E-25 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC12D_RS01940 a4a4511a21d485e3782c5a8e1d09d138 238 PANTHER PTHR34300:SF2 12 235 4.0E-53 T 22-04-2016 RPIC12D_RS01940 a4a4511a21d485e3782c5a8e1d09d138 238 PANTHER PTHR34300 12 235 4.0E-53 T 22-04-2016 RPIC12D_RS01940 a4a4511a21d485e3782c5a8e1d09d138 238 Pfam PF02592 Putative vitamin uptake transporter 52 211 1.9E-47 T 22-04-2016 IPR003744 Protein of unknown function DUF165 RPIC12D_RS01940 a4a4511a21d485e3782c5a8e1d09d138 238 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 19 218 9.3E-32 T 22-04-2016 IPR003744 Protein of unknown function DUF165 RPIC12D_RS05880 8bad65e3b93a10e72cedeba5fb0bfb5d 228 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 12 223 5.9E-64 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC12D_RS05880 8bad65e3b93a10e72cedeba5fb0bfb5d 228 SUPERFAMILY SSF75445 130 207 2.09E-22 T 22-04-2016 RPIC12D_RS05880 8bad65e3b93a10e72cedeba5fb0bfb5d 228 Gene3D G3DSA:3.40.50.1360 1 137 1.0E-51 T 22-04-2016 RPIC12D_RS05880 8bad65e3b93a10e72cedeba5fb0bfb5d 228 PANTHER PTHR11934 1 224 7.2E-106 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC12D_RS05880 8bad65e3b93a10e72cedeba5fb0bfb5d 228 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 226 32.503 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC12D_RS05880 8bad65e3b93a10e72cedeba5fb0bfb5d 228 SUPERFAMILY SSF100950 1 150 8.38E-42 T 22-04-2016 RPIC12D_RS05880 8bad65e3b93a10e72cedeba5fb0bfb5d 228 Gene3D G3DSA:3.30.70.260 138 194 5.2E-27 T 22-04-2016 RPIC12D_RS05880 8bad65e3b93a10e72cedeba5fb0bfb5d 228 PANTHER PTHR11934:SF11 1 224 7.2E-106 T 22-04-2016 RPIC12D_RS05880 8bad65e3b93a10e72cedeba5fb0bfb5d 228 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 53 221 2.1E-56 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC12D_RS10310 033f2636e51664573c33571b8ccbf7f2 786 Gene3D G3DSA:1.10.10.160 112 184 5.5E-20 T 22-04-2016 IPR013986 DExx box DNA helicase domain RPIC12D_RS10310 033f2636e51664573c33571b8ccbf7f2 786 SUPERFAMILY SSF52540 554 672 2.28E-173 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10310 033f2636e51664573c33571b8ccbf7f2 786 SUPERFAMILY SSF52540 1 514 2.28E-173 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10310 033f2636e51664573c33571b8ccbf7f2 786 PANTHER PTHR11070:SF7 560 674 4.0E-206 T 22-04-2016 RPIC12D_RS10310 033f2636e51664573c33571b8ccbf7f2 786 PANTHER PTHR11070:SF7 1 510 4.0E-206 T 22-04-2016 RPIC12D_RS10310 033f2636e51664573c33571b8ccbf7f2 786 PANTHER PTHR11070 560 674 4.0E-206 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC12D_RS10310 033f2636e51664573c33571b8ccbf7f2 786 PANTHER PTHR11070 1 510 4.0E-206 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC12D_RS10310 033f2636e51664573c33571b8ccbf7f2 786 Gene3D G3DSA:3.40.50.300 289 390 3.7E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10310 033f2636e51664573c33571b8ccbf7f2 786 Gene3D G3DSA:3.40.50.300 583 674 3.7E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10310 033f2636e51664573c33571b8ccbf7f2 786 Gene3D G3DSA:1.10.486.10 391 514 1.9E-43 T 22-04-2016 RPIC12D_RS10310 033f2636e51664573c33571b8ccbf7f2 786 Gene3D G3DSA:1.10.486.10 554 572 1.9E-43 T 22-04-2016 RPIC12D_RS10310 033f2636e51664573c33571b8ccbf7f2 786 Pfam PF13361 UvrD-like helicase C-terminal domain 280 647 4.2E-71 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIC12D_RS10310 033f2636e51664573c33571b8ccbf7f2 786 Gene3D G3DSA:3.40.50.300 185 288 3.9E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10310 033f2636e51664573c33571b8ccbf7f2 786 Gene3D G3DSA:3.40.50.300 2 108 3.9E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10310 033f2636e51664573c33571b8ccbf7f2 786 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 274 1.3E-74 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RPIC12D_RS08540 dcbc61d55b93154e5c96323b7a17e247 173 Pfam PF13412 Winged helix-turn-helix DNA-binding 23 70 2.2E-18 T 22-04-2016 RPIC12D_RS08540 dcbc61d55b93154e5c96323b7a17e247 173 PANTHER PTHR30154:SF28 15 173 1.3E-56 T 22-04-2016 RPIC12D_RS08540 dcbc61d55b93154e5c96323b7a17e247 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 50 4.1E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS08540 dcbc61d55b93154e5c96323b7a17e247 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 39 4.1E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS08540 dcbc61d55b93154e5c96323b7a17e247 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 50 69 4.1E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS08540 dcbc61d55b93154e5c96323b7a17e247 173 SUPERFAMILY SSF46785 22 81 2.02E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08540 dcbc61d55b93154e5c96323b7a17e247 173 Gene3D G3DSA:3.30.70.920 76 172 1.3E-26 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC12D_RS08540 dcbc61d55b93154e5c96323b7a17e247 173 ProSitePatterns PS00519 AsnC-type HTH domain signature. 41 67 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RPIC12D_RS08540 dcbc61d55b93154e5c96323b7a17e247 173 PANTHER PTHR30154 15 173 1.3E-56 T 22-04-2016 RPIC12D_RS08540 dcbc61d55b93154e5c96323b7a17e247 173 SMART SM00344 23 132 6.0E-45 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RPIC12D_RS08540 dcbc61d55b93154e5c96323b7a17e247 173 Pfam PF01037 Lrp/AsnC ligand binding domain 89 163 1.9E-20 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC12D_RS08540 dcbc61d55b93154e5c96323b7a17e247 173 Gene3D G3DSA:1.10.10.10 21 74 9.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08540 dcbc61d55b93154e5c96323b7a17e247 173 SUPERFAMILY SSF54909 84 172 8.85E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC12D_RS10605 82fe6db8afdf1da99249a560324a1bdc 315 Pfam PF00753 Metallo-beta-lactamase superfamily 54 241 6.8E-5 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS10605 82fe6db8afdf1da99249a560324a1bdc 315 SMART SM00849 57 241 2.0E-6 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS10605 82fe6db8afdf1da99249a560324a1bdc 315 SUPERFAMILY SSF56281 4 294 1.22E-48 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS10605 82fe6db8afdf1da99249a560324a1bdc 315 PANTHER PTHR11935 11 117 1.0E-16 T 22-04-2016 RPIC12D_RS10605 82fe6db8afdf1da99249a560324a1bdc 315 PANTHER PTHR11935 137 259 1.0E-16 T 22-04-2016 RPIC12D_RS10605 82fe6db8afdf1da99249a560324a1bdc 315 PANTHER PTHR11935:SF95 11 117 1.0E-16 T 22-04-2016 RPIC12D_RS10605 82fe6db8afdf1da99249a560324a1bdc 315 PANTHER PTHR11935:SF95 137 259 1.0E-16 T 22-04-2016 RPIC12D_RS10605 82fe6db8afdf1da99249a560324a1bdc 315 TIGRFAM TIGR04558 SoxH_rel_PQQ_1: quinoprotein relay system zinc metallohydrolase 1 27 313 1.6E-117 T 22-04-2016 IPR030811 Quinoprotein relay system zinc metallohydrolase 1 RPIC12D_RS10605 82fe6db8afdf1da99249a560324a1bdc 315 Gene3D G3DSA:3.60.15.10 28 267 1.1E-33 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS03795 61c3e6df9e5a94a15fc7aead0910dc7d 390 Gene3D G3DSA:2.40.110.10 121 205 6.1E-20 T 22-04-2016 RPIC12D_RS03795 61c3e6df9e5a94a15fc7aead0910dc7d 390 PANTHER PTHR10909:SF275 14 389 2.5E-76 T 22-04-2016 RPIC12D_RS03795 61c3e6df9e5a94a15fc7aead0910dc7d 390 Gene3D G3DSA:1.10.540.10 12 106 5.7E-24 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS03795 61c3e6df9e5a94a15fc7aead0910dc7d 390 SUPERFAMILY SSF47203 230 379 4.99E-21 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS03795 61c3e6df9e5a94a15fc7aead0910dc7d 390 SUPERFAMILY SSF56645 17 210 9.16E-44 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC12D_RS03795 61c3e6df9e5a94a15fc7aead0910dc7d 390 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 235 365 2.3E-18 T 22-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain RPIC12D_RS03795 61c3e6df9e5a94a15fc7aead0910dc7d 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 18 109 8.8E-13 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS03795 61c3e6df9e5a94a15fc7aead0910dc7d 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 201 1.1E-10 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC12D_RS03795 61c3e6df9e5a94a15fc7aead0910dc7d 390 PANTHER PTHR10909 14 389 2.5E-76 T 22-04-2016 RPIC12D_RS03795 61c3e6df9e5a94a15fc7aead0910dc7d 390 Gene3D G3DSA:1.20.140.10 206 389 4.2E-56 T 22-04-2016 RPIC12D_RS03795 61c3e6df9e5a94a15fc7aead0910dc7d 390 PIRSF PIRSF016578 1 381 1.0E-35 T 22-04-2016 RPIC12D_RS07595 00984e56eaa02837e9de862e787f0c6c 327 PANTHER PTHR38033:SF1 47 306 1.0E-26 T 22-04-2016 RPIC12D_RS07595 00984e56eaa02837e9de862e787f0c6c 327 Pfam PF09850 Type VI secretion system protein DotU 83 288 4.2E-51 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU RPIC12D_RS07595 00984e56eaa02837e9de862e787f0c6c 327 PANTHER PTHR38033 47 306 1.0E-26 T 22-04-2016 RPIC12D_RS07595 00984e56eaa02837e9de862e787f0c6c 327 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 83 293 2.9E-51 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU RPIC12D_RS02125 63b4a98fc59fa815199ff48ea6619224 332 PRINTS PR00419 Adrenodoxin reductase family signature 28 41 4.7E-6 T 22-04-2016 RPIC12D_RS02125 63b4a98fc59fa815199ff48ea6619224 332 PRINTS PR00419 Adrenodoxin reductase family signature 5 27 4.7E-6 T 22-04-2016 RPIC12D_RS02125 63b4a98fc59fa815199ff48ea6619224 332 SUPERFAMILY SSF51905 295 331 7.03E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS02125 63b4a98fc59fa815199ff48ea6619224 332 SUPERFAMILY SSF51905 1 202 7.03E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS02125 63b4a98fc59fa815199ff48ea6619224 332 Gene3D G3DSA:3.50.50.60 292 331 7.5E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS02125 63b4a98fc59fa815199ff48ea6619224 332 Gene3D G3DSA:3.50.50.60 3 42 7.5E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS02125 63b4a98fc59fa815199ff48ea6619224 332 Gene3D G3DSA:3.50.50.60 116 192 7.5E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS02125 63b4a98fc59fa815199ff48ea6619224 332 Gene3D G3DSA:3.90.660.10 193 290 4.8E-47 T 22-04-2016 RPIC12D_RS02125 63b4a98fc59fa815199ff48ea6619224 332 Gene3D G3DSA:3.90.660.10 53 115 4.8E-47 T 22-04-2016 RPIC12D_RS02125 63b4a98fc59fa815199ff48ea6619224 332 PANTHER PTHR16128 3 332 1.7E-65 T 22-04-2016 RPIC12D_RS02125 63b4a98fc59fa815199ff48ea6619224 332 Pfam PF01593 Flavin containing amine oxidoreductase 109 283 3.5E-11 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 RPIC12D_RS02125 63b4a98fc59fa815199ff48ea6619224 332 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 72 2.8E-13 T 22-04-2016 RPIC12D_RS05455 879236b13b9ac0d4ae3aad1cb0fe468d 175 SUPERFAMILY SSF54534 2 141 7.66E-29 T 22-04-2016 RPIC12D_RS05455 879236b13b9ac0d4ae3aad1cb0fe468d 175 PANTHER PTHR10516:SF316 1 82 8.0E-18 T 22-04-2016 RPIC12D_RS05455 879236b13b9ac0d4ae3aad1cb0fe468d 175 PANTHER PTHR10516 130 168 8.0E-18 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RPIC12D_RS05455 879236b13b9ac0d4ae3aad1cb0fe468d 175 PANTHER PTHR10516 1 82 8.0E-18 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RPIC12D_RS05455 879236b13b9ac0d4ae3aad1cb0fe468d 175 PANTHER PTHR10516:SF316 130 168 8.0E-18 T 22-04-2016 RPIC12D_RS05455 879236b13b9ac0d4ae3aad1cb0fe468d 175 Gene3D G3DSA:3.10.50.40 3 68 9.4E-9 T 22-04-2016 RPIC12D_RS05455 879236b13b9ac0d4ae3aad1cb0fe468d 175 Gene3D G3DSA:3.10.50.40 123 143 9.4E-9 T 22-04-2016 RPIC12D_RS11170 0f1f1638214e8683182c61af937c0022 123 PANTHER PTHR33542 4 114 1.4E-16 T 22-04-2016 RPIC12D_RS11170 0f1f1638214e8683182c61af937c0022 123 Pfam PF01903 CbiX 11 114 1.5E-22 T 22-04-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377|UniPathway: UPA00148 RPIC12D_RS11170 0f1f1638214e8683182c61af937c0022 123 SUPERFAMILY SSF53800 5 119 3.92E-28 T 22-04-2016 RPIC12D_RS11170 0f1f1638214e8683182c61af937c0022 123 Gene3D G3DSA:3.40.50.1400 3 119 3.8E-32 T 22-04-2016 RPIC12D_RS19080 de520f38c55a1acf1ea1cb901d678ba2 330 SUPERFAMILY SSF48179 173 287 1.96E-21 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS19080 de520f38c55a1acf1ea1cb901d678ba2 330 Gene3D G3DSA:3.40.50.720 2 175 1.6E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS19080 de520f38c55a1acf1ea1cb901d678ba2 330 PANTHER PTHR23309 1 318 1.1E-87 T 22-04-2016 RPIC12D_RS19080 de520f38c55a1acf1ea1cb901d678ba2 330 PANTHER PTHR23309:SF2 1 318 1.1E-87 T 22-04-2016 RPIC12D_RS19080 de520f38c55a1acf1ea1cb901d678ba2 330 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 175 274 1.4E-13 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC12D_RS19080 de520f38c55a1acf1ea1cb901d678ba2 330 SUPERFAMILY SSF51735 2 173 2.39E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS19080 de520f38c55a1acf1ea1cb901d678ba2 330 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 1 172 7.5E-39 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC12D_RS19080 de520f38c55a1acf1ea1cb901d678ba2 330 Gene3D G3DSA:1.10.1040.10 176 275 9.7E-16 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC12D_RS19080 de520f38c55a1acf1ea1cb901d678ba2 330 PIRSF PIRSF000105 1 289 2.4E-48 T 22-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 RPIC12D_RS11780 161b6ea9f0ddc1860ae5669baaec126b 504 Gene3D G3DSA:3.60.21.10 159 463 5.1E-18 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS11780 161b6ea9f0ddc1860ae5669baaec126b 504 Pfam PF00149 Calcineurin-like phosphoesterase 162 406 2.9E-13 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RPIC12D_RS11780 161b6ea9f0ddc1860ae5669baaec126b 504 SUPERFAMILY SSF56300 159 488 1.24E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS05800 3a624050251068c55c7773c2040eb38c 211 Pfam PF09976 Tetratricopeptide repeat-like domain 15 209 5.4E-66 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain RPIC12D_RS05800 3a624050251068c55c7773c2040eb38c 211 PIRSF PIRSF006170 1 211 1.5E-59 T 22-04-2016 IPR026039 Uncharacterised protein family UPF0070 RPIC12D_RS05800 3a624050251068c55c7773c2040eb38c 211 PANTHER PTHR38035 2 210 2.5E-37 T 22-04-2016 RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 PIRSF PIRSF004557 1 435 4.9E-124 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 397 415 9.9E-94 T 22-04-2016 RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 9.9E-94 T 22-04-2016 RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 17 35 9.9E-94 T 22-04-2016 RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 145 170 9.9E-94 T 22-04-2016 RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 110 133 9.9E-94 T 22-04-2016 RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 69 89 9.9E-94 T 22-04-2016 RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 263 282 9.9E-94 T 22-04-2016 RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 171 194 9.9E-94 T 22-04-2016 RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 9.9E-94 T 22-04-2016 RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 ProSitePatterns PS00755 Protein secY signature 1. 70 89 - T 22-04-2016 IPR030659 SecY conserved site RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 Gene3D G3DSA:1.10.3370.10 3 432 8.9E-166 T 22-04-2016 IPR023201 SecY subunit domain RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 ProSitePatterns PS00756 Protein secY signature 2. 164 181 - T 22-04-2016 IPR030659 SecY conserved site RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 14 424 9.4E-129 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 Hamap MF_01465 Protein translocase subunit SecY [secY]. 4 428 29.425 T 22-04-2016 IPR026593 Protein translocase subunit SecY RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 PANTHER PTHR10906:SF2 1 440 2.4E-215 T 22-04-2016 RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 SUPERFAMILY SSF103491 4 419 3.01E-131 T 22-04-2016 IPR023201 SecY subunit domain RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 Pfam PF00344 SecY translocase 70 412 7.6E-116 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RPIC12D_RS14660 a978eb3b80aec53f687a7655e8536512 440 PANTHER PTHR10906 1 440 2.4E-215 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RPIC12D_RS10850 7ad30e3ebf65212fffbaa023bdbdb5ea 410 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 31 405 2.5E-153 T 22-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition RPIC12D_RS10850 7ad30e3ebf65212fffbaa023bdbdb5ea 410 Gene3D G3DSA:3.40.630.30 203 356 2.3E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS10850 7ad30e3ebf65212fffbaa023bdbdb5ea 410 SUPERFAMILY SSF55729 203 374 3.87E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS10850 7ad30e3ebf65212fffbaa023bdbdb5ea 410 PANTHER PTHR31384 64 332 8.6E-50 T 22-04-2016 RPIC12D_RS05695 e0f736c630d3188b4c7e84d1695cce3d 304 SUPERFAMILY SSF53850 93 300 1.97E-34 T 22-04-2016 RPIC12D_RS05695 e0f736c630d3188b4c7e84d1695cce3d 304 Gene3D G3DSA:1.10.10.10 7 91 4.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS05695 e0f736c630d3188b4c7e84d1695cce3d 304 PANTHER PTHR30419 1 297 1.0E-88 T 22-04-2016 RPIC12D_RS05695 e0f736c630d3188b4c7e84d1695cce3d 304 Gene3D G3DSA:3.40.190.10 93 180 2.7E-18 T 22-04-2016 RPIC12D_RS05695 e0f736c630d3188b4c7e84d1695cce3d 304 PANTHER PTHR30419:SF2 1 297 1.0E-88 T 22-04-2016 RPIC12D_RS05695 e0f736c630d3188b4c7e84d1695cce3d 304 Pfam PF03466 LysR substrate binding domain 92 298 2.2E-30 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS05695 e0f736c630d3188b4c7e84d1695cce3d 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 3.8E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS05695 e0f736c630d3188b4c7e84d1695cce3d 304 SUPERFAMILY SSF46785 5 115 6.53E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS05695 e0f736c630d3188b4c7e84d1695cce3d 304 Gene3D G3DSA:3.40.190.10 181 269 3.0E-20 T 22-04-2016 RPIC12D_RS09855 aa366944171087db718a5b0d183bbf50 67 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 60 16.321 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS09855 aa366944171087db718a5b0d183bbf50 67 Pfam PF01192 RNA polymerase Rpb6 8 58 1.4E-15 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS09855 aa366944171087db718a5b0d183bbf50 67 Gene3D G3DSA:3.90.940.10 1 64 9.2E-12 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS09855 aa366944171087db718a5b0d183bbf50 67 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 57 2.7E-17 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS09855 aa366944171087db718a5b0d183bbf50 67 SMART SM01409 8 59 2.5E-15 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS09855 aa366944171087db718a5b0d183bbf50 67 PANTHER PTHR34476 2 62 1.1E-15 T 22-04-2016 RPIC12D_RS09855 aa366944171087db718a5b0d183bbf50 67 SUPERFAMILY SSF63562 1 63 1.44E-20 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS10935 4d939745efe01eda2cb1693de5b6c364 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 187 1.6E-49 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 RPIC12D_RS10935 4d939745efe01eda2cb1693de5b6c364 188 SUPERFAMILY SSF51283 3 187 8.64E-53 T 22-04-2016 IPR029054 dUTPase-like RPIC12D_RS10935 4d939745efe01eda2cb1693de5b6c364 188 Gene3D G3DSA:2.70.40.10 3 187 5.8E-69 T 22-04-2016 IPR029054 dUTPase-like RPIC12D_RS10935 4d939745efe01eda2cb1693de5b6c364 188 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 188 28.358 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 RPIC12D_RS10935 4d939745efe01eda2cb1693de5b6c364 188 PANTHER PTHR11241 1 187 1.2E-76 T 22-04-2016 RPIC12D_RS10935 4d939745efe01eda2cb1693de5b6c364 188 Pfam PF00692 dUTPase 82 184 6.4E-6 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 RPIC12D_RS10935 4d939745efe01eda2cb1693de5b6c364 188 PANTHER PTHR11241:SF1 1 187 1.2E-76 T 22-04-2016 RPIC12D_RS11880 b45f098db256c0c8c3a9fc0ba33bfe41 436 Pfam PF13657 HipA N-terminal domain 2 70 2.1E-9 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 RPIC12D_RS11880 b45f098db256c0c8c3a9fc0ba33bfe41 436 Pfam PF07804 HipA-like C-terminal domain 254 381 1.1E-7 T 22-04-2016 IPR012893 HipA-like, C-terminal RPIC12D_RS11960 877a87d9a1950ef613aeebbf060c270b 315 Pfam PF00491 Arginase family 42 311 3.9E-62 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS11960 877a87d9a1950ef613aeebbf060c270b 315 SUPERFAMILY SSF52768 9 312 5.04E-81 T 22-04-2016 RPIC12D_RS11960 877a87d9a1950ef613aeebbf060c270b 315 ProSitePatterns PS01053 Arginase family signature. 242 263 - T 22-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 RPIC12D_RS11960 877a87d9a1950ef613aeebbf060c270b 315 Gene3D G3DSA:3.40.800.10 3 313 1.9E-100 T 22-04-2016 IPR023696 Ureohydrolase domain RPIC12D_RS11960 877a87d9a1950ef613aeebbf060c270b 315 PANTHER PTHR11358 1 314 1.2E-101 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS11960 877a87d9a1950ef613aeebbf060c270b 315 PIRSF PIRSF036979 27 314 4.8E-32 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS11960 877a87d9a1950ef613aeebbf060c270b 315 Hamap MF_00737 Formimidoylglutamase [hutG]. 5 313 42.201 T 22-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 RPIC12D_RS11960 877a87d9a1950ef613aeebbf060c270b 315 PRINTS PR00116 Arginase signature 239 268 3.1E-7 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS11960 877a87d9a1950ef613aeebbf060c270b 315 PRINTS PR00116 Arginase signature 274 288 3.1E-7 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS11960 877a87d9a1950ef613aeebbf060c270b 315 PRINTS PR00116 Arginase signature 120 135 3.1E-7 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS11960 877a87d9a1950ef613aeebbf060c270b 315 PANTHER PTHR11358:SF35 1 314 1.2E-101 T 22-04-2016 RPIC12D_RS11960 877a87d9a1950ef613aeebbf060c270b 315 TIGRFAM TIGR01227 hutG: formimidoylglutamase 10 312 4.4E-94 T 22-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 RPIC12D_RS08880 bc3f49d9e091cedff7d0cf0a158a6b31 333 PANTHER PTHR24220 7 17 1.4E-141 T 22-04-2016 RPIC12D_RS08880 bc3f49d9e091cedff7d0cf0a158a6b31 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 243 329 6.0E-28 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIC12D_RS08880 bc3f49d9e091cedff7d0cf0a158a6b31 333 Pfam PF00005 ABC transporter 43 193 7.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS08880 bc3f49d9e091cedff7d0cf0a158a6b31 333 PANTHER PTHR24220:SF336 7 17 1.4E-141 T 22-04-2016 RPIC12D_RS08880 bc3f49d9e091cedff7d0cf0a158a6b31 333 SMART SM00382 51 243 3.7E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS08880 bc3f49d9e091cedff7d0cf0a158a6b31 333 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS08880 bc3f49d9e091cedff7d0cf0a158a6b31 333 PANTHER PTHR24220:SF336 39 329 1.4E-141 T 22-04-2016 RPIC12D_RS08880 bc3f49d9e091cedff7d0cf0a158a6b31 333 Gene3D G3DSA:3.40.50.300 4 266 8.2E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08880 bc3f49d9e091cedff7d0cf0a158a6b31 333 PANTHER PTHR24220 39 329 1.4E-141 T 22-04-2016 RPIC12D_RS08880 bc3f49d9e091cedff7d0cf0a158a6b31 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 245 309 4.1E-19 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIC12D_RS08880 bc3f49d9e091cedff7d0cf0a158a6b31 333 SUPERFAMILY SSF52540 51 328 6.61E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS00140 de7c56ceea40b08cf9098f740e2dba16 293 Gene3D G3DSA:1.10.10.60 63 121 3.8E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS00140 de7c56ceea40b08cf9098f740e2dba16 293 SMART SM00342 26 110 2.7E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS00140 de7c56ceea40b08cf9098f740e2dba16 293 PANTHER PTHR40055:SF1 28 293 4.8E-48 T 22-04-2016 RPIC12D_RS00140 de7c56ceea40b08cf9098f740e2dba16 293 SUPERFAMILY SSF46689 62 116 1.16E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS00140 de7c56ceea40b08cf9098f740e2dba16 293 Gene3D G3DSA:1.10.10.60 6 62 1.1E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS00140 de7c56ceea40b08cf9098f740e2dba16 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 79 94 4.8E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RPIC12D_RS00140 de7c56ceea40b08cf9098f740e2dba16 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 94 110 4.8E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RPIC12D_RS00140 de7c56ceea40b08cf9098f740e2dba16 293 Pfam PF06445 GyrI-like small molecule binding domain 141 293 1.9E-32 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain RPIC12D_RS00140 de7c56ceea40b08cf9098f740e2dba16 293 Gene3D G3DSA:3.20.80.10 142 293 1.6E-37 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain RPIC12D_RS00140 de7c56ceea40b08cf9098f740e2dba16 293 SUPERFAMILY SSF46689 10 60 2.69E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS00140 de7c56ceea40b08cf9098f740e2dba16 293 SMART SM00871 140 293 2.0E-35 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding RPIC12D_RS00140 de7c56ceea40b08cf9098f740e2dba16 293 PANTHER PTHR40055 28 293 4.8E-48 T 22-04-2016 RPIC12D_RS00140 de7c56ceea40b08cf9098f740e2dba16 293 Pfam PF12833 Helix-turn-helix domain 32 111 1.3E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS00140 de7c56ceea40b08cf9098f740e2dba16 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 63 106 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS00140 de7c56ceea40b08cf9098f740e2dba16 293 SUPERFAMILY SSF55136 142 293 5.06E-32 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain RPIC12D_RS06970 1a93be75ce9c04973201c2b4918f4082 387 PANTHER PTHR23518 1 383 1.0E-110 T 22-04-2016 RPIC12D_RS06970 1a93be75ce9c04973201c2b4918f4082 387 Pfam PF07690 Major Facilitator Superfamily 9 217 4.4E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS06970 1a93be75ce9c04973201c2b4918f4082 387 Pfam PF07690 Major Facilitator Superfamily 236 381 7.5E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS06970 1a93be75ce9c04973201c2b4918f4082 387 SUPERFAMILY SSF103473 5 382 1.07E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS06970 1a93be75ce9c04973201c2b4918f4082 387 PANTHER PTHR23518:SF2 1 383 1.0E-110 T 22-04-2016 RPIC12D_RS06970 1a93be75ce9c04973201c2b4918f4082 387 Gene3D G3DSA:1.20.1250.20 208 381 2.1E-23 T 22-04-2016 RPIC12D_RS06970 1a93be75ce9c04973201c2b4918f4082 387 Gene3D G3DSA:1.20.1250.20 5 187 6.9E-24 T 22-04-2016 RPIC12D_RS05540 60c109f52e118af3543c87180094cc0c 322 SUPERFAMILY SSF52096 5 316 7.09E-101 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS05540 60c109f52e118af3543c87180094cc0c 322 PANTHER PTHR22855:SF42 1 318 1.8E-124 T 22-04-2016 RPIC12D_RS05540 60c109f52e118af3543c87180094cc0c 322 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 148 7.0E-66 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS05540 60c109f52e118af3543c87180094cc0c 322 Gene3D G3DSA:3.90.226.10 57 272 8.2E-48 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS05540 60c109f52e118af3543c87180094cc0c 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 1.8E-45 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS05540 60c109f52e118af3543c87180094cc0c 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 1.8E-45 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS05540 60c109f52e118af3543c87180094cc0c 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 1.8E-45 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS05540 60c109f52e118af3543c87180094cc0c 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 1.8E-45 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS05540 60c109f52e118af3543c87180094cc0c 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 1.8E-45 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS05540 60c109f52e118af3543c87180094cc0c 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 1.8E-45 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS05540 60c109f52e118af3543c87180094cc0c 322 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 2.6E-149 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS05540 60c109f52e118af3543c87180094cc0c 322 PANTHER PTHR22855 1 318 1.8E-124 T 22-04-2016 RPIC12D_RS05540 60c109f52e118af3543c87180094cc0c 322 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 49.596 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC12D_RS01880 a1f1da61b078e97389b6703f8588f21d 344 PIRSF PIRSF001237 1 344 1.4E-140 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS01880 a1f1da61b078e97389b6703f8588f21d 344 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS01880 a1f1da61b078e97389b6703f8588f21d 344 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 5 342 8.4E-144 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS01880 a1f1da61b078e97389b6703f8588f21d 344 PANTHER PTHR11647 1 319 2.0E-167 T 22-04-2016 RPIC12D_RS01880 a1f1da61b078e97389b6703f8588f21d 344 ProSitePatterns PS00483 Dihydroorotase signature 2. 246 257 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS01880 a1f1da61b078e97389b6703f8588f21d 344 SUPERFAMILY SSF51556 3 342 4.09E-150 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC12D_RS01880 a1f1da61b078e97389b6703f8588f21d 344 Gene3D G3DSA:3.20.20.140 2 342 1.4E-138 T 22-04-2016 RPIC12D_RS01880 a1f1da61b078e97389b6703f8588f21d 344 Pfam PF01979 Amidohydrolase family 12 311 1.8E-21 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RPIC12D_RS01880 a1f1da61b078e97389b6703f8588f21d 344 Hamap MF_00219 Dihydroorotase [pyrC]. 3 344 44.066 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS01880 a1f1da61b078e97389b6703f8588f21d 344 PANTHER PTHR11647:SF59 1 319 2.0E-167 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS20300 e90b5b58872ad34fb089608b07b959b8 219 Gene3D G3DSA:1.10.8.60 1 41 3.2E-5 T 22-04-2016 RPIC12D_RS20300 e90b5b58872ad34fb089608b07b959b8 219 SUPERFAMILY SSF140990 39 219 2.35E-60 T 22-04-2016 RPIC12D_RS20300 e90b5b58872ad34fb089608b07b959b8 219 Pfam PF01434 Peptidase family M41 20 219 2.3E-65 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 RPIC12D_RS20300 e90b5b58872ad34fb089608b07b959b8 219 PANTHER PTHR23076 1 219 4.9E-86 T 22-04-2016 RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 Pfam PF01131 DNA topoisomerase 152 550 2.0E-102 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 Gene3D G3DSA:1.10.460.10 152 211 4.0E-40 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 Gene3D G3DSA:1.10.460.10 480 550 4.0E-40 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 1.5E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 1.5E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 519 533 1.5E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 96 109 1.5E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 1.5E-25 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 PANTHER PTHR11390 519 550 1.6E-143 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 PANTHER PTHR11390 1 501 1.6E-143 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 SMART SM00436 122 217 1.5E-33 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 Gene3D G3DSA:2.70.20.10 214 245 8.1E-35 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 Gene3D G3DSA:2.70.20.10 361 479 8.1E-35 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 Gene3D G3DSA:3.40.50.140 1 147 9.2E-46 T 22-04-2016 IPR006171 Toprim domain RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 SMART SM00493 1 122 5.8E-22 T 22-04-2016 IPR006171 Toprim domain RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 SMART SM00437 271 552 2.1E-58 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 SUPERFAMILY SSF56712 1 550 1.96E-164 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 Pfam PF01751 Toprim domain 3 129 1.9E-15 T 22-04-2016 IPR006171 Toprim domain RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 308 323 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 RPIC12D_RS03205 022de2ba8570b5476f50a4f625763d44 552 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 549 1.4E-195 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 RPIC12D_RS10615 3e9315324ffd9b0f11db843b0e02ac42 376 Gene3D G3DSA:2.40.160.10 28 376 6.3E-70 T 22-04-2016 IPR023614 Porin domain RPIC12D_RS10615 3e9315324ffd9b0f11db843b0e02ac42 376 Pfam PF13609 Gram-negative porin 15 337 3.7E-50 T 22-04-2016 RPIC12D_RS10615 3e9315324ffd9b0f11db843b0e02ac42 376 SUPERFAMILY SSF56935 28 376 2.62E-64 T 22-04-2016 RPIC12D_RS24845 6b07491f4718733f0b9ca6c2169c5d92 163 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 1 155 33.914 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC12D_RS24845 6b07491f4718733f0b9ca6c2169c5d92 163 Pfam PF01467 Cytidylyltransferase-like 2 130 1.3E-17 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIC12D_RS24845 6b07491f4718733f0b9ca6c2169c5d92 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 46 70 2.8E-38 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC12D_RS24845 6b07491f4718733f0b9ca6c2169c5d92 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 82 98 2.8E-38 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC12D_RS24845 6b07491f4718733f0b9ca6c2169c5d92 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 17 38 2.8E-38 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC12D_RS24845 6b07491f4718733f0b9ca6c2169c5d92 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 109 131 2.8E-38 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC12D_RS24845 6b07491f4718733f0b9ca6c2169c5d92 163 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 1 153 4.8E-56 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC12D_RS24845 6b07491f4718733f0b9ca6c2169c5d92 163 Gene3D G3DSA:3.40.50.620 1 154 2.3E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS24845 6b07491f4718733f0b9ca6c2169c5d92 163 SUPERFAMILY SSF52374 1 153 4.35E-45 T 22-04-2016 RPIC12D_RS24845 6b07491f4718733f0b9ca6c2169c5d92 163 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 1 55 9.2E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIC12D_RS24845 6b07491f4718733f0b9ca6c2169c5d92 163 PANTHER PTHR21342 1 153 1.5E-73 T 22-04-2016 RPIC12D_RS24845 6b07491f4718733f0b9ca6c2169c5d92 163 PANTHER PTHR21342:SF1 1 153 1.5E-73 T 22-04-2016 RPIC12D_RS04590 3e2449940da1fc9d69d3a842c08c081a 492 Gene3D G3DSA:3.40.640.10 163 384 1.9E-64 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS04590 3e2449940da1fc9d69d3a842c08c081a 492 Pfam PF00155 Aminotransferase class I and II 162 480 2.0E-31 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC12D_RS04590 3e2449940da1fc9d69d3a842c08c081a 492 Gene3D G3DSA:1.10.10.10 30 99 7.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS04590 3e2449940da1fc9d69d3a842c08c081a 492 PANTHER PTHR11751:SF386 110 484 1.8E-101 T 22-04-2016 RPIC12D_RS04590 3e2449940da1fc9d69d3a842c08c081a 492 PANTHER PTHR11751 110 484 1.8E-101 T 22-04-2016 RPIC12D_RS04590 3e2449940da1fc9d69d3a842c08c081a 492 SUPERFAMILY SSF46785 31 102 3.06E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS04590 3e2449940da1fc9d69d3a842c08c081a 492 SUPERFAMILY SSF53383 93 486 5.85E-76 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS04590 3e2449940da1fc9d69d3a842c08c081a 492 SMART SM00345 39 98 5.2E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS04590 3e2449940da1fc9d69d3a842c08c081a 492 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 72 88 2.0E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS04590 3e2449940da1fc9d69d3a842c08c081a 492 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 72 2.0E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS04590 3e2449940da1fc9d69d3a842c08c081a 492 Gene3D G3DSA:3.90.1150.10 385 477 5.7E-4 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS04590 3e2449940da1fc9d69d3a842c08c081a 492 Pfam PF00392 Bacterial regulatory proteins, gntR family 44 98 2.1E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS03015 8d64a9cb9b006b692107165cab514d17 216 PANTHER PTHR11579:SF0 1 169 2.7E-32 T 22-04-2016 RPIC12D_RS03015 8d64a9cb9b006b692107165cab514d17 216 PANTHER PTHR11579 1 169 2.7E-32 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RPIC12D_RS03015 8d64a9cb9b006b692107165cab514d17 216 SUPERFAMILY SSF53335 1 178 8.21E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS03015 8d64a9cb9b006b692107165cab514d17 216 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 10 206 2.3E-35 T 22-04-2016 RPIC12D_RS03015 8d64a9cb9b006b692107165cab514d17 216 Gene3D G3DSA:3.40.50.150 10 212 1.1E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS11390 d89a746e50ef94ea70258fc877de465d 512 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 353 499 3.1E-44 T 22-04-2016 IPR006517 Archaeophage PsiM2, terminase large subunit RPIC12D_RS11390 d89a746e50ef94ea70258fc877de465d 512 Pfam PF03237 Terminase-like family 173 495 1.4E-23 T 22-04-2016 IPR004921 Terminase, large subunit RPIC12D_RS11180 495b6123a59b8fb2e9c17766ac15e6df 269 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 15 29 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 RPIC12D_RS11180 495b6123a59b8fb2e9c17766ac15e6df 269 PANTHER PTHR21091 10 226 6.9E-59 T 22-04-2016 RPIC12D_RS11180 495b6123a59b8fb2e9c17766ac15e6df 269 PANTHER PTHR21091:SF16 10 226 6.9E-59 T 22-04-2016 RPIC12D_RS11180 495b6123a59b8fb2e9c17766ac15e6df 269 Gene3D G3DSA:3.40.1010.10 10 124 1.0E-40 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 RPIC12D_RS11180 495b6123a59b8fb2e9c17766ac15e6df 269 Gene3D G3DSA:3.30.950.10 125 258 4.5E-31 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RPIC12D_RS11180 495b6123a59b8fb2e9c17766ac15e6df 269 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 12 224 8.1E-44 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RPIC12D_RS11180 495b6123a59b8fb2e9c17766ac15e6df 269 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 89 122 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 RPIC12D_RS11180 495b6123a59b8fb2e9c17766ac15e6df 269 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 10 250 4.8E-88 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 RPIC12D_RS11180 495b6123a59b8fb2e9c17766ac15e6df 269 SUPERFAMILY SSF53790 6 251 3.79E-62 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RPIC12D_RS15805 f8e2f415ebc7229db827079d07c2b552 439 Gene3D G3DSA:3.40.50.10180 24 257 7.2E-100 T 22-04-2016 RPIC12D_RS15805 f8e2f415ebc7229db827079d07c2b552 439 PANTHER PTHR12227:SF0 2 437 3.0E-147 T 22-04-2016 RPIC12D_RS15805 f8e2f415ebc7229db827079d07c2b552 439 Pfam PF13660 Domain of unknown function (DUF4147) 25 247 7.6E-82 T 22-04-2016 IPR025286 MOFRL-associated domain RPIC12D_RS15805 f8e2f415ebc7229db827079d07c2b552 439 Pfam PF05161 MOFRL family 326 431 3.7E-37 T 22-04-2016 IPR007835 MOFRL domain RPIC12D_RS15805 f8e2f415ebc7229db827079d07c2b552 439 Gene3D G3DSA:3.40.1480.10 258 438 6.7E-74 T 22-04-2016 IPR007835 MOFRL domain RPIC12D_RS15805 f8e2f415ebc7229db827079d07c2b552 439 SUPERFAMILY SSF82544 20 437 2.75E-154 T 22-04-2016 RPIC12D_RS15805 f8e2f415ebc7229db827079d07c2b552 439 PANTHER PTHR12227 2 437 3.0E-147 T 22-04-2016 RPIC12D_RS14330 a10e5f701222245a58a31bbbf41613f8 380 Pfam PF13531 Bacterial extracellular solute-binding protein 62 321 1.1E-12 T 22-04-2016 RPIC12D_RS14330 a10e5f701222245a58a31bbbf41613f8 380 Gene3D G3DSA:3.40.190.10 9 159 7.1E-58 T 22-04-2016 RPIC12D_RS14330 a10e5f701222245a58a31bbbf41613f8 380 Gene3D G3DSA:3.40.190.10 301 374 7.1E-58 T 22-04-2016 RPIC12D_RS14330 a10e5f701222245a58a31bbbf41613f8 380 Gene3D G3DSA:3.40.190.10 160 300 1.3E-52 T 22-04-2016 RPIC12D_RS14330 a10e5f701222245a58a31bbbf41613f8 380 PANTHER PTHR30006 40 380 7.7E-70 T 22-04-2016 RPIC12D_RS14330 a10e5f701222245a58a31bbbf41613f8 380 PANTHER PTHR30006:SF10 40 380 7.7E-70 T 22-04-2016 RPIC12D_RS14330 a10e5f701222245a58a31bbbf41613f8 380 SUPERFAMILY SSF53850 59 374 2.72E-46 T 22-04-2016 RPIC12D_RS09980 22390f5471cd110413f3a42e40d10a8b 385 PANTHER PTHR34296 2 376 1.7E-127 T 22-04-2016 RPIC12D_RS09980 22390f5471cd110413f3a42e40d10a8b 385 Pfam PF02608 Basic membrane protein 55 340 1.8E-66 T 22-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 RPIC12D_RS09980 22390f5471cd110413f3a42e40d10a8b 385 Gene3D G3DSA:3.40.50.2300 212 284 3.3E-5 T 22-04-2016 RPIC12D_RS09980 22390f5471cd110413f3a42e40d10a8b 385 Gene3D G3DSA:3.40.50.2300 51 191 7.4E-47 T 22-04-2016 RPIC12D_RS09980 22390f5471cd110413f3a42e40d10a8b 385 SUPERFAMILY SSF53822 211 299 2.94E-5 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS09980 22390f5471cd110413f3a42e40d10a8b 385 PANTHER PTHR34296:SF1 2 376 1.7E-127 T 22-04-2016 RPIC12D_RS12805 12d26b89675500bab82df901cc2dc61c 370 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 4 357 1.1E-131 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RPIC12D_RS12805 12d26b89675500bab82df901cc2dc61c 370 Gene3D G3DSA:2.40.30.10 280 362 4.0E-29 T 22-04-2016 RPIC12D_RS12805 12d26b89675500bab82df901cc2dc61c 370 Gene3D G3DSA:3.40.50.620 2 208 3.0E-95 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS12805 12d26b89675500bab82df901cc2dc61c 370 Pfam PF03054 tRNA methyl transferase 4 357 2.6E-132 T 22-04-2016 RPIC12D_RS12805 12d26b89675500bab82df901cc2dc61c 370 PANTHER PTHR11933 1 360 6.8E-184 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RPIC12D_RS12805 12d26b89675500bab82df901cc2dc61c 370 SUPERFAMILY SSF52402 2 241 3.31E-56 T 22-04-2016 RPIC12D_RS12805 12d26b89675500bab82df901cc2dc61c 370 Gene3D G3DSA:2.30.30.280 210 278 3.3E-32 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 RPIC12D_RS12805 12d26b89675500bab82df901cc2dc61c 370 PANTHER PTHR11933:SF10 1 360 6.8E-184 T 22-04-2016 RPIC12D_RS12805 12d26b89675500bab82df901cc2dc61c 370 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 358 38.727 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RPIC12D_RS05475 c347232fd09b6b91a00dd58fedca3161 618 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 441 470 9.7E-57 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS05475 c347232fd09b6b91a00dd58fedca3161 618 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 287 316 9.7E-57 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS05475 c347232fd09b6b91a00dd58fedca3161 618 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 364 391 9.7E-57 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS05475 c347232fd09b6b91a00dd58fedca3161 618 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 422 9.7E-57 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS05475 c347232fd09b6b91a00dd58fedca3161 618 SMART SM00283 266 513 4.3E-89 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS05475 c347232fd09b6b91a00dd58fedca3161 618 SMART SM01049 33 127 4.3E-35 T 22-04-2016 IPR033480 Single Cache domain 2 RPIC12D_RS05475 c347232fd09b6b91a00dd58fedca3161 618 PANTHER PTHR32089 176 516 5.9E-145 T 22-04-2016 RPIC12D_RS05475 c347232fd09b6b91a00dd58fedca3161 618 Gene3D G3DSA:3.30.450.20 22 180 2.6E-48 T 22-04-2016 RPIC12D_RS05475 c347232fd09b6b91a00dd58fedca3161 618 Gene3D G3DSA:1.10.287.950 281 485 1.6E-61 T 22-04-2016 RPIC12D_RS05475 c347232fd09b6b91a00dd58fedca3161 618 Pfam PF17200 Single Cache domain 2 37 184 7.1E-42 T 22-04-2016 IPR033480 Single Cache domain 2 RPIC12D_RS05475 c347232fd09b6b91a00dd58fedca3161 618 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 318 512 7.6E-60 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS05475 c347232fd09b6b91a00dd58fedca3161 618 PANTHER PTHR32089:SF63 176 516 5.9E-145 T 22-04-2016 RPIC12D_RS05475 c347232fd09b6b91a00dd58fedca3161 618 SUPERFAMILY SSF58104 238 519 1.96E-71 T 22-04-2016 RPIC12D_RS02355 10ed7988fa393275e925dd16e9d4d440 146 Pfam PF13474 SnoaL-like domain 12 130 2.8E-21 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RPIC12D_RS02355 10ed7988fa393275e925dd16e9d4d440 146 SUPERFAMILY SSF54427 1 127 6.43E-21 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS02355 10ed7988fa393275e925dd16e9d4d440 146 Gene3D G3DSA:3.10.450.50 7 133 1.6E-13 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS06830 325a9c4e950067163ba7a7664512f7fd 298 Pfam PF10118 Predicted metal-dependent hydrolase 9 268 2.0E-72 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 RPIC12D_RS06830 325a9c4e950067163ba7a7664512f7fd 298 PANTHER PTHR39456:SF1 1 291 3.7E-121 T 22-04-2016 RPIC12D_RS06830 325a9c4e950067163ba7a7664512f7fd 298 PANTHER PTHR39456 1 291 3.7E-121 T 22-04-2016 RPIC12D_RS06830 325a9c4e950067163ba7a7664512f7fd 298 PIRSF PIRSF007580 1 288 1.1E-95 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 RPIC12D_RS01765 8ac80d5116770689c63d274564223b5b 245 PANTHER PTHR31876 12 226 6.7E-59 T 22-04-2016 RPIC12D_RS01765 8ac80d5116770689c63d274564223b5b 245 Pfam PF04367 Protein of unknown function (DUF502) 63 168 5.4E-37 T 22-04-2016 IPR007462 Protein of unknown function DUF502 RPIC12D_RS01765 8ac80d5116770689c63d274564223b5b 245 PANTHER PTHR31876:SF1 12 226 6.7E-59 T 22-04-2016 RPIC12D_RS01365 63a21919974d74ff2bb5e32ce3f1ffe3 200 SUPERFAMILY SSF53178 1 197 5.1E-66 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RPIC12D_RS01365 63a21919974d74ff2bb5e32ce3f1ffe3 200 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 190 36.76 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RPIC12D_RS01365 63a21919974d74ff2bb5e32ce3f1ffe3 200 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 197 3.4E-61 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RPIC12D_RS01365 63a21919974d74ff2bb5e32ce3f1ffe3 200 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 109 119 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RPIC12D_RS01365 63a21919974d74ff2bb5e32ce3f1ffe3 200 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 15 28 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RPIC12D_RS01365 63a21919974d74ff2bb5e32ce3f1ffe3 200 Pfam PF01195 Peptidyl-tRNA hydrolase 4 195 3.5E-56 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RPIC12D_RS01365 63a21919974d74ff2bb5e32ce3f1ffe3 200 PANTHER PTHR17224:SF1 2 200 1.8E-74 T 22-04-2016 RPIC12D_RS01365 63a21919974d74ff2bb5e32ce3f1ffe3 200 Gene3D G3DSA:3.40.50.1470 1 198 1.9E-70 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RPIC12D_RS01365 63a21919974d74ff2bb5e32ce3f1ffe3 200 PANTHER PTHR17224 2 200 1.8E-74 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RPIC12D_RS06165 b6ecaf90cff937b03bed41e8311fe039 305 SUPERFAMILY SSF53850 90 296 6.15E-46 T 22-04-2016 RPIC12D_RS06165 b6ecaf90cff937b03bed41e8311fe039 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.8E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06165 b6ecaf90cff937b03bed41e8311fe039 305 PANTHER PTHR30537 1 304 1.9E-112 T 22-04-2016 RPIC12D_RS06165 b6ecaf90cff937b03bed41e8311fe039 305 Gene3D G3DSA:3.40.190.10 92 175 2.6E-25 T 22-04-2016 RPIC12D_RS06165 b6ecaf90cff937b03bed41e8311fe039 305 PANTHER PTHR30537:SF5 1 304 1.9E-112 T 22-04-2016 RPIC12D_RS06165 b6ecaf90cff937b03bed41e8311fe039 305 Gene3D G3DSA:1.10.10.10 3 88 1.0E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06165 b6ecaf90cff937b03bed41e8311fe039 305 Gene3D G3DSA:3.40.190.10 176 260 9.0E-25 T 22-04-2016 RPIC12D_RS06165 b6ecaf90cff937b03bed41e8311fe039 305 SUPERFAMILY SSF46785 4 112 1.43E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06165 b6ecaf90cff937b03bed41e8311fe039 305 Pfam PF03466 LysR substrate binding domain 88 289 5.3E-43 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS08375 4e248406d5a3f10992d9d33fc86056e5 443 Pfam PF03631 Virulence factor BrkB 29 275 3.0E-53 T 22-04-2016 IPR017039 Virulence factor BrkB RPIC12D_RS08375 4e248406d5a3f10992d9d33fc86056e5 443 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 16 306 22.665 T 22-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial RPIC12D_RS08375 4e248406d5a3f10992d9d33fc86056e5 443 PANTHER PTHR30213 9 343 4.8E-82 T 22-04-2016 RPIC12D_RS08375 4e248406d5a3f10992d9d33fc86056e5 443 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 24 275 8.7E-67 T 22-04-2016 IPR017039 Virulence factor BrkB RPIC12D_RS08375 4e248406d5a3f10992d9d33fc86056e5 443 PANTHER PTHR30213:SF0 9 343 4.8E-82 T 22-04-2016 RPIC12D_RS00095 12cf945db94639698d081b5df24c1fdd 544 PANTHER PTHR24095 9 537 9.0E-257 T 22-04-2016 RPIC12D_RS00095 12cf945db94639698d081b5df24c1fdd 544 SUPERFAMILY SSF56801 12 537 5.89E-138 T 22-04-2016 RPIC12D_RS00095 12cf945db94639698d081b5df24c1fdd 544 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 526 1.0E-19 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC12D_RS00095 12cf945db94639698d081b5df24c1fdd 544 PANTHER PTHR24095:SF169 9 537 9.0E-257 T 22-04-2016 RPIC12D_RS00095 12cf945db94639698d081b5df24c1fdd 544 Gene3D G3DSA:3.40.50.980 171 195 1.6E-31 T 22-04-2016 RPIC12D_RS00095 12cf945db94639698d081b5df24c1fdd 544 Gene3D G3DSA:3.40.50.980 20 132 1.6E-31 T 22-04-2016 RPIC12D_RS00095 12cf945db94639698d081b5df24c1fdd 544 Pfam PF00501 AMP-binding enzyme 26 443 1.4E-88 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC12D_RS00095 12cf945db94639698d081b5df24c1fdd 544 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC12D_RS00095 12cf945db94639698d081b5df24c1fdd 544 Gene3D G3DSA:3.30.300.30 438 535 1.2E-30 T 22-04-2016 RPIC12D_RS00095 12cf945db94639698d081b5df24c1fdd 544 Gene3D G3DSA:3.40.50.980 196 342 7.9E-28 T 22-04-2016 RPIC12D_RS00095 12cf945db94639698d081b5df24c1fdd 544 Gene3D G3DSA:2.30.38.10 367 437 3.8E-20 T 22-04-2016 RPIC12D_RS04795 10fe4fc2fffc65949e37b927816a17cd 310 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 308 1.1E-140 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 RPIC12D_RS04795 10fe4fc2fffc65949e37b927816a17cd 310 SMART SM00937 30 140 4.0E-56 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RPIC12D_RS04795 10fe4fc2fffc65949e37b927816a17cd 310 Gene3D G3DSA:1.20.58.410 1 61 1.7E-10 T 22-04-2016 RPIC12D_RS04795 10fe4fc2fffc65949e37b927816a17cd 310 SUPERFAMILY SSF75620 3 307 1.44E-122 T 22-04-2016 RPIC12D_RS04795 10fe4fc2fffc65949e37b927816a17cd 310 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 190 206 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RPIC12D_RS04795 10fe4fc2fffc65949e37b927816a17cd 310 PANTHER PTHR11075:SF6 3 308 6.2E-146 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 RPIC12D_RS04795 10fe4fc2fffc65949e37b927816a17cd 310 PANTHER PTHR11075 3 308 6.2E-146 T 22-04-2016 RPIC12D_RS04795 10fe4fc2fffc65949e37b927816a17cd 310 Pfam PF00472 RF-1 domain 174 282 1.7E-40 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RPIC12D_RS04795 10fe4fc2fffc65949e37b927816a17cd 310 Gene3D G3DSA:3.30.160.20 173 250 2.1E-38 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RPIC12D_RS04795 10fe4fc2fffc65949e37b927816a17cd 310 Pfam PF03462 PCRF domain 3 165 2.0E-45 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RPIC12D_RS07895 7112dc4d734b2a55964f0ad059c92f91 182 SUPERFAMILY SSF52833 18 181 4.85E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS07895 7112dc4d734b2a55964f0ad059c92f91 182 PANTHER PTHR10681:SF87 10 182 1.4E-74 T 22-04-2016 RPIC12D_RS07895 7112dc4d734b2a55964f0ad059c92f91 182 Gene3D G3DSA:3.40.30.10 4 181 7.0E-52 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS07895 7112dc4d734b2a55964f0ad059c92f91 182 PANTHER PTHR10681 10 182 1.4E-74 T 22-04-2016 RPIC12D_RS07895 7112dc4d734b2a55964f0ad059c92f91 182 Pfam PF00578 AhpC/TSA family 28 143 6.0E-25 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS07895 7112dc4d734b2a55964f0ad059c92f91 182 PIRSF PIRSF000239 1 182 4.4E-41 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 RPIC12D_RS15275 5a5c0d8b2c68c70e9063da6f9cef253a 159 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 24 46 1.8E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS15275 5a5c0d8b2c68c70e9063da6f9cef253a 159 SUPERFAMILY SSF54523 52 158 3.3E-41 T 22-04-2016 RPIC12D_RS15275 5a5c0d8b2c68c70e9063da6f9cef253a 159 Pfam PF08334 Type II secretion system (T2SS), protein G 48 157 2.7E-44 T 22-04-2016 IPR013545 Type II secretion system protein G RPIC12D_RS15275 5a5c0d8b2c68c70e9063da6f9cef253a 159 PRINTS PR00813 Bacterial general secretion pathway protein G signature 25 50 5.8E-18 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RPIC12D_RS15275 5a5c0d8b2c68c70e9063da6f9cef253a 159 PRINTS PR00813 Bacterial general secretion pathway protein G signature 61 79 5.8E-18 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RPIC12D_RS15275 5a5c0d8b2c68c70e9063da6f9cef253a 159 PANTHER PTHR30093:SF9 21 159 3.8E-68 T 22-04-2016 RPIC12D_RS15275 5a5c0d8b2c68c70e9063da6f9cef253a 159 Gene3D G3DSA:3.30.700.10 26 90 2.9E-10 T 22-04-2016 RPIC12D_RS15275 5a5c0d8b2c68c70e9063da6f9cef253a 159 PANTHER PTHR30093 21 159 3.8E-68 T 22-04-2016 RPIC12D_RS15275 5a5c0d8b2c68c70e9063da6f9cef253a 159 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 24 44 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS15275 5a5c0d8b2c68c70e9063da6f9cef253a 159 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 24 158 4.0E-61 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 RPIC12D_RS15275 5a5c0d8b2c68c70e9063da6f9cef253a 159 Pfam PF13633 Prokaryotic N-terminal methylation site 24 47 7.9E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS09210 24ab5d425c31157dfb2b1be8b3803fb9 326 SUPERFAMILY SSF51621 29 262 1.92E-41 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS09210 24ab5d425c31157dfb2b1be8b3803fb9 326 PIRSF PIRSF015582 38 321 2.1E-47 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like RPIC12D_RS09210 24ab5d425c31157dfb2b1be8b3803fb9 326 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 46 251 2.7E-12 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 RPIC12D_RS09210 24ab5d425c31157dfb2b1be8b3803fb9 326 Gene3D G3DSA:3.20.20.60 26 262 2.1E-46 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS09210 24ab5d425c31157dfb2b1be8b3803fb9 326 PANTHER PTHR11105 2 325 1.4E-50 T 22-04-2016 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 PANTHER PTHR30603 69 373 3.1E-113 T 22-04-2016 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 Pfam PF04545 Sigma-70, region 4 312 364 1.4E-16 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 Gene3D G3DSA:1.10.10.10 308 373 1.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 Gene3D G3DSA:1.10.10.10 215 266 1.3E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 SUPERFAMILY SSF88659 215 291 1.61E-10 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 SUPERFAMILY SSF88946 104 212 1.96E-43 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 SUPERFAMILY SSF88659 275 372 1.7E-25 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 PRINTS PR00046 Major sigma-70 factor signature 316 328 1.4E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 PRINTS PR00046 Major sigma-70 factor signature 166 179 1.4E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 PRINTS PR00046 Major sigma-70 factor signature 352 363 1.4E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 PRINTS PR00046 Major sigma-70 factor signature 337 352 1.4E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 PRINTS PR00046 Major sigma-70 factor signature 190 198 1.4E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 Gene3D G3DSA:1.10.601.10 59 211 9.8E-52 T 22-04-2016 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 166 179 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 PANTHER PTHR30603:SF15 69 373 3.1E-113 T 22-04-2016 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 138 366 2.9E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 94 377 2.8E-136 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 Pfam PF00140 Sigma-70 factor, region 1.2 104 137 3.6E-7 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 337 363 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 Pfam PF04542 Sigma-70 region 2 142 211 5.8E-20 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 Pfam PF04539 Sigma-70 region 3 222 299 8.9E-14 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS05750 e6c3f70b6373e2de35e82fb4dd490de1 378 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 10 378 38.351 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS00065 3a2d8b9a52fa651ba54944727ee64d4b 244 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 111 5.1E-26 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS00065 3a2d8b9a52fa651ba54944727ee64d4b 244 PANTHER PTHR30614 1 222 1.9E-72 T 22-04-2016 RPIC12D_RS00065 3a2d8b9a52fa651ba54944727ee64d4b 244 PANTHER PTHR30614:SF18 1 222 1.9E-72 T 22-04-2016 RPIC12D_RS00065 3a2d8b9a52fa651ba54944727ee64d4b 244 SUPERFAMILY SSF161098 15 202 1.3E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS00065 3a2d8b9a52fa651ba54944727ee64d4b 244 Gene3D G3DSA:1.10.3720.10 13 216 2.0E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS00065 3a2d8b9a52fa651ba54944727ee64d4b 244 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 216 2.8E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS08650 2933a49313d04f5dc26cf5b938dcb714 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 313 1.2E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS08650 2933a49313d04f5dc26cf5b938dcb714 324 SUPERFAMILY SSF161098 31 308 8.24E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS08650 2933a49313d04f5dc26cf5b938dcb714 324 PANTHER PTHR30425 11 324 3.4E-148 T 22-04-2016 RPIC12D_RS08650 2933a49313d04f5dc26cf5b938dcb714 324 PANTHER PTHR30425:SF1 11 324 3.4E-148 T 22-04-2016 RPIC12D_RS08650 2933a49313d04f5dc26cf5b938dcb714 324 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 23 316 2.5E-91 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 RPIC12D_RS08650 2933a49313d04f5dc26cf5b938dcb714 324 Gene3D G3DSA:1.10.3720.10 30 320 1.5E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS26650 d901368e4c40fd9f006efce2e0d0873a 84 PANTHER PTHR13903 2 84 3.4E-13 T 22-04-2016 IPR012093 Pirin RPIC12D_RS26650 d901368e4c40fd9f006efce2e0d0873a 84 PANTHER PTHR13903:SF4 2 84 3.4E-13 T 22-04-2016 RPIC12D_RS26650 d901368e4c40fd9f006efce2e0d0873a 84 Gene3D G3DSA:2.60.120.10 18 84 7.8E-14 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS26650 d901368e4c40fd9f006efce2e0d0873a 84 SUPERFAMILY SSF51182 2 83 1.33E-11 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS07510 d6575a4261a842f7e794134eed5a3f9a 529 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 53 497 3.8E-132 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 RPIC12D_RS07510 d6575a4261a842f7e794134eed5a3f9a 529 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 21 515 45.063 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 RPIC12D_RS07510 d6575a4261a842f7e794134eed5a3f9a 529 PANTHER PTHR32057 45 529 1.1E-192 T 22-04-2016 RPIC12D_RS14045 b6b16f11efe663b2ea53b2d5e0bed89e 528 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 25 527 61.852 T 22-04-2016 IPR023704 Glucan biosynthesis protein G UniPathway: UPA00637 RPIC12D_RS14045 b6b16f11efe663b2ea53b2d5e0bed89e 528 Gene3D G3DSA:2.70.98.10 42 414 4.8E-173 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 RPIC12D_RS14045 b6b16f11efe663b2ea53b2d5e0bed89e 528 SUPERFAMILY SSF81296 416 527 2.1E-30 T 22-04-2016 IPR014756 Immunoglobulin E-set RPIC12D_RS14045 b6b16f11efe663b2ea53b2d5e0bed89e 528 PIRSF PIRSF006281 3 528 8.4E-223 T 22-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 RPIC12D_RS14045 b6b16f11efe663b2ea53b2d5e0bed89e 528 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 43 524 6.9E-202 T 22-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 RPIC12D_RS14045 b6b16f11efe663b2ea53b2d5e0bed89e 528 PANTHER PTHR30504:SF4 42 526 2.6E-232 T 22-04-2016 RPIC12D_RS14045 b6b16f11efe663b2ea53b2d5e0bed89e 528 Gene3D G3DSA:2.60.40.10 417 527 3.2E-36 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC12D_RS14045 b6b16f11efe663b2ea53b2d5e0bed89e 528 SUPERFAMILY SSF74650 43 412 5.65E-163 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RPIC12D_RS14045 b6b16f11efe663b2ea53b2d5e0bed89e 528 PANTHER PTHR30504 42 526 2.6E-232 T 22-04-2016 RPIC12D_RS13525 355a695eb821dc9bb1bbc379378f238c 424 Pfam PF03471 Transporter associated domain 344 417 1.0E-15 T 22-04-2016 IPR005170 Transporter-associated domain RPIC12D_RS13525 355a695eb821dc9bb1bbc379378f238c 424 Pfam PF01595 Domain of unknown function DUF21 13 183 2.2E-45 T 22-04-2016 IPR002550 Domain of unknown function DUF21 RPIC12D_RS13525 355a695eb821dc9bb1bbc379378f238c 424 SUPERFAMILY SSF54631 197 332 1.65E-25 T 22-04-2016 RPIC12D_RS13525 355a695eb821dc9bb1bbc379378f238c 424 SUPERFAMILY SSF56176 344 421 5.73E-18 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS13525 355a695eb821dc9bb1bbc379378f238c 424 PANTHER PTHR22777 1 415 7.3E-116 T 22-04-2016 RPIC12D_RS13525 355a695eb821dc9bb1bbc379378f238c 424 SMART SM01091 341 419 5.9E-22 T 22-04-2016 IPR005170 Transporter-associated domain RPIC12D_RS13525 355a695eb821dc9bb1bbc379378f238c 424 Gene3D G3DSA:3.10.580.10 195 318 1.5E-16 T 22-04-2016 RPIC12D_RS13525 355a695eb821dc9bb1bbc379378f238c 424 Pfam PF00571 CBS domain 279 326 4.1E-4 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS13525 355a695eb821dc9bb1bbc379378f238c 424 Pfam PF00571 CBS domain 206 263 7.2E-5 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS13525 355a695eb821dc9bb1bbc379378f238c 424 Gene3D G3DSA:3.30.465.10 319 417 1.5E-21 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC12D_RS07885 e90d588dcc4b969c877c78837db48282 240 Pfam PF00072 Response regulator receiver domain 8 117 1.1E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS07885 e90d588dcc4b969c877c78837db48282 240 Gene3D G3DSA:1.10.10.10 135 236 6.7E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07885 e90d588dcc4b969c877c78837db48282 240 SMART SM00448 6 117 6.9E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS07885 e90d588dcc4b969c877c78837db48282 240 SMART SM00862 158 234 1.8E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS07885 e90d588dcc4b969c877c78837db48282 240 SUPERFAMILY SSF52172 4 125 7.97E-43 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS07885 e90d588dcc4b969c877c78837db48282 240 Gene3D G3DSA:3.40.50.2300 2 125 6.8E-42 T 22-04-2016 RPIC12D_RS07885 e90d588dcc4b969c877c78837db48282 240 SUPERFAMILY SSF46894 135 236 4.25E-29 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS07885 e90d588dcc4b969c877c78837db48282 240 PANTHER PTHR26402 6 239 3.9E-107 T 22-04-2016 RPIC12D_RS07885 e90d588dcc4b969c877c78837db48282 240 PANTHER PTHR26402:SF292 6 239 3.9E-107 T 22-04-2016 RPIC12D_RS07885 e90d588dcc4b969c877c78837db48282 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 234 5.7E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS17065 c8d643489fdab273a599dfdc6e5074c7 248 Gene3D G3DSA:1.25.40.10 143 226 7.1E-28 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS17065 c8d643489fdab273a599dfdc6e5074c7 248 Gene3D G3DSA:1.25.40.10 38 142 3.3E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS17065 c8d643489fdab273a599dfdc6e5074c7 248 Pfam PF08238 Sel1 repeat 146 180 1.4E-8 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS17065 c8d643489fdab273a599dfdc6e5074c7 248 Pfam PF08238 Sel1 repeat 182 218 5.4E-9 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS17065 c8d643489fdab273a599dfdc6e5074c7 248 Pfam PF08238 Sel1 repeat 75 106 1.3E-5 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS17065 c8d643489fdab273a599dfdc6e5074c7 248 Pfam PF08238 Sel1 repeat 110 144 1.8E-7 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS17065 c8d643489fdab273a599dfdc6e5074c7 248 SUPERFAMILY SSF81901 42 226 1.92E-45 T 22-04-2016 RPIC12D_RS17065 c8d643489fdab273a599dfdc6e5074c7 248 PANTHER PTHR11102 38 228 4.8E-50 T 22-04-2016 RPIC12D_RS17065 c8d643489fdab273a599dfdc6e5074c7 248 SMART SM00671 181 218 3.1E-8 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS17065 c8d643489fdab273a599dfdc6e5074c7 248 SMART SM00671 145 180 3.3E-9 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS17065 c8d643489fdab273a599dfdc6e5074c7 248 SMART SM00671 73 108 0.0014 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS17065 c8d643489fdab273a599dfdc6e5074c7 248 SMART SM00671 109 144 7.6E-7 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS17065 c8d643489fdab273a599dfdc6e5074c7 248 SMART SM00671 41 72 180.0 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS09950 c58c82146cdfb46eeaca6ac3d01e8a3c 348 Pfam PF02626 Allophanate hydrolase subunit 2 30 302 3.2E-96 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B RPIC12D_RS09950 c58c82146cdfb46eeaca6ac3d01e8a3c 348 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 7 328 2.2E-109 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B RPIC12D_RS09950 c58c82146cdfb46eeaca6ac3d01e8a3c 348 PANTHER PTHR18866 166 347 9.1E-35 T 22-04-2016 RPIC12D_RS09950 c58c82146cdfb46eeaca6ac3d01e8a3c 348 SUPERFAMILY SSF50891 193 309 4.17E-15 T 22-04-2016 IPR029000 Cyclophilin-like domain RPIC12D_RS09950 c58c82146cdfb46eeaca6ac3d01e8a3c 348 SMART SM00797 29 319 5.5E-150 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B RPIC12D_RS09950 c58c82146cdfb46eeaca6ac3d01e8a3c 348 PANTHER PTHR18866:SF74 166 347 9.1E-35 T 22-04-2016 RPIC12D_RS09950 c58c82146cdfb46eeaca6ac3d01e8a3c 348 Gene3D G3DSA:2.40.100.10 193 316 3.3E-9 T 22-04-2016 IPR029000 Cyclophilin-like domain RPIC12D_RS00455 be98da79da4adab3923f8e9f230d0efe 118 PANTHER PTHR34310:SF3 6 117 7.7E-48 T 22-04-2016 RPIC12D_RS00455 be98da79da4adab3923f8e9f230d0efe 118 PANTHER PTHR34310 6 117 7.7E-48 T 22-04-2016 RPIC12D_RS00455 be98da79da4adab3923f8e9f230d0efe 118 Pfam PF04248 Domain of unknown function (DUF427) 19 110 1.3E-33 T 22-04-2016 IPR007361 Domain of unknown function DUF427 RPIC12D_RS07730 7cb6a97aabc22c601cbaedf1a12f7c59 672 Gene3D G3DSA:3.40.50.150 14 240 3.7E-95 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS07730 7cb6a97aabc22c601cbaedf1a12f7c59 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 113 232 4.5E-44 T 22-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 RPIC12D_RS07730 7cb6a97aabc22c601cbaedf1a12f7c59 672 Gene3D G3DSA:3.50.50.60 250 322 1.3E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS07730 7cb6a97aabc22c601cbaedf1a12f7c59 672 Gene3D G3DSA:3.50.50.60 565 651 1.3E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS07730 7cb6a97aabc22c601cbaedf1a12f7c59 672 Gene3D G3DSA:3.50.50.60 384 467 1.3E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS07730 7cb6a97aabc22c601cbaedf1a12f7c59 672 PANTHER PTHR13847 214 653 7.5E-36 T 22-04-2016 RPIC12D_RS07730 7cb6a97aabc22c601cbaedf1a12f7c59 672 SUPERFAMILY SSF51905 251 468 3.5E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS07730 7cb6a97aabc22c601cbaedf1a12f7c59 672 SUPERFAMILY SSF51905 583 650 3.5E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS07730 7cb6a97aabc22c601cbaedf1a12f7c59 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 8 648 24.648 T 22-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 RPIC12D_RS07730 7cb6a97aabc22c601cbaedf1a12f7c59 672 PANTHER PTHR13847:SF206 214 653 7.5E-36 T 22-04-2016 RPIC12D_RS07730 7cb6a97aabc22c601cbaedf1a12f7c59 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 252 652 4.2E-120 T 22-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 RPIC12D_RS07730 7cb6a97aabc22c601cbaedf1a12f7c59 672 Pfam PF01266 FAD dependent oxidoreductase 252 623 3.2E-40 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIC12D_RS07730 7cb6a97aabc22c601cbaedf1a12f7c59 672 SUPERFAMILY SSF54373 466 562 7.85E-5 T 22-04-2016 RPIC12D_RS00585 5666c600e7675002898f128c3cc3f90a 317 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 68 88 - T 22-04-2016 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 RPIC12D_RS00585 5666c600e7675002898f128c3cc3f90a 317 SMART SM00849 23 214 1.1E-22 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS00585 5666c600e7675002898f128c3cc3f90a 317 SUPERFAMILY SSF56281 24 235 1.18E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS00585 5666c600e7675002898f128c3cc3f90a 317 Gene3D G3DSA:3.60.15.10 18 239 6.5E-43 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS00585 5666c600e7675002898f128c3cc3f90a 317 Pfam PF00753 Metallo-beta-lactamase superfamily 24 214 6.9E-22 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS00585 5666c600e7675002898f128c3cc3f90a 317 PANTHER PTHR11935 14 228 1.6E-27 T 22-04-2016 RPIC12D_RS00495 ff8babb6e9a278d359f428fbc29a0f92 300 PANTHER PTHR30537 1 293 5.9E-78 T 22-04-2016 RPIC12D_RS00495 ff8babb6e9a278d359f428fbc29a0f92 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 5.1E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS00495 ff8babb6e9a278d359f428fbc29a0f92 300 SUPERFAMILY SSF53850 92 295 9.59E-35 T 22-04-2016 RPIC12D_RS00495 ff8babb6e9a278d359f428fbc29a0f92 300 Pfam PF03466 LysR substrate binding domain 90 293 2.4E-34 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS00495 ff8babb6e9a278d359f428fbc29a0f92 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS00495 ff8babb6e9a278d359f428fbc29a0f92 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS00495 ff8babb6e9a278d359f428fbc29a0f92 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS00495 ff8babb6e9a278d359f428fbc29a0f92 300 SUPERFAMILY SSF46785 2 84 1.63E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00495 ff8babb6e9a278d359f428fbc29a0f92 300 Gene3D G3DSA:3.40.190.10 182 261 1.0E-24 T 22-04-2016 RPIC12D_RS00495 ff8babb6e9a278d359f428fbc29a0f92 300 Gene3D G3DSA:3.40.190.10 94 181 7.2E-22 T 22-04-2016 RPIC12D_RS00495 ff8babb6e9a278d359f428fbc29a0f92 300 Gene3D G3DSA:1.10.10.10 2 85 2.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00495 ff8babb6e9a278d359f428fbc29a0f92 300 PANTHER PTHR30537:SF26 1 293 5.9E-78 T 22-04-2016 RPIC12D_RS17080 90b5f3c1644b817f9eed18edb82cfdcb 479 Gene3D G3DSA:3.30.565.10 340 463 2.2E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS17080 90b5f3c1644b817f9eed18edb82cfdcb 479 SMART SM01049 42 137 1.3E-28 T 22-04-2016 IPR033480 Single Cache domain 2 RPIC12D_RS17080 90b5f3c1644b817f9eed18edb82cfdcb 479 PIRSF PIRSF037314 1 477 1.3E-189 T 22-04-2016 IPR017171 Signal transduction histidine kinase, MctS RPIC12D_RS17080 90b5f3c1644b817f9eed18edb82cfdcb 479 Gene3D G3DSA:3.30.450.20 37 189 1.1E-48 T 22-04-2016 RPIC12D_RS17080 90b5f3c1644b817f9eed18edb82cfdcb 479 PANTHER PTHR24421:SF1 106 479 3.5E-45 T 22-04-2016 RPIC12D_RS17080 90b5f3c1644b817f9eed18edb82cfdcb 479 SMART SM00387 370 466 2.3E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS17080 90b5f3c1644b817f9eed18edb82cfdcb 479 SUPERFAMILY SSF55874 363 463 6.55E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS17080 90b5f3c1644b817f9eed18edb82cfdcb 479 Pfam PF07730 Histidine kinase 254 327 1.9E-20 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RPIC12D_RS17080 90b5f3c1644b817f9eed18edb82cfdcb 479 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 463 1.2E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS17080 90b5f3c1644b817f9eed18edb82cfdcb 479 Pfam PF17200 Single Cache domain 2 47 196 7.6E-41 T 22-04-2016 IPR033480 Single Cache domain 2 RPIC12D_RS17080 90b5f3c1644b817f9eed18edb82cfdcb 479 PANTHER PTHR24421 106 479 3.5E-45 T 22-04-2016 RPIC12D_RS14610 cde8275060e4f8fee55441f98cc756c7 331 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 248 260 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS14610 cde8275060e4f8fee55441f98cc756c7 331 PIRSF PIRSF001415 1 331 1.6E-145 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS14610 cde8275060e4f8fee55441f98cc756c7 331 Pfam PF00490 Delta-aminolevulinic acid dehydratase 8 327 8.6E-138 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS14610 cde8275060e4f8fee55441f98cc756c7 331 SUPERFAMILY SSF51569 4 330 4.54E-143 T 22-04-2016 RPIC12D_RS14610 cde8275060e4f8fee55441f98cc756c7 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 248 264 1.8E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS14610 cde8275060e4f8fee55441f98cc756c7 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 156 175 1.8E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS14610 cde8275060e4f8fee55441f98cc756c7 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 303 322 1.8E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS14610 cde8275060e4f8fee55441f98cc756c7 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 273 288 1.8E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS14610 cde8275060e4f8fee55441f98cc756c7 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 194 213 1.8E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS14610 cde8275060e4f8fee55441f98cc756c7 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 125 139 1.8E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS14610 cde8275060e4f8fee55441f98cc756c7 331 SMART SM01004 5 329 1.7E-237 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS14610 cde8275060e4f8fee55441f98cc756c7 331 Gene3D G3DSA:3.20.20.70 4 330 3.7E-148 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS14610 cde8275060e4f8fee55441f98cc756c7 331 PANTHER PTHR11458 5 331 1.1E-178 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS01410 e784c757ca185869cf7c271468c5745c 365 PANTHER PTHR10359:SF1 11 325 2.3E-80 T 22-04-2016 RPIC12D_RS01410 e784c757ca185869cf7c271468c5745c 365 Gene3D G3DSA:1.10.340.30 24 124 2.1E-42 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC12D_RS01410 e784c757ca185869cf7c271468c5745c 365 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 8 274 3.0E-99 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 RPIC12D_RS01410 e784c757ca185869cf7c271468c5745c 365 SUPERFAMILY SSF48150 6 231 1.02E-68 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC12D_RS01410 e784c757ca185869cf7c271468c5745c 365 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 169 3.8E-20 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RPIC12D_RS01410 e784c757ca185869cf7c271468c5745c 365 Gene3D G3DSA:3.90.79.10 236 361 1.7E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS01410 e784c757ca185869cf7c271468c5745c 365 Pfam PF00633 Helix-hairpin-helix motif 101 130 1.1E-6 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 RPIC12D_RS01410 e784c757ca185869cf7c271468c5745c 365 ProSitePatterns PS01155 Endonuclease III family signature. 104 133 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 RPIC12D_RS01410 e784c757ca185869cf7c271468c5745c 365 PANTHER PTHR10359 11 325 2.3E-80 T 22-04-2016 RPIC12D_RS01410 e784c757ca185869cf7c271468c5745c 365 Pfam PF14815 NUDIX domain 242 357 3.8E-22 T 22-04-2016 IPR029119 MutY, C-terminal RPIC12D_RS01410 e784c757ca185869cf7c271468c5745c 365 SMART SM00478 41 193 3.3E-45 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RPIC12D_RS01410 e784c757ca185869cf7c271468c5745c 365 Gene3D G3DSA:1.10.1670.10 125 230 3.1E-33 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RPIC12D_RS01410 e784c757ca185869cf7c271468c5745c 365 SUPERFAMILY SSF55811 227 359 1.33E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS02465 69d4b317d913f45d231600d9cfecdbf2 391 Gene3D G3DSA:2.30.40.10 318 365 1.0E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS02465 69d4b317d913f45d231600d9cfecdbf2 391 SUPERFAMILY SSF51556 59 348 2.04E-9 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC12D_RS02465 69d4b317d913f45d231600d9cfecdbf2 391 Gene3D G3DSA:2.30.40.10 21 99 3.1E-4 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS02465 69d4b317d913f45d231600d9cfecdbf2 391 SUPERFAMILY SSF51338 23 59 3.05E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS02465 69d4b317d913f45d231600d9cfecdbf2 391 SUPERFAMILY SSF51338 348 385 3.05E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS02465 69d4b317d913f45d231600d9cfecdbf2 391 PANTHER PTHR11271:SF43 30 359 1.7E-26 T 22-04-2016 RPIC12D_RS02465 69d4b317d913f45d231600d9cfecdbf2 391 Pfam PF01979 Amidohydrolase family 183 366 3.8E-6 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RPIC12D_RS02465 69d4b317d913f45d231600d9cfecdbf2 391 PANTHER PTHR11271 30 359 1.7E-26 T 22-04-2016 RPIC12D_RS02465 69d4b317d913f45d231600d9cfecdbf2 391 PIRSF PIRSF038971 12 382 1.0E-104 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 RPIC12D_RS06775 cc111b1c34d5c61dcb1e12a73481c4e5 462 SUPERFAMILY SSF50156 216 297 1.3E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS06775 cc111b1c34d5c61dcb1e12a73481c4e5 462 Gene3D G3DSA:2.30.42.10 99 202 1.1E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS06775 cc111b1c34d5c61dcb1e12a73481c4e5 462 Gene3D G3DSA:2.30.42.10 218 301 3.8E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS06775 cc111b1c34d5c61dcb1e12a73481c4e5 462 Pfam PF02163 Peptidase family M50 6 445 5.8E-74 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 RPIC12D_RS06775 cc111b1c34d5c61dcb1e12a73481c4e5 462 SMART SM00228 220 287 1.3E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS06775 cc111b1c34d5c61dcb1e12a73481c4e5 462 SUPERFAMILY SSF50156 93 193 1.97E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS06775 cc111b1c34d5c61dcb1e12a73481c4e5 462 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 458 1.0E-94 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 RPIC12D_RS06775 cc111b1c34d5c61dcb1e12a73481c4e5 462 PANTHER PTHR22939:SF78 217 459 1.6E-63 T 22-04-2016 RPIC12D_RS06775 cc111b1c34d5c61dcb1e12a73481c4e5 462 PANTHER PTHR22939 217 459 1.6E-63 T 22-04-2016 RPIC12D_RS06775 cc111b1c34d5c61dcb1e12a73481c4e5 462 Pfam PF13180 PDZ domain 230 294 9.5E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC12D_RS13680 848b487f6d744afd8da9749fb38373db 392 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 317 334 6.7E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS13680 848b487f6d744afd8da9749fb38373db 392 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 107 117 6.7E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS13680 848b487f6d744afd8da9749fb38373db 392 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 190 202 6.7E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS13680 848b487f6d744afd8da9749fb38373db 392 Pfam PF13609 Gram-negative porin 7 340 1.4E-54 T 22-04-2016 RPIC12D_RS13680 848b487f6d744afd8da9749fb38373db 392 SUPERFAMILY SSF56935 21 392 4.58E-84 T 22-04-2016 RPIC12D_RS13680 848b487f6d744afd8da9749fb38373db 392 PRINTS PR00184 Neisseria sp. porin signature 314 338 1.1E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS13680 848b487f6d744afd8da9749fb38373db 392 PRINTS PR00184 Neisseria sp. porin signature 65 90 1.1E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS13680 848b487f6d744afd8da9749fb38373db 392 PRINTS PR00184 Neisseria sp. porin signature 191 208 1.1E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS13680 848b487f6d744afd8da9749fb38373db 392 Gene3D G3DSA:2.40.160.10 21 392 2.2E-93 T 22-04-2016 IPR023614 Porin domain RPIC12D_RS16515 c81db5f90726ce274c5bd55d787c748e 278 SUPERFAMILY SSF51182 20 272 1.41E-85 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS16515 c81db5f90726ce274c5bd55d787c748e 278 PANTHER PTHR34571:SF1 1 272 4.3E-80 T 22-04-2016 RPIC12D_RS16515 c81db5f90726ce274c5bd55d787c748e 278 TIGRFAM TIGR03214 ura-cupin: putative allantoin catabolism protein 6 272 1.9E-118 T 22-04-2016 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 RPIC12D_RS16515 c81db5f90726ce274c5bd55d787c748e 278 Pfam PF07883 Cupin domain 195 252 1.7E-7 T 22-04-2016 IPR013096 Cupin 2, conserved barrel RPIC12D_RS16515 c81db5f90726ce274c5bd55d787c748e 278 Pfam PF07883 Cupin domain 72 141 1.9E-13 T 22-04-2016 IPR013096 Cupin 2, conserved barrel RPIC12D_RS16515 c81db5f90726ce274c5bd55d787c748e 278 Gene3D G3DSA:2.60.120.10 127 277 1.4E-70 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS16515 c81db5f90726ce274c5bd55d787c748e 278 Gene3D G3DSA:2.60.120.10 1 126 3.1E-46 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS16515 c81db5f90726ce274c5bd55d787c748e 278 PANTHER PTHR34571 1 272 4.3E-80 T 22-04-2016 RPIC12D_RS03900 4585c2645de066a9ac74ee1df1369495 465 SUPERFAMILY SSF56349 162 386 7.06E-35 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC12D_RS03900 4585c2645de066a9ac74ee1df1369495 465 Pfam PF00589 Phage integrase family 237 386 2.5E-13 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS03900 4585c2645de066a9ac74ee1df1369495 465 Gene3D G3DSA:1.10.443.10 236 391 3.9E-26 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS04945 55839523efe762c7e978c2fd8dc8c767 91 Gene3D G3DSA:3.40.30.10 3 88 5.0E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS04945 55839523efe762c7e978c2fd8dc8c767 91 Pfam PF05768 Glutaredoxin-like domain (DUF836) 4 84 2.2E-18 T 22-04-2016 IPR008554 Glutaredoxin-like RPIC12D_RS04945 55839523efe762c7e978c2fd8dc8c767 91 SUPERFAMILY SSF52833 4 86 6.41E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS13735 26246a8c4df7c023fabd3ed015ac4791 400 PANTHER PTHR11014:SF80 1 399 3.6E-102 T 22-04-2016 RPIC12D_RS13735 26246a8c4df7c023fabd3ed015ac4791 400 Pfam PF07687 Peptidase dimerisation domain 182 291 6.4E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS13735 26246a8c4df7c023fabd3ed015ac4791 400 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 20 389 1.1E-113 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 RPIC12D_RS13735 26246a8c4df7c023fabd3ed015ac4791 400 SUPERFAMILY SSF55031 186 292 1.64E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS13735 26246a8c4df7c023fabd3ed015ac4791 400 Pfam PF01546 Peptidase family M20/M25/M40 79 392 4.7E-34 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC12D_RS13735 26246a8c4df7c023fabd3ed015ac4791 400 PANTHER PTHR11014 1 399 3.6E-102 T 22-04-2016 RPIC12D_RS13735 26246a8c4df7c023fabd3ed015ac4791 400 SUPERFAMILY SSF53187 5 185 1.42E-59 T 22-04-2016 RPIC12D_RS13735 26246a8c4df7c023fabd3ed015ac4791 400 SUPERFAMILY SSF53187 316 392 1.42E-59 T 22-04-2016 RPIC12D_RS13735 26246a8c4df7c023fabd3ed015ac4791 400 Gene3D G3DSA:3.30.70.360 195 291 1.8E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS13735 26246a8c4df7c023fabd3ed015ac4791 400 Gene3D G3DSA:3.40.630.10 336 393 1.5E-62 T 22-04-2016 RPIC12D_RS13735 26246a8c4df7c023fabd3ed015ac4791 400 Gene3D G3DSA:3.40.630.10 13 194 1.5E-62 T 22-04-2016 RPIC12D_RS04110 9e317030e6cd6ea67f7f42efd96edd71 348 PANTHER PTHR10289 7 346 4.0E-154 T 22-04-2016 RPIC12D_RS04110 9e317030e6cd6ea67f7f42efd96edd71 348 PIRSF PIRSF038940 4 347 8.8E-161 T 22-04-2016 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 RPIC12D_RS04110 9e317030e6cd6ea67f7f42efd96edd71 348 Pfam PF01212 Beta-eliminating lyase 7 295 2.1E-78 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 RPIC12D_RS04110 9e317030e6cd6ea67f7f42efd96edd71 348 PANTHER PTHR10289:SF8 7 346 4.0E-154 T 22-04-2016 RPIC12D_RS04110 9e317030e6cd6ea67f7f42efd96edd71 348 Gene3D G3DSA:3.40.640.10 6 254 1.2E-63 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS04110 9e317030e6cd6ea67f7f42efd96edd71 348 SUPERFAMILY SSF53383 6 343 3.34E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS04110 9e317030e6cd6ea67f7f42efd96edd71 348 Gene3D G3DSA:3.90.1150.10 257 344 2.5E-17 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS00075 5a465aeee7e0548007112dcb53d6ed06 245 PANTHER PTHR24220 5 245 5.0E-126 T 22-04-2016 RPIC12D_RS00075 5a465aeee7e0548007112dcb53d6ed06 245 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS00075 5a465aeee7e0548007112dcb53d6ed06 245 SUPERFAMILY SSF52540 4 237 2.78E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS00075 5a465aeee7e0548007112dcb53d6ed06 245 Gene3D G3DSA:3.40.50.300 2 241 1.1E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS00075 5a465aeee7e0548007112dcb53d6ed06 245 Pfam PF00005 ABC transporter 19 170 1.4E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS00075 5a465aeee7e0548007112dcb53d6ed06 245 PIRSF PIRSF039085 1 245 6.4E-106 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RPIC12D_RS00075 5a465aeee7e0548007112dcb53d6ed06 245 PANTHER PTHR24220:SF550 5 245 5.0E-126 T 22-04-2016 RPIC12D_RS00075 5a465aeee7e0548007112dcb53d6ed06 245 SMART SM00382 28 218 1.0E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS09410 89f2e537460b5fb4148aaeae93a0a45e 529 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 234 525 1.0E-128 T 22-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type RPIC12D_RS09410 89f2e537460b5fb4148aaeae93a0a45e 529 Pfam PF02653 Branched-chain amino acid transport system / permease component 235 511 6.1E-54 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS09410 89f2e537460b5fb4148aaeae93a0a45e 529 PANTHER PTHR11795:SF349 230 528 4.7E-151 T 22-04-2016 RPIC12D_RS09410 89f2e537460b5fb4148aaeae93a0a45e 529 PANTHER PTHR11795 230 528 4.7E-151 T 22-04-2016 RPIC12D_RS05205 f80918ca65eedca70b66c2674dbe02b4 261 Gene3D G3DSA:3.40.50.300 70 228 2.3E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05205 f80918ca65eedca70b66c2674dbe02b4 261 PIRSF PIRSF003073 1 252 1.6E-72 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein RPIC12D_RS05205 f80918ca65eedca70b66c2674dbe02b4 261 SMART SM00382 97 234 1.6E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS05205 f80918ca65eedca70b66c2674dbe02b4 261 PANTHER PTHR30050 1 259 4.4E-72 T 22-04-2016 RPIC12D_RS05205 f80918ca65eedca70b66c2674dbe02b4 261 SUPERFAMILY SSF52540 76 232 1.41E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05205 f80918ca65eedca70b66c2674dbe02b4 261 PANTHER PTHR30050:SF6 1 259 4.4E-72 T 22-04-2016 RPIC12D_RS05205 f80918ca65eedca70b66c2674dbe02b4 261 Pfam PF01695 IstB-like ATP binding protein 54 230 1.3E-63 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 RPIC12D_RS16760 22901e0970a09c854c5ab2cab54f6dd7 301 Gene3D G3DSA:3.40.190.10 126 232 1.3E-27 T 22-04-2016 RPIC12D_RS16760 22901e0970a09c854c5ab2cab54f6dd7 301 SUPERFAMILY SSF53850 12 271 5.93E-57 T 22-04-2016 RPIC12D_RS16760 22901e0970a09c854c5ab2cab54f6dd7 301 Gene3D G3DSA:3.40.190.10 233 274 2.3E-26 T 22-04-2016 RPIC12D_RS16760 22901e0970a09c854c5ab2cab54f6dd7 301 Gene3D G3DSA:3.40.190.10 37 125 2.3E-26 T 22-04-2016 RPIC12D_RS16760 22901e0970a09c854c5ab2cab54f6dd7 301 PANTHER PTHR30085 8 297 1.0E-107 T 22-04-2016 RPIC12D_RS16760 22901e0970a09c854c5ab2cab54f6dd7 301 SMART SM00062 40 272 5.8E-49 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS16760 22901e0970a09c854c5ab2cab54f6dd7 301 PANTHER PTHR30085:SF2 8 297 1.0E-107 T 22-04-2016 RPIC12D_RS16760 22901e0970a09c854c5ab2cab54f6dd7 301 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 270 1.6E-44 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS24185 a6d924b40e5143d39e03f65f4afbf7bc 157 PANTHER PTHR11820:SF85 1 153 4.6E-75 T 22-04-2016 RPIC12D_RS24185 a6d924b40e5143d39e03f65f4afbf7bc 157 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 28 155 1.7E-22 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC12D_RS24185 a6d924b40e5143d39e03f65f4afbf7bc 157 Gene3D G3DSA:3.90.850.10 13 155 8.9E-26 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC12D_RS24185 a6d924b40e5143d39e03f65f4afbf7bc 157 PANTHER PTHR11820 1 153 4.6E-75 T 22-04-2016 RPIC12D_RS24185 a6d924b40e5143d39e03f65f4afbf7bc 157 SUPERFAMILY SSF56529 23 156 2.09E-32 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC12D_RS02620 d7f23cfb08ac16ba6539e099b4cac610 93 SUPERFAMILY SSF54909 1 88 1.24E-28 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC12D_RS02620 d7f23cfb08ac16ba6539e099b4cac610 93 Gene3D G3DSA:3.30.70.900 1 91 3.3E-12 T 22-04-2016 RPIC12D_RS02620 d7f23cfb08ac16ba6539e099b4cac610 93 Pfam PF03992 Antibiotic biosynthesis monooxygenase 2 73 1.6E-12 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain RPIC12D_RS10580 7bcc89f496c5b04b1fb1443622f4aea9 191 SUPERFAMILY SSF81342 12 189 1.26E-30 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RPIC12D_RS10580 7bcc89f496c5b04b1fb1443622f4aea9 191 Pfam PF01292 Prokaryotic cytochrome b561 15 185 9.3E-24 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RPIC12D_RS10580 7bcc89f496c5b04b1fb1443622f4aea9 191 PANTHER PTHR30529 7 188 3.5E-44 T 22-04-2016 RPIC12D_RS08545 0635c4a706b60d79541c5ef9fead9dc3 338 PANTHER PTHR10314:SF6 5 324 2.7E-174 T 22-04-2016 RPIC12D_RS08545 0635c4a706b60d79541c5ef9fead9dc3 338 Gene3D G3DSA:3.40.50.1100 90 334 1.7E-78 T 22-04-2016 RPIC12D_RS08545 0635c4a706b60d79541c5ef9fead9dc3 338 PIRSF PIRSF006278 1 338 2.0E-125 T 22-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase RPIC12D_RS08545 0635c4a706b60d79541c5ef9fead9dc3 338 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 13 321 5.8E-43 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC12D_RS08545 0635c4a706b60d79541c5ef9fead9dc3 338 Hamap MF_00807 1-aminocyclopropane-1-carboxylate deaminase [acdS]. 2 338 73.527 T 22-04-2016 IPR020601 1-aminocyclopropane-1-carboxylate deaminase, bacterial GO:0008660|GO:0009310|GO:0030170 KEGG: 00270+3.5.99.7 RPIC12D_RS08545 0635c4a706b60d79541c5ef9fead9dc3 338 TIGRFAM TIGR01274 ACC_deam: 1-aminocyclopropane-1-carboxylate deaminase 2 337 1.1E-197 T 22-04-2016 IPR005965 1-aminocyclopropane-1-carboxylate deaminase GO:0008660|GO:0009310|GO:0030170 KEGG: 00270+3.5.99.7 RPIC12D_RS08545 0635c4a706b60d79541c5ef9fead9dc3 338 PANTHER PTHR10314 5 324 2.7E-174 T 22-04-2016 RPIC12D_RS08545 0635c4a706b60d79541c5ef9fead9dc3 338 SUPERFAMILY SSF53686 4 334 3.7E-97 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC12D_RS16185 77a6581cf1a3629dc003ad53fa5e5598 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 230 4.5E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS16185 77a6581cf1a3629dc003ad53fa5e5598 236 PANTHER PTHR26402 1 232 3.8E-70 T 22-04-2016 RPIC12D_RS16185 77a6581cf1a3629dc003ad53fa5e5598 236 Gene3D G3DSA:3.40.50.2300 1 122 1.7E-35 T 22-04-2016 RPIC12D_RS16185 77a6581cf1a3629dc003ad53fa5e5598 236 SUPERFAMILY SSF46894 128 231 5.1E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS16185 77a6581cf1a3629dc003ad53fa5e5598 236 Gene3D G3DSA:1.10.10.10 126 232 5.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16185 77a6581cf1a3629dc003ad53fa5e5598 236 PANTHER PTHR26402:SF578 1 232 3.8E-70 T 22-04-2016 RPIC12D_RS16185 77a6581cf1a3629dc003ad53fa5e5598 236 SMART SM00862 149 230 4.2E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS16185 77a6581cf1a3629dc003ad53fa5e5598 236 SMART SM00448 1 112 4.7E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS16185 77a6581cf1a3629dc003ad53fa5e5598 236 Pfam PF00072 Response regulator receiver domain 3 112 3.4E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS16185 77a6581cf1a3629dc003ad53fa5e5598 236 SUPERFAMILY SSF52172 1 118 4.27E-37 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS00685 c762a5552d2eafac892f87c9d11a0322 359 SMART SM00849 42 270 2.1E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS00685 c762a5552d2eafac892f87c9d11a0322 359 PANTHER PTHR11935:SF109 24 131 1.5E-41 T 22-04-2016 RPIC12D_RS00685 c762a5552d2eafac892f87c9d11a0322 359 PANTHER PTHR11935:SF109 171 292 1.5E-41 T 22-04-2016 RPIC12D_RS00685 c762a5552d2eafac892f87c9d11a0322 359 Gene3D G3DSA:3.60.15.10 175 300 2.3E-49 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS00685 c762a5552d2eafac892f87c9d11a0322 359 Gene3D G3DSA:3.60.15.10 15 132 2.3E-49 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS00685 c762a5552d2eafac892f87c9d11a0322 359 SUPERFAMILY SSF56281 16 355 1.31E-69 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS00685 c762a5552d2eafac892f87c9d11a0322 359 Pfam PF00753 Metallo-beta-lactamase superfamily 41 270 4.3E-23 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS00685 c762a5552d2eafac892f87c9d11a0322 359 PANTHER PTHR11935 24 131 1.5E-41 T 22-04-2016 RPIC12D_RS00685 c762a5552d2eafac892f87c9d11a0322 359 PANTHER PTHR11935 171 292 1.5E-41 T 22-04-2016 RPIC12D_RS15855 cfc3420b96bbe07774d16680fbc7c050 372 Pfam PF05426 Alginate lyase 56 305 7.5E-46 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 RPIC12D_RS15855 cfc3420b96bbe07774d16680fbc7c050 372 Gene3D G3DSA:1.50.10.110 100 309 1.8E-23 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 RPIC12D_RS15855 cfc3420b96bbe07774d16680fbc7c050 372 SUPERFAMILY SSF48230 37 345 5.04E-37 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase RPIC12D_RS15345 37bb837c9b46be222a368313b5130b9a 1186 SUPERFAMILY SSF52518 457 643 8.1E-15 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS15345 37bb837c9b46be222a368313b5130b9a 1186 Gene3D G3DSA:3.40.50.970 50 226 1.3E-4 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS15345 37bb837c9b46be222a368313b5130b9a 1186 PANTHER PTHR18968 361 778 3.1E-188 T 22-04-2016 RPIC12D_RS15345 37bb837c9b46be222a368313b5130b9a 1186 PANTHER PTHR18968:SF134 361 778 3.1E-188 T 22-04-2016 RPIC12D_RS15345 37bb837c9b46be222a368313b5130b9a 1186 SUPERFAMILY SSF53323 742 986 2.88E-34 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 RPIC12D_RS15345 37bb837c9b46be222a368313b5130b9a 1186 Gene3D G3DSA:3.40.920.10 744 941 6.5E-17 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RPIC12D_RS15345 37bb837c9b46be222a368313b5130b9a 1186 Gene3D G3DSA:3.40.50.970 513 686 1.8E-10 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS15345 37bb837c9b46be222a368313b5130b9a 1186 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 750 936 5.7E-24 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RPIC12D_RS15345 37bb837c9b46be222a368313b5130b9a 1186 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 477 626 2.6E-6 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RPIC12D_RS15345 37bb837c9b46be222a368313b5130b9a 1186 SUPERFAMILY SSF52518 29 211 5.12E-21 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS09635 f2284b71e60102edb5a80288b7f196df 154 PANTHER PTHR34299:SF1 25 153 1.5E-31 T 22-04-2016 RPIC12D_RS09635 f2284b71e60102edb5a80288b7f196df 154 Pfam PF01219 Prokaryotic diacylglycerol kinase 44 144 3.7E-31 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 RPIC12D_RS09635 f2284b71e60102edb5a80288b7f196df 154 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 98 109 - T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 RPIC12D_RS09635 f2284b71e60102edb5a80288b7f196df 154 Gene3D G3DSA:1.10.3830.10 31 148 1.4E-41 T 22-04-2016 RPIC12D_RS09635 f2284b71e60102edb5a80288b7f196df 154 PANTHER PTHR34299 25 153 1.5E-31 T 22-04-2016 RPIC12D_RS07025 5c674b7bf288f1e1bdd4e21401d12eb2 515 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 322 466 5.6E-43 T 22-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain RPIC12D_RS07025 5c674b7bf288f1e1bdd4e21401d12eb2 515 Gene3D G3DSA:3.40.810.20 230 493 4.9E-80 T 22-04-2016 RPIC12D_RS07025 5c674b7bf288f1e1bdd4e21401d12eb2 515 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 16 497 7.8E-229 T 22-04-2016 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 RPIC12D_RS07025 5c674b7bf288f1e1bdd4e21401d12eb2 515 Gene3D G3DSA:3.40.1080.10 15 222 1.9E-44 T 22-04-2016 RPIC12D_RS07025 5c674b7bf288f1e1bdd4e21401d12eb2 515 SUPERFAMILY SSF100950 229 497 4.35E-82 T 22-04-2016 RPIC12D_RS07025 5c674b7bf288f1e1bdd4e21401d12eb2 515 PANTHER PTHR21432 8 497 2.0E-252 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 RPIC12D_RS07025 5c674b7bf288f1e1bdd4e21401d12eb2 515 PANTHER PTHR21432:SF10 8 497 2.0E-252 T 22-04-2016 RPIC12D_RS07025 5c674b7bf288f1e1bdd4e21401d12eb2 515 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 14 218 9.8E-32 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 RPIC12D_RS07025 5c674b7bf288f1e1bdd4e21401d12eb2 515 SUPERFAMILY SSF100950 8 225 1.99E-73 T 22-04-2016 RPIC12D_RS16695 d8eb328749350b42c72d699f8952e503 464 Pfam PF00245 Alkaline phosphatase 30 463 9.7E-108 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC12D_RS16695 d8eb328749350b42c72d699f8952e503 464 SMART SM00098 31 463 2.1E-111 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC12D_RS16695 d8eb328749350b42c72d699f8952e503 464 SUPERFAMILY SSF53649 12 464 8.24E-133 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RPIC12D_RS16695 d8eb328749350b42c72d699f8952e503 464 PANTHER PTHR11596 30 464 1.2E-160 T 22-04-2016 RPIC12D_RS16695 d8eb328749350b42c72d699f8952e503 464 PRINTS PR00113 Alkaline phosphatase signature 140 160 7.0E-43 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC12D_RS16695 d8eb328749350b42c72d699f8952e503 464 PRINTS PR00113 Alkaline phosphatase signature 30 50 7.0E-43 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC12D_RS16695 d8eb328749350b42c72d699f8952e503 464 PRINTS PR00113 Alkaline phosphatase signature 275 304 7.0E-43 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC12D_RS16695 d8eb328749350b42c72d699f8952e503 464 PRINTS PR00113 Alkaline phosphatase signature 194 204 7.0E-43 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC12D_RS16695 d8eb328749350b42c72d699f8952e503 464 Gene3D G3DSA:3.40.720.10 9 464 7.1E-151 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RPIC12D_RS12500 746c316cb73786efbe7919247a447a97 499 Pfam PF01565 FAD binding domain 56 194 1.9E-42 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIC12D_RS12500 746c316cb73786efbe7919247a447a97 499 PANTHER PTHR11748:SF78 14 480 1.5E-184 T 22-04-2016 RPIC12D_RS12500 746c316cb73786efbe7919247a447a97 499 Gene3D G3DSA:3.30.465.10 111 231 1.5E-33 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC12D_RS12500 746c316cb73786efbe7919247a447a97 499 Gene3D G3DSA:1.10.45.10 432 471 1.4E-5 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RPIC12D_RS12500 746c316cb73786efbe7919247a447a97 499 SUPERFAMILY SSF56176 20 231 1.78E-68 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS12500 746c316cb73786efbe7919247a447a97 499 SUPERFAMILY SSF55103 205 474 1.21E-72 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RPIC12D_RS12500 746c316cb73786efbe7919247a447a97 499 PANTHER PTHR11748 14 480 1.5E-184 T 22-04-2016 RPIC12D_RS12500 746c316cb73786efbe7919247a447a97 499 Gene3D G3DSA:3.30.43.10 16 109 3.7E-27 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RPIC12D_RS12500 746c316cb73786efbe7919247a447a97 499 Pfam PF02913 FAD linked oxidases, C-terminal domain 230 470 3.6E-63 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RPIC12D_RS18585 2a0b06bc002e108326aec30b435755ed 215 PANTHER PTHR24220 1 203 1.5E-101 T 22-04-2016 RPIC12D_RS18585 2a0b06bc002e108326aec30b435755ed 215 Pfam PF00005 ABC transporter 1 137 3.4E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS18585 2a0b06bc002e108326aec30b435755ed 215 Gene3D G3DSA:3.40.50.300 1 192 1.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS18585 2a0b06bc002e108326aec30b435755ed 215 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 2 214 7.0E-98 T 22-04-2016 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 RPIC12D_RS18585 2a0b06bc002e108326aec30b435755ed 215 SUPERFAMILY SSF52540 3 197 1.18E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS18585 2a0b06bc002e108326aec30b435755ed 215 SMART SM00382 4 187 1.3E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS18585 2a0b06bc002e108326aec30b435755ed 215 ProSitePatterns PS00211 ABC transporters family signature. 110 124 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS18585 2a0b06bc002e108326aec30b435755ed 215 PANTHER PTHR24220:SF361 1 203 1.5E-101 T 22-04-2016 RPIC12D_RS09825 ea746ecd041e8b23dae437721871331b 187 Hamap MF_00930 Transcription elongation factor GreB [greB]. 27 183 49.655 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 RPIC12D_RS09825 ea746ecd041e8b23dae437721871331b 187 Gene3D G3DSA:3.10.50.30 107 185 1.0E-27 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RPIC12D_RS09825 ea746ecd041e8b23dae437721871331b 187 PANTHER PTHR30437:SF6 1 187 3.1E-57 T 22-04-2016 RPIC12D_RS09825 ea746ecd041e8b23dae437721871331b 187 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 109 182 6.5E-23 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RPIC12D_RS09825 ea746ecd041e8b23dae437721871331b 187 SUPERFAMILY SSF46557 29 103 1.96E-25 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RPIC12D_RS09825 ea746ecd041e8b23dae437721871331b 187 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 146 162 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RPIC12D_RS09825 ea746ecd041e8b23dae437721871331b 187 SUPERFAMILY SSF54534 108 182 6.41E-20 T 22-04-2016 RPIC12D_RS09825 ea746ecd041e8b23dae437721871331b 187 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 29 183 9.0E-65 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 RPIC12D_RS09825 ea746ecd041e8b23dae437721871331b 187 PANTHER PTHR30437 1 187 3.1E-57 T 22-04-2016 RPIC12D_RS09825 ea746ecd041e8b23dae437721871331b 187 PIRSF PIRSF006092 27 184 1.4E-41 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 RPIC12D_RS09825 ea746ecd041e8b23dae437721871331b 187 Pfam PF03449 Transcription elongation factor, N-terminal 30 100 1.7E-24 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RPIC12D_RS09825 ea746ecd041e8b23dae437721871331b 187 Hamap MF_00105 Transcription elongation factor GreA [greA]. 28 181 26.862 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 RPIC12D_RS09825 ea746ecd041e8b23dae437721871331b 187 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 43 74 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RPIC12D_RS09825 ea746ecd041e8b23dae437721871331b 187 Gene3D G3DSA:1.10.287.180 29 101 3.2E-23 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RPIC12D_RS12405 0e06596f73639b44cbc26c506d21b6fa 289 Gene3D G3DSA:1.10.3720.10 89 284 1.0E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS12405 0e06596f73639b44cbc26c506d21b6fa 289 PANTHER PTHR30151:SF0 1 288 5.6E-91 T 22-04-2016 RPIC12D_RS12405 0e06596f73639b44cbc26c506d21b6fa 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 282 1.6E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS12405 0e06596f73639b44cbc26c506d21b6fa 289 PANTHER PTHR30151 1 288 5.6E-91 T 22-04-2016 RPIC12D_RS12405 0e06596f73639b44cbc26c506d21b6fa 289 SUPERFAMILY SSF161098 91 274 9.03E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS02175 eb0cc1ca67bac5bf67c946e353fe0d78 350 PANTHER PTHR39573 236 349 9.2E-141 T 22-04-2016 RPIC12D_RS02175 eb0cc1ca67bac5bf67c946e353fe0d78 350 PANTHER PTHR39573 8 217 9.2E-141 T 22-04-2016 RPIC12D_RS02175 eb0cc1ca67bac5bf67c946e353fe0d78 350 Gene3D G3DSA:3.90.1200.10 112 349 3.3E-56 T 22-04-2016 RPIC12D_RS02175 eb0cc1ca67bac5bf67c946e353fe0d78 350 SUPERFAMILY SSF56112 12 350 3.97E-80 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC12D_RS02175 eb0cc1ca67bac5bf67c946e353fe0d78 350 PANTHER PTHR39573:SF1 236 349 9.2E-141 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 RPIC12D_RS02175 eb0cc1ca67bac5bf67c946e353fe0d78 350 PANTHER PTHR39573:SF1 8 217 9.2E-141 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 RPIC12D_RS02175 eb0cc1ca67bac5bf67c946e353fe0d78 350 Hamap MF_01497 Stress response kinase A [srkA]. 10 345 47.307 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 RPIC12D_RS02175 eb0cc1ca67bac5bf67c946e353fe0d78 350 Pfam PF01636 Phosphotransferase enzyme family 41 289 1.6E-37 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase RPIC12D_RS01135 211a28897f3c65c0d910ee5e1845e317 140 PANTHER PTHR12231:SF138 44 140 5.1E-22 T 22-04-2016 RPIC12D_RS01135 211a28897f3c65c0d910ee5e1845e317 140 SUPERFAMILY SSF52821 25 140 7.86E-35 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS01135 211a28897f3c65c0d910ee5e1845e317 140 PANTHER PTHR12231 44 140 5.1E-22 T 22-04-2016 RPIC12D_RS01135 211a28897f3c65c0d910ee5e1845e317 140 SMART SM00450 40 137 5.4E-27 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS01135 211a28897f3c65c0d910ee5e1845e317 140 Gene3D G3DSA:3.40.250.10 37 140 2.2E-33 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS01135 211a28897f3c65c0d910ee5e1845e317 140 Pfam PF00581 Rhodanese-like domain 46 133 5.0E-19 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS09155 129615a7c249bcdcaa23b258abf964eb 356 Gene3D G3DSA:3.40.718.10 2 356 1.8E-125 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RPIC12D_RS09155 129615a7c249bcdcaa23b258abf964eb 356 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 3 351 5.1E-147 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 RPIC12D_RS09155 129615a7c249bcdcaa23b258abf964eb 356 SMART SM01329 3 352 3.9E-201 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RPIC12D_RS09155 129615a7c249bcdcaa23b258abf964eb 356 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 3 352 2.1E-129 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RPIC12D_RS09155 129615a7c249bcdcaa23b258abf964eb 356 PANTHER PTHR11835 3 356 1.5E-192 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RPIC12D_RS09155 129615a7c249bcdcaa23b258abf964eb 356 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 2 356 50.087 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 RPIC12D_RS09155 129615a7c249bcdcaa23b258abf964eb 356 PANTHER PTHR11835:SF35 3 356 1.5E-192 T 22-04-2016 RPIC12D_RS09155 129615a7c249bcdcaa23b258abf964eb 356 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 243 262 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RPIC12D_RS09155 129615a7c249bcdcaa23b258abf964eb 356 SUPERFAMILY SSF53659 2 356 1.92E-119 T 22-04-2016 RPIC12D_RS01850 2367d900ff2d35c42356e5159f451d71 302 Gene3D G3DSA:3.40.190.10 127 233 5.2E-32 T 22-04-2016 RPIC12D_RS01850 2367d900ff2d35c42356e5159f451d71 302 SMART SM00062 41 273 1.5E-57 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS01850 2367d900ff2d35c42356e5159f451d71 302 SUPERFAMILY SSF53850 11 273 2.27E-61 T 22-04-2016 RPIC12D_RS01850 2367d900ff2d35c42356e5159f451d71 302 PANTHER PTHR30085 9 300 5.9E-123 T 22-04-2016 RPIC12D_RS01850 2367d900ff2d35c42356e5159f451d71 302 Gene3D G3DSA:3.40.190.10 234 275 1.2E-26 T 22-04-2016 RPIC12D_RS01850 2367d900ff2d35c42356e5159f451d71 302 Gene3D G3DSA:3.40.190.10 38 126 1.2E-26 T 22-04-2016 RPIC12D_RS01850 2367d900ff2d35c42356e5159f451d71 302 PANTHER PTHR30085:SF2 9 300 5.9E-123 T 22-04-2016 RPIC12D_RS01850 2367d900ff2d35c42356e5159f451d71 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 271 2.9E-48 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS08760 81a8a69901c5466cc9eac9a7db35b73e 92 Gene3D G3DSA:3.30.160.140 4 74 1.4E-7 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 RPIC12D_RS08760 81a8a69901c5466cc9eac9a7db35b73e 92 SUPERFAMILY SSF160272 4 90 1.18E-14 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 RPIC12D_RS08760 81a8a69901c5466cc9eac9a7db35b73e 92 Pfam PF07369 Protein of unknown function (DUF1488) 4 80 5.7E-21 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 RPIC12D_RS03525 4ec565ca757ae089c88d3ab64e9b5b8c 379 SUPERFAMILY SSF142695 204 363 2.48E-43 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RPIC12D_RS03525 4ec565ca757ae089c88d3ab64e9b5b8c 379 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 39.286 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC12D_RS03525 4ec565ca757ae089c88d3ab64e9b5b8c 379 SUPERFAMILY SSF55821 3 202 2.75E-87 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RPIC12D_RS03525 4ec565ca757ae089c88d3ab64e9b5b8c 379 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 4.7E-77 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC12D_RS03525 4ec565ca757ae089c88d3ab64e9b5b8c 379 Gene3D G3DSA:3.90.870.10 1 211 3.6E-100 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RPIC12D_RS03525 4ec565ca757ae089c88d3ab64e9b5b8c 379 PIRSF PIRSF001259 1 371 5.0E-117 T 22-04-2016 RPIC12D_RS03525 4ec565ca757ae089c88d3ab64e9b5b8c 379 PANTHER PTHR21327:SF6 1 359 1.3E-138 T 22-04-2016 RPIC12D_RS03525 4ec565ca757ae089c88d3ab64e9b5b8c 379 PANTHER PTHR21327 1 359 1.3E-138 T 22-04-2016 RPIC12D_RS03525 4ec565ca757ae089c88d3ab64e9b5b8c 379 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 5.6E-84 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC12D_RS03525 4ec565ca757ae089c88d3ab64e9b5b8c 379 Pfam PF00925 GTP cyclohydrolase II 207 361 2.6E-31 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RPIC12D_RS12675 a79a1a6d4d97beae5fb428619a8351b4 406 PANTHER PTHR30097:SF3 49 399 7.8E-74 T 22-04-2016 RPIC12D_RS12675 a79a1a6d4d97beae5fb428619a8351b4 406 Gene3D G3DSA:2.40.50.100 96 128 3.7E-10 T 22-04-2016 RPIC12D_RS12675 a79a1a6d4d97beae5fb428619a8351b4 406 Gene3D G3DSA:2.40.50.100 212 244 3.7E-10 T 22-04-2016 RPIC12D_RS12675 a79a1a6d4d97beae5fb428619a8351b4 406 PANTHER PTHR30097 49 399 7.8E-74 T 22-04-2016 RPIC12D_RS12675 a79a1a6d4d97beae5fb428619a8351b4 406 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 81 319 3.6E-51 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RPIC12D_RS12675 a79a1a6d4d97beae5fb428619a8351b4 406 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 69 391 1.3E-41 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RPIC12D_RS12675 a79a1a6d4d97beae5fb428619a8351b4 406 SUPERFAMILY SSF111369 94 326 1.7E-21 T 22-04-2016 RPIC12D_RS13975 7329201c0c04f5c2ca99ce5ccc6e100c 677 SUPERFAMILY SSF52540 333 418 5.76E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13975 7329201c0c04f5c2ca99ce5ccc6e100c 677 SUPERFAMILY SSF52540 2 141 5.76E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13975 7329201c0c04f5c2ca99ce5ccc6e100c 677 Gene3D G3DSA:3.40.50.300 2 68 5.6E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13975 7329201c0c04f5c2ca99ce5ccc6e100c 677 Gene3D G3DSA:3.40.50.300 127 256 5.6E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13975 7329201c0c04f5c2ca99ce5ccc6e100c 677 Gene3D G3DSA:3.40.50.300 294 431 5.6E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13975 7329201c0c04f5c2ca99ce5ccc6e100c 677 PANTHER PTHR32182 325 488 2.8E-14 T 22-04-2016 RPIC12D_RS13975 7329201c0c04f5c2ca99ce5ccc6e100c 677 Pfam PF13175 AAA ATPase domain 186 414 3.0E-26 T 22-04-2016 RPIC12D_RS13975 7329201c0c04f5c2ca99ce5ccc6e100c 677 Pfam PF13175 AAA ATPase domain 2 52 2.0E-12 T 22-04-2016 RPIC12D_RS13975 7329201c0c04f5c2ca99ce5ccc6e100c 677 PANTHER PTHR32182:SF7 325 488 2.8E-14 T 22-04-2016 RPIC12D_RS10455 00b22672f593295c48887e7a3f7dcd1b 540 SUPERFAMILY SSF53756 160 220 3.34E-56 T 22-04-2016 RPIC12D_RS10455 00b22672f593295c48887e7a3f7dcd1b 540 SUPERFAMILY SSF53756 248 503 3.34E-56 T 22-04-2016 RPIC12D_RS10455 00b22672f593295c48887e7a3f7dcd1b 540 SUPERFAMILY SSF53756 15 74 3.34E-56 T 22-04-2016 RPIC12D_RS10455 00b22672f593295c48887e7a3f7dcd1b 540 PANTHER PTHR12526 159 232 1.0E-35 T 22-04-2016 RPIC12D_RS10455 00b22672f593295c48887e7a3f7dcd1b 540 PANTHER PTHR12526 248 504 1.0E-35 T 22-04-2016 RPIC12D_RS10455 00b22672f593295c48887e7a3f7dcd1b 540 Pfam PF00534 Glycosyl transferases group 1 317 472 2.0E-21 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RPIC12D_RS10455 00b22672f593295c48887e7a3f7dcd1b 540 Gene3D G3DSA:3.40.50.2000 316 482 3.4E-17 T 22-04-2016 RPIC12D_RS10455 00b22672f593295c48887e7a3f7dcd1b 540 Pfam PF11997 Domain of unknown function (DUF3492) 12 292 2.9E-107 T 22-04-2016 IPR022622 Domain of unknown function DUF3492 RPIC12D_RS10080 fa26d9ab858c6f0e37323d1614577791 532 PANTHER PTHR18968 13 532 1.7E-220 T 22-04-2016 RPIC12D_RS10080 fa26d9ab858c6f0e37323d1614577791 532 SUPERFAMILY SSF52518 13 183 8.84E-41 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS10080 fa26d9ab858c6f0e37323d1614577791 532 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 RPIC12D_RS10080 fa26d9ab858c6f0e37323d1614577791 532 Gene3D G3DSA:3.40.50.970 13 181 8.4E-45 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS10080 fa26d9ab858c6f0e37323d1614577791 532 Gene3D G3DSA:3.40.50.1220 188 344 3.0E-42 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC12D_RS10080 fa26d9ab858c6f0e37323d1614577791 532 Gene3D G3DSA:3.40.50.970 354 531 2.1E-44 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS10080 fa26d9ab858c6f0e37323d1614577791 532 SUPERFAMILY SSF52518 357 531 2.86E-43 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS10080 fa26d9ab858c6f0e37323d1614577791 532 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 178 1.2E-41 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RPIC12D_RS10080 fa26d9ab858c6f0e37323d1614577791 532 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 197 323 7.9E-20 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RPIC12D_RS10080 fa26d9ab858c6f0e37323d1614577791 532 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 388 529 1.5E-30 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RPIC12D_RS10080 fa26d9ab858c6f0e37323d1614577791 532 SUPERFAMILY SSF52467 189 346 4.36E-56 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC12D_RS10080 fa26d9ab858c6f0e37323d1614577791 532 PANTHER PTHR18968:SF133 13 532 1.7E-220 T 22-04-2016 RPIC12D_RS03395 64e10269ac26f644c654dacb8ece583c 489 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 2 479 5.8E-190 T 22-04-2016 IPR021207 Integrating conjugative element protein, PFL4705 RPIC12D_RS15100 eb7b3a4c682846524bb05ee017b182cc 382 Pfam PF16916 Dimerisation domain of Zinc Transporter 221 299 3.7E-19 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RPIC12D_RS15100 eb7b3a4c682846524bb05ee017b182cc 382 Pfam PF01545 Cation efflux family 24 216 4.5E-45 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC12D_RS15100 eb7b3a4c682846524bb05ee017b182cc 382 PANTHER PTHR11562 14 309 5.3E-84 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC12D_RS15100 eb7b3a4c682846524bb05ee017b182cc 382 SUPERFAMILY SSF161111 15 217 1.96E-53 T 22-04-2016 RPIC12D_RS15100 eb7b3a4c682846524bb05ee017b182cc 382 PANTHER PTHR11562:SF18 14 309 5.3E-84 T 22-04-2016 RPIC12D_RS15100 eb7b3a4c682846524bb05ee017b182cc 382 SUPERFAMILY SSF160240 219 300 3.01E-19 T 22-04-2016 RPIC12D_RS15100 eb7b3a4c682846524bb05ee017b182cc 382 Gene3D G3DSA:1.20.1510.10 19 216 5.2E-44 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RPIC12D_RS15100 eb7b3a4c682846524bb05ee017b182cc 382 Gene3D G3DSA:3.30.70.1350 217 300 1.7E-23 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RPIC12D_RS15100 eb7b3a4c682846524bb05ee017b182cc 382 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 19 301 2.3E-67 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC12D_RS01280 08d66d783bf89600c4be55fea2cd5b40 426 Pfam PF13379 NMT1-like family 51 301 5.3E-107 T 22-04-2016 RPIC12D_RS01280 08d66d783bf89600c4be55fea2cd5b40 426 SUPERFAMILY SSF53850 54 288 1.21E-29 T 22-04-2016 RPIC12D_RS01280 08d66d783bf89600c4be55fea2cd5b40 426 PANTHER PTHR30024:SF7 18 425 7.3E-147 T 22-04-2016 RPIC12D_RS01280 08d66d783bf89600c4be55fea2cd5b40 426 PANTHER PTHR30024 18 425 7.3E-147 T 22-04-2016 RPIC12D_RS01280 08d66d783bf89600c4be55fea2cd5b40 426 Gene3D G3DSA:3.40.190.10 180 278 1.7E-7 T 22-04-2016 RPIC12D_RS16935 51508211f187a47a9450770aa37d7b23 508 SUPERFAMILY SSF56176 19 202 2.2E-28 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS16935 51508211f187a47a9450770aa37d7b23 508 PANTHER PTHR11748 5 506 1.7E-81 T 22-04-2016 RPIC12D_RS16935 51508211f187a47a9450770aa37d7b23 508 Pfam PF01565 FAD binding domain 34 160 2.7E-12 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIC12D_RS16935 51508211f187a47a9450770aa37d7b23 508 PANTHER PTHR11748:SF33 5 506 1.7E-81 T 22-04-2016 RPIC12D_RS16935 51508211f187a47a9450770aa37d7b23 508 Pfam PF08031 Berberine and berberine like 458 507 5.1E-15 T 22-04-2016 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 RPIC12D_RS16940 a2a43961424b35d89bec339980c794b3 412 PANTHER PTHR30344 6 411 2.7E-90 T 22-04-2016 RPIC12D_RS16940 a2a43961424b35d89bec339980c794b3 412 PANTHER PTHR30344:SF1 6 411 2.7E-90 T 22-04-2016 RPIC12D_RS16940 a2a43961424b35d89bec339980c794b3 412 Pfam PF10282 Lactonase, 7-bladed beta-propeller 51 410 2.2E-99 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 RPIC12D_RS16940 a2a43961424b35d89bec339980c794b3 412 SUPERFAMILY SSF51004 72 410 2.62E-39 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain RPIC12D_RS16940 a2a43961424b35d89bec339980c794b3 412 Gene3D G3DSA:2.130.10.10 50 411 3.1E-98 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RPIC12D_RS06090 8bb9f90d9f80030b663c767236469d75 123 SUPERFAMILY SSF89919 11 115 1.1E-28 T 22-04-2016 IPR023799 Ribosome-binding factor A domain RPIC12D_RS06090 8bb9f90d9f80030b663c767236469d75 123 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 10 116 1.5E-21 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RPIC12D_RS06090 8bb9f90d9f80030b663c767236469d75 123 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 14 99 4.0E-43 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RPIC12D_RS06090 8bb9f90d9f80030b663c767236469d75 123 PANTHER PTHR33515 14 123 5.5E-29 T 22-04-2016 RPIC12D_RS06090 8bb9f90d9f80030b663c767236469d75 123 Gene3D G3DSA:3.30.300.20 11 119 2.0E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RPIC12D_RS06090 8bb9f90d9f80030b663c767236469d75 123 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 7 119 18.966 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RPIC12D_RS06090 8bb9f90d9f80030b663c767236469d75 123 Pfam PF02033 Ribosome-binding factor A 11 112 2.7E-25 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RPIC12D_RS23480 51ecb2f0a2041ea87ad838a18ec0c603 273 PANTHER PTHR11358:SF2 1 272 2.0E-67 T 22-04-2016 RPIC12D_RS23480 51ecb2f0a2041ea87ad838a18ec0c603 273 PANTHER PTHR11358 1 272 2.0E-67 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS23480 51ecb2f0a2041ea87ad838a18ec0c603 273 Pfam PF00491 Arginase family 1 272 3.2E-57 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS23480 51ecb2f0a2041ea87ad838a18ec0c603 273 ProSitePatterns PS01053 Arginase family signature. 203 224 - T 22-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 RPIC12D_RS23480 51ecb2f0a2041ea87ad838a18ec0c603 273 PRINTS PR00116 Arginase signature 71 86 8.4E-31 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS23480 51ecb2f0a2041ea87ad838a18ec0c603 273 PRINTS PR00116 Arginase signature 151 169 8.4E-31 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS23480 51ecb2f0a2041ea87ad838a18ec0c603 273 PRINTS PR00116 Arginase signature 97 124 8.4E-31 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS23480 51ecb2f0a2041ea87ad838a18ec0c603 273 PRINTS PR00116 Arginase signature 200 229 8.4E-31 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS23480 51ecb2f0a2041ea87ad838a18ec0c603 273 Gene3D G3DSA:3.40.800.10 1 272 3.2E-68 T 22-04-2016 IPR023696 Ureohydrolase domain RPIC12D_RS23480 51ecb2f0a2041ea87ad838a18ec0c603 273 SUPERFAMILY SSF52768 1 272 4.5E-66 T 22-04-2016 RPIC12D_RS15815 a4e023ef21f0795e4ea6b427682b799b 494 Pfam PF06969 HemN C-terminal domain 387 455 4.8E-12 T 22-04-2016 IPR010723 HemN, C-terminal RPIC12D_RS15815 a4e023ef21f0795e4ea6b427682b799b 494 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 28 471 1.3E-172 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 RPIC12D_RS15815 a4e023ef21f0795e4ea6b427682b799b 494 SUPERFAMILY SSF102114 25 468 6.15E-138 T 22-04-2016 RPIC12D_RS15815 a4e023ef21f0795e4ea6b427682b799b 494 PANTHER PTHR13932:SF6 12 475 4.5E-214 T 22-04-2016 RPIC12D_RS15815 a4e023ef21f0795e4ea6b427682b799b 494 SMART SM00729 75 296 3.7E-52 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC12D_RS15815 a4e023ef21f0795e4ea6b427682b799b 494 Pfam PF04055 Radical SAM superfamily 81 252 6.0E-20 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC12D_RS15815 a4e023ef21f0795e4ea6b427682b799b 494 PIRSF PIRSF000167 24 478 1.5E-166 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 RPIC12D_RS15815 a4e023ef21f0795e4ea6b427682b799b 494 PANTHER PTHR13932 12 475 4.5E-214 T 22-04-2016 RPIC12D_RS15815 a4e023ef21f0795e4ea6b427682b799b 494 Gene3D G3DSA:3.80.30.20 76 300 8.4E-31 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RPIC12D_RS08435 248d1428086fed33ed7d39dfbb269909 447 PANTHER PTHR35566:SF2 1 447 1.6E-232 T 22-04-2016 RPIC12D_RS08435 248d1428086fed33ed7d39dfbb269909 447 PANTHER PTHR35566 1 447 1.6E-232 T 22-04-2016 RPIC12D_RS08435 248d1428086fed33ed7d39dfbb269909 447 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 20 446 3.6E-147 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 RPIC12D_RS08435 248d1428086fed33ed7d39dfbb269909 447 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 447 3.2E-146 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 RPIC12D_RS12780 9afd32cfc7be0a92b76febdedbe34b73 190 PANTHER PTHR34406:SF1 1 187 1.7E-28 T 22-04-2016 RPIC12D_RS12780 9afd32cfc7be0a92b76febdedbe34b73 190 SMART SM00867 28 188 3.8E-45 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC12D_RS12780 9afd32cfc7be0a92b76febdedbe34b73 190 Gene3D G3DSA:2.40.128.110 30 189 1.8E-42 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC12D_RS12780 9afd32cfc7be0a92b76febdedbe34b73 190 Pfam PF04264 YceI-like domain 30 186 1.2E-33 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC12D_RS12780 9afd32cfc7be0a92b76febdedbe34b73 190 SUPERFAMILY SSF101874 30 189 3.79E-41 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC12D_RS12780 9afd32cfc7be0a92b76febdedbe34b73 190 PANTHER PTHR34406 1 187 1.7E-28 T 22-04-2016 RPIC12D_RS02885 78da3dfb64d61f22cc6ecbdeda2e12a7 316 Gene3D G3DSA:3.90.25.10 176 314 1.8E-54 T 22-04-2016 RPIC12D_RS02885 78da3dfb64d61f22cc6ecbdeda2e12a7 316 SUPERFAMILY SSF51735 4 314 3.67E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02885 78da3dfb64d61f22cc6ecbdeda2e12a7 316 Gene3D G3DSA:3.40.50.720 3 175 3.3E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02885 78da3dfb64d61f22cc6ecbdeda2e12a7 316 PANTHER PTHR10366 9 314 2.2E-163 T 22-04-2016 RPIC12D_RS02885 78da3dfb64d61f22cc6ecbdeda2e12a7 316 PANTHER PTHR10366:SF424 9 314 2.2E-163 T 22-04-2016 RPIC12D_RS02885 78da3dfb64d61f22cc6ecbdeda2e12a7 316 Pfam PF16363 GDP-mannose 4,6 dehydratase 11 308 5.2E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS14665 4cc66b0f0ad6dbdf5bd74de1c4a82d5c 143 PANTHER PTHR12934 1 141 1.7E-65 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 RPIC12D_RS14665 4cc66b0f0ad6dbdf5bd74de1c4a82d5c 143 SUPERFAMILY SSF52080 4 141 3.79E-45 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P RPIC12D_RS14665 4cc66b0f0ad6dbdf5bd74de1c4a82d5c 143 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 142 1.7E-29 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P RPIC12D_RS14665 4cc66b0f0ad6dbdf5bd74de1c4a82d5c 143 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14665 4cc66b0f0ad6dbdf5bd74de1c4a82d5c 143 Gene3D G3DSA:3.100.10.10 32 142 4.3E-24 T 22-04-2016 RPIC12D_RS14665 4cc66b0f0ad6dbdf5bd74de1c4a82d5c 143 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 19.579 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 RPIC12D_RS14665 4cc66b0f0ad6dbdf5bd74de1c4a82d5c 143 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 2.2E-47 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 RPIC12D_RS06450 ab4cdd10017316bdeec621313e65d95b 304 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 10 277 3.9E-101 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 RPIC12D_RS06450 ab4cdd10017316bdeec621313e65d95b 304 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 18 281 1.0E-129 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 RPIC12D_RS06450 ab4cdd10017316bdeec621313e65d95b 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 282 3.5E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS06450 ab4cdd10017316bdeec621313e65d95b 304 PANTHER PTHR30406:SF6 10 286 9.9E-165 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 RPIC12D_RS06450 ab4cdd10017316bdeec621313e65d95b 304 Gene3D G3DSA:1.10.3720.10 26 282 3.1E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS06450 ab4cdd10017316bdeec621313e65d95b 304 SUPERFAMILY SSF161098 24 275 1.5E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS06450 ab4cdd10017316bdeec621313e65d95b 304 PANTHER PTHR30406 10 286 9.9E-165 T 22-04-2016 RPIC12D_RS16510 7a5577552b5061a61cd62f7f273126a0 310 SMART SM00859 5 109 1.1E-11 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RPIC12D_RS16510 7a5577552b5061a61cd62f7f273126a0 310 SUPERFAMILY SSF51735 6 141 1.27E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS16510 7a5577552b5061a61cd62f7f273126a0 310 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 4 308 8.9E-120 T 22-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS16510 7a5577552b5061a61cd62f7f273126a0 310 Gene3D G3DSA:3.40.50.720 47 128 2.0E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS16510 7a5577552b5061a61cd62f7f273126a0 310 PANTHER PTHR32338 1 308 4.1E-105 T 22-04-2016 RPIC12D_RS16510 7a5577552b5061a61cd62f7f273126a0 310 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 310 50.249 T 22-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS16510 7a5577552b5061a61cd62f7f273126a0 310 Gene3D G3DSA:3.30.360.10 129 291 8.2E-43 T 22-04-2016 RPIC12D_RS16510 7a5577552b5061a61cd62f7f273126a0 310 SUPERFAMILY SSF55347 120 291 4.58E-39 T 22-04-2016 RPIC12D_RS16510 7a5577552b5061a61cd62f7f273126a0 310 PANTHER PTHR32338:SF9 1 308 4.1E-105 T 22-04-2016 RPIC12D_RS16510 7a5577552b5061a61cd62f7f273126a0 310 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 48 106 1.6E-10 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RPIC12D_RS02565 fd7b30e3145178d45aaff8da3c4a5289 487 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 4.6E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS02565 fd7b30e3145178d45aaff8da3c4a5289 487 Gene3D G3DSA:1.10.10.10 10 78 1.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS02565 fd7b30e3145178d45aaff8da3c4a5289 487 Gene3D G3DSA:3.90.1150.10 374 484 2.3E-6 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS02565 fd7b30e3145178d45aaff8da3c4a5289 487 SUPERFAMILY SSF53383 122 484 1.32E-86 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS02565 fd7b30e3145178d45aaff8da3c4a5289 487 PANTHER PTHR11751:SF314 99 487 9.8E-113 T 22-04-2016 RPIC12D_RS02565 fd7b30e3145178d45aaff8da3c4a5289 487 PANTHER PTHR11751 99 487 9.8E-113 T 22-04-2016 RPIC12D_RS02565 fd7b30e3145178d45aaff8da3c4a5289 487 SUPERFAMILY SSF46785 10 81 1.3E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS02565 fd7b30e3145178d45aaff8da3c4a5289 487 Gene3D G3DSA:3.40.640.10 159 372 1.0E-59 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS02565 fd7b30e3145178d45aaff8da3c4a5289 487 Pfam PF00155 Aminotransferase class I and II 161 472 1.2E-31 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC12D_RS02565 fd7b30e3145178d45aaff8da3c4a5289 487 SMART SM00345 18 77 1.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS07280 e0fd96cbfcaab104f813f45e1875606a 404 SUPERFAMILY SSF55031 197 304 9.03E-30 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS07280 e0fd96cbfcaab104f813f45e1875606a 404 Pfam PF01546 Peptidase family M20/M25/M40 86 398 1.2E-35 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC12D_RS07280 e0fd96cbfcaab104f813f45e1875606a 404 PIRSF PIRSF005962 17 404 2.2E-114 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RPIC12D_RS07280 e0fd96cbfcaab104f813f45e1875606a 404 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 28 389 4.5E-99 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RPIC12D_RS07280 e0fd96cbfcaab104f813f45e1875606a 404 Pfam PF07687 Peptidase dimerisation domain 200 290 8.2E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS07280 e0fd96cbfcaab104f813f45e1875606a 404 PANTHER PTHR11014 24 404 8.1E-136 T 22-04-2016 RPIC12D_RS07280 e0fd96cbfcaab104f813f45e1875606a 404 Gene3D G3DSA:3.30.70.360 195 310 5.1E-40 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC12D_RS07280 e0fd96cbfcaab104f813f45e1875606a 404 PANTHER PTHR11014:SF63 24 404 8.1E-136 T 22-04-2016 RPIC12D_RS07280 e0fd96cbfcaab104f813f45e1875606a 404 Gene3D G3DSA:3.40.630.10 23 191 9.3E-95 T 22-04-2016 RPIC12D_RS07280 e0fd96cbfcaab104f813f45e1875606a 404 Gene3D G3DSA:3.40.630.10 311 402 9.3E-95 T 22-04-2016 RPIC12D_RS07280 e0fd96cbfcaab104f813f45e1875606a 404 SUPERFAMILY SSF53187 311 401 1.29E-83 T 22-04-2016 RPIC12D_RS07280 e0fd96cbfcaab104f813f45e1875606a 404 SUPERFAMILY SSF53187 24 210 1.29E-83 T 22-04-2016 RPIC12D_RS00950 29c5a5b2f444cb1d1f26f7c49abbddda 429 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 1.5E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS00950 29c5a5b2f444cb1d1f26f7c49abbddda 429 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 1.5E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS00950 29c5a5b2f444cb1d1f26f7c49abbddda 429 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 1.5E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS00950 29c5a5b2f444cb1d1f26f7c49abbddda 429 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 1.5E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS00950 29c5a5b2f444cb1d1f26f7c49abbddda 429 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 1.5E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS00950 29c5a5b2f444cb1d1f26f7c49abbddda 429 PRINTS PR00173 Glutamate-aspartate symporter signature 44 64 1.5E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS00950 29c5a5b2f444cb1d1f26f7c49abbddda 429 PANTHER PTHR11958:SF49 2 421 7.9E-247 T 22-04-2016 RPIC12D_RS00950 29c5a5b2f444cb1d1f26f7c49abbddda 429 PANTHER PTHR11958 2 421 7.9E-247 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS00950 29c5a5b2f444cb1d1f26f7c49abbddda 429 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 38.913 T 22-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 RPIC12D_RS00950 29c5a5b2f444cb1d1f26f7c49abbddda 429 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS00950 29c5a5b2f444cb1d1f26f7c49abbddda 429 Gene3D G3DSA:1.10.3860.10 6 406 1.0E-117 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS00950 29c5a5b2f444cb1d1f26f7c49abbddda 429 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 1.2E-112 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS00950 29c5a5b2f444cb1d1f26f7c49abbddda 429 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS00950 29c5a5b2f444cb1d1f26f7c49abbddda 429 SUPERFAMILY SSF118215 9 402 1.31E-121 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 Gene3D G3DSA:1.10.8.60 352 430 7.3E-30 T 22-04-2016 RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 534 552 1.1E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 492 510 1.1E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 596 610 1.1E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 563 581 1.1E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 735 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 Pfam PF07724 AAA domain (Cdc48 subfamily) 487 647 2.5E-47 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 SMART SM00382 207 351 1.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 SMART SM00382 488 664 2.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 324 1.9E-11 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 Gene3D G3DSA:1.10.8.60 666 749 2.4E-27 T 22-04-2016 RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 SMART SM01086 654 746 1.8E-31 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 SUPERFAMILY SSF52540 169 422 3.12E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 SUPERFAMILY SSF81923 1 143 2.62E-57 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 SUPERFAMILY SSF52540 438 741 1.48E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 519 537 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 PANTHER PTHR11638 1 762 0.0 T 22-04-2016 RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 303 315 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 PANTHER PTHR11638:SF111 1 762 0.0 T 22-04-2016 RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 Gene3D G3DSA:3.40.50.300 170 350 4.5E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 Gene3D G3DSA:1.10.1780.10 1 143 6.2E-42 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 Gene3D G3DSA:3.40.50.300 443 665 3.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 654 734 1.8E-21 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RPIC12D_RS11745 af6edce9dc32f7ae01db589e8eb7beb2 762 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.7E-14 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC12D_RS05615 38a16bd7276e5e29747bcd39bb761d2a 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 411 2.7E-71 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RPIC12D_RS05615 38a16bd7276e5e29747bcd39bb761d2a 448 PANTHER PTHR11206 2 442 1.1E-92 T 22-04-2016 RPIC12D_RS05615 38a16bd7276e5e29747bcd39bb761d2a 448 PIRSF PIRSF006603 6 448 3.2E-56 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RPIC12D_RS05615 38a16bd7276e5e29747bcd39bb761d2a 448 PANTHER PTHR11206:SF153 2 442 1.1E-92 T 22-04-2016 RPIC12D_RS05615 38a16bd7276e5e29747bcd39bb761d2a 448 Pfam PF01554 MatE 241 401 1.9E-29 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RPIC12D_RS05615 38a16bd7276e5e29747bcd39bb761d2a 448 Pfam PF01554 MatE 15 173 1.3E-25 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 Gene3D G3DSA:3.30.70.1430 572 659 8.4E-7 T 22-04-2016 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 2.8E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 PRINTS PR00702 Acriflavin resistance protein family signature 556 573 2.8E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.8E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 PRINTS PR00702 Acriflavin resistance protein family signature 626 640 2.8E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.8E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.8E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 2 1043 5.9E-266 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 PANTHER PTHR32063 2 415 0.0 T 22-04-2016 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 PANTHER PTHR32063 439 1038 0.0 T 22-04-2016 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 Gene3D G3DSA:3.30.2090.10 727 817 1.1E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 Gene3D G3DSA:3.30.2090.10 181 265 1.5E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 SUPERFAMILY SSF82866 293 510 8.76E-34 T 22-04-2016 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 SUPERFAMILY SSF82693 268 326 3.92E-14 T 22-04-2016 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 SUPERFAMILY SSF82693 147 181 3.92E-14 T 22-04-2016 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 SUPERFAMILY SSF82866 817 1042 7.06E-51 T 22-04-2016 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 SUPERFAMILY SSF82693 46 128 1.06E-15 T 22-04-2016 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 PANTHER PTHR32063:SF12 2 415 0.0 T 22-04-2016 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 PANTHER PTHR32063:SF12 439 1038 0.0 T 22-04-2016 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 SUPERFAMILY SSF82714 183 264 8.76E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 SUPERFAMILY SSF82693 571 658 1.26E-8 T 22-04-2016 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 Gene3D G3DSA:3.30.70.1430 45 129 5.9E-16 T 22-04-2016 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 Pfam PF00873 AcrB/AcrD/AcrF family 6 1038 1.2E-239 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 Gene3D G3DSA:1.10.3850.10 823 1040 2.7E-55 T 22-04-2016 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 Gene3D G3DSA:1.10.3850.10 274 512 4.3E-50 T 22-04-2016 RPIC12D_RS12670 6a7ced78b5e3d1e0b1d97090e04c9200 1055 SUPERFAMILY SSF82714 728 818 1.57E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC12D_RS11665 0b73374b24eaa133c5b8e74a27f63c60 299 Gene3D G3DSA:3.20.20.70 153 286 3.3E-55 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS11665 0b73374b24eaa133c5b8e74a27f63c60 299 PIRSF PIRSF006250 25 299 6.8E-90 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD RPIC12D_RS11665 0b73374b24eaa133c5b8e74a27f63c60 299 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 34 297 2.4E-87 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 RPIC12D_RS11665 0b73374b24eaa133c5b8e74a27f63c60 299 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 42 130 6.0E-23 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 RPIC12D_RS11665 0b73374b24eaa133c5b8e74a27f63c60 299 Gene3D G3DSA:3.90.1170.20 27 152 5.3E-46 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 RPIC12D_RS11665 0b73374b24eaa133c5b8e74a27f63c60 299 SUPERFAMILY SSF54675 26 131 1.08E-30 T 22-04-2016 RPIC12D_RS11665 0b73374b24eaa133c5b8e74a27f63c60 299 SUPERFAMILY SSF51690 132 297 1.18E-55 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RPIC12D_RS11665 0b73374b24eaa133c5b8e74a27f63c60 299 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 132 296 4.8E-54 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RPIC12D_RS11665 0b73374b24eaa133c5b8e74a27f63c60 299 PANTHER PTHR32179 6 299 1.0E-112 T 22-04-2016 RPIC12D_RS13910 b256e5276886b9a9d3fca3c50b34f9fd 531 Gene3D G3DSA:1.10.443.10 142 289 5.1E-7 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS13910 b256e5276886b9a9d3fca3c50b34f9fd 531 Gene3D G3DSA:1.10.443.10 322 368 5.1E-7 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS01655 b5f7f7eac8883345607cb6b82cccd21d 571 SUPERFAMILY SSF56801 18 561 3.92E-160 T 22-04-2016 RPIC12D_RS01655 b5f7f7eac8883345607cb6b82cccd21d 571 Gene3D G3DSA:3.40.50.980 29 230 5.4E-38 T 22-04-2016 RPIC12D_RS01655 b5f7f7eac8883345607cb6b82cccd21d 571 PANTHER PTHR24095 15 563 9.9E-202 T 22-04-2016 RPIC12D_RS01655 b5f7f7eac8883345607cb6b82cccd21d 571 Pfam PF00501 AMP-binding enzyme 35 465 8.2E-106 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC12D_RS01655 b5f7f7eac8883345607cb6b82cccd21d 571 ProSitePatterns PS00455 Putative AMP-binding domain signature. 216 227 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC12D_RS01655 b5f7f7eac8883345607cb6b82cccd21d 571 Gene3D G3DSA:3.30.300.30 462 562 4.1E-35 T 22-04-2016 RPIC12D_RS01655 b5f7f7eac8883345607cb6b82cccd21d 571 Gene3D G3DSA:3.40.50.980 231 376 1.2E-47 T 22-04-2016 RPIC12D_RS01655 b5f7f7eac8883345607cb6b82cccd21d 571 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 549 4.9E-20 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC12D_RS01655 b5f7f7eac8883345607cb6b82cccd21d 571 Gene3D G3DSA:2.30.38.10 384 458 8.4E-27 T 22-04-2016 RPIC12D_RS10045 07bb8590c7c111dc930a88c9e2683aa0 213 SUPERFAMILY SSF81301 1 109 2.29E-35 T 22-04-2016 RPIC12D_RS10045 07bb8590c7c111dc930a88c9e2683aa0 213 Gene3D G3DSA:3.30.460.10 2 107 1.7E-36 T 22-04-2016 RPIC12D_RS10045 07bb8590c7c111dc930a88c9e2683aa0 213 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 8.4E-25 T 22-04-2016 RPIC12D_RS10045 07bb8590c7c111dc930a88c9e2683aa0 213 PANTHER PTHR21043 1 106 3.2E-34 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RPIC12D_RS10045 07bb8590c7c111dc930a88c9e2683aa0 213 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 1.7E-32 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RPIC12D_RS10045 07bb8590c7c111dc930a88c9e2683aa0 213 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 22.811 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RPIC12D_RS10435 3124045378f8ccf38b895cb4b8cd499f 247 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS10435 3124045378f8ccf38b895cb4b8cd499f 247 SUPERFAMILY SSF52540 1 235 1.22E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10435 3124045378f8ccf38b895cb4b8cd499f 247 PANTHER PTHR24220 3 239 5.4E-147 T 22-04-2016 RPIC12D_RS10435 3124045378f8ccf38b895cb4b8cd499f 247 Pfam PF00005 ABC transporter 19 165 7.3E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS10435 3124045378f8ccf38b895cb4b8cd499f 247 SMART SM00382 26 213 3.5E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS10435 3124045378f8ccf38b895cb4b8cd499f 247 Gene3D G3DSA:3.40.50.300 1 236 6.9E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10435 3124045378f8ccf38b895cb4b8cd499f 247 PANTHER PTHR24220:SF474 3 239 5.4E-147 T 22-04-2016 RPIC12D_RS10435 3124045378f8ccf38b895cb4b8cd499f 247 PIRSF PIRSF039085 1 241 1.5E-106 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RPIC12D_RS09880 60389f231ef1d39f9a11b8f7d4188471 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 221 2.3E-10 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RPIC12D_RS09880 60389f231ef1d39f9a11b8f7d4188471 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site RPIC12D_RS09880 60389f231ef1d39f9a11b8f7d4188471 238 Gene3D G3DSA:3.30.230.70 6 236 5.5E-32 T 22-04-2016 IPR027408 PNPase/RNase PH domain RPIC12D_RS09880 60389f231ef1d39f9a11b8f7d4188471 238 SUPERFAMILY SSF54211 1 181 5.06E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS09880 60389f231ef1d39f9a11b8f7d4188471 238 PANTHER PTHR11953:SF0 1 236 8.9E-81 T 22-04-2016 RPIC12D_RS09880 60389f231ef1d39f9a11b8f7d4188471 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 5.1E-119 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 RPIC12D_RS09880 60389f231ef1d39f9a11b8f7d4188471 238 PANTHER PTHR11953 1 236 8.9E-81 T 22-04-2016 RPIC12D_RS09880 60389f231ef1d39f9a11b8f7d4188471 238 SUPERFAMILY SSF55666 152 236 3.8E-27 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RPIC12D_RS09880 60389f231ef1d39f9a11b8f7d4188471 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.3E-19 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RPIC12D_RS09880 60389f231ef1d39f9a11b8f7d4188471 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 49.414 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 RPIC12D_RS06125 f1ed641913445207918d2925861830b3 529 Pfam PF00581 Rhodanese-like domain 129 223 3.2E-8 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS06125 f1ed641913445207918d2925861830b3 529 Pfam PF00581 Rhodanese-like domain 276 355 5.0E-7 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS06125 f1ed641913445207918d2925861830b3 529 Pfam PF00581 Rhodanese-like domain 6 99 6.7E-7 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS06125 f1ed641913445207918d2925861830b3 529 Gene3D G3DSA:3.40.250.10 261 356 1.8E-17 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS06125 f1ed641913445207918d2925861830b3 529 Gene3D G3DSA:3.40.250.10 370 469 5.3E-9 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS06125 f1ed641913445207918d2925861830b3 529 SUPERFAMILY SSF52821 255 356 2.62E-23 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS06125 f1ed641913445207918d2925861830b3 529 SMART SM00450 6 103 6.6E-5 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS06125 f1ed641913445207918d2925861830b3 529 SMART SM00450 373 467 4.5 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS06125 f1ed641913445207918d2925861830b3 529 SMART SM00450 266 362 3.6E-7 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS06125 f1ed641913445207918d2925861830b3 529 SMART SM00450 129 227 8.3E-6 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS06125 f1ed641913445207918d2925861830b3 529 SUPERFAMILY SSF52821 104 233 2.88E-30 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS06125 f1ed641913445207918d2925861830b3 529 PANTHER PTHR12231 247 397 8.8E-24 T 22-04-2016 RPIC12D_RS06125 f1ed641913445207918d2925861830b3 529 Gene3D G3DSA:3.40.250.10 3 114 8.5E-19 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS06125 f1ed641913445207918d2925861830b3 529 SUPERFAMILY SSF52821 3 123 3.14E-25 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS06125 f1ed641913445207918d2925861830b3 529 Gene3D G3DSA:3.40.250.10 120 233 1.8E-19 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS06125 f1ed641913445207918d2925861830b3 529 SUPERFAMILY SSF52821 370 518 8.77E-19 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS06125 f1ed641913445207918d2925861830b3 529 PANTHER PTHR12231:SF83 247 397 8.8E-24 T 22-04-2016 RPIC12D_RS15300 28dce0202ff7e6e1328e209c8bce3501 478 SUPERFAMILY SSF53067 4 165 4.79E-21 T 22-04-2016 RPIC12D_RS15300 28dce0202ff7e6e1328e209c8bce3501 478 Pfam PF12693 GspL periplasmic domain 320 476 1.5E-34 T 22-04-2016 IPR025691 GspL periplasmic domain RPIC12D_RS15300 28dce0202ff7e6e1328e209c8bce3501 478 Pfam PF05134 Type II secretion system (T2SS), protein L 5 314 6.4E-75 T 22-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain RPIC12D_RS04850 8d30e56243bd91f6f061b5ab04b26270 1008 PANTHER PTHR30001 1 839 0.0 T 22-04-2016 RPIC12D_RS04850 8d30e56243bd91f6f061b5ab04b26270 1008 Gene3D G3DSA:2.40.50.140 31 124 1.4E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04850 8d30e56243bd91f6f061b5ab04b26270 1008 PANTHER PTHR30001:SF1 1 839 0.0 T 22-04-2016 RPIC12D_RS04850 8d30e56243bd91f6f061b5ab04b26270 1008 Pfam PF10150 Ribonuclease E/G family 120 389 5.7E-94 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 RPIC12D_RS04850 8d30e56243bd91f6f061b5ab04b26270 1008 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 423 1.5E-160 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 RPIC12D_RS04850 8d30e56243bd91f6f061b5ab04b26270 1008 Hamap MF_00970 Ribonuclease E [rne]. 1 988 34.854 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 RPIC12D_RS04850 8d30e56243bd91f6f061b5ab04b26270 1008 Pfam PF00575 S1 RNA binding domain 36 117 9.6E-11 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC12D_RS04850 8d30e56243bd91f6f061b5ab04b26270 1008 SMART SM00316 37 118 2.0E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC12D_RS04850 8d30e56243bd91f6f061b5ab04b26270 1008 SUPERFAMILY SSF50249 39 124 5.94E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS13210 65b92b32160bcb04e00ba20a2ef006d6 676 SUPERFAMILY SSF49899 433 664 1.02E-14 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RPIC12D_RS13210 65b92b32160bcb04e00ba20a2ef006d6 676 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 55 139 4.6E-5 T 22-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 RPIC12D_RS13210 65b92b32160bcb04e00ba20a2ef006d6 676 Gene3D G3DSA:2.60.120.200 432 591 1.2E-11 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RPIC12D_RS13210 65b92b32160bcb04e00ba20a2ef006d6 676 Gene3D G3DSA:3.40.720.10 53 330 2.1E-17 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RPIC12D_RS13210 65b92b32160bcb04e00ba20a2ef006d6 676 SUPERFAMILY SSF53649 46 308 1.89E-21 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RPIC12D_RS13070 f981c5ac37477877d0889320dd9cf29c 234 PANTHER PTHR30400:SF0 1 200 1.8E-67 T 22-04-2016 RPIC12D_RS13070 f981c5ac37477877d0889320dd9cf29c 234 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 4 233 38.866 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 RPIC12D_RS13070 f981c5ac37477877d0889320dd9cf29c 234 Gene3D G3DSA:1.10.3810.10 58 227 1.9E-64 T 22-04-2016 RPIC12D_RS13070 f981c5ac37477877d0889320dd9cf29c 234 SUPERFAMILY SSF53955 54 208 1.72E-56 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC12D_RS13070 f981c5ac37477877d0889320dd9cf29c 234 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 7 232 1.3E-103 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 RPIC12D_RS13070 f981c5ac37477877d0889320dd9cf29c 234 Pfam PF00912 Transglycosylase 57 227 4.4E-53 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RPIC12D_RS13070 f981c5ac37477877d0889320dd9cf29c 234 PANTHER PTHR30400 1 200 1.8E-67 T 22-04-2016 RPIC12D_RS08085 5fdeb1085dff06b539dd8b51ec8a76e2 265 PANTHER PTHR30136:SF7 4 265 1.0E-60 T 22-04-2016 RPIC12D_RS08085 5fdeb1085dff06b539dd8b51ec8a76e2 265 Gene3D G3DSA:3.30.450.40 81 258 9.8E-50 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS08085 5fdeb1085dff06b539dd8b51ec8a76e2 265 SUPERFAMILY SSF46785 13 84 1.13E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08085 5fdeb1085dff06b539dd8b51ec8a76e2 265 SUPERFAMILY SSF55781 70 255 1.96E-43 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS08085 5fdeb1085dff06b539dd8b51ec8a76e2 265 Gene3D G3DSA:1.10.10.10 6 80 8.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08085 5fdeb1085dff06b539dd8b51ec8a76e2 265 Pfam PF09339 IclR helix-turn-helix domain 16 65 1.8E-14 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC12D_RS08085 5fdeb1085dff06b539dd8b51ec8a76e2 265 SMART SM00346 13 102 2.0E-22 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC12D_RS08085 5fdeb1085dff06b539dd8b51ec8a76e2 265 Pfam PF01614 Bacterial transcriptional regulator 131 251 5.2E-32 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RPIC12D_RS08085 5fdeb1085dff06b539dd8b51ec8a76e2 265 PANTHER PTHR30136 4 265 1.0E-60 T 22-04-2016 RPIC12D_RS14370 df7c94f4c9f906563a7502ba99d1f237 85 PANTHER PTHR33162 1 49 3.8E-15 T 22-04-2016 RPIC12D_RS14370 df7c94f4c9f906563a7502ba99d1f237 85 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 4.9E-23 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RPIC12D_RS14370 df7c94f4c9f906563a7502ba99d1f237 85 Pfam PF02416 mttA/Hcf106 family 5 54 1.0E-14 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RPIC12D_RS14370 df7c94f4c9f906563a7502ba99d1f237 85 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 84 24.014 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RPIC12D_RS05550 9fdce48afca5287d53d2675a7553c39d 416 PANTHER PTHR21499 1 415 1.8E-160 T 22-04-2016 RPIC12D_RS05550 9fdce48afca5287d53d2675a7553c39d 416 Gene3D G3DSA:3.40.1160.10 1 254 1.1E-74 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC12D_RS05550 9fdce48afca5287d53d2675a7553c39d 416 SUPERFAMILY SSF53633 4 250 9.95E-74 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC12D_RS05550 9fdce48afca5287d53d2675a7553c39d 416 Pfam PF13840 ACT domain 348 409 1.6E-17 T 22-04-2016 IPR027795 GATS-like ACT domain RPIC12D_RS05550 9fdce48afca5287d53d2675a7553c39d 416 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 412 2.2E-112 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RPIC12D_RS05550 9fdce48afca5287d53d2675a7553c39d 416 Pfam PF00696 Amino acid kinase family 3 229 1.7E-49 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC12D_RS05550 9fdce48afca5287d53d2675a7553c39d 416 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 413 3.0E-124 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RPIC12D_RS05550 9fdce48afca5287d53d2675a7553c39d 416 Pfam PF01842 ACT domain 276 332 8.7E-10 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RPIC12D_RS05550 9fdce48afca5287d53d2675a7553c39d 416 SUPERFAMILY SSF55021 257 336 1.07E-17 T 22-04-2016 RPIC12D_RS05550 9fdce48afca5287d53d2675a7553c39d 416 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RPIC12D_RS05550 9fdce48afca5287d53d2675a7553c39d 416 PANTHER PTHR21499:SF27 1 415 1.8E-160 T 22-04-2016 RPIC12D_RS05550 9fdce48afca5287d53d2675a7553c39d 416 SUPERFAMILY SSF55021 341 414 5.5E-25 T 22-04-2016 RPIC12D_RS05550 9fdce48afca5287d53d2675a7553c39d 416 PIRSF PIRSF000726 54 416 8.6E-139 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 PANTHER PTHR24093 55 646 0.0 T 22-04-2016 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 PANTHER PTHR24093 684 741 0.0 T 22-04-2016 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 SUPERFAMILY SSF56784 417 463 4.72E-38 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 SUPERFAMILY SSF56784 346 370 4.72E-38 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 SUPERFAMILY SSF56784 494 617 4.72E-38 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 118 396 3.8E-32 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 416 663 2.5E-44 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 Pfam PF00702 haloacid dehalogenase-like hydrolase 354 589 3.9E-34 T 22-04-2016 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 360 366 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 598 610 6.3E-24 T 22-04-2016 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 201 215 6.3E-24 T 22-04-2016 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 522 532 6.3E-24 T 22-04-2016 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 358 372 6.3E-24 T 22-04-2016 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 575 594 6.3E-24 T 22-04-2016 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 Pfam PF00122 E1-E2 ATPase 119 349 5.6E-39 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 PANTHER PTHR24093:SF49 55 646 0.0 T 22-04-2016 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 PANTHER PTHR24093:SF49 684 741 0.0 T 22-04-2016 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 Gene3D G3DSA:2.70.150.10 93 255 2.0E-23 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 Gene3D G3DSA:3.40.50.1000 344 370 3.3E-35 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 Gene3D G3DSA:3.40.50.1000 508 622 3.3E-35 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 Gene3D G3DSA:3.40.1110.10 371 507 2.3E-44 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 SUPERFAMILY SSF81653 160 254 6.93E-21 T 22-04-2016 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 SUPERFAMILY SSF81665 74 150 1.57E-13 T 22-04-2016 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 SUPERFAMILY SSF81665 255 352 1.57E-13 T 22-04-2016 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 51 735 0.0 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 RPIC12D_RS16385 820ca480b3de13dbdecc7444382dd670 741 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 55 739 40.697 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 RPIC12D_RS04315 e91c0bda18b3cd58b763b4dc246d3fd7 311 SUPERFAMILY SSF52402 3 186 6.98E-58 T 22-04-2016 RPIC12D_RS04315 e91c0bda18b3cd58b763b4dc246d3fd7 311 PANTHER PTHR10909 104 307 3.7E-118 T 22-04-2016 RPIC12D_RS04315 e91c0bda18b3cd58b763b4dc246d3fd7 311 PANTHER PTHR10909:SF294 104 307 3.7E-118 T 22-04-2016 RPIC12D_RS04315 e91c0bda18b3cd58b763b4dc246d3fd7 311 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 22-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site RPIC12D_RS04315 e91c0bda18b3cd58b763b4dc246d3fd7 311 PIRSF PIRSF000089 1 311 2.2E-106 T 22-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 RPIC12D_RS04315 e91c0bda18b3cd58b763b4dc246d3fd7 311 Gene3D G3DSA:3.40.50.620 1 182 6.1E-64 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS04315 e91c0bda18b3cd58b763b4dc246d3fd7 311 SUPERFAMILY SSF52467 187 310 6.54E-47 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC12D_RS04315 e91c0bda18b3cd58b763b4dc246d3fd7 311 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 6.9E-35 T 22-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal RPIC12D_RS04315 e91c0bda18b3cd58b763b4dc246d3fd7 311 Gene3D G3DSA:3.40.50.1220 184 310 1.2E-60 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC12D_RS04315 e91c0bda18b3cd58b763b4dc246d3fd7 311 Pfam PF01012 Electron transfer flavoprotein domain 4 169 9.5E-39 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RPIC12D_RS04315 e91c0bda18b3cd58b763b4dc246d3fd7 311 SMART SM00893 3 182 1.9E-56 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RPIC12D_RS12395 5ac8cb66e42cef519faa038563895b0b 572 ProSitePatterns PS01233 Urocanase signature. 458 473 - T 22-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC12D_RS12395 5ac8cb66e42cef519faa038563895b0b 572 SUPERFAMILY SSF111326 15 571 3.79E-255 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC12D_RS12395 5ac8cb66e42cef519faa038563895b0b 572 Hamap MF_00577 Urocanate hydratase [hutU]. 5 572 50.308 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC12D_RS12395 5ac8cb66e42cef519faa038563895b0b 572 TIGRFAM TIGR01228 hutU: urocanate hydratase 20 570 1.9E-288 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC12D_RS12395 5ac8cb66e42cef519faa038563895b0b 572 Gene3D G3DSA:3.40.50.10730 152 365 4.6E-92 T 22-04-2016 RPIC12D_RS12395 5ac8cb66e42cef519faa038563895b0b 572 PIRSF PIRSF001423 5 572 2.0E-293 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC12D_RS12395 5ac8cb66e42cef519faa038563895b0b 572 Gene3D G3DSA:3.40.1770.10 376 571 3.7E-160 T 22-04-2016 RPIC12D_RS12395 5ac8cb66e42cef519faa038563895b0b 572 Gene3D G3DSA:3.40.1770.10 19 151 3.7E-160 T 22-04-2016 RPIC12D_RS12395 5ac8cb66e42cef519faa038563895b0b 572 PANTHER PTHR12216 15 571 0.0 T 22-04-2016 RPIC12D_RS12395 5ac8cb66e42cef519faa038563895b0b 572 PANTHER PTHR12216:SF3 15 571 0.0 T 22-04-2016 RPIC12D_RS12395 5ac8cb66e42cef519faa038563895b0b 572 Pfam PF01175 Urocanase 22 563 2.3E-255 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC12D_RS02190 d3cea6c710f8a35b6c347aa8292ceab9 246 PANTHER PTHR26402 1 223 1.2E-62 T 22-04-2016 RPIC12D_RS02190 d3cea6c710f8a35b6c347aa8292ceab9 246 SMART SM00448 1 113 2.8E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS02190 d3cea6c710f8a35b6c347aa8292ceab9 246 SUPERFAMILY SSF52172 1 176 6.12E-33 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS02190 d3cea6c710f8a35b6c347aa8292ceab9 246 Gene3D G3DSA:3.40.50.2300 1 120 5.0E-32 T 22-04-2016 RPIC12D_RS02190 d3cea6c710f8a35b6c347aa8292ceab9 246 Pfam PF00072 Response regulator receiver domain 3 113 9.3E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS02190 d3cea6c710f8a35b6c347aa8292ceab9 246 SMART SM00862 148 224 3.6E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS02190 d3cea6c710f8a35b6c347aa8292ceab9 246 Gene3D G3DSA:1.10.10.10 130 225 5.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS02190 d3cea6c710f8a35b6c347aa8292ceab9 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 1.2E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS15670 8d905a5674a4aaf2207ce2709629a04e 151 Gene3D G3DSA:3.40.1260.10 35 151 1.1E-33 T 22-04-2016 IPR027396 DsrEFH-like RPIC12D_RS15670 8d905a5674a4aaf2207ce2709629a04e 151 PANTHER PTHR37691:SF1 10 151 2.7E-20 T 22-04-2016 RPIC12D_RS15670 8d905a5674a4aaf2207ce2709629a04e 151 Pfam PF02635 DsrE/DsrF-like family 52 151 2.7E-13 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein RPIC12D_RS15670 8d905a5674a4aaf2207ce2709629a04e 151 SUPERFAMILY SSF75169 36 151 2.35E-22 T 22-04-2016 IPR027396 DsrEFH-like RPIC12D_RS15670 8d905a5674a4aaf2207ce2709629a04e 151 PANTHER PTHR37691 10 151 2.7E-20 T 22-04-2016 RPIC12D_RS12905 8dc12db14a4b62666b287936169e614f 347 Gene3D G3DSA:3.40.190.10 173 274 9.2E-25 T 22-04-2016 RPIC12D_RS12905 8dc12db14a4b62666b287936169e614f 347 PANTHER PTHR30118 1 314 3.4E-58 T 22-04-2016 RPIC12D_RS12905 8dc12db14a4b62666b287936169e614f 347 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 7.9E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12905 8dc12db14a4b62666b287936169e614f 347 Gene3D G3DSA:3.40.190.10 280 308 1.8E-17 T 22-04-2016 RPIC12D_RS12905 8dc12db14a4b62666b287936169e614f 347 Gene3D G3DSA:3.40.190.10 89 172 1.8E-17 T 22-04-2016 RPIC12D_RS12905 8dc12db14a4b62666b287936169e614f 347 SUPERFAMILY SSF46785 2 81 5.44E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12905 8dc12db14a4b62666b287936169e614f 347 SUPERFAMILY SSF53850 89 304 1.28E-33 T 22-04-2016 RPIC12D_RS12905 8dc12db14a4b62666b287936169e614f 347 Gene3D G3DSA:1.10.10.10 3 81 5.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12905 8dc12db14a4b62666b287936169e614f 347 Pfam PF03466 LysR substrate binding domain 93 304 1.1E-19 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS11895 ca76e9bc3e0d77053a3230d3714d4749 271 PANTHER PTHR18966 29 264 1.0E-112 T 22-04-2016 RPIC12D_RS11895 ca76e9bc3e0d77053a3230d3714d4749 271 Gene3D G3DSA:3.40.190.10 11 152 1.4E-33 T 22-04-2016 RPIC12D_RS11895 ca76e9bc3e0d77053a3230d3714d4749 271 Gene3D G3DSA:3.40.190.10 153 205 9.3E-7 T 22-04-2016 RPIC12D_RS11895 ca76e9bc3e0d77053a3230d3714d4749 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 262 1.1E-42 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS11895 ca76e9bc3e0d77053a3230d3714d4749 271 SMART SM00062 41 265 1.3E-41 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS11895 ca76e9bc3e0d77053a3230d3714d4749 271 PANTHER PTHR18966:SF243 29 264 1.0E-112 T 22-04-2016 RPIC12D_RS11895 ca76e9bc3e0d77053a3230d3714d4749 271 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 RPIC12D_RS11895 ca76e9bc3e0d77053a3230d3714d4749 271 SUPERFAMILY SSF53850 12 264 1.86E-54 T 22-04-2016 RPIC12D_RS01145 64f73d79a1813e6689bc9b5bb49171da 172 Gene3D G3DSA:3.10.420.10 10 157 2.0E-59 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RPIC12D_RS01145 64f73d79a1813e6689bc9b5bb49171da 172 PANTHER PTHR36918 1 162 9.7E-55 T 22-04-2016 RPIC12D_RS01145 64f73d79a1813e6689bc9b5bb49171da 172 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 13 148 9.8E-48 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RPIC12D_RS01145 64f73d79a1813e6689bc9b5bb49171da 172 PANTHER PTHR36918:SF1 1 162 9.7E-55 T 22-04-2016 RPIC12D_RS01145 64f73d79a1813e6689bc9b5bb49171da 172 Pfam PF02556 Preprotein translocase subunit SecB 11 148 9.9E-54 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RPIC12D_RS01145 64f73d79a1813e6689bc9b5bb49171da 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 103 125 7.4E-29 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RPIC12D_RS01145 64f73d79a1813e6689bc9b5bb49171da 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 79 99 7.4E-29 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RPIC12D_RS01145 64f73d79a1813e6689bc9b5bb49171da 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 19 36 7.4E-29 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RPIC12D_RS01145 64f73d79a1813e6689bc9b5bb49171da 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 129 147 7.4E-29 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RPIC12D_RS01145 64f73d79a1813e6689bc9b5bb49171da 172 Hamap MF_00821 Protein-export protein SecB [secB]. 1 154 31.215 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RPIC12D_RS01145 64f73d79a1813e6689bc9b5bb49171da 172 SUPERFAMILY SSF54611 5 147 3.71E-50 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RPIC12D_RS01575 2a3198a93b95b01759a57c9d94c41bc9 806 SUPERFAMILY SSF82866 667 796 4.71E-19 T 22-04-2016 RPIC12D_RS01575 2a3198a93b95b01759a57c9d94c41bc9 806 SUPERFAMILY SSF82866 181 398 1.16E-22 T 22-04-2016 RPIC12D_RS01575 2a3198a93b95b01759a57c9d94c41bc9 806 PANTHER PTHR33406 8 85 7.1E-13 T 22-04-2016 RPIC12D_RS01575 2a3198a93b95b01759a57c9d94c41bc9 806 PANTHER PTHR33406 140 396 7.1E-13 T 22-04-2016 RPIC12D_RS01575 2a3198a93b95b01759a57c9d94c41bc9 806 Gene3D G3DSA:1.20.1640.10 645 796 7.4E-8 T 22-04-2016 RPIC12D_RS01575 2a3198a93b95b01759a57c9d94c41bc9 806 Gene3D G3DSA:1.20.1640.10 208 397 6.2E-20 T 22-04-2016 RPIC12D_RS01575 2a3198a93b95b01759a57c9d94c41bc9 806 Pfam PF03176 MMPL family 161 427 1.2E-19 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 RPIC12D_RS01575 2a3198a93b95b01759a57c9d94c41bc9 806 PANTHER PTHR33406:SF2 8 85 7.1E-13 T 22-04-2016 RPIC12D_RS01575 2a3198a93b95b01759a57c9d94c41bc9 806 PANTHER PTHR33406:SF2 140 396 7.1E-13 T 22-04-2016 RPIC12D_RS00325 4fc6734bb4434aa74a83d3b71d1f938d 315 SUPERFAMILY SSF52402 13 227 2.39E-54 T 22-04-2016 RPIC12D_RS00325 4fc6734bb4434aa74a83d3b71d1f938d 315 PANTHER PTHR11807 6 257 2.0E-110 T 22-04-2016 RPIC12D_RS00325 4fc6734bb4434aa74a83d3b71d1f938d 315 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 2 263 56.552 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 RPIC12D_RS00325 4fc6734bb4434aa74a83d3b71d1f938d 315 PANTHER PTHR11807:SF16 6 257 2.0E-110 T 22-04-2016 RPIC12D_RS00325 4fc6734bb4434aa74a83d3b71d1f938d 315 Pfam PF01171 PP-loop family 34 195 1.3E-14 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RPIC12D_RS00325 4fc6734bb4434aa74a83d3b71d1f938d 315 Gene3D G3DSA:3.40.50.620 15 199 7.1E-22 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS16625 c24403512533c3e47bde73e8d3e8c551 382 PANTHER PTHR32332 72 354 9.4E-75 T 22-04-2016 RPIC12D_RS16625 c24403512533c3e47bde73e8d3e8c551 382 PANTHER PTHR32332 14 49 9.4E-75 T 22-04-2016 RPIC12D_RS16625 c24403512533c3e47bde73e8d3e8c551 382 Pfam PF03060 Nitronate monooxygenase 15 374 8.4E-35 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RPIC12D_RS16625 c24403512533c3e47bde73e8d3e8c551 382 PANTHER PTHR32332:SF18 72 354 9.4E-75 T 22-04-2016 RPIC12D_RS16625 c24403512533c3e47bde73e8d3e8c551 382 PANTHER PTHR32332:SF18 14 49 9.4E-75 T 22-04-2016 RPIC12D_RS16625 c24403512533c3e47bde73e8d3e8c551 382 SUPERFAMILY SSF51412 14 357 1.98E-31 T 22-04-2016 RPIC12D_RS16625 c24403512533c3e47bde73e8d3e8c551 382 Gene3D G3DSA:3.20.20.70 14 356 6.5E-35 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS05745 34bf88c4ea75e6597b8012c3211c5ab9 274 SMART SM00257 63 107 9.0E-10 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS05745 34bf88c4ea75e6597b8012c3211c5ab9 274 SUPERFAMILY SSF51261 63 271 5.23E-45 T 22-04-2016 IPR011055 Duplicated hybrid motif RPIC12D_RS05745 34bf88c4ea75e6597b8012c3211c5ab9 274 PANTHER PTHR21666:SF222 160 274 1.1E-39 T 22-04-2016 RPIC12D_RS05745 34bf88c4ea75e6597b8012c3211c5ab9 274 PANTHER PTHR21666 160 274 1.1E-39 T 22-04-2016 RPIC12D_RS05745 34bf88c4ea75e6597b8012c3211c5ab9 274 Pfam PF01476 LysM domain 64 106 8.2E-10 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS05745 34bf88c4ea75e6597b8012c3211c5ab9 274 Pfam PF01551 Peptidase family M23 174 267 2.9E-28 T 22-04-2016 IPR016047 Peptidase M23 RPIC12D_RS05745 34bf88c4ea75e6597b8012c3211c5ab9 274 Gene3D G3DSA:3.10.350.10 62 107 3.1E-15 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS05745 34bf88c4ea75e6597b8012c3211c5ab9 274 Gene3D G3DSA:2.70.70.10 143 272 1.0E-36 T 22-04-2016 RPIC12D_RS09770 27f9c83a3e3795c9596a0020a9c8cf3e 773 PANTHER PTHR23406 48 461 1.6E-167 T 22-04-2016 RPIC12D_RS09770 27f9c83a3e3795c9596a0020a9c8cf3e 773 Gene3D G3DSA:3.40.50.10750 584 741 2.8E-50 T 22-04-2016 RPIC12D_RS09770 27f9c83a3e3795c9596a0020a9c8cf3e 773 SUPERFAMILY SSF53659 445 769 8.22E-89 T 22-04-2016 RPIC12D_RS09770 27f9c83a3e3795c9596a0020a9c8cf3e 773 Pfam PF03949 Malic enzyme, NAD binding domain 181 375 5.3E-24 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RPIC12D_RS09770 27f9c83a3e3795c9596a0020a9c8cf3e 773 Pfam PF00390 Malic enzyme, N-terminal domain 35 167 2.2E-26 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RPIC12D_RS09770 27f9c83a3e3795c9596a0020a9c8cf3e 773 SUPERFAMILY SSF51735 179 468 2.18E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS09770 27f9c83a3e3795c9596a0020a9c8cf3e 773 Gene3D G3DSA:3.40.50.10380 25 176 1.2E-50 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RPIC12D_RS09770 27f9c83a3e3795c9596a0020a9c8cf3e 773 Pfam PF01515 Phosphate acetyl/butaryl transferase 446 766 1.4E-94 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RPIC12D_RS09770 27f9c83a3e3795c9596a0020a9c8cf3e 773 Gene3D G3DSA:3.40.50.720 177 464 5.4E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS09770 27f9c83a3e3795c9596a0020a9c8cf3e 773 PIRSF PIRSF036684 14 773 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 RPIC12D_RS09770 27f9c83a3e3795c9596a0020a9c8cf3e 773 SMART SM01274 34 167 2.2E-78 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RPIC12D_RS09770 27f9c83a3e3795c9596a0020a9c8cf3e 773 SUPERFAMILY SSF53223 26 177 2.3E-51 T 22-04-2016 RPIC12D_RS09770 27f9c83a3e3795c9596a0020a9c8cf3e 773 SMART SM00919 179 416 2.6E-138 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RPIC12D_RS10705 eb7661cef057c78c9fd762a8b2913780 227 Pfam PF02630 SCO1/SenC 68 155 2.1E-6 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC RPIC12D_RS10705 eb7661cef057c78c9fd762a8b2913780 227 Gene3D G3DSA:3.40.30.10 64 214 4.4E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS10705 eb7661cef057c78c9fd762a8b2913780 227 SUPERFAMILY SSF52833 66 214 2.24E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS02590 c1fe76cfae8b1a6147ef52972d97c05f 169 PRINTS PR01228 Eggshell protein signature 6 22 3.3E-6 T 22-04-2016 RPIC12D_RS02590 c1fe76cfae8b1a6147ef52972d97c05f 169 PRINTS PR01228 Eggshell protein signature 129 139 3.3E-6 T 22-04-2016 RPIC12D_RS02590 c1fe76cfae8b1a6147ef52972d97c05f 169 PRINTS PR01228 Eggshell protein signature 99 114 3.3E-6 T 22-04-2016 RPIC12D_RS02590 c1fe76cfae8b1a6147ef52972d97c05f 169 PRINTS PR01228 Eggshell protein signature 157 169 3.3E-6 T 22-04-2016 RPIC12D_RS25930 694af1d5c3206f70469902a9d62596e6 385 PANTHER PTHR13943:SF48 1 384 4.8E-117 T 22-04-2016 RPIC12D_RS25930 694af1d5c3206f70469902a9d62596e6 385 PANTHER PTHR13943 1 384 4.8E-117 T 22-04-2016 RPIC12D_RS25930 694af1d5c3206f70469902a9d62596e6 385 Pfam PF07287 Protein of unknown function (DUF1446) 1 180 9.5E-70 T 22-04-2016 IPR010839 Protein of unknown function DUF1446 RPIC12D_RS12505 26523abddd3774e66e12de41ced44d87 377 SUPERFAMILY SSF55103 147 373 2.4E-23 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RPIC12D_RS12505 26523abddd3774e66e12de41ced44d87 377 Pfam PF02913 FAD linked oxidases, C-terminal domain 351 372 3.1E-4 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RPIC12D_RS12505 26523abddd3774e66e12de41ced44d87 377 PANTHER PTHR11748:SF1 20 373 4.0E-81 T 22-04-2016 RPIC12D_RS12505 26523abddd3774e66e12de41ced44d87 377 PANTHER PTHR11748 20 373 4.0E-81 T 22-04-2016 RPIC12D_RS12505 26523abddd3774e66e12de41ced44d87 377 Gene3D G3DSA:1.10.45.10 344 373 1.1E-7 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RPIC12D_RS12505 26523abddd3774e66e12de41ced44d87 377 Gene3D G3DSA:3.30.465.10 60 184 1.9E-18 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC12D_RS12505 26523abddd3774e66e12de41ced44d87 377 Pfam PF01565 FAD binding domain 17 146 2.5E-21 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIC12D_RS12505 26523abddd3774e66e12de41ced44d87 377 SUPERFAMILY SSF56176 18 184 2.8E-33 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS24980 7081569a4b6f5a1c12a7410e0e05816e 70 SUPERFAMILY SSF116726 8 70 1.83E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RPIC12D_RS24980 7081569a4b6f5a1c12a7410e0e05816e 70 Pfam PF02080 TrkA-C domain 19 70 1.6E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RPIC12D_RS24980 7081569a4b6f5a1c12a7410e0e05816e 70 Gene3D G3DSA:3.30.70.1450 16 70 4.5E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RPIC12D_RS14445 651fb96d2f4bc3731d69d21decf43200 321 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS14445 651fb96d2f4bc3731d69d21decf43200 321 PANTHER PTHR24220:SF305 5 223 3.6E-99 T 22-04-2016 RPIC12D_RS14445 651fb96d2f4bc3731d69d21decf43200 321 SMART SM00382 28 217 1.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS14445 651fb96d2f4bc3731d69d21decf43200 321 Gene3D G3DSA:3.40.50.300 3 224 8.9E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14445 651fb96d2f4bc3731d69d21decf43200 321 Pfam PF00005 ABC transporter 19 161 9.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS14445 651fb96d2f4bc3731d69d21decf43200 321 SUPERFAMILY SSF52540 3 225 1.49E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14445 651fb96d2f4bc3731d69d21decf43200 321 PANTHER PTHR24220 5 223 3.6E-99 T 22-04-2016 RPIC12D_RS06130 0465314772a67ea097c8f1024068cb55 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.7E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06130 0465314772a67ea097c8f1024068cb55 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.7E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06130 0465314772a67ea097c8f1024068cb55 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.7E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06130 0465314772a67ea097c8f1024068cb55 289 PANTHER PTHR30579:SF4 1 274 2.7E-84 T 22-04-2016 RPIC12D_RS06130 0465314772a67ea097c8f1024068cb55 289 SUPERFAMILY SSF46785 4 112 4.98E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06130 0465314772a67ea097c8f1024068cb55 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.7E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06130 0465314772a67ea097c8f1024068cb55 289 SUPERFAMILY SSF53850 87 279 4.34E-24 T 22-04-2016 RPIC12D_RS06130 0465314772a67ea097c8f1024068cb55 289 PANTHER PTHR30579 1 274 2.7E-84 T 22-04-2016 RPIC12D_RS06130 0465314772a67ea097c8f1024068cb55 289 Gene3D G3DSA:3.40.190.10 93 215 6.1E-16 T 22-04-2016 RPIC12D_RS06130 0465314772a67ea097c8f1024068cb55 289 Gene3D G3DSA:1.10.10.10 2 83 3.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06130 0465314772a67ea097c8f1024068cb55 289 Pfam PF03466 LysR substrate binding domain 89 275 1.3E-23 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS10570 44589d4f83d0f75beba2ee4eff71eacd 110 PRINTS PR00606 Class ID cytochrome C signature 97 107 4.5E-22 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC12D_RS10570 44589d4f83d0f75beba2ee4eff71eacd 110 PRINTS PR00606 Class ID cytochrome C signature 47 60 4.5E-22 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC12D_RS10570 44589d4f83d0f75beba2ee4eff71eacd 110 PRINTS PR00606 Class ID cytochrome C signature 85 95 4.5E-22 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC12D_RS10570 44589d4f83d0f75beba2ee4eff71eacd 110 PRINTS PR00606 Class ID cytochrome C signature 70 83 4.5E-22 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC12D_RS10570 44589d4f83d0f75beba2ee4eff71eacd 110 PRINTS PR00606 Class ID cytochrome C signature 32 45 4.5E-22 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC12D_RS10570 44589d4f83d0f75beba2ee4eff71eacd 110 Gene3D G3DSA:1.10.760.10 28 107 5.6E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS10570 44589d4f83d0f75beba2ee4eff71eacd 110 SUPERFAMILY SSF46626 31 107 9.01E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS10570 44589d4f83d0f75beba2ee4eff71eacd 110 Pfam PF00034 Cytochrome c 31 107 5.9E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS17160 1f0bab0e47a74aa8ea332f3df71f75e5 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.3E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS17160 1f0bab0e47a74aa8ea332f3df71f75e5 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.3E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS17160 1f0bab0e47a74aa8ea332f3df71f75e5 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.2E-18 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS17160 1f0bab0e47a74aa8ea332f3df71f75e5 223 SUPERFAMILY SSF48498 82 200 3.06E-13 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC12D_RS17160 1f0bab0e47a74aa8ea332f3df71f75e5 223 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RPIC12D_RS17160 1f0bab0e47a74aa8ea332f3df71f75e5 223 Gene3D G3DSA:1.10.357.10 2 201 3.5E-43 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC12D_RS17160 1f0bab0e47a74aa8ea332f3df71f75e5 223 SUPERFAMILY SSF46689 2 85 3.69E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS17160 1f0bab0e47a74aa8ea332f3df71f75e5 223 PANTHER PTHR30055 1 212 3.9E-30 T 22-04-2016 RPIC12D_RS17160 1f0bab0e47a74aa8ea332f3df71f75e5 223 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 83 203 5.7E-40 T 22-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 RPIC12D_RS16775 6681feaa24b4086ba1df876bb8f5262d 302 Gene3D G3DSA:3.40.50.10490 112 257 8.9E-13 T 22-04-2016 RPIC12D_RS16775 6681feaa24b4086ba1df876bb8f5262d 302 Gene3D G3DSA:1.10.10.10 4 80 1.2E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16775 6681feaa24b4086ba1df876bb8f5262d 302 PANTHER PTHR30514:SF3 6 258 4.5E-30 T 22-04-2016 RPIC12D_RS16775 6681feaa24b4086ba1df876bb8f5262d 302 SUPERFAMILY SSF53697 115 262 7.69E-20 T 22-04-2016 RPIC12D_RS16775 6681feaa24b4086ba1df876bb8f5262d 302 Pfam PF01380 SIS domain 132 257 1.1E-14 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RPIC12D_RS16775 6681feaa24b4086ba1df876bb8f5262d 302 SUPERFAMILY SSF46689 5 80 2.51E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS16775 6681feaa24b4086ba1df876bb8f5262d 302 PANTHER PTHR30514 6 258 4.5E-30 T 22-04-2016 RPIC12D_RS06040 f136d5a15ed412ebe8f0bab5522643b4 487 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 364 486 4.2E-29 T 22-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain RPIC12D_RS06040 f136d5a15ed412ebe8f0bab5522643b4 487 PANTHER PTHR24960 29 403 8.3E-123 T 22-04-2016 RPIC12D_RS06040 f136d5a15ed412ebe8f0bab5522643b4 487 SUPERFAMILY SSF54862 177 374 4.94E-34 T 22-04-2016 RPIC12D_RS06040 f136d5a15ed412ebe8f0bab5522643b4 487 SUPERFAMILY SSF54862 109 131 4.94E-34 T 22-04-2016 RPIC12D_RS06040 f136d5a15ed412ebe8f0bab5522643b4 487 Pfam PF12801 4Fe-4S binding domain 99 140 2.7E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC12D_RS06040 f136d5a15ed412ebe8f0bab5522643b4 487 Gene3D G3DSA:3.30.70.20 285 329 1.0E-6 T 22-04-2016 RPIC12D_RS06040 f136d5a15ed412ebe8f0bab5522643b4 487 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 276 287 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC12D_RS06040 f136d5a15ed412ebe8f0bab5522643b4 487 Gene3D G3DSA:2.60.40.10 364 487 3.0E-33 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC12D_RS06040 f136d5a15ed412ebe8f0bab5522643b4 487 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 45 484 4.6E-149 T 22-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 RPIC12D_RS06040 f136d5a15ed412ebe8f0bab5522643b4 487 Gene3D G3DSA:1.10.1060.10 227 284 3.0E-7 T 22-04-2016 RPIC12D_RS06040 f136d5a15ed412ebe8f0bab5522643b4 487 PANTHER PTHR24960:SF45 29 403 8.3E-123 T 22-04-2016 RPIC12D_RS06040 f136d5a15ed412ebe8f0bab5522643b4 487 Pfam PF13746 4Fe-4S dicluster domain 223 329 2.1E-43 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC12D_RS14670 78a3712de0fef2ac29a7d2c3eafd633e 60 PANTHER PTHR15892 4 58 1.0E-24 T 22-04-2016 RPIC12D_RS14670 78a3712de0fef2ac29a7d2c3eafd633e 60 PIRSF PIRSF002211 1 60 6.8E-27 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RPIC12D_RS14670 78a3712de0fef2ac29a7d2c3eafd633e 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 6 59 5.0E-25 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RPIC12D_RS14670 78a3712de0fef2ac29a7d2c3eafd633e 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 3 60 20.308 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RPIC12D_RS14670 78a3712de0fef2ac29a7d2c3eafd633e 60 SUPERFAMILY SSF55129 4 58 2.09E-20 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RPIC12D_RS14670 78a3712de0fef2ac29a7d2c3eafd633e 60 Gene3D G3DSA:3.30.1390.20 4 59 3.4E-30 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RPIC12D_RS14670 78a3712de0fef2ac29a7d2c3eafd633e 60 Pfam PF00327 Ribosomal protein L30p/L7e 7 56 1.2E-18 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RPIC12D_RS02645 df753280163fc07319baa3ec4961db8b 260 Gene3D G3DSA:3.40.190.10 209 248 4.4E-4 T 22-04-2016 RPIC12D_RS02645 df753280163fc07319baa3ec4961db8b 260 Pfam PF13531 Bacterial extracellular solute-binding protein 28 253 5.6E-32 T 22-04-2016 RPIC12D_RS02645 df753280163fc07319baa3ec4961db8b 260 PANTHER PTHR30632:SF5 1 255 1.6E-70 T 22-04-2016 RPIC12D_RS02645 df753280163fc07319baa3ec4961db8b 260 SUPERFAMILY SSF53850 27 253 2.7E-41 T 22-04-2016 RPIC12D_RS02645 df753280163fc07319baa3ec4961db8b 260 PANTHER PTHR30632 1 255 1.6E-70 T 22-04-2016 RPIC12D_RS02645 df753280163fc07319baa3ec4961db8b 260 Gene3D G3DSA:3.40.190.10 26 162 2.2E-10 T 22-04-2016 RPIC12D_RS00620 6f6872944537bde62de978cb049f629b 264 PANTHER PTHR11941 4 260 9.3E-106 T 22-04-2016 RPIC12D_RS00620 6f6872944537bde62de978cb049f629b 264 SUPERFAMILY SSF52096 4 260 3.15E-76 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS00620 6f6872944537bde62de978cb049f629b 264 Gene3D G3DSA:3.90.226.10 4 202 3.1E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS00620 6f6872944537bde62de978cb049f629b 264 Gene3D G3DSA:1.10.12.10 205 260 5.4E-13 T 22-04-2016 IPR014748 Crontonase, C-terminal RPIC12D_RS00620 6f6872944537bde62de978cb049f629b 264 PANTHER PTHR11941:SF86 4 260 9.3E-106 T 22-04-2016 RPIC12D_RS00620 6f6872944537bde62de978cb049f629b 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 260 7.6E-56 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC12D_RS09310 2cd31e21e8200304c6d61c23c6fa5919 331 Gene3D G3DSA:3.40.190.10 177 261 1.0E-16 T 22-04-2016 RPIC12D_RS09310 2cd31e21e8200304c6d61c23c6fa5919 331 SUPERFAMILY SSF53850 89 298 1.54E-45 T 22-04-2016 RPIC12D_RS09310 2cd31e21e8200304c6d61c23c6fa5919 331 PANTHER PTHR30537 1 310 1.5E-115 T 22-04-2016 RPIC12D_RS09310 2cd31e21e8200304c6d61c23c6fa5919 331 Pfam PF03466 LysR substrate binding domain 88 293 2.1E-43 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS09310 2cd31e21e8200304c6d61c23c6fa5919 331 Gene3D G3DSA:1.10.10.10 2 85 2.3E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS09310 2cd31e21e8200304c6d61c23c6fa5919 331 SUPERFAMILY SSF46785 2 112 1.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS09310 2cd31e21e8200304c6d61c23c6fa5919 331 PANTHER PTHR30537:SF21 1 310 1.5E-115 T 22-04-2016 RPIC12D_RS09310 2cd31e21e8200304c6d61c23c6fa5919 331 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.5E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS09310 2cd31e21e8200304c6d61c23c6fa5919 331 Gene3D G3DSA:3.40.190.10 93 176 1.2E-23 T 22-04-2016 RPIC12D_RS04715 d753fd7e7142ca32ac222806454b8666 346 Gene3D G3DSA:3.40.50.2300 55 172 2.3E-56 T 22-04-2016 RPIC12D_RS04715 d753fd7e7142ca32ac222806454b8666 346 SUPERFAMILY SSF47413 1 59 2.02E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS04715 d753fd7e7142ca32ac222806454b8666 346 PANTHER PTHR30146:SF30 1 343 2.3E-135 T 22-04-2016 RPIC12D_RS04715 d753fd7e7142ca32ac222806454b8666 346 SMART SM00354 1 71 1.2E-31 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC12D_RS04715 d753fd7e7142ca32ac222806454b8666 346 PANTHER PTHR30146 1 343 2.3E-135 T 22-04-2016 RPIC12D_RS04715 d753fd7e7142ca32ac222806454b8666 346 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC12D_RS04715 d753fd7e7142ca32ac222806454b8666 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC12D_RS04715 d753fd7e7142ca32ac222806454b8666 346 Gene3D G3DSA:3.40.50.2300 173 308 5.3E-54 T 22-04-2016 RPIC12D_RS04715 d753fd7e7142ca32ac222806454b8666 346 SUPERFAMILY SSF53822 60 339 3.37E-90 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS04715 d753fd7e7142ca32ac222806454b8666 346 Gene3D G3DSA:1.10.260.40 2 54 7.7E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS04715 d753fd7e7142ca32ac222806454b8666 346 Pfam PF13377 Periplasmic binding protein-like domain 169 336 1.9E-39 T 22-04-2016 RPIC12D_RS04715 d753fd7e7142ca32ac222806454b8666 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC12D_RS04715 d753fd7e7142ca32ac222806454b8666 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC12D_RS08860 112e33f2fce8328012e36b9ee0b5fafd 499 PANTHER PTHR23023:SF119 45 111 1.3E-81 T 22-04-2016 RPIC12D_RS08860 112e33f2fce8328012e36b9ee0b5fafd 499 PANTHER PTHR23023:SF119 128 379 1.3E-81 T 22-04-2016 RPIC12D_RS08860 112e33f2fce8328012e36b9ee0b5fafd 499 Gene3D G3DSA:3.50.50.60 192 357 5.7E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS08860 112e33f2fce8328012e36b9ee0b5fafd 499 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 189 198 9.0E-9 T 22-04-2016 RPIC12D_RS08860 112e33f2fce8328012e36b9ee0b5fafd 499 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 49 71 9.0E-9 T 22-04-2016 RPIC12D_RS08860 112e33f2fce8328012e36b9ee0b5fafd 499 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 256 9.0E-9 T 22-04-2016 RPIC12D_RS08860 112e33f2fce8328012e36b9ee0b5fafd 499 SUPERFAMILY SSF51905 49 435 3.56E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS08860 112e33f2fce8328012e36b9ee0b5fafd 499 Pfam PF01494 FAD binding domain 49 98 2.0E-5 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 RPIC12D_RS08860 112e33f2fce8328012e36b9ee0b5fafd 499 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 131 266 9.7E-13 T 22-04-2016 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase RPIC12D_RS08860 112e33f2fce8328012e36b9ee0b5fafd 499 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 249 2.9E-5 T 22-04-2016 RPIC12D_RS08860 112e33f2fce8328012e36b9ee0b5fafd 499 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 50 69 2.9E-5 T 22-04-2016 RPIC12D_RS08860 112e33f2fce8328012e36b9ee0b5fafd 499 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 186 204 2.9E-5 T 22-04-2016 RPIC12D_RS08860 112e33f2fce8328012e36b9ee0b5fafd 499 PANTHER PTHR23023 45 111 1.3E-81 T 22-04-2016 RPIC12D_RS08860 112e33f2fce8328012e36b9ee0b5fafd 499 PANTHER PTHR23023 128 379 1.3E-81 T 22-04-2016 RPIC12D_RS08860 112e33f2fce8328012e36b9ee0b5fafd 499 Gene3D G3DSA:3.50.50.60 127 191 1.1E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS08860 112e33f2fce8328012e36b9ee0b5fafd 499 Gene3D G3DSA:3.50.50.60 48 95 1.1E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS12740 e33d1269d0125caf060e3fa640765704 376 Gene3D G3DSA:3.30.70.270 216 371 1.7E-49 T 22-04-2016 RPIC12D_RS12740 e33d1269d0125caf060e3fa640765704 376 SUPERFAMILY SSF55781 53 204 6.98E-20 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS12740 e33d1269d0125caf060e3fa640765704 376 SUPERFAMILY SSF55073 220 370 8.63E-44 T 22-04-2016 IPR029787 Nucleotide cyclase RPIC12D_RS12740 e33d1269d0125caf060e3fa640765704 376 Pfam PF00990 Diguanylate cyclase, GGDEF domain 215 368 4.8E-44 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS12740 e33d1269d0125caf060e3fa640765704 376 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 214 370 2.8E-39 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS12740 e33d1269d0125caf060e3fa640765704 376 SMART SM00267 204 375 3.8E-56 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS12740 e33d1269d0125caf060e3fa640765704 376 Gene3D G3DSA:3.30.450.40 50 204 3.1E-20 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS12740 e33d1269d0125caf060e3fa640765704 376 PANTHER PTHR10799:SF774 177 367 6.6E-29 T 22-04-2016 RPIC12D_RS12740 e33d1269d0125caf060e3fa640765704 376 PANTHER PTHR10799 177 367 6.6E-29 T 22-04-2016 RPIC12D_RS12740 e33d1269d0125caf060e3fa640765704 376 Pfam PF13185 GAF domain 66 199 8.8E-16 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC12D_RS12740 e33d1269d0125caf060e3fa640765704 376 SMART SM00065 67 210 5.3E-6 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC12D_RS04410 fcac7f2b24700010473bef1f3fbf9514 219 PANTHER PTHR11046:SF1 24 202 1.1E-106 T 22-04-2016 RPIC12D_RS04410 fcac7f2b24700010473bef1f3fbf9514 219 Hamap MF_00045 Oligoribonuclease [orn]. 25 203 44.079 T 22-04-2016 IPR022894 Oligoribonuclease GO:0016788 RPIC12D_RS04410 fcac7f2b24700010473bef1f3fbf9514 219 PANTHER PTHR11046 24 202 1.1E-106 T 22-04-2016 RPIC12D_RS04410 fcac7f2b24700010473bef1f3fbf9514 219 SUPERFAMILY SSF53098 26 201 4.64E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS04410 fcac7f2b24700010473bef1f3fbf9514 219 Pfam PF00929 Exonuclease 31 192 1.3E-34 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIC12D_RS04410 fcac7f2b24700010473bef1f3fbf9514 219 SMART SM00479 29 202 1.3E-24 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIC12D_RS04410 fcac7f2b24700010473bef1f3fbf9514 219 Gene3D G3DSA:3.30.420.10 26 201 1.9E-75 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS07535 26c7a4fcdf35e91d781e736f14935d63 326 Gene3D G3DSA:3.40.50.2300 31 159 3.9E-56 T 22-04-2016 RPIC12D_RS07535 26c7a4fcdf35e91d781e736f14935d63 326 SUPERFAMILY SSF53822 40 287 1.18E-17 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS07535 26c7a4fcdf35e91d781e736f14935d63 326 PANTHER PTHR35271 1 326 1.1E-72 T 22-04-2016 RPIC12D_RS07535 26c7a4fcdf35e91d781e736f14935d63 326 Pfam PF04392 ABC transporter substrate binding protein 34 324 5.5E-105 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein RPIC12D_RS07535 26c7a4fcdf35e91d781e736f14935d63 326 Gene3D G3DSA:3.40.50.2300 160 290 1.1E-51 T 22-04-2016 RPIC12D_RS10005 822b3b829064b382fac836c8ed564d9f 305 Pfam PF00892 EamA-like transporter family 170 301 4.0E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS10005 822b3b829064b382fac836c8ed564d9f 305 Pfam PF00892 EamA-like transporter family 19 153 3.8E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS10005 822b3b829064b382fac836c8ed564d9f 305 PANTHER PTHR12715:SF5 19 304 5.0E-72 T 22-04-2016 RPIC12D_RS10005 822b3b829064b382fac836c8ed564d9f 305 PANTHER PTHR12715 19 304 5.0E-72 T 22-04-2016 RPIC12D_RS10005 822b3b829064b382fac836c8ed564d9f 305 SUPERFAMILY SSF103481 53 156 3.4E-13 T 22-04-2016 RPIC12D_RS10005 822b3b829064b382fac836c8ed564d9f 305 SUPERFAMILY SSF103481 209 304 1.57E-13 T 22-04-2016 RPIC12D_RS14730 eddff9a8f3842cac3dd743b23e83b93f 264 Gene3D G3DSA:3.30.300.20 17 107 1.8E-31 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RPIC12D_RS14730 eddff9a8f3842cac3dd743b23e83b93f 264 Gene3D G3DSA:3.30.1140.32 108 206 1.2E-45 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14730 eddff9a8f3842cac3dd743b23e83b93f 264 SUPERFAMILY SSF54821 108 206 1.83E-39 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14730 eddff9a8f3842cac3dd743b23e83b93f 264 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 3.8E-92 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS14730 eddff9a8f3842cac3dd743b23e83b93f 264 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.561 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS14730 eddff9a8f3842cac3dd743b23e83b93f 264 Pfam PF07650 KH domain 38 110 3.6E-21 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 RPIC12D_RS14730 eddff9a8f3842cac3dd743b23e83b93f 264 SUPERFAMILY SSF54814 2 106 1.86E-36 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RPIC12D_RS14730 eddff9a8f3842cac3dd743b23e83b93f 264 PANTHER PTHR11760:SF19 2 236 1.9E-127 T 22-04-2016 RPIC12D_RS14730 eddff9a8f3842cac3dd743b23e83b93f 264 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site RPIC12D_RS14730 eddff9a8f3842cac3dd743b23e83b93f 264 PANTHER PTHR11760 2 236 1.9E-127 T 22-04-2016 RPIC12D_RS14730 eddff9a8f3842cac3dd743b23e83b93f 264 SMART SM00322 60 125 7.3E-8 T 22-04-2016 IPR004087 K Homology domain GO:0003676 RPIC12D_RS14730 eddff9a8f3842cac3dd743b23e83b93f 264 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.2E-40 T 22-04-2016 RPIC12D_RS02650 819f4e5fd59e738b492851d6729d6dc8 305 SUPERFAMILY SSF53850 95 297 3.08E-46 T 22-04-2016 RPIC12D_RS02650 819f4e5fd59e738b492851d6729d6dc8 305 PANTHER PTHR30419 1 298 1.6E-97 T 22-04-2016 RPIC12D_RS02650 819f4e5fd59e738b492851d6729d6dc8 305 SUPERFAMILY SSF46785 4 115 9.72E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS02650 819f4e5fd59e738b492851d6729d6dc8 305 Gene3D G3DSA:3.40.190.10 180 266 1.6E-22 T 22-04-2016 RPIC12D_RS02650 819f4e5fd59e738b492851d6729d6dc8 305 PANTHER PTHR30419:SF0 1 298 1.6E-97 T 22-04-2016 RPIC12D_RS02650 819f4e5fd59e738b492851d6729d6dc8 305 Pfam PF03466 LysR substrate binding domain 95 295 2.0E-46 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS02650 819f4e5fd59e738b492851d6729d6dc8 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS02650 819f4e5fd59e738b492851d6729d6dc8 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS02650 819f4e5fd59e738b492851d6729d6dc8 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS02650 819f4e5fd59e738b492851d6729d6dc8 305 Gene3D G3DSA:3.40.190.10 94 179 1.8E-25 T 22-04-2016 RPIC12D_RS02650 819f4e5fd59e738b492851d6729d6dc8 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 6.8E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS02650 819f4e5fd59e738b492851d6729d6dc8 305 Gene3D G3DSA:1.10.10.10 5 89 8.2E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS11805 f91a80192971bf722c1997f4b0ca77b0 321 Gene3D G3DSA:3.40.190.10 81 196 7.4E-22 T 22-04-2016 RPIC12D_RS11805 f91a80192971bf722c1997f4b0ca77b0 321 Gene3D G3DSA:1.10.10.10 1 80 4.5E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS11805 f91a80192971bf722c1997f4b0ca77b0 321 Gene3D G3DSA:3.40.190.10 197 261 2.5E-8 T 22-04-2016 RPIC12D_RS11805 f91a80192971bf722c1997f4b0ca77b0 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.6E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS11805 f91a80192971bf722c1997f4b0ca77b0 321 Pfam PF03466 LysR substrate binding domain 89 292 1.3E-29 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS11805 f91a80192971bf722c1997f4b0ca77b0 321 SUPERFAMILY SSF46785 1 110 4.79E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS11805 f91a80192971bf722c1997f4b0ca77b0 321 SUPERFAMILY SSF53850 90 295 9.05E-30 T 22-04-2016 RPIC12D_RS11805 f91a80192971bf722c1997f4b0ca77b0 321 PANTHER PTHR30427 1 312 1.0E-61 T 22-04-2016 RPIC12D_RS10140 80af92100b0d18189b9b8c67edd39ef1 232 PIRSF PIRSF006232 1 230 9.2E-54 T 22-04-2016 IPR012093 Pirin RPIC12D_RS10140 80af92100b0d18189b9b8c67edd39ef1 232 PANTHER PTHR13903:SF7 1 232 5.7E-116 T 22-04-2016 RPIC12D_RS10140 80af92100b0d18189b9b8c67edd39ef1 232 Gene3D G3DSA:2.60.120.10 3 231 3.9E-76 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS10140 80af92100b0d18189b9b8c67edd39ef1 232 SUPERFAMILY SSF51182 1 231 1.8E-77 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS10140 80af92100b0d18189b9b8c67edd39ef1 232 PANTHER PTHR13903 1 232 5.7E-116 T 22-04-2016 IPR012093 Pirin RPIC12D_RS10140 80af92100b0d18189b9b8c67edd39ef1 232 Pfam PF02678 Pirin 9 119 1.5E-36 T 22-04-2016 IPR003829 Pirin, N-terminal domain RPIC12D_RS00770 1aa093874a18d54b1104cb2b6d5eef70 346 Gene3D G3DSA:3.20.20.330 11 344 4.7E-120 T 22-04-2016 IPR003726 Homocysteine-binding domain RPIC12D_RS00770 1aa093874a18d54b1104cb2b6d5eef70 346 PANTHER PTHR21091 16 333 2.2E-157 T 22-04-2016 RPIC12D_RS00770 1aa093874a18d54b1104cb2b6d5eef70 346 SUPERFAMILY SSF82282 13 342 2.35E-102 T 22-04-2016 IPR003726 Homocysteine-binding domain RPIC12D_RS00770 1aa093874a18d54b1104cb2b6d5eef70 346 Pfam PF02574 Homocysteine S-methyltransferase 22 330 1.8E-92 T 22-04-2016 IPR003726 Homocysteine-binding domain RPIC12D_RS00770 1aa093874a18d54b1104cb2b6d5eef70 346 PANTHER PTHR21091:SF112 16 333 2.2E-157 T 22-04-2016 RPIC12D_RS07270 7f162c51944e12ff4a0fa2d010470423 312 PANTHER PTHR30126:SF3 8 309 5.3E-50 T 22-04-2016 RPIC12D_RS07270 7f162c51944e12ff4a0fa2d010470423 312 Gene3D G3DSA:3.40.190.10 99 203 2.6E-23 T 22-04-2016 RPIC12D_RS07270 7f162c51944e12ff4a0fa2d010470423 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 6.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07270 7f162c51944e12ff4a0fa2d010470423 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 6.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07270 7f162c51944e12ff4a0fa2d010470423 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 6.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07270 7f162c51944e12ff4a0fa2d010470423 312 Pfam PF03466 LysR substrate binding domain 95 305 6.7E-28 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS07270 7f162c51944e12ff4a0fa2d010470423 312 Gene3D G3DSA:1.10.10.10 9 94 1.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07270 7f162c51944e12ff4a0fa2d010470423 312 SUPERFAMILY SSF46785 8 117 7.89E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07270 7f162c51944e12ff4a0fa2d010470423 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 9.6E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07270 7f162c51944e12ff4a0fa2d010470423 312 PANTHER PTHR30126 8 309 5.3E-50 T 22-04-2016 RPIC12D_RS07270 7f162c51944e12ff4a0fa2d010470423 312 SUPERFAMILY SSF53850 99 310 4.95E-29 T 22-04-2016 RPIC12D_RS03405 a75d658e905491d91ee82adae9b7404b 960 Gene3D G3DSA:3.40.50.300 528 601 3.6E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03405 a75d658e905491d91ee82adae9b7404b 960 Gene3D G3DSA:3.40.50.300 733 864 3.6E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03405 a75d658e905491d91ee82adae9b7404b 960 SUPERFAMILY SSF52540 646 898 1.83E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03405 a75d658e905491d91ee82adae9b7404b 960 SUPERFAMILY SSF52540 482 610 1.83E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03405 a75d658e905491d91ee82adae9b7404b 960 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 65 338 1.4E-74 T 22-04-2016 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase RPIC12D_RS03405 a75d658e905491d91ee82adae9b7404b 960 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 54 949 0.0 T 22-04-2016 IPR022303 Conjugative transfer ATPase RPIC12D_RS07125 2cf8246812514269c1e7cc964ac1e3f8 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.9E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07125 2cf8246812514269c1e7cc964ac1e3f8 321 SUPERFAMILY SSF53850 90 296 9.59E-37 T 22-04-2016 RPIC12D_RS07125 2cf8246812514269c1e7cc964ac1e3f8 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.9E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07125 2cf8246812514269c1e7cc964ac1e3f8 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.9E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07125 2cf8246812514269c1e7cc964ac1e3f8 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.9E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07125 2cf8246812514269c1e7cc964ac1e3f8 321 Pfam PF03466 LysR substrate binding domain 90 293 1.8E-35 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS07125 2cf8246812514269c1e7cc964ac1e3f8 321 Gene3D G3DSA:1.10.10.10 4 83 5.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07125 2cf8246812514269c1e7cc964ac1e3f8 321 Gene3D G3DSA:3.40.190.10 183 259 2.1E-7 T 22-04-2016 RPIC12D_RS07125 2cf8246812514269c1e7cc964ac1e3f8 321 Gene3D G3DSA:3.40.190.10 94 182 9.7E-15 T 22-04-2016 RPIC12D_RS07125 2cf8246812514269c1e7cc964ac1e3f8 321 SUPERFAMILY SSF46785 5 112 4.06E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07125 2cf8246812514269c1e7cc964ac1e3f8 321 PANTHER PTHR30537 1 311 1.2E-84 T 22-04-2016 RPIC12D_RS02240 be7ae89b99e9a012bece9bb69a33a985 567 PANTHER PTHR23508 20 345 2.0E-229 T 22-04-2016 RPIC12D_RS02240 be7ae89b99e9a012bece9bb69a33a985 567 PANTHER PTHR23508 466 566 2.0E-229 T 22-04-2016 RPIC12D_RS02240 be7ae89b99e9a012bece9bb69a33a985 567 Pfam PF00083 Sugar (and other) transporter 29 240 5.5E-28 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RPIC12D_RS02240 be7ae89b99e9a012bece9bb69a33a985 567 Pfam PF00083 Sugar (and other) transporter 459 562 3.3E-5 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RPIC12D_RS02240 be7ae89b99e9a012bece9bb69a33a985 567 SUPERFAMILY SSF103473 468 562 6.1E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS02240 be7ae89b99e9a012bece9bb69a33a985 567 SUPERFAMILY SSF103473 20 344 6.1E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS02240 be7ae89b99e9a012bece9bb69a33a985 567 PANTHER PTHR23508:SF7 20 345 2.0E-229 T 22-04-2016 RPIC12D_RS02240 be7ae89b99e9a012bece9bb69a33a985 567 PANTHER PTHR23508:SF7 466 566 2.0E-229 T 22-04-2016 RPIC12D_RS02240 be7ae89b99e9a012bece9bb69a33a985 567 Gene3D G3DSA:1.20.1250.20 25 231 2.7E-24 T 22-04-2016 RPIC12D_RS02240 be7ae89b99e9a012bece9bb69a33a985 567 Gene3D G3DSA:1.20.1250.20 255 343 4.2E-25 T 22-04-2016 RPIC12D_RS02240 be7ae89b99e9a012bece9bb69a33a985 567 Gene3D G3DSA:1.20.1250.20 464 558 4.2E-25 T 22-04-2016 RPIC12D_RS02240 be7ae89b99e9a012bece9bb69a33a985 567 ProSitePatterns PS00217 Sugar transport proteins signature 2. 137 162 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS06605 7147d0992fe55a1b1d0cda8f07dd4861 645 ProSitePatterns PS00211 ABC transporters family signature. 437 451 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS06605 7147d0992fe55a1b1d0cda8f07dd4861 645 Pfam PF16326 ABC transporter C-terminal domain 574 639 2.2E-11 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 RPIC12D_RS06605 7147d0992fe55a1b1d0cda8f07dd4861 645 SUPERFAMILY SSF52540 119 253 1.87E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06605 7147d0992fe55a1b1d0cda8f07dd4861 645 SUPERFAMILY SSF52540 2 92 1.87E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06605 7147d0992fe55a1b1d0cda8f07dd4861 645 PANTHER PTHR19211 2 567 0.0 T 22-04-2016 RPIC12D_RS06605 7147d0992fe55a1b1d0cda8f07dd4861 645 SUPERFAMILY SSF52540 300 519 3.31E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06605 7147d0992fe55a1b1d0cda8f07dd4861 645 Pfam PF00005 ABC transporter 18 178 3.0E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS06605 7147d0992fe55a1b1d0cda8f07dd4861 645 Pfam PF00005 ABC transporter 334 465 2.2E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS06605 7147d0992fe55a1b1d0cda8f07dd4861 645 Gene3D G3DSA:3.40.50.300 1 266 4.6E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06605 7147d0992fe55a1b1d0cda8f07dd4861 645 Gene3D G3DSA:3.40.50.300 310 527 1.1E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06605 7147d0992fe55a1b1d0cda8f07dd4861 645 SMART SM00382 26 225 8.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS06605 7147d0992fe55a1b1d0cda8f07dd4861 645 SMART SM00382 343 510 1.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS06605 7147d0992fe55a1b1d0cda8f07dd4861 645 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS06605 7147d0992fe55a1b1d0cda8f07dd4861 645 PANTHER PTHR19211:SF49 2 567 0.0 T 22-04-2016 RPIC12D_RS06605 7147d0992fe55a1b1d0cda8f07dd4861 645 Pfam PF12848 ABC transporter 217 292 5.8E-28 T 22-04-2016 IPR032781 ABC-transporter extension domain RPIC12D_RS07630 ab27f493bd07756cb50298113bfcd1d7 278 PANTHER PTHR30193:SF20 16 271 3.0E-79 T 22-04-2016 RPIC12D_RS07630 ab27f493bd07756cb50298113bfcd1d7 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 267 1.6E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS07630 ab27f493bd07756cb50298113bfcd1d7 278 SUPERFAMILY SSF161098 17 271 3.27E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS07630 ab27f493bd07756cb50298113bfcd1d7 278 Gene3D G3DSA:1.10.3720.10 22 273 4.2E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS07630 ab27f493bd07756cb50298113bfcd1d7 278 PANTHER PTHR30193 16 271 3.0E-79 T 22-04-2016 RPIC12D_RS14975 3c4b1881229614ea7b9e6aeca8361bee 276 SUPERFAMILY SSF161098 9 275 5.14E-63 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS14975 3c4b1881229614ea7b9e6aeca8361bee 276 Gene3D G3DSA:1.10.3720.10 2 263 3.8E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS14975 3c4b1881229614ea7b9e6aeca8361bee 276 PANTHER PTHR32243 3 276 1.8E-87 T 22-04-2016 RPIC12D_RS14975 3c4b1881229614ea7b9e6aeca8361bee 276 PANTHER PTHR32243:SF18 3 276 1.8E-87 T 22-04-2016 RPIC12D_RS14975 3c4b1881229614ea7b9e6aeca8361bee 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 267 6.3E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 SMART SM00052 659 904 4.3E-112 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 Pfam PF00989 PAS fold 41 150 2.0E-8 T 22-04-2016 IPR013767 PAS fold GO:0006355 RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 Pfam PF13185 GAF domain 197 339 9.0E-12 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 Gene3D G3DSA:3.30.450.40 186 351 1.3E-16 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 Pfam PF00563 EAL domain 667 899 6.3E-70 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 SMART SM00065 196 348 2.1E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 SMART SM00091 40 106 2.3E-7 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 SMART SM00091 352 418 0.014 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 40 160 2.5E-13 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 Pfam PF13188 PAS domain 352 386 1.4E-4 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 SUPERFAMILY SSF55781 198 351 1.83E-21 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 Gene3D G3DSA:3.30.450.20 44 172 4.5E-16 T 22-04-2016 RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 482 648 6.4E-46 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 SUPERFAMILY SSF55785 57 162 7.93E-16 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 PANTHER PTHR10799:SF774 398 759 7.1E-98 T 22-04-2016 RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 SUPERFAMILY SSF141868 666 911 9.02E-85 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 PANTHER PTHR10799 398 759 7.1E-98 T 22-04-2016 RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 SUPERFAMILY SSF55785 343 471 1.92E-14 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 Gene3D G3DSA:3.20.20.450 662 911 1.7E-93 T 22-04-2016 IPR001633 EAL domain RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 Pfam PF00990 Diguanylate cyclase, GGDEF domain 485 645 1.1E-51 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 SMART SM00267 474 649 8.2E-70 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 Gene3D G3DSA:3.30.450.20 352 471 8.0E-14 T 22-04-2016 RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 SUPERFAMILY SSF55073 490 650 4.45E-53 T 22-04-2016 IPR029787 Nucleotide cyclase RPIC12D_RS02470 6fa45c5e57674aeaa5d2ca2b30d28b2c 917 Gene3D G3DSA:3.30.70.270 487 657 5.3E-62 T 22-04-2016 RPIC12D_RS07825 2f41da5d678f28316ee4dbb2859a0350 259 PANTHER PTHR30040 6 242 3.2E-28 T 22-04-2016 RPIC12D_RS07825 2f41da5d678f28316ee4dbb2859a0350 259 Pfam PF02424 ApbE family 13 248 1.6E-30 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 RPIC12D_RS07825 2f41da5d678f28316ee4dbb2859a0350 259 SUPERFAMILY SSF143631 6 255 1.03E-46 T 22-04-2016 IPR003374 ApbE-like domain RPIC12D_RS07825 2f41da5d678f28316ee4dbb2859a0350 259 PANTHER PTHR30040:SF2 6 242 3.2E-28 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 RPIC12D_RS03935 48b662f084c73cfaf80023be29e85946 427 PANTHER PTHR35008 27 424 8.2E-128 T 22-04-2016 RPIC12D_RS03935 48b662f084c73cfaf80023be29e85946 427 PRINTS PR00605 Class IC cytochrome C signature 381 403 2.4E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RPIC12D_RS03935 48b662f084c73cfaf80023be29e85946 427 PRINTS PR00605 Class IC cytochrome C signature 330 341 2.4E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RPIC12D_RS03935 48b662f084c73cfaf80023be29e85946 427 SUPERFAMILY SSF46626 18 131 1.09E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS03935 48b662f084c73cfaf80023be29e85946 427 Pfam PF00034 Cytochrome c 32 130 5.3E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS03935 48b662f084c73cfaf80023be29e85946 427 Pfam PF00034 Cytochrome c 189 289 2.5E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS03935 48b662f084c73cfaf80023be29e85946 427 Gene3D G3DSA:1.10.760.10 28 131 1.2E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS03935 48b662f084c73cfaf80023be29e85946 427 Gene3D G3DSA:1.10.760.10 176 288 1.7E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS03935 48b662f084c73cfaf80023be29e85946 427 SUPERFAMILY SSF46626 176 289 5.57E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS03935 48b662f084c73cfaf80023be29e85946 427 PANTHER PTHR35008:SF3 27 424 8.2E-128 T 22-04-2016 RPIC12D_RS03935 48b662f084c73cfaf80023be29e85946 427 PIRSF PIRSF000018 1 427 1.9E-177 T 22-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 RPIC12D_RS03935 48b662f084c73cfaf80023be29e85946 427 SUPERFAMILY SSF46626 323 414 4.19E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS03935 48b662f084c73cfaf80023be29e85946 427 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 324 403 1.5E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS03935 48b662f084c73cfaf80023be29e85946 427 Gene3D G3DSA:1.10.760.10 326 425 6.7E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS00635 6e65aaf5496e64e435412ed6b3f1baec 146 Gene3D G3DSA:3.10.450.50 14 144 5.5E-45 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS00635 6e65aaf5496e64e435412ed6b3f1baec 146 SUPERFAMILY SSF54427 34 144 4.38E-34 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS00635 6e65aaf5496e64e435412ed6b3f1baec 146 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 11 143 30.144 T 22-04-2016 IPR023006 Uncharacterised protein family UPF0225 RPIC12D_RS15930 ea857ecc911b84436ced79931e99fa44 293 Gene3D G3DSA:3.40.190.10 89 181 2.4E-10 T 22-04-2016 RPIC12D_RS15930 ea857ecc911b84436ced79931e99fa44 293 Pfam PF03466 LysR substrate binding domain 95 290 6.2E-24 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS15930 ea857ecc911b84436ced79931e99fa44 293 SUPERFAMILY SSF53850 96 290 9.05E-27 T 22-04-2016 RPIC12D_RS15930 ea857ecc911b84436ced79931e99fa44 293 PANTHER PTHR30579:SF3 4 291 5.8E-66 T 22-04-2016 RPIC12D_RS15930 ea857ecc911b84436ced79931e99fa44 293 PANTHER PTHR30579 4 291 5.8E-66 T 22-04-2016 RPIC12D_RS15930 ea857ecc911b84436ced79931e99fa44 293 Gene3D G3DSA:1.10.10.10 12 88 5.5E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS15930 ea857ecc911b84436ced79931e99fa44 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 62 2.0E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS15930 ea857ecc911b84436ced79931e99fa44 293 Gene3D G3DSA:3.40.190.10 218 259 8.5E-5 T 22-04-2016 RPIC12D_RS15930 ea857ecc911b84436ced79931e99fa44 293 SUPERFAMILY SSF46785 5 118 7.44E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS09575 c80ecfc1c62734a32b2e6f8d4b93cdd9 290 PANTHER PTHR15362 38 180 7.9E-33 T 22-04-2016 RPIC12D_RS09575 c80ecfc1c62734a32b2e6f8d4b93cdd9 290 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 88 110 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RPIC12D_RS09575 c80ecfc1c62734a32b2e6f8d4b93cdd9 290 Pfam PF01066 CDP-alcohol phosphatidyltransferase 47 110 3.0E-13 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RPIC12D_RS09575 c80ecfc1c62734a32b2e6f8d4b93cdd9 290 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 54 190 9.0E-34 T 22-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 RPIC12D_RS03140 a24ad338fe95949bf22e13e975936d79 93 Pfam PF12728 Helix-turn-helix domain 9 57 1.9E-18 T 22-04-2016 RPIC12D_RS03140 a24ad338fe95949bf22e13e975936d79 93 SUPERFAMILY SSF46955 9 57 1.43E-9 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC12D_RS03140 a24ad338fe95949bf22e13e975936d79 93 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 9 54 5.2E-16 T 22-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 RPIC12D_RS03140 a24ad338fe95949bf22e13e975936d79 93 Gene3D G3DSA:1.10.10.10 10 65 5.0E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06965 46a75a95d4d250e0071f809b43a330a6 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 3.2E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06965 46a75a95d4d250e0071f809b43a330a6 300 PANTHER PTHR30537 1 297 9.5E-162 T 22-04-2016 RPIC12D_RS06965 46a75a95d4d250e0071f809b43a330a6 300 Gene3D G3DSA:3.40.190.10 174 261 2.1E-24 T 22-04-2016 RPIC12D_RS06965 46a75a95d4d250e0071f809b43a330a6 300 Gene3D G3DSA:3.40.190.10 90 173 1.0E-8 T 22-04-2016 RPIC12D_RS06965 46a75a95d4d250e0071f809b43a330a6 300 SUPERFAMILY SSF53850 90 294 5.61E-44 T 22-04-2016 RPIC12D_RS06965 46a75a95d4d250e0071f809b43a330a6 300 Pfam PF03466 LysR substrate binding domain 88 293 4.6E-41 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS06965 46a75a95d4d250e0071f809b43a330a6 300 Gene3D G3DSA:1.10.10.10 4 79 5.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06965 46a75a95d4d250e0071f809b43a330a6 300 SUPERFAMILY SSF46785 6 109 4.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06965 46a75a95d4d250e0071f809b43a330a6 300 PANTHER PTHR30537:SF13 1 297 9.5E-162 T 22-04-2016 RPIC12D_RS14550 59f95afedfa2811d99251f87be83ef66 114 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 6 110 1.1E-34 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RPIC12D_RS14550 59f95afedfa2811d99251f87be83ef66 114 Gene3D G3DSA:3.30.920.10 4 111 1.5E-27 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RPIC12D_RS14550 59f95afedfa2811d99251f87be83ef66 114 ProSitePatterns PS01344 Frataxin family signature. 55 69 - T 22-04-2016 IPR020895 Frataxin conserved site RPIC12D_RS14550 59f95afedfa2811d99251f87be83ef66 114 Hamap MF_00142 Protein CyaY [cyaY]. 4 111 25.122 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RPIC12D_RS14550 59f95afedfa2811d99251f87be83ef66 114 PANTHER PTHR16821 1 111 1.3E-20 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RPIC12D_RS14550 59f95afedfa2811d99251f87be83ef66 114 SMART SM01219 4 112 2.0E-47 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RPIC12D_RS14550 59f95afedfa2811d99251f87be83ef66 114 SUPERFAMILY SSF55387 3 109 2.96E-31 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RPIC12D_RS14550 59f95afedfa2811d99251f87be83ef66 114 Pfam PF01491 Frataxin-like domain 4 107 1.8E-23 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RPIC12D_RS09865 45daffe77fe37360f2d59ab47f98cfa4 311 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 311 1.3E-71 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 RPIC12D_RS09865 45daffe77fe37360f2d59ab47f98cfa4 311 Pfam PF08340 Domain of unknown function (DUF1732) 227 311 2.8E-32 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 RPIC12D_RS09865 45daffe77fe37360f2d59ab47f98cfa4 311 PANTHER PTHR30636 1 311 2.6E-83 T 22-04-2016 RPIC12D_RS09865 45daffe77fe37360f2d59ab47f98cfa4 311 Pfam PF03755 YicC-like family, N-terminal region 2 165 9.7E-41 T 22-04-2016 IPR013527 YicC-like, N-terminal RPIC12D_RS08940 37239043d48d9654d6c13e4be385b313 673 Pfam PF00474 Sodium:solute symporter family 487 602 1.5E-21 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC12D_RS08940 37239043d48d9654d6c13e4be385b313 673 Pfam PF00474 Sodium:solute symporter family 59 222 7.9E-32 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC12D_RS08940 37239043d48d9654d6c13e4be385b313 673 ProSitePatterns PS00018 EF-hand calcium-binding domain. 458 470 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site RPIC12D_RS08940 37239043d48d9654d6c13e4be385b313 673 PANTHER PTHR11819:SF159 30 262 5.1E-154 T 22-04-2016 RPIC12D_RS08940 37239043d48d9654d6c13e4be385b313 673 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 34 672 1.8E-214 T 22-04-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily RPIC12D_RS08940 37239043d48d9654d6c13e4be385b313 673 PANTHER PTHR11819 30 262 5.1E-154 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC12D_RS08940 37239043d48d9654d6c13e4be385b313 673 PANTHER PTHR11819 458 672 5.1E-154 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC12D_RS08940 37239043d48d9654d6c13e4be385b313 673 PANTHER PTHR11819 350 428 5.1E-154 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC12D_RS08940 37239043d48d9654d6c13e4be385b313 673 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 584 604 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS08940 37239043d48d9654d6c13e4be385b313 673 PANTHER PTHR11819:SF159 350 428 5.1E-154 T 22-04-2016 RPIC12D_RS08940 37239043d48d9654d6c13e4be385b313 673 PANTHER PTHR11819:SF159 458 672 5.1E-154 T 22-04-2016 RPIC12D_RS02870 437c0c68e0524e2ae594df3862f83abc 183 PANTHER PTHR21047 3 181 1.9E-73 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RPIC12D_RS02870 437c0c68e0524e2ae594df3862f83abc 183 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 5 179 3.7E-82 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RPIC12D_RS02870 437c0c68e0524e2ae594df3862f83abc 183 Gene3D G3DSA:2.60.120.10 5 180 3.7E-80 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS02870 437c0c68e0524e2ae594df3862f83abc 183 PANTHER PTHR21047:SF2 3 181 1.9E-73 T 22-04-2016 RPIC12D_RS02870 437c0c68e0524e2ae594df3862f83abc 183 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 8 182 2.0E-73 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RPIC12D_RS02870 437c0c68e0524e2ae594df3862f83abc 183 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 8 177 1.1E-72 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RPIC12D_RS02870 437c0c68e0524e2ae594df3862f83abc 183 SUPERFAMILY SSF51182 5 180 2.27E-74 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS09870 93a5e7228e2469465a6012b0b44388a7 341 SUPERFAMILY SSF56112 21 296 8.63E-55 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC12D_RS09870 93a5e7228e2469465a6012b0b44388a7 341 PANTHER PTHR24362 81 303 4.1E-54 T 22-04-2016 RPIC12D_RS09870 93a5e7228e2469465a6012b0b44388a7 341 PANTHER PTHR24362 20 61 4.1E-54 T 22-04-2016 RPIC12D_RS09870 93a5e7228e2469465a6012b0b44388a7 341 Gene3D G3DSA:3.30.200.20 19 106 1.8E-15 T 22-04-2016 RPIC12D_RS09870 93a5e7228e2469465a6012b0b44388a7 341 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 166 178 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RPIC12D_RS09870 93a5e7228e2469465a6012b0b44388a7 341 Pfam PF00069 Protein kinase domain 24 289 1.3E-35 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RPIC12D_RS09870 93a5e7228e2469465a6012b0b44388a7 341 Gene3D G3DSA:1.10.510.10 107 298 9.4E-40 T 22-04-2016 RPIC12D_RS09870 93a5e7228e2469465a6012b0b44388a7 341 SMART SM00220 24 298 9.7E-32 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RPIC12D_RS11155 9414176a013c6d502dcc45d15c51aa40 502 Gene3D G3DSA:3.40.630.10 187 500 1.7E-140 T 22-04-2016 RPIC12D_RS11155 9414176a013c6d502dcc45d15c51aa40 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 24 145 2.1E-26 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RPIC12D_RS11155 9414176a013c6d502dcc45d15c51aa40 502 PANTHER PTHR11963 15 501 8.8E-208 T 22-04-2016 RPIC12D_RS11155 9414176a013c6d502dcc45d15c51aa40 502 SUPERFAMILY SSF53187 187 500 9.42E-126 T 22-04-2016 RPIC12D_RS11155 9414176a013c6d502dcc45d15c51aa40 502 PRINTS PR00481 Cytosol aminopeptidase signature 329 350 9.4E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RPIC12D_RS11155 9414176a013c6d502dcc45d15c51aa40 502 PRINTS PR00481 Cytosol aminopeptidase signature 292 313 9.4E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RPIC12D_RS11155 9414176a013c6d502dcc45d15c51aa40 502 PRINTS PR00481 Cytosol aminopeptidase signature 379 394 9.4E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RPIC12D_RS11155 9414176a013c6d502dcc45d15c51aa40 502 PRINTS PR00481 Cytosol aminopeptidase signature 270 287 9.4E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RPIC12D_RS11155 9414176a013c6d502dcc45d15c51aa40 502 PRINTS PR00481 Cytosol aminopeptidase signature 351 371 9.4E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RPIC12D_RS11155 9414176a013c6d502dcc45d15c51aa40 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 8 501 36.838 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 RPIC12D_RS11155 9414176a013c6d502dcc45d15c51aa40 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 194 494 4.9E-123 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RPIC12D_RS11155 9414176a013c6d502dcc45d15c51aa40 502 Gene3D G3DSA:3.40.220.10 1 170 2.4E-52 T 22-04-2016 RPIC12D_RS11155 9414176a013c6d502dcc45d15c51aa40 502 PANTHER PTHR11963:SF13 15 501 8.8E-208 T 22-04-2016 RPIC12D_RS11155 9414176a013c6d502dcc45d15c51aa40 502 SUPERFAMILY SSF52949 1 192 1.06E-38 T 22-04-2016 RPIC12D_RS11155 9414176a013c6d502dcc45d15c51aa40 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 355 362 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RPIC12D_RS10620 f004c0bf3f1daeb3703d8c4e01964d0b 303 PANTHER PTHR10983:SF15 1 294 9.9E-116 T 22-04-2016 RPIC12D_RS10620 f004c0bf3f1daeb3703d8c4e01964d0b 303 Pfam PF01553 Acyltransferase 77 230 9.5E-14 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RPIC12D_RS10620 f004c0bf3f1daeb3703d8c4e01964d0b 303 SMART SM00563 89 231 6.2E-18 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RPIC12D_RS10620 f004c0bf3f1daeb3703d8c4e01964d0b 303 SUPERFAMILY SSF69593 19 295 7.72E-35 T 22-04-2016 RPIC12D_RS10620 f004c0bf3f1daeb3703d8c4e01964d0b 303 PANTHER PTHR10983 1 294 9.9E-116 T 22-04-2016 RPIC12D_RS09670 1221b261aff1c23e57131143e95b2a00 282 PANTHER PTHR37945 29 279 2.1E-96 T 22-04-2016 RPIC12D_RS09670 1221b261aff1c23e57131143e95b2a00 282 Pfam PF12849 PBP superfamily domain 31 252 3.0E-26 T 22-04-2016 IPR024370 PBP domain RPIC12D_RS09670 1221b261aff1c23e57131143e95b2a00 282 Gene3D G3DSA:3.40.190.10 27 158 1.4E-34 T 22-04-2016 RPIC12D_RS09670 1221b261aff1c23e57131143e95b2a00 282 SUPERFAMILY SSF53850 28 262 6.09E-30 T 22-04-2016 RPIC12D_RS09670 1221b261aff1c23e57131143e95b2a00 282 Gene3D G3DSA:3.40.190.10 194 276 5.3E-24 T 22-04-2016 RPIC12D_RS04310 7f529165f7bcfb0db73435bda39ac442 249 PANTHER PTHR21294:SF8 1 249 9.6E-155 T 22-04-2016 RPIC12D_RS04310 7f529165f7bcfb0db73435bda39ac442 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 22-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 RPIC12D_RS04310 7f529165f7bcfb0db73435bda39ac442 249 PANTHER PTHR21294 1 249 9.6E-155 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 RPIC12D_RS04310 7f529165f7bcfb0db73435bda39ac442 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 4.8E-45 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RPIC12D_RS04310 7f529165f7bcfb0db73435bda39ac442 249 SUPERFAMILY SSF52402 1 242 2.16E-85 T 22-04-2016 RPIC12D_RS04310 7f529165f7bcfb0db73435bda39ac442 249 SMART SM00893 23 211 6.6E-68 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RPIC12D_RS04310 7f529165f7bcfb0db73435bda39ac442 249 Gene3D G3DSA:3.40.50.620 1 247 8.6E-104 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS04310 7f529165f7bcfb0db73435bda39ac442 249 PIRSF PIRSF000090 1 249 1.5E-84 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 RPIC12D_RS24820 1abcbcf561e8b500eb70b935b0752bc4 294 Pfam PF00675 Insulinase (Peptidase family M16) 82 225 9.8E-28 T 22-04-2016 IPR011765 Peptidase M16, N-terminal RPIC12D_RS24820 1abcbcf561e8b500eb70b935b0752bc4 294 PANTHER PTHR11851:SF136 69 292 2.0E-72 T 22-04-2016 RPIC12D_RS24820 1abcbcf561e8b500eb70b935b0752bc4 294 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 100 123 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 RPIC12D_RS24820 1abcbcf561e8b500eb70b935b0752bc4 294 PANTHER PTHR11851 69 292 2.0E-72 T 22-04-2016 RPIC12D_RS24820 1abcbcf561e8b500eb70b935b0752bc4 294 Gene3D G3DSA:3.30.830.10 66 289 1.9E-54 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RPIC12D_RS24820 1abcbcf561e8b500eb70b935b0752bc4 294 Pfam PF05193 Peptidase M16 inactive domain 234 283 5.9E-11 T 22-04-2016 IPR007863 Peptidase M16, C-terminal RPIC12D_RS24820 1abcbcf561e8b500eb70b935b0752bc4 294 SUPERFAMILY SSF63411 68 278 1.28E-58 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RPIC12D_RS25260 9805eec17a0d7775097401add9c3d025 334 PANTHER PTHR22594:SF5 1 35 6.2E-97 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RPIC12D_RS25260 9805eec17a0d7775097401add9c3d025 334 PANTHER PTHR22594 1 35 6.2E-97 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS25260 9805eec17a0d7775097401add9c3d025 334 Pfam PF02938 GAD domain 46 145 1.0E-27 T 22-04-2016 IPR029351 GAD domain RPIC12D_RS25260 9805eec17a0d7775097401add9c3d025 334 Gene3D G3DSA:3.30.1360.30 15 153 1.0E-44 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 RPIC12D_RS25260 9805eec17a0d7775097401add9c3d025 334 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 326 1.2E-120 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RPIC12D_RS25260 9805eec17a0d7775097401add9c3d025 334 PRINTS PR01042 Aspartyl-tRNA synthetase signature 262 276 2.6E-12 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS25260 9805eec17a0d7775097401add9c3d025 334 PRINTS PR01042 Aspartyl-tRNA synthetase signature 218 234 2.6E-12 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS25260 9805eec17a0d7775097401add9c3d025 334 SUPERFAMILY SSF55681 2 30 2.08E-50 T 22-04-2016 RPIC12D_RS25260 9805eec17a0d7775097401add9c3d025 334 SUPERFAMILY SSF55681 168 328 2.08E-50 T 22-04-2016 RPIC12D_RS25260 9805eec17a0d7775097401add9c3d025 334 SUPERFAMILY SSF55261 29 154 4.36E-43 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 RPIC12D_RS25260 9805eec17a0d7775097401add9c3d025 334 Gene3D G3DSA:3.30.930.10 154 328 1.5E-54 T 22-04-2016 RPIC12D_RS25260 9805eec17a0d7775097401add9c3d025 334 Gene3D G3DSA:3.30.930.10 2 14 1.5E-54 T 22-04-2016 RPIC12D_RS25260 9805eec17a0d7775097401add9c3d025 334 Pfam PF00152 tRNA synthetases class II (D, K and N) 2 302 5.6E-46 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS25260 9805eec17a0d7775097401add9c3d025 334 PANTHER PTHR22594:SF5 109 315 6.2E-97 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RPIC12D_RS25260 9805eec17a0d7775097401add9c3d025 334 PANTHER PTHR22594 109 315 6.2E-97 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS03050 667c2664b1c1cfb5049bb3131fd87b76 302 Gene3D G3DSA:3.40.190.10 90 174 1.6E-17 T 22-04-2016 RPIC12D_RS03050 667c2664b1c1cfb5049bb3131fd87b76 302 Pfam PF03466 LysR substrate binding domain 87 293 7.2E-33 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS03050 667c2664b1c1cfb5049bb3131fd87b76 302 SUPERFAMILY SSF53850 87 293 2.02E-33 T 22-04-2016 RPIC12D_RS03050 667c2664b1c1cfb5049bb3131fd87b76 302 Gene3D G3DSA:1.10.10.10 2 84 1.0E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS03050 667c2664b1c1cfb5049bb3131fd87b76 302 PANTHER PTHR30346 1 294 8.3E-76 T 22-04-2016 RPIC12D_RS03050 667c2664b1c1cfb5049bb3131fd87b76 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS03050 667c2664b1c1cfb5049bb3131fd87b76 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS03050 667c2664b1c1cfb5049bb3131fd87b76 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS03050 667c2664b1c1cfb5049bb3131fd87b76 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.7E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS03050 667c2664b1c1cfb5049bb3131fd87b76 302 SUPERFAMILY SSF46785 2 85 2.07E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS03050 667c2664b1c1cfb5049bb3131fd87b76 302 Gene3D G3DSA:3.40.190.10 175 265 1.8E-16 T 22-04-2016 RPIC12D_RS15165 3f30ccdb4002369aed28e0d7e2274a99 355 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 354 55.484 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RPIC12D_RS15165 3f30ccdb4002369aed28e0d7e2274a99 355 Pfam PF00155 Aminotransferase class I and II 27 350 2.1E-51 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC12D_RS15165 3f30ccdb4002369aed28e0d7e2274a99 355 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 351 4.8E-89 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RPIC12D_RS15165 3f30ccdb4002369aed28e0d7e2274a99 355 SUPERFAMILY SSF53383 4 353 4.7E-78 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS15165 3f30ccdb4002369aed28e0d7e2274a99 355 Gene3D G3DSA:3.40.640.10 38 255 8.0E-64 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS15165 3f30ccdb4002369aed28e0d7e2274a99 355 PANTHER PTHR11751:SF398 3 353 1.8E-115 T 22-04-2016 RPIC12D_RS15165 3f30ccdb4002369aed28e0d7e2274a99 355 PANTHER PTHR11751 3 353 1.8E-115 T 22-04-2016 RPIC12D_RS15165 3f30ccdb4002369aed28e0d7e2274a99 355 Gene3D G3DSA:3.90.1150.10 256 354 1.4E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS07515 e7422f88b0244befa80e3347b6170e13 128 SUPERFAMILY SSF51316 3 126 3.84E-61 T 22-04-2016 IPR011057 Mss4-like RPIC12D_RS07515 e7422f88b0244befa80e3347b6170e13 128 PANTHER PTHR10173 3 126 6.3E-68 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 RPIC12D_RS07515 e7422f88b0244befa80e3347b6170e13 128 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 6 128 37.006 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RPIC12D_RS07515 e7422f88b0244befa80e3347b6170e13 128 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 4 126 8.6E-61 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RPIC12D_RS07515 e7422f88b0244befa80e3347b6170e13 128 Gene3D G3DSA:2.170.150.20 2 126 8.2E-65 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RPIC12D_RS07515 e7422f88b0244befa80e3347b6170e13 128 PANTHER PTHR10173:SF18 3 126 6.3E-68 T 22-04-2016 RPIC12D_RS07515 e7422f88b0244befa80e3347b6170e13 128 Pfam PF01641 SelR domain 9 126 3.7E-56 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RPIC12D_RS14390 8571020a8bc6b4f6d3734a5f7ceb04c0 258 Pfam PF00977 Histidine biosynthesis protein 5 239 6.7E-90 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 RPIC12D_RS14390 8571020a8bc6b4f6d3734a5f7ceb04c0 258 Gene3D G3DSA:3.20.20.70 4 256 4.8E-108 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS14390 8571020a8bc6b4f6d3734a5f7ceb04c0 258 SUPERFAMILY SSF51366 1 255 7.38E-86 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RPIC12D_RS14390 8571020a8bc6b4f6d3734a5f7ceb04c0 258 PANTHER PTHR21235:SF2 1 258 1.9E-128 T 22-04-2016 RPIC12D_RS14390 8571020a8bc6b4f6d3734a5f7ceb04c0 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 255 49.411 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 RPIC12D_RS14390 8571020a8bc6b4f6d3734a5f7ceb04c0 258 PANTHER PTHR21235 1 258 1.9E-128 T 22-04-2016 RPIC12D_RS14390 8571020a8bc6b4f6d3734a5f7ceb04c0 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 255 4.1E-115 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 RPIC12D_RS04965 2b410ec616bccbfbdeec5260bb24de89 256 SUPERFAMILY SSF69065 2 154 1.27E-47 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RPIC12D_RS04965 2b410ec616bccbfbdeec5260bb24de89 256 Gene3D G3DSA:3.30.160.20 150 219 5.6E-24 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RPIC12D_RS04965 2b410ec616bccbfbdeec5260bb24de89 256 Pfam PF14622 Ribonuclease-III-like 17 138 4.6E-35 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RPIC12D_RS04965 2b410ec616bccbfbdeec5260bb24de89 256 Gene3D G3DSA:1.10.1520.10 2 145 2.1E-48 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RPIC12D_RS04965 2b410ec616bccbfbdeec5260bb24de89 256 SUPERFAMILY SSF54768 106 220 5.81E-25 T 22-04-2016 RPIC12D_RS04965 2b410ec616bccbfbdeec5260bb24de89 256 Hamap MF_00104 Ribonuclease 3 [rnc]. 6 217 28.813 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 RPIC12D_RS04965 2b410ec616bccbfbdeec5260bb24de89 256 Pfam PF00035 Double-stranded RNA binding motif 153 218 3.1E-12 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RPIC12D_RS04965 2b410ec616bccbfbdeec5260bb24de89 256 SMART SM00358 153 221 3.3E-14 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RPIC12D_RS04965 2b410ec616bccbfbdeec5260bb24de89 256 PANTHER PTHR11207 3 218 4.7E-78 T 22-04-2016 RPIC12D_RS04965 2b410ec616bccbfbdeec5260bb24de89 256 SMART SM00535 18 146 1.6E-50 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RPIC12D_RS04965 2b410ec616bccbfbdeec5260bb24de89 256 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 6 219 2.2E-71 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 RPIC12D_RS04965 2b410ec616bccbfbdeec5260bb24de89 256 ProSitePatterns PS00517 Ribonuclease III family signature. 35 43 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RPIC12D_RS05255 2c4ec611b592b37422195bc519a168f4 308 Gene3D G3DSA:3.40.190.10 91 175 7.1E-16 T 22-04-2016 RPIC12D_RS05255 2c4ec611b592b37422195bc519a168f4 308 SUPERFAMILY SSF46785 5 114 1.15E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS05255 2c4ec611b592b37422195bc519a168f4 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 4.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS05255 2c4ec611b592b37422195bc519a168f4 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 4.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS05255 2c4ec611b592b37422195bc519a168f4 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 4.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS05255 2c4ec611b592b37422195bc519a168f4 308 Gene3D G3DSA:1.10.10.10 8 87 1.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS05255 2c4ec611b592b37422195bc519a168f4 308 Pfam PF03466 LysR substrate binding domain 91 297 6.3E-45 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS05255 2c4ec611b592b37422195bc519a168f4 308 PANTHER PTHR30126 8 292 9.6E-114 T 22-04-2016 RPIC12D_RS05255 2c4ec611b592b37422195bc519a168f4 308 SUPERFAMILY SSF53850 93 297 4.62E-42 T 22-04-2016 RPIC12D_RS05255 2c4ec611b592b37422195bc519a168f4 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 1.9E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS05255 2c4ec611b592b37422195bc519a168f4 308 PANTHER PTHR30126:SF36 8 292 9.6E-114 T 22-04-2016 RPIC12D_RS05255 2c4ec611b592b37422195bc519a168f4 308 Gene3D G3DSA:3.40.190.10 176 262 5.3E-17 T 22-04-2016 RPIC12D_RS03610 0036593e35c4cdc3fd1c4bbe564b4c89 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.9E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS03610 0036593e35c4cdc3fd1c4bbe564b4c89 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.9E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS03610 0036593e35c4cdc3fd1c4bbe564b4c89 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.9E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS03610 0036593e35c4cdc3fd1c4bbe564b4c89 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.9E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS03610 0036593e35c4cdc3fd1c4bbe564b4c89 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.9E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS03610 0036593e35c4cdc3fd1c4bbe564b4c89 250 Gene3D G3DSA:3.40.50.720 2 233 5.7E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS03610 0036593e35c4cdc3fd1c4bbe564b4c89 250 Pfam PF00106 short chain dehydrogenase 2 187 2.5E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS03610 0036593e35c4cdc3fd1c4bbe564b4c89 250 SUPERFAMILY SSF51735 2 224 6.71E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS03610 0036593e35c4cdc3fd1c4bbe564b4c89 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC12D_RS03610 0036593e35c4cdc3fd1c4bbe564b4c89 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.0E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS03610 0036593e35c4cdc3fd1c4bbe564b4c89 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 2.0E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS03610 0036593e35c4cdc3fd1c4bbe564b4c89 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.0E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS03610 0036593e35c4cdc3fd1c4bbe564b4c89 250 PANTHER PTHR24322:SF392 5 131 4.7E-75 T 22-04-2016 RPIC12D_RS03610 0036593e35c4cdc3fd1c4bbe564b4c89 250 PANTHER PTHR24322:SF392 147 179 4.7E-75 T 22-04-2016 RPIC12D_RS03610 0036593e35c4cdc3fd1c4bbe564b4c89 250 PANTHER PTHR24322 5 131 4.7E-75 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS03610 0036593e35c4cdc3fd1c4bbe564b4c89 250 PANTHER PTHR24322 147 179 4.7E-75 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00225 234323d200f0aef8cafdfd1143ce874a 397 SUPERFAMILY SSF53335 23 379 5.87E-92 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS00225 234323d200f0aef8cafdfd1143ce874a 397 Gene3D G3DSA:3.40.50.150 86 166 4.5E-4 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS00225 234323d200f0aef8cafdfd1143ce874a 397 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 85 322 2.0E-46 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RPIC12D_RS00225 234323d200f0aef8cafdfd1143ce874a 397 PANTHER PTHR12049 10 374 2.3E-50 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RPIC12D_RS15770 dce68918dcd1a34ec1fcef860e48e175 231 Gene3D G3DSA:1.10.10.10 12 73 2.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS15770 dce68918dcd1a34ec1fcef860e48e175 231 PANTHER PTHR11751 11 98 8.9E-18 T 22-04-2016 RPIC12D_RS15770 dce68918dcd1a34ec1fcef860e48e175 231 SUPERFAMILY SSF46785 12 90 8.72E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS15770 dce68918dcd1a34ec1fcef860e48e175 231 Pfam PF07729 FCD domain 82 207 3.6E-22 T 22-04-2016 IPR011711 GntR, C-terminal RPIC12D_RS15770 dce68918dcd1a34ec1fcef860e48e175 231 SMART SM00895 82 208 4.7E-19 T 22-04-2016 IPR011711 GntR, C-terminal RPIC12D_RS15770 dce68918dcd1a34ec1fcef860e48e175 231 SMART SM00345 14 72 2.5E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS15770 dce68918dcd1a34ec1fcef860e48e175 231 SUPERFAMILY SSF48008 79 213 4.97E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC12D_RS15770 dce68918dcd1a34ec1fcef860e48e175 231 Gene3D G3DSA:1.20.120.530 75 213 5.4E-28 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC12D_RS15770 dce68918dcd1a34ec1fcef860e48e175 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 72 1.2E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS16605 e7521031e0d903e3bcef48c4e7fec98e 576 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 90 113 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS16605 e7521031e0d903e3bcef48c4e7fec98e 576 PANTHER PTHR11552 6 573 3.5E-205 T 22-04-2016 RPIC12D_RS16605 e7521031e0d903e3bcef48c4e7fec98e 576 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 274 288 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS16605 e7521031e0d903e3bcef48c4e7fec98e 576 Pfam PF05199 GMC oxidoreductase 407 548 2.0E-41 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 RPIC12D_RS16605 e7521031e0d903e3bcef48c4e7fec98e 576 Gene3D G3DSA:3.50.50.60 199 333 2.2E-117 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS16605 e7521031e0d903e3bcef48c4e7fec98e 576 Gene3D G3DSA:3.50.50.60 489 554 2.2E-117 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS16605 e7521031e0d903e3bcef48c4e7fec98e 576 Gene3D G3DSA:3.50.50.60 10 134 2.2E-117 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS16605 e7521031e0d903e3bcef48c4e7fec98e 576 SUPERFAMILY SSF54373 310 496 2.06E-52 T 22-04-2016 RPIC12D_RS16605 e7521031e0d903e3bcef48c4e7fec98e 576 Pfam PF00732 GMC oxidoreductase 12 315 5.7E-82 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS16605 e7521031e0d903e3bcef48c4e7fec98e 576 PIRSF PIRSF000137 3 559 7.0E-154 T 22-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 RPIC12D_RS16605 e7521031e0d903e3bcef48c4e7fec98e 576 SUPERFAMILY SSF51905 495 554 2.27E-85 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS16605 e7521031e0d903e3bcef48c4e7fec98e 576 SUPERFAMILY SSF51905 10 308 2.27E-85 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS14010 d5fe8704fabd3b78eae151e83b44ff3f 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.366 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RPIC12D_RS14010 d5fe8704fabd3b78eae151e83b44ff3f 360 Pfam PF03462 PCRF domain 13 203 2.0E-70 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RPIC12D_RS14010 d5fe8704fabd3b78eae151e83b44ff3f 360 PANTHER PTHR11075 1 356 1.4E-168 T 22-04-2016 RPIC12D_RS14010 d5fe8704fabd3b78eae151e83b44ff3f 360 Gene3D G3DSA:3.30.160.20 214 288 7.8E-36 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RPIC12D_RS14010 d5fe8704fabd3b78eae151e83b44ff3f 360 PANTHER PTHR11075:SF9 1 356 1.4E-168 T 22-04-2016 RPIC12D_RS14010 d5fe8704fabd3b78eae151e83b44ff3f 360 SUPERFAMILY SSF75620 12 353 1.83E-135 T 22-04-2016 RPIC12D_RS14010 d5fe8704fabd3b78eae151e83b44ff3f 360 SMART SM00937 63 178 6.7E-63 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RPIC12D_RS14010 d5fe8704fabd3b78eae151e83b44ff3f 360 Gene3D G3DSA:1.20.58.410 7 93 8.2E-16 T 22-04-2016 RPIC12D_RS14010 d5fe8704fabd3b78eae151e83b44ff3f 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RPIC12D_RS14010 d5fe8704fabd3b78eae151e83b44ff3f 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 356 6.8E-162 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RPIC12D_RS14010 d5fe8704fabd3b78eae151e83b44ff3f 360 Pfam PF00472 RF-1 domain 214 321 2.5E-43 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RPIC12D_RS06940 2c78754d59e445ee85b8ef641347fb82 249 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 83 111 - T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RPIC12D_RS06940 2c78754d59e445ee85b8ef641347fb82 249 SUPERFAMILY SSF49482 12 241 9.81E-76 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RPIC12D_RS06940 2c78754d59e445ee85b8ef641347fb82 249 PANTHER PTHR33711 7 240 3.1E-107 T 22-04-2016 RPIC12D_RS06940 2c78754d59e445ee85b8ef641347fb82 249 Pfam PF00775 Dioxygenase 50 231 1.4E-50 T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RPIC12D_RS06940 2c78754d59e445ee85b8ef641347fb82 249 PANTHER PTHR33711:SF1 7 240 3.1E-107 T 22-04-2016 RPIC12D_RS06940 2c78754d59e445ee85b8ef641347fb82 249 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 13 42 4.1E-15 T 22-04-2016 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 RPIC12D_RS06940 2c78754d59e445ee85b8ef641347fb82 249 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 19 240 4.2E-108 T 22-04-2016 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 RPIC12D_RS06940 2c78754d59e445ee85b8ef641347fb82 249 Gene3D G3DSA:2.60.130.10 12 240 1.0E-76 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RPIC12D_RS09735 441ca595683487498e7e5861e33330c8 117 PRINTS PR00189 Transthyretin signature 3 23 9.6E-7 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase RPIC12D_RS09735 441ca595683487498e7e5861e33330c8 117 PRINTS PR00189 Transthyretin signature 95 117 9.6E-7 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase RPIC12D_RS09735 441ca595683487498e7e5861e33330c8 117 Pfam PF00576 HIUase/Transthyretin family 4 116 2.4E-35 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily RPIC12D_RS09735 441ca595683487498e7e5861e33330c8 117 SUPERFAMILY SSF49472 1 117 1.12E-41 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily RPIC12D_RS09735 441ca595683487498e7e5861e33330c8 117 ProSitePatterns PS00769 Transthyretin signature 2. 100 112 - T 22-04-2016 IPR023419 Transthyretin, conserved site RPIC12D_RS09735 441ca595683487498e7e5861e33330c8 117 Gene3D G3DSA:2.60.40.180 2 117 7.4E-38 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily RPIC12D_RS09735 441ca595683487498e7e5861e33330c8 117 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 22-04-2016 IPR023418 Transthyretin, thyroxine binding site RPIC12D_RS09735 441ca595683487498e7e5861e33330c8 117 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 117 4.1E-40 T 22-04-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 RPIC12D_RS09735 441ca595683487498e7e5861e33330c8 117 PANTHER PTHR10395:SF7 1 117 1.1E-44 T 22-04-2016 RPIC12D_RS09735 441ca595683487498e7e5861e33330c8 117 PANTHER PTHR10395 1 117 1.1E-44 T 22-04-2016 RPIC12D_RS17320 fbca4af6064a7aacf5f641d7631b27d7 410 Gene3D G3DSA:1.10.150.130 103 197 2.6E-18 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC12D_RS17320 fbca4af6064a7aacf5f641d7631b27d7 410 PANTHER PTHR30629:SF2 2 398 1.2E-97 T 22-04-2016 RPIC12D_RS17320 fbca4af6064a7aacf5f641d7631b27d7 410 SUPERFAMILY SSF56349 103 384 3.24E-58 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC12D_RS17320 fbca4af6064a7aacf5f641d7631b27d7 410 PANTHER PTHR30629 2 398 1.2E-97 T 22-04-2016 RPIC12D_RS17320 fbca4af6064a7aacf5f641d7631b27d7 410 Pfam PF00589 Phage integrase family 210 374 2.1E-22 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS17320 fbca4af6064a7aacf5f641d7631b27d7 410 Pfam PF13356 Domain of unknown function (DUF4102) 8 93 5.4E-19 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 RPIC12D_RS17320 fbca4af6064a7aacf5f641d7631b27d7 410 Gene3D G3DSA:1.10.443.10 209 381 4.1E-24 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS12045 b59dd6c4de87db0ab506656d907a79f7 252 SUPERFAMILY SSF51735 4 247 8.86E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS12045 b59dd6c4de87db0ab506656d907a79f7 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.0E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12045 b59dd6c4de87db0ab506656d907a79f7 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.0E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12045 b59dd6c4de87db0ab506656d907a79f7 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.0E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12045 b59dd6c4de87db0ab506656d907a79f7 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.0E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12045 b59dd6c4de87db0ab506656d907a79f7 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.0E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12045 b59dd6c4de87db0ab506656d907a79f7 252 PANTHER PTHR24322 10 142 3.7E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12045 b59dd6c4de87db0ab506656d907a79f7 252 PANTHER PTHR24322 158 194 3.7E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12045 b59dd6c4de87db0ab506656d907a79f7 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC12D_RS12045 b59dd6c4de87db0ab506656d907a79f7 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 1.3E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12045 b59dd6c4de87db0ab506656d907a79f7 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.3E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12045 b59dd6c4de87db0ab506656d907a79f7 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.3E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12045 b59dd6c4de87db0ab506656d907a79f7 252 Gene3D G3DSA:3.40.50.720 2 249 3.8E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS12045 b59dd6c4de87db0ab506656d907a79f7 252 Pfam PF00106 short chain dehydrogenase 7 196 2.2E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12045 b59dd6c4de87db0ab506656d907a79f7 252 PANTHER PTHR24322:SF356 10 142 3.7E-56 T 22-04-2016 RPIC12D_RS12045 b59dd6c4de87db0ab506656d907a79f7 252 PANTHER PTHR24322:SF356 158 194 3.7E-56 T 22-04-2016 RPIC12D_RS12045 b59dd6c4de87db0ab506656d907a79f7 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 4.8E-4 T 22-04-2016 RPIC12D_RS10255 fa016d2636dd90ca4e46f3e6dddb0193 365 PANTHER PTHR21266:SF2 15 363 6.8E-46 T 22-04-2016 RPIC12D_RS10255 fa016d2636dd90ca4e46f3e6dddb0193 365 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 167 363 8.1E-35 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RPIC12D_RS10255 fa016d2636dd90ca4e46f3e6dddb0193 365 SUPERFAMILY SSF55961 160 363 1.65E-44 T 22-04-2016 RPIC12D_RS10255 fa016d2636dd90ca4e46f3e6dddb0193 365 SUPERFAMILY SSF50022 5 140 7.59E-34 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC12D_RS10255 fa016d2636dd90ca4e46f3e6dddb0193 365 Gene3D G3DSA:3.90.380.10 139 362 3.1E-11 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RPIC12D_RS10255 fa016d2636dd90ca4e46f3e6dddb0193 365 Pfam PF00355 Rieske [2Fe-2S] domain 43 121 3.9E-11 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC12D_RS10255 fa016d2636dd90ca4e46f3e6dddb0193 365 Gene3D G3DSA:2.102.10.10 42 138 9.8E-25 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC12D_RS10255 fa016d2636dd90ca4e46f3e6dddb0193 365 PANTHER PTHR21266 15 363 6.8E-46 T 22-04-2016 RPIC12D_RS10255 fa016d2636dd90ca4e46f3e6dddb0193 365 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 94 114 5.7E-8 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RPIC12D_RS10255 fa016d2636dd90ca4e46f3e6dddb0193 365 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 24 49 5.7E-8 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RPIC12D_RS10255 fa016d2636dd90ca4e46f3e6dddb0193 365 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 54 69 5.7E-8 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RPIC12D_RS05560 cc5a25c4492c6b36e671c11d6f2c5e82 264 PANTHER PTHR24322:SF317 11 191 5.6E-57 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RPIC12D_RS05560 cc5a25c4492c6b36e671c11d6f2c5e82 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 3.5E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS05560 cc5a25c4492c6b36e671c11d6f2c5e82 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 3.5E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS05560 cc5a25c4492c6b36e671c11d6f2c5e82 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.5E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS05560 cc5a25c4492c6b36e671c11d6f2c5e82 264 SUPERFAMILY SSF51735 6 253 1.44E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS05560 cc5a25c4492c6b36e671c11d6f2c5e82 264 PIRSF PIRSF000094 1 259 3.4E-113 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RPIC12D_RS05560 cc5a25c4492c6b36e671c11d6f2c5e82 264 PANTHER PTHR24322 11 191 5.6E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS05560 cc5a25c4492c6b36e671c11d6f2c5e82 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 252 8.0E-83 T 22-04-2016 RPIC12D_RS05560 cc5a25c4492c6b36e671c11d6f2c5e82 264 Gene3D G3DSA:3.40.50.720 2 253 2.4E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS10395 32b136806954c9901a7a583935cf619a 400 SUPERFAMILY SSF53901 4 275 8.64E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS10395 32b136806954c9901a7a583935cf619a 400 Gene3D G3DSA:3.40.47.10 154 199 5.3E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS10395 32b136806954c9901a7a583935cf619a 400 Gene3D G3DSA:3.40.47.10 282 399 5.3E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS10395 32b136806954c9901a7a583935cf619a 400 Pfam PF00108 Thiolase, N-terminal domain 5 267 9.9E-72 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RPIC12D_RS10395 32b136806954c9901a7a583935cf619a 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RPIC12D_RS10395 32b136806954c9901a7a583935cf619a 400 PIRSF PIRSF000429 1 400 3.8E-132 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC12D_RS10395 32b136806954c9901a7a583935cf619a 400 Gene3D G3DSA:3.40.47.10 200 281 3.0E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS10395 32b136806954c9901a7a583935cf619a 400 Gene3D G3DSA:3.40.47.10 4 125 3.0E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS10395 32b136806954c9901a7a583935cf619a 400 PANTHER PTHR18919 1 400 7.3E-235 T 22-04-2016 RPIC12D_RS10395 32b136806954c9901a7a583935cf619a 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RPIC12D_RS10395 32b136806954c9901a7a583935cf619a 400 Pfam PF02803 Thiolase, C-terminal domain 276 399 4.5E-46 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RPIC12D_RS10395 32b136806954c9901a7a583935cf619a 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 2.1E-136 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC12D_RS10395 32b136806954c9901a7a583935cf619a 400 SUPERFAMILY SSF53901 276 399 8.3E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS10395 32b136806954c9901a7a583935cf619a 400 PANTHER PTHR18919:SF91 1 400 7.3E-235 T 22-04-2016 RPIC12D_RS10395 32b136806954c9901a7a583935cf619a 400 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 400 3.3E-223 T 22-04-2016 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 RPIC12D_RS07830 d2f27d6a5712b3679cb112a37b37cd73 186 SMART SM00900 98 179 9.2E-9 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 RPIC12D_RS07830 d2f27d6a5712b3679cb112a37b37cd73 186 Pfam PF04205 FMN-binding domain 103 175 1.8E-8 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 RPIC12D_RS14520 2ca2424b11e1f1da27d692732e825145 721 PANTHER PTHR30604 105 720 5.2E-107 T 22-04-2016 RPIC12D_RS14520 2ca2424b11e1f1da27d692732e825145 721 Pfam PF11741 AMIN domain 66 148 8.9E-9 T 22-04-2016 IPR021731 AMIN domain RPIC12D_RS14520 2ca2424b11e1f1da27d692732e825145 721 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 293 714 1.3E-155 T 22-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 RPIC12D_RS14520 2ca2424b11e1f1da27d692732e825145 721 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 660 693 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 RPIC12D_RS14520 2ca2424b11e1f1da27d692732e825145 721 SMART SM00965 318 366 2.1E-9 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 RPIC12D_RS14520 2ca2424b11e1f1da27d692732e825145 721 Pfam PF03958 Bacterial type II/III secretion system short domain 392 470 2.0E-12 T 22-04-2016 IPR005644 NolW-like RPIC12D_RS14520 2ca2424b11e1f1da27d692732e825145 721 Pfam PF00263 Bacterial type II and III secretion system protein 560 714 2.1E-49 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 RPIC12D_RS14520 2ca2424b11e1f1da27d692732e825145 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 470 480 2.3E-22 T 22-04-2016 IPR001775 GspD/PilQ family RPIC12D_RS14520 2ca2424b11e1f1da27d692732e825145 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 556 580 2.3E-22 T 22-04-2016 IPR001775 GspD/PilQ family RPIC12D_RS14520 2ca2424b11e1f1da27d692732e825145 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 702 716 2.3E-22 T 22-04-2016 IPR001775 GspD/PilQ family RPIC12D_RS14520 2ca2424b11e1f1da27d692732e825145 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 679 697 2.3E-22 T 22-04-2016 IPR001775 GspD/PilQ family RPIC12D_RS14520 2ca2424b11e1f1da27d692732e825145 721 Pfam PF07660 Secretin and TonB N terminus short domain 320 365 1.8E-8 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 RPIC12D_RS14865 b9bfcbf506321ce346223195e38f8c54 143 SUPERFAMILY SSF54747 3 72 5.63E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal RPIC12D_RS14865 b9bfcbf506321ce346223195e38f8c54 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.4E-24 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14865 b9bfcbf506321ce346223195e38f8c54 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.6E-64 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14865 b9bfcbf506321ce346223195e38f8c54 143 SUPERFAMILY SSF46906 68 141 5.23E-26 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14865 b9bfcbf506321ce346223195e38f8c54 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.1E-28 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal RPIC12D_RS14865 b9bfcbf506321ce346223195e38f8c54 143 SMART SM00649 9 141 4.8E-85 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14865 b9bfcbf506321ce346223195e38f8c54 143 Gene3D G3DSA:1.10.10.250 73 141 9.6E-31 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14865 b9bfcbf506321ce346223195e38f8c54 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.367 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14865 b9bfcbf506321ce346223195e38f8c54 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14865 b9bfcbf506321ce346223195e38f8c54 143 Gene3D G3DSA:3.30.1550.10 2 72 9.6E-37 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal RPIC12D_RS14865 b9bfcbf506321ce346223195e38f8c54 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-16 T 22-04-2016 RPIC12D_RS14865 b9bfcbf506321ce346223195e38f8c54 143 PANTHER PTHR11661 1 142 1.6E-70 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS07390 776bee7b6dbdfd0a0517c44c61f136aa 150 Pfam PF13673 Acetyltransferase (GNAT) domain 49 147 6.7E-21 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC12D_RS07390 776bee7b6dbdfd0a0517c44c61f136aa 150 SUPERFAMILY SSF55729 13 148 1.74E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS07390 776bee7b6dbdfd0a0517c44c61f136aa 150 PANTHER PTHR13355:SF8 23 149 6.0E-38 T 22-04-2016 RPIC12D_RS07390 776bee7b6dbdfd0a0517c44c61f136aa 150 Gene3D G3DSA:3.40.630.30 23 146 1.5E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS07390 776bee7b6dbdfd0a0517c44c61f136aa 150 PANTHER PTHR13355 23 149 6.0E-38 T 22-04-2016 RPIC12D_RS10180 b6f7fa04635aa8fcc032b4b774f256b3 334 PANTHER PTHR23200:SF46 35 331 6.4E-72 T 22-04-2016 RPIC12D_RS10180 b6f7fa04635aa8fcc032b4b774f256b3 334 Gene3D G3DSA:3.60.15.10 36 324 8.8E-61 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS10180 b6f7fa04635aa8fcc032b4b774f256b3 334 Pfam PF00753 Metallo-beta-lactamase superfamily 95 278 3.0E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS10180 b6f7fa04635aa8fcc032b4b774f256b3 334 SMART SM00849 96 302 1.8E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS10180 b6f7fa04635aa8fcc032b4b774f256b3 334 PANTHER PTHR23200 35 331 6.4E-72 T 22-04-2016 RPIC12D_RS10180 b6f7fa04635aa8fcc032b4b774f256b3 334 SUPERFAMILY SSF56281 34 324 7.08E-55 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS16630 95c79f20a0f2e04aa3df6f046429b079 635 PANTHER PTHR30557 133 163 0.0 T 22-04-2016 RPIC12D_RS16630 95c79f20a0f2e04aa3df6f046429b079 635 PANTHER PTHR30557 24 99 0.0 T 22-04-2016 RPIC12D_RS16630 95c79f20a0f2e04aa3df6f046429b079 635 PANTHER PTHR30557 198 634 0.0 T 22-04-2016 RPIC12D_RS16630 95c79f20a0f2e04aa3df6f046429b079 635 PANTHER PTHR30557:SF1 133 163 0.0 T 22-04-2016 RPIC12D_RS16630 95c79f20a0f2e04aa3df6f046429b079 635 PANTHER PTHR30557:SF1 24 99 0.0 T 22-04-2016 RPIC12D_RS16630 95c79f20a0f2e04aa3df6f046429b079 635 PANTHER PTHR30557:SF1 198 634 0.0 T 22-04-2016 RPIC12D_RS16630 95c79f20a0f2e04aa3df6f046429b079 635 Pfam PF01964 Radical SAM ThiC family 142 596 3.2E-199 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RPIC12D_RS16630 95c79f20a0f2e04aa3df6f046429b079 635 Pfam PF13667 ThiC-associated domain 25 101 2.3E-31 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RPIC12D_RS16630 95c79f20a0f2e04aa3df6f046429b079 635 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 140 599 2.2E-214 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RPIC12D_RS16630 95c79f20a0f2e04aa3df6f046429b079 635 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 140 601 57.036 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RPIC12D_RS10070 9e840ae1874cc7f069d163afda7a3d0b 315 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 4 303 8.2E-77 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC12D_RS10070 9e840ae1874cc7f069d163afda7a3d0b 315 SUPERFAMILY SSF51735 3 138 4.21E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS10070 9e840ae1874cc7f069d163afda7a3d0b 315 Gene3D G3DSA:3.40.50.720 2 188 6.4E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS10070 9e840ae1874cc7f069d163afda7a3d0b 315 Gene3D G3DSA:1.10.1040.10 189 306 5.4E-38 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC12D_RS10070 9e840ae1874cc7f069d163afda7a3d0b 315 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 180 304 5.8E-36 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC12D_RS10070 9e840ae1874cc7f069d163afda7a3d0b 315 PANTHER PTHR21708 1 301 1.3E-67 T 22-04-2016 RPIC12D_RS10070 9e840ae1874cc7f069d163afda7a3d0b 315 SUPERFAMILY SSF48179 180 304 1.87E-34 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS10070 9e840ae1874cc7f069d163afda7a3d0b 315 PANTHER PTHR21708:SF24 1 301 1.3E-67 T 22-04-2016 RPIC12D_RS10070 9e840ae1874cc7f069d163afda7a3d0b 315 Pfam PF02558 Ketopantoate reductase PanE/ApbA 5 152 4.8E-38 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC12D_RS14285 f4bc05b0ff99a90f5aca5edd9da1fa7b 203 PANTHER PTHR11260:SF44 1 203 7.3E-63 T 22-04-2016 RPIC12D_RS14285 f4bc05b0ff99a90f5aca5edd9da1fa7b 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 1.2E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC12D_RS14285 f4bc05b0ff99a90f5aca5edd9da1fa7b 203 Gene3D G3DSA:1.20.1050.10 91 194 9.8E-20 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS14285 f4bc05b0ff99a90f5aca5edd9da1fa7b 203 Gene3D G3DSA:3.40.30.10 1 90 4.8E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS14285 f4bc05b0ff99a90f5aca5edd9da1fa7b 203 SUPERFAMILY SSF52833 1 101 9.42E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS14285 f4bc05b0ff99a90f5aca5edd9da1fa7b 203 SUPERFAMILY SSF47616 73 202 8.81E-24 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS14285 f4bc05b0ff99a90f5aca5edd9da1fa7b 203 PANTHER PTHR11260 1 203 7.3E-63 T 22-04-2016 RPIC12D_RS14285 f4bc05b0ff99a90f5aca5edd9da1fa7b 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 111 188 8.7E-8 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RPIC12D_RS16325 d07eae6bb4362d2c1d2892f6a37fdf6b 235 Pfam PF00230 Major intrinsic protein 6 144 1.1E-13 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS16325 d07eae6bb4362d2c1d2892f6a37fdf6b 235 SUPERFAMILY SSF81338 5 215 1.44E-36 T 22-04-2016 IPR023271 Aquaporin-like RPIC12D_RS16325 d07eae6bb4362d2c1d2892f6a37fdf6b 235 Gene3D G3DSA:1.20.1080.10 6 212 5.0E-28 T 22-04-2016 IPR023271 Aquaporin-like RPIC12D_RS16325 d07eae6bb4362d2c1d2892f6a37fdf6b 235 PRINTS PR00783 Major intrinsic protein family signature 85 104 1.7E-20 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS16325 d07eae6bb4362d2c1d2892f6a37fdf6b 235 PRINTS PR00783 Major intrinsic protein family signature 192 212 1.7E-20 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS16325 d07eae6bb4362d2c1d2892f6a37fdf6b 235 PRINTS PR00783 Major intrinsic protein family signature 6 25 1.7E-20 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS16325 d07eae6bb4362d2c1d2892f6a37fdf6b 235 PRINTS PR00783 Major intrinsic protein family signature 48 72 1.7E-20 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS16325 d07eae6bb4362d2c1d2892f6a37fdf6b 235 PRINTS PR00783 Major intrinsic protein family signature 128 146 1.7E-20 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS16325 d07eae6bb4362d2c1d2892f6a37fdf6b 235 PANTHER PTHR19139 7 141 2.9E-13 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS16325 d07eae6bb4362d2c1d2892f6a37fdf6b 235 PANTHER PTHR19139:SF103 7 141 2.9E-13 T 22-04-2016 RPIC12D_RS17950 cd5ce50808cc35570d1d32df59ae15e5 141 SMART SM00878 61 141 8.8E-19 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC12D_RS17950 cd5ce50808cc35570d1d32df59ae15e5 141 Pfam PF02785 Biotin carboxylase C-terminal domain 61 141 4.4E-24 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC12D_RS17950 cd5ce50808cc35570d1d32df59ae15e5 141 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 1 47 1.3E-16 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS17950 cd5ce50808cc35570d1d32df59ae15e5 141 Gene3D G3DSA:3.30.470.20 1 141 3.1E-53 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC12D_RS17950 cd5ce50808cc35570d1d32df59ae15e5 141 PANTHER PTHR18866 1 141 5.0E-83 T 22-04-2016 RPIC12D_RS17950 cd5ce50808cc35570d1d32df59ae15e5 141 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 11 18 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC12D_RS17950 cd5ce50808cc35570d1d32df59ae15e5 141 SUPERFAMILY SSF51246 56 141 4.66E-26 T 22-04-2016 IPR011054 Rudiment single hybrid motif RPIC12D_RS17950 cd5ce50808cc35570d1d32df59ae15e5 141 SUPERFAMILY SSF56059 1 73 5.77E-18 T 22-04-2016 RPIC12D_RS06540 4d63fbbbe2055b147e54bb37270a3347 526 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 22 526 3.4E-228 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RPIC12D_RS06540 4d63fbbbe2055b147e54bb37270a3347 526 Pfam PF01274 Malate synthase 11 526 3.1E-199 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RPIC12D_RS06540 4d63fbbbe2055b147e54bb37270a3347 526 PANTHER PTHR21631 1 526 6.7E-269 T 22-04-2016 RPIC12D_RS06540 4d63fbbbe2055b147e54bb37270a3347 526 SUPERFAMILY SSF51645 5 526 4.19E-187 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RPIC12D_RS06540 4d63fbbbe2055b147e54bb37270a3347 526 Gene3D G3DSA:3.20.20.360 71 407 1.6E-114 T 22-04-2016 RPIC12D_RS06540 4d63fbbbe2055b147e54bb37270a3347 526 PIRSF PIRSF001363 1 526 1.1E-247 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RPIC12D_RS06540 4d63fbbbe2055b147e54bb37270a3347 526 ProSitePatterns PS00510 Malate synthase signature. 263 278 - T 22-04-2016 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RPIC12D_RS06540 4d63fbbbe2055b147e54bb37270a3347 526 PANTHER PTHR21631:SF1 1 526 6.7E-269 T 22-04-2016 RPIC12D_RS06540 4d63fbbbe2055b147e54bb37270a3347 526 Gene3D G3DSA:1.20.1220.12 411 520 5.9E-31 T 22-04-2016 RPIC12D_RS13670 80ba2dc035f708c355f1f12ae0b1b758 142 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 142 49.95 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RPIC12D_RS13670 80ba2dc035f708c355f1f12ae0b1b758 142 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 141 5.5E-33 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RPIC12D_RS13670 80ba2dc035f708c355f1f12ae0b1b758 142 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 121 8.0E-55 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RPIC12D_RS13670 80ba2dc035f708c355f1f12ae0b1b758 142 PANTHER PTHR34701 2 120 2.3E-42 T 22-04-2016 RPIC12D_RS13670 80ba2dc035f708c355f1f12ae0b1b758 142 SUPERFAMILY SSF89447 2 129 1.7E-38 T 22-04-2016 RPIC12D_RS13670 80ba2dc035f708c355f1f12ae0b1b758 142 Pfam PF02381 MraZ protein, putative antitoxin-like 2 67 9.3E-15 T 22-04-2016 IPR020603 MraZ domain RPIC12D_RS13670 80ba2dc035f708c355f1f12ae0b1b758 142 Pfam PF02381 MraZ protein, putative antitoxin-like 73 127 1.1E-13 T 22-04-2016 IPR020603 MraZ domain RPIC12D_RS15265 cd0d14d1e3740ad963c06b10f3c53ee5 205 ProSitePatterns PS00018 EF-hand calcium-binding domain. 133 145 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site RPIC12D_RS15265 cd0d14d1e3740ad963c06b10f3c53ee5 205 ProSitePatterns PS00018 EF-hand calcium-binding domain. 94 106 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site RPIC12D_RS15265 cd0d14d1e3740ad963c06b10f3c53ee5 205 ProSitePatterns PS00018 EF-hand calcium-binding domain. 160 172 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site RPIC12D_RS15265 cd0d14d1e3740ad963c06b10f3c53ee5 205 SUPERFAMILY SSF47473 64 177 2.5E-24 T 22-04-2016 IPR011992 EF-hand domain pair RPIC12D_RS15265 cd0d14d1e3740ad963c06b10f3c53ee5 205 SMART SM00054 153 179 4.4 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RPIC12D_RS15265 cd0d14d1e3740ad963c06b10f3c53ee5 205 SMART SM00054 85 113 0.83 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RPIC12D_RS15265 cd0d14d1e3740ad963c06b10f3c53ee5 205 SMART SM00054 124 152 0.019 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RPIC12D_RS15265 cd0d14d1e3740ad963c06b10f3c53ee5 205 Pfam PF13499 EF-hand domain pair 87 147 3.2E-9 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RPIC12D_RS15265 cd0d14d1e3740ad963c06b10f3c53ee5 205 PANTHER PTHR10891 64 177 1.2E-12 T 22-04-2016 RPIC12D_RS15265 cd0d14d1e3740ad963c06b10f3c53ee5 205 Gene3D G3DSA:1.10.238.10 64 182 4.3E-26 T 22-04-2016 IPR011992 EF-hand domain pair RPIC12D_RS15265 cd0d14d1e3740ad963c06b10f3c53ee5 205 Pfam PF13202 EF hand 64 79 2.6E-5 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RPIC12D_RS15265 cd0d14d1e3740ad963c06b10f3c53ee5 205 Pfam PF13202 EF hand 156 174 2.1E-5 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 Hamap MF_00204 UvrABC system protein B [uvrB]. 22 682 43.802 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 Pfam PF00271 Helicase conserved C-terminal domain 455 564 9.2E-20 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 Gene3D G3DSA:3.30.2060.10 178 251 1.5E-12 T 22-04-2016 RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 Pfam PF12344 Ultra-violet resistance protein B 571 613 6.9E-23 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 SMART SM00487 28 444 2.7E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 24 680 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 SMART SM00490 479 565 4.4E-20 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 Gene3D G3DSA:4.10.860.10 642 685 9.9E-18 T 22-04-2016 IPR001943 UVR domain GO:0005515 RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 Gene3D G3DSA:3.40.50.300 297 357 2.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 Gene3D G3DSA:3.40.50.300 25 108 2.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 Gene3D G3DSA:3.40.50.300 407 427 2.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 Pfam PF04851 Type III restriction enzyme, res subunit 35 158 7.6E-10 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 Pfam PF02151 UvrB/uvrC motif 648 682 2.8E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 SUPERFAMILY SSF52540 478 603 4.88E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 SUPERFAMILY SSF52540 56 101 4.88E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 SUPERFAMILY SSF52540 23 434 7.54E-136 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 PANTHER PTHR24029 18 694 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 Gene3D G3DSA:3.40.50.300 438 598 2.4E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04700 961dd742047864e17217e925ab914110 696 SUPERFAMILY SSF46600 637 684 5.62E-12 T 22-04-2016 IPR001943 UVR domain GO:0005515 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 756 778 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 PRINTS PR01183 Ribonucleotide reductase large chain signature 583 594 5.3E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 PRINTS PR01183 Ribonucleotide reductase large chain signature 663 685 5.3E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 PRINTS PR01183 Ribonucleotide reductase large chain signature 448 467 5.3E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 PRINTS PR01183 Ribonucleotide reductase large chain signature 767 794 5.3E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 PRINTS PR01183 Ribonucleotide reductase large chain signature 625 648 5.3E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 PRINTS PR01183 Ribonucleotide reductase large chain signature 691 714 5.3E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 SUPERFAMILY SSF51998 372 816 7.63E-180 T 22-04-2016 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 SUPERFAMILY SSF51998 847 915 7.63E-180 T 22-04-2016 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 296 369 2.3E-22 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 SUPERFAMILY SSF48168 160 371 2.49E-61 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 Pfam PF02867 Ribonucleotide reductase, barrel domain 373 912 1.0E-182 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 Pfam PF03477 ATP cone domain 41 137 9.3E-17 T 22-04-2016 IPR005144 ATP-cone domain RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 Gene3D G3DSA:3.20.70.20 873 914 6.0E-85 T 22-04-2016 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 Gene3D G3DSA:3.20.70.20 767 812 6.0E-85 T 22-04-2016 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 Gene3D G3DSA:3.20.70.20 290 494 6.0E-85 T 22-04-2016 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 Gene3D G3DSA:3.20.70.20 549 711 6.0E-85 T 22-04-2016 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 299 915 4.1E-212 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 PANTHER PTHR11573 157 941 0.0 T 22-04-2016 RPIC12D_RS13205 8913cfeb379e048a23848f9b82c5df47 994 PANTHER PTHR11573 969 994 0.0 T 22-04-2016 RPIC12D_RS09375 638ee8b3aa101d83e6aff86b3de8de8d 101 Pfam PF00699 Urease beta subunit 3 100 9.1E-46 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09375 638ee8b3aa101d83e6aff86b3de8de8d 101 PANTHER PTHR33569:SF1 1 101 4.8E-65 T 22-04-2016 RPIC12D_RS09375 638ee8b3aa101d83e6aff86b3de8de8d 101 Gene3D G3DSA:2.10.150.10 1 101 1.6E-51 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09375 638ee8b3aa101d83e6aff86b3de8de8d 101 PANTHER PTHR33569 1 101 4.8E-65 T 22-04-2016 RPIC12D_RS09375 638ee8b3aa101d83e6aff86b3de8de8d 101 SUPERFAMILY SSF51278 1 101 1.83E-48 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09375 638ee8b3aa101d83e6aff86b3de8de8d 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 32.086 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS09375 638ee8b3aa101d83e6aff86b3de8de8d 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 100 4.9E-46 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC12D_RS12755 46a8f2af6f8a08c7a2fae2346420eaa5 383 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 374 2.4E-88 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC12D_RS12755 46a8f2af6f8a08c7a2fae2346420eaa5 383 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 2 372 54.452 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC12D_RS12755 46a8f2af6f8a08c7a2fae2346420eaa5 383 Gene3D G3DSA:3.20.20.105 1 377 1.2E-159 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC12D_RS12755 46a8f2af6f8a08c7a2fae2346420eaa5 383 PANTHER PTHR21148:SF26 1 380 9.8E-163 T 22-04-2016 RPIC12D_RS12755 46a8f2af6f8a08c7a2fae2346420eaa5 383 SUPERFAMILY SSF51713 1 375 1.96E-150 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC12D_RS12755 46a8f2af6f8a08c7a2fae2346420eaa5 383 PANTHER PTHR21148 1 380 9.8E-163 T 22-04-2016 RPIC12D_RS12755 46a8f2af6f8a08c7a2fae2346420eaa5 383 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 4 376 2.6E-156 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC12D_RS12755 46a8f2af6f8a08c7a2fae2346420eaa5 383 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 4 376 4.1E-150 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC12D_RS00660 764ebb49ab278d33dd4c4a977ed48bee 393 PANTHER PTHR18919 1 393 2.1E-221 T 22-04-2016 RPIC12D_RS00660 764ebb49ab278d33dd4c4a977ed48bee 393 SUPERFAMILY SSF53901 5 270 7.52E-83 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS00660 764ebb49ab278d33dd4c4a977ed48bee 393 Gene3D G3DSA:3.40.47.10 277 391 6.9E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS00660 764ebb49ab278d33dd4c4a977ed48bee 393 Gene3D G3DSA:3.40.47.10 143 195 6.9E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS00660 764ebb49ab278d33dd4c4a977ed48bee 393 PIRSF PIRSF000429 1 393 4.8E-117 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC12D_RS00660 764ebb49ab278d33dd4c4a977ed48bee 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 390 4.5E-127 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC12D_RS00660 764ebb49ab278d33dd4c4a977ed48bee 393 PANTHER PTHR18919:SF110 1 393 2.1E-221 T 22-04-2016 RPIC12D_RS00660 764ebb49ab278d33dd4c4a977ed48bee 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RPIC12D_RS00660 764ebb49ab278d33dd4c4a977ed48bee 393 Pfam PF00108 Thiolase, N-terminal domain 5 263 2.6E-88 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RPIC12D_RS00660 764ebb49ab278d33dd4c4a977ed48bee 393 SUPERFAMILY SSF53901 271 392 1.73E-38 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS00660 764ebb49ab278d33dd4c4a977ed48bee 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 2.7E-39 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RPIC12D_RS00660 764ebb49ab278d33dd4c4a977ed48bee 393 Gene3D G3DSA:3.40.47.10 196 275 7.6E-74 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS00660 764ebb49ab278d33dd4c4a977ed48bee 393 Gene3D G3DSA:3.40.47.10 5 124 7.6E-74 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS12090 13dc556f13c28aeda60ff5b833a035f5 158 SUPERFAMILY SSF46767 71 155 6.8E-27 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RPIC12D_RS12090 13dc556f13c28aeda60ff5b833a035f5 158 PANTHER PTHR10815 25 155 2.2E-43 T 22-04-2016 RPIC12D_RS12090 13dc556f13c28aeda60ff5b833a035f5 158 Gene3D G3DSA:1.10.10.10 71 156 1.8E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12090 13dc556f13c28aeda60ff5b833a035f5 158 SUPERFAMILY SSF53155 7 75 1.06E-12 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 RPIC12D_RS12090 13dc556f13c28aeda60ff5b833a035f5 158 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 72 153 1.2E-25 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RPIC12D_RS12090 13dc556f13c28aeda60ff5b833a035f5 158 PANTHER PTHR10815:SF5 25 155 2.2E-43 T 22-04-2016 RPIC12D_RS12090 13dc556f13c28aeda60ff5b833a035f5 158 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 73 155 1.8E-27 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RPIC12D_RS12090 13dc556f13c28aeda60ff5b833a035f5 158 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 120 126 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 RPIC12D_RS09585 de9050338f56a8085caedbb7b2cc0c31 338 SUPERFAMILY SSF48179 183 332 3.23E-71 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS09585 de9050338f56a8085caedbb7b2cc0c31 338 Gene3D G3DSA:1.10.1040.10 29 325 1.6E-115 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC12D_RS09585 de9050338f56a8085caedbb7b2cc0c31 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 5.4E-73 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS09585 de9050338f56a8085caedbb7b2cc0c31 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 1.7E-66 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS09585 de9050338f56a8085caedbb7b2cc0c31 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 8.1E-133 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS09585 de9050338f56a8085caedbb7b2cc0c31 338 PANTHER PTHR21371 1 337 5.7E-185 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS09585 de9050338f56a8085caedbb7b2cc0c31 338 SUPERFAMILY SSF51735 1 182 6.02E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS09585 de9050338f56a8085caedbb7b2cc0c31 338 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 328 45.522 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS14960 05516c50c1d279aa463d882cfe910089 372 SUPERFAMILY SSF52540 2 241 8.24E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14960 05516c50c1d279aa463d882cfe910089 372 Gene3D G3DSA:2.40.50.140 278 346 5.1E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS14960 05516c50c1d279aa463d882cfe910089 372 PANTHER PTHR24220:SF282 4 239 6.7E-97 T 22-04-2016 RPIC12D_RS14960 05516c50c1d279aa463d882cfe910089 372 PANTHER PTHR24220 4 239 6.7E-97 T 22-04-2016 RPIC12D_RS14960 05516c50c1d279aa463d882cfe910089 372 SUPERFAMILY SSF50331 236 360 6.56E-23 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RPIC12D_RS14960 05516c50c1d279aa463d882cfe910089 372 SMART SM00382 27 212 1.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS14960 05516c50c1d279aa463d882cfe910089 372 Pfam PF08402 TOBE domain 276 353 1.8E-7 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RPIC12D_RS14960 05516c50c1d279aa463d882cfe910089 372 Pfam PF00005 ABC transporter 21 160 4.7E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS14960 05516c50c1d279aa463d882cfe910089 372 Gene3D G3DSA:3.40.50.300 2 224 2.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08980 1c3cd0f491c488565cdc1651b93d419d 687 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 123 655 6.1E-137 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 RPIC12D_RS08980 1c3cd0f491c488565cdc1651b93d419d 687 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 124 654 1.5E-170 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 RPIC12D_RS08980 1c3cd0f491c488565cdc1651b93d419d 687 PANTHER PTHR21075 1 656 2.6E-219 T 22-04-2016 RPIC12D_RS08980 1c3cd0f491c488565cdc1651b93d419d 687 Gene3D G3DSA:3.20.70.20 129 656 5.1E-195 T 22-04-2016 RPIC12D_RS08980 1c3cd0f491c488565cdc1651b93d419d 687 Pfam PF03477 ATP cone domain 9 94 2.5E-17 T 22-04-2016 IPR005144 ATP-cone domain RPIC12D_RS08980 1c3cd0f491c488565cdc1651b93d419d 687 SUPERFAMILY SSF51998 124 657 8.24E-155 T 22-04-2016 RPIC12D_RS04035 28907f97c3858f0540ff21cb8801be32 332 Pfam PF00561 alpha/beta hydrolase fold 52 276 8.5E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS04035 28907f97c3858f0540ff21cb8801be32 332 Gene3D G3DSA:3.40.50.1820 44 331 9.0E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS04035 28907f97c3858f0540ff21cb8801be32 332 SUPERFAMILY SSF53474 48 303 1.3E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS04035 28907f97c3858f0540ff21cb8801be32 332 PANTHER PTHR11440 49 162 8.5E-18 T 22-04-2016 RPIC12D_RS11605 8dd0a6ea02da48b6e6fe6e047e9c5d15 158 SUPERFAMILY SSF55729 26 140 1.4E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS11605 8dd0a6ea02da48b6e6fe6e047e9c5d15 158 Pfam PF13673 Acetyltransferase (GNAT) domain 66 138 1.8E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC12D_RS11605 8dd0a6ea02da48b6e6fe6e047e9c5d15 158 Gene3D G3DSA:3.40.630.30 23 141 5.8E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS11605 8dd0a6ea02da48b6e6fe6e047e9c5d15 158 PANTHER PTHR13355 25 146 2.4E-16 T 22-04-2016 RPIC12D_RS11605 8dd0a6ea02da48b6e6fe6e047e9c5d15 158 PANTHER PTHR13355:SF5 25 146 2.4E-16 T 22-04-2016 RPIC12D_RS07990 57361b42ead9cc70b32003a16018a4a7 370 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 179 193 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS07990 57361b42ead9cc70b32003a16018a4a7 370 PANTHER PTHR11079:SF73 323 370 1.3E-122 T 22-04-2016 RPIC12D_RS07990 57361b42ead9cc70b32003a16018a4a7 370 PANTHER PTHR11079:SF73 49 305 1.3E-122 T 22-04-2016 RPIC12D_RS07990 57361b42ead9cc70b32003a16018a4a7 370 Gene3D G3DSA:3.10.290.10 62 110 2.8E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS07990 57361b42ead9cc70b32003a16018a4a7 370 PANTHER PTHR11079 323 370 1.3E-122 T 22-04-2016 RPIC12D_RS07990 57361b42ead9cc70b32003a16018a4a7 370 PANTHER PTHR11079 49 305 1.3E-122 T 22-04-2016 RPIC12D_RS07990 57361b42ead9cc70b32003a16018a4a7 370 SUPERFAMILY SSF55174 61 149 1.45E-9 T 22-04-2016 RPIC12D_RS07990 57361b42ead9cc70b32003a16018a4a7 370 Pfam PF00849 RNA pseudouridylate synthase 137 291 5.6E-33 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS07990 57361b42ead9cc70b32003a16018a4a7 370 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 58 361 3.8E-93 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS07990 57361b42ead9cc70b32003a16018a4a7 370 SMART SM00363 62 127 2.0E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS07990 57361b42ead9cc70b32003a16018a4a7 370 SUPERFAMILY SSF55120 121 364 5.55E-76 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS07990 57361b42ead9cc70b32003a16018a4a7 370 Pfam PF01479 S4 domain 62 108 1.3E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS15925 6b7c88b58be9b762b5f063ebc69a9f10 309 PANTHER PTHR21624:SF1 69 279 1.2E-78 T 22-04-2016 RPIC12D_RS15925 6b7c88b58be9b762b5f063ebc69a9f10 309 PANTHER PTHR21624 69 279 1.2E-78 T 22-04-2016 RPIC12D_RS15925 6b7c88b58be9b762b5f063ebc69a9f10 309 Pfam PF04116 Fatty acid hydroxylase superfamily 87 220 9.8E-29 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 RPIC12D_RS03950 f2169ba4cd788cc39db8efa2feb40503 122 PANTHER PTHR10438 1 114 4.7E-16 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC12D_RS03950 f2169ba4cd788cc39db8efa2feb40503 122 Pfam PF00085 Thioredoxin 2 102 2.6E-13 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RPIC12D_RS03950 f2169ba4cd788cc39db8efa2feb40503 122 SUPERFAMILY SSF52833 2 107 4.55E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS03950 f2169ba4cd788cc39db8efa2feb40503 122 Gene3D G3DSA:3.40.30.10 1 105 7.5E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS01390 52bc287cb38f5a23aaf22a6b404d66fb 207 Pfam PF03550 Outer membrane lipoprotein LolB 46 207 2.4E-37 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 RPIC12D_RS01390 52bc287cb38f5a23aaf22a6b404d66fb 207 SUPERFAMILY SSF89392 23 206 2.9E-35 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX RPIC12D_RS01390 52bc287cb38f5a23aaf22a6b404d66fb 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 3 174 2.3E-20 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 RPIC12D_RS01390 52bc287cb38f5a23aaf22a6b404d66fb 207 Gene3D G3DSA:2.50.20.10 18 207 1.1E-41 T 22-04-2016 RPIC12D_RS01390 52bc287cb38f5a23aaf22a6b404d66fb 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 7 207 20.791 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 RPIC12D_RS21225 659b46aa5df693c872b84142a8bbe9a3 294 PANTHER PTHR23537 1 294 1.3E-33 T 22-04-2016 RPIC12D_RS21225 659b46aa5df693c872b84142a8bbe9a3 294 Gene3D G3DSA:1.20.1250.20 17 139 1.5E-5 T 22-04-2016 RPIC12D_RS21225 659b46aa5df693c872b84142a8bbe9a3 294 SUPERFAMILY SSF103473 14 294 9.42E-17 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS21225 659b46aa5df693c872b84142a8bbe9a3 294 Gene3D G3DSA:1.20.1250.20 154 294 4.2E-6 T 22-04-2016 RPIC12D_RS21225 659b46aa5df693c872b84142a8bbe9a3 294 PANTHER PTHR23537:SF1 1 294 1.3E-33 T 22-04-2016 RPIC12D_RS21225 659b46aa5df693c872b84142a8bbe9a3 294 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 1 294 2.9E-90 T 22-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB RPIC12D_RS10890 78d71cb4c63ea7c85f7ef7e6e602f5eb 338 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 26 233 3.2E-76 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS10890 78d71cb4c63ea7c85f7ef7e6e602f5eb 338 SUPERFAMILY SSF54782 240 329 2.75E-21 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS10890 78d71cb4c63ea7c85f7ef7e6e602f5eb 338 PANTHER PTHR11557:SF0 3 330 2.1E-145 T 22-04-2016 RPIC12D_RS10890 78d71cb4c63ea7c85f7ef7e6e602f5eb 338 Gene3D G3DSA:3.30.160.40 241 328 5.1E-23 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS10890 78d71cb4c63ea7c85f7ef7e6e602f5eb 338 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 246 319 9.7E-16 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS10890 78d71cb4c63ea7c85f7ef7e6e602f5eb 338 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 26 320 1.3E-103 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS10890 78d71cb4c63ea7c85f7ef7e6e602f5eb 338 PIRSF PIRSF001438 1 334 8.0E-117 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS10890 78d71cb4c63ea7c85f7ef7e6e602f5eb 338 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 251 267 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS10890 78d71cb4c63ea7c85f7ef7e6e602f5eb 338 Gene3D G3DSA:3.40.190.10 24 130 1.3E-47 T 22-04-2016 RPIC12D_RS10890 78d71cb4c63ea7c85f7ef7e6e602f5eb 338 PANTHER PTHR11557 3 330 2.1E-145 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS10890 78d71cb4c63ea7c85f7ef7e6e602f5eb 338 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 25 321 37.908 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS10890 78d71cb4c63ea7c85f7ef7e6e602f5eb 338 Gene3D G3DSA:3.40.190.10 131 219 6.9E-39 T 22-04-2016 RPIC12D_RS10890 78d71cb4c63ea7c85f7ef7e6e602f5eb 338 PRINTS PR00151 Porphobilinogen deaminase signature 163 180 5.5E-46 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS10890 78d71cb4c63ea7c85f7ef7e6e602f5eb 338 PRINTS PR00151 Porphobilinogen deaminase signature 250 267 5.5E-46 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS10890 78d71cb4c63ea7c85f7ef7e6e602f5eb 338 PRINTS PR00151 Porphobilinogen deaminase signature 65 85 5.5E-46 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS10890 78d71cb4c63ea7c85f7ef7e6e602f5eb 338 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 5.5E-46 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS10890 78d71cb4c63ea7c85f7ef7e6e602f5eb 338 PRINTS PR00151 Porphobilinogen deaminase signature 96 115 5.5E-46 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS10890 78d71cb4c63ea7c85f7ef7e6e602f5eb 338 SUPERFAMILY SSF53850 25 238 1.63E-80 T 22-04-2016 RPIC12D_RS03840 11b949727124b5aec7e125ca785d461f 212 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 191 2.9E-9 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS03840 11b949727124b5aec7e125ca785d461f 212 PANTHER PTHR10681:SF99 3 207 1.1E-94 T 22-04-2016 RPIC12D_RS03840 11b949727124b5aec7e125ca785d461f 212 PANTHER PTHR10681 3 207 1.1E-94 T 22-04-2016 RPIC12D_RS03840 11b949727124b5aec7e125ca785d461f 212 Gene3D G3DSA:3.40.30.10 4 157 9.2E-62 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS03840 11b949727124b5aec7e125ca785d461f 212 PIRSF PIRSF000239 1 209 2.3E-78 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 RPIC12D_RS03840 11b949727124b5aec7e125ca785d461f 212 Gene3D G3DSA:3.30.1020.10 158 211 8.6E-27 T 22-04-2016 RPIC12D_RS03840 11b949727124b5aec7e125ca785d461f 212 SUPERFAMILY SSF52833 3 209 1.46E-68 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS03840 11b949727124b5aec7e125ca785d461f 212 Pfam PF00578 AhpC/TSA family 6 134 1.0E-30 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS11690 7d4867f0c50e75eb658a55f684f49df8 465 Gene3D G3DSA:3.30.70.1170 196 253 1.5E-17 T 22-04-2016 RPIC12D_RS11690 7d4867f0c50e75eb658a55f684f49df8 465 PANTHER PTHR22807 150 464 4.6E-85 T 22-04-2016 RPIC12D_RS11690 7d4867f0c50e75eb658a55f684f49df8 465 Pfam PF01189 16S rRNA methyltransferase RsmB/F 263 461 9.1E-52 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS11690 7d4867f0c50e75eb658a55f684f49df8 465 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 274 284 8.8E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS11690 7d4867f0c50e75eb658a55f684f49df8 465 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 393 409 8.8E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS11690 7d4867f0c50e75eb658a55f684f49df8 465 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 446 463 8.8E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS11690 7d4867f0c50e75eb658a55f684f49df8 465 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 245 259 8.8E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS11690 7d4867f0c50e75eb658a55f684f49df8 465 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 343 355 8.8E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS11690 7d4867f0c50e75eb658a55f684f49df8 465 Gene3D G3DSA:3.40.50.150 255 463 6.4E-57 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS11690 7d4867f0c50e75eb658a55f684f49df8 465 SUPERFAMILY SSF53335 161 463 1.52E-71 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS11690 7d4867f0c50e75eb658a55f684f49df8 465 PANTHER PTHR22807:SF30 150 464 4.6E-85 T 22-04-2016 RPIC12D_RS02745 cab4f0c23e4aacfba7796c39809fe294 58 Pfam PF04964 Flp/Fap pilin component 8 52 4.4E-14 T 22-04-2016 IPR007047 Flp/Fap pilin component RPIC12D_RS04935 12c35db614eaae774dfe612af539f926 365 PANTHER PTHR38782:SF1 17 353 1.4E-37 T 22-04-2016 RPIC12D_RS04935 12c35db614eaae774dfe612af539f926 365 PIRSF PIRSF005427 13 354 1.7E-107 T 22-04-2016 IPR005588 MucB/RseB RPIC12D_RS04935 12c35db614eaae774dfe612af539f926 365 Gene3D G3DSA:2.50.20.10 141 211 4.1E-6 T 22-04-2016 RPIC12D_RS04935 12c35db614eaae774dfe612af539f926 365 PANTHER PTHR38782 17 353 1.4E-37 T 22-04-2016 RPIC12D_RS04935 12c35db614eaae774dfe612af539f926 365 Pfam PF17188 MucB/RseB C-terminal domain 244 347 2.3E-27 T 22-04-2016 IPR033436 MucB/RseB, C-terminal RPIC12D_RS04935 12c35db614eaae774dfe612af539f926 365 Pfam PF03888 MucB/RseB N-terminal domain 48 223 7.0E-54 T 22-04-2016 IPR033434 MucB/RseB, N-terminal RPIC12D_RS07495 30b40ebd29c0a5e6d57886c71988b20d 315 PANTHER PTHR11795 1 262 9.0E-75 T 22-04-2016 RPIC12D_RS07495 30b40ebd29c0a5e6d57886c71988b20d 315 PANTHER PTHR11795 289 313 9.0E-75 T 22-04-2016 RPIC12D_RS07495 30b40ebd29c0a5e6d57886c71988b20d 315 PANTHER PTHR11795:SF379 289 313 9.0E-75 T 22-04-2016 RPIC12D_RS07495 30b40ebd29c0a5e6d57886c71988b20d 315 PANTHER PTHR11795:SF379 1 262 9.0E-75 T 22-04-2016 RPIC12D_RS07495 30b40ebd29c0a5e6d57886c71988b20d 315 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 274 2.8E-33 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS01085 1d1953fd13a572b644f7a9f106121175 431 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 17 425 3.2E-213 T 22-04-2016 IPR011718 Glutamate--cysteine ligase GshA RPIC12D_RS01085 1d1953fd13a572b644f7a9f106121175 431 Pfam PF08886 Glutamate-cysteine ligase 17 422 6.0E-201 T 22-04-2016 IPR011718 Glutamate--cysteine ligase GshA RPIC12D_RS08955 3b5f04419102198e466e5a4386c1e503 179 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 11 168 8.3E-60 T 22-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria RPIC12D_RS08955 3b5f04419102198e466e5a4386c1e503 179 PANTHER PTHR38596 9 176 3.3E-71 T 22-04-2016 RPIC12D_RS08955 3b5f04419102198e466e5a4386c1e503 179 PANTHER PTHR38596:SF1 9 176 3.3E-71 T 22-04-2016 RPIC12D_RS08955 3b5f04419102198e466e5a4386c1e503 179 Pfam PF03350 Uncharacterized protein family, UPF0114 15 131 3.8E-37 T 22-04-2016 IPR005134 Uncharacterised protein family UPF0114 RPIC12D_RS08955 3b5f04419102198e466e5a4386c1e503 179 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 172 90.739 T 22-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 RPIC12D_RS05660 e6d5b162bc75b27489bb0b01fc98d1f7 947 SUPERFAMILY SSF52540 293 646 4.89E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05660 e6d5b162bc75b27489bb0b01fc98d1f7 947 Gene3D G3DSA:3.40.50.300 285 364 4.5E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05660 e6d5b162bc75b27489bb0b01fc98d1f7 947 Gene3D G3DSA:3.40.50.300 541 575 4.5E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05660 e6d5b162bc75b27489bb0b01fc98d1f7 947 Pfam PF12705 PD-(D/E)XK nuclease superfamily 677 931 9.5E-29 T 22-04-2016 RPIC12D_RS03045 b36302d64dfe1284c04b89fe6249f0d7 257 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 69 255 8.1E-54 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RPIC12D_RS03045 b36302d64dfe1284c04b89fe6249f0d7 257 SUPERFAMILY SSF53335 34 256 2.17E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS03045 b36302d64dfe1284c04b89fe6249f0d7 257 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 43 256 30.281 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RPIC12D_RS03045 b36302d64dfe1284c04b89fe6249f0d7 257 Gene3D G3DSA:3.40.50.150 51 240 2.3E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS03045 b36302d64dfe1284c04b89fe6249f0d7 257 PANTHER PTHR23417:SF14 37 256 2.7E-72 T 22-04-2016 RPIC12D_RS03045 b36302d64dfe1284c04b89fe6249f0d7 257 Pfam PF02390 Putative methyltransferase 87 250 5.9E-54 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RPIC12D_RS03045 b36302d64dfe1284c04b89fe6249f0d7 257 PANTHER PTHR23417 37 256 2.7E-72 T 22-04-2016 RPIC12D_RS05420 c3bbe70d45550710bac26955c91ae1f3 400 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 5 173 7.0E-56 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RPIC12D_RS05420 c3bbe70d45550710bac26955c91ae1f3 400 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 398 34.66 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 RPIC12D_RS05420 c3bbe70d45550710bac26955c91ae1f3 400 Gene3D G3DSA:1.10.240.10 275 364 1.2E-31 T 22-04-2016 RPIC12D_RS05420 c3bbe70d45550710bac26955c91ae1f3 400 Gene3D G3DSA:3.40.50.620 241 274 3.4E-87 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS05420 c3bbe70d45550710bac26955c91ae1f3 400 Gene3D G3DSA:3.40.50.620 4 170 3.4E-87 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS05420 c3bbe70d45550710bac26955c91ae1f3 400 PANTHER PTHR10055 242 399 1.0E-160 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RPIC12D_RS05420 c3bbe70d45550710bac26955c91ae1f3 400 PANTHER PTHR10055 5 171 1.0E-160 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RPIC12D_RS05420 c3bbe70d45550710bac26955c91ae1f3 400 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS05420 c3bbe70d45550710bac26955c91ae1f3 400 SUPERFAMILY SSF52374 3 172 2.36E-87 T 22-04-2016 RPIC12D_RS05420 c3bbe70d45550710bac26955c91ae1f3 400 SUPERFAMILY SSF52374 243 397 2.36E-87 T 22-04-2016 RPIC12D_RS05420 c3bbe70d45550710bac26955c91ae1f3 400 Pfam PF00579 tRNA synthetases class I (W and Y) 244 344 1.1E-10 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS05420 c3bbe70d45550710bac26955c91ae1f3 400 Pfam PF00579 tRNA synthetases class I (W and Y) 5 170 9.1E-48 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS05420 c3bbe70d45550710bac26955c91ae1f3 400 PANTHER PTHR10055:SF6 242 399 1.0E-160 T 22-04-2016 RPIC12D_RS05420 c3bbe70d45550710bac26955c91ae1f3 400 PANTHER PTHR10055:SF6 5 171 1.0E-160 T 22-04-2016 RPIC12D_RS05420 c3bbe70d45550710bac26955c91ae1f3 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 6.3E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RPIC12D_RS05420 c3bbe70d45550710bac26955c91ae1f3 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 6.3E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RPIC12D_RS05420 c3bbe70d45550710bac26955c91ae1f3 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 6.3E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RPIC12D_RS01375 c78e66a4c97dda5614856368670f6db9 316 SUPERFAMILY SSF53271 71 305 1.39E-65 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS01375 c78e66a4c97dda5614856368670f6db9 316 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 6 315 49.139 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RPIC12D_RS01375 c78e66a4c97dda5614856368670f6db9 316 Gene3D G3DSA:3.40.50.2020 162 289 2.4E-55 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS01375 c78e66a4c97dda5614856368670f6db9 316 Gene3D G3DSA:3.40.50.2020 3 161 2.8E-77 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS01375 c78e66a4c97dda5614856368670f6db9 316 Pfam PF14572 Phosphoribosyl synthetase-associated domain 205 314 7.1E-28 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RPIC12D_RS01375 c78e66a4c97dda5614856368670f6db9 316 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 314 7.8E-123 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RPIC12D_RS01375 c78e66a4c97dda5614856368670f6db9 316 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 123 1.0E-49 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RPIC12D_RS01375 c78e66a4c97dda5614856368670f6db9 316 PANTHER PTHR10210 1 314 8.7E-181 T 22-04-2016 RPIC12D_RS01375 c78e66a4c97dda5614856368670f6db9 316 PANTHER PTHR10210:SF41 1 314 8.7E-181 T 22-04-2016 RPIC12D_RS01375 c78e66a4c97dda5614856368670f6db9 316 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 131 146 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 RPIC12D_RS01375 c78e66a4c97dda5614856368670f6db9 316 SMART SM01400 6 123 4.8E-80 T 22-04-2016 RPIC12D_RS12280 42802cd3bcd7f01bbe28c93c899929b2 351 Gene3D G3DSA:3.90.650.10 178 349 1.9E-68 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC12D_RS12280 42802cd3bcd7f01bbe28c93c899929b2 351 PANTHER PTHR10520 13 350 4.5E-210 T 22-04-2016 RPIC12D_RS12280 42802cd3bcd7f01bbe28c93c899929b2 351 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 13 340 2.1E-138 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC12D_RS12280 42802cd3bcd7f01bbe28c93c899929b2 351 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 170 1.1E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RPIC12D_RS12280 42802cd3bcd7f01bbe28c93c899929b2 351 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 13 349 47.091 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC12D_RS12280 42802cd3bcd7f01bbe28c93c899929b2 351 SUPERFAMILY SSF55326 13 176 1.94E-53 T 22-04-2016 RPIC12D_RS12280 42802cd3bcd7f01bbe28c93c899929b2 351 Pfam PF02769 AIR synthase related protein, C-terminal domain 183 345 3.3E-36 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC12D_RS12280 42802cd3bcd7f01bbe28c93c899929b2 351 SUPERFAMILY SSF56042 177 346 1.64E-60 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC12D_RS12280 42802cd3bcd7f01bbe28c93c899929b2 351 Gene3D G3DSA:3.30.1330.10 28 176 3.3E-64 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RPIC12D_RS03530 929af8187f85f29820012dcb93d6fff9 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 203 3.9E-51 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC12D_RS03530 929af8187f85f29820012dcb93d6fff9 217 SUPERFAMILY SSF63380 96 202 2.89E-31 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RPIC12D_RS03530 929af8187f85f29820012dcb93d6fff9 217 PANTHER PTHR21098 1 200 5.5E-75 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC12D_RS03530 929af8187f85f29820012dcb93d6fff9 217 Pfam PF00677 Lumazine binding domain 3 89 1.2E-13 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC12D_RS03530 929af8187f85f29820012dcb93d6fff9 217 Pfam PF00677 Lumazine binding domain 102 190 2.9E-21 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC12D_RS03530 929af8187f85f29820012dcb93d6fff9 217 SUPERFAMILY SSF63380 1 92 4.25E-16 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RPIC12D_RS03530 929af8187f85f29820012dcb93d6fff9 217 Gene3D G3DSA:2.40.30.20 107 206 2.5E-31 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS03530 929af8187f85f29820012dcb93d6fff9 217 Gene3D G3DSA:2.40.30.20 5 106 2.2E-21 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS03530 929af8187f85f29820012dcb93d6fff9 217 PIRSF PIRSF000498 1 208 1.2E-67 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC12D_RS00395 d13afb32aab125b4f032dc7a1ed58dce 168 SUPERFAMILY SSF46689 68 119 3.09E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS00395 d13afb32aab125b4f032dc7a1ed58dce 168 SUPERFAMILY SSF46689 16 65 7.17E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS00395 d13afb32aab125b4f032dc7a1ed58dce 168 PANTHER PTHR11019 16 123 1.1E-28 T 22-04-2016 RPIC12D_RS00395 d13afb32aab125b4f032dc7a1ed58dce 168 Gene3D G3DSA:1.10.10.60 70 119 2.8E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS00395 d13afb32aab125b4f032dc7a1ed58dce 168 SMART SM00342 32 115 1.9E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS00395 d13afb32aab125b4f032dc7a1ed58dce 168 PANTHER PTHR11019:SF105 16 123 1.1E-28 T 22-04-2016 RPIC12D_RS00395 d13afb32aab125b4f032dc7a1ed58dce 168 Pfam PF12833 Helix-turn-helix domain 38 116 2.8E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS00395 d13afb32aab125b4f032dc7a1ed58dce 168 Gene3D G3DSA:1.10.10.60 16 69 1.9E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS09040 d3d83457f46f3f0ac3b51746450accd5 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 134 8.5E-32 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS09040 d3d83457f46f3f0ac3b51746450accd5 136 PANTHER PTHR30558 9 135 7.0E-35 T 22-04-2016 RPIC12D_RS09040 d3d83457f46f3f0ac3b51746450accd5 136 PANTHER PTHR30558:SF3 9 135 7.0E-35 T 22-04-2016 RPIC12D_RS12540 847f7eff2807a88339e4b5547934f2b8 165 PIRSF PIRSF000303 1 162 5.9E-67 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC12D_RS12540 847f7eff2807a88339e4b5547934f2b8 165 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 22-04-2016 IPR029760 Glutathione peroxidase conserved site RPIC12D_RS12540 847f7eff2807a88339e4b5547934f2b8 165 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 22-04-2016 IPR029759 Glutathione peroxidase active site RPIC12D_RS12540 847f7eff2807a88339e4b5547934f2b8 165 Gene3D G3DSA:3.40.30.10 3 160 2.6E-71 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS12540 847f7eff2807a88339e4b5547934f2b8 165 PRINTS PR01011 Glutathione peroxidase family signature 123 132 6.4E-22 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC12D_RS12540 847f7eff2807a88339e4b5547934f2b8 165 PRINTS PR01011 Glutathione peroxidase family signature 57 73 6.4E-22 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC12D_RS12540 847f7eff2807a88339e4b5547934f2b8 165 PRINTS PR01011 Glutathione peroxidase family signature 22 39 6.4E-22 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC12D_RS12540 847f7eff2807a88339e4b5547934f2b8 165 Pfam PF00255 Glutathione peroxidase 4 110 1.0E-43 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC12D_RS12540 847f7eff2807a88339e4b5547934f2b8 165 SUPERFAMILY SSF52833 3 159 8.33E-63 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS12540 847f7eff2807a88339e4b5547934f2b8 165 PANTHER PTHR11592 1 161 1.5E-91 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC12D_RS06465 5e33b094dd00c505578c8abbcd016621 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 7.4E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06465 5e33b094dd00c505578c8abbcd016621 319 SUPERFAMILY SSF53850 91 298 5.72E-44 T 22-04-2016 RPIC12D_RS06465 5e33b094dd00c505578c8abbcd016621 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06465 5e33b094dd00c505578c8abbcd016621 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06465 5e33b094dd00c505578c8abbcd016621 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06465 5e33b094dd00c505578c8abbcd016621 319 Gene3D G3DSA:1.10.10.10 1 82 5.1E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06465 5e33b094dd00c505578c8abbcd016621 319 SUPERFAMILY SSF46785 11 112 1.31E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06465 5e33b094dd00c505578c8abbcd016621 319 PANTHER PTHR30126 1 309 1.1E-143 T 22-04-2016 RPIC12D_RS06465 5e33b094dd00c505578c8abbcd016621 319 Gene3D G3DSA:3.40.190.10 91 179 2.3E-23 T 22-04-2016 RPIC12D_RS06465 5e33b094dd00c505578c8abbcd016621 319 Pfam PF03466 LysR substrate binding domain 89 293 5.7E-45 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS06465 5e33b094dd00c505578c8abbcd016621 319 Gene3D G3DSA:3.40.190.10 180 259 2.3E-26 T 22-04-2016 RPIC12D_RS06465 5e33b094dd00c505578c8abbcd016621 319 PANTHER PTHR30126:SF6 1 309 1.1E-143 T 22-04-2016 RPIC12D_RS11765 9e90c1f2e03896fadaa7242638965eb0 416 PANTHER PTHR11835 1 164 2.4E-235 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RPIC12D_RS11765 9e90c1f2e03896fadaa7242638965eb0 416 PANTHER PTHR11835 188 255 2.4E-235 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RPIC12D_RS11765 9e90c1f2e03896fadaa7242638965eb0 416 PANTHER PTHR11835 275 416 2.4E-235 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RPIC12D_RS11765 9e90c1f2e03896fadaa7242638965eb0 416 Gene3D G3DSA:3.40.718.10 11 416 3.9E-160 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RPIC12D_RS11765 9e90c1f2e03896fadaa7242638965eb0 416 PANTHER PTHR11835:SF52 1 164 2.4E-235 T 22-04-2016 RPIC12D_RS11765 9e90c1f2e03896fadaa7242638965eb0 416 PANTHER PTHR11835:SF52 188 255 2.4E-235 T 22-04-2016 RPIC12D_RS11765 9e90c1f2e03896fadaa7242638965eb0 416 PANTHER PTHR11835:SF52 275 416 2.4E-235 T 22-04-2016 RPIC12D_RS11765 9e90c1f2e03896fadaa7242638965eb0 416 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RPIC12D_RS11765 9e90c1f2e03896fadaa7242638965eb0 416 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 2 416 1.5E-222 T 22-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 RPIC12D_RS11765 9e90c1f2e03896fadaa7242638965eb0 416 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 29 410 9.9E-113 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RPIC12D_RS11765 9e90c1f2e03896fadaa7242638965eb0 416 SMART SM01329 28 412 6.7E-170 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RPIC12D_RS11765 9e90c1f2e03896fadaa7242638965eb0 416 SUPERFAMILY SSF53659 2 416 6.34E-144 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 Gene3D G3DSA:2.40.40.20 418 490 1.6E-36 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 Gene3D G3DSA:2.40.40.20 350 377 1.6E-36 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 SUPERFAMILY SSF64484 16 950 0.0 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 SUPERFAMILY SSF64484 1140 1370 0.0 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1025 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 Pfam PF04998 RNA polymerase Rpb1, domain 5 772 1322 4.3E-77 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 PANTHER PTHR19376:SF32 1309 1406 0.0 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 PANTHER PTHR19376:SF32 1183 1268 0.0 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 PANTHER PTHR19376:SF32 976 1164 0.0 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 PANTHER PTHR19376:SF32 4 552 0.0 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 PANTHER PTHR19376:SF32 576 949 0.0 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 Gene3D G3DSA:2.40.50.100 1018 1056 4.9E-5 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 PANTHER PTHR19376 1309 1406 0.0 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 PANTHER PTHR19376 1183 1268 0.0 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 PANTHER PTHR19376 976 1164 0.0 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 PANTHER PTHR19376 4 552 0.0 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 PANTHER PTHR19376 576 949 0.0 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1382 10.426 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 343 6.4E-86 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 397 4.4E-8 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 486 1.8E-27 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 Gene3D G3DSA:2.40.50.100 988 1017 1.6E-5 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 Gene3D G3DSA:2.40.50.100 1163 1215 4.6E-6 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 594 32.234 T 22-04-2016 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 SMART SM00663 236 515 6.7E-173 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 Pfam PF05000 RNA polymerase Rpb1, domain 4 679 769 9.8E-19 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14840 0fd676f4f04d094453bc6af81dfdbae0 1409 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 650 5.4E-21 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS00750 c1a32422131c4e4d2547b9618867430b 146 Pfam PF00072 Response regulator receiver domain 15 127 7.7E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS00750 c1a32422131c4e4d2547b9618867430b 146 PANTHER PTHR26402 13 128 9.2E-24 T 22-04-2016 RPIC12D_RS00750 c1a32422131c4e4d2547b9618867430b 146 SUPERFAMILY SSF52172 10 138 7.68E-23 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS00750 c1a32422131c4e4d2547b9618867430b 146 SMART SM00448 13 127 1.5E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS00750 c1a32422131c4e4d2547b9618867430b 146 Gene3D G3DSA:3.40.50.2300 9 133 2.2E-23 T 22-04-2016 RPIC12D_RS10125 de44332170c0206e6189eae762206752 1172 Pfam PF02811 PHP domain 8 180 2.4E-38 T 22-04-2016 IPR004013 PHP domain GO:0003824 RPIC12D_RS10125 de44332170c0206e6189eae762206752 1172 Pfam PF14579 Helix-hairpin-helix motif 811 900 4.3E-29 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS10125 de44332170c0206e6189eae762206752 1172 Gene3D G3DSA:1.10.150.280 838 886 2.1E-4 T 22-04-2016 RPIC12D_RS10125 de44332170c0206e6189eae762206752 1172 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 984 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS10125 de44332170c0206e6189eae762206752 1172 SMART SM00481 7 74 1.1E-22 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RPIC12D_RS10125 de44332170c0206e6189eae762206752 1172 SUPERFAMILY SSF89550 6 270 2.55E-10 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RPIC12D_RS10125 de44332170c0206e6189eae762206752 1172 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 298 736 2.7E-176 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS10125 de44332170c0206e6189eae762206752 1172 Gene3D G3DSA:3.20.20.140 6 263 3.1E-19 T 22-04-2016 RPIC12D_RS10125 de44332170c0206e6189eae762206752 1172 Gene3D G3DSA:2.40.50.140 1003 1088 9.1E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS10125 de44332170c0206e6189eae762206752 1172 PANTHER PTHR32294:SF0 2 1172 0.0 T 22-04-2016 RPIC12D_RS10125 de44332170c0206e6189eae762206752 1172 PANTHER PTHR32294 2 1172 0.0 T 22-04-2016 RPIC12D_RS00440 cb78dec889b9dbb5d9fdd5ce4f4f1da6 416 Pfam PF00872 Transposase, Mutator family 31 391 9.6E-116 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS00440 cb78dec889b9dbb5d9fdd5ce4f4f1da6 416 ProSitePatterns PS01007 Transposases, Mutator family, signature. 244 268 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS00440 cb78dec889b9dbb5d9fdd5ce4f4f1da6 416 PANTHER PTHR33217 11 412 1.0E-149 T 22-04-2016 RPIC12D_RS06390 cb78dec889b9dbb5d9fdd5ce4f4f1da6 416 Pfam PF00872 Transposase, Mutator family 31 391 9.6E-116 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS06390 cb78dec889b9dbb5d9fdd5ce4f4f1da6 416 ProSitePatterns PS01007 Transposases, Mutator family, signature. 244 268 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS06390 cb78dec889b9dbb5d9fdd5ce4f4f1da6 416 PANTHER PTHR33217 11 412 1.0E-149 T 22-04-2016 RPIC12D_RS01260 cb78dec889b9dbb5d9fdd5ce4f4f1da6 416 Pfam PF00872 Transposase, Mutator family 31 391 9.6E-116 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS01260 cb78dec889b9dbb5d9fdd5ce4f4f1da6 416 ProSitePatterns PS01007 Transposases, Mutator family, signature. 244 268 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS01260 cb78dec889b9dbb5d9fdd5ce4f4f1da6 416 PANTHER PTHR33217 11 412 1.0E-149 T 22-04-2016 RPIC12D_RS15900 cb78dec889b9dbb5d9fdd5ce4f4f1da6 416 Pfam PF00872 Transposase, Mutator family 31 391 9.6E-116 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS15900 cb78dec889b9dbb5d9fdd5ce4f4f1da6 416 ProSitePatterns PS01007 Transposases, Mutator family, signature. 244 268 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS15900 cb78dec889b9dbb5d9fdd5ce4f4f1da6 416 PANTHER PTHR33217 11 412 1.0E-149 T 22-04-2016 RPIC12D_RS03595 cb78dec889b9dbb5d9fdd5ce4f4f1da6 416 Pfam PF00872 Transposase, Mutator family 31 391 9.6E-116 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS03595 cb78dec889b9dbb5d9fdd5ce4f4f1da6 416 ProSitePatterns PS01007 Transposases, Mutator family, signature. 244 268 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS03595 cb78dec889b9dbb5d9fdd5ce4f4f1da6 416 PANTHER PTHR33217 11 412 1.0E-149 T 22-04-2016 RPIC12D_RS15745 cb78dec889b9dbb5d9fdd5ce4f4f1da6 416 Pfam PF00872 Transposase, Mutator family 31 391 9.6E-116 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS15745 cb78dec889b9dbb5d9fdd5ce4f4f1da6 416 ProSitePatterns PS01007 Transposases, Mutator family, signature. 244 268 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS15745 cb78dec889b9dbb5d9fdd5ce4f4f1da6 416 PANTHER PTHR33217 11 412 1.0E-149 T 22-04-2016 RPIC12D_RS25555 2b73aa2e7c6957cd5945df1b212aa7e7 132 PANTHER PTHR32338:SF9 15 132 1.4E-37 T 22-04-2016 RPIC12D_RS25555 2b73aa2e7c6957cd5945df1b212aa7e7 132 Gene3D G3DSA:3.40.50.720 64 131 1.0E-8 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS25555 2b73aa2e7c6957cd5945df1b212aa7e7 132 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 54 122 2.4E-11 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RPIC12D_RS25555 2b73aa2e7c6957cd5945df1b212aa7e7 132 SMART SM00859 27 128 4.0E-15 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RPIC12D_RS25555 2b73aa2e7c6957cd5945df1b212aa7e7 132 SUPERFAMILY SSF51735 24 131 9.15E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS25555 2b73aa2e7c6957cd5945df1b212aa7e7 132 PANTHER PTHR32338 15 132 1.4E-37 T 22-04-2016 RPIC12D_RS06875 4a9ee037ea403b4d57f542113704fcca 314 Pfam PF00892 EamA-like transporter family 3 137 1.2E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS06875 4a9ee037ea403b4d57f542113704fcca 314 SUPERFAMILY SSF103481 210 306 8.76E-6 T 22-04-2016 RPIC12D_RS06875 4a9ee037ea403b4d57f542113704fcca 314 PANTHER PTHR12715 1 309 6.9E-71 T 22-04-2016 RPIC12D_RS06875 4a9ee037ea403b4d57f542113704fcca 314 PANTHER PTHR12715:SF21 1 309 6.9E-71 T 22-04-2016 RPIC12D_RS12575 723fbd75eeae1330ffa41396313e39a1 166 SUPERFAMILY SSF47240 14 165 2.19E-48 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC12D_RS12575 723fbd75eeae1330ffa41396313e39a1 166 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 48 64 2.83E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RPIC12D_RS12575 723fbd75eeae1330ffa41396313e39a1 166 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 72 88 2.83E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RPIC12D_RS12575 723fbd75eeae1330ffa41396313e39a1 166 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 143 161 2.83E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RPIC12D_RS12575 723fbd75eeae1330ffa41396313e39a1 166 Pfam PF00210 Ferritin-like domain 28 165 2.9E-27 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RPIC12D_RS12575 723fbd75eeae1330ffa41396313e39a1 166 PANTHER PTHR30295 6 165 4.4E-67 T 22-04-2016 RPIC12D_RS12575 723fbd75eeae1330ffa41396313e39a1 166 PANTHER PTHR30295:SF6 6 165 4.4E-67 T 22-04-2016 RPIC12D_RS12575 723fbd75eeae1330ffa41396313e39a1 166 ProSitePatterns PS00819 Dps protein family signature 2. 74 88 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 RPIC12D_RS12575 723fbd75eeae1330ffa41396313e39a1 166 ProSitePatterns PS00818 Dps protein family signature 1. 48 64 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 RPIC12D_RS12575 723fbd75eeae1330ffa41396313e39a1 166 Gene3D G3DSA:1.20.1260.10 9 165 1.9E-66 T 22-04-2016 IPR012347 Ferritin-related RPIC12D_RS12575 723fbd75eeae1330ffa41396313e39a1 166 PIRSF PIRSF005900 5 166 2.0E-47 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RPIC12D_RS01195 6d0f518ffa9f69d7b536215a3f15f90e 286 Gene3D G3DSA:1.20.120.80 78 286 3.5E-66 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 RPIC12D_RS01195 6d0f518ffa9f69d7b536215a3f15f90e 286 PANTHER PTHR11403:SF0 2 286 1.4E-97 T 22-04-2016 RPIC12D_RS01195 6d0f518ffa9f69d7b536215a3f15f90e 286 PANTHER PTHR11403 2 286 1.4E-97 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 RPIC12D_RS01195 6d0f518ffa9f69d7b536215a3f15f90e 286 Pfam PF00510 Cytochrome c oxidase subunit III 11 285 1.4E-60 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RPIC12D_RS01195 6d0f518ffa9f69d7b536215a3f15f90e 286 Gene3D G3DSA:1.10.287.70 7 73 1.0E-14 T 22-04-2016 RPIC12D_RS01195 6d0f518ffa9f69d7b536215a3f15f90e 286 SUPERFAMILY SSF81452 8 286 3.01E-81 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RPIC12D_RS13820 928be5ac0fd1cf5b1682ab4cb871e088 189 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.0E-34 T 22-04-2016 RPIC12D_RS13820 928be5ac0fd1cf5b1682ab4cb871e088 189 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.0E-34 T 22-04-2016 RPIC12D_RS13820 928be5ac0fd1cf5b1682ab4cb871e088 189 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.0E-34 T 22-04-2016 RPIC12D_RS13820 928be5ac0fd1cf5b1682ab4cb871e088 189 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.0E-34 T 22-04-2016 RPIC12D_RS13820 928be5ac0fd1cf5b1682ab4cb871e088 189 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.0E-34 T 22-04-2016 RPIC12D_RS13820 928be5ac0fd1cf5b1682ab4cb871e088 189 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.0E-34 T 22-04-2016 RPIC12D_RS13820 928be5ac0fd1cf5b1682ab4cb871e088 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 8.4E-6 T 22-04-2016 RPIC12D_RS13820 928be5ac0fd1cf5b1682ab4cb871e088 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 8.4E-6 T 22-04-2016 RPIC12D_RS13820 928be5ac0fd1cf5b1682ab4cb871e088 189 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 3.4E-82 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC12D_RS13820 928be5ac0fd1cf5b1682ab4cb871e088 189 Pfam PF00117 Glutamine amidotransferase class-I 4 186 8.1E-56 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RPIC12D_RS13820 928be5ac0fd1cf5b1682ab4cb871e088 189 SUPERFAMILY SSF52317 1 186 6.23E-57 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS13820 928be5ac0fd1cf5b1682ab4cb871e088 189 PANTHER PTHR11922 1 188 1.5E-95 T 22-04-2016 RPIC12D_RS13820 928be5ac0fd1cf5b1682ab4cb871e088 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 1.5E-13 T 22-04-2016 RPIC12D_RS13820 928be5ac0fd1cf5b1682ab4cb871e088 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.5E-13 T 22-04-2016 RPIC12D_RS13820 928be5ac0fd1cf5b1682ab4cb871e088 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.5E-13 T 22-04-2016 RPIC12D_RS13820 928be5ac0fd1cf5b1682ab4cb871e088 189 Gene3D G3DSA:3.40.50.880 2 186 2.3E-69 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS13820 928be5ac0fd1cf5b1682ab4cb871e088 189 PANTHER PTHR11922:SF7 1 188 1.5E-95 T 22-04-2016 RPIC12D_RS11190 f27ac20380dfa8df2aa1680338767ac9 316 PANTHER PTHR23293 258 316 4.1E-67 T 22-04-2016 RPIC12D_RS11190 f27ac20380dfa8df2aa1680338767ac9 316 PANTHER PTHR23293 16 172 4.1E-67 T 22-04-2016 RPIC12D_RS11190 f27ac20380dfa8df2aa1680338767ac9 316 PANTHER PTHR23293 192 225 4.1E-67 T 22-04-2016 RPIC12D_RS11190 f27ac20380dfa8df2aa1680338767ac9 316 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 40 269 1.3E-46 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 RPIC12D_RS11190 f27ac20380dfa8df2aa1680338767ac9 316 Gene3D G3DSA:3.40.50.620 257 265 1.0E-52 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS11190 f27ac20380dfa8df2aa1680338767ac9 316 Gene3D G3DSA:3.40.50.620 14 224 1.0E-52 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS11190 f27ac20380dfa8df2aa1680338767ac9 316 PIRSF PIRSF002936 11 316 5.5E-136 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 RPIC12D_RS11190 f27ac20380dfa8df2aa1680338767ac9 316 PANTHER PTHR23293:SF6 258 316 4.1E-67 T 22-04-2016 RPIC12D_RS11190 f27ac20380dfa8df2aa1680338767ac9 316 PANTHER PTHR23293:SF6 16 172 4.1E-67 T 22-04-2016 RPIC12D_RS11190 f27ac20380dfa8df2aa1680338767ac9 316 PANTHER PTHR23293:SF6 192 225 4.1E-67 T 22-04-2016 RPIC12D_RS11190 f27ac20380dfa8df2aa1680338767ac9 316 SUPERFAMILY SSF52402 16 224 1.51E-62 T 22-04-2016 RPIC12D_RS10885 e225b7c3b2e6f1eb49caf072302f5e11 704 Gene3D G3DSA:3.40.50.10090 157 254 1.2E-10 T 22-04-2016 RPIC12D_RS10885 e225b7c3b2e6f1eb49caf072302f5e11 704 PANTHER PTHR38042 22 293 3.1E-39 T 22-04-2016 RPIC12D_RS10885 e225b7c3b2e6f1eb49caf072302f5e11 704 Pfam PF02602 Uroporphyrinogen-III synthase HemD 41 268 1.5E-35 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS10885 e225b7c3b2e6f1eb49caf072302f5e11 704 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 362 698 3.8E-41 T 22-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX RPIC12D_RS10885 e225b7c3b2e6f1eb49caf072302f5e11 704 SUPERFAMILY SSF69618 28 280 2.09E-47 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC12D_RS10885 e225b7c3b2e6f1eb49caf072302f5e11 704 Gene3D G3DSA:3.40.50.10090 31 127 1.5E-17 T 22-04-2016 RPIC12D_RS10885 e225b7c3b2e6f1eb49caf072302f5e11 704 PANTHER PTHR38042:SF1 22 293 3.1E-39 T 22-04-2016 RPIC12D_RS02665 3fab521a2f792a2d8e17425b8dd16f7c 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 3.4E-100 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 RPIC12D_RS02665 3fab521a2f792a2d8e17425b8dd16f7c 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 2.6E-256 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC12D_RS02665 3fab521a2f792a2d8e17425b8dd16f7c 547 SUPERFAMILY SSF54849 137 203 4.35E-24 T 22-04-2016 RPIC12D_RS02665 3fab521a2f792a2d8e17425b8dd16f7c 547 Gene3D G3DSA:1.10.560.10 4 188 5.4E-48 T 22-04-2016 IPR027413 GroEL-like equatorial domain RPIC12D_RS02665 3fab521a2f792a2d8e17425b8dd16f7c 547 Gene3D G3DSA:3.50.7.10 189 368 3.7E-100 T 22-04-2016 IPR027409 GroEL-like apical domain RPIC12D_RS02665 3fab521a2f792a2d8e17425b8dd16f7c 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 41.849 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC12D_RS02665 3fab521a2f792a2d8e17425b8dd16f7c 547 Gene3D G3DSA:1.10.560.10 369 518 7.8E-43 T 22-04-2016 IPR027413 GroEL-like equatorial domain RPIC12D_RS02665 3fab521a2f792a2d8e17425b8dd16f7c 547 PANTHER PTHR11353 2 547 9.9E-255 T 22-04-2016 RPIC12D_RS02665 3fab521a2f792a2d8e17425b8dd16f7c 547 SUPERFAMILY SSF48592 406 521 2.9E-79 T 22-04-2016 RPIC12D_RS02665 3fab521a2f792a2d8e17425b8dd16f7c 547 SUPERFAMILY SSF48592 7 134 2.9E-79 T 22-04-2016 RPIC12D_RS02665 3fab521a2f792a2d8e17425b8dd16f7c 547 SUPERFAMILY SSF52029 185 376 4.49E-84 T 22-04-2016 IPR027409 GroEL-like apical domain RPIC12D_RS02665 3fab521a2f792a2d8e17425b8dd16f7c 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 RPIC12D_RS02665 3fab521a2f792a2d8e17425b8dd16f7c 547 PRINTS PR00298 60kDa chaperonin signature 83 110 1.6E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC12D_RS02665 3fab521a2f792a2d8e17425b8dd16f7c 547 PRINTS PR00298 60kDa chaperonin signature 268 291 1.6E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC12D_RS02665 3fab521a2f792a2d8e17425b8dd16f7c 547 PRINTS PR00298 60kDa chaperonin signature 398 419 1.6E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC12D_RS02665 3fab521a2f792a2d8e17425b8dd16f7c 547 PRINTS PR00298 60kDa chaperonin signature 27 53 1.6E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC12D_RS02665 3fab521a2f792a2d8e17425b8dd16f7c 547 PRINTS PR00298 60kDa chaperonin signature 350 375 1.6E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC12D_RS04505 782c02195a7b117f72e6ed28b249f872 780 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 10 772 32.774 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS04505 782c02195a7b117f72e6ed28b249f872 780 SUPERFAMILY SSF56719 37 511 8.89E-148 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RPIC12D_RS04505 782c02195a7b117f72e6ed28b249f872 780 SMART SM00434 17 489 3.9E-212 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS04505 782c02195a7b117f72e6ed28b249f872 780 Gene3D G3DSA:3.30.1360.40 243 358 1.1E-20 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain RPIC12D_RS04505 782c02195a7b117f72e6ed28b249f872 780 SUPERFAMILY SSF101904 526 766 2.35E-45 T 22-04-2016 RPIC12D_RS04505 782c02195a7b117f72e6ed28b249f872 780 PANTHER PTHR10169:SF30 300 548 5.5E-193 T 22-04-2016 RPIC12D_RS04505 782c02195a7b117f72e6ed28b249f872 780 PANTHER PTHR10169:SF30 15 273 5.5E-193 T 22-04-2016 RPIC12D_RS04505 782c02195a7b117f72e6ed28b249f872 780 Gene3D G3DSA:3.90.199.10 361 426 3.2E-107 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RPIC12D_RS04505 782c02195a7b117f72e6ed28b249f872 780 Gene3D G3DSA:3.90.199.10 37 242 3.2E-107 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RPIC12D_RS04505 782c02195a7b117f72e6ed28b249f872 780 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 15 713 3.5E-225 T 22-04-2016 RPIC12D_RS04505 782c02195a7b117f72e6ed28b249f872 780 PANTHER PTHR10169 300 548 5.5E-193 T 22-04-2016 RPIC12D_RS04505 782c02195a7b117f72e6ed28b249f872 780 PANTHER PTHR10169 15 273 5.5E-193 T 22-04-2016 RPIC12D_RS04505 782c02195a7b117f72e6ed28b249f872 780 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 38 488 6.4E-130 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS04505 782c02195a7b117f72e6ed28b249f872 780 Gene3D G3DSA:2.120.10.90 520 741 3.8E-28 T 22-04-2016 RPIC12D_RS01030 2053f7736036389c550bcd76f1687020 315 Pfam PF13391 HNH endonuclease 212 264 3.1E-8 T 22-04-2016 IPR003615 HNH nuclease RPIC12D_RS09270 dbc4ab9834fd44faa88bfd7879eb46c2 390 Gene3D G3DSA:3.40.640.10 50 278 7.7E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS09270 dbc4ab9834fd44faa88bfd7879eb46c2 390 Pfam PF00155 Aminotransferase class I and II 37 387 3.1E-65 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC12D_RS09270 dbc4ab9834fd44faa88bfd7879eb46c2 390 Gene3D G3DSA:3.90.1150.10 279 389 1.7E-15 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS09270 dbc4ab9834fd44faa88bfd7879eb46c2 390 PANTHER PTHR11751 16 390 1.1E-138 T 22-04-2016 RPIC12D_RS09270 dbc4ab9834fd44faa88bfd7879eb46c2 390 SUPERFAMILY SSF53383 15 389 6.86E-105 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS09270 dbc4ab9834fd44faa88bfd7879eb46c2 390 PANTHER PTHR11751:SF301 16 390 1.1E-138 T 22-04-2016 RPIC12D_RS05305 4840f24ca7a85d0776d071587880e69e 270 Gene3D G3DSA:3.20.20.140 1 258 6.5E-72 T 22-04-2016 RPIC12D_RS05305 4840f24ca7a85d0776d071587880e69e 270 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RPIC12D_RS05305 4840f24ca7a85d0776d071587880e69e 270 Pfam PF01026 TatD related DNase 3 258 6.7E-63 T 22-04-2016 IPR001130 TatD family GO:0016788 RPIC12D_RS05305 4840f24ca7a85d0776d071587880e69e 270 SUPERFAMILY SSF51556 2 259 1.02E-73 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC12D_RS05305 4840f24ca7a85d0776d071587880e69e 270 PANTHER PTHR10060 1 265 2.4E-72 T 22-04-2016 IPR001130 TatD family GO:0016788 RPIC12D_RS05305 4840f24ca7a85d0776d071587880e69e 270 PIRSF PIRSF005902 1 264 1.3E-61 T 22-04-2016 IPR001130 TatD family GO:0016788 RPIC12D_RS01490 933fe5935a7859335ed1e4a560e12546 202 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 30 197 1.5E-62 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 RPIC12D_RS01490 933fe5935a7859335ed1e4a560e12546 202 SUPERFAMILY SSF53271 31 199 3.67E-49 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS01490 933fe5935a7859335ed1e4a560e12546 202 PANTHER PTHR32315 15 202 1.2E-74 T 22-04-2016 RPIC12D_RS01490 933fe5935a7859335ed1e4a560e12546 202 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 30 199 37.009 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 RPIC12D_RS01490 933fe5935a7859335ed1e4a560e12546 202 Gene3D G3DSA:3.40.50.2020 29 200 1.0E-63 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS01490 933fe5935a7859335ed1e4a560e12546 202 Pfam PF00156 Phosphoribosyl transferase domain 77 178 2.2E-14 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIC12D_RS07110 69251754a148d35cfbf1a30bee3d5e14 792 Gene3D G3DSA:3.30.365.10 379 468 5.4E-71 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS07110 69251754a148d35cfbf1a30bee3d5e14 792 Gene3D G3DSA:3.30.365.10 639 788 5.4E-71 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS07110 69251754a148d35cfbf1a30bee3d5e14 792 Gene3D G3DSA:3.90.1170.50 6 134 1.3E-42 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC12D_RS07110 69251754a148d35cfbf1a30bee3d5e14 792 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 26 146 1.4E-29 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC12D_RS07110 69251754a148d35cfbf1a30bee3d5e14 792 Gene3D G3DSA:3.30.365.10 135 191 1.9E-50 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS07110 69251754a148d35cfbf1a30bee3d5e14 792 Gene3D G3DSA:3.30.365.10 300 376 1.9E-50 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS07110 69251754a148d35cfbf1a30bee3d5e14 792 SUPERFAMILY SSF54665 7 166 1.96E-45 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC12D_RS07110 69251754a148d35cfbf1a30bee3d5e14 792 PANTHER PTHR11908 607 792 0.0 T 22-04-2016 RPIC12D_RS07110 69251754a148d35cfbf1a30bee3d5e14 792 PANTHER PTHR11908 12 590 0.0 T 22-04-2016 RPIC12D_RS07110 69251754a148d35cfbf1a30bee3d5e14 792 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 161 724 7.3E-181 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS07110 69251754a148d35cfbf1a30bee3d5e14 792 Gene3D G3DSA:3.30.365.10 469 638 3.0E-52 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS07110 69251754a148d35cfbf1a30bee3d5e14 792 SMART SM01008 26 146 9.3E-54 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC12D_RS07110 69251754a148d35cfbf1a30bee3d5e14 792 SUPERFAMILY SSF56003 138 788 2.22E-207 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS07110 69251754a148d35cfbf1a30bee3d5e14 792 PANTHER PTHR11908:SF85 607 792 0.0 T 22-04-2016 RPIC12D_RS07110 69251754a148d35cfbf1a30bee3d5e14 792 PANTHER PTHR11908:SF85 12 590 0.0 T 22-04-2016 RPIC12D_RS07110 69251754a148d35cfbf1a30bee3d5e14 792 Gene3D G3DSA:3.30.365.10 192 298 8.9E-34 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS09965 11825b97f84d820d4e6a6dc9c9097950 504 ProSitePatterns PS00211 ABC transporters family signature. 389 403 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS09965 11825b97f84d820d4e6a6dc9c9097950 504 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS09965 11825b97f84d820d4e6a6dc9c9097950 504 SUPERFAMILY SSF52540 2 213 6.57E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09965 11825b97f84d820d4e6a6dc9c9097950 504 PANTHER PTHR24220 1 369 1.9E-150 T 22-04-2016 RPIC12D_RS09965 11825b97f84d820d4e6a6dc9c9097950 504 SUPERFAMILY SSF52540 258 469 7.88E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09965 11825b97f84d820d4e6a6dc9c9097950 504 Pfam PF00005 ABC transporter 12 156 7.6E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS09965 11825b97f84d820d4e6a6dc9c9097950 504 Pfam PF00005 ABC transporter 260 416 1.5E-9 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS09965 11825b97f84d820d4e6a6dc9c9097950 504 SMART SM00382 20 206 5.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS09965 11825b97f84d820d4e6a6dc9c9097950 504 Gene3D G3DSA:3.40.50.300 2 215 9.8E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09965 11825b97f84d820d4e6a6dc9c9097950 504 Gene3D G3DSA:3.40.50.300 260 473 3.1E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09965 11825b97f84d820d4e6a6dc9c9097950 504 PANTHER PTHR24220:SF239 1 369 1.9E-150 T 22-04-2016 RPIC12D_RS04435 78f5e1c430a493c1bc4d4e8298b4fa26 264 Pfam PF00303 Thymidylate synthase 3 264 5.3E-124 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS04435 78f5e1c430a493c1bc4d4e8298b4fa26 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 45.943 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS04435 78f5e1c430a493c1bc4d4e8298b4fa26 264 Gene3D G3DSA:3.30.572.10 1 264 8.8E-135 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS04435 78f5e1c430a493c1bc4d4e8298b4fa26 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 2.6E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS04435 78f5e1c430a493c1bc4d4e8298b4fa26 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 2.6E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS04435 78f5e1c430a493c1bc4d4e8298b4fa26 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 2.6E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS04435 78f5e1c430a493c1bc4d4e8298b4fa26 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 2.6E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS04435 78f5e1c430a493c1bc4d4e8298b4fa26 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.6E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS04435 78f5e1c430a493c1bc4d4e8298b4fa26 264 PANTHER PTHR11548 1 264 6.1E-195 T 22-04-2016 RPIC12D_RS04435 78f5e1c430a493c1bc4d4e8298b4fa26 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS04435 78f5e1c430a493c1bc4d4e8298b4fa26 264 SUPERFAMILY SSF55831 1 264 7.98E-130 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS04435 78f5e1c430a493c1bc4d4e8298b4fa26 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 1.4E-96 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS04435 78f5e1c430a493c1bc4d4e8298b4fa26 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 84 7.2E-40 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS01295 cc6b0ec6da7f8067ea7dcc9d0936ff4c 214 PANTHER PTHR11260 1 213 1.5E-94 T 22-04-2016 RPIC12D_RS01295 cc6b0ec6da7f8067ea7dcc9d0936ff4c 214 PANTHER PTHR11260:SF289 1 213 1.5E-94 T 22-04-2016 RPIC12D_RS01295 cc6b0ec6da7f8067ea7dcc9d0936ff4c 214 Gene3D G3DSA:1.20.1050.10 92 213 2.7E-53 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS01295 cc6b0ec6da7f8067ea7dcc9d0936ff4c 214 SUPERFAMILY SSF47616 83 212 1.95E-33 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS01295 cc6b0ec6da7f8067ea7dcc9d0936ff4c 214 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 4 213 2.4E-85 T 22-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 RPIC12D_RS01295 cc6b0ec6da7f8067ea7dcc9d0936ff4c 214 SUPERFAMILY SSF52833 2 85 2.24E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS01295 cc6b0ec6da7f8067ea7dcc9d0936ff4c 214 Pfam PF00043 Glutathione S-transferase, C-terminal domain 140 200 3.9E-8 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RPIC12D_RS01295 cc6b0ec6da7f8067ea7dcc9d0936ff4c 214 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 75 2.8E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC12D_RS01295 cc6b0ec6da7f8067ea7dcc9d0936ff4c 214 Gene3D G3DSA:3.40.30.10 3 91 1.6E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS09535 cf985e5cd750d522db49e7c6a72faf06 248 Pfam PF00121 Triosephosphate isomerase 6 245 8.0E-89 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RPIC12D_RS09535 cf985e5cd750d522db49e7c6a72faf06 248 PANTHER PTHR21139 3 245 1.1E-112 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RPIC12D_RS09535 cf985e5cd750d522db49e7c6a72faf06 248 SUPERFAMILY SSF51351 4 245 7.72E-89 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RPIC12D_RS09535 cf985e5cd750d522db49e7c6a72faf06 248 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 4 248 38.942 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RPIC12D_RS09535 cf985e5cd750d522db49e7c6a72faf06 248 Gene3D G3DSA:3.20.20.70 4 246 1.6E-101 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS09535 cf985e5cd750d522db49e7c6a72faf06 248 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 240 6.0E-63 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RPIC12D_RS09535 cf985e5cd750d522db49e7c6a72faf06 248 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RPIC12D_RS10995 b8d5e3506a0128a018134a1c40dd5c50 175 Pfam PF11749 Protein of unknown function (DUF3305) 15 162 1.5E-53 T 22-04-2016 IPR021736 Protein of unknown function DUF3305 RPIC12D_RS13930 b3f8fe22774f14d7bb1679605ac454ba 281 SUPERFAMILY SSF54675 7 110 6.47E-29 T 22-04-2016 RPIC12D_RS13930 b3f8fe22774f14d7bb1679605ac454ba 281 Gene3D G3DSA:3.20.20.70 132 265 4.2E-54 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS13930 b3f8fe22774f14d7bb1679605ac454ba 281 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 111 275 8.5E-54 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RPIC12D_RS13930 b3f8fe22774f14d7bb1679605ac454ba 281 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 22 109 5.0E-23 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 RPIC12D_RS13930 b3f8fe22774f14d7bb1679605ac454ba 281 SUPERFAMILY SSF51690 111 276 7.85E-56 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RPIC12D_RS13930 b3f8fe22774f14d7bb1679605ac454ba 281 PIRSF PIRSF006250 4 279 1.4E-93 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD RPIC12D_RS13930 b3f8fe22774f14d7bb1679605ac454ba 281 Gene3D G3DSA:3.90.1170.20 6 131 6.5E-45 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 RPIC12D_RS13930 b3f8fe22774f14d7bb1679605ac454ba 281 PANTHER PTHR32179 15 281 1.6E-114 T 22-04-2016 RPIC12D_RS13930 b3f8fe22774f14d7bb1679605ac454ba 281 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 13 275 3.0E-89 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 RPIC12D_RS08925 63a432cb6509ff739b455cfb2a8ab4b8 520 PANTHER PTHR32089 164 515 9.6E-152 T 22-04-2016 RPIC12D_RS08925 63a432cb6509ff739b455cfb2a8ab4b8 520 PANTHER PTHR32089:SF63 164 515 9.6E-152 T 22-04-2016 RPIC12D_RS08925 63a432cb6509ff739b455cfb2a8ab4b8 520 SMART SM00283 265 512 8.3E-85 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS08925 63a432cb6509ff739b455cfb2a8ab4b8 520 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 185 3.0E-14 T 22-04-2016 IPR024478 4HB MCP domain RPIC12D_RS08925 63a432cb6509ff739b455cfb2a8ab4b8 520 Gene3D G3DSA:1.10.287.950 279 484 1.8E-60 T 22-04-2016 RPIC12D_RS08925 63a432cb6509ff739b455cfb2a8ab4b8 520 SUPERFAMILY SSF58104 232 513 1.31E-72 T 22-04-2016 RPIC12D_RS08925 63a432cb6509ff739b455cfb2a8ab4b8 520 Pfam PF00672 HAMP domain 193 259 5.8E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS08925 63a432cb6509ff739b455cfb2a8ab4b8 520 SMART SM00304 212 264 6.4E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS08925 63a432cb6509ff739b455cfb2a8ab4b8 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 511 5.9E-58 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS08925 63a432cb6509ff739b455cfb2a8ab4b8 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 5.8E-55 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS08925 63a432cb6509ff739b455cfb2a8ab4b8 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 5.8E-55 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS08925 63a432cb6509ff739b455cfb2a8ab4b8 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 5.8E-55 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS08925 63a432cb6509ff739b455cfb2a8ab4b8 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 5.8E-55 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 Pfam PF02938 GAD domain 326 425 2.9E-27 T 22-04-2016 IPR029351 GAD domain RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 Gene3D G3DSA:3.30.1360.30 295 433 3.6E-44 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 PANTHER PTHR22594 389 595 6.2E-245 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 PANTHER PTHR22594 12 315 6.2E-245 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 SUPERFAMILY SSF50249 18 122 5.33E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 Pfam PF00152 tRNA synthetases class II (D, K and N) 136 582 1.5E-108 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 Gene3D G3DSA:2.40.50.140 18 124 2.2E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 18 606 5.1E-249 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 Gene3D G3DSA:3.30.930.10 434 608 1.2E-113 T 22-04-2016 RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 Gene3D G3DSA:3.30.930.10 149 294 1.2E-113 T 22-04-2016 RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 SUPERFAMILY SSF55261 309 434 1.06E-42 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 SUPERFAMILY SSF55681 448 608 5.18E-106 T 22-04-2016 RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 SUPERFAMILY SSF55681 128 310 5.18E-106 T 22-04-2016 RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 PRINTS PR01042 Aspartyl-tRNA synthetase signature 542 556 1.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 PRINTS PR01042 Aspartyl-tRNA synthetase signature 498 514 1.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 PRINTS PR01042 Aspartyl-tRNA synthetase signature 225 238 1.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 PANTHER PTHR22594:SF5 389 595 6.2E-245 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 PANTHER PTHR22594:SF5 12 315 6.2E-245 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 Pfam PF01336 OB-fold nucleic acid binding domain 35 119 5.4E-16 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RPIC12D_RS01770 ace0a9578f552e7a466dd8240121df46 623 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 18 587 36.234 T 22-04-2016 RPIC12D_RS06715 0564caf9e7a2ec290aa57467dbe5500a 177 SUPERFAMILY SSF56420 1 165 2.22E-58 T 22-04-2016 IPR023635 Peptide deformylase RPIC12D_RS06715 0564caf9e7a2ec290aa57467dbe5500a 177 PANTHER PTHR10458:SF4 1 165 3.5E-80 T 22-04-2016 RPIC12D_RS06715 0564caf9e7a2ec290aa57467dbe5500a 177 PRINTS PR01576 Peptide deformylase signature 128 157 2.0E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC12D_RS06715 0564caf9e7a2ec290aa57467dbe5500a 177 PRINTS PR01576 Peptide deformylase signature 33 62 2.0E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC12D_RS06715 0564caf9e7a2ec290aa57467dbe5500a 177 PRINTS PR01576 Peptide deformylase signature 109 127 2.0E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC12D_RS06715 0564caf9e7a2ec290aa57467dbe5500a 177 PRINTS PR01576 Peptide deformylase signature 97 108 2.0E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC12D_RS06715 0564caf9e7a2ec290aa57467dbe5500a 177 Gene3D G3DSA:3.90.45.10 1 163 2.6E-55 T 22-04-2016 IPR023635 Peptide deformylase RPIC12D_RS06715 0564caf9e7a2ec290aa57467dbe5500a 177 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 3 159 5.1E-36 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC12D_RS06715 0564caf9e7a2ec290aa57467dbe5500a 177 Pfam PF01327 Polypeptide deformylase 3 157 6.6E-49 T 22-04-2016 IPR023635 Peptide deformylase RPIC12D_RS06715 0564caf9e7a2ec290aa57467dbe5500a 177 PIRSF PIRSF004749 1 170 1.8E-50 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC12D_RS06715 0564caf9e7a2ec290aa57467dbe5500a 177 PANTHER PTHR10458 1 165 3.5E-80 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC12D_RS06715 0564caf9e7a2ec290aa57467dbe5500a 177 Hamap MF_00163 Peptide deformylase [def]. 1 170 27.216 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC12D_RS17880 d1f99d2db4abfa9dc4ce331b4e153e55 327 Pfam PF07287 Protein of unknown function (DUF1446) 2 174 1.2E-65 T 22-04-2016 IPR010839 Protein of unknown function DUF1446 RPIC12D_RS17880 d1f99d2db4abfa9dc4ce331b4e153e55 327 PANTHER PTHR13943:SF48 1 327 4.4E-90 T 22-04-2016 RPIC12D_RS17880 d1f99d2db4abfa9dc4ce331b4e153e55 327 PANTHER PTHR13943 1 327 4.4E-90 T 22-04-2016 RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 3.8E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 3.8E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 3.8E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 3.8E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 SUPERFAMILY SSF55785 92 162 3.43E-7 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 Pfam PF11808 Domain of unknown function (DUF3329) 10 89 2.0E-15 T 22-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 SMART SM00091 98 164 0.0018 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 Gene3D G3DSA:3.30.565.10 258 425 1.2E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 427 1.1E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 PANTHER PTHR24423:SF554 65 429 7.5E-111 T 22-04-2016 RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 6.8E-134 T 22-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 Gene3D G3DSA:1.10.287.130 198 257 2.2E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 SMART SM00387 316 428 1.2E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 SUPERFAMILY SSF55874 261 425 5.76E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 Pfam PF13188 PAS domain 99 154 1.0E-6 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 PANTHER PTHR24423 65 429 7.5E-111 T 22-04-2016 RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 271 3.9E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 SMART SM00388 206 272 5.1E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 SUPERFAMILY SSF47384 194 271 3.73E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS08625 27f8f2702344dbcb351da28f4791c2e8 442 Gene3D G3DSA:3.30.450.20 93 197 1.2E-12 T 22-04-2016 RPIC12D_RS13270 0792c440a2ec1a8c3ca98eab81ea1ce7 253 Gene3D G3DSA:1.10.530.10 98 204 1.5E-26 T 22-04-2016 RPIC12D_RS13270 0792c440a2ec1a8c3ca98eab81ea1ce7 253 Pfam PF01464 Transglycosylase SLT domain 98 189 7.9E-18 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RPIC12D_RS13270 0792c440a2ec1a8c3ca98eab81ea1ce7 253 PANTHER PTHR21666 82 188 5.6E-16 T 22-04-2016 RPIC12D_RS13270 0792c440a2ec1a8c3ca98eab81ea1ce7 253 SUPERFAMILY SSF53955 90 208 1.75E-29 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC12D_RS06515 81378caf40e30d4b4dcd62eca220138c 244 PANTHER PTHR28047 1 233 6.4E-67 T 22-04-2016 RPIC12D_RS06515 81378caf40e30d4b4dcd62eca220138c 244 PANTHER PTHR28047:SF1 1 233 6.4E-67 T 22-04-2016 RPIC12D_RS06515 81378caf40e30d4b4dcd62eca220138c 244 Pfam PF01177 Asp/Glu/Hydantoin racemase 3 207 9.9E-14 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS16110 9078959e0db58a992c4bc190f1468215 256 SUPERFAMILY SSF52540 5 247 6.77E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16110 9078959e0db58a992c4bc190f1468215 256 Gene3D G3DSA:3.40.50.300 3 246 1.8E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16110 9078959e0db58a992c4bc190f1468215 256 Pfam PF00005 ABC transporter 23 178 2.2E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS16110 9078959e0db58a992c4bc190f1468215 256 SMART SM00382 31 225 2.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS16110 9078959e0db58a992c4bc190f1468215 256 PANTHER PTHR24220:SF400 8 247 4.8E-120 T 22-04-2016 RPIC12D_RS16110 9078959e0db58a992c4bc190f1468215 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 225 247 5.8E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RPIC12D_RS16110 9078959e0db58a992c4bc190f1468215 256 PANTHER PTHR24220 8 247 4.8E-120 T 22-04-2016 RPIC12D_RS09645 dbaa166c1b3d61f0f3840c90f0eba000 194 Gene3D G3DSA:3.40.50.450 2 186 1.0E-75 T 22-04-2016 RPIC12D_RS09645 dbaa166c1b3d61f0f3840c90f0eba000 194 PANTHER PTHR31223 1 178 1.2E-88 T 22-04-2016 RPIC12D_RS09645 dbaa166c1b3d61f0f3840c90f0eba000 194 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 176 5.5E-66 T 22-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RPIC12D_RS09645 dbaa166c1b3d61f0f3840c90f0eba000 194 SUPERFAMILY SSF102405 1 177 3.82E-64 T 22-04-2016 RPIC12D_RS09645 dbaa166c1b3d61f0f3840c90f0eba000 194 Pfam PF03641 Possible lysine decarboxylase 46 174 2.4E-46 T 22-04-2016 IPR031100 LOG family RPIC12D_RS04125 8e143c3665d9fee1c99fda5bc4f2709d 210 Pfam PF01810 LysE type translocator 17 206 3.8E-32 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS04125 8e143c3665d9fee1c99fda5bc4f2709d 210 PIRSF PIRSF006324 1 209 1.5E-47 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS04125 8e143c3665d9fee1c99fda5bc4f2709d 210 PANTHER PTHR30086 2 210 1.7E-99 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS04125 8e143c3665d9fee1c99fda5bc4f2709d 210 PANTHER PTHR30086:SF7 2 210 1.7E-99 T 22-04-2016 RPIC12D_RS15330 346c9c4cccc58de258676d8373f07d1e 356 ProSitePatterns PS01043 Transposases, IS30 family, signature. 285 301 - T 22-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS15330 346c9c4cccc58de258676d8373f07d1e 356 Pfam PF13936 Helix-turn-helix domain 4 47 1.8E-13 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain RPIC12D_RS15330 346c9c4cccc58de258676d8373f07d1e 356 Gene3D G3DSA:1.10.10.60 7 42 7.4E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS15330 346c9c4cccc58de258676d8373f07d1e 356 Gene3D G3DSA:3.30.420.10 193 339 7.4E-13 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS15330 346c9c4cccc58de258676d8373f07d1e 356 Pfam PF00665 Integrase core domain 193 298 6.0E-15 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC12D_RS15330 346c9c4cccc58de258676d8373f07d1e 356 SUPERFAMILY SSF53098 193 339 7.59E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS15330 346c9c4cccc58de258676d8373f07d1e 356 PANTHER PTHR10948 1 351 8.3E-87 T 22-04-2016 RPIC12D_RS15865 346c9c4cccc58de258676d8373f07d1e 356 ProSitePatterns PS01043 Transposases, IS30 family, signature. 285 301 - T 22-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS15865 346c9c4cccc58de258676d8373f07d1e 356 Pfam PF13936 Helix-turn-helix domain 4 47 1.8E-13 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain RPIC12D_RS15865 346c9c4cccc58de258676d8373f07d1e 356 Gene3D G3DSA:1.10.10.60 7 42 7.4E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS15865 346c9c4cccc58de258676d8373f07d1e 356 Gene3D G3DSA:3.30.420.10 193 339 7.4E-13 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS15865 346c9c4cccc58de258676d8373f07d1e 356 Pfam PF00665 Integrase core domain 193 298 6.0E-15 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC12D_RS15865 346c9c4cccc58de258676d8373f07d1e 356 SUPERFAMILY SSF53098 193 339 7.59E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS15865 346c9c4cccc58de258676d8373f07d1e 356 PANTHER PTHR10948 1 351 8.3E-87 T 22-04-2016 RPIC12D_RS09625 68e28061f031c04ce95f2e0cb972c726 316 PANTHER PTHR34990 45 295 8.6E-123 T 22-04-2016 RPIC12D_RS09625 68e28061f031c04ce95f2e0cb972c726 316 Gene3D G3DSA:3.60.21.10 242 293 7.8E-33 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS09625 68e28061f031c04ce95f2e0cb972c726 316 Gene3D G3DSA:3.60.21.10 59 200 7.8E-33 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS09625 68e28061f031c04ce95f2e0cb972c726 316 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 61 273 1.4E-10 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type RPIC12D_RS09625 68e28061f031c04ce95f2e0cb972c726 316 PANTHER PTHR34990:SF2 45 295 8.6E-123 T 22-04-2016 RPIC12D_RS09625 68e28061f031c04ce95f2e0cb972c726 316 SUPERFAMILY SSF56300 235 304 3.14E-34 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS09625 68e28061f031c04ce95f2e0cb972c726 316 SUPERFAMILY SSF56300 59 176 3.14E-34 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS02775 976692422eb6479bcef3704598714faf 302 SMART SM01130 16 300 1.2E-88 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS02775 976692422eb6479bcef3704598714faf 302 PIRSF PIRSF001365 13 302 4.8E-71 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS02775 976692422eb6479bcef3704598714faf 302 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 22 299 1.3E-65 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS02775 976692422eb6479bcef3704598714faf 302 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 16 301 42.249 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS02775 976692422eb6479bcef3704598714faf 302 PANTHER PTHR12128 2 299 4.5E-72 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS02775 976692422eb6479bcef3704598714faf 302 PANTHER PTHR12128:SF34 2 299 4.5E-72 T 22-04-2016 RPIC12D_RS02775 976692422eb6479bcef3704598714faf 302 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 149 179 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS02775 976692422eb6479bcef3704598714faf 302 SUPERFAMILY SSF51569 15 299 2.09E-78 T 22-04-2016 RPIC12D_RS02775 976692422eb6479bcef3704598714faf 302 Gene3D G3DSA:3.20.20.70 11 299 1.6E-84 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS02775 976692422eb6479bcef3704598714faf 302 Pfam PF00701 Dihydrodipicolinate synthetase family 18 295 5.3E-47 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS02775 976692422eb6479bcef3704598714faf 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 52 73 5.1E-15 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS02775 976692422eb6479bcef3704598714faf 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 144 161 5.1E-15 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS02775 976692422eb6479bcef3704598714faf 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 119 135 5.1E-15 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 41 356 4.2E-105 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 Gene3D G3DSA:3.90.800.10 118 226 2.7E-43 T 22-04-2016 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 Gene3D G3DSA:3.40.50.620 41 109 8.7E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 Gene3D G3DSA:3.40.50.620 229 283 8.7E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 PANTHER PTHR11451:SF29 289 576 3.2E-214 T 22-04-2016 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 PANTHER PTHR11451:SF29 41 264 3.2E-214 T 22-04-2016 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 PRINTS PR00987 Glutamyl-tRNA synthetase signature 227 237 3.1E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 PRINTS PR00987 Glutamyl-tRNA synthetase signature 44 56 3.1E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 PRINTS PR00987 Glutamyl-tRNA synthetase signature 58 69 3.1E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 PRINTS PR00987 Glutamyl-tRNA synthetase signature 73 86 3.1E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 PANTHER PTHR11451 289 576 3.2E-214 T 22-04-2016 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 PANTHER PTHR11451 41 264 3.2E-214 T 22-04-2016 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 Gene3D G3DSA:2.40.240.10 370 485 7.0E-47 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 362 553 4.4E-57 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 58 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 41 576 2.6E-225 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 SUPERFAMILY SSF52374 40 367 1.08E-94 T 22-04-2016 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 574 52.98 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 Gene3D G3DSA:1.10.1160.10 284 360 4.9E-35 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 Gene3D G3DSA:2.40.240.10 486 572 7.6E-35 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RPIC12D_RS04025 1aa7261c5abc218a590499579a0ca0be 576 SUPERFAMILY SSF50715 362 573 1.99E-74 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 RPIC12D_RS08180 ee38b9384158a73f6586432593cf8178 267 Gene3D G3DSA:3.90.850.10 1 267 3.2E-86 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC12D_RS08180 ee38b9384158a73f6586432593cf8178 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 267 2.6E-137 T 22-04-2016 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase GO:0019439 UniPathway: UPA00208 RPIC12D_RS08180 ee38b9384158a73f6586432593cf8178 267 SUPERFAMILY SSF56529 2 267 8.7E-79 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC12D_RS08180 ee38b9384158a73f6586432593cf8178 267 PANTHER PTHR30143 1 267 1.7E-97 T 22-04-2016 RPIC12D_RS12010 5650d914a3fd6be7eb3823ef264b8895 467 Pfam PF02601 Exonuclease VII, large subunit 146 455 1.9E-96 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 RPIC12D_RS12010 5650d914a3fd6be7eb3823ef264b8895 467 PANTHER PTHR30008:SF0 22 461 3.6E-152 T 22-04-2016 RPIC12D_RS12010 5650d914a3fd6be7eb3823ef264b8895 467 PANTHER PTHR30008 22 461 3.6E-152 T 22-04-2016 RPIC12D_RS12010 5650d914a3fd6be7eb3823ef264b8895 467 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 27 459 27.74 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RPIC12D_RS12010 5650d914a3fd6be7eb3823ef264b8895 467 Pfam PF13742 OB-fold nucleic acid binding domain 30 122 7.4E-29 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 RPIC12D_RS12010 5650d914a3fd6be7eb3823ef264b8895 467 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 31 377 3.6E-130 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RPIC12D_RS01185 70b9816d2e267e96efce4a7f603f1d8b 202 SUPERFAMILY SSF110111 70 189 1.96E-45 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain RPIC12D_RS01185 70b9816d2e267e96efce4a7f603f1d8b 202 Gene3D G3DSA:2.60.370.10 70 194 3.1E-49 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain RPIC12D_RS01185 70b9816d2e267e96efce4a7f603f1d8b 202 PANTHER PTHR21320 11 187 1.6E-38 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 RPIC12D_RS01185 70b9816d2e267e96efce4a7f603f1d8b 202 PANTHER PTHR21320:SF3 11 187 1.6E-38 T 22-04-2016 RPIC12D_RS01185 70b9816d2e267e96efce4a7f603f1d8b 202 PIRSF PIRSF005413 6 201 8.0E-65 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 RPIC12D_RS01185 70b9816d2e267e96efce4a7f603f1d8b 202 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 43 186 5.4E-49 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 RPIC12D_RS16745 267c8eec291beb65cf8004a8e23205bb 334 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 227 1.9E-13 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RPIC12D_RS16745 267c8eec291beb65cf8004a8e23205bb 334 SUPERFAMILY SSF51735 1 292 2.41E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS16745 267c8eec291beb65cf8004a8e23205bb 334 PANTHER PTHR12126 5 319 1.6E-53 T 22-04-2016 RPIC12D_RS16745 267c8eec291beb65cf8004a8e23205bb 334 Gene3D G3DSA:3.40.50.720 2 248 2.3E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS11755 f98cfb2bfd174a75e021e0f73d4b4a60 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site RPIC12D_RS11755 f98cfb2bfd174a75e021e0f73d4b4a60 67 Pfam PF00313 'Cold-shock' DNA-binding domain 4 66 8.8E-30 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIC12D_RS11755 f98cfb2bfd174a75e021e0f73d4b4a60 67 Gene3D G3DSA:2.40.50.140 1 65 2.9E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS11755 f98cfb2bfd174a75e021e0f73d4b4a60 67 PANTHER PTHR11544 1 67 2.5E-37 T 22-04-2016 RPIC12D_RS11755 f98cfb2bfd174a75e021e0f73d4b4a60 67 PRINTS PR00050 Cold shock protein signature 25 34 4.6E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIC12D_RS11755 f98cfb2bfd174a75e021e0f73d4b4a60 67 PRINTS PR00050 Cold shock protein signature 40 58 4.6E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIC12D_RS11755 f98cfb2bfd174a75e021e0f73d4b4a60 67 PRINTS PR00050 Cold shock protein signature 4 19 4.6E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIC12D_RS11755 f98cfb2bfd174a75e021e0f73d4b4a60 67 PIRSF PIRSF002599 1 67 2.3E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 RPIC12D_RS11755 f98cfb2bfd174a75e021e0f73d4b4a60 67 SUPERFAMILY SSF50249 1 65 2.69E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS11755 f98cfb2bfd174a75e021e0f73d4b4a60 67 SMART SM00357 3 67 2.8E-29 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 RPIC12D_RS04380 887f77e8677ca9b80e68643ebdd2e29c 128 PANTHER PTHR15680 2 123 2.0E-53 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS04380 887f77e8677ca9b80e68643ebdd2e29c 128 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS04380 887f77e8677ca9b80e68643ebdd2e29c 128 SUPERFAMILY SSF50104 1 119 3.61E-45 T 22-04-2016 IPR008991 Translation protein SH3-like domain RPIC12D_RS04380 887f77e8677ca9b80e68643ebdd2e29c 128 PIRSF PIRSF002191 1 128 3.1E-52 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS04380 887f77e8677ca9b80e68643ebdd2e29c 128 Pfam PF01245 Ribosomal protein L19 2 117 4.6E-47 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS04380 887f77e8677ca9b80e68643ebdd2e29c 128 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 118 30.878 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS04380 887f77e8677ca9b80e68643ebdd2e29c 128 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 117 4.1E-49 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS04380 887f77e8677ca9b80e68643ebdd2e29c 128 PRINTS PR00061 Ribosomal protein L19 signature 8 37 1.2E-34 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS04380 887f77e8677ca9b80e68643ebdd2e29c 128 PRINTS PR00061 Ribosomal protein L19 signature 38 67 1.2E-34 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS04380 887f77e8677ca9b80e68643ebdd2e29c 128 PRINTS PR00061 Ribosomal protein L19 signature 92 117 1.2E-34 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS23440 ad1a5475120d088f142f5b230ea69655 97 Pfam PF01145 SPFH domain / Band 7 family 2 88 5.0E-11 T 22-04-2016 IPR001107 Band 7 domain RPIC12D_RS23440 ad1a5475120d088f142f5b230ea69655 97 SUPERFAMILY SSF117892 11 72 5.49E-5 T 22-04-2016 IPR001107 Band 7 domain RPIC12D_RS04085 4cc877e73addf11ee4079bd2dcfad208 462 Gene3D G3DSA:2.40.50.140 394 455 2.1E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04085 4cc877e73addf11ee4079bd2dcfad208 462 SUPERFAMILY SSF52096 22 211 4.68E-26 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS04085 4cc877e73addf11ee4079bd2dcfad208 462 PANTHER PTHR33507 11 457 1.6E-143 T 22-04-2016 RPIC12D_RS04085 4cc877e73addf11ee4079bd2dcfad208 462 PANTHER PTHR33507:SF1 11 457 1.6E-143 T 22-04-2016 RPIC12D_RS04085 4cc877e73addf11ee4079bd2dcfad208 462 SUPERFAMILY SSF141322 383 456 1.14E-11 T 22-04-2016 RPIC12D_RS04085 4cc877e73addf11ee4079bd2dcfad208 462 Pfam PF01957 NfeD-like C-terminal, partner-binding 312 455 5.9E-41 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain RPIC12D_RS04085 4cc877e73addf11ee4079bd2dcfad208 462 Gene3D G3DSA:3.90.226.10 32 132 3.9E-16 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS04085 4cc877e73addf11ee4079bd2dcfad208 462 Gene3D G3DSA:3.90.226.10 187 221 3.9E-16 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS20170 663bdd84953f7d22ee808aac546ca34f 168 Gene3D G3DSA:3.40.50.720 9 103 1.3E-8 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS20170 663bdd84953f7d22ee808aac546ca34f 168 PANTHER PTHR10366 2 123 2.0E-40 T 22-04-2016 RPIC12D_RS20170 663bdd84953f7d22ee808aac546ca34f 168 Pfam PF02719 Polysaccharide biosynthesis protein 2 139 2.2E-44 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RPIC12D_RS20170 663bdd84953f7d22ee808aac546ca34f 168 PANTHER PTHR10366:SF360 2 123 2.0E-40 T 22-04-2016 RPIC12D_RS20170 663bdd84953f7d22ee808aac546ca34f 168 SUPERFAMILY SSF51735 15 117 7.51E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS08105 72a62b3a03a2680cece38b493eae20df 305 Pfam PF00892 EamA-like transporter family 24 157 2.5E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS08105 72a62b3a03a2680cece38b493eae20df 305 Pfam PF00892 EamA-like transporter family 172 303 9.4E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS08105 72a62b3a03a2680cece38b493eae20df 305 SUPERFAMILY SSF103481 210 304 3.4E-13 T 22-04-2016 RPIC12D_RS08105 72a62b3a03a2680cece38b493eae20df 305 SUPERFAMILY SSF103481 51 159 7.85E-9 T 22-04-2016 RPIC12D_RS08105 72a62b3a03a2680cece38b493eae20df 305 PANTHER PTHR32322 7 304 2.9E-101 T 22-04-2016 RPIC12D_RS08105 72a62b3a03a2680cece38b493eae20df 305 PANTHER PTHR32322:SF11 7 304 2.9E-101 T 22-04-2016 RPIC12D_RS08100 d24b94b5fbb672777e0041386cffc5b2 147 SUPERFAMILY SSF54637 7 141 3.26E-41 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS08100 d24b94b5fbb672777e0041386cffc5b2 147 Pfam PF03061 Thioesterase superfamily 27 109 4.7E-16 T 22-04-2016 IPR006683 Thioesterase domain RPIC12D_RS08100 d24b94b5fbb672777e0041386cffc5b2 147 Gene3D G3DSA:3.10.129.10 4 142 1.4E-55 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS08100 d24b94b5fbb672777e0041386cffc5b2 147 PANTHER PTHR31793:SF7 4 144 6.1E-62 T 22-04-2016 RPIC12D_RS08100 d24b94b5fbb672777e0041386cffc5b2 147 PANTHER PTHR31793 4 144 6.1E-62 T 22-04-2016 RPIC12D_RS16040 985e10a515b3d91a0459fa92989b27b4 217 PANTHER PTHR24322:SF57 143 173 3.8E-12 T 22-04-2016 RPIC12D_RS16040 985e10a515b3d91a0459fa92989b27b4 217 PANTHER PTHR24322:SF57 21 127 3.8E-12 T 22-04-2016 RPIC12D_RS16040 985e10a515b3d91a0459fa92989b27b4 217 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 44 208 1.3E-16 T 22-04-2016 RPIC12D_RS16040 985e10a515b3d91a0459fa92989b27b4 217 SUPERFAMILY SSF51735 15 210 6.05E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS16040 985e10a515b3d91a0459fa92989b27b4 217 PANTHER PTHR24322 143 173 3.8E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS16040 985e10a515b3d91a0459fa92989b27b4 217 PANTHER PTHR24322 21 127 3.8E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS16040 985e10a515b3d91a0459fa92989b27b4 217 Gene3D G3DSA:3.40.50.720 16 205 3.3E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS16040 985e10a515b3d91a0459fa92989b27b4 217 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 4.7E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS16040 985e10a515b3d91a0459fa92989b27b4 217 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 4.7E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS16040 985e10a515b3d91a0459fa92989b27b4 217 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 4.7E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS16040 985e10a515b3d91a0459fa92989b27b4 217 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 4.7E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS16040 985e10a515b3d91a0459fa92989b27b4 217 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 4.7E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07305 e19f998bc0b89d21f15cfc16f02d1a21 353 Gene3D G3DSA:3.40.50.300 12 248 3.2E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07305 e19f998bc0b89d21f15cfc16f02d1a21 353 PANTHER PTHR24220 14 260 5.1E-113 T 22-04-2016 RPIC12D_RS07305 e19f998bc0b89d21f15cfc16f02d1a21 353 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS07305 e19f998bc0b89d21f15cfc16f02d1a21 353 SUPERFAMILY SSF52540 13 254 8.91E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07305 e19f998bc0b89d21f15cfc16f02d1a21 353 Pfam PF00005 ABC transporter 28 175 2.6E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS07305 e19f998bc0b89d21f15cfc16f02d1a21 353 SMART SM00382 37 225 7.0E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS07305 e19f998bc0b89d21f15cfc16f02d1a21 353 SUPERFAMILY SSF50331 251 351 3.4E-13 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RPIC12D_RS07305 e19f998bc0b89d21f15cfc16f02d1a21 353 Pfam PF08402 TOBE domain 283 349 1.2E-8 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RPIC12D_RS07305 e19f998bc0b89d21f15cfc16f02d1a21 353 PANTHER PTHR24220:SF150 14 260 5.1E-113 T 22-04-2016 RPIC12D_RS12320 cc57d4b435d597fcd16e625ef2f50145 235 PANTHER PTHR30183 1 231 8.8E-85 T 22-04-2016 RPIC12D_RS12320 cc57d4b435d597fcd16e625ef2f50145 235 SUPERFAMILY SSF161098 7 225 3.92E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS12320 cc57d4b435d597fcd16e625ef2f50145 235 PANTHER PTHR30183:SF4 1 231 8.8E-85 T 22-04-2016 RPIC12D_RS12320 cc57d4b435d597fcd16e625ef2f50145 235 Gene3D G3DSA:1.10.3720.10 16 232 1.8E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS12320 cc57d4b435d597fcd16e625ef2f50145 235 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 226 1.3E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS03145 2bda95280341170936e76695d3d11399 125 PANTHER PTHR33055 25 98 3.0E-27 T 22-04-2016 RPIC12D_RS03145 2bda95280341170936e76695d3d11399 125 PANTHER PTHR33055:SF2 25 98 3.0E-27 T 22-04-2016 RPIC12D_RS05725 7cff2eeca980f270b07ce3b1d99d8af9 368 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 342 5.2E-86 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RPIC12D_RS05725 7cff2eeca980f270b07ce3b1d99d8af9 368 Gene3D G3DSA:3.20.20.70 2 363 2.5E-138 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS05725 7cff2eeca980f270b07ce3b1d99d8af9 368 SUPERFAMILY SSF51395 3 366 3.38E-127 T 22-04-2016 RPIC12D_RS05725 7cff2eeca980f270b07ce3b1d99d8af9 368 PANTHER PTHR22893 5 368 6.9E-171 T 22-04-2016 RPIC12D_RS07970 7c6472477542cc1d0ed8f90ef9842896 393 Gene3D G3DSA:3.40.47.10 3 123 1.7E-77 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS07970 7c6472477542cc1d0ed8f90ef9842896 393 Gene3D G3DSA:3.40.47.10 194 276 1.7E-77 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS07970 7c6472477542cc1d0ed8f90ef9842896 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RPIC12D_RS07970 7c6472477542cc1d0ed8f90ef9842896 393 SUPERFAMILY SSF53901 271 392 3.42E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS07970 7c6472477542cc1d0ed8f90ef9842896 393 Pfam PF00108 Thiolase, N-terminal domain 4 262 1.5E-107 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RPIC12D_RS07970 7c6472477542cc1d0ed8f90ef9842896 393 Gene3D G3DSA:3.40.47.10 277 392 1.7E-72 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS07970 7c6472477542cc1d0ed8f90ef9842896 393 Gene3D G3DSA:3.40.47.10 142 193 1.7E-72 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS07970 7c6472477542cc1d0ed8f90ef9842896 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RPIC12D_RS07970 7c6472477542cc1d0ed8f90ef9842896 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RPIC12D_RS07970 7c6472477542cc1d0ed8f90ef9842896 393 SUPERFAMILY SSF53901 3 270 6.26E-89 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS07970 7c6472477542cc1d0ed8f90ef9842896 393 Pfam PF02803 Thiolase, C-terminal domain 270 392 3.5E-54 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RPIC12D_RS07970 7c6472477542cc1d0ed8f90ef9842896 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 1.7E-150 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC12D_RS07970 7c6472477542cc1d0ed8f90ef9842896 393 PANTHER PTHR18919 1 393 3.3E-231 T 22-04-2016 RPIC12D_RS07970 7c6472477542cc1d0ed8f90ef9842896 393 PANTHER PTHR18919:SF95 1 393 3.3E-231 T 22-04-2016 RPIC12D_RS07970 7c6472477542cc1d0ed8f90ef9842896 393 PIRSF PIRSF000429 1 393 2.5E-133 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC12D_RS00160 c79d6ebb73dbdcfa5fe83357069fb8e8 297 PANTHER PTHR30606 8 297 6.2E-70 T 22-04-2016 RPIC12D_RS00160 c79d6ebb73dbdcfa5fe83357069fb8e8 297 PIRSF PIRSF026649 1 297 2.1E-81 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RPIC12D_RS00160 c79d6ebb73dbdcfa5fe83357069fb8e8 297 PANTHER PTHR30606:SF5 8 297 6.2E-70 T 22-04-2016 RPIC12D_RS00160 c79d6ebb73dbdcfa5fe83357069fb8e8 297 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 287 7.6E-60 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RPIC12D_RS11710 85d0d7fdaaad8cebf40bceaca64b6df4 332 Pfam PF01687 Riboflavin kinase 183 306 2.8E-35 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 RPIC12D_RS11710 85d0d7fdaaad8cebf40bceaca64b6df4 332 SUPERFAMILY SSF52374 15 177 1.8E-38 T 22-04-2016 RPIC12D_RS11710 85d0d7fdaaad8cebf40bceaca64b6df4 332 PANTHER PTHR22749 1 308 8.6E-117 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 RPIC12D_RS11710 85d0d7fdaaad8cebf40bceaca64b6df4 332 Gene3D G3DSA:3.40.50.620 10 185 8.8E-67 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS11710 85d0d7fdaaad8cebf40bceaca64b6df4 332 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 17 306 1.1E-90 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 RPIC12D_RS11710 85d0d7fdaaad8cebf40bceaca64b6df4 332 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 17 75 8.3E-8 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIC12D_RS11710 85d0d7fdaaad8cebf40bceaca64b6df4 332 SMART SM00904 182 307 8.1E-55 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 RPIC12D_RS11710 85d0d7fdaaad8cebf40bceaca64b6df4 332 SUPERFAMILY SSF82114 173 307 9.37E-42 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 RPIC12D_RS11710 85d0d7fdaaad8cebf40bceaca64b6df4 332 PIRSF PIRSF004491 2 309 8.2E-98 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 RPIC12D_RS11710 85d0d7fdaaad8cebf40bceaca64b6df4 332 PANTHER PTHR22749:SF0 1 308 8.6E-117 T 22-04-2016 RPIC12D_RS11710 85d0d7fdaaad8cebf40bceaca64b6df4 332 Pfam PF06574 FAD synthetase 11 165 9.5E-56 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 RPIC12D_RS11710 85d0d7fdaaad8cebf40bceaca64b6df4 332 Gene3D G3DSA:2.40.30.30 187 307 6.6E-39 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 RPIC12D_RS14815 d1289b91e66c6da7de6fc137f680dc29 263 Pfam PF09906 Uncharacterized protein conserved in bacteria (DUF2135) 193 249 1.7E-15 T 22-04-2016 IPR019220 Domain of unknown function DUF2135 RPIC12D_RS14815 d1289b91e66c6da7de6fc137f680dc29 263 PIRSF PIRSF012281 1 263 1.1E-123 T 22-04-2016 IPR012039 Uncharacterised conserved protein UCP012281 RPIC12D_RS09450 3a1cd3ca0b3f15f8d0c987f2a4876d30 104 Pfam PF10993 Protein of unknown function (DUF2818) 8 98 1.0E-36 T 22-04-2016 IPR016768 Uncharacterised conserved protein UCP019883, membrane RPIC12D_RS09450 3a1cd3ca0b3f15f8d0c987f2a4876d30 104 PIRSF PIRSF019883 1 102 1.3E-47 T 22-04-2016 IPR016768 Uncharacterised conserved protein UCP019883, membrane RPIC12D_RS05965 80138be138248e85753f66bd75c06cf9 293 Gene3D G3DSA:1.10.3720.10 61 290 1.1E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS05965 80138be138248e85753f66bd75c06cf9 293 SUPERFAMILY SSF161098 55 282 1.7E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS05965 80138be138248e85753f66bd75c06cf9 293 PANTHER PTHR32243 4 292 1.6E-102 T 22-04-2016 RPIC12D_RS05965 80138be138248e85753f66bd75c06cf9 293 PANTHER PTHR32243:SF13 4 292 1.6E-102 T 22-04-2016 RPIC12D_RS05965 80138be138248e85753f66bd75c06cf9 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 292 2.5E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS00205 f3113f63c609a2674478555657183421 170 Pfam PF01047 MarR family 63 118 5.4E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS00205 f3113f63c609a2674478555657183421 170 ProSitePatterns PS01117 MarR-type HTH domain signature. 94 128 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site RPIC12D_RS00205 f3113f63c609a2674478555657183421 170 PANTHER PTHR33164:SF4 5 165 1.5E-32 T 22-04-2016 RPIC12D_RS00205 f3113f63c609a2674478555657183421 170 PANTHER PTHR33164 5 165 1.5E-32 T 22-04-2016 RPIC12D_RS00205 f3113f63c609a2674478555657183421 170 SMART SM00347 52 155 6.1E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS00205 f3113f63c609a2674478555657183421 170 SUPERFAMILY SSF46785 20 165 8.73E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00205 f3113f63c609a2674478555657183421 170 Gene3D G3DSA:1.10.10.10 20 165 4.6E-38 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00205 f3113f63c609a2674478555657183421 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 96 111 6.0E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS00205 f3113f63c609a2674478555657183421 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 131 6.0E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS00205 f3113f63c609a2674478555657183421 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 145 165 6.0E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS00205 f3113f63c609a2674478555657183421 170 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 95 6.0E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS08505 f4a65ce97014ac48a5f65bad04bec0c4 173 SUPERFAMILY SSF160719 49 154 3.66E-7 T 22-04-2016 RPIC12D_RS08505 f4a65ce97014ac48a5f65bad04bec0c4 173 PANTHER PTHR38595:SF1 8 170 8.0E-52 T 22-04-2016 RPIC12D_RS08505 f4a65ce97014ac48a5f65bad04bec0c4 173 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 16 167 4.1E-19 T 22-04-2016 IPR017737 Type VI secretion system, lysozyme-related protein RPIC12D_RS08505 f4a65ce97014ac48a5f65bad04bec0c4 173 PANTHER PTHR38595 8 170 8.0E-52 T 22-04-2016 RPIC12D_RS08505 f4a65ce97014ac48a5f65bad04bec0c4 173 Pfam PF04965 Gene 25-like lysozyme 43 147 1.2E-18 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD RPIC12D_RS16680 16970c85f59ea7c981e4c6bd3e103f23 303 PANTHER PTHR20858:SF17 3 288 3.3E-118 T 22-04-2016 RPIC12D_RS16680 16970c85f59ea7c981e4c6bd3e103f23 303 PANTHER PTHR20858 3 288 3.3E-118 T 22-04-2016 RPIC12D_RS16680 16970c85f59ea7c981e4c6bd3e103f23 303 Gene3D G3DSA:3.40.1190.20 18 283 7.7E-100 T 22-04-2016 IPR029056 Ribokinase-like RPIC12D_RS16680 16970c85f59ea7c981e4c6bd3e103f23 303 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 21 283 1.1E-92 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RPIC12D_RS16680 16970c85f59ea7c981e4c6bd3e103f23 303 SUPERFAMILY SSF53613 18 285 5.46E-77 T 22-04-2016 IPR029056 Ribokinase-like RPIC12D_RS16680 16970c85f59ea7c981e4c6bd3e103f23 303 Pfam PF08543 Phosphomethylpyrimidine kinase 28 282 2.0E-91 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 RPIC12D_RS27020 33c30063fd0316f5cb0eff0626a88b79 99 SUPERFAMILY SSF53335 1 97 7.97E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS27020 33c30063fd0316f5cb0eff0626a88b79 99 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 1 93 4.2E-15 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RPIC12D_RS01075 5718a9c603fff834bf2266fd252c14af 112 PANTHER PTHR30115:SF12 1 112 3.8E-68 T 22-04-2016 RPIC12D_RS01075 5718a9c603fff834bf2266fd252c14af 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 RPIC12D_RS01075 5718a9c603fff834bf2266fd252c14af 112 SMART SM00938 4 105 6.1E-68 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC12D_RS01075 5718a9c603fff834bf2266fd252c14af 112 SUPERFAMILY SSF54913 1 112 8.26E-47 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RPIC12D_RS01075 5718a9c603fff834bf2266fd252c14af 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.4E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC12D_RS01075 5718a9c603fff834bf2266fd252c14af 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 RPIC12D_RS01075 5718a9c603fff834bf2266fd252c14af 112 Gene3D G3DSA:3.30.70.120 1 112 5.6E-52 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RPIC12D_RS01075 5718a9c603fff834bf2266fd252c14af 112 PIRSF PIRSF039144 1 112 8.1E-55 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC12D_RS01075 5718a9c603fff834bf2266fd252c14af 112 PANTHER PTHR30115 1 112 3.8E-68 T 22-04-2016 RPIC12D_RS01075 5718a9c603fff834bf2266fd252c14af 112 PRINTS PR00340 P-II protein signature 23 41 1.7E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC12D_RS01075 5718a9c603fff834bf2266fd252c14af 112 PRINTS PR00340 P-II protein signature 2 17 1.7E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC12D_RS01075 5718a9c603fff834bf2266fd252c14af 112 PRINTS PR00340 P-II protein signature 52 75 1.7E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC12D_RS01075 5718a9c603fff834bf2266fd252c14af 112 PRINTS PR00340 P-II protein signature 83 103 1.7E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC12D_RS00255 6fbeb7d97171917be98100e618b17da6 250 SUPERFAMILY SSF48498 106 223 6.88E-12 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC12D_RS00255 6fbeb7d97171917be98100e618b17da6 250 PANTHER PTHR30055 8 229 1.4E-17 T 22-04-2016 RPIC12D_RS00255 6fbeb7d97171917be98100e618b17da6 250 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 75 6.9E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS00255 6fbeb7d97171917be98100e618b17da6 250 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 5.5E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS00255 6fbeb7d97171917be98100e618b17da6 250 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 5.5E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS00255 6fbeb7d97171917be98100e618b17da6 250 SUPERFAMILY SSF46689 21 89 3.03E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS00255 6fbeb7d97171917be98100e618b17da6 250 Gene3D G3DSA:1.10.357.10 15 223 2.1E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC12D_RS08345 640c5737ccb9aa14426639d9e5c93dcf 137 Gene3D G3DSA:3.10.50.40 17 135 3.4E-48 T 22-04-2016 RPIC12D_RS08345 640c5737ccb9aa14426639d9e5c93dcf 137 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 45 133 1.9E-30 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RPIC12D_RS08345 640c5737ccb9aa14426639d9e5c93dcf 137 SUPERFAMILY SSF54534 28 135 5.7E-45 T 22-04-2016 RPIC12D_RS08345 640c5737ccb9aa14426639d9e5c93dcf 137 PANTHER PTHR10516 10 135 7.4E-52 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RPIC12D_RS15850 3074a6097f6345b9f77180d21d03b83a 979 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 30 970 0.0 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 RPIC12D_RS15850 3074a6097f6345b9f77180d21d03b83a 979 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 21 976 25.972 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 RPIC12D_RS15850 3074a6097f6345b9f77180d21d03b83a 979 SUPERFAMILY SSF53383 949 971 1.38E-96 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS15850 3074a6097f6345b9f77180d21d03b83a 979 SUPERFAMILY SSF53383 490 906 1.38E-96 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS15850 3074a6097f6345b9f77180d21d03b83a 979 PANTHER PTHR11773 5 979 0.0 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RPIC12D_RS15850 3074a6097f6345b9f77180d21d03b83a 979 Pfam PF02347 Glycine cleavage system P-protein 496 756 7.4E-12 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RPIC12D_RS15850 3074a6097f6345b9f77180d21d03b83a 979 Pfam PF02347 Glycine cleavage system P-protein 29 459 6.9E-173 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RPIC12D_RS15850 3074a6097f6345b9f77180d21d03b83a 979 Gene3D G3DSA:3.40.640.10 522 795 5.8E-42 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS15850 3074a6097f6345b9f77180d21d03b83a 979 Gene3D G3DSA:3.40.640.10 103 325 4.6E-13 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS15850 3074a6097f6345b9f77180d21d03b83a 979 SUPERFAMILY SSF53383 29 462 2.97E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS15850 3074a6097f6345b9f77180d21d03b83a 979 PANTHER PTHR11773:SF1 5 979 0.0 T 22-04-2016 RPIC12D_RS11620 a355c7cf01ebd197d133fe259f4da2c1 375 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 347 5.6E-51 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS11620 a355c7cf01ebd197d133fe259f4da2c1 375 PANTHER PTHR30482:SF10 1 363 7.4E-112 T 22-04-2016 RPIC12D_RS11620 a355c7cf01ebd197d133fe259f4da2c1 375 PANTHER PTHR30482 1 363 7.4E-112 T 22-04-2016 RPIC12D_RS02425 e863e89bb2f48298ec51beac71195973 175 SUPERFAMILY SSF52540 8 124 4.45E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS02425 e863e89bb2f48298ec51beac71195973 175 PANTHER PTHR40072:SF2 6 119 9.2E-25 T 22-04-2016 RPIC12D_RS02425 e863e89bb2f48298ec51beac71195973 175 PANTHER PTHR40072 6 119 9.2E-25 T 22-04-2016 RPIC12D_RS02425 e863e89bb2f48298ec51beac71195973 175 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 8 168 2.0E-40 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 RPIC12D_RS02425 e863e89bb2f48298ec51beac71195973 175 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 8 140 1.1E-44 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 RPIC12D_RS02425 e863e89bb2f48298ec51beac71195973 175 Gene3D G3DSA:3.40.50.300 7 170 4.1E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04615 88397a7b3b5fd3287e42dad149248164 252 SUPERFAMILY SSF48452 78 153 6.32E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS04615 88397a7b3b5fd3287e42dad149248164 252 Pfam PF14559 Tetratricopeptide repeat 99 155 2.6E-8 T 22-04-2016 RPIC12D_RS04615 88397a7b3b5fd3287e42dad149248164 252 PIRSF PIRSF030959 1 252 1.1E-101 T 22-04-2016 IPR014562 Uncharacterised conserved protein UCP030959, divergent TPR repeat-containing RPIC12D_RS04615 88397a7b3b5fd3287e42dad149248164 252 Gene3D G3DSA:1.25.40.10 82 225 6.2E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS04320 c711be1552c199d6bc9d741147b24db4 594 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 449 1.2E-27 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS04320 c711be1552c199d6bc9d741147b24db4 594 SUPERFAMILY SSF47203 281 454 1.22E-45 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS04320 c711be1552c199d6bc9d741147b24db4 594 SUPERFAMILY SSF56645 35 271 1.44E-57 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC12D_RS04320 c711be1552c199d6bc9d741147b24db4 594 PANTHER PTHR10909 3 474 8.4E-192 T 22-04-2016 RPIC12D_RS04320 c711be1552c199d6bc9d741147b24db4 594 Gene3D G3DSA:2.40.110.10 160 266 3.4E-24 T 22-04-2016 RPIC12D_RS04320 c711be1552c199d6bc9d741147b24db4 594 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 2 33 1.2E-13 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RPIC12D_RS04320 c711be1552c199d6bc9d741147b24db4 594 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 270 7.6E-14 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC12D_RS04320 c711be1552c199d6bc9d741147b24db4 594 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 36 156 5.5E-14 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS04320 c711be1552c199d6bc9d741147b24db4 594 PANTHER PTHR10909:SF296 3 474 8.4E-192 T 22-04-2016 RPIC12D_RS04320 c711be1552c199d6bc9d741147b24db4 594 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 477 587 5.6E-26 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RPIC12D_RS04320 c711be1552c199d6bc9d741147b24db4 594 Gene3D G3DSA:1.10.540.10 34 157 4.1E-21 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS04320 c711be1552c199d6bc9d741147b24db4 594 Gene3D G3DSA:1.20.140.10 267 457 2.6E-54 T 22-04-2016 RPIC12D_RS03305 54a521b507232eecb576ad7cf0e5034b 209 Pfam PF11679 Protein of unknown function (DUF3275) 2 205 2.0E-91 T 22-04-2016 IPR021693 Protein of unknown function DUF3275 RPIC12D_RS11330 336fac3d5b3d87481cc10e5446096a6e 146 Pfam PF11681 Protein of unknown function (DUF3277) 1 144 8.3E-64 T 22-04-2016 IPR021695 Bacteriophage rv5, Orf52 RPIC12D_RS09660 8a09f8178be31df694d394672d8b077f 844 PANTHER PTHR30287 1 844 2.8E-123 T 22-04-2016 RPIC12D_RS09660 8a09f8178be31df694d394672d8b077f 844 Pfam PF02687 FtsX-like permease family 274 380 1.1E-9 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RPIC12D_RS09660 8a09f8178be31df694d394672d8b077f 844 Pfam PF02687 FtsX-like permease family 723 835 1.1E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RPIC12D_RS17130 b12304282001a7619888a100c69a8f74 280 Pfam PF00072 Response regulator receiver domain 5 117 8.8E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS17130 b12304282001a7619888a100c69a8f74 280 PANTHER PTHR26402:SF576 3 231 9.9E-70 T 22-04-2016 RPIC12D_RS17130 b12304282001a7619888a100c69a8f74 280 SUPERFAMILY SSF52172 3 128 1.71E-28 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS17130 b12304282001a7619888a100c69a8f74 280 Gene3D G3DSA:1.10.10.10 128 232 3.5E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS17130 b12304282001a7619888a100c69a8f74 280 SMART SM00448 3 116 7.2E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS17130 b12304282001a7619888a100c69a8f74 280 PANTHER PTHR26402 3 231 9.9E-70 T 22-04-2016 RPIC12D_RS17130 b12304282001a7619888a100c69a8f74 280 SUPERFAMILY SSF46894 126 231 1.08E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS17130 b12304282001a7619888a100c69a8f74 280 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 7.0E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS17130 b12304282001a7619888a100c69a8f74 280 SMART SM00862 155 230 2.5E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS17130 b12304282001a7619888a100c69a8f74 280 Gene3D G3DSA:3.40.50.2300 3 127 7.2E-26 T 22-04-2016 RPIC12D_RS00180 e010069d879a4d63e0f46eb968f43c14 261 SUPERFAMILY SSF56219 2 256 5.37E-73 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC12D_RS00180 e010069d879a4d63e0f46eb968f43c14 261 PANTHER PTHR22748 1 256 4.3E-95 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RPIC12D_RS00180 e010069d879a4d63e0f46eb968f43c14 261 Gene3D G3DSA:3.60.10.10 1 256 8.5E-91 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC12D_RS00180 e010069d879a4d63e0f46eb968f43c14 261 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 253 2.1E-71 T 22-04-2016 RPIC12D_RS00180 e010069d879a4d63e0f46eb968f43c14 261 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 2 255 6.0E-76 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RPIC12D_RS00180 e010069d879a4d63e0f46eb968f43c14 261 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 RPIC12D_RS00180 e010069d879a4d63e0f46eb968f43c14 261 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 248 1.0E-21 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC12D_RS16645 f0d698f905d6f2007fa8d3b24b1f23df 275 SUPERFAMILY SSF110399 11 253 1.1E-81 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 RPIC12D_RS16645 f0d698f905d6f2007fa8d3b24b1f23df 275 Pfam PF05690 Thiazole biosynthesis protein ThiG 15 261 1.6E-108 T 22-04-2016 RPIC12D_RS16645 f0d698f905d6f2007fa8d3b24b1f23df 275 PANTHER PTHR34266 7 272 7.9E-133 T 22-04-2016 RPIC12D_RS16645 f0d698f905d6f2007fa8d3b24b1f23df 275 Gene3D G3DSA:3.20.20.70 12 272 9.5E-52 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS16645 f0d698f905d6f2007fa8d3b24b1f23df 275 Hamap MF_00443 Thiazole synthase [thiG]. 12 267 41.722 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 6.3E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 PRINTS PR00458 Haem peroxidase superfamily signature 255 270 6.3E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 6.3E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 PRINTS PR00458 Haem peroxidase superfamily signature 314 329 6.3E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 6.3E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 Gene3D G3DSA:1.10.420.10 306 403 2.3E-44 T 22-04-2016 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 Gene3D G3DSA:1.10.420.10 248 270 2.3E-44 T 22-04-2016 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 PANTHER PTHR30555 1 718 0.0 T 22-04-2016 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 SUPERFAMILY SSF48113 431 718 1.43E-104 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 PANTHER PTHR30555:SF0 1 718 0.0 T 22-04-2016 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 255 265 - T 22-04-2016 IPR019793 Peroxidases heam-ligand binding site RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 SUPERFAMILY SSF48113 23 425 2.65E-144 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 22-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 Hamap MF_01961 Catalase-peroxidase [katG]. 2 719 40.2 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 19 719 0.0 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 1.6E-53 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 263 286 1.6E-53 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 1.6E-53 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 475 501 1.6E-53 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 1.6E-53 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 Pfam PF00141 Peroxidase 76 391 8.8E-48 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 Pfam PF00141 Peroxidase 398 691 3.6E-32 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 Gene3D G3DSA:1.10.520.10 697 719 2.5E-54 T 22-04-2016 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 Gene3D G3DSA:1.10.520.10 48 201 2.5E-71 T 22-04-2016 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 Gene3D G3DSA:1.10.520.10 235 247 2.5E-71 T 22-04-2016 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 Gene3D G3DSA:1.10.520.10 428 574 2.5E-54 T 22-04-2016 RPIC12D_RS12570 ebf3c38426b2d0d5c4f7447eba6064dd 721 Gene3D G3DSA:1.10.420.10 575 693 1.4E-42 T 22-04-2016 RPIC12D_RS06795 8278a6fe412c271fd37ff735d931cc3a 167 SUPERFAMILY SSF54637 18 161 1.03E-48 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS06795 8278a6fe412c271fd37ff735d931cc3a 167 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 18 157 5.9E-60 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RPIC12D_RS06795 8278a6fe412c271fd37ff735d931cc3a 167 Pfam PF07977 FabA-like domain 27 153 1.5E-37 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RPIC12D_RS06795 8278a6fe412c271fd37ff735d931cc3a 167 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 18 160 34.844 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RPIC12D_RS06795 8278a6fe412c271fd37ff735d931cc3a 167 Gene3D G3DSA:3.10.129.10 17 159 1.7E-58 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS06795 8278a6fe412c271fd37ff735d931cc3a 167 PANTHER PTHR30272 18 162 3.6E-75 T 22-04-2016 RPIC12D_RS00615 fd1b0f290950aff80a0fc5a207dbade0 362 PIRSF PIRSF001619 17 339 9.3E-136 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RPIC12D_RS00615 fd1b0f290950aff80a0fc5a207dbade0 362 Gene3D G3DSA:3.20.20.70 26 332 3.6E-105 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS00615 fd1b0f290950aff80a0fc5a207dbade0 362 PANTHER PTHR22976:SF19 22 361 2.4E-167 T 22-04-2016 RPIC12D_RS00615 fd1b0f290950aff80a0fc5a207dbade0 362 SMART SM00729 63 275 2.2E-39 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC12D_RS00615 fd1b0f290950aff80a0fc5a207dbade0 362 TIGRFAM TIGR00433 bioB: biotin synthase 35 330 2.6E-125 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RPIC12D_RS00615 fd1b0f290950aff80a0fc5a207dbade0 362 Hamap MF_01694 Biotin synthase [bioB]. 25 333 42.709 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RPIC12D_RS00615 fd1b0f290950aff80a0fc5a207dbade0 362 SUPERFAMILY SSF102114 25 331 1.02E-92 T 22-04-2016 RPIC12D_RS00615 fd1b0f290950aff80a0fc5a207dbade0 362 SMART SM00876 240 332 1.6E-48 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RPIC12D_RS00615 fd1b0f290950aff80a0fc5a207dbade0 362 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 240 330 1.5E-20 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RPIC12D_RS00615 fd1b0f290950aff80a0fc5a207dbade0 362 PANTHER PTHR22976 22 361 2.4E-167 T 22-04-2016 RPIC12D_RS00615 fd1b0f290950aff80a0fc5a207dbade0 362 Pfam PF04055 Radical SAM superfamily 70 221 8.3E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC12D_RS05140 4509c2e4e871083fd79493886469ccb4 64 Gene3D G3DSA:1.10.10.60 14 49 1.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS05140 4509c2e4e871083fd79493886469ccb4 64 SUPERFAMILY SSF46689 1 60 4.57E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS05140 4509c2e4e871083fd79493886469ccb4 64 PANTHER PTHR33609 2 59 5.5E-19 T 22-04-2016 RPIC12D_RS05140 4509c2e4e871083fd79493886469ccb4 64 Pfam PF01527 Transposase 2 58 2.0E-13 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS11225 2c32985b388f33bd06c75b0a5e61a0a1 294 PANTHER PTHR22981 1 289 7.5E-98 T 22-04-2016 RPIC12D_RS11225 2c32985b388f33bd06c75b0a5e61a0a1 294 SUPERFAMILY SSF48179 163 287 1.11E-31 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS11225 2c32985b388f33bd06c75b0a5e61a0a1 294 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 8.7E-51 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RPIC12D_RS11225 2c32985b388f33bd06c75b0a5e61a0a1 294 SUPERFAMILY SSF51735 3 163 2.82E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS11225 2c32985b388f33bd06c75b0a5e61a0a1 294 Gene3D G3DSA:3.40.50.720 2 163 1.1E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS11225 2c32985b388f33bd06c75b0a5e61a0a1 294 Gene3D G3DSA:1.10.1040.10 165 290 4.5E-35 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC12D_RS11225 2c32985b388f33bd06c75b0a5e61a0a1 294 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 RPIC12D_RS11225 2c32985b388f33bd06c75b0a5e61a0a1 294 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 285 3.5E-26 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RPIC12D_RS11225 2c32985b388f33bd06c75b0a5e61a0a1 294 PIRSF PIRSF000103 1 294 1.1E-68 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 RPIC12D_RS13200 c5aa40e9919bfcdaeb9c97d42cca4a02 402 PANTHER PTHR23409:SF18 53 397 9.4E-147 T 22-04-2016 RPIC12D_RS13200 c5aa40e9919bfcdaeb9c97d42cca4a02 402 PANTHER PTHR23409 53 397 9.4E-147 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 RPIC12D_RS13200 c5aa40e9919bfcdaeb9c97d42cca4a02 402 Pfam PF00268 Ribonucleotide reductase, small chain 82 369 4.1E-81 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 RPIC12D_RS13200 c5aa40e9919bfcdaeb9c97d42cca4a02 402 PIRSF PIRSF000355 54 402 1.2E-131 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 RPIC12D_RS13200 c5aa40e9919bfcdaeb9c97d42cca4a02 402 SUPERFAMILY SSF47240 65 373 1.27E-95 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC12D_RS13200 c5aa40e9919bfcdaeb9c97d42cca4a02 402 Gene3D G3DSA:1.10.620.20 63 377 8.3E-111 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RPIC12D_RS04210 ca79af5bbbb937c89a16f5493e8c0a21 378 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 13 377 50.289 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 RPIC12D_RS04210 ca79af5bbbb937c89a16f5493e8c0a21 378 Gene3D G3DSA:3.40.640.10 28 275 4.1E-106 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS04210 ca79af5bbbb937c89a16f5493e8c0a21 378 PANTHER PTHR21152 11 375 6.7E-178 T 22-04-2016 RPIC12D_RS04210 ca79af5bbbb937c89a16f5493e8c0a21 378 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 15 375 5.7E-151 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 RPIC12D_RS04210 ca79af5bbbb937c89a16f5493e8c0a21 378 PIRSF PIRSF000525 9 378 9.8E-155 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 RPIC12D_RS04210 ca79af5bbbb937c89a16f5493e8c0a21 378 Gene3D G3DSA:3.90.1150.10 276 375 4.8E-42 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS04210 ca79af5bbbb937c89a16f5493e8c0a21 378 Pfam PF00266 Aminotransferase class-V 15 366 9.6E-50 T 22-04-2016 IPR000192 Aminotransferase class V domain RPIC12D_RS04210 ca79af5bbbb937c89a16f5493e8c0a21 378 SUPERFAMILY SSF53383 14 375 2.53E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS04210 ca79af5bbbb937c89a16f5493e8c0a21 378 PANTHER PTHR21152:SF1 11 375 6.7E-178 T 22-04-2016 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 Gene3D G3DSA:3.30.230.10 224 405 3.5E-38 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 PRINTS PR00418 DNA topoisomerase II family signature 432 446 1.3E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 PRINTS PR00418 DNA topoisomerase II family signature 284 297 1.3E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 PRINTS PR00418 DNA topoisomerase II family signature 591 607 1.3E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 PRINTS PR00418 DNA topoisomerase II family signature 33 48 1.3E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 PRINTS PR00418 DNA topoisomerase II family signature 501 517 1.3E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 PRINTS PR00418 DNA topoisomerase II family signature 114 128 1.3E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 PRINTS PR00418 DNA topoisomerase II family signature 539 551 1.3E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 PRINTS PR00418 DNA topoisomerase II family signature 68 81 1.3E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 PRINTS PR00418 DNA topoisomerase II family signature 519 536 1.3E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 PANTHER PTHR10169 4 661 0.0 T 22-04-2016 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 Pfam PF00204 DNA gyrase B 267 403 1.5E-33 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 177 1.6E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 PANTHER PTHR10169:SF45 4 661 0.0 T 22-04-2016 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 SUPERFAMILY SSF54211 260 405 6.64E-36 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 Pfam PF01751 Toprim domain 431 535 3.2E-12 T 22-04-2016 IPR006171 Toprim domain RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 Gene3D G3DSA:3.30.565.10 17 220 1.0E-67 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 SMART SM00387 29 179 7.6E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 Gene3D G3DSA:3.40.50.670 416 640 5.1E-75 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 SMART SM00433 35 655 1.1E-184 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 ProSitePatterns PS00177 DNA topoisomerase II signature. 434 442 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 SUPERFAMILY SSF55874 6 221 1.28E-55 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 4 659 44.065 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 SUPERFAMILY SSF56719 406 652 4.45E-74 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 587 651 7.4E-24 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 PRINTS PR01098 Topoisomerase IV subunit B signature 356 379 1.5E-29 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 PRINTS PR01098 Topoisomerase IV subunit B signature 329 344 1.5E-29 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 PRINTS PR01098 Topoisomerase IV subunit B signature 140 154 1.5E-29 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 PRINTS PR01098 Topoisomerase IV subunit B signature 312 328 1.5E-29 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 PRINTS PR01098 Topoisomerase IV subunit B signature 28 41 1.5E-29 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 PRINTS PR01098 Topoisomerase IV subunit B signature 466 487 1.5E-29 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS04495 0197a270d1b4997e8e12d999f25a3f94 661 PRINTS PR01098 Topoisomerase IV subunit B signature 380 405 1.5E-29 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC12D_RS15125 57bae7415f6cf47bccb74f5296d37e94 340 Gene3D G3DSA:3.40.50.1820 47 322 8.6E-64 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS15125 57bae7415f6cf47bccb74f5296d37e94 340 SUPERFAMILY SSF53474 46 322 1.5E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS15125 57bae7415f6cf47bccb74f5296d37e94 340 PANTHER PTHR10992 45 323 2.1E-52 T 22-04-2016 RPIC12D_RS15125 57bae7415f6cf47bccb74f5296d37e94 340 Pfam PF12697 Alpha/beta hydrolase family 74 313 3.8E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS15125 57bae7415f6cf47bccb74f5296d37e94 340 PRINTS PR00412 Epoxide hydrolase signature 161 174 5.2E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC12D_RS15125 57bae7415f6cf47bccb74f5296d37e94 340 PRINTS PR00412 Epoxide hydrolase signature 265 281 5.2E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC12D_RS15125 57bae7415f6cf47bccb74f5296d37e94 340 PRINTS PR00412 Epoxide hydrolase signature 147 160 5.2E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC12D_RS15125 57bae7415f6cf47bccb74f5296d37e94 340 PRINTS PR00412 Epoxide hydrolase signature 78 96 5.2E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC12D_RS15125 57bae7415f6cf47bccb74f5296d37e94 340 PRINTS PR00412 Epoxide hydrolase signature 298 320 5.2E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC12D_RS15125 57bae7415f6cf47bccb74f5296d37e94 340 PRINTS PR00111 Alpha/beta hydrolase fold signature 147 160 4.2E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS15125 57bae7415f6cf47bccb74f5296d37e94 340 PRINTS PR00111 Alpha/beta hydrolase fold signature 161 174 4.2E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS15125 57bae7415f6cf47bccb74f5296d37e94 340 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 112 4.2E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS15125 57bae7415f6cf47bccb74f5296d37e94 340 PRINTS PR00111 Alpha/beta hydrolase fold signature 267 281 4.2E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS09395 f47652bc482a35a2bfe7cc8c542bca18 230 Pfam PF00005 ABC transporter 17 159 1.2E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS09395 f47652bc482a35a2bfe7cc8c542bca18 230 PANTHER PTHR24220 3 230 3.7E-126 T 22-04-2016 RPIC12D_RS09395 f47652bc482a35a2bfe7cc8c542bca18 230 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 230 3.1E-104 T 22-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE RPIC12D_RS09395 f47652bc482a35a2bfe7cc8c542bca18 230 SMART SM00382 26 209 2.8E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS09395 f47652bc482a35a2bfe7cc8c542bca18 230 PANTHER PTHR24220:SF404 3 230 3.7E-126 T 22-04-2016 RPIC12D_RS09395 f47652bc482a35a2bfe7cc8c542bca18 230 SUPERFAMILY SSF52540 2 219 9.48E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09395 f47652bc482a35a2bfe7cc8c542bca18 230 Gene3D G3DSA:3.40.50.300 1 219 3.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06235 fd1970ecb35a6c56ae41c37f7ca13666 258 Gene3D G3DSA:2.40.30.10 4 97 6.5E-31 T 22-04-2016 RPIC12D_RS06235 fd1970ecb35a6c56ae41c37f7ca13666 258 PANTHER PTHR19370:SF98 4 257 5.1E-121 T 22-04-2016 RPIC12D_RS06235 fd1970ecb35a6c56ae41c37f7ca13666 258 SUPERFAMILY SSF63380 6 99 1.42E-25 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RPIC12D_RS06235 fd1970ecb35a6c56ae41c37f7ca13666 258 Pfam PF00970 Oxidoreductase FAD-binding domain 16 98 6.5E-10 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RPIC12D_RS06235 fd1970ecb35a6c56ae41c37f7ca13666 258 Pfam PF00175 Oxidoreductase NAD-binding domain 113 230 3.6E-7 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RPIC12D_RS06235 fd1970ecb35a6c56ae41c37f7ca13666 258 Gene3D G3DSA:3.40.50.80 98 257 4.1E-46 T 22-04-2016 RPIC12D_RS06235 fd1970ecb35a6c56ae41c37f7ca13666 258 SUPERFAMILY SSF52343 102 256 5.37E-41 T 22-04-2016 RPIC12D_RS06235 fd1970ecb35a6c56ae41c37f7ca13666 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 51 58 6.6E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC12D_RS06235 fd1970ecb35a6c56ae41c37f7ca13666 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 6.6E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC12D_RS06235 fd1970ecb35a6c56ae41c37f7ca13666 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 6.6E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC12D_RS06235 fd1970ecb35a6c56ae41c37f7ca13666 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 136 145 1.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC12D_RS06235 fd1970ecb35a6c56ae41c37f7ca13666 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 1.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC12D_RS06235 fd1970ecb35a6c56ae41c37f7ca13666 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 1.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC12D_RS06235 fd1970ecb35a6c56ae41c37f7ca13666 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 1.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC12D_RS06235 fd1970ecb35a6c56ae41c37f7ca13666 258 PANTHER PTHR19370 4 257 5.1E-121 T 22-04-2016 RPIC12D_RS03410 bb533caa8c795e2e168552ab6afd289a 248 Pfam PF13462 Thioredoxin 59 203 7.6E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS03410 bb533caa8c795e2e168552ab6afd289a 248 SUPERFAMILY SSF52833 49 223 2.02E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS03410 bb533caa8c795e2e168552ab6afd289a 248 Gene3D G3DSA:3.40.30.10 58 226 1.3E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS03410 bb533caa8c795e2e168552ab6afd289a 248 PANTHER PTHR13887 50 227 1.8E-13 T 22-04-2016 RPIC12D_RS03800 7331eb02a5edb7060f4358930d4f11b3 300 PANTHER PTHR30468:SF18 1 299 1.0E-120 T 22-04-2016 RPIC12D_RS03800 7331eb02a5edb7060f4358930d4f11b3 300 SUPERFAMILY SSF51197 26 299 3.21E-81 T 22-04-2016 RPIC12D_RS03800 7331eb02a5edb7060f4358930d4f11b3 300 PANTHER PTHR30468 1 299 1.0E-120 T 22-04-2016 RPIC12D_RS03800 7331eb02a5edb7060f4358930d4f11b3 300 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 21 293 5.7E-63 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 RPIC12D_RS03800 7331eb02a5edb7060f4358930d4f11b3 300 Gene3D G3DSA:3.60.130.10 17 299 1.1E-84 T 22-04-2016 RPIC12D_RS08075 5c1388f003e9704c3485e383f925e58c 469 SUPERFAMILY SSF100950 132 293 6.7E-34 T 22-04-2016 RPIC12D_RS08075 5c1388f003e9704c3485e383f925e58c 469 SUPERFAMILY SSF100950 61 86 6.7E-34 T 22-04-2016 RPIC12D_RS08075 5c1388f003e9704c3485e383f925e58c 469 Pfam PF11870 Domain of unknown function (DUF3390) 392 466 6.0E-15 T 22-04-2016 IPR024569 4Fe-4S binding protein, C-terminal RPIC12D_RS08075 5c1388f003e9704c3485e383f925e58c 469 Gene3D G3DSA:3.40.50.10420 62 125 6.4E-43 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RPIC12D_RS08075 5c1388f003e9704c3485e383f925e58c 469 Gene3D G3DSA:3.40.50.10420 187 293 6.4E-43 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RPIC12D_RS08075 5c1388f003e9704c3485e383f925e58c 469 PANTHER PTHR32479:SF10 55 467 2.9E-152 T 22-04-2016 RPIC12D_RS08075 5c1388f003e9704c3485e383f925e58c 469 Pfam PF13183 4Fe-4S dicluster domain 307 374 1.2E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC12D_RS08075 5c1388f003e9704c3485e383f925e58c 469 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 310 321 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC12D_RS08075 5c1388f003e9704c3485e383f925e58c 469 SUPERFAMILY SSF54862 308 401 3.39E-14 T 22-04-2016 RPIC12D_RS08075 5c1388f003e9704c3485e383f925e58c 469 PANTHER PTHR32479 55 467 2.9E-152 T 22-04-2016 RPIC12D_RS08075 5c1388f003e9704c3485e383f925e58c 469 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 68 292 2.2E-50 T 22-04-2016 IPR003741 LUD domain RPIC12D_RS08075 5c1388f003e9704c3485e383f925e58c 469 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 18 451 1.8E-136 T 22-04-2016 IPR004452 4Fe-4S binding protein GO:0019516 RPIC12D_RS08075 5c1388f003e9704c3485e383f925e58c 469 Gene3D G3DSA:1.10.1060.10 305 397 6.1E-12 T 22-04-2016 RPIC12D_RS08670 ee8c31f0ae8309c0b6cef6a76fc2934c 628 SUPERFAMILY SSF140990 404 599 9.81E-72 T 22-04-2016 RPIC12D_RS08670 ee8c31f0ae8309c0b6cef6a76fc2934c 628 PANTHER PTHR23076 5 601 0.0 T 22-04-2016 RPIC12D_RS08670 ee8c31f0ae8309c0b6cef6a76fc2934c 628 SUPERFAMILY SSF52540 148 393 1.3E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08670 ee8c31f0ae8309c0b6cef6a76fc2934c 628 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 RPIC12D_RS08670 ee8c31f0ae8309c0b6cef6a76fc2934c 628 Pfam PF01434 Peptidase family M41 384 590 3.1E-77 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 RPIC12D_RS08670 ee8c31f0ae8309c0b6cef6a76fc2934c 628 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 597 37.109 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RPIC12D_RS08670 ee8c31f0ae8309c0b6cef6a76fc2934c 628 Gene3D G3DSA:3.40.50.300 149 333 6.6E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08670 ee8c31f0ae8309c0b6cef6a76fc2934c 628 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 2.8E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS08670 ee8c31f0ae8309c0b6cef6a76fc2934c 628 Pfam PF06480 FtsH Extracellular 11 77 2.8E-8 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 RPIC12D_RS08670 ee8c31f0ae8309c0b6cef6a76fc2934c 628 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 591 3.6E-233 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RPIC12D_RS08670 ee8c31f0ae8309c0b6cef6a76fc2934c 628 SMART SM00382 186 325 2.5E-26 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS08670 ee8c31f0ae8309c0b6cef6a76fc2934c 628 Gene3D G3DSA:1.10.8.60 334 407 5.5E-29 T 22-04-2016 RPIC12D_RS02850 75fb6e1ca032c27ec0c82136f1e8501c 265 Pfam PF01553 Acyltransferase 84 194 9.3E-22 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RPIC12D_RS02850 75fb6e1ca032c27ec0c82136f1e8501c 265 SUPERFAMILY SSF69593 37 262 7.19E-27 T 22-04-2016 RPIC12D_RS02850 75fb6e1ca032c27ec0c82136f1e8501c 265 PANTHER PTHR10434 23 198 9.9E-39 T 22-04-2016 RPIC12D_RS02850 75fb6e1ca032c27ec0c82136f1e8501c 265 SMART SM00563 86 198 7.6E-33 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RPIC12D_RS02850 75fb6e1ca032c27ec0c82136f1e8501c 265 Gene3D G3DSA:3.40.1130.10 57 255 1.5E-13 T 22-04-2016 RPIC12D_RS02850 75fb6e1ca032c27ec0c82136f1e8501c 265 PANTHER PTHR10434:SF8 23 198 9.9E-39 T 22-04-2016 RPIC12D_RS00730 6f1ec90bd7b34be1d44f99b06ab383d1 141 Pfam PF05957 Bacterial protein of unknown function (DUF883) 43 130 7.8E-13 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB RPIC12D_RS10625 50469f1763a5f5e15ebc90cfa4d7e830 111 Pfam PF03413 Peptidase propeptide and YPEB domain 39 95 8.5E-10 T 22-04-2016 IPR025711 PepSY domain RPIC12D_RS00550 7ba26544881f2610e672590c66b108d1 384 Gene3D G3DSA:1.10.540.10 11 126 5.7E-36 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS00550 7ba26544881f2610e672590c66b108d1 384 PANTHER PTHR10909 11 381 6.9E-202 T 22-04-2016 RPIC12D_RS00550 7ba26544881f2610e672590c66b108d1 384 SUPERFAMILY SSF47203 231 381 7.57E-42 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS00550 7ba26544881f2610e672590c66b108d1 384 SUPERFAMILY SSF56645 10 246 2.09E-79 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC12D_RS00550 7ba26544881f2610e672590c66b108d1 384 Gene3D G3DSA:2.40.110.10 128 221 4.0E-38 T 22-04-2016 RPIC12D_RS00550 7ba26544881f2610e672590c66b108d1 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 381 3.3E-45 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS00550 7ba26544881f2610e672590c66b108d1 384 PANTHER PTHR10909:SF204 11 381 6.9E-202 T 22-04-2016 RPIC12D_RS00550 7ba26544881f2610e672590c66b108d1 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 124 1.2E-30 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS00550 7ba26544881f2610e672590c66b108d1 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 221 1.8E-24 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC12D_RS00550 7ba26544881f2610e672590c66b108d1 384 Gene3D G3DSA:1.20.140.10 222 381 1.0E-59 T 22-04-2016 RPIC12D_RS14785 ca4a6b7baa13e50eae118d79f91c74c1 125 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.666 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS14785 ca4a6b7baa13e50eae118d79f91c74c1 125 Gene3D G3DSA:2.40.50.140 1 123 7.6E-67 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS14785 ca4a6b7baa13e50eae118d79f91c74c1 125 SUPERFAMILY SSF50249 2 123 1.11E-52 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS14785 ca4a6b7baa13e50eae118d79f91c74c1 125 PANTHER PTHR11652 1 116 3.2E-76 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14785 ca4a6b7baa13e50eae118d79f91c74c1 125 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14785 ca4a6b7baa13e50eae118d79f91c74c1 125 Pfam PF00164 Ribosomal protein S12/S23 5 123 5.4E-44 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14785 ca4a6b7baa13e50eae118d79f91c74c1 125 PIRSF PIRSF002133 1 124 1.7E-55 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14785 ca4a6b7baa13e50eae118d79f91c74c1 125 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.4E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS14785 ca4a6b7baa13e50eae118d79f91c74c1 125 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.4E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS14785 ca4a6b7baa13e50eae118d79f91c74c1 125 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.4E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS14785 ca4a6b7baa13e50eae118d79f91c74c1 125 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.4E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS14785 ca4a6b7baa13e50eae118d79f91c74c1 125 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.4E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS14785 ca4a6b7baa13e50eae118d79f91c74c1 125 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.4E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS14785 ca4a6b7baa13e50eae118d79f91c74c1 125 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 4.1E-71 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS08965 d2f9bdc9581d2c95810c5e0fedbd1bd8 280 Pfam PF01177 Asp/Glu/Hydantoin racemase 9 216 7.1E-38 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS08965 d2f9bdc9581d2c95810c5e0fedbd1bd8 280 Hamap MF_00258 Glutamate racemase [murI]. 7 257 36.754 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS08965 d2f9bdc9581d2c95810c5e0fedbd1bd8 280 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 73 81 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS08965 d2f9bdc9581d2c95810c5e0fedbd1bd8 280 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 182 192 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS08965 d2f9bdc9581d2c95810c5e0fedbd1bd8 280 SUPERFAMILY SSF53681 112 256 6.54E-35 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS08965 d2f9bdc9581d2c95810c5e0fedbd1bd8 280 Gene3D G3DSA:3.40.50.1860 6 175 2.2E-54 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS08965 d2f9bdc9581d2c95810c5e0fedbd1bd8 280 PANTHER PTHR21198:SF2 1 265 4.1E-98 T 22-04-2016 RPIC12D_RS08965 d2f9bdc9581d2c95810c5e0fedbd1bd8 280 SUPERFAMILY SSF53681 8 109 2.09E-34 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS08965 d2f9bdc9581d2c95810c5e0fedbd1bd8 280 PANTHER PTHR21198 1 265 4.1E-98 T 22-04-2016 RPIC12D_RS08965 d2f9bdc9581d2c95810c5e0fedbd1bd8 280 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 248 1.3E-65 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS16115 68fd8a2cec1621abea52158c69ca1545 544 PANTHER PTHR11552:SF51 2 542 1.5E-218 T 22-04-2016 RPIC12D_RS16115 68fd8a2cec1621abea52158c69ca1545 544 PIRSF PIRSF000137 1 540 3.4E-154 T 22-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 RPIC12D_RS16115 68fd8a2cec1621abea52158c69ca1545 544 Gene3D G3DSA:3.50.50.60 2 126 1.1E-124 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS16115 68fd8a2cec1621abea52158c69ca1545 544 Gene3D G3DSA:3.50.50.60 187 313 1.1E-124 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS16115 68fd8a2cec1621abea52158c69ca1545 544 Gene3D G3DSA:3.50.50.60 466 533 1.1E-124 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS16115 68fd8a2cec1621abea52158c69ca1545 544 SUPERFAMILY SSF51905 472 533 4.37E-92 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS16115 68fd8a2cec1621abea52158c69ca1545 544 SUPERFAMILY SSF51905 3 288 4.37E-92 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS16115 68fd8a2cec1621abea52158c69ca1545 544 SUPERFAMILY SSF54373 290 473 2.85E-61 T 22-04-2016 RPIC12D_RS16115 68fd8a2cec1621abea52158c69ca1545 544 Pfam PF05199 GMC oxidoreductase 387 525 1.8E-41 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 RPIC12D_RS16115 68fd8a2cec1621abea52158c69ca1545 544 Pfam PF00732 GMC oxidoreductase 4 295 3.4E-80 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS16115 68fd8a2cec1621abea52158c69ca1545 544 PANTHER PTHR11552 2 542 1.5E-218 T 22-04-2016 RPIC12D_RS00780 f26aab9dfe42df6b252d7f30c1ee264e 85 Pfam PF12091 Protein of unknown function (DUF3567) 1 85 4.4E-36 T 22-04-2016 IPR021951 Protein of unknown function DUF3567 RPIC12D_RS14075 95cb1c3619c463b8fc12dd3d8aaa2e30 122 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 32 105 1.9E-17 T 22-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 RPIC12D_RS14075 95cb1c3619c463b8fc12dd3d8aaa2e30 122 PANTHER PTHR36835 13 122 3.6E-37 T 22-04-2016 RPIC12D_RS14075 95cb1c3619c463b8fc12dd3d8aaa2e30 122 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 26 120 5.6E-38 T 22-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 RPIC12D_RS06550 0cf4d2767b09c4d1641dca1a4f40b76b 485 Pfam PF07690 Major Facilitator Superfamily 28 417 1.3E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS06550 0cf4d2767b09c4d1641dca1a4f40b76b 485 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 23 427 2.3E-78 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RPIC12D_RS06550 0cf4d2767b09c4d1641dca1a4f40b76b 485 SUPERFAMILY SSF103473 256 476 1.07E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS06550 0cf4d2767b09c4d1641dca1a4f40b76b 485 SUPERFAMILY SSF103473 13 200 1.07E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS06550 0cf4d2767b09c4d1641dca1a4f40b76b 485 Gene3D G3DSA:1.20.1250.20 17 198 1.3E-27 T 22-04-2016 RPIC12D_RS06550 0cf4d2767b09c4d1641dca1a4f40b76b 485 PRINTS PR01036 Tetracycline resistance protein TetB signature 345 365 1.5E-12 T 22-04-2016 RPIC12D_RS06550 0cf4d2767b09c4d1641dca1a4f40b76b 485 PRINTS PR01036 Tetracycline resistance protein TetB signature 117 137 1.5E-12 T 22-04-2016 RPIC12D_RS06550 0cf4d2767b09c4d1641dca1a4f40b76b 485 PRINTS PR01036 Tetracycline resistance protein TetB signature 147 171 1.5E-12 T 22-04-2016 RPIC12D_RS06550 0cf4d2767b09c4d1641dca1a4f40b76b 485 PRINTS PR01036 Tetracycline resistance protein TetB signature 26 50 1.5E-12 T 22-04-2016 RPIC12D_RS06550 0cf4d2767b09c4d1641dca1a4f40b76b 485 PANTHER PTHR23501 18 478 6.3E-101 T 22-04-2016 RPIC12D_RS06550 0cf4d2767b09c4d1641dca1a4f40b76b 485 Gene3D G3DSA:1.20.1250.20 273 475 1.1E-12 T 22-04-2016 RPIC12D_RS10915 4b4c95220e0fa4d1be76edb859a594ce 215 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 212 9.8E-28 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10915 4b4c95220e0fa4d1be76edb859a594ce 215 SUPERFAMILY SSF88659 135 212 1.07E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10915 4b4c95220e0fa4d1be76edb859a594ce 215 SUPERFAMILY SSF88946 28 128 5.89E-26 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10915 4b4c95220e0fa4d1be76edb859a594ce 215 PANTHER PTHR30173:SF31 24 212 8.9E-49 T 22-04-2016 RPIC12D_RS10915 4b4c95220e0fa4d1be76edb859a594ce 215 Pfam PF04542 Sigma-70 region 2 53 120 4.5E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10915 4b4c95220e0fa4d1be76edb859a594ce 215 Gene3D G3DSA:1.10.1740.10 29 132 8.2E-26 T 22-04-2016 RPIC12D_RS10915 4b4c95220e0fa4d1be76edb859a594ce 215 Pfam PF04545 Sigma-70, region 4 161 210 1.9E-14 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS10915 4b4c95220e0fa4d1be76edb859a594ce 215 PANTHER PTHR30173 24 212 8.9E-49 T 22-04-2016 RPIC12D_RS10915 4b4c95220e0fa4d1be76edb859a594ce 215 Gene3D G3DSA:1.10.10.10 153 213 1.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12820 23fa5e728b5d71ef02e4158b852c4649 120 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 117 8.6E-53 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 RPIC12D_RS12820 23fa5e728b5d71ef02e4158b852c4649 120 Gene3D G3DSA:2.40.40.20 1 119 4.3E-54 T 22-04-2016 RPIC12D_RS12820 23fa5e728b5d71ef02e4158b852c4649 120 SUPERFAMILY SSF50692 1 117 1.62E-49 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RPIC12D_RS12820 23fa5e728b5d71ef02e4158b852c4649 120 PANTHER PTHR21012:SF0 2 117 4.8E-64 T 22-04-2016 RPIC12D_RS12820 23fa5e728b5d71ef02e4158b852c4649 120 PIRSF PIRSF006246 1 120 5.8E-53 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 RPIC12D_RS12820 23fa5e728b5d71ef02e4158b852c4649 120 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 93 2.0E-46 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 RPIC12D_RS12820 23fa5e728b5d71ef02e4158b852c4649 120 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 120 72.002 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 RPIC12D_RS12820 23fa5e728b5d71ef02e4158b852c4649 120 Pfam PF02261 Aspartate decarboxylase 1 114 9.8E-51 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 RPIC12D_RS12820 23fa5e728b5d71ef02e4158b852c4649 120 PANTHER PTHR21012 2 117 4.8E-64 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 RPIC12D_RS12155 df49cf0b1ea3e867195da9299a41f7cb 517 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 506 7.0E-142 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC12D_RS12155 df49cf0b1ea3e867195da9299a41f7cb 517 PANTHER PTHR11206:SF90 468 489 1.1E-84 T 22-04-2016 RPIC12D_RS12155 df49cf0b1ea3e867195da9299a41f7cb 517 PRINTS PR01806 Virulence factor MviN signature 264 290 4.7E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC12D_RS12155 df49cf0b1ea3e867195da9299a41f7cb 517 PRINTS PR01806 Virulence factor MviN signature 158 179 4.7E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC12D_RS12155 df49cf0b1ea3e867195da9299a41f7cb 517 PRINTS PR01806 Virulence factor MviN signature 362 381 4.7E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC12D_RS12155 df49cf0b1ea3e867195da9299a41f7cb 517 PRINTS PR01806 Virulence factor MviN signature 414 431 4.7E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC12D_RS12155 df49cf0b1ea3e867195da9299a41f7cb 517 PRINTS PR01806 Virulence factor MviN signature 134 158 4.7E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC12D_RS12155 df49cf0b1ea3e867195da9299a41f7cb 517 PRINTS PR01806 Virulence factor MviN signature 33 52 4.7E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC12D_RS12155 df49cf0b1ea3e867195da9299a41f7cb 517 PRINTS PR01806 Virulence factor MviN signature 52 68 4.7E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC12D_RS12155 df49cf0b1ea3e867195da9299a41f7cb 517 PANTHER PTHR11206 67 85 1.1E-84 T 22-04-2016 RPIC12D_RS12155 df49cf0b1ea3e867195da9299a41f7cb 517 PIRSF PIRSF002869 1 517 5.4E-154 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC12D_RS12155 df49cf0b1ea3e867195da9299a41f7cb 517 PANTHER PTHR11206:SF90 67 85 1.1E-84 T 22-04-2016 RPIC12D_RS12155 df49cf0b1ea3e867195da9299a41f7cb 517 Pfam PF03023 MviN-like protein 28 471 3.0E-136 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC12D_RS12155 df49cf0b1ea3e867195da9299a41f7cb 517 PANTHER PTHR11206 216 447 1.1E-84 T 22-04-2016 RPIC12D_RS12155 df49cf0b1ea3e867195da9299a41f7cb 517 PANTHER PTHR11206 468 489 1.1E-84 T 22-04-2016 RPIC12D_RS12155 df49cf0b1ea3e867195da9299a41f7cb 517 PANTHER PTHR11206:SF90 216 447 1.1E-84 T 22-04-2016 RPIC12D_RS03750 94ddf987772879370974dd689373692e 479 Gene3D G3DSA:3.40.50.1460 34 168 3.7E-11 T 22-04-2016 IPR029030 Caspase-like domain RPIC12D_RS03750 94ddf987772879370974dd689373692e 479 SUPERFAMILY SSF81901 323 392 1.11E-8 T 22-04-2016 RPIC12D_RS03750 94ddf987772879370974dd689373692e 479 Gene3D G3DSA:1.25.40.10 320 414 9.2E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS03750 94ddf987772879370974dd689373692e 479 PANTHER PTHR22576 9 334 3.6E-53 T 22-04-2016 RPIC12D_RS03750 94ddf987772879370974dd689373692e 479 Pfam PF00656 Caspase domain 36 258 1.4E-21 T 22-04-2016 RPIC12D_RS03750 94ddf987772879370974dd689373692e 479 SUPERFAMILY SSF52129 32 265 5.98E-39 T 22-04-2016 IPR029030 Caspase-like domain RPIC12D_RS03750 94ddf987772879370974dd689373692e 479 PANTHER PTHR22576:SF30 9 334 3.6E-53 T 22-04-2016 RPIC12D_RS08675 366a4d686294bfdae8fc4dae5bf17543 221 SUPERFAMILY SSF53335 27 216 1.01E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS08675 366a4d686294bfdae8fc4dae5bf17543 221 PANTHER PTHR10920 1 218 2.7E-87 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RPIC12D_RS08675 366a4d686294bfdae8fc4dae5bf17543 221 PANTHER PTHR10920:SF20 1 218 2.7E-87 T 22-04-2016 RPIC12D_RS08675 366a4d686294bfdae8fc4dae5bf17543 221 Gene3D G3DSA:3.40.50.150 3 219 1.8E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS08675 366a4d686294bfdae8fc4dae5bf17543 221 Pfam PF01728 FtsJ-like methyltransferase 28 216 1.8E-49 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 RPIC12D_RS08675 366a4d686294bfdae8fc4dae5bf17543 221 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 217 30.344 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RPIC12D_RS08675 366a4d686294bfdae8fc4dae5bf17543 221 PIRSF PIRSF005461 1 220 1.5E-66 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RPIC12D_RS12265 16234f7498bd57d1719fd6e0d5435855 361 Pfam PF02805 Metal binding domain of Ada 19 82 2.1E-29 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RPIC12D_RS12265 16234f7498bd57d1719fd6e0d5435855 361 Pfam PF12833 Helix-turn-helix domain 113 190 1.3E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS12265 16234f7498bd57d1719fd6e0d5435855 361 SUPERFAMILY SSF46689 93 139 7.29E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS12265 16234f7498bd57d1719fd6e0d5435855 361 SUPERFAMILY SSF53155 196 275 1.08E-21 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 RPIC12D_RS12265 16234f7498bd57d1719fd6e0d5435855 361 PIRSF PIRSF000409 4 361 2.4E-141 T 22-04-2016 IPR016221 Bifunctional regulatory protein Ada RPIC12D_RS12265 16234f7498bd57d1719fd6e0d5435855 361 Gene3D G3DSA:1.10.10.10 276 357 9.7E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12265 16234f7498bd57d1719fd6e0d5435855 361 PANTHER PTHR10815:SF9 165 356 2.0E-114 T 22-04-2016 RPIC12D_RS12265 16234f7498bd57d1719fd6e0d5435855 361 SUPERFAMILY SSF46767 276 356 2.88E-29 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RPIC12D_RS12265 16234f7498bd57d1719fd6e0d5435855 361 Gene3D G3DSA:3.40.10.10 13 94 4.8E-31 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RPIC12D_RS12265 16234f7498bd57d1719fd6e0d5435855 361 Gene3D G3DSA:1.10.10.60 147 188 3.7E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS12265 16234f7498bd57d1719fd6e0d5435855 361 Gene3D G3DSA:3.30.160.70 189 275 9.2E-35 T 22-04-2016 RPIC12D_RS12265 16234f7498bd57d1719fd6e0d5435855 361 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 278 356 1.1E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RPIC12D_RS12265 16234f7498bd57d1719fd6e0d5435855 361 Gene3D G3DSA:1.10.10.60 95 146 3.4E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS12265 16234f7498bd57d1719fd6e0d5435855 361 SUPERFAMILY SSF57884 11 99 3.4E-30 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RPIC12D_RS12265 16234f7498bd57d1719fd6e0d5435855 361 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 277 356 3.4E-33 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RPIC12D_RS12265 16234f7498bd57d1719fd6e0d5435855 361 PANTHER PTHR10815 165 356 2.0E-114 T 22-04-2016 RPIC12D_RS12265 16234f7498bd57d1719fd6e0d5435855 361 SMART SM00342 107 189 1.5E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS12265 16234f7498bd57d1719fd6e0d5435855 361 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 327 333 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 RPIC12D_RS17110 159f486567d9c4d1e3f8b19357b417ad 214 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 188 1.9E-39 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS17110 159f486567d9c4d1e3f8b19357b417ad 214 SUPERFAMILY SSF53639 4 211 2.16E-53 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS17110 159f486567d9c4d1e3f8b19357b417ad 214 Gene3D G3DSA:3.40.225.10 6 211 2.6E-62 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS17110 159f486567d9c4d1e3f8b19357b417ad 214 SMART SM01007 11 189 1.9E-45 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS17110 159f486567d9c4d1e3f8b19357b417ad 214 PANTHER PTHR22789:SF6 1 211 3.6E-80 T 22-04-2016 RPIC12D_RS17110 159f486567d9c4d1e3f8b19357b417ad 214 PANTHER PTHR22789 1 211 3.6E-80 T 22-04-2016 RPIC12D_RS02835 6115e5473f1f9506fca2848f3fc2628a 172 Gene3D G3DSA:3.40.50.2020 8 151 2.9E-32 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS02835 6115e5473f1f9506fca2848f3fc2628a 172 PANTHER PTHR11608 33 168 9.7E-40 T 22-04-2016 RPIC12D_RS02835 6115e5473f1f9506fca2848f3fc2628a 172 SUPERFAMILY SSF53271 11 144 1.97E-31 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS02835 6115e5473f1f9506fca2848f3fc2628a 172 Pfam PF00156 Phosphoribosyl transferase domain 32 139 2.8E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIC12D_RS05010 bbe1f083613390be1f496d82c0675ccd 191 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 76 4.3E-17 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RPIC12D_RS05010 bbe1f083613390be1f496d82c0675ccd 191 PANTHER PTHR14269 2 186 5.6E-63 T 22-04-2016 RPIC12D_RS05010 bbe1f083613390be1f496d82c0675ccd 191 PANTHER PTHR14269:SF13 2 186 5.6E-63 T 22-04-2016 RPIC12D_RS05010 bbe1f083613390be1f496d82c0675ccd 191 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RPIC12D_RS05010 bbe1f083613390be1f496d82c0675ccd 191 PIRSF PIRSF000847 1 191 1.1E-42 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 RPIC12D_RS05010 bbe1f083613390be1f496d82c0675ccd 191 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 186 3.6E-51 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 RPIC12D_RS16880 43d396dd8b1dff8d65bfcf0bf3743e03 348 PANTHER PTHR34138:SF1 5 348 2.7E-67 T 22-04-2016 RPIC12D_RS16880 43d396dd8b1dff8d65bfcf0bf3743e03 348 PANTHER PTHR34138 5 348 2.7E-67 T 22-04-2016 RPIC12D_RS16880 43d396dd8b1dff8d65bfcf0bf3743e03 348 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 9 276 6.8E-49 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 RPIC12D_RS16880 43d396dd8b1dff8d65bfcf0bf3743e03 348 Pfam PF04085 rod shape-determining protein MreC 127 273 7.1E-37 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 RPIC12D_RS12315 5dff970de017a10b95c486577d8a15ee 272 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 12 271 3.4E-99 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC12D_RS12315 5dff970de017a10b95c486577d8a15ee 272 Gene3D G3DSA:3.20.20.60 10 271 1.8E-113 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS12315 5dff970de017a10b95c486577d8a15ee 272 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 12 271 42.555 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC12D_RS12315 5dff970de017a10b95c486577d8a15ee 272 PANTHER PTHR20881 6 272 5.3E-142 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC12D_RS12315 5dff970de017a10b95c486577d8a15ee 272 Pfam PF02548 Ketopantoate hydroxymethyltransferase 12 266 5.0E-109 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC12D_RS12315 5dff970de017a10b95c486577d8a15ee 272 PIRSF PIRSF000388 3 272 1.3E-99 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC12D_RS12315 5dff970de017a10b95c486577d8a15ee 272 SUPERFAMILY SSF51621 12 271 9.81E-106 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS01235 2bc6e175d3b04bc560695eb0abbaef15 972 SUPERFAMILY SSF55785 665 799 1.21E-15 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS01235 2bc6e175d3b04bc560695eb0abbaef15 972 SUPERFAMILY SSF55073 817 970 4.08E-46 T 22-04-2016 IPR029787 Nucleotide cyclase RPIC12D_RS01235 2bc6e175d3b04bc560695eb0abbaef15 972 Gene3D G3DSA:3.30.450.20 673 799 7.8E-16 T 22-04-2016 RPIC12D_RS01235 2bc6e175d3b04bc560695eb0abbaef15 972 PANTHER PTHR10799:SF774 792 972 4.0E-36 T 22-04-2016 RPIC12D_RS01235 2bc6e175d3b04bc560695eb0abbaef15 972 SMART SM00091 679 745 0.12 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS01235 2bc6e175d3b04bc560695eb0abbaef15 972 SMART SM00091 555 621 6.2E-5 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS01235 2bc6e175d3b04bc560695eb0abbaef15 972 PANTHER PTHR10799 792 972 4.0E-36 T 22-04-2016 RPIC12D_RS01235 2bc6e175d3b04bc560695eb0abbaef15 972 SMART SM00267 801 972 4.9E-55 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS01235 2bc6e175d3b04bc560695eb0abbaef15 972 Gene3D G3DSA:3.30.450.20 554 672 2.5E-17 T 22-04-2016 RPIC12D_RS01235 2bc6e175d3b04bc560695eb0abbaef15 972 Pfam PF00990 Diguanylate cyclase, GGDEF domain 812 970 1.9E-44 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS01235 2bc6e175d3b04bc560695eb0abbaef15 972 SUPERFAMILY SSF55785 543 665 2.51E-18 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS01235 2bc6e175d3b04bc560695eb0abbaef15 972 Gene3D G3DSA:3.30.70.270 814 970 5.8E-53 T 22-04-2016 RPIC12D_RS01235 2bc6e175d3b04bc560695eb0abbaef15 972 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 551 674 4.9E-12 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS01235 2bc6e175d3b04bc560695eb0abbaef15 972 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 808 970 2.8E-43 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS01235 2bc6e175d3b04bc560695eb0abbaef15 972 Pfam PF08448 PAS fold 562 668 6.2E-14 T 22-04-2016 IPR013656 PAS fold-4 RPIC12D_RS01235 2bc6e175d3b04bc560695eb0abbaef15 972 Pfam PF08448 PAS fold 685 803 1.1E-7 T 22-04-2016 IPR013656 PAS fold-4 RPIC12D_RS00110 750b5e8c0a599867424dfd6859fe2372 156 SUPERFAMILY SSF69118 6 146 8.93E-45 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS00110 750b5e8c0a599867424dfd6859fe2372 156 PANTHER PTHR34846 14 129 6.6E-15 T 22-04-2016 RPIC12D_RS00110 750b5e8c0a599867424dfd6859fe2372 156 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 34 80 3.7E-15 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS00110 750b5e8c0a599867424dfd6859fe2372 156 Pfam PF02627 Carboxymuconolactone decarboxylase family 15 95 2.5E-17 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS00110 750b5e8c0a599867424dfd6859fe2372 156 Gene3D G3DSA:1.20.1290.10 5 146 1.2E-50 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS00110 750b5e8c0a599867424dfd6859fe2372 156 PANTHER PTHR34846:SF2 14 129 6.6E-15 T 22-04-2016 RPIC12D_RS01485 7ae7f2cd45d4d1e01e3b6710cebe955b 192 Pfam PF01965 DJ-1/PfpI family 3 184 3.7E-52 T 22-04-2016 IPR002818 DJ-1/PfpI RPIC12D_RS01485 7ae7f2cd45d4d1e01e3b6710cebe955b 192 Gene3D G3DSA:3.40.50.880 1 186 2.5E-58 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS01485 7ae7f2cd45d4d1e01e3b6710cebe955b 192 SUPERFAMILY SSF52317 3 187 2.58E-52 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS01485 7ae7f2cd45d4d1e01e3b6710cebe955b 192 PANTHER PTHR11019:SF112 111 144 1.4E-55 T 22-04-2016 RPIC12D_RS01485 7ae7f2cd45d4d1e01e3b6710cebe955b 192 PANTHER PTHR11019:SF112 3 93 1.4E-55 T 22-04-2016 RPIC12D_RS01485 7ae7f2cd45d4d1e01e3b6710cebe955b 192 PANTHER PTHR11019 111 144 1.4E-55 T 22-04-2016 RPIC12D_RS01485 7ae7f2cd45d4d1e01e3b6710cebe955b 192 PANTHER PTHR11019 3 93 1.4E-55 T 22-04-2016 RPIC12D_RS01485 7ae7f2cd45d4d1e01e3b6710cebe955b 192 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 186 1.4E-56 T 22-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 RPIC12D_RS12255 d7db29614c3c285a31f424252cb4b1b1 156 PANTHER PTHR30009 32 146 1.9E-24 T 22-04-2016 RPIC12D_RS12255 d7db29614c3c285a31f424252cb4b1b1 156 PANTHER PTHR30009:SF7 32 146 1.9E-24 T 22-04-2016 RPIC12D_RS12255 d7db29614c3c285a31f424252cb4b1b1 156 Pfam PF03918 Cytochrome C biogenesis protein 9 146 5.1E-46 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family RPIC12D_RS00485 95c0bbf386011978154821b1dc122c6c 182 PANTHER PTHR23091 1 159 4.3E-15 T 22-04-2016 RPIC12D_RS00485 95c0bbf386011978154821b1dc122c6c 182 PANTHER PTHR23091:SF243 1 159 4.3E-15 T 22-04-2016 RPIC12D_RS00485 95c0bbf386011978154821b1dc122c6c 182 Gene3D G3DSA:3.40.630.30 4 176 4.7E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS00485 95c0bbf386011978154821b1dc122c6c 182 SUPERFAMILY SSF55729 6 175 8.89E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS00485 95c0bbf386011978154821b1dc122c6c 182 Pfam PF00583 Acetyltransferase (GNAT) family 72 149 2.1E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC12D_RS15325 b43e719d67e8105c34ff0f2bd4b2b7dc 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 402 2.0E-29 T 22-04-2016 IPR003004 GspF/PilC family RPIC12D_RS15325 b43e719d67e8105c34ff0f2bd4b2b7dc 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 367 381 2.0E-29 T 22-04-2016 IPR003004 GspF/PilC family RPIC12D_RS15325 b43e719d67e8105c34ff0f2bd4b2b7dc 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 164 192 2.0E-29 T 22-04-2016 IPR003004 GspF/PilC family RPIC12D_RS15325 b43e719d67e8105c34ff0f2bd4b2b7dc 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 65 77 2.0E-29 T 22-04-2016 IPR003004 GspF/PilC family RPIC12D_RS15325 b43e719d67e8105c34ff0f2bd4b2b7dc 403 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 402 4.2E-171 T 22-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 RPIC12D_RS15325 b43e719d67e8105c34ff0f2bd4b2b7dc 403 Pfam PF00482 Type II secretion system (T2SS), protein F 272 394 6.4E-27 T 22-04-2016 IPR018076 Type II secretion system F domain RPIC12D_RS15325 b43e719d67e8105c34ff0f2bd4b2b7dc 403 Pfam PF00482 Type II secretion system (T2SS), protein F 70 192 1.4E-32 T 22-04-2016 IPR018076 Type II secretion system F domain RPIC12D_RS15325 b43e719d67e8105c34ff0f2bd4b2b7dc 403 PANTHER PTHR30012 2 403 4.8E-165 T 22-04-2016 RPIC12D_RS15325 b43e719d67e8105c34ff0f2bd4b2b7dc 403 PANTHER PTHR30012:SF5 2 403 4.8E-165 T 22-04-2016 RPIC12D_RS12545 fbaeddf7503203d5890e6c5cb38e7925 379 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 201 215 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC12D_RS12545 fbaeddf7503203d5890e6c5cb38e7925 379 Pfam PF00437 Type II/IV secretion system protein 122 276 1.5E-38 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC12D_RS12545 fbaeddf7503203d5890e6c5cb38e7925 379 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 11 351 1.1E-138 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 RPIC12D_RS12545 fbaeddf7503203d5890e6c5cb38e7925 379 PANTHER PTHR30486 11 368 1.5E-152 T 22-04-2016 RPIC12D_RS12545 fbaeddf7503203d5890e6c5cb38e7925 379 SUPERFAMILY SSF52540 5 345 5.91E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12545 fbaeddf7503203d5890e6c5cb38e7925 379 Gene3D G3DSA:3.40.50.300 109 352 1.6E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12545 fbaeddf7503203d5890e6c5cb38e7925 379 PANTHER PTHR30486:SF3 11 368 1.5E-152 T 22-04-2016 RPIC12D_RS07195 18a62acff7a7324729be7208b23ddf35 415 PANTHER PTHR13693:SF53 1 411 7.1E-153 T 22-04-2016 RPIC12D_RS07195 18a62acff7a7324729be7208b23ddf35 415 Gene3D G3DSA:3.90.1150.10 288 404 7.3E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS07195 18a62acff7a7324729be7208b23ddf35 415 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 406 49.972 T 22-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 RPIC12D_RS07195 18a62acff7a7324729be7208b23ddf35 415 Gene3D G3DSA:3.40.640.10 64 287 4.4E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS07195 18a62acff7a7324729be7208b23ddf35 415 SUPERFAMILY SSF53383 30 408 3.29E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS07195 18a62acff7a7324729be7208b23ddf35 415 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 21 403 3.0E-142 T 22-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 RPIC12D_RS07195 18a62acff7a7324729be7208b23ddf35 415 PANTHER PTHR13693 1 411 7.1E-153 T 22-04-2016 RPIC12D_RS07195 18a62acff7a7324729be7208b23ddf35 415 Pfam PF00155 Aminotransferase class I and II 45 402 6.9E-55 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC12D_RS26535 8d06f57ca0341baa9186aae9ff7a867e 144 Gene3D G3DSA:3.40.50.720 5 144 2.2E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS26535 8d06f57ca0341baa9186aae9ff7a867e 144 SUPERFAMILY SSF69572 4 144 2.22E-55 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RPIC12D_RS26535 8d06f57ca0341baa9186aae9ff7a867e 144 PANTHER PTHR10953 3 144 9.3E-55 T 22-04-2016 RPIC12D_RS26535 8d06f57ca0341baa9186aae9ff7a867e 144 PANTHER PTHR10953:SF158 3 144 9.3E-55 T 22-04-2016 RPIC12D_RS26535 8d06f57ca0341baa9186aae9ff7a867e 144 Pfam PF00899 ThiF family 13 144 2.5E-42 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RPIC12D_RS04530 50a13bd887161e33aa29fd2ecc4584ba 610 PANTHER PTHR24221:SF203 4 606 0.0 T 22-04-2016 RPIC12D_RS04530 50a13bd887161e33aa29fd2ecc4584ba 610 Gene3D G3DSA:3.40.50.300 362 597 1.2E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04530 50a13bd887161e33aa29fd2ecc4584ba 610 SUPERFAMILY SSF52540 351 602 7.7E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04530 50a13bd887161e33aa29fd2ecc4584ba 610 Gene3D G3DSA:1.20.1560.10 27 341 4.6E-35 T 22-04-2016 RPIC12D_RS04530 50a13bd887161e33aa29fd2ecc4584ba 610 Pfam PF00664 ABC transporter transmembrane region 42 304 1.4E-11 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC12D_RS04530 50a13bd887161e33aa29fd2ecc4584ba 610 SMART SM00382 387 578 3.8E-22 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS04530 50a13bd887161e33aa29fd2ecc4584ba 610 Pfam PF00005 ABC transporter 380 532 2.2E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS04530 50a13bd887161e33aa29fd2ecc4584ba 610 PANTHER PTHR24221 4 606 0.0 T 22-04-2016 RPIC12D_RS04530 50a13bd887161e33aa29fd2ecc4584ba 610 SUPERFAMILY SSF90123 27 348 5.1E-48 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC12D_RS04530 50a13bd887161e33aa29fd2ecc4584ba 610 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS08025 51b03a553ba191195ab193b0abacdce3 633 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 13 633 34.433 T 22-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup RPIC12D_RS08025 51b03a553ba191195ab193b0abacdce3 633 PANTHER PTHR30540 24 563 2.1E-235 T 22-04-2016 RPIC12D_RS08025 51b03a553ba191195ab193b0abacdce3 633 Pfam PF02705 K+ potassium transporter 22 554 4.7E-213 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 RPIC12D_RS08025 51b03a553ba191195ab193b0abacdce3 633 PANTHER PTHR30540:SF7 24 563 2.1E-235 T 22-04-2016 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 SUPERFAMILY SSF64484 347 945 0.0 T 22-04-2016 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 SUPERFAMILY SSF64484 1058 1366 0.0 T 22-04-2016 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 SUPERFAMILY SSF64484 12 229 0.0 T 22-04-2016 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Pfam PF00562 RNA polymerase Rpb2, domain 6 724 1290 3.0E-159 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Pfam PF04565 RNA polymerase Rpb2, domain 3 517 584 3.4E-31 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Gene3D G3DSA:2.40.270.10 799 826 2.9E-87 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Gene3D G3DSA:2.40.270.10 1079 1268 2.9E-87 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Gene3D G3DSA:3.90.1110.10 350 448 3.0E-63 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Gene3D G3DSA:3.90.1110.10 156 233 3.0E-63 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1082 1094 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Gene3D G3DSA:2.40.50.150 834 943 3.5E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Gene3D G3DSA:2.40.50.150 1064 1078 3.5E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Pfam PF10385 RNA polymerase beta subunit external 1 domain 595 662 3.3E-23 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 PANTHER PTHR20856:SF20 1053 1147 0.0 T 22-04-2016 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 PANTHER PTHR20856:SF20 1198 1368 0.0 T 22-04-2016 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 PANTHER PTHR20856:SF20 5 233 0.0 T 22-04-2016 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 PANTHER PTHR20856:SF20 749 936 0.0 T 22-04-2016 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 PANTHER PTHR20856:SF20 344 731 0.0 T 22-04-2016 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Pfam PF04560 RNA polymerase Rpb2, domain 7 1292 1366 1.6E-26 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1364 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Gene3D G3DSA:3.90.1100.10 449 595 8.9E-145 T 22-04-2016 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Gene3D G3DSA:3.90.1100.10 21 154 8.9E-145 T 22-04-2016 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Gene3D G3DSA:3.90.1100.10 665 719 8.9E-145 T 22-04-2016 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Gene3D G3DSA:2.40.50.100 721 798 5.4E-29 T 22-04-2016 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 PANTHER PTHR20856 1053 1147 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 PANTHER PTHR20856 1198 1368 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 PANTHER PTHR20856 5 233 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 PANTHER PTHR20856 749 936 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 PANTHER PTHR20856 344 731 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Gene3D G3DSA:2.30.150.10 596 662 3.8E-25 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1368 12.255 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Pfam PF04561 RNA polymerase Rpb2, domain 2 351 458 1.9E-15 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Pfam PF04561 RNA polymerase Rpb2, domain 2 154 226 9.4E-6 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS14845 7af544bc75539de6505e67606c9436a7 1368 Pfam PF04563 RNA polymerase beta subunit 27 504 2.3E-35 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC12D_RS08585 82ba84a37ceeba67310e81987bb2fd59 286 PANTHER PTHR11935 5 272 4.1E-112 T 22-04-2016 RPIC12D_RS08585 82ba84a37ceeba67310e81987bb2fd59 286 SUPERFAMILY SSF56281 6 251 7.34E-50 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS08585 82ba84a37ceeba67310e81987bb2fd59 286 Pfam PF00753 Metallo-beta-lactamase superfamily 11 204 1.6E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS08585 82ba84a37ceeba67310e81987bb2fd59 286 SMART SM00849 13 204 4.7E-24 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS08585 82ba84a37ceeba67310e81987bb2fd59 286 Gene3D G3DSA:3.60.15.10 4 247 7.6E-49 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS08585 82ba84a37ceeba67310e81987bb2fd59 286 PANTHER PTHR11935:SF110 5 272 4.1E-112 T 22-04-2016 RPIC12D_RS10460 857d15b722b564d2fe754839ad36a9ce 328 SUPERFAMILY SSF48452 233 307 4.61E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS10460 857d15b722b564d2fe754839ad36a9ce 328 Gene3D G3DSA:1.25.40.10 235 311 2.0E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS08240 1747c8573518173daf12fb4d24608714 307 Gene3D G3DSA:1.10.10.60 200 253 1.8E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS08240 1747c8573518173daf12fb4d24608714 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 284 5.4E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RPIC12D_RS08240 1747c8573518173daf12fb4d24608714 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 284 300 5.4E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RPIC12D_RS08240 1747c8573518173daf12fb4d24608714 307 PANTHER PTHR11019:SF77 39 307 9.5E-50 T 22-04-2016 RPIC12D_RS08240 1747c8573518173daf12fb4d24608714 307 SMART SM00342 217 300 1.4E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS08240 1747c8573518173daf12fb4d24608714 307 Gene3D G3DSA:1.10.10.60 254 302 2.1E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS08240 1747c8573518173daf12fb4d24608714 307 SUPERFAMILY SSF46689 253 303 1.61E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS08240 1747c8573518173daf12fb4d24608714 307 Gene3D G3DSA:2.60.120.280 38 185 3.1E-10 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RPIC12D_RS08240 1747c8573518173daf12fb4d24608714 307 PANTHER PTHR11019 39 307 9.5E-50 T 22-04-2016 RPIC12D_RS08240 1747c8573518173daf12fb4d24608714 307 SUPERFAMILY SSF51215 6 77 2.48E-12 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RPIC12D_RS08240 1747c8573518173daf12fb4d24608714 307 Pfam PF12852 Cupin 2 184 5.7E-32 T 22-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain RPIC12D_RS08240 1747c8573518173daf12fb4d24608714 307 Pfam PF12833 Helix-turn-helix domain 223 301 9.8E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS08240 1747c8573518173daf12fb4d24608714 307 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 254 296 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS08240 1747c8573518173daf12fb4d24608714 307 SUPERFAMILY SSF46689 201 251 8.08E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS09675 144e1717e7ff78e61ef414ec71b36687 315 Pfam PF03466 LysR substrate binding domain 96 301 3.4E-22 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS09675 144e1717e7ff78e61ef414ec71b36687 315 SUPERFAMILY SSF46785 6 85 1.77E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS09675 144e1717e7ff78e61ef414ec71b36687 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 3.3E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS09675 144e1717e7ff78e61ef414ec71b36687 315 PANTHER PTHR30118 1 310 2.4E-75 T 22-04-2016 RPIC12D_RS09675 144e1717e7ff78e61ef414ec71b36687 315 PANTHER PTHR30118:SF8 1 310 2.4E-75 T 22-04-2016 RPIC12D_RS09675 144e1717e7ff78e61ef414ec71b36687 315 Gene3D G3DSA:1.10.10.10 5 87 1.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS09675 144e1717e7ff78e61ef414ec71b36687 315 Gene3D G3DSA:3.40.190.10 175 272 6.9E-26 T 22-04-2016 RPIC12D_RS09675 144e1717e7ff78e61ef414ec71b36687 315 Gene3D G3DSA:3.40.190.10 276 308 1.4E-31 T 22-04-2016 RPIC12D_RS09675 144e1717e7ff78e61ef414ec71b36687 315 Gene3D G3DSA:3.40.190.10 91 174 1.4E-31 T 22-04-2016 RPIC12D_RS09675 144e1717e7ff78e61ef414ec71b36687 315 SUPERFAMILY SSF53850 91 300 8.32E-41 T 22-04-2016 RPIC12D_RS09380 ee3b11e64d9d2628bed639331325820a 205 PIRSF PIRSF016919 8 204 5.1E-51 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein RPIC12D_RS09380 ee3b11e64d9d2628bed639331325820a 205 Pfam PF04955 HupE / UreJ protein 16 200 5.5E-57 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein RPIC12D_RS01860 52ca8f7516f03bfc98dfa5fc25fef920 227 Gene3D G3DSA:1.10.3720.10 13 225 4.2E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS01860 52ca8f7516f03bfc98dfa5fc25fef920 227 PANTHER PTHR30614:SF1 1 225 2.9E-109 T 22-04-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 RPIC12D_RS01860 52ca8f7516f03bfc98dfa5fc25fef920 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 120 7.2E-22 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS01860 52ca8f7516f03bfc98dfa5fc25fef920 227 PANTHER PTHR30614 1 225 2.9E-109 T 22-04-2016 RPIC12D_RS01860 52ca8f7516f03bfc98dfa5fc25fef920 227 SUPERFAMILY SSF161098 18 217 1.24E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS01860 52ca8f7516f03bfc98dfa5fc25fef920 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 226 4.8E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS02655 d34ea1522d41fc736bc5d122afa35b66 477 Gene3D G3DSA:3.30.70.270 312 473 1.5E-50 T 22-04-2016 RPIC12D_RS02655 d34ea1522d41fc736bc5d122afa35b66 477 Gene3D G3DSA:3.30.450.20 158 272 3.4E-11 T 22-04-2016 RPIC12D_RS02655 d34ea1522d41fc736bc5d122afa35b66 477 Pfam PF00990 Diguanylate cyclase, GGDEF domain 311 470 1.1E-46 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS02655 d34ea1522d41fc736bc5d122afa35b66 477 PANTHER PTHR10799:SF750 220 473 1.4E-28 T 22-04-2016 RPIC12D_RS02655 d34ea1522d41fc736bc5d122afa35b66 477 PANTHER PTHR10799 220 473 1.4E-28 T 22-04-2016 RPIC12D_RS02655 d34ea1522d41fc736bc5d122afa35b66 477 Gene3D G3DSA:3.30.450.20 69 157 5.3E-8 T 22-04-2016 RPIC12D_RS02655 d34ea1522d41fc736bc5d122afa35b66 477 SUPERFAMILY SSF55073 315 472 1.14E-43 T 22-04-2016 IPR029787 Nucleotide cyclase RPIC12D_RS02655 d34ea1522d41fc736bc5d122afa35b66 477 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 307 474 1.1E-47 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS02655 d34ea1522d41fc736bc5d122afa35b66 477 Pfam PF02743 Cache domain 23 256 4.6E-16 T 22-04-2016 IPR033479 Double Cache domain 1 RPIC12D_RS02655 d34ea1522d41fc736bc5d122afa35b66 477 SMART SM00267 299 474 3.4E-57 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS05545 996b1cde3bd9ed23f4ad0e4631d8def2 472 Pfam PF11734 TilS substrate C-terminal domain 395 464 1.9E-22 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RPIC12D_RS05545 996b1cde3bd9ed23f4ad0e4631d8def2 472 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 41 219 1.4E-48 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RPIC12D_RS05545 996b1cde3bd9ed23f4ad0e4631d8def2 472 SUPERFAMILY SSF52402 41 252 3.7E-53 T 22-04-2016 RPIC12D_RS05545 996b1cde3bd9ed23f4ad0e4631d8def2 472 Pfam PF01171 PP-loop family 41 219 7.6E-53 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RPIC12D_RS05545 996b1cde3bd9ed23f4ad0e4631d8def2 472 SUPERFAMILY SSF82829 253 336 2.22E-19 T 22-04-2016 RPIC12D_RS05545 996b1cde3bd9ed23f4ad0e4631d8def2 472 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 17 326 21.88 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RPIC12D_RS05545 996b1cde3bd9ed23f4ad0e4631d8def2 472 PANTHER PTHR11807 41 446 3.5E-69 T 22-04-2016 RPIC12D_RS05545 996b1cde3bd9ed23f4ad0e4631d8def2 472 SUPERFAMILY SSF56037 356 467 1.88E-23 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RPIC12D_RS05545 996b1cde3bd9ed23f4ad0e4631d8def2 472 SMART SM00977 393 464 1.9E-22 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RPIC12D_RS05545 996b1cde3bd9ed23f4ad0e4631d8def2 472 Gene3D G3DSA:3.40.50.620 40 199 1.0E-14 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS05545 996b1cde3bd9ed23f4ad0e4631d8def2 472 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 393 438 2.8E-15 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RPIC12D_RS05545 996b1cde3bd9ed23f4ad0e4631d8def2 472 Pfam PF09179 TilS substrate binding domain 267 331 1.5E-17 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RPIC12D_RS05545 996b1cde3bd9ed23f4ad0e4631d8def2 472 PANTHER PTHR11807:SF2 41 446 3.5E-69 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RPIC12D_RS03120 62342c292b249f2073a6cc726bca2e95 110 Gene3D G3DSA:1.10.10.60 11 96 1.0E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS03120 62342c292b249f2073a6cc726bca2e95 110 SUPERFAMILY SSF46689 7 100 2.33E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS03120 62342c292b249f2073a6cc726bca2e95 110 PANTHER PTHR33215 4 106 1.6E-19 T 22-04-2016 RPIC12D_RS03120 62342c292b249f2073a6cc726bca2e95 110 Pfam PF01527 Transposase 7 81 9.4E-12 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS04040 d1878b625406b19dddd71ea68784630a 500 PANTHER PTHR35342 2 500 1.2E-295 T 22-04-2016 RPIC12D_RS04040 d1878b625406b19dddd71ea68784630a 500 PANTHER PTHR35342:SF2 2 500 1.2E-295 T 22-04-2016 RPIC12D_RS04040 d1878b625406b19dddd71ea68784630a 500 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 438 5.3E-154 T 22-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane RPIC12D_RS16610 7ca679341cca0c9db5f1e49e6b10f310 302 Gene3D G3DSA:3.40.190.10 40 126 2.2E-27 T 22-04-2016 RPIC12D_RS16610 7ca679341cca0c9db5f1e49e6b10f310 302 Gene3D G3DSA:3.40.190.10 234 275 2.2E-27 T 22-04-2016 RPIC12D_RS16610 7ca679341cca0c9db5f1e49e6b10f310 302 SMART SM00062 43 273 3.4E-50 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS16610 7ca679341cca0c9db5f1e49e6b10f310 302 PANTHER PTHR30085:SF2 2 300 8.2E-93 T 22-04-2016 RPIC12D_RS16610 7ca679341cca0c9db5f1e49e6b10f310 302 PANTHER PTHR30085 2 300 8.2E-93 T 22-04-2016 RPIC12D_RS16610 7ca679341cca0c9db5f1e49e6b10f310 302 SUPERFAMILY SSF53850 8 274 5.14E-57 T 22-04-2016 RPIC12D_RS16610 7ca679341cca0c9db5f1e49e6b10f310 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 271 2.1E-47 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS16610 7ca679341cca0c9db5f1e49e6b10f310 302 Gene3D G3DSA:3.40.190.10 127 233 4.5E-23 T 22-04-2016 RPIC12D_RS01200 1de6bd4a3aa7b6d233b87b30fd1396c1 69 Pfam PF11137 Protein of unknown function (DUF2909) 1 60 4.8E-24 T 22-04-2016 IPR021313 Protein of unknown function DUF2909 RPIC12D_RS03360 1a917995c05c36265d0010cf96ed8a2e 249 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 15 249 1.6E-99 T 22-04-2016 IPR022266 Integrating conjugative element protein, PFL4697-type RPIC12D_RS03360 1a917995c05c36265d0010cf96ed8a2e 249 Pfam PF14348 Domain of unknown function (DUF4400) 51 246 6.7E-72 T 22-04-2016 IPR022266 Integrating conjugative element protein, PFL4697-type RPIC12D_RS10610 d8e3ff44bf956b50832264fbb01f5570 309 PANTHER PTHR11935 56 230 4.1E-14 T 22-04-2016 RPIC12D_RS10610 d8e3ff44bf956b50832264fbb01f5570 309 SUPERFAMILY SSF56281 13 283 3.38E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS10610 d8e3ff44bf956b50832264fbb01f5570 309 Pfam PF00753 Metallo-beta-lactamase superfamily 49 230 7.1E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS10610 d8e3ff44bf956b50832264fbb01f5570 309 SMART SM00849 45 234 2.9E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS10610 d8e3ff44bf956b50832264fbb01f5570 309 Gene3D G3DSA:3.60.15.10 15 254 1.2E-34 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS11875 496b7940a934b12367a47c879224db7b 310 Pfam PF00892 EamA-like transporter family 151 281 9.3E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS11875 496b7940a934b12367a47c879224db7b 310 Pfam PF00892 EamA-like transporter family 9 136 8.2E-20 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS11875 496b7940a934b12367a47c879224db7b 310 SUPERFAMILY SSF103481 38 139 6.02E-16 T 22-04-2016 RPIC12D_RS11875 496b7940a934b12367a47c879224db7b 310 PANTHER PTHR12715 5 291 3.3E-84 T 22-04-2016 RPIC12D_RS11875 496b7940a934b12367a47c879224db7b 310 SUPERFAMILY SSF103481 186 280 9.42E-18 T 22-04-2016 RPIC12D_RS11875 496b7940a934b12367a47c879224db7b 310 PANTHER PTHR12715:SF17 5 291 3.3E-84 T 22-04-2016 RPIC12D_RS11590 35024c173dda9467c1bd321ea3f0409f 342 Pfam PF04321 RmlD substrate binding domain 153 300 1.0E-4 T 22-04-2016 IPR029903 RmlD-like substrate binding domain RPIC12D_RS11590 35024c173dda9467c1bd321ea3f0409f 342 PANTHER PTHR10366 150 342 4.3E-29 T 22-04-2016 RPIC12D_RS11590 35024c173dda9467c1bd321ea3f0409f 342 PANTHER PTHR10366 29 120 4.3E-29 T 22-04-2016 RPIC12D_RS11590 35024c173dda9467c1bd321ea3f0409f 342 PANTHER PTHR10366:SF430 150 342 4.3E-29 T 22-04-2016 RPIC12D_RS11590 35024c173dda9467c1bd321ea3f0409f 342 PANTHER PTHR10366:SF430 29 120 4.3E-29 T 22-04-2016 RPIC12D_RS11590 35024c173dda9467c1bd321ea3f0409f 342 Gene3D G3DSA:3.40.50.720 148 283 1.1E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS11590 35024c173dda9467c1bd321ea3f0409f 342 SUPERFAMILY SSF51735 29 332 1.42E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS11590 35024c173dda9467c1bd321ea3f0409f 342 Gene3D G3DSA:3.40.50.720 28 99 9.9E-7 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS10000 dc77bea90c564316245b508094a3e639 263 PANTHER PTHR24319:SF23 1 258 4.9E-62 T 22-04-2016 RPIC12D_RS10000 dc77bea90c564316245b508094a3e639 263 SUPERFAMILY SSF51735 1 258 5.48E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS10000 dc77bea90c564316245b508094a3e639 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 4.9E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10000 dc77bea90c564316245b508094a3e639 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.9E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10000 dc77bea90c564316245b508094a3e639 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 4.9E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10000 dc77bea90c564316245b508094a3e639 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 2.0E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10000 dc77bea90c564316245b508094a3e639 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.0E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10000 dc77bea90c564316245b508094a3e639 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.0E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10000 dc77bea90c564316245b508094a3e639 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 2.0E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10000 dc77bea90c564316245b508094a3e639 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.0E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10000 dc77bea90c564316245b508094a3e639 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.0E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10000 dc77bea90c564316245b508094a3e639 263 Pfam PF00106 short chain dehydrogenase 8 198 2.7E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS10000 dc77bea90c564316245b508094a3e639 263 PANTHER PTHR24319 1 258 4.9E-62 T 22-04-2016 RPIC12D_RS10000 dc77bea90c564316245b508094a3e639 263 Gene3D G3DSA:3.40.50.720 3 257 2.6E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS11210 d00f6ba79d1dd089a51586174a00bac4 257 PANTHER PTHR30269:SF2 1 256 5.6E-55 T 22-04-2016 RPIC12D_RS11210 d00f6ba79d1dd089a51586174a00bac4 257 Pfam PF01925 Sulfite exporter TauE/SafE 7 255 3.6E-44 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIC12D_RS11210 d00f6ba79d1dd089a51586174a00bac4 257 PANTHER PTHR30269 1 256 5.6E-55 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIC12D_RS04420 32a4dfd5188716dda8b175264dfd8626 208 PIRSF PIRSF016183 16 193 6.9E-67 T 22-04-2016 IPR006839 Ribosome-associated, YjgA RPIC12D_RS04420 32a4dfd5188716dda8b175264dfd8626 208 Gene3D G3DSA:1.10.60.30 121 191 8.0E-31 T 22-04-2016 IPR023153 PSPTO4464-like domain RPIC12D_RS04420 32a4dfd5188716dda8b175264dfd8626 208 Pfam PF04751 Protein of unknown function (DUF615) 32 185 5.9E-55 T 22-04-2016 IPR006839 Ribosome-associated, YjgA RPIC12D_RS04420 32a4dfd5188716dda8b175264dfd8626 208 Gene3D G3DSA:1.10.60.30 43 111 4.9E-28 T 22-04-2016 IPR023153 PSPTO4464-like domain RPIC12D_RS04420 32a4dfd5188716dda8b175264dfd8626 208 PANTHER PTHR38101:SF1 9 206 4.8E-55 T 22-04-2016 RPIC12D_RS04420 32a4dfd5188716dda8b175264dfd8626 208 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 22 189 22.671 T 22-04-2016 IPR006839 Ribosome-associated, YjgA RPIC12D_RS04420 32a4dfd5188716dda8b175264dfd8626 208 SUPERFAMILY SSF158710 43 187 2.09E-48 T 22-04-2016 RPIC12D_RS04420 32a4dfd5188716dda8b175264dfd8626 208 PANTHER PTHR38101 9 206 4.8E-55 T 22-04-2016 RPIC12D_RS09415 48ef16ed6f6196a7ffd5678e9c2b280f 418 Gene3D G3DSA:3.40.50.2300 147 346 4.7E-75 T 22-04-2016 RPIC12D_RS09415 48ef16ed6f6196a7ffd5678e9c2b280f 418 PANTHER PTHR30483 3 418 4.0E-215 T 22-04-2016 RPIC12D_RS09415 48ef16ed6f6196a7ffd5678e9c2b280f 418 Pfam PF13433 Periplasmic binding protein domain 32 407 1.9E-172 T 22-04-2016 RPIC12D_RS09415 48ef16ed6f6196a7ffd5678e9c2b280f 418 SUPERFAMILY SSF53822 31 408 5.78E-92 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS09415 48ef16ed6f6196a7ffd5678e9c2b280f 418 PANTHER PTHR30483:SF8 3 418 4.0E-215 T 22-04-2016 RPIC12D_RS09415 48ef16ed6f6196a7ffd5678e9c2b280f 418 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 32 404 9.7E-181 T 22-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA RPIC12D_RS10585 6eb48c3d2c2981146800c9e36f22f9c4 357 Gene3D G3DSA:2.130.10.10 29 347 1.9E-65 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RPIC12D_RS10585 6eb48c3d2c2981146800c9e36f22f9c4 357 Pfam PF02239 Cytochrome D1 heme domain 148 297 2.5E-9 T 22-04-2016 RPIC12D_RS10585 6eb48c3d2c2981146800c9e36f22f9c4 357 SUPERFAMILY SSF50974 6 357 3.4E-76 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal RPIC12D_RS10585 6eb48c3d2c2981146800c9e36f22f9c4 357 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 69 102 5.3E-10 T 22-04-2016 IPR011964 YVTN beta-propeller repeat RPIC12D_RS10585 6eb48c3d2c2981146800c9e36f22f9c4 357 PANTHER PTHR13833 31 139 4.8E-23 T 22-04-2016 RPIC12D_RS10585 6eb48c3d2c2981146800c9e36f22f9c4 357 PANTHER PTHR13833 164 344 4.8E-23 T 22-04-2016 RPIC12D_RS01735 f9e94f87defd21e22b7c4432f2f2ef2a 339 PANTHER PTHR41542:SF1 4 177 5.8E-28 T 22-04-2016 RPIC12D_RS01735 f9e94f87defd21e22b7c4432f2f2ef2a 339 PANTHER PTHR41542:SF1 206 338 5.8E-28 T 22-04-2016 RPIC12D_RS01735 f9e94f87defd21e22b7c4432f2f2ef2a 339 SUPERFAMILY SSF54427 203 338 1.45E-10 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS01735 f9e94f87defd21e22b7c4432f2f2ef2a 339 Pfam PF04280 Tim44-like domain 207 337 9.1E-18 T 22-04-2016 IPR007379 Tim44-like domain RPIC12D_RS01735 f9e94f87defd21e22b7c4432f2f2ef2a 339 PANTHER PTHR41542 4 177 5.8E-28 T 22-04-2016 RPIC12D_RS01735 f9e94f87defd21e22b7c4432f2f2ef2a 339 PANTHER PTHR41542 206 338 5.8E-28 T 22-04-2016 RPIC12D_RS01735 f9e94f87defd21e22b7c4432f2f2ef2a 339 SMART SM00978 206 337 1.1E-48 T 22-04-2016 IPR007379 Tim44-like domain RPIC12D_RS06900 4de134862cfa57ab9dfc4467cd20fcae 67 SMART SM00357 3 67 3.1E-26 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 RPIC12D_RS06900 4de134862cfa57ab9dfc4467cd20fcae 67 PANTHER PTHR11544 1 67 3.8E-28 T 22-04-2016 RPIC12D_RS06900 4de134862cfa57ab9dfc4467cd20fcae 67 SUPERFAMILY SSF50249 1 65 3.0E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS06900 4de134862cfa57ab9dfc4467cd20fcae 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site RPIC12D_RS06900 4de134862cfa57ab9dfc4467cd20fcae 67 PIRSF PIRSF002599 1 67 1.8E-21 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 RPIC12D_RS06900 4de134862cfa57ab9dfc4467cd20fcae 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.4E-27 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIC12D_RS06900 4de134862cfa57ab9dfc4467cd20fcae 67 PRINTS PR00050 Cold shock protein signature 4 19 1.0E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIC12D_RS06900 4de134862cfa57ab9dfc4467cd20fcae 67 PRINTS PR00050 Cold shock protein signature 40 58 1.0E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIC12D_RS06900 4de134862cfa57ab9dfc4467cd20fcae 67 PRINTS PR00050 Cold shock protein signature 25 34 1.0E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIC12D_RS06900 4de134862cfa57ab9dfc4467cd20fcae 67 Gene3D G3DSA:2.40.50.140 1 65 1.1E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS05360 3b7391598a63bcc19556f64d012a5b9a 111 PANTHER PTHR37485 2 106 7.4E-36 T 22-04-2016 RPIC12D_RS05360 3b7391598a63bcc19556f64d012a5b9a 111 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.105 T 22-04-2016 IPR023081 Cell division protein FtsB RPIC12D_RS05360 3b7391598a63bcc19556f64d012a5b9a 111 Pfam PF04977 Septum formation initiator 11 89 2.5E-27 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 RPIC12D_RS05360 3b7391598a63bcc19556f64d012a5b9a 111 PANTHER PTHR37485:SF1 2 106 7.4E-36 T 22-04-2016 RPIC12D_RS27070 6151e7d9b1bfac33925fc5aa1e127e93 174 PANTHER PTHR30537:SF15 1 168 4.4E-33 T 22-04-2016 RPIC12D_RS27070 6151e7d9b1bfac33925fc5aa1e127e93 174 Gene3D G3DSA:3.40.190.10 52 133 2.0E-29 T 22-04-2016 RPIC12D_RS27070 6151e7d9b1bfac33925fc5aa1e127e93 174 SUPERFAMILY SSF53850 14 168 1.99E-19 T 22-04-2016 RPIC12D_RS27070 6151e7d9b1bfac33925fc5aa1e127e93 174 Pfam PF03466 LysR substrate binding domain 15 164 5.2E-18 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS27070 6151e7d9b1bfac33925fc5aa1e127e93 174 PANTHER PTHR30537 1 168 4.4E-33 T 22-04-2016 RPIC12D_RS27070 6151e7d9b1bfac33925fc5aa1e127e93 174 Gene3D G3DSA:3.40.190.10 3 51 2.1E-8 T 22-04-2016 RPIC12D_RS11615 fcc0d9a38235db0e9e8626fccf169a53 258 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 232 254 3.4E-11 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RPIC12D_RS11615 fcc0d9a38235db0e9e8626fccf169a53 258 Pfam PF00005 ABC transporter 23 183 4.9E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS11615 fcc0d9a38235db0e9e8626fccf169a53 258 SUPERFAMILY SSF52540 6 254 2.46E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11615 fcc0d9a38235db0e9e8626fccf169a53 258 PANTHER PTHR24220:SF358 130 257 1.4E-111 T 22-04-2016 RPIC12D_RS11615 fcc0d9a38235db0e9e8626fccf169a53 258 PANTHER PTHR24220:SF358 9 114 1.4E-111 T 22-04-2016 RPIC12D_RS11615 fcc0d9a38235db0e9e8626fccf169a53 258 SMART SM00382 32 238 5.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS11615 fcc0d9a38235db0e9e8626fccf169a53 258 PANTHER PTHR24220 130 257 1.4E-111 T 22-04-2016 RPIC12D_RS11615 fcc0d9a38235db0e9e8626fccf169a53 258 PANTHER PTHR24220 9 114 1.4E-111 T 22-04-2016 RPIC12D_RS11615 fcc0d9a38235db0e9e8626fccf169a53 258 Gene3D G3DSA:3.40.50.300 3 254 4.4E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07670 e2338880fe9d5fb2e42caf8321afdac0 539 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 515 38.846 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC12D_RS07670 e2338880fe9d5fb2e42caf8321afdac0 539 PANTHER PTHR11469 1 536 1.9E-259 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC12D_RS07670 e2338880fe9d5fb2e42caf8321afdac0 539 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 488 505 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC12D_RS07670 e2338880fe9d5fb2e42caf8321afdac0 539 Gene3D G3DSA:1.10.1390.10 498 536 2.0E-18 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC12D_RS07670 e2338880fe9d5fb2e42caf8321afdac0 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 488 501 2.4E-49 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC12D_RS07670 e2338880fe9d5fb2e42caf8321afdac0 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 2.4E-49 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC12D_RS07670 e2338880fe9d5fb2e42caf8321afdac0 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 2.4E-49 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC12D_RS07670 e2338880fe9d5fb2e42caf8321afdac0 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 474 488 2.4E-49 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC12D_RS07670 e2338880fe9d5fb2e42caf8321afdac0 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 2.4E-49 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC12D_RS07670 e2338880fe9d5fb2e42caf8321afdac0 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 456 474 2.4E-49 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC12D_RS07670 e2338880fe9d5fb2e42caf8321afdac0 539 Gene3D G3DSA:3.40.50.10490 5 95 7.3E-117 T 22-04-2016 RPIC12D_RS07670 e2338880fe9d5fb2e42caf8321afdac0 539 Gene3D G3DSA:3.40.50.10490 291 497 7.3E-117 T 22-04-2016 RPIC12D_RS07670 e2338880fe9d5fb2e42caf8321afdac0 539 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC12D_RS07670 e2338880fe9d5fb2e42caf8321afdac0 539 Pfam PF00342 Phosphoglucose isomerase 49 532 6.1E-200 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC12D_RS07670 e2338880fe9d5fb2e42caf8321afdac0 539 PANTHER PTHR11469:SF4 1 536 1.9E-259 T 22-04-2016 RPIC12D_RS07670 e2338880fe9d5fb2e42caf8321afdac0 539 SUPERFAMILY SSF53697 3 535 5.0E-195 T 22-04-2016 RPIC12D_RS07670 e2338880fe9d5fb2e42caf8321afdac0 539 Gene3D G3DSA:3.40.50.10490 96 289 1.1E-79 T 22-04-2016 RPIC12D_RS06425 089a080eba4052f6e8139040ab1ea1f2 272 PANTHER PTHR30151 22 269 1.4E-149 T 22-04-2016 RPIC12D_RS06425 089a080eba4052f6e8139040ab1ea1f2 272 PANTHER PTHR30151:SF22 22 269 1.4E-149 T 22-04-2016 RPIC12D_RS06425 089a080eba4052f6e8139040ab1ea1f2 272 Gene3D G3DSA:1.10.3720.10 65 261 1.1E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS06425 089a080eba4052f6e8139040ab1ea1f2 272 SUPERFAMILY SSF161098 68 254 1.96E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS06425 089a080eba4052f6e8139040ab1ea1f2 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 259 6.7E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS06290 615cd99cede911342fabe12445473eaa 575 PANTHER PTHR30473:SF2 113 289 5.1E-179 T 22-04-2016 RPIC12D_RS06290 615cd99cede911342fabe12445473eaa 575 PANTHER PTHR30473:SF2 310 575 5.1E-179 T 22-04-2016 RPIC12D_RS06290 615cd99cede911342fabe12445473eaa 575 Gene3D G3DSA:3.40.50.300 359 574 6.6E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06290 615cd99cede911342fabe12445473eaa 575 SUPERFAMILY SSF88723 114 175 6.47E-11 T 22-04-2016 IPR029060 PIN domain-like RPIC12D_RS06290 615cd99cede911342fabe12445473eaa 575 SUPERFAMILY SSF88723 212 265 6.47E-11 T 22-04-2016 IPR029060 PIN domain-like RPIC12D_RS06290 615cd99cede911342fabe12445473eaa 575 SMART SM00670 114 249 3.2E-11 T 22-04-2016 IPR002716 PIN domain RPIC12D_RS06290 615cd99cede911342fabe12445473eaa 575 Pfam PF13638 PIN domain 116 261 1.2E-39 T 22-04-2016 IPR002716 PIN domain RPIC12D_RS06290 615cd99cede911342fabe12445473eaa 575 PANTHER PTHR30473 113 289 5.1E-179 T 22-04-2016 RPIC12D_RS06290 615cd99cede911342fabe12445473eaa 575 PANTHER PTHR30473 310 575 5.1E-179 T 22-04-2016 RPIC12D_RS06290 615cd99cede911342fabe12445473eaa 575 Pfam PF02562 PhoH-like protein 362 569 3.3E-54 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 RPIC12D_RS06290 615cd99cede911342fabe12445473eaa 575 SUPERFAMILY SSF52540 361 447 8.32E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06290 615cd99cede911342fabe12445473eaa 575 SUPERFAMILY SSF52540 260 293 8.32E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06290 615cd99cede911342fabe12445473eaa 575 SUPERFAMILY SSF52540 480 555 8.32E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06290 615cd99cede911342fabe12445473eaa 575 Gene3D G3DSA:3.40.50.1010 114 174 2.4E-9 T 22-04-2016 IPR029060 PIN domain-like RPIC12D_RS06290 615cd99cede911342fabe12445473eaa 575 Gene3D G3DSA:3.40.50.1010 212 268 2.4E-9 T 22-04-2016 IPR029060 PIN domain-like RPIC12D_RS14580 a0ebb76f0399c95416ed16d121c4680d 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 168 3.1E-14 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS14580 a0ebb76f0399c95416ed16d121c4680d 193 SUPERFAMILY SSF88659 110 169 1.64E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS14580 a0ebb76f0399c95416ed16d121c4680d 193 SUPERFAMILY SSF88946 7 48 1.29E-7 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS14580 a0ebb76f0399c95416ed16d121c4680d 193 PANTHER PTHR30173:SF6 59 170 1.1E-28 T 22-04-2016 RPIC12D_RS14580 a0ebb76f0399c95416ed16d121c4680d 193 PANTHER PTHR30173:SF6 10 43 1.1E-28 T 22-04-2016 RPIC12D_RS14580 a0ebb76f0399c95416ed16d121c4680d 193 Gene3D G3DSA:1.10.1740.10 9 92 5.8E-21 T 22-04-2016 RPIC12D_RS14580 a0ebb76f0399c95416ed16d121c4680d 193 Pfam PF04542 Sigma-70 region 2 12 48 5.1E-6 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS14580 a0ebb76f0399c95416ed16d121c4680d 193 Gene3D G3DSA:1.10.10.10 107 170 2.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS14580 a0ebb76f0399c95416ed16d121c4680d 193 PANTHER PTHR30173 59 170 1.1E-28 T 22-04-2016 RPIC12D_RS14580 a0ebb76f0399c95416ed16d121c4680d 193 PANTHER PTHR30173 10 43 1.1E-28 T 22-04-2016 RPIC12D_RS14580 a0ebb76f0399c95416ed16d121c4680d 193 Pfam PF08281 Sigma-70, region 4 111 164 1.6E-17 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS02830 244998c6d7ebbc2aea2e9120af9930ec 143 Pfam PF03652 Holliday junction resolvase 17 141 2.1E-34 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RPIC12D_RS02830 244998c6d7ebbc2aea2e9120af9930ec 143 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 16 143 21.883 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RPIC12D_RS02830 244998c6d7ebbc2aea2e9120af9930ec 143 SMART SM00732 16 116 1.3E-28 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RPIC12D_RS02830 244998c6d7ebbc2aea2e9120af9930ec 143 Gene3D G3DSA:3.30.420.140 16 142 1.0E-38 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RPIC12D_RS02830 244998c6d7ebbc2aea2e9120af9930ec 143 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 19 140 1.6E-27 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RPIC12D_RS02830 244998c6d7ebbc2aea2e9120af9930ec 143 SUPERFAMILY SSF53098 16 141 6.68E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS02830 244998c6d7ebbc2aea2e9120af9930ec 143 PANTHER PTHR33317 12 141 5.9E-28 T 22-04-2016 RPIC12D_RS17285 254f0ddb69daae9da322fb5f458a2df0 597 Gene3D G3DSA:3.40.50.300 345 574 1.7E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS17285 254f0ddb69daae9da322fb5f458a2df0 597 Pfam PF13155 Toprim-like 202 285 7.5E-9 T 22-04-2016 RPIC12D_RS17285 254f0ddb69daae9da322fb5f458a2df0 597 Pfam PF13481 AAA domain 326 498 6.0E-8 T 22-04-2016 RPIC12D_RS17285 254f0ddb69daae9da322fb5f458a2df0 597 SUPERFAMILY SSF52540 350 557 1.53E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS17285 254f0ddb69daae9da322fb5f458a2df0 597 Gene3D G3DSA:3.90.580.10 16 94 2.8E-4 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RPIC12D_RS17285 254f0ddb69daae9da322fb5f458a2df0 597 Gene3D G3DSA:3.40.1360.10 185 304 3.6E-30 T 22-04-2016 RPIC12D_RS17285 254f0ddb69daae9da322fb5f458a2df0 597 PANTHER PTHR12873 119 573 5.3E-48 T 22-04-2016 IPR027032 Twinkle-like protein GO:0003697|GO:0043139 RPIC12D_RS17285 254f0ddb69daae9da322fb5f458a2df0 597 SUPERFAMILY SSF56731 125 292 3.4E-35 T 22-04-2016 RPIC12D_RS13830 4efddb037294bab127fd3e618a0a1910 345 Pfam PF00591 Glycosyl transferase family, a/b domain 79 329 6.8E-94 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RPIC12D_RS13830 4efddb037294bab127fd3e618a0a1910 345 PANTHER PTHR11922:SF5 1 342 6.7E-112 T 22-04-2016 RPIC12D_RS13830 4efddb037294bab127fd3e618a0a1910 345 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 68 2.2E-12 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RPIC12D_RS13830 4efddb037294bab127fd3e618a0a1910 345 SUPERFAMILY SSF47648 4 72 1.1E-16 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RPIC12D_RS13830 4efddb037294bab127fd3e618a0a1910 345 SUPERFAMILY SSF52418 79 342 1.15E-99 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RPIC12D_RS13830 4efddb037294bab127fd3e618a0a1910 345 Gene3D G3DSA:3.40.1030.10 79 342 8.2E-107 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RPIC12D_RS13830 4efddb037294bab127fd3e618a0a1910 345 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 339 37.165 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 RPIC12D_RS13830 4efddb037294bab127fd3e618a0a1910 345 PANTHER PTHR11922 1 342 6.7E-112 T 22-04-2016 RPIC12D_RS13830 4efddb037294bab127fd3e618a0a1910 345 Gene3D G3DSA:1.20.970.10 6 72 2.0E-25 T 22-04-2016 RPIC12D_RS13830 4efddb037294bab127fd3e618a0a1910 345 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 338 4.7E-123 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 RPIC12D_RS06360 1625afb5bdbf18c05c05362704ceeab0 419 SUPERFAMILY SSF63867 344 417 5.49E-15 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS06360 1625afb5bdbf18c05c05362704ceeab0 419 SUPERFAMILY SSF53218 186 340 3.66E-41 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS06360 1625afb5bdbf18c05c05362704ceeab0 419 Gene3D G3DSA:2.170.190.11 57 139 4.8E-28 T 22-04-2016 RPIC12D_RS06360 1625afb5bdbf18c05c05362704ceeab0 419 PANTHER PTHR10192 13 419 1.1E-137 T 22-04-2016 RPIC12D_RS06360 1625afb5bdbf18c05c05362704ceeab0 419 SUPERFAMILY SSF63882 13 184 1.7E-49 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS06360 1625afb5bdbf18c05c05362704ceeab0 419 Gene3D G3DSA:2.40.340.10 349 415 3.7E-9 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS06360 1625afb5bdbf18c05c05362704ceeab0 419 Pfam PF03453 MoeA N-terminal region (domain I and II) 16 176 3.7E-36 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS06360 1625afb5bdbf18c05c05362704ceeab0 419 Pfam PF03454 MoeA C-terminal region (domain IV) 350 415 1.4E-10 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS06360 1625afb5bdbf18c05c05362704ceeab0 419 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 262 295 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 RPIC12D_RS06360 1625afb5bdbf18c05c05362704ceeab0 419 Gene3D G3DSA:3.40.980.10 172 348 4.7E-67 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS06360 1625afb5bdbf18c05c05362704ceeab0 419 Gene3D G3DSA:3.90.105.10 140 171 3.7E-20 T 22-04-2016 RPIC12D_RS06360 1625afb5bdbf18c05c05362704ceeab0 419 Pfam PF00994 Probable molybdopterin binding domain 189 333 1.9E-25 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS06360 1625afb5bdbf18c05c05362704ceeab0 419 SMART SM00852 189 335 9.7E-46 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS07530 d4ba2e0f138223b1620eb15a7c1a4f06 265 PANTHER PTHR10657 5 265 1.1E-37 T 22-04-2016 RPIC12D_RS07530 d4ba2e0f138223b1620eb15a7c1a4f06 265 Pfam PF00639 PPIC-type PPIASE domain 142 219 2.3E-22 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RPIC12D_RS07530 d4ba2e0f138223b1620eb15a7c1a4f06 265 PANTHER PTHR10657:SF11 5 265 1.1E-37 T 22-04-2016 RPIC12D_RS07530 d4ba2e0f138223b1620eb15a7c1a4f06 265 Gene3D G3DSA:3.10.50.40 123 242 1.1E-40 T 22-04-2016 RPIC12D_RS07530 d4ba2e0f138223b1620eb15a7c1a4f06 265 SUPERFAMILY SSF54534 130 220 1.05E-28 T 22-04-2016 RPIC12D_RS07530 d4ba2e0f138223b1620eb15a7c1a4f06 265 SUPERFAMILY SSF109998 26 159 2.59E-16 T 22-04-2016 IPR027304 Trigger factor/SurA domain RPIC12D_RS03860 133dafaa8a2b28cfe695a448e59921e4 291 SUPERFAMILY SSF140959 34 290 1.57E-104 T 22-04-2016 RPIC12D_RS03860 133dafaa8a2b28cfe695a448e59921e4 291 Pfam PF03301 Tryptophan 2,3-dioxygenase 202 289 1.9E-26 T 22-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 RPIC12D_RS03860 133dafaa8a2b28cfe695a448e59921e4 291 Pfam PF03301 Tryptophan 2,3-dioxygenase 24 172 7.1E-42 T 22-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 RPIC12D_RS03860 133dafaa8a2b28cfe695a448e59921e4 291 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 28 291 4.5E-138 T 22-04-2016 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 RPIC12D_RS03860 133dafaa8a2b28cfe695a448e59921e4 291 PANTHER PTHR10138 22 291 8.7E-101 T 22-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 RPIC12D_RS03860 133dafaa8a2b28cfe695a448e59921e4 291 PANTHER PTHR10138:SF0 22 291 8.7E-101 T 22-04-2016 RPIC12D_RS03860 133dafaa8a2b28cfe695a448e59921e4 291 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 28 291 41.428 T 22-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 RPIC12D_RS01795 1da752455c64c41d36fd0cad7781e025 554 PIRSF PIRSF000858 1 551 2.8E-199 T 22-04-2016 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 RPIC12D_RS01795 1da752455c64c41d36fd0cad7781e025 554 SUPERFAMILY SSF100950 3 262 6.58E-69 T 22-04-2016 RPIC12D_RS01795 1da752455c64c41d36fd0cad7781e025 554 PANTHER PTHR13707 1 283 8.4E-160 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC12D_RS01795 1da752455c64c41d36fd0cad7781e025 554 PANTHER PTHR13707 300 542 8.4E-160 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC12D_RS01795 1da752455c64c41d36fd0cad7781e025 554 Gene3D G3DSA:3.40.810.20 301 543 2.8E-52 T 22-04-2016 RPIC12D_RS01795 1da752455c64c41d36fd0cad7781e025 554 SMART SM00882 3 252 4.4E-51 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC12D_RS01795 1da752455c64c41d36fd0cad7781e025 554 Gene3D G3DSA:3.40.1080.10 3 251 8.8E-54 T 22-04-2016 RPIC12D_RS01795 1da752455c64c41d36fd0cad7781e025 554 SUPERFAMILY SSF100950 300 545 9.3E-60 T 22-04-2016 RPIC12D_RS01795 1da752455c64c41d36fd0cad7781e025 554 Pfam PF01144 Coenzyme A transferase 6 252 4.5E-21 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC12D_RS01795 1da752455c64c41d36fd0cad7781e025 554 PANTHER PTHR13707:SF38 1 283 8.4E-160 T 22-04-2016 RPIC12D_RS01795 1da752455c64c41d36fd0cad7781e025 554 PANTHER PTHR13707:SF38 300 542 8.4E-160 T 22-04-2016 RPIC12D_RS02585 cf0d1e897119ba289bc2ba88f3ac239a 259 PANTHER PTHR30462 42 232 7.1E-15 T 22-04-2016 RPIC12D_RS02585 cf0d1e897119ba289bc2ba88f3ac239a 259 Pfam PF04403 Paraquat-inducible protein A 82 232 4.7E-38 T 22-04-2016 IPR007498 Paraquat-inducible protein A RPIC12D_RS02585 cf0d1e897119ba289bc2ba88f3ac239a 259 PANTHER PTHR30462:SF3 42 232 7.1E-15 T 22-04-2016 RPIC12D_RS10780 4580084837bb7b5c0cadc9c8290e4774 438 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 7.9E-33 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 RPIC12D_RS10780 4580084837bb7b5c0cadc9c8290e4774 438 PRINTS PR00981 Seryl-tRNA synthetase signature 345 361 1.1E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RPIC12D_RS10780 4580084837bb7b5c0cadc9c8290e4774 438 PRINTS PR00981 Seryl-tRNA synthetase signature 363 379 1.1E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RPIC12D_RS10780 4580084837bb7b5c0cadc9c8290e4774 438 PRINTS PR00981 Seryl-tRNA synthetase signature 276 288 1.1E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RPIC12D_RS10780 4580084837bb7b5c0cadc9c8290e4774 438 PRINTS PR00981 Seryl-tRNA synthetase signature 288 301 1.1E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RPIC12D_RS10780 4580084837bb7b5c0cadc9c8290e4774 438 PRINTS PR00981 Seryl-tRNA synthetase signature 328 341 1.1E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RPIC12D_RS10780 4580084837bb7b5c0cadc9c8290e4774 438 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 235 411 2.8E-35 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS10780 4580084837bb7b5c0cadc9c8290e4774 438 Gene3D G3DSA:3.30.930.10 105 432 3.5E-140 T 22-04-2016 RPIC12D_RS10780 4580084837bb7b5c0cadc9c8290e4774 438 SUPERFAMILY SSF55681 116 431 4.35E-101 T 22-04-2016 RPIC12D_RS10780 4580084837bb7b5c0cadc9c8290e4774 438 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.008 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RPIC12D_RS10780 4580084837bb7b5c0cadc9c8290e4774 438 PIRSF PIRSF001529 1 437 5.5E-178 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RPIC12D_RS10780 4580084837bb7b5c0cadc9c8290e4774 438 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 2.8E-162 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RPIC12D_RS10780 4580084837bb7b5c0cadc9c8290e4774 438 SUPERFAMILY SSF46589 1 112 8.37E-31 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RPIC12D_RS10780 4580084837bb7b5c0cadc9c8290e4774 438 Gene3D G3DSA:1.10.287.40 1 104 1.1E-28 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 RPIC12D_RS10780 4580084837bb7b5c0cadc9c8290e4774 438 PANTHER PTHR11778:SF0 1 436 1.3E-208 T 22-04-2016 RPIC12D_RS10780 4580084837bb7b5c0cadc9c8290e4774 438 PANTHER PTHR11778 1 436 1.3E-208 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RPIC12D_RS16565 e737dc8ef55d077efa8ca39028130095 147 SUPERFAMILY SSF54637 17 137 2.13E-29 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS16565 e737dc8ef55d077efa8ca39028130095 147 PANTHER PTHR31793 1 147 9.2E-27 T 22-04-2016 RPIC12D_RS16565 e737dc8ef55d077efa8ca39028130095 147 Pfam PF13279 Thioesterase-like superfamily 19 129 8.3E-11 T 22-04-2016 RPIC12D_RS16565 e737dc8ef55d077efa8ca39028130095 147 Gene3D G3DSA:3.10.129.10 7 137 9.1E-34 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS09460 0aea6b0a76afdb17d1c5f6f5dfc9daf2 488 PANTHER PTHR22773:SF40 1 483 6.5E-207 T 22-04-2016 RPIC12D_RS09460 0aea6b0a76afdb17d1c5f6f5dfc9daf2 488 Pfam PF00361 Proton-conducting membrane transporter 130 413 1.6E-79 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RPIC12D_RS09460 0aea6b0a76afdb17d1c5f6f5dfc9daf2 488 PANTHER PTHR22773 1 483 6.5E-207 T 22-04-2016 RPIC12D_RS09460 0aea6b0a76afdb17d1c5f6f5dfc9daf2 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 5.813007E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RPIC12D_RS09460 0aea6b0a76afdb17d1c5f6f5dfc9daf2 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 233 257 5.813007E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RPIC12D_RS09460 0aea6b0a76afdb17d1c5f6f5dfc9daf2 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 321 340 5.813007E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RPIC12D_RS09460 0aea6b0a76afdb17d1c5f6f5dfc9daf2 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 373 399 5.813007E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RPIC12D_RS09460 0aea6b0a76afdb17d1c5f6f5dfc9daf2 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 134 153 5.813007E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RPIC12D_RS09460 0aea6b0a76afdb17d1c5f6f5dfc9daf2 488 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 58 121 1.5E-5 T 22-04-2016 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692 RPIC12D_RS09460 0aea6b0a76afdb17d1c5f6f5dfc9daf2 488 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 482 1.7E-187 T 22-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 RPIC12D_RS00355 3289e59a1c331f52b80ad260009cdb5f 337 SUPERFAMILY SSF50129 10 147 3.04E-34 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS00355 3289e59a1c331f52b80ad260009cdb5f 337 SMART SM00829 13 334 1.9E-13 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIC12D_RS00355 3289e59a1c331f52b80ad260009cdb5f 337 Gene3D G3DSA:3.90.180.10 2 158 3.9E-38 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS00355 3289e59a1c331f52b80ad260009cdb5f 337 Pfam PF13602 Zinc-binding dehydrogenase 194 334 2.5E-22 T 22-04-2016 RPIC12D_RS00355 3289e59a1c331f52b80ad260009cdb5f 337 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 150 171 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 RPIC12D_RS00355 3289e59a1c331f52b80ad260009cdb5f 337 SUPERFAMILY SSF51735 117 286 3.4E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS00355 3289e59a1c331f52b80ad260009cdb5f 337 Gene3D G3DSA:3.40.50.720 159 264 3.4E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS00355 3289e59a1c331f52b80ad260009cdb5f 337 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 337 4.7E-172 T 22-04-2016 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 RPIC12D_RS00355 3289e59a1c331f52b80ad260009cdb5f 337 PANTHER PTHR11695:SF558 18 335 9.4E-133 T 22-04-2016 RPIC12D_RS00355 3289e59a1c331f52b80ad260009cdb5f 337 PANTHER PTHR11695 18 335 9.4E-133 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RPIC12D_RS00355 3289e59a1c331f52b80ad260009cdb5f 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 90 4.6E-7 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIC12D_RS15350 9b83c20a4098793061565c7d62a63459 479 Pfam PF08411 Exonuclease C-terminal 208 475 3.0E-96 T 22-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 RPIC12D_RS15350 9b83c20a4098793061565c7d62a63459 479 SUPERFAMILY SSF53098 6 476 6.75E-127 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS15350 9b83c20a4098793061565c7d62a63459 479 Pfam PF00929 Exonuclease 8 189 9.9E-20 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIC12D_RS15350 9b83c20a4098793061565c7d62a63459 479 PIRSF PIRSF000977 2 479 3.1E-205 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 RPIC12D_RS15350 9b83c20a4098793061565c7d62a63459 479 Gene3D G3DSA:3.30.420.10 5 196 2.2E-76 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS15350 9b83c20a4098793061565c7d62a63459 479 PANTHER PTHR11046 5 477 6.8E-195 T 22-04-2016 RPIC12D_RS15350 9b83c20a4098793061565c7d62a63459 479 PANTHER PTHR11046:SF2 5 477 6.8E-195 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 RPIC12D_RS13375 d612f7ace296192824404f81bc939e02 949 Pfam PF00176 SNF2 family N-terminal domain 115 286 4.9E-15 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 RPIC12D_RS13375 d612f7ace296192824404f81bc939e02 949 Gene3D G3DSA:3.40.50.300 101 286 2.8E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13375 d612f7ace296192824404f81bc939e02 949 Gene3D G3DSA:3.40.50.300 462 601 1.1E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13375 d612f7ace296192824404f81bc939e02 949 PANTHER PTHR10799:SF688 650 694 4.2E-90 T 22-04-2016 RPIC12D_RS13375 d612f7ace296192824404f81bc939e02 949 PANTHER PTHR10799:SF688 461 612 4.2E-90 T 22-04-2016 RPIC12D_RS13375 d612f7ace296192824404f81bc939e02 949 PANTHER PTHR10799:SF688 15 40 4.2E-90 T 22-04-2016 RPIC12D_RS13375 d612f7ace296192824404f81bc939e02 949 PANTHER PTHR10799:SF688 407 436 4.2E-90 T 22-04-2016 RPIC12D_RS13375 d612f7ace296192824404f81bc939e02 949 PANTHER PTHR10799:SF688 89 389 4.2E-90 T 22-04-2016 RPIC12D_RS13375 d612f7ace296192824404f81bc939e02 949 SMART SM00487 98 312 1.7E-19 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC12D_RS13375 d612f7ace296192824404f81bc939e02 949 PANTHER PTHR10799 650 694 4.2E-90 T 22-04-2016 RPIC12D_RS13375 d612f7ace296192824404f81bc939e02 949 PANTHER PTHR10799 461 612 4.2E-90 T 22-04-2016 RPIC12D_RS13375 d612f7ace296192824404f81bc939e02 949 PANTHER PTHR10799 15 40 4.2E-90 T 22-04-2016 RPIC12D_RS13375 d612f7ace296192824404f81bc939e02 949 PANTHER PTHR10799 407 436 4.2E-90 T 22-04-2016 RPIC12D_RS13375 d612f7ace296192824404f81bc939e02 949 PANTHER PTHR10799 89 389 4.2E-90 T 22-04-2016 RPIC12D_RS13375 d612f7ace296192824404f81bc939e02 949 Pfam PF00271 Helicase conserved C-terminal domain 467 580 9.2E-16 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS13375 d612f7ace296192824404f81bc939e02 949 SUPERFAMILY SSF52540 151 316 4.51E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13375 d612f7ace296192824404f81bc939e02 949 SUPERFAMILY SSF52540 467 594 4.51E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13375 d612f7ace296192824404f81bc939e02 949 SMART SM00490 496 580 8.4E-16 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS11085 1e96ee736ea217d71a38c78d14ddbbc6 354 PANTHER PTHR21712 7 351 2.2E-111 T 22-04-2016 RPIC12D_RS11085 1e96ee736ea217d71a38c78d14ddbbc6 354 Gene3D G3DSA:3.40.50.10210 69 330 9.1E-106 T 22-04-2016 RPIC12D_RS11085 1e96ee736ea217d71a38c78d14ddbbc6 354 Gene3D G3DSA:1.10.1610.10 6 68 4.9E-32 T 22-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RPIC12D_RS11085 1e96ee736ea217d71a38c78d14ddbbc6 354 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 9 350 35.43 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RPIC12D_RS11085 1e96ee736ea217d71a38c78d14ddbbc6 354 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 11 348 5.2E-131 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RPIC12D_RS11085 1e96ee736ea217d71a38c78d14ddbbc6 354 SUPERFAMILY SSF52733 5 349 1.11E-116 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RPIC12D_RS11085 1e96ee736ea217d71a38c78d14ddbbc6 354 PANTHER PTHR21712:SF4 7 351 2.2E-111 T 22-04-2016 RPIC12D_RS11085 1e96ee736ea217d71a38c78d14ddbbc6 354 Pfam PF02277 Phosphoribosyltransferase 7 348 3.7E-129 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RPIC12D_RS11460 aa9850cca46f1c419f0a896180cc7967 98 SUPERFAMILY SSF46785 28 76 1.36E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS11460 aa9850cca46f1c419f0a896180cc7967 98 Gene3D G3DSA:1.10.10.10 24 82 1.3E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS14020 5afd2b5d76bc37fcef9d731cacaa60ea 300 Gene3D G3DSA:1.10.8.10 17 92 7.3E-23 T 22-04-2016 RPIC12D_RS14020 5afd2b5d76bc37fcef9d731cacaa60ea 300 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 12 288 42.683 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RPIC12D_RS14020 5afd2b5d76bc37fcef9d731cacaa60ea 300 Pfam PF05175 Methyltransferase small domain 111 207 1.5E-11 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 RPIC12D_RS14020 5afd2b5d76bc37fcef9d731cacaa60ea 300 Gene3D G3DSA:3.40.50.150 94 288 2.9E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS14020 5afd2b5d76bc37fcef9d731cacaa60ea 300 PANTHER PTHR18895 10 288 1.7E-90 T 22-04-2016 RPIC12D_RS14020 5afd2b5d76bc37fcef9d731cacaa60ea 300 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 193 199 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RPIC12D_RS14020 5afd2b5d76bc37fcef9d731cacaa60ea 300 SUPERFAMILY SSF53335 17 285 1.09E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS14020 5afd2b5d76bc37fcef9d731cacaa60ea 300 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 31 283 5.1E-83 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RPIC12D_RS14020 5afd2b5d76bc37fcef9d731cacaa60ea 300 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 12 284 1.5E-66 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 RPIC12D_RS14020 5afd2b5d76bc37fcef9d731cacaa60ea 300 PANTHER PTHR18895:SF64 10 288 1.7E-90 T 22-04-2016 RPIC12D_RS03870 6e409674611bdff53d78af7e147a9539 209 PANTHER PTHR31118 2 205 6.0E-45 T 22-04-2016 RPIC12D_RS03870 6e409674611bdff53d78af7e147a9539 209 Pfam PF04199 Putative cyclase 7 151 7.9E-16 T 22-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 RPIC12D_RS03870 6e409674611bdff53d78af7e147a9539 209 Hamap MF_01969 Kynurenine formamidase [kynB]. 4 208 44.69 T 22-04-2016 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 RPIC12D_RS03870 6e409674611bdff53d78af7e147a9539 209 TIGRFAM TIGR03035 trp_arylform: arylformamidase 5 208 4.5E-103 T 22-04-2016 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 RPIC12D_RS03870 6e409674611bdff53d78af7e147a9539 209 SUPERFAMILY SSF102198 4 206 4.45E-55 T 22-04-2016 RPIC12D_RS03870 6e409674611bdff53d78af7e147a9539 209 Gene3D G3DSA:3.50.30.50 4 205 7.6E-52 T 22-04-2016 RPIC12D_RS24465 9127c7cc2c9f252bf179e4841f0792c4 155 Pfam PF06527 TniQ 37 91 6.6E-10 T 22-04-2016 IPR009492 TniQ RPIC12D_RS01165 b99c732fa2a0d742d94c5e4108f6159f 313 SUPERFAMILY SSF53335 253 285 3.84E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS01165 b99c732fa2a0d742d94c5e4108f6159f 313 SUPERFAMILY SSF53335 13 224 3.84E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS01165 b99c732fa2a0d742d94c5e4108f6159f 313 Gene3D G3DSA:3.40.50.150 23 226 3.3E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS01165 b99c732fa2a0d742d94c5e4108f6159f 313 Pfam PF08241 Methyltransferase domain 52 161 8.0E-19 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RPIC12D_RS01165 b99c732fa2a0d742d94c5e4108f6159f 313 PANTHER PTHR13090:SF3 9 88 3.5E-30 T 22-04-2016 RPIC12D_RS01165 b99c732fa2a0d742d94c5e4108f6159f 313 PANTHER PTHR13090:SF3 105 312 3.5E-30 T 22-04-2016 RPIC12D_RS01165 b99c732fa2a0d742d94c5e4108f6159f 313 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 7 285 25.592 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 RPIC12D_RS01165 b99c732fa2a0d742d94c5e4108f6159f 313 PANTHER PTHR13090 9 88 3.5E-30 T 22-04-2016 RPIC12D_RS01165 b99c732fa2a0d742d94c5e4108f6159f 313 PANTHER PTHR13090 105 312 3.5E-30 T 22-04-2016 RPIC12D_RS04185 baa829d2e60d04cf4c7c1dede43c54b9 238 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 12 229 9.2E-85 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 RPIC12D_RS04185 baa829d2e60d04cf4c7c1dede43c54b9 238 PANTHER PTHR10108:SF910 7 233 4.5E-114 T 22-04-2016 RPIC12D_RS04185 baa829d2e60d04cf4c7c1dede43c54b9 238 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 10 235 39.131 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 RPIC12D_RS04185 baa829d2e60d04cf4c7c1dede43c54b9 238 Pfam PF13489 Methyltransferase domain 51 202 1.3E-23 T 22-04-2016 RPIC12D_RS04185 baa829d2e60d04cf4c7c1dede43c54b9 238 PANTHER PTHR10108 7 233 4.5E-114 T 22-04-2016 RPIC12D_RS04185 baa829d2e60d04cf4c7c1dede43c54b9 238 Gene3D G3DSA:3.40.50.150 23 231 2.9E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS04185 baa829d2e60d04cf4c7c1dede43c54b9 238 SUPERFAMILY SSF53335 14 231 1.27E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS13065 8b7def9fcabf978f4c6c6d82fbe3323f 320 Gene3D G3DSA:1.20.58.340 243 319 3.7E-27 T 22-04-2016 RPIC12D_RS13065 8b7def9fcabf978f4c6c6d82fbe3323f 320 PANTHER PTHR21535:SF37 1 319 5.3E-99 T 22-04-2016 RPIC12D_RS13065 8b7def9fcabf978f4c6c6d82fbe3323f 320 Pfam PF01544 CorA-like Mg2+ transporter protein 29 315 1.3E-58 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RPIC12D_RS13065 8b7def9fcabf978f4c6c6d82fbe3323f 320 PANTHER PTHR21535 1 319 5.3E-99 T 22-04-2016 RPIC12D_RS13065 8b7def9fcabf978f4c6c6d82fbe3323f 320 SUPERFAMILY SSF144083 254 317 3.14E-20 T 22-04-2016 RPIC12D_RS13065 8b7def9fcabf978f4c6c6d82fbe3323f 320 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 2 319 4.4E-76 T 22-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 RPIC12D_RS13065 8b7def9fcabf978f4c6c6d82fbe3323f 320 SUPERFAMILY SSF143865 1 258 1.05E-37 T 22-04-2016 RPIC12D_RS02110 50b65684475eb5c2f8e2178caebccdd0 330 Gene3D G3DSA:3.40.50.300 118 320 9.3E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS02110 50b65684475eb5c2f8e2178caebccdd0 330 PANTHER PTHR30473 1 329 4.1E-161 T 22-04-2016 RPIC12D_RS02110 50b65684475eb5c2f8e2178caebccdd0 330 SUPERFAMILY SSF52540 117 296 5.57E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS02110 50b65684475eb5c2f8e2178caebccdd0 330 Pfam PF02562 PhoH-like protein 119 321 2.4E-93 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 RPIC12D_RS02110 50b65684475eb5c2f8e2178caebccdd0 330 PANTHER PTHR30473:SF1 1 329 4.1E-161 T 22-04-2016 RPIC12D_RS11650 7a49ee5295cf3d72689c6e81916bde0a 77 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 3.6E-28 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS11650 7a49ee5295cf3d72689c6e81916bde0a 77 Gene3D G3DSA:2.30.170.40 2 76 3.4E-37 T 22-04-2016 RPIC12D_RS11650 7a49ee5295cf3d72689c6e81916bde0a 77 PANTHER PTHR13528 1 68 1.9E-34 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 RPIC12D_RS11650 7a49ee5295cf3d72689c6e81916bde0a 77 SUPERFAMILY SSF143800 1 76 7.26E-31 T 22-04-2016 RPIC12D_RS11650 7a49ee5295cf3d72689c6e81916bde0a 77 Pfam PF00830 Ribosomal L28 family 3 62 6.3E-28 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 RPIC12D_RS11650 7a49ee5295cf3d72689c6e81916bde0a 77 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.439 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS16355 c44eb75a15eed7d0acd8f27c76edd36c 657 Pfam PF13520 Amino acid permease 61 444 4.7E-17 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC12D_RS16355 c44eb75a15eed7d0acd8f27c76edd36c 657 PANTHER PTHR11785 36 303 2.3E-57 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC12D_RS16355 c44eb75a15eed7d0acd8f27c76edd36c 657 PANTHER PTHR11785 327 477 2.3E-57 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC12D_RS16355 c44eb75a15eed7d0acd8f27c76edd36c 657 PANTHER PTHR11785:SF125 36 303 2.3E-57 T 22-04-2016 RPIC12D_RS16355 c44eb75a15eed7d0acd8f27c76edd36c 657 PANTHER PTHR11785:SF125 327 477 2.3E-57 T 22-04-2016 RPIC12D_RS02990 c745ef0d8a6f68fc58e71b9052afa7b5 332 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 316 9.5E-48 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RPIC12D_RS02990 c745ef0d8a6f68fc58e71b9052afa7b5 332 Gene3D G3DSA:3.40.50.2000 178 308 1.4E-31 T 22-04-2016 RPIC12D_RS02990 c745ef0d8a6f68fc58e71b9052afa7b5 332 Gene3D G3DSA:3.40.50.2000 1 164 4.9E-32 T 22-04-2016 RPIC12D_RS02990 c745ef0d8a6f68fc58e71b9052afa7b5 332 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 329 8.5E-123 T 22-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 RPIC12D_RS02990 c745ef0d8a6f68fc58e71b9052afa7b5 332 SUPERFAMILY SSF53756 1 317 3.92E-70 T 22-04-2016 RPIC12D_RS02990 c745ef0d8a6f68fc58e71b9052afa7b5 332 PANTHER PTHR30160 1 302 7.0E-63 T 22-04-2016 RPIC12D_RS02990 c745ef0d8a6f68fc58e71b9052afa7b5 332 PANTHER PTHR30160:SF8 1 302 7.0E-63 T 22-04-2016 RPIC12D_RS11130 e95101b0a25829dfc027a2c3c08e1a6c 300 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 141 153 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RPIC12D_RS11130 e95101b0a25829dfc027a2c3c08e1a6c 300 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 285 6.0E-79 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RPIC12D_RS11130 e95101b0a25829dfc027a2c3c08e1a6c 300 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 291 1.7E-84 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RPIC12D_RS11130 e95101b0a25829dfc027a2c3c08e1a6c 300 PANTHER PTHR30589:SF0 1 289 8.3E-103 T 22-04-2016 RPIC12D_RS11130 e95101b0a25829dfc027a2c3c08e1a6c 300 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 290 20.373 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RPIC12D_RS11130 e95101b0a25829dfc027a2c3c08e1a6c 300 PANTHER PTHR30589 1 289 8.3E-103 T 22-04-2016 RPIC12D_RS06670 1d8b293f25a28317df138ab4644e06bc 114 Gene3D G3DSA:3.40.30.10 1 114 3.9E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS06670 1d8b293f25a28317df138ab4644e06bc 114 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 4 111 4.0E-29 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR RPIC12D_RS06670 1d8b293f25a28317df138ab4644e06bc 114 Pfam PF03960 ArsC family 6 112 1.5E-17 T 22-04-2016 IPR006660 Arsenate reductase-like RPIC12D_RS06670 1d8b293f25a28317df138ab4644e06bc 114 SUPERFAMILY SSF52833 1 114 4.07E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS06670 1d8b293f25a28317df138ab4644e06bc 114 PANTHER PTHR30041:SF3 1 114 3.6E-36 T 22-04-2016 RPIC12D_RS06670 1d8b293f25a28317df138ab4644e06bc 114 PANTHER PTHR30041 1 114 3.6E-36 T 22-04-2016 RPIC12D_RS15120 6b83bf403fd1df8fb168691b29be84e0 296 PANTHER PTHR24320 1 197 2.5E-51 T 22-04-2016 RPIC12D_RS15120 6b83bf403fd1df8fb168691b29be84e0 296 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC12D_RS15120 6b83bf403fd1df8fb168691b29be84e0 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 3.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15120 6b83bf403fd1df8fb168691b29be84e0 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15120 6b83bf403fd1df8fb168691b29be84e0 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 3.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15120 6b83bf403fd1df8fb168691b29be84e0 296 SUPERFAMILY SSF51735 1 277 1.12E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS15120 6b83bf403fd1df8fb168691b29be84e0 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15120 6b83bf403fd1df8fb168691b29be84e0 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15120 6b83bf403fd1df8fb168691b29be84e0 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 3.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15120 6b83bf403fd1df8fb168691b29be84e0 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 3.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15120 6b83bf403fd1df8fb168691b29be84e0 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15120 6b83bf403fd1df8fb168691b29be84e0 296 Gene3D G3DSA:3.40.50.720 6 246 7.3E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS15120 6b83bf403fd1df8fb168691b29be84e0 296 Pfam PF00106 short chain dehydrogenase 7 202 3.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS15120 6b83bf403fd1df8fb168691b29be84e0 296 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 196 1.2E-4 T 22-04-2016 RPIC12D_RS03295 be0c778d9547bb02d175fdeb3cc3579c 280 SUPERFAMILY SSF52402 9 192 4.89E-15 T 22-04-2016 RPIC12D_RS03295 be0c778d9547bb02d175fdeb3cc3579c 280 Gene3D G3DSA:3.40.50.620 9 183 8.8E-18 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS03295 be0c778d9547bb02d175fdeb3cc3579c 280 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 12 183 1.3E-5 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 RPIC12D_RS12760 bffdd89a008ec475225ecfa59a3eb534 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 22 102 5.9E-30 T 22-04-2016 IPR003849 Preprotein translocase YajC RPIC12D_RS12760 bffdd89a008ec475225ecfa59a3eb534 110 PANTHER PTHR33909 1 108 4.6E-31 T 22-04-2016 RPIC12D_RS12760 bffdd89a008ec475225ecfa59a3eb534 110 PANTHER PTHR33909:SF1 1 108 4.6E-31 T 22-04-2016 RPIC12D_RS12760 bffdd89a008ec475225ecfa59a3eb534 110 Pfam PF02699 Preprotein translocase subunit 23 99 5.4E-32 T 22-04-2016 IPR003849 Preprotein translocase YajC RPIC12D_RS12760 bffdd89a008ec475225ecfa59a3eb534 110 SMART SM01323 20 102 1.8E-47 T 22-04-2016 IPR003849 Preprotein translocase YajC RPIC12D_RS12760 bffdd89a008ec475225ecfa59a3eb534 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 22 42 2.4E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC RPIC12D_RS12760 bffdd89a008ec475225ecfa59a3eb534 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 60 78 2.4E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC RPIC12D_RS13940 0c36c437a5b57ff6b55be00159b12a81 354 Pfam PF13609 Gram-negative porin 12 323 3.4E-48 T 22-04-2016 RPIC12D_RS13940 0c36c437a5b57ff6b55be00159b12a81 354 Gene3D G3DSA:2.40.160.10 24 354 2.4E-89 T 22-04-2016 IPR023614 Porin domain RPIC12D_RS13940 0c36c437a5b57ff6b55be00159b12a81 354 SUPERFAMILY SSF56935 24 354 7.53E-79 T 22-04-2016 RPIC12D_RS03225 9ea8a5f9363c30b3ada438b90f9b6373 140 PANTHER PTHR30041:SF0 1 136 5.3E-51 T 22-04-2016 RPIC12D_RS03225 9ea8a5f9363c30b3ada438b90f9b6373 140 Pfam PF03960 ArsC family 7 114 7.4E-20 T 22-04-2016 IPR006660 Arsenate reductase-like RPIC12D_RS03225 9ea8a5f9363c30b3ada438b90f9b6373 140 PANTHER PTHR30041 1 136 5.3E-51 T 22-04-2016 RPIC12D_RS03225 9ea8a5f9363c30b3ada438b90f9b6373 140 SUPERFAMILY SSF52833 4 138 8.47E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS03225 9ea8a5f9363c30b3ada438b90f9b6373 140 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 4.8E-43 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 RPIC12D_RS03225 9ea8a5f9363c30b3ada438b90f9b6373 140 Gene3D G3DSA:3.40.30.10 1 140 1.0E-61 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS00840 b762b4af18c339a724a16cb02940d70b 284 Gene3D G3DSA:1.10.620.20 12 184 1.7E-23 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RPIC12D_RS00840 b762b4af18c339a724a16cb02940d70b 284 SUPERFAMILY SSF47240 5 277 1.06E-49 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC12D_RS13045 aaf62ebdd4a682614c0c0801dae2e8c2 191 SUPERFAMILY SSF101307 35 189 1.96E-33 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 RPIC12D_RS13045 aaf62ebdd4a682614c0c0801dae2e8c2 191 PANTHER PTHR36305 27 191 4.7E-45 T 22-04-2016 RPIC12D_RS13045 aaf62ebdd4a682614c0c0801dae2e8c2 191 Pfam PF04608 Phosphatidylglycerophosphatase A 42 188 4.4E-46 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 RPIC12D_RS03430 87e6045b1308b43d1492cb0f3684702e 467 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 52 462 4.7E-175 T 22-04-2016 IPR021204 Integrating conjugative element protein, PFL4711 RPIC12D_RS13085 7bbc0b35def96d0c1860a7c4b1db77f5 698 PANTHER PTHR23355:SF5 240 622 3.4E-36 T 22-04-2016 RPIC12D_RS13085 7bbc0b35def96d0c1860a7c4b1db77f5 698 Pfam PF00773 RNB domain 480 523 5.3E-10 T 22-04-2016 RPIC12D_RS13085 7bbc0b35def96d0c1860a7c4b1db77f5 698 Pfam PF00773 RNB domain 241 476 2.4E-32 T 22-04-2016 RPIC12D_RS13085 7bbc0b35def96d0c1860a7c4b1db77f5 698 SUPERFAMILY SSF50249 227 574 8.0E-70 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS13085 7bbc0b35def96d0c1860a7c4b1db77f5 698 PANTHER PTHR23355 240 622 3.4E-36 T 22-04-2016 RPIC12D_RS13085 7bbc0b35def96d0c1860a7c4b1db77f5 698 SMART SM00955 235 525 6.8E-64 T 22-04-2016 RPIC12D_RS01335 a4800f5924a3729454ad324dc164197b 498 Gene3D G3DSA:3.30.830.10 286 472 1.5E-27 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RPIC12D_RS01335 a4800f5924a3729454ad324dc164197b 498 PANTHER PTHR11851:SF136 61 481 2.5E-106 T 22-04-2016 RPIC12D_RS01335 a4800f5924a3729454ad324dc164197b 498 Gene3D G3DSA:3.30.830.10 59 270 8.0E-54 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RPIC12D_RS01335 a4800f5924a3729454ad324dc164197b 498 SUPERFAMILY SSF63411 60 270 4.95E-58 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RPIC12D_RS01335 a4800f5924a3729454ad324dc164197b 498 Pfam PF05193 Peptidase M16 inactive domain 226 408 6.7E-27 T 22-04-2016 IPR007863 Peptidase M16, C-terminal RPIC12D_RS01335 a4800f5924a3729454ad324dc164197b 498 Pfam PF00675 Insulinase (Peptidase family M16) 74 217 3.1E-27 T 22-04-2016 IPR011765 Peptidase M16, N-terminal RPIC12D_RS01335 a4800f5924a3729454ad324dc164197b 498 SUPERFAMILY SSF63411 286 476 5.74E-35 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RPIC12D_RS01335 a4800f5924a3729454ad324dc164197b 498 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 92 115 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 RPIC12D_RS01335 a4800f5924a3729454ad324dc164197b 498 PANTHER PTHR11851 61 481 2.5E-106 T 22-04-2016 RPIC12D_RS04150 ae0b949d1884f5e56d558622b2ed30f0 853 Pfam PF13953 PapC C-terminal domain 776 838 4.5E-17 T 22-04-2016 IPR025949 PapC-like, C-terminal domain RPIC12D_RS04150 ae0b949d1884f5e56d558622b2ed30f0 853 SUPERFAMILY SSF141729 80 194 4.71E-35 T 22-04-2016 RPIC12D_RS04150 ae0b949d1884f5e56d558622b2ed30f0 853 PANTHER PTHR30451 23 853 4.2E-270 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS04150 ae0b949d1884f5e56d558622b2ed30f0 853 Pfam PF00577 Outer membrane usher protein 220 766 5.5E-163 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS04150 ae0b949d1884f5e56d558622b2ed30f0 853 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 330 340 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site RPIC12D_RS04150 ae0b949d1884f5e56d558622b2ed30f0 853 PANTHER PTHR30451:SF2 23 853 4.2E-270 T 22-04-2016 RPIC12D_RS04150 ae0b949d1884f5e56d558622b2ed30f0 853 Pfam PF13954 PapC N-terminal domain 59 203 2.4E-45 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 RPIC12D_RS16875 c59e60229a9d1ec8140b1a80ff580b87 170 PANTHER PTHR37484 5 164 5.9E-21 T 22-04-2016 RPIC12D_RS16875 c59e60229a9d1ec8140b1a80ff580b87 170 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 12 155 1.3E-29 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 RPIC12D_RS16875 c59e60229a9d1ec8140b1a80ff580b87 170 Pfam PF04093 rod shape-determining protein MreD 11 154 6.6E-16 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 RPIC12D_RS16875 c59e60229a9d1ec8140b1a80ff580b87 170 PIRSF PIRSF018472 4 164 1.9E-41 T 22-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type RPIC12D_RS08465 7e131229a5e04b66f75886252ee3ecc2 161 Pfam PF05638 Type VI secretion system effector, Hcp 6 136 1.4E-40 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp RPIC12D_RS08465 7e131229a5e04b66f75886252ee3ecc2 161 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 143 9.9E-19 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp RPIC12D_RS08465 7e131229a5e04b66f75886252ee3ecc2 161 Gene3D G3DSA:2.30.110.20 1 160 2.3E-64 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp RPIC12D_RS08465 7e131229a5e04b66f75886252ee3ecc2 161 SUPERFAMILY SSF141452 2 160 2.35E-52 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp RPIC12D_RS08465 7e131229a5e04b66f75886252ee3ecc2 161 PANTHER PTHR36152:SF1 1 161 2.7E-82 T 22-04-2016 RPIC12D_RS08465 7e131229a5e04b66f75886252ee3ecc2 161 PANTHER PTHR36152 1 161 2.7E-82 T 22-04-2016 RPIC12D_RS13615 e18d32d5006f6c27e7222a999ea562d7 331 Gene3D G3DSA:3.30.470.20 100 118 4.4E-43 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC12D_RS13615 e18d32d5006f6c27e7222a999ea562d7 331 Gene3D G3DSA:3.30.470.20 189 315 4.4E-43 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC12D_RS13615 e18d32d5006f6c27e7222a999ea562d7 331 Pfam PF07478 D-ala D-ala ligase C-terminus 119 314 9.2E-58 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS13615 e18d32d5006f6c27e7222a999ea562d7 331 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 18 319 34.288 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS13615 e18d32d5006f6c27e7222a999ea562d7 331 SUPERFAMILY SSF56059 111 322 3.71E-55 T 22-04-2016 RPIC12D_RS13615 e18d32d5006f6c27e7222a999ea562d7 331 Gene3D G3DSA:3.30.1490.20 122 188 4.7E-23 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC12D_RS13615 e18d32d5006f6c27e7222a999ea562d7 331 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 78 89 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS13615 e18d32d5006f6c27e7222a999ea562d7 331 PANTHER PTHR23132 19 318 1.8E-89 T 22-04-2016 RPIC12D_RS13615 e18d32d5006f6c27e7222a999ea562d7 331 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 19 318 6.5E-96 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS13615 e18d32d5006f6c27e7222a999ea562d7 331 SUPERFAMILY SSF52440 19 111 3.45E-30 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS13615 e18d32d5006f6c27e7222a999ea562d7 331 Pfam PF01820 D-ala D-ala ligase N-terminus 19 101 7.3E-21 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS13615 e18d32d5006f6c27e7222a999ea562d7 331 Gene3D G3DSA:3.40.50.20 19 99 1.2E-27 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS13615 e18d32d5006f6c27e7222a999ea562d7 331 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 260 289 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS03920 ddc55b71267000f39f09b9f7c2628e00 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 10 212 40.727 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RPIC12D_RS03920 ddc55b71267000f39f09b9f7c2628e00 212 Gene3D G3DSA:2.30.110.10 16 212 6.7E-87 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RPIC12D_RS03920 ddc55b71267000f39f09b9f7c2628e00 212 PANTHER PTHR10851 1 212 1.6E-111 T 22-04-2016 RPIC12D_RS03920 ddc55b71267000f39f09b9f7c2628e00 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 212 3.7E-19 T 22-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RPIC12D_RS03920 ddc55b71267000f39f09b9f7c2628e00 212 PIRSF PIRSF000190 1 212 1.7E-82 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RPIC12D_RS03920 ddc55b71267000f39f09b9f7c2628e00 212 SUPERFAMILY SSF50475 7 212 8.93E-71 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RPIC12D_RS03920 ddc55b71267000f39f09b9f7c2628e00 212 PANTHER PTHR10851:SF0 1 212 1.6E-111 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RPIC12D_RS03920 ddc55b71267000f39f09b9f7c2628e00 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 212 4.8E-88 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RPIC12D_RS03920 ddc55b71267000f39f09b9f7c2628e00 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 119 5.6E-29 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RPIC12D_RS03920 ddc55b71267000f39f09b9f7c2628e00 212 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 22-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RPIC12D_RS02845 0dbb0e6176fda4940ef1fc53567c3e21 425 SUPERFAMILY SSF51338 1 55 7.97E-28 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS02845 0dbb0e6176fda4940ef1fc53567c3e21 425 SUPERFAMILY SSF51338 367 423 7.97E-28 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS02845 0dbb0e6176fda4940ef1fc53567c3e21 425 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 425 32.76 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS02845 0dbb0e6176fda4940ef1fc53567c3e21 425 Pfam PF01979 Amidohydrolase family 225 420 1.3E-13 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RPIC12D_RS02845 0dbb0e6176fda4940ef1fc53567c3e21 425 PANTHER PTHR11647 1 423 2.5E-130 T 22-04-2016 RPIC12D_RS02845 0dbb0e6176fda4940ef1fc53567c3e21 425 Gene3D G3DSA:2.30.40.10 2 68 2.1E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS02845 0dbb0e6176fda4940ef1fc53567c3e21 425 SUPERFAMILY SSF51556 56 367 7.74E-89 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC12D_RS02845 0dbb0e6176fda4940ef1fc53567c3e21 425 Gene3D G3DSA:3.20.20.140 69 387 4.4E-88 T 22-04-2016 RPIC12D_RS02845 0dbb0e6176fda4940ef1fc53567c3e21 425 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 20 422 2.6E-96 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS02845 0dbb0e6176fda4940ef1fc53567c3e21 425 PANTHER PTHR11647:SF70 1 423 2.5E-130 T 22-04-2016 RPIC12D_RS14460 dbb3d6295b9626e351b44f58e188e46c 267 PANTHER PTHR30035:SF3 31 241 1.0E-63 T 22-04-2016 RPIC12D_RS14460 dbb3d6295b9626e351b44f58e188e46c 267 PRINTS PR01805 VacJ lipoprotein signature 105 122 8.3E-26 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RPIC12D_RS14460 dbb3d6295b9626e351b44f58e188e46c 267 PRINTS PR01805 VacJ lipoprotein signature 54 70 8.3E-26 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RPIC12D_RS14460 dbb3d6295b9626e351b44f58e188e46c 267 PRINTS PR01805 VacJ lipoprotein signature 37 50 8.3E-26 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RPIC12D_RS14460 dbb3d6295b9626e351b44f58e188e46c 267 PRINTS PR01805 VacJ lipoprotein signature 141 158 8.3E-26 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RPIC12D_RS14460 dbb3d6295b9626e351b44f58e188e46c 267 Pfam PF04333 MlaA lipoprotein 36 228 2.1E-79 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RPIC12D_RS14460 dbb3d6295b9626e351b44f58e188e46c 267 PANTHER PTHR30035 31 241 1.0E-63 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 SUPERFAMILY SSF52016 636 899 3.34E-80 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 Gene3D G3DSA:3.30.499.10 367 576 1.3E-63 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 PANTHER PTHR11670 668 713 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 PANTHER PTHR11670 758 901 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 PANTHER PTHR11670 1 391 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 PANTHER PTHR11670 417 651 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 Gene3D G3DSA:3.30.499.10 22 246 7.8E-77 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 ProSitePatterns PS00450 Aconitase family signature 1. 428 444 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 Gene3D G3DSA:3.40.1060.10 247 365 2.6E-35 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 19 899 0.0 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 Pfam PF00694 Aconitase C-terminal domain 693 825 9.2E-41 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 PANTHER PTHR11670:SF1 668 713 0.0 T 22-04-2016 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 PANTHER PTHR11670:SF1 758 901 0.0 T 22-04-2016 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 PANTHER PTHR11670:SF1 1 391 0.0 T 22-04-2016 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 PANTHER PTHR11670:SF1 417 651 0.0 T 22-04-2016 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 Pfam PF00330 Aconitase family (aconitate hydratase) 70 563 1.9E-178 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 ProSitePatterns PS01244 Aconitase family signature 2. 494 507 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 SUPERFAMILY SSF53732 16 626 4.97E-217 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 PRINTS PR00415 Aconitase family signature 147 160 4.1E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 PRINTS PR00415 Aconitase family signature 214 229 4.1E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 PRINTS PR00415 Aconitase family signature 276 289 4.1E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 PRINTS PR00415 Aconitase family signature 432 443 4.1E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 PRINTS PR00415 Aconitase family signature 494 507 4.1E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 PRINTS PR00415 Aconitase family signature 200 213 4.1E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 PRINTS PR00415 Aconitase family signature 290 303 4.1E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 PRINTS PR00415 Aconitase family signature 370 384 4.1E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 PRINTS PR00415 Aconitase family signature 171 179 4.1E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS09230 b58ee97c97ef9c85fa0774c82a4c8fbd 901 Gene3D G3DSA:3.20.19.10 637 899 4.7E-79 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RPIC12D_RS02220 142f1a0324aaef23fdba9cbc1ebce6d4 222 ProSitePatterns PS01081 TetR-type HTH domain signature. 46 77 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RPIC12D_RS02220 142f1a0324aaef23fdba9cbc1ebce6d4 222 Gene3D G3DSA:1.10.357.10 6 217 3.9E-27 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC12D_RS02220 142f1a0324aaef23fdba9cbc1ebce6d4 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 79 6.9E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS02220 142f1a0324aaef23fdba9cbc1ebce6d4 222 SUPERFAMILY SSF46689 24 103 7.7E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS02220 142f1a0324aaef23fdba9cbc1ebce6d4 222 PANTHER PTHR30055 17 219 3.2E-18 T 22-04-2016 RPIC12D_RS13300 5565f8ef8d12a72693302da67b7d8d53 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.0E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS13300 5565f8ef8d12a72693302da67b7d8d53 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.0E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS13300 5565f8ef8d12a72693302da67b7d8d53 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.0E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS13300 5565f8ef8d12a72693302da67b7d8d53 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS13300 5565f8ef8d12a72693302da67b7d8d53 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 3.0E-17 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS13300 5565f8ef8d12a72693302da67b7d8d53 86 Gene3D G3DSA:2.40.50.100 20 81 5.8E-29 T 22-04-2016 RPIC12D_RS13300 5565f8ef8d12a72693302da67b7d8d53 86 SUPERFAMILY SSF110324 2 80 6.63E-32 T 22-04-2016 RPIC12D_RS13300 5565f8ef8d12a72693302da67b7d8d53 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 9.3E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS13300 5565f8ef8d12a72693302da67b7d8d53 86 Pfam PF01016 Ribosomal L27 protein 2 82 9.1E-36 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS13300 5565f8ef8d12a72693302da67b7d8d53 86 PANTHER PTHR15893 1 86 2.2E-43 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS13300 5565f8ef8d12a72693302da67b7d8d53 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.214 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS10090 a0e555069ff878eab026bcf61441eb17 198 PANTHER PTHR35446 2 198 1.8E-97 T 22-04-2016 RPIC12D_RS10090 a0e555069ff878eab026bcf61441eb17 198 PANTHER PTHR35446:SF2 2 198 1.8E-97 T 22-04-2016 RPIC12D_RS10090 a0e555069ff878eab026bcf61441eb17 198 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 67 99 8.2E-12 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS10090 a0e555069ff878eab026bcf61441eb17 198 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 9 186 1.7E-75 T 22-04-2016 IPR010195 Uncharacterised peroxidase-related RPIC12D_RS10090 a0e555069ff878eab026bcf61441eb17 198 Gene3D G3DSA:1.20.5.810 15 66 2.4E-30 T 22-04-2016 RPIC12D_RS10090 a0e555069ff878eab026bcf61441eb17 198 Gene3D G3DSA:1.20.1290.10 68 188 1.3E-38 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS10090 a0e555069ff878eab026bcf61441eb17 198 Pfam PF02627 Carboxymuconolactone decarboxylase family 48 100 7.5E-12 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS10090 a0e555069ff878eab026bcf61441eb17 198 SUPERFAMILY SSF69118 7 194 1.57E-59 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS14410 b1db5bce191046e57536cb8f1446e0d4 196 SUPERFAMILY SSF54211 89 179 3.29E-34 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS14410 b1db5bce191046e57536cb8f1446e0d4 196 Gene3D G3DSA:3.30.230.40 91 196 4.5E-30 T 22-04-2016 RPIC12D_RS14410 b1db5bce191046e57536cb8f1446e0d4 196 PANTHER PTHR23133 1 196 4.7E-104 T 22-04-2016 RPIC12D_RS14410 b1db5bce191046e57536cb8f1446e0d4 196 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 157 169 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RPIC12D_RS14410 b1db5bce191046e57536cb8f1446e0d4 196 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 175 3.0E-63 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RPIC12D_RS14410 b1db5bce191046e57536cb8f1446e0d4 196 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RPIC12D_RS14410 b1db5bce191046e57536cb8f1446e0d4 196 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 196 43.375 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RPIC12D_RS14410 b1db5bce191046e57536cb8f1446e0d4 196 SUPERFAMILY SSF54211 3 87 7.08E-34 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS14410 b1db5bce191046e57536cb8f1446e0d4 196 PANTHER PTHR23133:SF2 1 196 4.7E-104 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RPIC12D_RS14410 b1db5bce191046e57536cb8f1446e0d4 196 Gene3D G3DSA:3.30.230.40 2 89 8.4E-39 T 22-04-2016 RPIC12D_RS06220 8f5fd8bd605e9a1ee1d1881ef0d45d68 103 SUPERFAMILY SSF51182 35 101 1.54E-14 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS06220 8f5fd8bd605e9a1ee1d1881ef0d45d68 103 Gene3D G3DSA:2.60.120.10 19 101 1.3E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS05710 92cc87a0e03cf2556a7827d0da62c344 270 Pfam PF00005 ABC transporter 29 167 9.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS05710 92cc87a0e03cf2556a7827d0da62c344 270 PANTHER PTHR24220:SF561 7 216 9.4E-96 T 22-04-2016 RPIC12D_RS05710 92cc87a0e03cf2556a7827d0da62c344 270 SUPERFAMILY SSF52540 22 220 1.24E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05710 92cc87a0e03cf2556a7827d0da62c344 270 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS05710 92cc87a0e03cf2556a7827d0da62c344 270 SMART SM00382 37 217 3.6E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS05710 92cc87a0e03cf2556a7827d0da62c344 270 PANTHER PTHR24220 7 216 9.4E-96 T 22-04-2016 RPIC12D_RS05710 92cc87a0e03cf2556a7827d0da62c344 270 Gene3D G3DSA:3.40.50.300 2 216 8.7E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05410 13cf36da30d3c9303b8cf8118d2c00c6 207 Pfam PF01300 Telomere recombination 22 198 8.7E-44 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 RPIC12D_RS05410 13cf36da30d3c9303b8cf8118d2c00c6 207 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 4.7E-58 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 RPIC12D_RS05410 13cf36da30d3c9303b8cf8118d2c00c6 207 SUPERFAMILY SSF55821 1 202 1.16E-60 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RPIC12D_RS05410 13cf36da30d3c9303b8cf8118d2c00c6 207 Gene3D G3DSA:3.90.870.10 2 202 2.2E-60 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RPIC12D_RS05410 13cf36da30d3c9303b8cf8118d2c00c6 207 PANTHER PTHR17490 1 201 1.8E-84 T 22-04-2016 RPIC12D_RS05410 13cf36da30d3c9303b8cf8118d2c00c6 207 PANTHER PTHR17490:SF7 1 201 1.8E-84 T 22-04-2016 RPIC12D_RS09620 1296d339bfbbff3eb4119a9a1ec7cf21 338 PANTHER PTHR37946 96 266 9.4E-14 T 22-04-2016 RPIC12D_RS09620 1296d339bfbbff3eb4119a9a1ec7cf21 338 Gene3D G3DSA:3.40.50.1820 140 328 1.0E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS09620 1296d339bfbbff3eb4119a9a1ec7cf21 338 SUPERFAMILY SSF53474 138 323 1.1E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS09620 1296d339bfbbff3eb4119a9a1ec7cf21 338 Pfam PF12146 Serine aminopeptidase, S33 181 262 5.5E-7 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 RPIC12D_RS05310 edccd6469b5a79031969a024ac344f2c 839 Pfam PF13567 Domain of unknown function (DUF4131) 9 194 1.9E-29 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 RPIC12D_RS05310 edccd6469b5a79031969a024ac344f2c 839 SUPERFAMILY SSF56281 554 819 9.83E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS05310 edccd6469b5a79031969a024ac344f2c 839 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 261 460 4.2E-23 T 22-04-2016 IPR004477 ComEC/Rec2-related protein RPIC12D_RS05310 edccd6469b5a79031969a024ac344f2c 839 Gene3D G3DSA:3.60.15.10 552 813 1.6E-32 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS05310 edccd6469b5a79031969a024ac344f2c 839 Pfam PF03772 Competence protein 240 525 1.2E-60 T 22-04-2016 IPR004477 ComEC/Rec2-related protein RPIC12D_RS05310 edccd6469b5a79031969a024ac344f2c 839 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 152 795 3.2E-105 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 RPIC12D_RS05310 edccd6469b5a79031969a024ac344f2c 839 PANTHER PTHR30619 142 839 6.8E-164 T 22-04-2016 RPIC12D_RS05310 edccd6469b5a79031969a024ac344f2c 839 PANTHER PTHR30619 1 124 6.8E-164 T 22-04-2016 RPIC12D_RS05310 edccd6469b5a79031969a024ac344f2c 839 Pfam PF00753 Metallo-beta-lactamase superfamily 565 761 3.0E-7 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS05310 edccd6469b5a79031969a024ac344f2c 839 PANTHER PTHR30619:SF2 142 839 6.8E-164 T 22-04-2016 RPIC12D_RS05310 edccd6469b5a79031969a024ac344f2c 839 PANTHER PTHR30619:SF2 1 124 6.8E-164 T 22-04-2016 RPIC12D_RS08385 e46f15c905e224a10b67a79ce9590ba5 130 Pfam PF09842 Predicted membrane protein (DUF2069) 18 118 4.1E-35 T 22-04-2016 IPR018643 Protein of unknown function DUF2069, membrane RPIC12D_RS07930 aeb7e240dc223383f731b40cb207b4a6 353 PANTHER PTHR30547 12 350 4.8E-143 T 22-04-2016 RPIC12D_RS07930 aeb7e240dc223383f731b40cb207b4a6 353 PANTHER PTHR30547:SF0 12 350 4.8E-143 T 22-04-2016 RPIC12D_RS07930 aeb7e240dc223383f731b40cb207b4a6 353 Pfam PF06250 Protein of unknown function (DUF1016) 29 340 7.7E-116 T 22-04-2016 IPR009362 Protein of unknown function DUF1016 RPIC12D_RS12695 7d9a0b64678450ea9d8731c8cfa08669 547 Pfam PF01566 Natural resistance-associated macrophage protein 71 425 3.9E-85 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RPIC12D_RS04980 aabb16be6394c0671e025cf57f8be0f3 263 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 12 244 5.3E-100 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RPIC12D_RS04980 aabb16be6394c0671e025cf57f8be0f3 263 PANTHER PTHR30456:SF0 8 251 2.3E-132 T 22-04-2016 RPIC12D_RS04980 aabb16be6394c0671e025cf57f8be0f3 263 PANTHER PTHR30456 8 251 2.3E-132 T 22-04-2016 RPIC12D_RS04980 aabb16be6394c0671e025cf57f8be0f3 263 SUPERFAMILY SSF63892 10 246 4.05E-96 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RPIC12D_RS04980 aabb16be6394c0671e025cf57f8be0f3 263 Gene3D G3DSA:3.20.20.70 10 247 5.9E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS04980 aabb16be6394c0671e025cf57f8be0f3 263 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 249 124.204 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RPIC12D_RS04980 aabb16be6394c0671e025cf57f8be0f3 263 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 12 244 3.9E-93 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RPIC12D_RS06070 eb8aac3395d520ad78edbddec540beaa 594 Pfam PF01479 S4 domain 215 256 5.6E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS06070 eb8aac3395d520ad78edbddec540beaa 594 PANTHER PTHR21600:SF2 214 448 1.3E-73 T 22-04-2016 RPIC12D_RS06070 eb8aac3395d520ad78edbddec540beaa 594 Pfam PF00849 RNA pseudouridylate synthase 276 409 1.2E-13 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS06070 eb8aac3395d520ad78edbddec540beaa 594 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 280 440 3.2E-47 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RPIC12D_RS06070 eb8aac3395d520ad78edbddec540beaa 594 Gene3D G3DSA:3.10.290.10 215 268 3.1E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS06070 eb8aac3395d520ad78edbddec540beaa 594 SUPERFAMILY SSF55120 274 444 8.0E-40 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC12D_RS06070 eb8aac3395d520ad78edbddec540beaa 594 PANTHER PTHR21600 214 448 1.3E-73 T 22-04-2016 RPIC12D_RS06070 eb8aac3395d520ad78edbddec540beaa 594 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 314 328 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RPIC12D_RS06070 eb8aac3395d520ad78edbddec540beaa 594 SUPERFAMILY SSF55174 215 305 5.0E-13 T 22-04-2016 RPIC12D_RS06070 eb8aac3395d520ad78edbddec540beaa 594 SMART SM00363 213 270 1.4E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS05970 357e46b7dbb73a8f82755a99f518046d 282 PANTHER PTHR32243:SF31 1 280 2.7E-126 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 RPIC12D_RS05970 357e46b7dbb73a8f82755a99f518046d 282 Gene3D G3DSA:1.10.3720.10 4 271 6.0E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS05970 357e46b7dbb73a8f82755a99f518046d 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 277 1.3E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS05970 357e46b7dbb73a8f82755a99f518046d 282 SUPERFAMILY SSF161098 4 278 7.2E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS05970 357e46b7dbb73a8f82755a99f518046d 282 PANTHER PTHR32243 1 280 2.7E-126 T 22-04-2016 RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 469 3.5E-149 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 SUPERFAMILY SSF52935 321 469 1.11E-34 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 Gene3D G3DSA:3.40.1380.20 324 467 1.3E-39 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 467 2.6E-26 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 PANTHER PTHR11817 2 470 2.2E-198 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 Pfam PF00224 Pyruvate kinase, barrel domain 5 334 1.2E-112 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 SUPERFAMILY SSF50800 73 167 4.88E-25 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 SUPERFAMILY SSF51621 2 78 2.44E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 SUPERFAMILY SSF51621 168 341 2.44E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 PRINTS PR01050 Pyruvate kinase family signature 291 309 1.1E-61 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 PRINTS PR01050 Pyruvate kinase family signature 187 201 1.1E-61 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 PRINTS PR01050 Pyruvate kinase family signature 310 326 1.1E-61 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 PRINTS PR01050 Pyruvate kinase family signature 62 78 1.1E-61 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 PRINTS PR01050 Pyruvate kinase family signature 241 265 1.1E-61 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 PRINTS PR01050 Pyruvate kinase family signature 214 240 1.1E-61 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 PRINTS PR01050 Pyruvate kinase family signature 266 290 1.1E-61 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 Gene3D G3DSA:3.20.20.60 170 323 4.3E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 Gene3D G3DSA:3.20.20.60 5 75 4.3E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS15810 a43c1b9e85cc4d406e0142472e290e8a 492 Gene3D G3DSA:2.40.33.10 76 169 3.9E-27 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC12D_RS02730 86fd891f0b108bc5361577b01b3de606 603 Pfam PF13629 Pilus formation protein N terminal region 95 163 2.7E-18 T 22-04-2016 IPR032789 Pilus formation protein, N-terminal RPIC12D_RS02730 86fd891f0b108bc5361577b01b3de606 603 PANTHER PTHR30332 259 564 1.0E-57 T 22-04-2016 RPIC12D_RS02730 86fd891f0b108bc5361577b01b3de606 603 Pfam PF00263 Bacterial type II and III secretion system protein 328 497 2.9E-41 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 RPIC12D_RS02730 86fd891f0b108bc5361577b01b3de606 603 PRINTS PR00811 Bacterial general secretion pathway protein D signature 263 273 2.8E-11 T 22-04-2016 IPR001775 GspD/PilQ family RPIC12D_RS02730 86fd891f0b108bc5361577b01b3de606 603 PRINTS PR00811 Bacterial general secretion pathway protein D signature 484 498 2.8E-11 T 22-04-2016 IPR001775 GspD/PilQ family RPIC12D_RS02730 86fd891f0b108bc5361577b01b3de606 603 PRINTS PR00811 Bacterial general secretion pathway protein D signature 461 479 2.8E-11 T 22-04-2016 IPR001775 GspD/PilQ family RPIC12D_RS02730 86fd891f0b108bc5361577b01b3de606 603 PRINTS PR00811 Bacterial general secretion pathway protein D signature 322 346 2.8E-11 T 22-04-2016 IPR001775 GspD/PilQ family RPIC12D_RS02730 86fd891f0b108bc5361577b01b3de606 603 PRINTS PR00811 Bacterial general secretion pathway protein D signature 359 369 2.8E-11 T 22-04-2016 IPR001775 GspD/PilQ family RPIC12D_RS00125 cf934e25d28f351d37d9860f25a417da 204 PANTHER PTHR11260 1 199 2.0E-70 T 22-04-2016 RPIC12D_RS00125 cf934e25d28f351d37d9860f25a417da 204 Gene3D G3DSA:3.40.30.10 1 73 1.0E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS00125 cf934e25d28f351d37d9860f25a417da 204 PANTHER PTHR11260:SF325 1 199 2.0E-70 T 22-04-2016 RPIC12D_RS00125 cf934e25d28f351d37d9860f25a417da 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 5.2E-21 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC12D_RS00125 cf934e25d28f351d37d9860f25a417da 204 SUPERFAMILY SSF47616 75 198 4.84E-6 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS00125 cf934e25d28f351d37d9860f25a417da 204 SUPERFAMILY SSF52833 1 86 3.07E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS13775 c66029f1ecce8d383ee5e5ca19704084 262 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 6 262 7.9E-139 T 22-04-2016 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18|UniPathway: UPA00930 RPIC12D_RS13775 c66029f1ecce8d383ee5e5ca19704084 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RPIC12D_RS13775 c66029f1ecce8d383ee5e5ca19704084 262 PANTHER PTHR11941:SF76 5 259 3.7E-96 T 22-04-2016 RPIC12D_RS13775 c66029f1ecce8d383ee5e5ca19704084 262 Gene3D G3DSA:3.90.226.10 1 259 3.1E-81 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS13775 c66029f1ecce8d383ee5e5ca19704084 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 261 2.6E-65 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC12D_RS13775 c66029f1ecce8d383ee5e5ca19704084 262 SUPERFAMILY SSF52096 3 261 1.26E-78 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS13775 c66029f1ecce8d383ee5e5ca19704084 262 PANTHER PTHR11941 5 259 3.7E-96 T 22-04-2016 RPIC12D_RS09695 364672d48571b42b7d45bb3c611c61c9 345 SUPERFAMILY SSF51556 10 343 3.57E-87 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC12D_RS09695 364672d48571b42b7d45bb3c611c61c9 345 PANTHER PTHR11409 15 342 6.7E-157 T 22-04-2016 RPIC12D_RS09695 364672d48571b42b7d45bb3c611c61c9 345 Gene3D G3DSA:3.20.20.140 13 341 5.7E-104 T 22-04-2016 RPIC12D_RS09695 364672d48571b42b7d45bb3c611c61c9 345 PANTHER PTHR11409:SF41 15 342 6.7E-157 T 22-04-2016 RPIC12D_RS09695 364672d48571b42b7d45bb3c611c61c9 345 Pfam PF00962 Adenosine/AMP deaminase 14 334 1.7E-72 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 RPIC12D_RS09695 364672d48571b42b7d45bb3c611c61c9 345 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 15 337 3.2E-114 T 22-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 RPIC12D_RS09695 364672d48571b42b7d45bb3c611c61c9 345 Hamap MF_01962 Adenine deaminase. 10 326 84.28 T 22-04-2016 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 RPIC12D_RS00865 97050ade3d000922e8329137b275f98d 374 PANTHER PTHR30188 27 373 4.2E-84 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RPIC12D_RS00865 97050ade3d000922e8329137b275f98d 374 Pfam PF02405 Permease MlaE 159 367 3.9E-66 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RPIC12D_RS00865 97050ade3d000922e8329137b275f98d 374 PANTHER PTHR30188:SF3 27 373 4.2E-84 T 22-04-2016 RPIC12D_RS00865 97050ade3d000922e8329137b275f98d 374 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 133 370 3.8E-64 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RPIC12D_RS10875 a546c76414340d83f2c06f3ece477c64 444 Gene3D G3DSA:1.20.1250.20 29 233 2.4E-45 T 22-04-2016 RPIC12D_RS10875 a546c76414340d83f2c06f3ece477c64 444 PANTHER PTHR11662 19 435 1.0E-161 T 22-04-2016 RPIC12D_RS10875 a546c76414340d83f2c06f3ece477c64 444 PANTHER PTHR11662:SF3 19 435 1.0E-161 T 22-04-2016 RPIC12D_RS10875 a546c76414340d83f2c06f3ece477c64 444 Pfam PF07690 Major Facilitator Superfamily 41 403 4.1E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS10875 a546c76414340d83f2c06f3ece477c64 444 Gene3D G3DSA:1.20.1250.20 252 435 2.6E-21 T 22-04-2016 RPIC12D_RS10875 a546c76414340d83f2c06f3ece477c64 444 SUPERFAMILY SSF103473 23 440 6.54E-83 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS07525 282b946a51934f2456ec31607bf378ea 90 Gene3D G3DSA:3.30.70.1500 4 85 7.5E-28 T 22-04-2016 RPIC12D_RS07525 282b946a51934f2456ec31607bf378ea 90 SUPERFAMILY SSF82657 5 88 6.41E-27 T 22-04-2016 IPR002634 BolA protein RPIC12D_RS07525 282b946a51934f2456ec31607bf378ea 90 PANTHER PTHR12735:SF24 7 89 1.4E-28 T 22-04-2016 RPIC12D_RS07525 282b946a51934f2456ec31607bf378ea 90 Pfam PF01722 BolA-like protein 12 88 7.4E-29 T 22-04-2016 IPR002634 BolA protein RPIC12D_RS07525 282b946a51934f2456ec31607bf378ea 90 PANTHER PTHR12735 7 89 1.4E-28 T 22-04-2016 RPIC12D_RS07525 282b946a51934f2456ec31607bf378ea 90 PIRSF PIRSF003113 1 90 7.5E-27 T 22-04-2016 IPR002634 BolA protein RPIC12D_RS06630 90f5372b93eeb50347fa52a34ff40ac5 307 PANTHER PTHR30465 1 305 2.5E-179 T 22-04-2016 RPIC12D_RS06630 90f5372b93eeb50347fa52a34ff40ac5 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 7.8E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS06630 90f5372b93eeb50347fa52a34ff40ac5 307 PANTHER PTHR30465:SF59 1 305 2.5E-179 T 22-04-2016 RPIC12D_RS06630 90f5372b93eeb50347fa52a34ff40ac5 307 Gene3D G3DSA:1.10.3720.10 86 299 2.8E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS06630 90f5372b93eeb50347fa52a34ff40ac5 307 SUPERFAMILY SSF161098 90 288 1.7E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS12370 dbd2ef2a9fdf71e87c61018cb98ecc80 132 Pfam PF01479 S4 domain 11 57 5.8E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS12370 dbd2ef2a9fdf71e87c61018cb98ecc80 132 SUPERFAMILY SSF55174 10 106 3.53E-27 T 22-04-2016 RPIC12D_RS12370 dbd2ef2a9fdf71e87c61018cb98ecc80 132 Gene3D G3DSA:3.10.290.10 9 109 1.1E-33 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS12370 dbd2ef2a9fdf71e87c61018cb98ecc80 132 SMART SM00363 11 77 7.3E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC12D_RS12370 dbd2ef2a9fdf71e87c61018cb98ecc80 132 PIRSF PIRSF016821 8 132 4.7E-41 T 22-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 RPIC12D_RS09085 a2db8964f3588ae6196e322566826bd6 320 PANTHER PTHR24220 278 316 3.8E-107 T 22-04-2016 RPIC12D_RS09085 a2db8964f3588ae6196e322566826bd6 320 PANTHER PTHR24220 17 252 3.8E-107 T 22-04-2016 RPIC12D_RS09085 a2db8964f3588ae6196e322566826bd6 320 SMART SM00382 40 223 6.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS09085 a2db8964f3588ae6196e322566826bd6 320 PANTHER PTHR24220:SF165 278 316 3.8E-107 T 22-04-2016 RPIC12D_RS09085 a2db8964f3588ae6196e322566826bd6 320 PANTHER PTHR24220:SF165 17 252 3.8E-107 T 22-04-2016 RPIC12D_RS09085 a2db8964f3588ae6196e322566826bd6 320 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS09085 a2db8964f3588ae6196e322566826bd6 320 Gene3D G3DSA:3.40.50.300 11 238 1.7E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09085 a2db8964f3588ae6196e322566826bd6 320 Pfam PF00005 ABC transporter 31 174 3.2E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS09085 a2db8964f3588ae6196e322566826bd6 320 SUPERFAMILY SSF52540 14 236 5.64E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09085 a2db8964f3588ae6196e322566826bd6 320 TIGRFAM TIGR01288 nodI: nodulation ABC transporter NodI 17 320 7.8E-143 T 22-04-2016 IPR005978 Nodulation ABC transporter, NodI GO:0005215|GO:0005524|GO:0006810|GO:0009877|GO:0016020 RPIC12D_RS16960 03362271e689b0787f40fb4fbc60c9bc 435 SMART SM00833 260 384 8.1E-52 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RPIC12D_RS16960 03362271e689b0787f40fb4fbc60c9bc 435 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 260 384 8.4E-29 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RPIC12D_RS16960 03362271e689b0787f40fb4fbc60c9bc 435 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 214 2.3E-58 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RPIC12D_RS16960 03362271e689b0787f40fb4fbc60c9bc 435 Gene3D G3DSA:3.40.50.300 3 233 3.2E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16960 03362271e689b0787f40fb4fbc60c9bc 435 SUPERFAMILY SSF52540 3 303 9.74E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16960 03362271e689b0787f40fb4fbc60c9bc 435 PANTHER PTHR13748 1 337 1.1E-187 T 22-04-2016 RPIC12D_RS16960 03362271e689b0787f40fb4fbc60c9bc 435 PANTHER PTHR13748 358 398 1.1E-187 T 22-04-2016 RPIC12D_RS16960 03362271e689b0787f40fb4fbc60c9bc 435 Gene3D G3DSA:3.30.1220.10 248 384 1.4E-16 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RPIC12D_RS16960 03362271e689b0787f40fb4fbc60c9bc 435 PANTHER PTHR13748:SF4 1 337 1.1E-187 T 22-04-2016 RPIC12D_RS16960 03362271e689b0787f40fb4fbc60c9bc 435 PANTHER PTHR13748:SF4 358 398 1.1E-187 T 22-04-2016 RPIC12D_RS12850 364f01971e300fc82187d8fd32b34d5d 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 349 8.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS12850 364f01971e300fc82187d8fd32b34d5d 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 314 8.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS12850 364f01971e300fc82187d8fd32b34d5d 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 368 8.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS12850 364f01971e300fc82187d8fd32b34d5d 368 SMART SM00448 8 121 7.7E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS12850 364f01971e300fc82187d8fd32b34d5d 368 SMART SM00388 140 213 9.1E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS12850 364f01971e300fc82187d8fd32b34d5d 368 Pfam PF00072 Response regulator receiver domain 10 120 2.3E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS12850 364f01971e300fc82187d8fd32b34d5d 368 Pfam PF00512 His Kinase A (phospho-acceptor) domain 143 206 8.2E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS12850 364f01971e300fc82187d8fd32b34d5d 368 Gene3D G3DSA:3.40.50.2300 9 129 1.7E-24 T 22-04-2016 RPIC12D_RS12850 364f01971e300fc82187d8fd32b34d5d 368 SUPERFAMILY SSF52172 7 130 9.25E-25 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS12850 364f01971e300fc82187d8fd32b34d5d 368 SMART SM00387 257 368 7.7E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS12850 364f01971e300fc82187d8fd32b34d5d 368 PANTHER PTHR24423 113 368 1.0E-23 T 22-04-2016 RPIC12D_RS12850 364f01971e300fc82187d8fd32b34d5d 368 PANTHER PTHR24423 39 64 1.0E-23 T 22-04-2016 RPIC12D_RS12850 364f01971e300fc82187d8fd32b34d5d 368 Gene3D G3DSA:1.10.287.130 141 197 1.5E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS12850 364f01971e300fc82187d8fd32b34d5d 368 Gene3D G3DSA:3.30.565.10 198 368 1.5E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS12850 364f01971e300fc82187d8fd32b34d5d 368 SUPERFAMILY SSF47384 134 211 6.08E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS12850 364f01971e300fc82187d8fd32b34d5d 368 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 264 368 7.5E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS12850 364f01971e300fc82187d8fd32b34d5d 368 SUPERFAMILY SSF55874 222 368 1.13E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS04970 14efa24deb5a0a0559dc1e7b315b4036 312 PANTHER PTHR11649 15 312 3.6E-105 T 22-04-2016 RPIC12D_RS04970 14efa24deb5a0a0559dc1e7b315b4036 312 Pfam PF07650 KH domain 224 299 4.6E-16 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 RPIC12D_RS04970 14efa24deb5a0a0559dc1e7b315b4036 312 Gene3D G3DSA:3.40.50.300 23 207 2.9E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04970 14efa24deb5a0a0559dc1e7b315b4036 312 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 92 110 2.5E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS04970 14efa24deb5a0a0559dc1e7b315b4036 312 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 24 44 2.5E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS04970 14efa24deb5a0a0559dc1e7b315b4036 312 TIGRFAM TIGR00436 era: GTP-binding protein Era 22 294 3.1E-81 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 RPIC12D_RS04970 14efa24deb5a0a0559dc1e7b315b4036 312 Hamap MF_00367 GTPase Era [era]. 19 311 34.619 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 RPIC12D_RS04970 14efa24deb5a0a0559dc1e7b315b4036 312 Pfam PF01926 50S ribosome-binding GTPase 24 137 2.0E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS04970 14efa24deb5a0a0559dc1e7b315b4036 312 SUPERFAMILY SSF52540 24 221 9.64E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04970 14efa24deb5a0a0559dc1e7b315b4036 312 Gene3D G3DSA:3.30.300.20 208 307 1.5E-35 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RPIC12D_RS04970 14efa24deb5a0a0559dc1e7b315b4036 312 PANTHER PTHR11649:SF3 15 312 3.6E-105 T 22-04-2016 RPIC12D_RS04970 14efa24deb5a0a0559dc1e7b315b4036 312 SUPERFAMILY SSF54814 198 312 7.19E-38 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RPIC12D_RS04970 14efa24deb5a0a0559dc1e7b315b4036 312 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 22 185 1.0E-26 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC12D_RS09630 51b3177234918fe709d5e2865390a4bb 350 Gene3D G3DSA:3.40.50.2000 175 293 4.0E-15 T 22-04-2016 RPIC12D_RS09630 51b3177234918fe709d5e2865390a4bb 350 Pfam PF13439 Glycosyltransferase Family 4 14 165 5.7E-19 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RPIC12D_RS09630 51b3177234918fe709d5e2865390a4bb 350 PANTHER PTHR12526 2 324 1.8E-71 T 22-04-2016 RPIC12D_RS09630 51b3177234918fe709d5e2865390a4bb 350 Pfam PF13692 Glycosyl transferases group 1 180 292 2.0E-15 T 22-04-2016 RPIC12D_RS09630 51b3177234918fe709d5e2865390a4bb 350 PANTHER PTHR12526:SF363 2 324 1.8E-71 T 22-04-2016 RPIC12D_RS09630 51b3177234918fe709d5e2865390a4bb 350 SUPERFAMILY SSF53756 2 329 6.8E-61 T 22-04-2016 RPIC12D_RS05850 3a81e644ed847e6ffaeea43eef3b1a55 190 Pfam PF00156 Phosphoribosyl transferase domain 16 160 1.9E-25 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIC12D_RS05850 3a81e644ed847e6ffaeea43eef3b1a55 190 SUPERFAMILY SSF53271 5 177 7.24E-36 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS05850 3a81e644ed847e6ffaeea43eef3b1a55 190 Gene3D G3DSA:3.40.50.2020 9 167 1.9E-36 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS04490 8cdce0ee188faf4263f03e8a348b1787 636 PANTHER PTHR19211:SF45 1 571 2.5E-223 T 22-04-2016 RPIC12D_RS04490 8cdce0ee188faf4263f03e8a348b1787 636 Gene3D G3DSA:3.40.50.300 322 555 9.3E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04490 8cdce0ee188faf4263f03e8a348b1787 636 Gene3D G3DSA:3.40.50.300 6 103 2.4E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04490 8cdce0ee188faf4263f03e8a348b1787 636 Gene3D G3DSA:3.40.50.300 136 280 2.4E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04490 8cdce0ee188faf4263f03e8a348b1787 636 PANTHER PTHR19211 1 571 2.5E-223 T 22-04-2016 RPIC12D_RS04490 8cdce0ee188faf4263f03e8a348b1787 636 SUPERFAMILY SSF52540 314 515 7.53E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04490 8cdce0ee188faf4263f03e8a348b1787 636 Pfam PF12848 ABC transporter 224 299 1.8E-10 T 22-04-2016 IPR032781 ABC-transporter extension domain RPIC12D_RS04490 8cdce0ee188faf4263f03e8a348b1787 636 Pfam PF00005 ABC transporter 19 185 9.0E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS04490 8cdce0ee188faf4263f03e8a348b1787 636 Pfam PF00005 ABC transporter 336 469 6.6E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS04490 8cdce0ee188faf4263f03e8a348b1787 636 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS04490 8cdce0ee188faf4263f03e8a348b1787 636 Pfam PF16326 ABC transporter C-terminal domain 561 630 3.1E-20 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 RPIC12D_RS04490 8cdce0ee188faf4263f03e8a348b1787 636 SUPERFAMILY SSF52540 11 234 6.35E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04490 8cdce0ee188faf4263f03e8a348b1787 636 SMART SM00382 28 230 2.7E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS04490 8cdce0ee188faf4263f03e8a348b1787 636 SMART SM00382 344 514 2.6E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS01615 ab78dbd7f2143bc1871de02b61bb0d38 193 SMART SM00671 104 140 0.014 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS01615 ab78dbd7f2143bc1871de02b61bb0d38 193 SMART SM00671 68 103 1.3E-8 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS01615 ab78dbd7f2143bc1871de02b61bb0d38 193 Gene3D G3DSA:1.25.40.10 63 148 7.5E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS01615 ab78dbd7f2143bc1871de02b61bb0d38 193 SUPERFAMILY SSF81901 65 150 2.62E-14 T 22-04-2016 RPIC12D_RS01615 ab78dbd7f2143bc1871de02b61bb0d38 193 Pfam PF08238 Sel1 repeat 106 140 7.0E-4 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS01615 ab78dbd7f2143bc1871de02b61bb0d38 193 Pfam PF08238 Sel1 repeat 68 103 4.4E-8 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS01615 ab78dbd7f2143bc1871de02b61bb0d38 193 PANTHER PTHR11102 68 143 1.3E-12 T 22-04-2016 RPIC12D_RS07685 afff8af8eb4578b4464bc1d51f8e2c24 230 Pfam PF00717 Peptidase S24-like 37 116 7.6E-20 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B RPIC12D_RS07685 afff8af8eb4578b4464bc1d51f8e2c24 230 PANTHER PTHR12383:SF27 17 215 5.2E-54 T 22-04-2016 RPIC12D_RS07685 afff8af8eb4578b4464bc1d51f8e2c24 230 ProSitePatterns PS00761 Signal peptidases I signature 3. 177 190 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 RPIC12D_RS07685 afff8af8eb4578b4464bc1d51f8e2c24 230 ProSitePatterns PS00760 Signal peptidases I lysine active site. 95 107 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 RPIC12D_RS07685 afff8af8eb4578b4464bc1d51f8e2c24 230 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 93 105 6.6E-18 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC12D_RS07685 afff8af8eb4578b4464bc1d51f8e2c24 230 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 172 191 6.6E-18 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC12D_RS07685 afff8af8eb4578b4464bc1d51f8e2c24 230 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 30 46 6.6E-18 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC12D_RS07685 afff8af8eb4578b4464bc1d51f8e2c24 230 SUPERFAMILY SSF51306 28 226 1.38E-58 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RPIC12D_RS07685 afff8af8eb4578b4464bc1d51f8e2c24 230 ProSitePatterns PS00501 Signal peptidases I serine active site. 39 46 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 RPIC12D_RS07685 afff8af8eb4578b4464bc1d51f8e2c24 230 Pfam PF10502 Signal peptidase, peptidase S26 169 208 1.5E-6 T 22-04-2016 IPR019533 Peptidase S26 RPIC12D_RS07685 afff8af8eb4578b4464bc1d51f8e2c24 230 Gene3D G3DSA:2.10.109.10 27 103 3.5E-44 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RPIC12D_RS07685 afff8af8eb4578b4464bc1d51f8e2c24 230 Gene3D G3DSA:2.10.109.10 172 216 3.5E-44 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RPIC12D_RS07685 afff8af8eb4578b4464bc1d51f8e2c24 230 PANTHER PTHR12383 17 215 5.2E-54 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC12D_RS07685 afff8af8eb4578b4464bc1d51f8e2c24 230 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 17 212 8.2E-46 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC12D_RS13035 7ea60d6e523fd18dd5c6438bcace2c83 781 PANTHER PTHR23406:SF23 53 463 3.0E-162 T 22-04-2016 RPIC12D_RS13035 7ea60d6e523fd18dd5c6438bcace2c83 781 Pfam PF03949 Malic enzyme, NAD binding domain 186 380 1.0E-22 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RPIC12D_RS13035 7ea60d6e523fd18dd5c6438bcace2c83 781 Gene3D G3DSA:3.40.50.10750 601 747 7.2E-53 T 22-04-2016 RPIC12D_RS13035 7ea60d6e523fd18dd5c6438bcace2c83 781 Pfam PF12434 Malate dehydrogenase enzyme 5 37 6.6E-18 T 22-04-2016 IPR032683 Malate dehydrogenase enzyme, N-terminal RPIC12D_RS13035 7ea60d6e523fd18dd5c6438bcace2c83 781 PIRSF PIRSF036684 19 780 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 RPIC12D_RS13035 7ea60d6e523fd18dd5c6438bcace2c83 781 Pfam PF00390 Malic enzyme, N-terminal domain 40 135 2.0E-21 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RPIC12D_RS13035 7ea60d6e523fd18dd5c6438bcace2c83 781 Gene3D G3DSA:3.40.50.10380 31 181 1.9E-50 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RPIC12D_RS13035 7ea60d6e523fd18dd5c6438bcace2c83 781 SUPERFAMILY SSF53659 450 775 2.14E-92 T 22-04-2016 RPIC12D_RS13035 7ea60d6e523fd18dd5c6438bcace2c83 781 SUPERFAMILY SSF51735 184 461 3.13E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS13035 7ea60d6e523fd18dd5c6438bcace2c83 781 Gene3D G3DSA:3.40.50.720 182 464 6.1E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS13035 7ea60d6e523fd18dd5c6438bcace2c83 781 SUPERFAMILY SSF53223 31 182 1.65E-51 T 22-04-2016 RPIC12D_RS13035 7ea60d6e523fd18dd5c6438bcace2c83 781 Pfam PF01515 Phosphate acetyl/butaryl transferase 450 772 1.7E-99 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RPIC12D_RS13035 7ea60d6e523fd18dd5c6438bcace2c83 781 SMART SM01274 39 172 6.8E-77 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RPIC12D_RS13035 7ea60d6e523fd18dd5c6438bcace2c83 781 PANTHER PTHR23406 53 463 3.0E-162 T 22-04-2016 RPIC12D_RS13035 7ea60d6e523fd18dd5c6438bcace2c83 781 SMART SM00919 184 421 2.9E-139 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RPIC12D_RS06685 e05569c6ce06bf4a1e07b637c0a874b0 399 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 396 5.3E-185 T 22-04-2016 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 RPIC12D_RS06685 e05569c6ce06bf4a1e07b637c0a874b0 399 SUPERFAMILY SSF53383 2 397 1.9E-87 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS06685 e05569c6ce06bf4a1e07b637c0a874b0 399 Gene3D G3DSA:3.40.640.10 44 263 1.3E-58 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS06685 e05569c6ce06bf4a1e07b637c0a874b0 399 PANTHER PTHR11751:SF354 12 395 3.4E-115 T 22-04-2016 RPIC12D_RS06685 e05569c6ce06bf4a1e07b637c0a874b0 399 Gene3D G3DSA:3.90.1150.10 264 397 1.4E-27 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS06685 e05569c6ce06bf4a1e07b637c0a874b0 399 PANTHER PTHR11751 12 395 3.4E-115 T 22-04-2016 RPIC12D_RS06685 e05569c6ce06bf4a1e07b637c0a874b0 399 Pfam PF00155 Aminotransferase class I and II 32 384 8.1E-46 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC12D_RS16090 84e7c265f182ce776755b4a3cc6df423 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 33 279 3.4E-32 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS16090 84e7c265f182ce776755b4a3cc6df423 328 PANTHER PTHR30482:SF8 14 320 8.8E-106 T 22-04-2016 RPIC12D_RS16090 84e7c265f182ce776755b4a3cc6df423 328 PANTHER PTHR30482 14 320 8.8E-106 T 22-04-2016 RPIC12D_RS00875 fff8ef7bbf754b2d28ac7634465bc4bd 322 PANTHER PTHR36698 2 319 2.7E-44 T 22-04-2016 RPIC12D_RS00875 fff8ef7bbf754b2d28ac7634465bc4bd 322 Pfam PF02470 MlaD protein 38 113 1.2E-13 T 22-04-2016 IPR003399 Mce/MlaD RPIC12D_RS00875 fff8ef7bbf754b2d28ac7634465bc4bd 322 PANTHER PTHR36698:SF2 2 319 2.7E-44 T 22-04-2016 RPIC12D_RS06555 06a9197bf9cf9c32e1113846430affe9 89 SUPERFAMILY SSF47027 3 85 4.19E-26 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RPIC12D_RS06555 06a9197bf9cf9c32e1113846430affe9 89 Pfam PF00887 Acyl CoA binding protein 5 84 6.4E-24 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RPIC12D_RS06555 06a9197bf9cf9c32e1113846430affe9 89 PANTHER PTHR23310 1 84 1.4E-30 T 22-04-2016 RPIC12D_RS06555 06a9197bf9cf9c32e1113846430affe9 89 Gene3D G3DSA:1.20.80.10 1 85 2.6E-28 T 22-04-2016 IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle RPIC12D_RS06555 06a9197bf9cf9c32e1113846430affe9 89 PRINTS PR00689 Acyl-coA-binding protein signature 66 83 1.9E-18 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RPIC12D_RS06555 06a9197bf9cf9c32e1113846430affe9 89 PRINTS PR00689 Acyl-coA-binding protein signature 45 60 1.9E-18 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RPIC12D_RS06555 06a9197bf9cf9c32e1113846430affe9 89 PRINTS PR00689 Acyl-coA-binding protein signature 5 20 1.9E-18 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RPIC12D_RS06555 06a9197bf9cf9c32e1113846430affe9 89 PRINTS PR00689 Acyl-coA-binding protein signature 22 40 1.9E-18 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RPIC12D_RS10270 75498d704905c257a7d354ce4ec4844b 268 PANTHER PTHR16950:SF16 34 264 1.3E-39 T 22-04-2016 RPIC12D_RS10270 75498d704905c257a7d354ce4ec4844b 268 PANTHER PTHR16950 34 264 1.3E-39 T 22-04-2016 RPIC12D_RS10270 75498d704905c257a7d354ce4ec4844b 268 Pfam PF02535 ZIP Zinc transporter 98 259 1.9E-31 T 22-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 RPIC12D_RS05325 51a756cba935b846a45a578381aa5c38 281 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 4.3E-21 T 22-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal RPIC12D_RS05325 51a756cba935b846a45a578381aa5c38 281 Gene3D G3DSA:3.90.260.10 169 267 4.8E-10 T 22-04-2016 IPR002931 Transglutaminase-like RPIC12D_RS05325 51a756cba935b846a45a578381aa5c38 281 Pfam PF01841 Transglutaminase-like superfamily 133 226 6.3E-20 T 22-04-2016 IPR002931 Transglutaminase-like RPIC12D_RS05325 51a756cba935b846a45a578381aa5c38 281 PANTHER PTHR33490:SF5 4 271 7.0E-60 T 22-04-2016 RPIC12D_RS05325 51a756cba935b846a45a578381aa5c38 281 PANTHER PTHR33490 4 271 7.0E-60 T 22-04-2016 RPIC12D_RS05325 51a756cba935b846a45a578381aa5c38 281 SMART SM00460 164 229 2.8E-11 T 22-04-2016 IPR002931 Transglutaminase-like RPIC12D_RS05325 51a756cba935b846a45a578381aa5c38 281 SUPERFAMILY SSF54001 51 273 3.78E-39 T 22-04-2016 RPIC12D_RS12040 042853e14e9de1eb63292172f4c0fd26 222 PANTHER PTHR23359 1 221 1.8E-110 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC12D_RS12040 042853e14e9de1eb63292172f4c0fd26 222 Hamap MF_00235 Adenylate kinase [adk]. 1 221 52.707 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC12D_RS12040 042853e14e9de1eb63292172f4c0fd26 222 TIGRFAM TIGR01351 adk: adenylate kinase 2 187 7.4E-74 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC12D_RS12040 042853e14e9de1eb63292172f4c0fd26 222 Pfam PF00406 Adenylate kinase 5 185 8.5E-58 T 22-04-2016 RPIC12D_RS12040 042853e14e9de1eb63292172f4c0fd26 222 PRINTS PR00094 Adenylate kinase signature 173 187 2.4E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC12D_RS12040 042853e14e9de1eb63292172f4c0fd26 222 PRINTS PR00094 Adenylate kinase signature 81 97 2.4E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC12D_RS12040 042853e14e9de1eb63292172f4c0fd26 222 PRINTS PR00094 Adenylate kinase signature 32 46 2.4E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC12D_RS12040 042853e14e9de1eb63292172f4c0fd26 222 PRINTS PR00094 Adenylate kinase signature 4 17 2.4E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC12D_RS12040 042853e14e9de1eb63292172f4c0fd26 222 PRINTS PR00094 Adenylate kinase signature 156 171 2.4E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC12D_RS12040 042853e14e9de1eb63292172f4c0fd26 222 SUPERFAMILY SSF52540 1 218 2.13E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12040 042853e14e9de1eb63292172f4c0fd26 222 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC12D_RS12040 042853e14e9de1eb63292172f4c0fd26 222 Gene3D G3DSA:3.40.50.300 1 218 1.6E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12040 042853e14e9de1eb63292172f4c0fd26 222 Pfam PF05191 Adenylate kinase, active site lid 123 158 4.2E-17 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC12D_RS06590 fc45a9e02f25516c48da566a8f9af6db 159 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 1 159 20.094 T 22-04-2016 IPR022920 Disulphide bond formation protein DsbB RPIC12D_RS06590 fc45a9e02f25516c48da566a8f9af6db 159 SUPERFAMILY SSF158442 8 151 2.35E-35 T 22-04-2016 RPIC12D_RS06590 fc45a9e02f25516c48da566a8f9af6db 159 Gene3D G3DSA:1.20.1550.10 4 158 5.4E-47 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain RPIC12D_RS06590 fc45a9e02f25516c48da566a8f9af6db 159 Pfam PF02600 Disulfide bond formation protein DsbB 6 151 3.5E-37 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 RPIC12D_RS06590 fc45a9e02f25516c48da566a8f9af6db 159 PANTHER PTHR36570 1 156 1.9E-20 T 22-04-2016 RPIC12D_RS02805 66a1ddcf8ccd8e0562b751e89fa78faf 745 Gene3D G3DSA:1.10.287.950 496 714 1.0E-49 T 22-04-2016 RPIC12D_RS02805 66a1ddcf8ccd8e0562b751e89fa78faf 745 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 609 638 1.0E-6 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS02805 66a1ddcf8ccd8e0562b751e89fa78faf 745 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 510 539 1.0E-6 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC12D_RS02805 66a1ddcf8ccd8e0562b751e89fa78faf 745 PANTHER PTHR32089:SF43 450 745 4.3E-91 T 22-04-2016 RPIC12D_RS02805 66a1ddcf8ccd8e0562b751e89fa78faf 745 SMART SM00283 482 743 4.5E-80 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS02805 66a1ddcf8ccd8e0562b751e89fa78faf 745 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 537 742 9.6E-49 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS02805 66a1ddcf8ccd8e0562b751e89fa78faf 745 SUPERFAMILY SSF58104 443 744 7.67E-65 T 22-04-2016 RPIC12D_RS02805 66a1ddcf8ccd8e0562b751e89fa78faf 745 PANTHER PTHR32089 450 745 4.3E-91 T 22-04-2016 RPIC12D_RS02805 66a1ddcf8ccd8e0562b751e89fa78faf 745 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 230 321 9.8E-6 T 22-04-2016 IPR029095 NarX-like, N-terminal RPIC12D_RS02805 66a1ddcf8ccd8e0562b751e89fa78faf 745 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 97 199 1.4E-17 T 22-04-2016 IPR029095 NarX-like, N-terminal RPIC12D_RS00925 075dcbfb760cbdb6847c241c67b486f5 320 SUPERFAMILY SSF53850 99 299 8.07E-40 T 22-04-2016 RPIC12D_RS00925 075dcbfb760cbdb6847c241c67b486f5 320 Gene3D G3DSA:3.40.190.10 184 263 1.3E-15 T 22-04-2016 RPIC12D_RS00925 075dcbfb760cbdb6847c241c67b486f5 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 3.9E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS00925 075dcbfb760cbdb6847c241c67b486f5 320 Gene3D G3DSA:1.10.10.10 7 93 8.7E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00925 075dcbfb760cbdb6847c241c67b486f5 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 5.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS00925 075dcbfb760cbdb6847c241c67b486f5 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 5.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS00925 075dcbfb760cbdb6847c241c67b486f5 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 5.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS00925 075dcbfb760cbdb6847c241c67b486f5 320 Pfam PF03466 LysR substrate binding domain 98 294 2.7E-36 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS00925 075dcbfb760cbdb6847c241c67b486f5 320 Gene3D G3DSA:3.40.190.10 100 183 3.6E-29 T 22-04-2016 RPIC12D_RS00925 075dcbfb760cbdb6847c241c67b486f5 320 SUPERFAMILY SSF46785 8 92 2.42E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00925 075dcbfb760cbdb6847c241c67b486f5 320 PANTHER PTHR30537 5 313 4.1E-110 T 22-04-2016 RPIC12D_RS00925 075dcbfb760cbdb6847c241c67b486f5 320 PANTHER PTHR30537:SF26 5 313 4.1E-110 T 22-04-2016 RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 Gene3D G3DSA:1.10.760.10 299 380 4.1E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 Gene3D G3DSA:1.10.287.90 37 123 1.5E-25 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 37 117 6.7E-14 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 PANTHER PTHR22888 38 311 3.4E-97 T 22-04-2016 RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 45 267 7.4E-60 T 22-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 203 251 - T 22-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 PRINTS PR01166 Cytochrome c oxidase subunit II signature 106 126 6.7E-39 T 22-04-2016 RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 PRINTS PR01166 Cytochrome c oxidase subunit II signature 128 147 6.7E-39 T 22-04-2016 RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 PRINTS PR01166 Cytochrome c oxidase subunit II signature 240 257 6.7E-39 T 22-04-2016 RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 PRINTS PR01166 Cytochrome c oxidase subunit II signature 202 222 6.7E-39 T 22-04-2016 RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 PRINTS PR01166 Cytochrome c oxidase subunit II signature 94 106 6.7E-39 T 22-04-2016 RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 PRINTS PR01166 Cytochrome c oxidase subunit II signature 178 199 6.7E-39 T 22-04-2016 RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 PRINTS PR01166 Cytochrome c oxidase subunit II signature 222 239 6.7E-39 T 22-04-2016 RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 SUPERFAMILY SSF49503 129 272 1.28E-51 T 22-04-2016 IPR008972 Cupredoxin RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 132 256 1.0E-37 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 292 361 3.2E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 Gene3D G3DSA:2.60.40.420 124 298 9.1E-57 T 22-04-2016 IPR008972 Cupredoxin RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 SUPERFAMILY SSF81464 33 126 5.56E-27 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 PANTHER PTHR22888:SF2 38 311 3.4E-97 T 22-04-2016 RPIC12D_RS01175 0012fa63f3cd8fa61924cbccb699c75a 418 SUPERFAMILY SSF46626 237 372 5.7E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS13840 adf2815892241698f3adca5fd8edd97e 219 SUPERFAMILY SSF55154 1 213 1.21E-41 T 22-04-2016 IPR033469 CYTH-like domain RPIC12D_RS13840 adf2815892241698f3adca5fd8edd97e 219 PANTHER PTHR39569:SF1 2 210 6.2E-38 T 22-04-2016 RPIC12D_RS13840 adf2815892241698f3adca5fd8edd97e 219 Pfam PF01928 CYTH domain 3 208 1.4E-38 T 22-04-2016 IPR023577 CYTH domain RPIC12D_RS13840 adf2815892241698f3adca5fd8edd97e 219 Gene3D G3DSA:2.40.320.10 1 214 1.4E-34 T 22-04-2016 IPR023577 CYTH domain RPIC12D_RS13840 adf2815892241698f3adca5fd8edd97e 219 PANTHER PTHR39569 2 210 6.2E-38 T 22-04-2016 RPIC12D_RS13840 adf2815892241698f3adca5fd8edd97e 219 SMART SM01118 2 214 9.8E-34 T 22-04-2016 IPR023577 CYTH domain RPIC12D_RS08185 c03e963f1d32c37ab1d172185873a83a 129 PANTHER PTHR37950:SF1 2 128 5.6E-39 T 22-04-2016 RPIC12D_RS08185 c03e963f1d32c37ab1d172185873a83a 129 SUPERFAMILY SSF55331 2 127 2.49E-40 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily RPIC12D_RS08185 c03e963f1d32c37ab1d172185873a83a 129 Gene3D G3DSA:3.30.429.10 2 127 6.7E-50 T 22-04-2016 RPIC12D_RS08185 c03e963f1d32c37ab1d172185873a83a 129 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 126 2.4E-40 T 22-04-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10|UniPathway: UPA00208 RPIC12D_RS08185 c03e963f1d32c37ab1d172185873a83a 129 PANTHER PTHR37950 2 128 5.6E-39 T 22-04-2016 RPIC12D_RS17365 b36fbf6c1c9bdb895033d005cc272340 448 Pfam PF11638 DnaA N-terminal domain 185 246 1.2E-16 T 22-04-2016 IPR024633 DnaA N-terminal domain RPIC12D_RS17365 b36fbf6c1c9bdb895033d005cc272340 448 PANTHER PTHR30050:SF2 182 285 7.6E-54 T 22-04-2016 RPIC12D_RS17365 b36fbf6c1c9bdb895033d005cc272340 448 PANTHER PTHR30050:SF2 374 448 7.6E-54 T 22-04-2016 RPIC12D_RS17365 b36fbf6c1c9bdb895033d005cc272340 448 SUPERFAMILY SSF52540 376 445 4.29E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS17365 b36fbf6c1c9bdb895033d005cc272340 448 Gene3D G3DSA:3.40.50.300 373 448 1.1E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS17365 b36fbf6c1c9bdb895033d005cc272340 448 Pfam PF00308 Bacterial dnaA protein 376 448 1.5E-27 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA RPIC12D_RS17365 b36fbf6c1c9bdb895033d005cc272340 448 PANTHER PTHR30050 182 285 7.6E-54 T 22-04-2016 RPIC12D_RS17365 b36fbf6c1c9bdb895033d005cc272340 448 PANTHER PTHR30050 374 448 7.6E-54 T 22-04-2016 RPIC12D_RS17365 b36fbf6c1c9bdb895033d005cc272340 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 409 429 1.7E-11 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RPIC12D_RS17365 b36fbf6c1c9bdb895033d005cc272340 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 441 448 1.7E-11 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RPIC12D_RS16465 2c64d3da2a8c5bf605139191d09c5264 125 Pfam PF11387 Protein of unknown function (DUF2795) 74 117 1.3E-14 T 22-04-2016 IPR021527 Protein of unknown function DUF2795 RPIC12D_RS11645 fa80f967b6b9682f084da9e7a33bceb4 224 Gene3D G3DSA:3.40.140.10 101 223 1.5E-45 T 22-04-2016 RPIC12D_RS11645 fa80f967b6b9682f084da9e7a33bceb4 224 PANTHER PTHR30471:SF5 1 224 1.3E-104 T 22-04-2016 RPIC12D_RS11645 fa80f967b6b9682f084da9e7a33bceb4 224 Gene3D G3DSA:1.10.150.20 47 85 5.6E-7 T 22-04-2016 RPIC12D_RS11645 fa80f967b6b9682f084da9e7a33bceb4 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 223 2.1E-70 T 22-04-2016 IPR001405 RadC protein RPIC12D_RS11645 fa80f967b6b9682f084da9e7a33bceb4 224 PANTHER PTHR30471 1 224 1.3E-104 T 22-04-2016 RPIC12D_RS11645 fa80f967b6b9682f084da9e7a33bceb4 224 Pfam PF04002 RadC-like JAB domain 104 221 4.5E-41 T 22-04-2016 IPR025657 RadC-like JAB domain RPIC12D_RS11645 fa80f967b6b9682f084da9e7a33bceb4 224 SUPERFAMILY SSF47781 16 88 8.26E-13 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RPIC12D_RS21105 b189c183b926fb532401b9d197112dab 238 Pfam PF10101 Predicted membrane protein (DUF2339) 189 238 8.8E-14 T 22-04-2016 IPR019286 Protein of unknown function DUF2339, transmembrane RPIC12D_RS03470 be2c23c3d0efd03f42061628ace4016a 208 SUPERFAMILY SSF53850 10 202 1.52E-20 T 22-04-2016 RPIC12D_RS03470 be2c23c3d0efd03f42061628ace4016a 208 Gene3D G3DSA:3.40.190.10 93 179 8.7E-9 T 22-04-2016 RPIC12D_RS03470 be2c23c3d0efd03f42061628ace4016a 208 Gene3D G3DSA:3.40.190.10 9 92 1.5E-7 T 22-04-2016 RPIC12D_RS03470 be2c23c3d0efd03f42061628ace4016a 208 Pfam PF03466 LysR substrate binding domain 6 201 2.4E-18 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS02185 3efb65fe5c89cead25889c7a55d6e18d 305 PANTHER PTHR30537 1 298 1.5E-97 T 22-04-2016 RPIC12D_RS02185 3efb65fe5c89cead25889c7a55d6e18d 305 Pfam PF03466 LysR substrate binding domain 87 294 1.2E-34 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS02185 3efb65fe5c89cead25889c7a55d6e18d 305 SUPERFAMILY SSF53850 89 299 2.53E-39 T 22-04-2016 RPIC12D_RS02185 3efb65fe5c89cead25889c7a55d6e18d 305 Gene3D G3DSA:1.10.10.10 1 84 1.0E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS02185 3efb65fe5c89cead25889c7a55d6e18d 305 Gene3D G3DSA:3.40.190.10 91 190 5.7E-22 T 22-04-2016 RPIC12D_RS02185 3efb65fe5c89cead25889c7a55d6e18d 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.9E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS02185 3efb65fe5c89cead25889c7a55d6e18d 305 PANTHER PTHR30537:SF5 1 298 1.5E-97 T 22-04-2016 RPIC12D_RS02185 3efb65fe5c89cead25889c7a55d6e18d 305 SUPERFAMILY SSF46785 1 86 8.02E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS03990 746c4ba6e98be085140f594aefd66315 117 Gene3D G3DSA:3.10.50.40 3 117 2.1E-48 T 22-04-2016 RPIC12D_RS03990 746c4ba6e98be085140f594aefd66315 117 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 22 115 7.2E-34 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RPIC12D_RS03990 746c4ba6e98be085140f594aefd66315 117 SUPERFAMILY SSF54534 5 117 4.71E-44 T 22-04-2016 RPIC12D_RS03990 746c4ba6e98be085140f594aefd66315 117 PANTHER PTHR10516 5 117 6.3E-57 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RPIC12D_RS05785 9fb6a30725a6d675fa3aad164c958ddf 360 SMART SM00530 40 101 0.0021 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC12D_RS05785 9fb6a30725a6d675fa3aad164c958ddf 360 PANTHER PTHR34475 24 360 6.8E-35 T 22-04-2016 RPIC12D_RS05785 9fb6a30725a6d675fa3aad164c958ddf 360 SUPERFAMILY SSF47413 35 103 6.68E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS05785 9fb6a30725a6d675fa3aad164c958ddf 360 Pfam PF13464 Domain of unknown function (DUF4115) 285 359 1.5E-20 T 22-04-2016 IPR025194 Domain of unknown function DUF4115 RPIC12D_RS05785 9fb6a30725a6d675fa3aad164c958ddf 360 PANTHER PTHR34475:SF1 24 360 6.8E-35 T 22-04-2016 RPIC12D_RS05785 9fb6a30725a6d675fa3aad164c958ddf 360 Gene3D G3DSA:1.10.260.40 27 106 2.3E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS05785 9fb6a30725a6d675fa3aad164c958ddf 360 Pfam PF13413 Helix-turn-helix domain 40 100 1.8E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS12345 499937bc5193f3acb3efff48d920078a 431 Pfam PF02253 Phospholipase A1 213 428 4.2E-41 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RPIC12D_RS12345 499937bc5193f3acb3efff48d920078a 431 SUPERFAMILY SSF56931 195 430 1.18E-60 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RPIC12D_RS12345 499937bc5193f3acb3efff48d920078a 431 PRINTS PR01486 Bacterial phospholipase A1 protein signature 304 322 2.2E-16 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RPIC12D_RS12345 499937bc5193f3acb3efff48d920078a 431 PRINTS PR01486 Bacterial phospholipase A1 protein signature 401 421 2.2E-16 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RPIC12D_RS12345 499937bc5193f3acb3efff48d920078a 431 PRINTS PR01486 Bacterial phospholipase A1 protein signature 340 358 2.2E-16 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RPIC12D_RS12345 499937bc5193f3acb3efff48d920078a 431 PRINTS PR01486 Bacterial phospholipase A1 protein signature 258 277 2.2E-16 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RPIC12D_RS12345 499937bc5193f3acb3efff48d920078a 431 PRINTS PR01486 Bacterial phospholipase A1 protein signature 211 228 2.2E-16 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RPIC12D_RS12345 499937bc5193f3acb3efff48d920078a 431 Gene3D G3DSA:2.40.230.10 212 431 3.8E-60 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RPIC12D_RS12345 499937bc5193f3acb3efff48d920078a 431 PANTHER PTHR40457 218 418 1.4E-22 T 22-04-2016 RPIC12D_RS06790 91bbfe8701a12ad08e3ccb4184f4c265 357 Gene3D G3DSA:2.160.10.10 152 308 5.8E-39 T 22-04-2016 RPIC12D_RS06790 91bbfe8701a12ad08e3ccb4184f4c265 357 Gene3D G3DSA:2.160.10.10 108 151 5.4E-11 T 22-04-2016 RPIC12D_RS06790 91bbfe8701a12ad08e3ccb4184f4c265 357 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 8 339 36.349 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 RPIC12D_RS06790 91bbfe8701a12ad08e3ccb4184f4c265 357 PANTHER PTHR22572:SF117 92 307 2.4E-45 T 22-04-2016 RPIC12D_RS06790 91bbfe8701a12ad08e3ccb4184f4c265 357 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 234 268 4.1E-7 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC12D_RS06790 91bbfe8701a12ad08e3ccb4184f4c265 357 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 153 187 2.5E-9 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC12D_RS06790 91bbfe8701a12ad08e3ccb4184f4c265 357 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 122 151 4.5E-5 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC12D_RS06790 91bbfe8701a12ad08e3ccb4184f4c265 357 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 7 342 2.2E-107 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 RPIC12D_RS06790 91bbfe8701a12ad08e3ccb4184f4c265 357 PANTHER PTHR22572 92 307 2.4E-45 T 22-04-2016 RPIC12D_RS06790 91bbfe8701a12ad08e3ccb4184f4c265 357 SUPERFAMILY SSF51161 31 329 1.33E-78 T 22-04-2016 IPR011004 Trimeric LpxA-like RPIC12D_RS06790 91bbfe8701a12ad08e3ccb4184f4c265 357 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 271 305 0.18 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC12D_RS06790 91bbfe8701a12ad08e3ccb4184f4c265 357 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 94 6.2E-19 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 RPIC12D_RS01005 e2986370154a1bf18647b30d8c565cc9 296 SUPERFAMILY SSF52540 30 280 2.8E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01005 e2986370154a1bf18647b30d8c565cc9 296 Gene3D G3DSA:3.40.50.300 41 203 1.9E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01005 e2986370154a1bf18647b30d8c565cc9 296 Pfam PF05621 Bacterial TniB protein 22 275 4.0E-101 T 22-04-2016 IPR008868 Bacterial TniB RPIC12D_RS06980 b41b90367da21957a679456fe3574bf0 232 Gene3D G3DSA:3.40.30.10 27 214 1.6E-47 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS06980 b41b90367da21957a679456fe3574bf0 232 SUPERFAMILY SSF52833 28 217 1.97E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS06980 b41b90367da21957a679456fe3574bf0 232 Pfam PF01323 DSBA-like thioredoxin domain 28 214 2.7E-29 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RPIC12D_RS06980 b41b90367da21957a679456fe3574bf0 232 PANTHER PTHR13887 11 213 6.5E-25 T 22-04-2016 RPIC12D_RS06980 b41b90367da21957a679456fe3574bf0 232 PIRSF PIRSF006386 24 228 1.8E-48 T 22-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa RPIC12D_RS16505 b2c009e667d846741fd442e62504f009 294 Gene3D G3DSA:3.40.190.10 188 263 6.9E-13 T 22-04-2016 RPIC12D_RS16505 b2c009e667d846741fd442e62504f009 294 Gene3D G3DSA:1.10.10.10 3 85 4.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16505 b2c009e667d846741fd442e62504f009 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 2.2E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS16505 b2c009e667d846741fd442e62504f009 294 Pfam PF03466 LysR substrate binding domain 90 288 1.5E-34 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS16505 b2c009e667d846741fd442e62504f009 294 Gene3D G3DSA:3.40.190.10 91 187 1.2E-19 T 22-04-2016 RPIC12D_RS16505 b2c009e667d846741fd442e62504f009 294 SUPERFAMILY SSF46785 4 113 2.64E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16505 b2c009e667d846741fd442e62504f009 294 PANTHER PTHR30126 4 246 1.1E-55 T 22-04-2016 RPIC12D_RS16505 b2c009e667d846741fd442e62504f009 294 SUPERFAMILY SSF53850 90 288 2.76E-31 T 22-04-2016 RPIC12D_RS16505 b2c009e667d846741fd442e62504f009 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.6E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS16505 b2c009e667d846741fd442e62504f009 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.6E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS16505 b2c009e667d846741fd442e62504f009 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.6E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS16505 b2c009e667d846741fd442e62504f009 294 PANTHER PTHR30126:SF11 4 246 1.1E-55 T 22-04-2016 RPIC12D_RS08090 8f1943feba5b7db6ef3e68da73148fde 396 SUPERFAMILY SSF56601 123 363 6.71E-56 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS08090 8f1943feba5b7db6ef3e68da73148fde 396 Gene3D G3DSA:3.40.710.10 116 361 6.4E-70 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS08090 8f1943feba5b7db6ef3e68da73148fde 396 PANTHER PTHR21581 85 360 1.5E-89 T 22-04-2016 RPIC12D_RS08090 8f1943feba5b7db6ef3e68da73148fde 396 PANTHER PTHR21581:SF8 85 360 1.5E-89 T 22-04-2016 RPIC12D_RS08090 8f1943feba5b7db6ef3e68da73148fde 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 162 1.0E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RPIC12D_RS08090 8f1943feba5b7db6ef3e68da73148fde 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 201 218 1.0E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RPIC12D_RS08090 8f1943feba5b7db6ef3e68da73148fde 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 228 241 1.0E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RPIC12D_RS08090 8f1943feba5b7db6ef3e68da73148fde 396 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 121 343 1.5E-57 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 RPIC12D_RS07320 4c9fc2da07c2fecd82db8587dbe99826 343 SUPERFAMILY SSF53850 36 337 2.22E-65 T 22-04-2016 RPIC12D_RS07320 4c9fc2da07c2fecd82db8587dbe99826 343 Gene3D G3DSA:3.40.190.10 134 272 5.8E-44 T 22-04-2016 RPIC12D_RS07320 4c9fc2da07c2fecd82db8587dbe99826 343 Gene3D G3DSA:3.40.190.10 8 129 1.5E-33 T 22-04-2016 RPIC12D_RS07320 4c9fc2da07c2fecd82db8587dbe99826 343 Gene3D G3DSA:3.40.190.10 273 328 1.5E-33 T 22-04-2016 RPIC12D_RS07320 4c9fc2da07c2fecd82db8587dbe99826 343 Pfam PF13343 Bacterial extracellular solute-binding protein 83 327 2.1E-51 T 22-04-2016 RPIC12D_RS07320 4c9fc2da07c2fecd82db8587dbe99826 343 PANTHER PTHR30006 13 301 1.9E-47 T 22-04-2016 RPIC12D_RS11000 606623ddac2a0d75cac39695f1d7a823 362 PANTHER PTHR23264 1 355 2.2E-163 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RPIC12D_RS11000 606623ddac2a0d75cac39695f1d7a823 362 PANTHER PTHR23264:SF19 1 355 2.2E-163 T 22-04-2016 RPIC12D_RS11000 606623ddac2a0d75cac39695f1d7a823 362 ProSitePatterns PS01215 Mrp family signature. 203 219 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 RPIC12D_RS11000 606623ddac2a0d75cac39695f1d7a823 362 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 340 37.904 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RPIC12D_RS11000 606623ddac2a0d75cac39695f1d7a823 362 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 96 339 1.4E-104 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RPIC12D_RS11000 606623ddac2a0d75cac39695f1d7a823 362 SUPERFAMILY SSF117916 3 84 4.58E-18 T 22-04-2016 RPIC12D_RS11000 606623ddac2a0d75cac39695f1d7a823 362 Pfam PF01883 Domain of unknown function DUF59 6 78 6.7E-23 T 22-04-2016 IPR002744 Domain of unknown function DUF59 RPIC12D_RS11000 606623ddac2a0d75cac39695f1d7a823 362 SUPERFAMILY SSF52540 88 324 4.35E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11000 606623ddac2a0d75cac39695f1d7a823 362 Gene3D G3DSA:3.40.50.300 94 339 2.8E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13435 be43a323307dafeb25eed184f30e3562 179 Pfam PF15567 Immunity protein 35 7 75 5.6E-11 T 22-04-2016 IPR029082 Immunity protein 35 RPIC12D_RS13435 be43a323307dafeb25eed184f30e3562 179 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 112 167 0.004 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 RPIC12D_RS13435 be43a323307dafeb25eed184f30e3562 179 Gene3D G3DSA:3.30.1390.10 112 167 7.1E-4 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RPIC12D_RS06865 920e4f0ecf3569ca90744ae8e7373469 121 Hamap MF_00460 Protein RnfH [rnfH]. 10 99 19.209 T 22-04-2016 IPR005346 RnfH protein RPIC12D_RS06865 920e4f0ecf3569ca90744ae8e7373469 121 PANTHER PTHR37483:SF1 7 111 2.0E-21 T 22-04-2016 RPIC12D_RS06865 920e4f0ecf3569ca90744ae8e7373469 121 PANTHER PTHR37483 7 111 2.0E-21 T 22-04-2016 RPIC12D_RS06865 920e4f0ecf3569ca90744ae8e7373469 121 Gene3D G3DSA:3.10.20.280 7 93 5.4E-26 T 22-04-2016 IPR005346 RnfH protein RPIC12D_RS06865 920e4f0ecf3569ca90744ae8e7373469 121 SUPERFAMILY SSF54285 9 83 4.36E-16 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RPIC12D_RS06865 920e4f0ecf3569ca90744ae8e7373469 121 Pfam PF03658 RnfH family Ubiquitin 10 91 6.1E-23 T 22-04-2016 IPR005346 RnfH protein RPIC12D_RS17000 130b52706680e280bf6ab70ff44113c5 165 Pfam PF04314 Protein of unknown function (DUF461) 32 134 1.4E-34 T 22-04-2016 IPR007410 DR1885-like metal-binding protein RPIC12D_RS17000 130b52706680e280bf6ab70ff44113c5 165 SUPERFAMILY SSF110087 10 144 4.71E-44 T 22-04-2016 IPR007410 DR1885-like metal-binding protein RPIC12D_RS17000 130b52706680e280bf6ab70ff44113c5 165 PANTHER PTHR36302 11 161 2.3E-26 T 22-04-2016 RPIC12D_RS17000 130b52706680e280bf6ab70ff44113c5 165 PANTHER PTHR36302:SF1 11 161 2.3E-26 T 22-04-2016 RPIC12D_RS06995 fca7801afdddc8e43972395e4baf1370 212 SUPERFAMILY SSF102114 46 137 1.08E-6 T 22-04-2016 RPIC12D_RS06995 fca7801afdddc8e43972395e4baf1370 212 Gene3D G3DSA:3.80.30.10 89 129 1.0E-7 T 22-04-2016 RPIC12D_RS06995 fca7801afdddc8e43972395e4baf1370 212 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 3 212 1.2E-107 T 22-04-2016 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 RPIC12D_RS06995 fca7801afdddc8e43972395e4baf1370 212 PIRSF PIRSF000370 1 212 4.0E-37 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 RPIC12D_RS06995 fca7801afdddc8e43972395e4baf1370 212 PANTHER PTHR11228:SF6 1 172 2.5E-25 T 22-04-2016 RPIC12D_RS06995 fca7801afdddc8e43972395e4baf1370 212 PANTHER PTHR11228 1 172 2.5E-25 T 22-04-2016 RPIC12D_RS06995 fca7801afdddc8e43972395e4baf1370 212 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 212 33.758 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 RPIC12D_RS06995 fca7801afdddc8e43972395e4baf1370 212 Pfam PF13394 4Fe-4S single cluster domain 25 124 2.3E-5 T 22-04-2016 RPIC12D_RS11920 a99e4476b4f83bf43385c254c35e5a2b 255 Pfam PF01925 Sulfite exporter TauE/SafE 13 250 1.3E-34 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIC12D_RS11920 a99e4476b4f83bf43385c254c35e5a2b 255 PANTHER PTHR30269 4 254 2.0E-51 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIC12D_RS11920 a99e4476b4f83bf43385c254c35e5a2b 255 PANTHER PTHR30269:SF10 4 254 2.0E-51 T 22-04-2016 RPIC12D_RS14050 18dd039720b4e4e541b2115c37118973 860 SUPERFAMILY SSF53448 279 566 4.61E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS14050 18dd039720b4e4e541b2115c37118973 860 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 119 780 51.116 T 22-04-2016 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 UniPathway: UPA00637 RPIC12D_RS14050 18dd039720b4e4e541b2115c37118973 860 PANTHER PTHR10587:SF63 502 763 1.4E-118 T 22-04-2016 RPIC12D_RS14050 18dd039720b4e4e541b2115c37118973 860 PANTHER PTHR10587 193 453 1.4E-118 T 22-04-2016 RPIC12D_RS14050 18dd039720b4e4e541b2115c37118973 860 PANTHER PTHR10587 502 763 1.4E-118 T 22-04-2016 RPIC12D_RS14050 18dd039720b4e4e541b2115c37118973 860 PANTHER PTHR10587:SF63 193 453 1.4E-118 T 22-04-2016 RPIC12D_RS14050 18dd039720b4e4e541b2115c37118973 860 Pfam PF00535 Glycosyl transferase family 2 281 463 1.1E-17 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RPIC12D_RS08340 4ea28ec40cc5266e194eadd1a3332191 366 PANTHER PTHR21085 2 362 8.9E-202 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS08340 4ea28ec40cc5266e194eadd1a3332191 366 Gene3D G3DSA:3.60.150.10 9 356 1.3E-153 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS08340 4ea28ec40cc5266e194eadd1a3332191 366 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 3.3E-142 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS08340 4ea28ec40cc5266e194eadd1a3332191 366 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS08340 4ea28ec40cc5266e194eadd1a3332191 366 PIRSF PIRSF001456 3 363 2.7E-135 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS08340 4ea28ec40cc5266e194eadd1a3332191 366 Pfam PF01264 Chorismate synthase 10 345 2.8E-135 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS08340 4ea28ec40cc5266e194eadd1a3332191 366 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 36.214 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS08340 4ea28ec40cc5266e194eadd1a3332191 366 SUPERFAMILY SSF103263 4 353 5.63E-146 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS08340 4ea28ec40cc5266e194eadd1a3332191 366 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS08340 4ea28ec40cc5266e194eadd1a3332191 366 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS01355 e912497b481b25d2017c2853c4572bc4 87 PANTHER PTHR24960:SF38 1 75 5.0E-28 T 22-04-2016 RPIC12D_RS01355 e912497b481b25d2017c2853c4572bc4 87 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC12D_RS01355 e912497b481b25d2017c2853c4572bc4 87 SUPERFAMILY SSF54862 4 77 1.87E-20 T 22-04-2016 RPIC12D_RS01355 e912497b481b25d2017c2853c4572bc4 87 Gene3D G3DSA:3.30.70.20 3 77 1.8E-19 T 22-04-2016 RPIC12D_RS01355 e912497b481b25d2017c2853c4572bc4 87 PANTHER PTHR24960 1 75 5.0E-28 T 22-04-2016 RPIC12D_RS01355 e912497b481b25d2017c2853c4572bc4 87 Pfam PF00037 4Fe-4S binding domain 4 25 2.0E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC12D_RS11005 4c0feb4def5ba94ec01c263a42149ae8 209 PRINTS PR01021 OMPA domain signature 134 149 2.1E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RPIC12D_RS11005 4c0feb4def5ba94ec01c263a42149ae8 209 PRINTS PR01021 OMPA domain signature 149 165 2.1E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RPIC12D_RS11005 4c0feb4def5ba94ec01c263a42149ae8 209 PRINTS PR01021 OMPA domain signature 104 126 2.1E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RPIC12D_RS11005 4c0feb4def5ba94ec01c263a42149ae8 209 Gene3D G3DSA:3.30.1330.60 93 204 5.0E-42 T 22-04-2016 IPR006665 OmpA-like domain RPIC12D_RS11005 4c0feb4def5ba94ec01c263a42149ae8 209 SUPERFAMILY SSF103088 92 206 2.35E-40 T 22-04-2016 IPR006665 OmpA-like domain RPIC12D_RS11005 4c0feb4def5ba94ec01c263a42149ae8 209 Pfam PF00691 OmpA family 104 198 2.0E-24 T 22-04-2016 IPR006665 OmpA-like domain RPIC12D_RS11005 4c0feb4def5ba94ec01c263a42149ae8 209 Pfam PF13441 YMGG-like Gly-zipper 24 66 1.1E-7 T 22-04-2016 IPR027367 YMGG-like Gly-zipper RPIC12D_RS11005 4c0feb4def5ba94ec01c263a42149ae8 209 PANTHER PTHR30128 38 208 1.2E-49 T 22-04-2016 RPIC12D_RS11005 4c0feb4def5ba94ec01c263a42149ae8 209 ProSitePatterns PS01068 OmpA-like domain. 136 180 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 RPIC12D_RS03630 f65715ffa7e5a2571c17c56a47b73c33 342 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 280 340 3.0E-9 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 RPIC12D_RS03630 f65715ffa7e5a2571c17c56a47b73c33 342 TIGRFAM TIGR02794 tolA_full: protein TolA 19 340 3.1E-53 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS03630 f65715ffa7e5a2571c17c56a47b73c33 342 Pfam PF13103 TonB C terminal 255 338 8.2E-24 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 RPIC12D_RS03630 f65715ffa7e5a2571c17c56a47b73c33 342 SUPERFAMILY SSF74653 244 341 1.57E-18 T 22-04-2016 RPIC12D_RS03630 f65715ffa7e5a2571c17c56a47b73c33 342 Gene3D G3DSA:3.30.1150.10 238 341 6.3E-27 T 22-04-2016 RPIC12D_RS26140 162e7861e120adc72c05342307ee5e84 127 SUPERFAMILY SSF52374 3 98 1.38E-27 T 22-04-2016 RPIC12D_RS26140 162e7861e120adc72c05342307ee5e84 127 PRINTS PR01038 Arginyl-tRNA synthetase signature 22 38 2.1E-14 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS26140 162e7861e120adc72c05342307ee5e84 127 PRINTS PR01038 Arginyl-tRNA synthetase signature 7 22 2.1E-14 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS26140 162e7861e120adc72c05342307ee5e84 127 PRINTS PR01038 Arginyl-tRNA synthetase signature 46 59 2.1E-14 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS26140 162e7861e120adc72c05342307ee5e84 127 Pfam PF00750 tRNA synthetases class I (R) 7 70 1.7E-9 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS26140 162e7861e120adc72c05342307ee5e84 127 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 17 26 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS26140 162e7861e120adc72c05342307ee5e84 127 PANTHER PTHR11956:SF6 8 127 5.7E-40 T 22-04-2016 RPIC12D_RS26140 162e7861e120adc72c05342307ee5e84 127 Gene3D G3DSA:3.40.50.620 3 116 7.3E-36 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS26140 162e7861e120adc72c05342307ee5e84 127 PANTHER PTHR11956 8 127 5.7E-40 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS03200 3304651f3235791e51c0e839a1a7f9d8 149 Pfam PF00436 Single-strand binding protein family 8 109 2.0E-12 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 RPIC12D_RS03200 3304651f3235791e51c0e839a1a7f9d8 149 PIRSF PIRSF002070 1 148 3.4E-18 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RPIC12D_RS03200 3304651f3235791e51c0e839a1a7f9d8 149 SUPERFAMILY SSF50249 2 117 5.39E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS03200 3304651f3235791e51c0e839a1a7f9d8 149 Gene3D G3DSA:2.40.50.140 4 113 2.9E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS12070 468b7a7cecc5518607eb1b39ab558490 192 SUPERFAMILY SSF52540 50 152 2.34E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12070 468b7a7cecc5518607eb1b39ab558490 192 PANTHER PTHR33540 19 153 1.0E-34 T 22-04-2016 RPIC12D_RS12070 468b7a7cecc5518607eb1b39ab558490 192 PANTHER PTHR33540:SF2 19 153 1.0E-34 T 22-04-2016 RPIC12D_RS12070 468b7a7cecc5518607eb1b39ab558490 192 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 25 151 6.8E-37 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RPIC12D_RS12070 468b7a7cecc5518607eb1b39ab558490 192 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 24 151 1.2E-34 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RPIC12D_RS12070 468b7a7cecc5518607eb1b39ab558490 192 Gene3D G3DSA:3.40.50.300 20 186 3.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS09295 e4cbab351ebc5eedc5f6359dc185e35b 362 PANTHER PTHR12725 79 230 4.3E-19 T 22-04-2016 RPIC12D_RS09295 e4cbab351ebc5eedc5f6359dc185e35b 362 Pfam PF01636 Phosphotransferase enzyme family 45 285 4.9E-56 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase RPIC12D_RS09295 e4cbab351ebc5eedc5f6359dc185e35b 362 SUPERFAMILY SSF56112 8 329 6.27E-60 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC12D_RS09295 e4cbab351ebc5eedc5f6359dc185e35b 362 Gene3D G3DSA:3.90.1200.10 128 328 7.1E-32 T 22-04-2016 RPIC12D_RS09295 e4cbab351ebc5eedc5f6359dc185e35b 362 PANTHER PTHR12725:SF80 79 230 4.3E-19 T 22-04-2016 RPIC12D_RS12600 6b42c463f42ee9f78ed4752e12e1a09a 252 Pfam PF07505 Protein of unknown function (DUF5131) 5 242 4.6E-103 T 22-04-2016 IPR011101 Protein of unknown function DUF5131 RPIC12D_RS11575 68e7ff74300e55e54f37e661ce29dcea 145 Pfam PF12802 MarR family 38 99 2.4E-13 T 22-04-2016 RPIC12D_RS11575 68e7ff74300e55e54f37e661ce29dcea 145 SMART SM00347 32 135 7.0E-4 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS11575 68e7ff74300e55e54f37e661ce29dcea 145 PANTHER PTHR33164 1 113 2.0E-12 T 22-04-2016 RPIC12D_RS11575 68e7ff74300e55e54f37e661ce29dcea 145 SUPERFAMILY SSF46785 6 128 6.59E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS11575 68e7ff74300e55e54f37e661ce29dcea 145 Gene3D G3DSA:1.10.10.10 11 130 2.4E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS11135 3a5db316473b92cef1208a1ed708a458 314 Pfam PF03466 LysR substrate binding domain 87 303 2.0E-36 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS11135 3a5db316473b92cef1208a1ed708a458 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.6E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS11135 3a5db316473b92cef1208a1ed708a458 314 PANTHER PTHR30346 1 313 1.4E-84 T 22-04-2016 RPIC12D_RS11135 3a5db316473b92cef1208a1ed708a458 314 Gene3D G3DSA:1.10.10.10 1 84 9.1E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS11135 3a5db316473b92cef1208a1ed708a458 314 SUPERFAMILY SSF53850 90 302 1.38E-32 T 22-04-2016 RPIC12D_RS11135 3a5db316473b92cef1208a1ed708a458 314 Gene3D G3DSA:3.40.190.10 171 281 5.9E-41 T 22-04-2016 RPIC12D_RS11135 3a5db316473b92cef1208a1ed708a458 314 SUPERFAMILY SSF46785 1 85 1.14E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS11135 3a5db316473b92cef1208a1ed708a458 314 Gene3D G3DSA:3.40.190.10 88 170 2.7E-26 T 22-04-2016 RPIC12D_RS11135 3a5db316473b92cef1208a1ed708a458 314 PANTHER PTHR30346:SF0 1 313 1.4E-84 T 22-04-2016 RPIC12D_RS11135 3a5db316473b92cef1208a1ed708a458 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS11135 3a5db316473b92cef1208a1ed708a458 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS11135 3a5db316473b92cef1208a1ed708a458 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS08275 0b47aaf06d05f02fea639510b3d43207 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.545 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS08275 0b47aaf06d05f02fea639510b3d43207 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.2E-14 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS08275 0b47aaf06d05f02fea639510b3d43207 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.2E-14 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS08275 0b47aaf06d05f02fea639510b3d43207 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.2E-14 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS08275 0b47aaf06d05f02fea639510b3d43207 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS08275 0b47aaf06d05f02fea639510b3d43207 65 Pfam PF01632 Ribosomal protein L35 2 62 6.7E-22 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS08275 0b47aaf06d05f02fea639510b3d43207 65 PANTHER PTHR33343 1 65 4.2E-20 T 22-04-2016 RPIC12D_RS08275 0b47aaf06d05f02fea639510b3d43207 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 5.4E-24 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS08275 0b47aaf06d05f02fea639510b3d43207 65 SUPERFAMILY SSF143034 2 64 1.44E-21 T 22-04-2016 RPIC12D_RS16045 d052fbc7abfb9d1a506103e51cfed4f2 72 Pfam PF03466 LysR substrate binding domain 2 61 2.2E-11 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS16045 d052fbc7abfb9d1a506103e51cfed4f2 72 Gene3D G3DSA:3.40.190.10 1 28 3.6E-6 T 22-04-2016 RPIC12D_RS16045 d052fbc7abfb9d1a506103e51cfed4f2 72 SUPERFAMILY SSF53850 2 65 1.12E-10 T 22-04-2016 RPIC12D_RS11830 540ad0fb3d6db0286afca3df45062508 542 SUPERFAMILY SSF56235 10 542 2.32E-175 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS11830 540ad0fb3d6db0286afca3df45062508 542 PANTHER PTHR11686:SF8 1 542 4.5E-229 T 22-04-2016 RPIC12D_RS11830 540ad0fb3d6db0286afca3df45062508 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 235 251 2.93E-39 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC12D_RS11830 540ad0fb3d6db0286afca3df45062508 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 119 137 2.93E-39 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC12D_RS11830 540ad0fb3d6db0286afca3df45062508 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 413 428 2.93E-39 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC12D_RS11830 540ad0fb3d6db0286afca3df45062508 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 44 69 2.93E-39 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC12D_RS11830 540ad0fb3d6db0286afca3df45062508 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 437 454 2.93E-39 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC12D_RS11830 540ad0fb3d6db0286afca3df45062508 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 264 283 2.93E-39 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC12D_RS11830 540ad0fb3d6db0286afca3df45062508 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 382 400 2.93E-39 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC12D_RS11830 540ad0fb3d6db0286afca3df45062508 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 137 156 2.93E-39 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC12D_RS11830 540ad0fb3d6db0286afca3df45062508 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 358 376 2.93E-39 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC12D_RS11830 540ad0fb3d6db0286afca3df45062508 542 PANTHER PTHR11686 1 542 4.5E-229 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC12D_RS11830 540ad0fb3d6db0286afca3df45062508 542 Pfam PF01019 Gamma-glutamyltranspeptidase 37 537 1.4E-155 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC12D_RS03010 c0222f7448126dc94416ce4ab48e76f4 110 SUPERFAMILY SSF52821 3 106 4.32E-26 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS03010 c0222f7448126dc94416ce4ab48e76f4 110 Pfam PF00581 Rhodanese-like domain 10 101 2.7E-14 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS03010 c0222f7448126dc94416ce4ab48e76f4 110 Gene3D G3DSA:3.40.250.10 2 108 9.0E-27 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS03010 c0222f7448126dc94416ce4ab48e76f4 110 SMART SM00450 7 105 8.4E-20 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS14440 b5585237e06b3516fb0a8d8053ec4c74 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 202 221 1.5E-8 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC12D_RS14440 b5585237e06b3516fb0a8d8053ec4c74 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 182 201 1.5E-8 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC12D_RS14440 b5585237e06b3516fb0a8d8053ec4c74 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 64 86 1.5E-8 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC12D_RS14440 b5585237e06b3516fb0a8d8053ec4c74 262 PIRSF PIRSF006648 11 259 5.4E-20 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC12D_RS14440 b5585237e06b3516fb0a8d8053ec4c74 262 PANTHER PTHR30413:SF2 1 261 2.9E-68 T 22-04-2016 RPIC12D_RS14440 b5585237e06b3516fb0a8d8053ec4c74 262 PANTHER PTHR30413 1 261 2.9E-68 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC12D_RS14440 b5585237e06b3516fb0a8d8053ec4c74 262 Pfam PF01061 ABC-2 type transporter 15 225 7.4E-38 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RPIC12D_RS12030 06151ab0f525ccb1109be7294a1adecf 62 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.286 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 RPIC12D_RS12030 06151ab0f525ccb1109be7294a1adecf 62 SUPERFAMILY SSF158997 1 52 2.49E-21 T 22-04-2016 RPIC12D_RS12030 06151ab0f525ccb1109be7294a1adecf 62 PANTHER PTHR33505 1 53 2.5E-23 T 22-04-2016 RPIC12D_RS12030 06151ab0f525ccb1109be7294a1adecf 62 Gene3D G3DSA:2.20.25.10 8 54 4.2E-25 T 22-04-2016 RPIC12D_RS12030 06151ab0f525ccb1109be7294a1adecf 62 Pfam PF03966 Trm112p-like protein 2 41 3.2E-11 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 RPIC12D_RS04405 b2d4cb5684ff07c1199824840ee1e869 422 PANTHER PTHR10120:SF24 10 416 3.1E-112 T 22-04-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 RPIC12D_RS04405 b2d4cb5684ff07c1199824840ee1e869 422 Gene3D G3DSA:3.30.2010.10 205 295 3.2E-19 T 22-04-2016 RPIC12D_RS04405 b2d4cb5684ff07c1199824840ee1e869 422 Pfam PF01435 Peptidase family M48 210 417 2.7E-38 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RPIC12D_RS04405 b2d4cb5684ff07c1199824840ee1e869 422 PANTHER PTHR10120 10 416 3.1E-112 T 22-04-2016 RPIC12D_RS04405 b2d4cb5684ff07c1199824840ee1e869 422 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 29 207 8.4E-55 T 22-04-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 RPIC12D_RS08055 8ddd792ede6ae1a9b8e2c56b9c1a21a4 248 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 40 224 5.1E-52 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RPIC12D_RS08055 8ddd792ede6ae1a9b8e2c56b9c1a21a4 248 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 210 1.6E-67 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RPIC12D_RS08055 8ddd792ede6ae1a9b8e2c56b9c1a21a4 248 PANTHER PTHR30098 23 248 8.5E-59 T 22-04-2016 RPIC12D_RS08055 8ddd792ede6ae1a9b8e2c56b9c1a21a4 248 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 248 94.009 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RPIC12D_RS08055 8ddd792ede6ae1a9b8e2c56b9c1a21a4 248 SUPERFAMILY SSF55729 2 231 2.38E-81 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS12715 c76b7d2a5723c558b8d378025321a1c8 434 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 25 430 1.7E-64 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC12D_RS12715 c76b7d2a5723c558b8d378025321a1c8 434 PANTHER PTHR11562 7 173 1.7E-121 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC12D_RS12715 c76b7d2a5723c558b8d378025321a1c8 434 PANTHER PTHR11562 291 432 1.7E-121 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC12D_RS12715 c76b7d2a5723c558b8d378025321a1c8 434 Pfam PF01545 Cation efflux family 32 158 1.0E-24 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC12D_RS12715 c76b7d2a5723c558b8d378025321a1c8 434 Pfam PF01545 Cation efflux family 251 357 6.5E-10 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC12D_RS12715 c76b7d2a5723c558b8d378025321a1c8 434 SUPERFAMILY SSF161111 23 155 6.8E-43 T 22-04-2016 RPIC12D_RS12715 c76b7d2a5723c558b8d378025321a1c8 434 SUPERFAMILY SSF161111 290 358 6.8E-43 T 22-04-2016 RPIC12D_RS12715 c76b7d2a5723c558b8d378025321a1c8 434 PANTHER PTHR11562:SF40 7 173 1.7E-121 T 22-04-2016 RPIC12D_RS12715 c76b7d2a5723c558b8d378025321a1c8 434 PANTHER PTHR11562:SF40 291 432 1.7E-121 T 22-04-2016 RPIC12D_RS12715 c76b7d2a5723c558b8d378025321a1c8 434 Gene3D G3DSA:1.20.1510.10 290 356 1.1E-45 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RPIC12D_RS12715 c76b7d2a5723c558b8d378025321a1c8 434 Gene3D G3DSA:1.20.1510.10 25 155 1.1E-45 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RPIC12D_RS25515 b9817d9e583f21e4ecf24c2efaeadfe6 125 Pfam PF01569 PAP2 superfamily 1 60 4.4E-9 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC12D_RS25515 b9817d9e583f21e4ecf24c2efaeadfe6 125 SUPERFAMILY SSF48317 1 78 1.2E-16 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC12D_RS25515 b9817d9e583f21e4ecf24c2efaeadfe6 125 Gene3D G3DSA:1.20.144.10 1 82 3.0E-26 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC12D_RS09960 b972e3c48c1ecc1eae60fd9b8a96d404 404 PANTHER PTHR23502 19 397 3.0E-119 T 22-04-2016 RPIC12D_RS09960 b972e3c48c1ecc1eae60fd9b8a96d404 404 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 19 395 2.6E-93 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS09960 b972e3c48c1ecc1eae60fd9b8a96d404 404 Pfam PF07690 Major Facilitator Superfamily 25 242 1.4E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS09960 b972e3c48c1ecc1eae60fd9b8a96d404 404 Gene3D G3DSA:1.20.1250.20 212 401 5.6E-10 T 22-04-2016 RPIC12D_RS09960 b972e3c48c1ecc1eae60fd9b8a96d404 404 PANTHER PTHR23502:SF19 19 397 3.0E-119 T 22-04-2016 RPIC12D_RS09960 b972e3c48c1ecc1eae60fd9b8a96d404 404 Gene3D G3DSA:1.20.1250.20 19 200 7.6E-30 T 22-04-2016 RPIC12D_RS09960 b972e3c48c1ecc1eae60fd9b8a96d404 404 SUPERFAMILY SSF103473 10 400 6.28E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS12535 0e57a60b753e2b6fe21f0d47f95888b3 232 PANTHER PTHR30363 4 126 1.4E-44 T 22-04-2016 RPIC12D_RS12535 0e57a60b753e2b6fe21f0d47f95888b3 232 Gene3D G3DSA:1.10.10.10 3 66 4.2E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12535 0e57a60b753e2b6fe21f0d47f95888b3 232 SUPERFAMILY SSF46785 8 65 4.19E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12535 0e57a60b753e2b6fe21f0d47f95888b3 232 Pfam PF13280 WYL domain 140 230 2.7E-18 T 22-04-2016 IPR026881 WYL domain RPIC12D_RS12535 0e57a60b753e2b6fe21f0d47f95888b3 232 Pfam PF08279 HTH domain 10 63 2.2E-16 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 RPIC12D_RS12535 0e57a60b753e2b6fe21f0d47f95888b3 232 PANTHER PTHR30363:SF7 4 126 1.4E-44 T 22-04-2016 RPIC12D_RS00605 35a366ec1aa6efea19d51f59c6bbe7cc 313 Gene3D G3DSA:3.40.50.720 114 279 5.6E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS00605 35a366ec1aa6efea19d51f59c6bbe7cc 313 SUPERFAMILY SSF51735 98 278 1.07E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS00605 35a366ec1aa6efea19d51f59c6bbe7cc 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 278 2.0E-46 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RPIC12D_RS00605 35a366ec1aa6efea19d51f59c6bbe7cc 313 PANTHER PTHR10996 13 308 2.6E-109 T 22-04-2016 RPIC12D_RS00605 35a366ec1aa6efea19d51f59c6bbe7cc 313 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 217 233 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RPIC12D_RS00605 35a366ec1aa6efea19d51f59c6bbe7cc 313 Gene3D G3DSA:3.40.50.720 11 113 5.2E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS00605 35a366ec1aa6efea19d51f59c6bbe7cc 313 PANTHER PTHR10996:SF114 13 308 2.6E-109 T 22-04-2016 RPIC12D_RS07290 e38369cfb9a4c6e06d9154262cc7f132 239 Gene3D G3DSA:3.40.190.10 27 111 3.0E-25 T 22-04-2016 RPIC12D_RS07290 e38369cfb9a4c6e06d9154262cc7f132 239 SUPERFAMILY SSF53850 25 229 7.42E-35 T 22-04-2016 RPIC12D_RS07290 e38369cfb9a4c6e06d9154262cc7f132 239 Gene3D G3DSA:3.40.190.10 112 196 2.6E-14 T 22-04-2016 RPIC12D_RS07290 e38369cfb9a4c6e06d9154262cc7f132 239 Pfam PF03466 LysR substrate binding domain 22 224 9.8E-33 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS07290 e38369cfb9a4c6e06d9154262cc7f132 239 PANTHER PTHR30537:SF26 1 224 7.1E-45 T 22-04-2016 RPIC12D_RS07290 e38369cfb9a4c6e06d9154262cc7f132 239 PANTHER PTHR30537 1 224 7.1E-45 T 22-04-2016 RPIC12D_RS04190 eb41feede679498c8deef6344bbd84e8 168 Pfam PF05433 Glycine zipper 2TM domain 78 117 1.7E-10 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 RPIC12D_RS04190 eb41feede679498c8deef6344bbd84e8 168 PANTHER PTHR35603 64 165 3.3E-13 T 22-04-2016 RPIC12D_RS06100 673c43f5b74e6a410300ae968899cad3 518 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 21 501 6.0E-161 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RPIC12D_RS06100 673c43f5b74e6a410300ae968899cad3 518 Gene3D G3DSA:1.20.1250.20 480 507 2.4E-17 T 22-04-2016 RPIC12D_RS06100 673c43f5b74e6a410300ae968899cad3 518 Gene3D G3DSA:1.20.1250.20 272 428 2.4E-17 T 22-04-2016 RPIC12D_RS06100 673c43f5b74e6a410300ae968899cad3 518 Pfam PF07690 Major Facilitator Superfamily 24 416 6.6E-52 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS06100 673c43f5b74e6a410300ae968899cad3 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 23 47 4.6E-5 T 22-04-2016 RPIC12D_RS06100 673c43f5b74e6a410300ae968899cad3 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 114 134 4.6E-5 T 22-04-2016 RPIC12D_RS06100 673c43f5b74e6a410300ae968899cad3 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 346 366 4.6E-5 T 22-04-2016 RPIC12D_RS06100 673c43f5b74e6a410300ae968899cad3 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 168 4.6E-5 T 22-04-2016 RPIC12D_RS06100 673c43f5b74e6a410300ae968899cad3 518 PANTHER PTHR23501:SF52 5 509 1.3E-230 T 22-04-2016 RPIC12D_RS06100 673c43f5b74e6a410300ae968899cad3 518 SUPERFAMILY SSF103473 479 505 6.8E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS06100 673c43f5b74e6a410300ae968899cad3 518 SUPERFAMILY SSF103473 11 203 6.8E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS06100 673c43f5b74e6a410300ae968899cad3 518 SUPERFAMILY SSF103473 256 427 6.8E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS06100 673c43f5b74e6a410300ae968899cad3 518 PANTHER PTHR23501 5 509 1.3E-230 T 22-04-2016 RPIC12D_RS06100 673c43f5b74e6a410300ae968899cad3 518 Gene3D G3DSA:1.20.1250.20 21 203 9.4E-30 T 22-04-2016 RPIC12D_RS00845 22b1619803d92962ddd9fca841580fe5 165 PANTHER PTHR10739:SF26 16 164 9.0E-36 T 22-04-2016 RPIC12D_RS00845 22b1619803d92962ddd9fca841580fe5 165 Gene3D G3DSA:3.40.50.620 30 149 1.7E-32 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS00845 22b1619803d92962ddd9fca841580fe5 165 SUPERFAMILY SSF52374 30 160 2.76E-22 T 22-04-2016 RPIC12D_RS00845 22b1619803d92962ddd9fca841580fe5 165 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 32 96 2.8E-12 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIC12D_RS00845 22b1619803d92962ddd9fca841580fe5 165 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 21 162 3.4E-59 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 RPIC12D_RS00845 22b1619803d92962ddd9fca841580fe5 165 Pfam PF01467 Cytidylyltransferase-like 34 139 1.6E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIC12D_RS00845 22b1619803d92962ddd9fca841580fe5 165 PANTHER PTHR10739 16 164 9.0E-36 T 22-04-2016 RPIC12D_RS11045 f52da1b2b328f4eae67ed736360d27f3 221 SUPERFAMILY SSF52540 1 194 8.56E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11045 f52da1b2b328f4eae67ed736360d27f3 221 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 155 3.5E-19 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RPIC12D_RS11045 f52da1b2b328f4eae67ed736360d27f3 221 PANTHER PTHR13696 1 213 2.4E-20 T 22-04-2016 RPIC12D_RS11045 f52da1b2b328f4eae67ed736360d27f3 221 PIRSF PIRSF009320 1 203 7.7E-24 T 22-04-2016 RPIC12D_RS11045 f52da1b2b328f4eae67ed736360d27f3 221 Gene3D G3DSA:3.40.50.300 4 203 2.1E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11275 145e9d895922e6d5d5e913e848b1a10a 180 SUPERFAMILY SSF52266 2 169 5.5E-26 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain RPIC12D_RS11275 145e9d895922e6d5d5e913e848b1a10a 180 Gene3D G3DSA:3.40.50.1110 2 161 3.4E-21 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain RPIC12D_RS11275 145e9d895922e6d5d5e913e848b1a10a 180 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 7 161 8.1E-15 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain RPIC12D_RS08805 1d039bf19f5948e658f3b7f9fdb41ee9 273 Gene3D G3DSA:1.10.12.10 216 272 4.0E-18 T 22-04-2016 IPR014748 Crontonase, C-terminal RPIC12D_RS08805 1d039bf19f5948e658f3b7f9fdb41ee9 273 SUPERFAMILY SSF52096 28 272 1.66E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS08805 1d039bf19f5948e658f3b7f9fdb41ee9 273 PANTHER PTHR11941 36 270 1.6E-68 T 22-04-2016 RPIC12D_RS08805 1d039bf19f5948e658f3b7f9fdb41ee9 273 Pfam PF00378 Enoyl-CoA hydratase/isomerase 35 272 4.9E-45 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC12D_RS08805 1d039bf19f5948e658f3b7f9fdb41ee9 273 Gene3D G3DSA:3.90.226.10 32 212 1.4E-47 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS11585 4c468fd4e1e3d4ab44a2cb1fdd648822 555 Pfam PF02743 Cache domain 54 260 2.4E-12 T 22-04-2016 IPR033479 Double Cache domain 1 RPIC12D_RS11585 4c468fd4e1e3d4ab44a2cb1fdd648822 555 SUPERFAMILY SSF55073 401 553 1.73E-44 T 22-04-2016 IPR029787 Nucleotide cyclase RPIC12D_RS11585 4c468fd4e1e3d4ab44a2cb1fdd648822 555 Gene3D G3DSA:3.30.450.20 140 219 1.3E-4 T 22-04-2016 RPIC12D_RS11585 4c468fd4e1e3d4ab44a2cb1fdd648822 555 Gene3D G3DSA:3.30.70.270 398 553 6.9E-49 T 22-04-2016 RPIC12D_RS11585 4c468fd4e1e3d4ab44a2cb1fdd648822 555 Pfam PF00990 Diguanylate cyclase, GGDEF domain 396 551 7.6E-43 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS11585 4c468fd4e1e3d4ab44a2cb1fdd648822 555 PANTHER PTHR10799:SF750 299 551 1.7E-29 T 22-04-2016 RPIC12D_RS11585 4c468fd4e1e3d4ab44a2cb1fdd648822 555 PANTHER PTHR10799 299 551 1.7E-29 T 22-04-2016 RPIC12D_RS11585 4c468fd4e1e3d4ab44a2cb1fdd648822 555 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 393 553 7.8E-45 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS11585 4c468fd4e1e3d4ab44a2cb1fdd648822 555 SUPERFAMILY SSF103190 112 225 4.97E-7 T 22-04-2016 IPR029151 Periplasmic sensor domain-like RPIC12D_RS11585 4c468fd4e1e3d4ab44a2cb1fdd648822 555 SMART SM00267 385 555 5.5E-56 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS13885 463680e999c9c566a146d0263edf759c 157 Pfam PF01464 Transglycosylase SLT domain 34 138 2.5E-14 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RPIC12D_RS13885 463680e999c9c566a146d0263edf759c 157 SUPERFAMILY SSF53955 31 151 1.13E-36 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC12D_RS13885 463680e999c9c566a146d0263edf759c 157 Gene3D G3DSA:1.10.530.10 33 133 2.1E-17 T 22-04-2016 RPIC12D_RS16235 02e24a9f9f7bcf263fa3b07ad21f0bc7 272 PANTHER PTHR13696 1 258 1.8E-84 T 22-04-2016 RPIC12D_RS16235 02e24a9f9f7bcf263fa3b07ad21f0bc7 272 Gene3D G3DSA:3.40.50.300 1 248 3.9E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16235 02e24a9f9f7bcf263fa3b07ad21f0bc7 272 PIRSF PIRSF003092 1 272 8.0E-92 T 22-04-2016 IPR025501 ATP binding protein MinD RPIC12D_RS16235 02e24a9f9f7bcf263fa3b07ad21f0bc7 272 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 1.3E-28 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RPIC12D_RS16235 02e24a9f9f7bcf263fa3b07ad21f0bc7 272 PANTHER PTHR13696:SF1 1 258 1.8E-84 T 22-04-2016 RPIC12D_RS16235 02e24a9f9f7bcf263fa3b07ad21f0bc7 272 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 268 1.8E-105 T 22-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 RPIC12D_RS16235 02e24a9f9f7bcf263fa3b07ad21f0bc7 272 SUPERFAMILY SSF52540 1 269 3.26E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11825 15e0c5f9dc261b16bcc9ba924cae2ebc 294 SUPERFAMILY SSF53850 88 291 1.19E-31 T 22-04-2016 RPIC12D_RS11825 15e0c5f9dc261b16bcc9ba924cae2ebc 294 PANTHER PTHR30126 2 286 6.2E-52 T 22-04-2016 RPIC12D_RS11825 15e0c5f9dc261b16bcc9ba924cae2ebc 294 Pfam PF03466 LysR substrate binding domain 87 288 8.3E-33 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS11825 15e0c5f9dc261b16bcc9ba924cae2ebc 294 Gene3D G3DSA:3.40.190.10 85 193 7.1E-17 T 22-04-2016 RPIC12D_RS11825 15e0c5f9dc261b16bcc9ba924cae2ebc 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS11825 15e0c5f9dc261b16bcc9ba924cae2ebc 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS11825 15e0c5f9dc261b16bcc9ba924cae2ebc 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS11825 15e0c5f9dc261b16bcc9ba924cae2ebc 294 SUPERFAMILY SSF46785 4 79 3.41E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS11825 15e0c5f9dc261b16bcc9ba924cae2ebc 294 Gene3D G3DSA:1.10.10.10 4 79 8.4E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS11825 15e0c5f9dc261b16bcc9ba924cae2ebc 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.4E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS11825 15e0c5f9dc261b16bcc9ba924cae2ebc 294 Gene3D G3DSA:3.40.190.10 194 263 7.1E-11 T 22-04-2016 RPIC12D_RS00710 8ed171f866ac75c934c86c712576fb57 236 Pfam PF05036 Sporulation related domain 158 232 6.3E-20 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RPIC12D_RS00710 8ed171f866ac75c934c86c712576fb57 236 SUPERFAMILY SSF110997 158 233 2.35E-19 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RPIC12D_RS00710 8ed171f866ac75c934c86c712576fb57 236 Gene3D G3DSA:3.30.70.1070 154 234 9.5E-26 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RPIC12D_RS16725 03bb4247ef9bae91609061e4403104cf 152 Pfam PF04993 TfoX N-terminal domain 20 111 3.1E-27 T 22-04-2016 IPR007076 TfoX, N-terminal RPIC12D_RS16725 03bb4247ef9bae91609061e4403104cf 152 Gene3D G3DSA:3.30.1460.30 14 113 6.5E-31 T 22-04-2016 IPR007076 TfoX, N-terminal RPIC12D_RS16725 03bb4247ef9bae91609061e4403104cf 152 SUPERFAMILY SSF159894 13 112 1.62E-25 T 22-04-2016 RPIC12D_RS15705 084fd000e2d02335dc7e7f3a912909d7 272 Pfam PF04972 BON domain 77 128 7.4E-10 T 22-04-2016 IPR007055 BON domain RPIC12D_RS15705 084fd000e2d02335dc7e7f3a912909d7 272 Pfam PF04972 BON domain 138 203 2.2E-12 T 22-04-2016 IPR007055 BON domain RPIC12D_RS15705 084fd000e2d02335dc7e7f3a912909d7 272 PANTHER PTHR34606:SF4 27 209 2.5E-33 T 22-04-2016 RPIC12D_RS15705 084fd000e2d02335dc7e7f3a912909d7 272 PANTHER PTHR34606 27 209 2.5E-33 T 22-04-2016 RPIC12D_RS15705 084fd000e2d02335dc7e7f3a912909d7 272 SMART SM00749 143 206 4.0E-11 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria RPIC12D_RS15705 084fd000e2d02335dc7e7f3a912909d7 272 SMART SM00749 64 127 0.0051 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria RPIC12D_RS03590 e8f2259daf53db1de5c84011e170aecb 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 50 68 3.0E-8 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RPIC12D_RS03590 e8f2259daf53db1de5c84011e170aecb 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 14 39 3.0E-8 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RPIC12D_RS03590 e8f2259daf53db1de5c84011e170aecb 144 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 13 34 9.8E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS03590 e8f2259daf53db1de5c84011e170aecb 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS03590 e8f2259daf53db1de5c84011e170aecb 144 SUPERFAMILY SSF54523 15 135 3.69E-25 T 22-04-2016 RPIC12D_RS03590 e8f2259daf53db1de5c84011e170aecb 144 Gene3D G3DSA:3.30.700.10 15 110 1.9E-16 T 22-04-2016 RPIC12D_RS03590 e8f2259daf53db1de5c84011e170aecb 144 PANTHER PTHR30093 7 82 2.5E-18 T 22-04-2016 RPIC12D_RS03590 e8f2259daf53db1de5c84011e170aecb 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 35 5.7E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS03590 e8f2259daf53db1de5c84011e170aecb 144 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 36 124 1.1E-22 T 22-04-2016 IPR031982 Type IV minor pilin ComP RPIC12D_RS16500 8adb023b1ae468f7e3843de2ee6a49d1 439 PANTHER PTHR23501 12 363 2.1E-78 T 22-04-2016 RPIC12D_RS16500 8adb023b1ae468f7e3843de2ee6a49d1 439 PANTHER PTHR23501:SF19 12 363 2.1E-78 T 22-04-2016 RPIC12D_RS16500 8adb023b1ae468f7e3843de2ee6a49d1 439 Pfam PF07690 Major Facilitator Superfamily 16 241 6.4E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS16500 8adb023b1ae468f7e3843de2ee6a49d1 439 Gene3D G3DSA:1.20.1250.20 10 187 1.6E-28 T 22-04-2016 RPIC12D_RS16500 8adb023b1ae468f7e3843de2ee6a49d1 439 Gene3D G3DSA:1.20.1250.20 214 395 9.9E-17 T 22-04-2016 RPIC12D_RS16500 8adb023b1ae468f7e3843de2ee6a49d1 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 271 288 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS16500 8adb023b1ae468f7e3843de2ee6a49d1 439 SUPERFAMILY SSF103473 6 400 1.57E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS06855 f1c833a076ea9c54669026bcff694904 148 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 3 127 6.0E-64 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 RPIC12D_RS06855 f1c833a076ea9c54669026bcff694904 148 SUPERFAMILY SSF74982 2 127 5.23E-50 T 22-04-2016 IPR023620 Small protein B RPIC12D_RS06855 f1c833a076ea9c54669026bcff694904 148 PANTHER PTHR30308 2 146 3.3E-72 T 22-04-2016 RPIC12D_RS06855 f1c833a076ea9c54669026bcff694904 148 TIGRFAM TIGR00086 smpB: SsrA-binding protein 3 144 1.8E-53 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 RPIC12D_RS06855 f1c833a076ea9c54669026bcff694904 148 PANTHER PTHR30308:SF2 2 146 3.3E-72 T 22-04-2016 RPIC12D_RS06855 f1c833a076ea9c54669026bcff694904 148 Gene3D G3DSA:2.40.280.10 2 122 2.3E-49 T 22-04-2016 IPR023620 Small protein B RPIC12D_RS06855 f1c833a076ea9c54669026bcff694904 148 Pfam PF01668 SmpB protein 2 65 3.5E-28 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 RPIC12D_RS06855 f1c833a076ea9c54669026bcff694904 148 ProSitePatterns PS01317 SsrA-binding protein. 21 33 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site RPIC12D_RS06855 f1c833a076ea9c54669026bcff694904 148 Hamap MF_00023 SsrA-binding protein [smpB]. 1 148 74.373 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 RPIC12D_RS15695 8c71e7008ce795e361743403e50eef0f 430 SUPERFAMILY SSF51905 155 286 1.11E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS15695 8c71e7008ce795e361743403e50eef0f 430 SUPERFAMILY SSF55424 363 430 3.3E-19 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RPIC12D_RS15695 8c71e7008ce795e361743403e50eef0f 430 SUPERFAMILY SSF51905 37 154 3.01E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS15695 8c71e7008ce795e361743403e50eef0f 430 Gene3D G3DSA:3.50.50.60 287 359 9.7E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS15695 8c71e7008ce795e361743403e50eef0f 430 Gene3D G3DSA:3.50.50.60 36 152 9.7E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS15695 8c71e7008ce795e361743403e50eef0f 430 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 364 429 7.6E-22 T 22-04-2016 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 RPIC12D_RS15695 8c71e7008ce795e361743403e50eef0f 430 PANTHER PTHR10632 5 384 2.2E-112 T 22-04-2016 RPIC12D_RS15695 8c71e7008ce795e361743403e50eef0f 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 38 343 2.8E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS15695 8c71e7008ce795e361743403e50eef0f 430 PANTHER PTHR10632:SF10 5 384 2.2E-112 T 22-04-2016 RPIC12D_RS15695 8c71e7008ce795e361743403e50eef0f 430 Gene3D G3DSA:3.90.760.10 363 430 9.3E-25 T 22-04-2016 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 RPIC12D_RS15695 8c71e7008ce795e361743403e50eef0f 430 Gene3D G3DSA:3.50.50.60 156 286 5.4E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS04220 f30883f93034983d462b62076a72ac4c 374 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 224 233 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 RPIC12D_RS04220 f30883f93034983d462b62076a72ac4c 374 PANTHER PTHR11751 21 370 8.0E-102 T 22-04-2016 RPIC12D_RS04220 f30883f93034983d462b62076a72ac4c 374 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 5 367 61.99 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RPIC12D_RS04220 f30883f93034983d462b62076a72ac4c 374 Pfam PF00155 Aminotransferase class I and II 36 357 1.1E-56 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC12D_RS04220 f30883f93034983d462b62076a72ac4c 374 SUPERFAMILY SSF53383 8 363 3.13E-84 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS04220 f30883f93034983d462b62076a72ac4c 374 Gene3D G3DSA:3.40.640.10 49 266 7.3E-73 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS04220 f30883f93034983d462b62076a72ac4c 374 Gene3D G3DSA:3.90.1150.10 267 368 5.3E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS04220 f30883f93034983d462b62076a72ac4c 374 PANTHER PTHR11751:SF347 21 370 8.0E-102 T 22-04-2016 RPIC12D_RS04220 f30883f93034983d462b62076a72ac4c 374 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 364 3.6E-106 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RPIC12D_RS14790 64c3abfa71c69917405fb7907318679d 419 Gene3D G3DSA:1.20.1250.20 233 405 8.6E-10 T 22-04-2016 RPIC12D_RS14790 64c3abfa71c69917405fb7907318679d 419 Pfam PF07690 Major Facilitator Superfamily 29 198 1.7E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS14790 64c3abfa71c69917405fb7907318679d 419 Pfam PF07690 Major Facilitator Superfamily 230 410 5.1E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS14790 64c3abfa71c69917405fb7907318679d 419 Gene3D G3DSA:1.20.1250.20 23 197 1.6E-16 T 22-04-2016 RPIC12D_RS14790 64c3abfa71c69917405fb7907318679d 419 SUPERFAMILY SSF103473 17 410 2.62E-39 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS14790 64c3abfa71c69917405fb7907318679d 419 PANTHER PTHR23501:SF56 6 410 3.2E-90 T 22-04-2016 RPIC12D_RS14790 64c3abfa71c69917405fb7907318679d 419 PANTHER PTHR23501 6 410 3.2E-90 T 22-04-2016 RPIC12D_RS08845 4eb7c345fbf9d321f302c2f872529a86 300 SUPERFAMILY SSF51197 100 223 1.51E-17 T 22-04-2016 RPIC12D_RS08845 4eb7c345fbf9d321f302c2f872529a86 300 Gene3D G3DSA:2.60.120.330 124 223 3.8E-16 T 22-04-2016 IPR027443 Isopenicillin N synthase-like RPIC12D_RS08845 4eb7c345fbf9d321f302c2f872529a86 300 PANTHER PTHR12366:SF25 13 244 2.0E-141 T 22-04-2016 RPIC12D_RS08845 4eb7c345fbf9d321f302c2f872529a86 300 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 70 223 7.3E-48 T 22-04-2016 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 RPIC12D_RS08845 4eb7c345fbf9d321f302c2f872529a86 300 PANTHER PTHR12366 13 244 2.0E-141 T 22-04-2016 RPIC12D_RS14760 6162b84052a40b4cb4f3a6cbe55f24f8 221 Pfam PF00297 Ribosomal protein L3 56 189 7.5E-17 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14760 6162b84052a40b4cb4f3a6cbe55f24f8 221 Gene3D G3DSA:2.40.30.10 8 37 1.8E-9 T 22-04-2016 RPIC12D_RS14760 6162b84052a40b4cb4f3a6cbe55f24f8 221 Gene3D G3DSA:2.40.30.10 165 218 1.8E-9 T 22-04-2016 RPIC12D_RS14760 6162b84052a40b4cb4f3a6cbe55f24f8 221 SUPERFAMILY SSF50447 4 217 6.53E-80 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC12D_RS14760 6162b84052a40b4cb4f3a6cbe55f24f8 221 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 8 210 3.8E-87 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14760 6162b84052a40b4cb4f3a6cbe55f24f8 221 Gene3D G3DSA:4.10.960.10 84 164 2.2E-28 T 22-04-2016 RPIC12D_RS14760 6162b84052a40b4cb4f3a6cbe55f24f8 221 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 6 214 39.03 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14760 6162b84052a40b4cb4f3a6cbe55f24f8 221 ProSitePatterns PS00474 Ribosomal protein L3 signature. 108 131 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site RPIC12D_RS14760 6162b84052a40b4cb4f3a6cbe55f24f8 221 PANTHER PTHR11229 1 219 1.3E-109 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS16815 9baeb4af922ad14030f818d422d2c339 218 Pfam PF01810 LysE type translocator 19 215 2.9E-40 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS16815 9baeb4af922ad14030f818d422d2c339 218 PANTHER PTHR30086 4 215 4.5E-69 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS16815 9baeb4af922ad14030f818d422d2c339 218 PANTHER PTHR30086:SF2 4 215 4.5E-69 T 22-04-2016 RPIC12D_RS16815 9baeb4af922ad14030f818d422d2c339 218 PIRSF PIRSF006324 3 218 1.0E-62 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS01255 ddc5e478cec573039abd5d937830fbc8 225 Pfam PF00872 Transposase, Mutator family 30 225 9.0E-59 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS01255 ddc5e478cec573039abd5d937830fbc8 225 PANTHER PTHR33217 22 225 2.4E-73 T 22-04-2016 RPIC12D_RS16320 6344d3be011d2ddc37fb2ae39db8f40c 172 PANTHER PTHR11717:SF18 1 171 1.6E-31 T 22-04-2016 RPIC12D_RS16320 6344d3be011d2ddc37fb2ae39db8f40c 172 SMART SM00226 11 152 2.5E-32 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RPIC12D_RS16320 6344d3be011d2ddc37fb2ae39db8f40c 172 SUPERFAMILY SSF52788 11 152 8.11E-36 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RPIC12D_RS16320 6344d3be011d2ddc37fb2ae39db8f40c 172 Gene3D G3DSA:3.40.50.270 10 150 4.8E-38 T 22-04-2016 RPIC12D_RS16320 6344d3be011d2ddc37fb2ae39db8f40c 172 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 13 150 1.5E-15 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RPIC12D_RS16320 6344d3be011d2ddc37fb2ae39db8f40c 172 PANTHER PTHR11717 1 171 1.6E-31 T 22-04-2016 RPIC12D_RS01275 b72d6ded8be14ae1074b1aca6e7805e1 283 Gene3D G3DSA:1.10.3720.10 83 278 5.0E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS01275 b72d6ded8be14ae1074b1aca6e7805e1 283 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 75 269 3.5E-74 T 22-04-2016 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 RPIC12D_RS01275 b72d6ded8be14ae1074b1aca6e7805e1 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 275 2.1E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS01275 b72d6ded8be14ae1074b1aca6e7805e1 283 PANTHER PTHR30151:SF7 34 280 2.8E-89 T 22-04-2016 RPIC12D_RS01275 b72d6ded8be14ae1074b1aca6e7805e1 283 SUPERFAMILY SSF161098 86 269 2.62E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS01275 b72d6ded8be14ae1074b1aca6e7805e1 283 PANTHER PTHR30151 34 280 2.8E-89 T 22-04-2016 RPIC12D_RS07725 05293f9345e7b80ed1ebd9ec25afad1e 447 Gene3D G3DSA:1.10.3120.10 214 402 5.6E-61 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RPIC12D_RS07725 05293f9345e7b80ed1ebd9ec25afad1e 447 Pfam PF05697 Bacterial trigger factor protein (TF) 3 142 1.7E-33 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RPIC12D_RS07725 05293f9345e7b80ed1ebd9ec25afad1e 447 TIGRFAM TIGR00115 tig: trigger factor 11 424 2.9E-126 T 22-04-2016 IPR005215 Trigger factor GO:0015031 RPIC12D_RS07725 05293f9345e7b80ed1ebd9ec25afad1e 447 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 273 425 2.7E-39 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RPIC12D_RS07725 05293f9345e7b80ed1ebd9ec25afad1e 447 SUPERFAMILY SSF102735 3 130 3.92E-30 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RPIC12D_RS07725 05293f9345e7b80ed1ebd9ec25afad1e 447 SUPERFAMILY SSF109998 258 441 6.18E-50 T 22-04-2016 IPR027304 Trigger factor/SurA domain RPIC12D_RS07725 05293f9345e7b80ed1ebd9ec25afad1e 447 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 167 247 1.6E-14 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RPIC12D_RS07725 05293f9345e7b80ed1ebd9ec25afad1e 447 PANTHER PTHR30560:SF3 1 443 3.4E-107 T 22-04-2016 RPIC12D_RS07725 05293f9345e7b80ed1ebd9ec25afad1e 447 Gene3D G3DSA:3.30.70.1050 3 118 1.0E-29 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RPIC12D_RS07725 05293f9345e7b80ed1ebd9ec25afad1e 447 PIRSF PIRSF003095 1 446 8.2E-129 T 22-04-2016 IPR005215 Trigger factor GO:0015031 RPIC12D_RS07725 05293f9345e7b80ed1ebd9ec25afad1e 447 Hamap MF_00303 Trigger factor [tig]. 1 431 20.159 T 22-04-2016 IPR005215 Trigger factor GO:0015031 RPIC12D_RS07725 05293f9345e7b80ed1ebd9ec25afad1e 447 SUPERFAMILY SSF54534 100 251 7.27E-30 T 22-04-2016 RPIC12D_RS07725 05293f9345e7b80ed1ebd9ec25afad1e 447 PANTHER PTHR30560 1 443 3.4E-107 T 22-04-2016 RPIC12D_RS09885 05c42c6094cd0f5ce60e646b2688aedf 201 PANTHER PTHR11067 1 196 1.2E-73 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RPIC12D_RS09885 05c42c6094cd0f5ce60e646b2688aedf 201 Pfam PF01725 Ham1 family 4 193 8.3E-54 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RPIC12D_RS09885 05c42c6094cd0f5ce60e646b2688aedf 201 Gene3D G3DSA:3.90.950.10 1 197 7.2E-75 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RPIC12D_RS09885 05c42c6094cd0f5ce60e646b2688aedf 201 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 195 1.8E-53 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RPIC12D_RS09885 05c42c6094cd0f5ce60e646b2688aedf 201 SUPERFAMILY SSF52972 1 196 4.71E-69 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RPIC12D_RS09885 05c42c6094cd0f5ce60e646b2688aedf 201 PANTHER PTHR11067:SF9 1 196 1.2E-73 T 22-04-2016 RPIC12D_RS09885 05c42c6094cd0f5ce60e646b2688aedf 201 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 197 48.772 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RPIC12D_RS17030 73fa1ed5891e965a1910d4736b83d429 281 PANTHER PTHR12725 12 218 1.4E-16 T 22-04-2016 RPIC12D_RS17030 73fa1ed5891e965a1910d4736b83d429 281 SUPERFAMILY SSF56784 31 222 1.12E-26 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS17030 73fa1ed5891e965a1910d4736b83d429 281 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 32 215 3.4E-15 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS17030 73fa1ed5891e965a1910d4736b83d429 281 Gene3D G3DSA:3.40.50.1000 32 228 3.5E-18 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS17030 73fa1ed5891e965a1910d4736b83d429 281 Pfam PF13419 Haloacid dehalogenase-like hydrolase 33 215 5.1E-8 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS16050 5c6cb9566748e61bdc41780e4d6d4416 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 2 67 3.2E-31 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor RPIC12D_RS16050 5c6cb9566748e61bdc41780e4d6d4416 71 PANTHER PTHR40613:SF1 1 71 8.2E-23 T 22-04-2016 RPIC12D_RS16050 5c6cb9566748e61bdc41780e4d6d4416 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 69 3.0E-26 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor RPIC12D_RS16050 5c6cb9566748e61bdc41780e4d6d4416 71 PANTHER PTHR40613 1 71 8.2E-23 T 22-04-2016 RPIC12D_RS15255 6c9fc5b40f985d0a4401a85f699e7a7e 162 SMART SM00344 6 120 1.8E-41 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RPIC12D_RS15255 6c9fc5b40f985d0a4401a85f699e7a7e 162 PANTHER PTHR30154 1 160 4.7E-61 T 22-04-2016 RPIC12D_RS15255 6c9fc5b40f985d0a4401a85f699e7a7e 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 2.4E-22 T 22-04-2016 RPIC12D_RS15255 6c9fc5b40f985d0a4401a85f699e7a7e 162 Pfam PF01037 Lrp/AsnC ligand binding domain 73 151 8.9E-25 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC12D_RS15255 6c9fc5b40f985d0a4401a85f699e7a7e 162 PANTHER PTHR30154:SF28 1 160 4.7E-61 T 22-04-2016 RPIC12D_RS15255 6c9fc5b40f985d0a4401a85f699e7a7e 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 2.23E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS15255 6c9fc5b40f985d0a4401a85f699e7a7e 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 2.23E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS15255 6c9fc5b40f985d0a4401a85f699e7a7e 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 2.23E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS15255 6c9fc5b40f985d0a4401a85f699e7a7e 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RPIC12D_RS15255 6c9fc5b40f985d0a4401a85f699e7a7e 162 SUPERFAMILY SSF46785 5 65 5.68E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS15255 6c9fc5b40f985d0a4401a85f699e7a7e 162 SUPERFAMILY SSF54909 66 160 2.01E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC12D_RS15255 6c9fc5b40f985d0a4401a85f699e7a7e 162 Gene3D G3DSA:1.10.10.10 3 57 6.9E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS15255 6c9fc5b40f985d0a4401a85f699e7a7e 162 Gene3D G3DSA:3.30.70.920 59 148 1.7E-33 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC12D_RS12305 214b0469cf2109b86bbd7ffdf619b377 171 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 88 99 - T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RPIC12D_RS12305 214b0469cf2109b86bbd7ffdf619b377 171 SUPERFAMILY SSF55083 4 144 1.57E-47 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RPIC12D_RS12305 214b0469cf2109b86bbd7ffdf619b377 171 PANTHER PTHR20941 3 142 5.6E-53 T 22-04-2016 RPIC12D_RS12305 214b0469cf2109b86bbd7ffdf619b377 171 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 133 4.4E-36 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RPIC12D_RS12305 214b0469cf2109b86bbd7ffdf619b377 171 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 133 1.2E-33 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RPIC12D_RS12305 214b0469cf2109b86bbd7ffdf619b377 171 Gene3D G3DSA:3.30.70.560 4 153 3.5E-50 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RPIC12D_RS17200 a859666ce750c29b87316a52bb8b3ddd 129 Gene3D G3DSA:3.90.79.10 8 127 3.3E-20 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS17200 a859666ce750c29b87316a52bb8b3ddd 129 Pfam PF00293 NUDIX domain 6 118 1.5E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC12D_RS17200 a859666ce750c29b87316a52bb8b3ddd 129 PANTHER PTHR22769 10 118 7.4E-16 T 22-04-2016 RPIC12D_RS17200 a859666ce750c29b87316a52bb8b3ddd 129 SUPERFAMILY SSF55811 10 120 9.75E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS17200 a859666ce750c29b87316a52bb8b3ddd 129 PRINTS PR00502 NUDIX hydrolase family signature 29 43 1.2E-5 T 22-04-2016 IPR020476 NUDIX hydrolase RPIC12D_RS17200 a859666ce750c29b87316a52bb8b3ddd 129 PRINTS PR00502 NUDIX hydrolase family signature 43 58 1.2E-5 T 22-04-2016 IPR020476 NUDIX hydrolase RPIC12D_RS17200 a859666ce750c29b87316a52bb8b3ddd 129 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RPIC12D_RS00670 568e0fba146e40b86302b2610cb92c4d 611 PANTHER PTHR39559 7 594 1.2E-149 T 22-04-2016 RPIC12D_RS00670 568e0fba146e40b86302b2610cb92c4d 611 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 16 584 6.7E-255 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RPIC12D_RS00670 568e0fba146e40b86302b2610cb92c4d 611 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 8 588 44.722 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RPIC12D_RS00670 568e0fba146e40b86302b2610cb92c4d 611 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 16 591 0.0 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RPIC12D_RS00670 568e0fba146e40b86302b2610cb92c4d 611 PIRSF PIRSF000719 7 593 2.1E-283 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RPIC12D_RS05840 533c6241ae30f73520978c167e062fd7 387 Pfam PF13393 Histidyl-tRNA synthetase 11 314 3.1E-121 T 22-04-2016 RPIC12D_RS05840 533c6241ae30f73520978c167e062fd7 387 PANTHER PTHR11476 13 314 2.0E-50 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RPIC12D_RS05840 533c6241ae30f73520978c167e062fd7 387 SUPERFAMILY SSF55681 5 311 9.73E-58 T 22-04-2016 RPIC12D_RS05840 533c6241ae30f73520978c167e062fd7 387 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 17 365 36.733 T 22-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 RPIC12D_RS05840 533c6241ae30f73520978c167e062fd7 387 Gene3D G3DSA:3.30.930.10 18 314 5.7E-66 T 22-04-2016 RPIC12D_RS05840 533c6241ae30f73520978c167e062fd7 387 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 13 315 2.5E-86 T 22-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 RPIC12D_RS05840 533c6241ae30f73520978c167e062fd7 387 PANTHER PTHR11476:SF5 13 314 2.0E-50 T 22-04-2016 RPIC12D_RS07180 9ff6c0974f11682082a392cd0829a6b1 439 Gene3D G3DSA:1.20.1250.20 254 428 3.2E-20 T 22-04-2016 RPIC12D_RS07180 9ff6c0974f11682082a392cd0829a6b1 439 SUPERFAMILY SSF103473 8 430 7.06E-82 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS07180 9ff6c0974f11682082a392cd0829a6b1 439 PANTHER PTHR24064:SF234 20 439 4.3E-74 T 22-04-2016 RPIC12D_RS07180 9ff6c0974f11682082a392cd0829a6b1 439 PANTHER PTHR24064 20 439 4.3E-74 T 22-04-2016 RPIC12D_RS07180 9ff6c0974f11682082a392cd0829a6b1 439 Pfam PF07690 Major Facilitator Superfamily 27 350 2.8E-40 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS07180 9ff6c0974f11682082a392cd0829a6b1 439 Gene3D G3DSA:1.20.1250.20 19 199 5.0E-37 T 22-04-2016 RPIC12D_RS00035 c29911584755513138b52e10b924b5f0 416 ProSitePatterns PS01007 Transposases, Mutator family, signature. 244 268 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS00035 c29911584755513138b52e10b924b5f0 416 PANTHER PTHR33217 11 412 1.3E-149 T 22-04-2016 RPIC12D_RS00035 c29911584755513138b52e10b924b5f0 416 Pfam PF00872 Transposase, Mutator family 31 391 8.1E-116 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS03810 8a194cf834eb81abf6f98a8ce2063ad7 269 PANTHER PTHR30028:SF0 8 262 9.1E-82 T 22-04-2016 IPR005226 UPF0014 family RPIC12D_RS03810 8a194cf834eb81abf6f98a8ce2063ad7 269 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 13 257 2.3E-62 T 22-04-2016 IPR005226 UPF0014 family RPIC12D_RS03810 8a194cf834eb81abf6f98a8ce2063ad7 269 PANTHER PTHR30028 8 262 9.1E-82 T 22-04-2016 RPIC12D_RS03810 8a194cf834eb81abf6f98a8ce2063ad7 269 Pfam PF03649 Uncharacterised protein family (UPF0014) 11 251 1.8E-85 T 22-04-2016 IPR005226 UPF0014 family RPIC12D_RS05675 f0c2fe9495e48ef8ce4a01913b6c0d49 115 Gene3D G3DSA:3.30.1310.10 1 115 3.6E-46 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RPIC12D_RS05675 f0c2fe9495e48ef8ce4a01913b6c0d49 115 PANTHER PTHR33449 1 115 8.1E-42 T 22-04-2016 RPIC12D_RS05675 f0c2fe9495e48ef8ce4a01913b6c0d49 115 Pfam PF02575 YbaB/EbfC DNA-binding family 10 100 7.1E-35 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RPIC12D_RS05675 f0c2fe9495e48ef8ce4a01913b6c0d49 115 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 106 2.2E-29 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RPIC12D_RS05675 f0c2fe9495e48ef8ce4a01913b6c0d49 115 PIRSF PIRSF004555 2 115 9.9E-37 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RPIC12D_RS05675 f0c2fe9495e48ef8ce4a01913b6c0d49 115 SUPERFAMILY SSF82607 7 99 1.07E-32 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RPIC12D_RS05675 f0c2fe9495e48ef8ce4a01913b6c0d49 115 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 99 22.486 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RPIC12D_RS03770 1d9a0c3a8d34f314d4ae128629742c0d 329 Gene3D G3DSA:3.40.1190.20 2 313 3.1E-84 T 22-04-2016 IPR029056 Ribokinase-like RPIC12D_RS03770 1d9a0c3a8d34f314d4ae128629742c0d 329 SUPERFAMILY SSF53613 4 310 3.9E-77 T 22-04-2016 IPR029056 Ribokinase-like RPIC12D_RS03770 1d9a0c3a8d34f314d4ae128629742c0d 329 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RPIC12D_RS03770 1d9a0c3a8d34f314d4ae128629742c0d 329 PANTHER PTHR10584 7 313 3.6E-105 T 22-04-2016 RPIC12D_RS03770 1d9a0c3a8d34f314d4ae128629742c0d 329 PANTHER PTHR10584:SF186 7 313 3.6E-105 T 22-04-2016 RPIC12D_RS03770 1d9a0c3a8d34f314d4ae128629742c0d 329 Pfam PF00294 pfkB family carbohydrate kinase 6 306 2.3E-56 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB RPIC12D_RS14515 d48190a6402b2aa634cd53bf2cbe7b74 179 Pfam PF01202 Shikimate kinase 1 157 8.5E-53 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS14515 d48190a6402b2aa634cd53bf2cbe7b74 179 ProSitePatterns PS01128 Shikimate kinase signature. 48 73 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS14515 d48190a6402b2aa634cd53bf2cbe7b74 179 PRINTS PR01100 Shikimate kinase family signature 47 55 4.2E-12 T 22-04-2016 RPIC12D_RS14515 d48190a6402b2aa634cd53bf2cbe7b74 179 PRINTS PR01100 Shikimate kinase family signature 65 74 4.2E-12 T 22-04-2016 RPIC12D_RS14515 d48190a6402b2aa634cd53bf2cbe7b74 179 PRINTS PR01100 Shikimate kinase family signature 86 103 4.2E-12 T 22-04-2016 RPIC12D_RS14515 d48190a6402b2aa634cd53bf2cbe7b74 179 PRINTS PR01100 Shikimate kinase family signature 19 32 4.2E-12 T 22-04-2016 RPIC12D_RS14515 d48190a6402b2aa634cd53bf2cbe7b74 179 PANTHER PTHR21087 1 154 4.5E-54 T 22-04-2016 RPIC12D_RS14515 d48190a6402b2aa634cd53bf2cbe7b74 179 SUPERFAMILY SSF52540 1 156 3.18E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14515 d48190a6402b2aa634cd53bf2cbe7b74 179 Hamap MF_00109 Shikimate kinase [aroK]. 1 158 25.111 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC12D_RS14515 d48190a6402b2aa634cd53bf2cbe7b74 179 Gene3D G3DSA:3.40.50.300 1 161 9.4E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15610 1764e57b8d63b8560c5494c7180a2dbc 933 Gene3D G3DSA:3.40.1360.10 221 347 1.6E-5 T 22-04-2016 RPIC12D_RS15610 1764e57b8d63b8560c5494c7180a2dbc 933 Gene3D G3DSA:3.90.580.10 10 102 3.3E-10 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RPIC12D_RS15610 1764e57b8d63b8560c5494c7180a2dbc 933 SUPERFAMILY SSF57783 9 104 7.99E-16 T 22-04-2016 RPIC12D_RS15610 1764e57b8d63b8560c5494c7180a2dbc 933 Pfam PF13362 Toprim domain 228 335 5.4E-23 T 22-04-2016 IPR006171 Toprim domain RPIC12D_RS03030 73f0e55100dc602ceb33b0acb00ec29b 197 Pfam PF07273 Protein of unknown function (DUF1439) 46 183 6.3E-19 T 22-04-2016 IPR010835 Protein of unknown function DUF1439 RPIC12D_RS16830 c259c78ce80749fadab32349fc9134d6 171 PANTHER PTHR10458 1 168 6.4E-87 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC12D_RS16830 c259c78ce80749fadab32349fc9134d6 171 PIRSF PIRSF004749 1 171 4.6E-56 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC12D_RS16830 c259c78ce80749fadab32349fc9134d6 171 Gene3D G3DSA:3.90.45.10 5 165 4.4E-65 T 22-04-2016 IPR023635 Peptide deformylase RPIC12D_RS16830 c259c78ce80749fadab32349fc9134d6 171 PANTHER PTHR10458:SF10 1 168 6.4E-87 T 22-04-2016 RPIC12D_RS16830 c259c78ce80749fadab32349fc9134d6 171 Pfam PF01327 Polypeptide deformylase 4 152 4.6E-50 T 22-04-2016 IPR023635 Peptide deformylase RPIC12D_RS16830 c259c78ce80749fadab32349fc9134d6 171 SUPERFAMILY SSF56420 2 165 1.13E-61 T 22-04-2016 IPR023635 Peptide deformylase RPIC12D_RS16830 c259c78ce80749fadab32349fc9134d6 171 PRINTS PR01576 Peptide deformylase signature 121 150 7.9E-36 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC12D_RS16830 c259c78ce80749fadab32349fc9134d6 171 PRINTS PR01576 Peptide deformylase signature 90 101 7.9E-36 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC12D_RS16830 c259c78ce80749fadab32349fc9134d6 171 PRINTS PR01576 Peptide deformylase signature 102 120 7.9E-36 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC12D_RS16830 c259c78ce80749fadab32349fc9134d6 171 PRINTS PR01576 Peptide deformylase signature 33 62 7.9E-36 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC12D_RS16830 c259c78ce80749fadab32349fc9134d6 171 Hamap MF_00163 Peptide deformylase [def]. 2 163 30.02 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC12D_RS16830 c259c78ce80749fadab32349fc9134d6 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 2.3E-55 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC12D_RS07925 042bf745281e11c03eac9aeb7a1db8bd 285 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 76 280 7.6E-65 T 22-04-2016 RPIC12D_RS07925 042bf745281e11c03eac9aeb7a1db8bd 285 Pfam PF13284 Domain of unknown function (DUF4072) 3 52 4.3E-12 T 22-04-2016 IPR025138 Domain of unknown function DUF4072 RPIC12D_RS07925 042bf745281e11c03eac9aeb7a1db8bd 285 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 78 247 3.4E-28 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 RPIC12D_RS07925 042bf745281e11c03eac9aeb7a1db8bd 285 Gene3D G3DSA:3.40.50.1000 139 269 7.8E-40 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS07925 042bf745281e11c03eac9aeb7a1db8bd 285 Pfam PF12710 haloacid dehalogenase-like hydrolase 80 247 1.2E-17 T 22-04-2016 RPIC12D_RS07925 042bf745281e11c03eac9aeb7a1db8bd 285 PANTHER PTHR10000:SF7 76 279 1.9E-74 T 22-04-2016 RPIC12D_RS07925 042bf745281e11c03eac9aeb7a1db8bd 285 PANTHER PTHR10000 76 279 1.9E-74 T 22-04-2016 RPIC12D_RS07925 042bf745281e11c03eac9aeb7a1db8bd 285 SUPERFAMILY SSF56784 75 282 1.13E-45 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS07925 042bf745281e11c03eac9aeb7a1db8bd 285 Gene3D G3DSA:1.10.150.210 87 138 4.9E-25 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 RPIC12D_RS14600 199ad3b7ea242032854fff21cfc4ecbf 219 PIRSF PIRSF000005 1 219 6.9E-66 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 RPIC12D_RS14600 199ad3b7ea242032854fff21cfc4ecbf 219 PANTHER PTHR33751 50 219 2.0E-46 T 22-04-2016 RPIC12D_RS14600 199ad3b7ea242032854fff21cfc4ecbf 219 SUPERFAMILY SSF46626 31 117 5.32E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS14600 199ad3b7ea242032854fff21cfc4ecbf 219 Pfam PF00034 Cytochrome c 34 117 6.7E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS14600 199ad3b7ea242032854fff21cfc4ecbf 219 Pfam PF00034 Cytochrome c 136 217 1.5E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS14600 199ad3b7ea242032854fff21cfc4ecbf 219 SUPERFAMILY SSF46626 131 217 1.31E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS14600 199ad3b7ea242032854fff21cfc4ecbf 219 Gene3D G3DSA:1.10.760.10 143 218 8.9E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS14600 199ad3b7ea242032854fff21cfc4ecbf 219 Gene3D G3DSA:1.10.760.10 55 120 2.1E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS14600 199ad3b7ea242032854fff21cfc4ecbf 219 Gene3D G3DSA:1.10.760.10 21 54 8.3E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS14600 199ad3b7ea242032854fff21cfc4ecbf 219 PANTHER PTHR33751:SF3 50 219 2.0E-46 T 22-04-2016 RPIC12D_RS11750 42909629d9c2d85597db264a07b7690a 108 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 7 103 28.651 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS RPIC12D_RS11750 42909629d9c2d85597db264a07b7690a 108 PANTHER PTHR33473 18 106 4.4E-34 T 22-04-2016 RPIC12D_RS11750 42909629d9c2d85597db264a07b7690a 108 SUPERFAMILY SSF54736 24 107 3.4E-32 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RPIC12D_RS11750 42909629d9c2d85597db264a07b7690a 108 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 25 103 1.7E-34 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 RPIC12D_RS11750 42909629d9c2d85597db264a07b7690a 108 Gene3D G3DSA:3.30.1390.10 10 108 2.9E-42 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RPIC12D_RS05865 3258c75a78b67ee62cdb9774d413b89e 250 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 79 1.0E-17 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RPIC12D_RS05865 3258c75a78b67ee62cdb9774d413b89e 250 SUPERFAMILY SSF55315 2 78 1.18E-17 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like RPIC12D_RS05865 3258c75a78b67ee62cdb9774d413b89e 250 Pfam PF00588 SpoU rRNA Methylase family 97 237 9.5E-41 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RPIC12D_RS05865 3258c75a78b67ee62cdb9774d413b89e 250 PANTHER PTHR12029 6 243 1.9E-71 T 22-04-2016 RPIC12D_RS05865 3258c75a78b67ee62cdb9774d413b89e 250 SUPERFAMILY SSF75217 87 244 3.4E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RPIC12D_RS05865 3258c75a78b67ee62cdb9774d413b89e 250 SMART SM00967 6 82 1.3E-18 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RPIC12D_RS05865 3258c75a78b67ee62cdb9774d413b89e 250 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 243 4.0E-75 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 RPIC12D_RS05865 3258c75a78b67ee62cdb9774d413b89e 250 Gene3D G3DSA:3.40.1280.10 94 245 6.6E-55 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIC12D_RS05865 3258c75a78b67ee62cdb9774d413b89e 250 Gene3D G3DSA:3.30.1330.30 1 77 1.7E-21 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like RPIC12D_RS05865 3258c75a78b67ee62cdb9774d413b89e 250 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 244 45.061 T 22-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB RPIC12D_RS08895 d626fa3b17f0c4d979f8745ba59dd2b6 196 Gene3D G3DSA:1.20.1290.10 5 102 4.8E-38 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS08895 d626fa3b17f0c4d979f8745ba59dd2b6 196 Gene3D G3DSA:1.20.1290.10 154 191 4.8E-38 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS08895 d626fa3b17f0c4d979f8745ba59dd2b6 196 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 19 193 4.9E-69 T 22-04-2016 IPR010195 Uncharacterised peroxidase-related RPIC12D_RS08895 d626fa3b17f0c4d979f8745ba59dd2b6 196 PANTHER PTHR35446:SF2 8 190 5.8E-40 T 22-04-2016 RPIC12D_RS08895 d626fa3b17f0c4d979f8745ba59dd2b6 196 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 75 104 3.0E-10 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS08895 d626fa3b17f0c4d979f8745ba59dd2b6 196 Pfam PF02627 Carboxymuconolactone decarboxylase family 57 134 8.5E-14 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS08895 d626fa3b17f0c4d979f8745ba59dd2b6 196 PANTHER PTHR35446 8 190 5.8E-40 T 22-04-2016 RPIC12D_RS08895 d626fa3b17f0c4d979f8745ba59dd2b6 196 SUPERFAMILY SSF69118 13 191 5.88E-47 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS08830 efc5a65b4d4ab16ad864b754fa3014f2 284 SUPERFAMILY SSF55811 97 267 5.82E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS08830 efc5a65b4d4ab16ad864b754fa3014f2 284 PANTHER PTHR13622:SF8 64 234 2.4E-35 T 22-04-2016 RPIC12D_RS08830 efc5a65b4d4ab16ad864b754fa3014f2 284 PANTHER PTHR13622 64 234 2.4E-35 T 22-04-2016 RPIC12D_RS08830 efc5a65b4d4ab16ad864b754fa3014f2 284 Pfam PF00293 NUDIX domain 135 245 9.5E-7 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC12D_RS08830 efc5a65b4d4ab16ad864b754fa3014f2 284 Pfam PF15916 Domain of unknown function (DUF4743) 16 121 1.6E-27 T 22-04-2016 IPR031804 Domain of unknown function DUF4743 RPIC12D_RS08830 efc5a65b4d4ab16ad864b754fa3014f2 284 Gene3D G3DSA:3.90.79.10 89 268 6.5E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS01000 daf5941d37552e3b0164c0b1367199a7 630 Gene3D G3DSA:3.30.420.10 230 425 7.1E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS01000 daf5941d37552e3b0164c0b1367199a7 630 Gene3D G3DSA:1.10.10.60 145 208 2.3E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS01000 daf5941d37552e3b0164c0b1367199a7 630 Pfam PF00665 Integrase core domain 230 366 1.9E-16 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC12D_RS01000 daf5941d37552e3b0164c0b1367199a7 630 SUPERFAMILY SSF46689 97 195 4.84E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS01000 daf5941d37552e3b0164c0b1367199a7 630 Pfam PF09299 Mu transposase, C-terminal 452 515 1.4E-12 T 22-04-2016 IPR015378 Transposase-like, Mu, C-terminal RPIC12D_RS01000 daf5941d37552e3b0164c0b1367199a7 630 SUPERFAMILY SSF53098 222 423 1.52E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS01000 daf5941d37552e3b0164c0b1367199a7 630 Pfam PF13518 Helix-turn-helix domain 82 137 1.1E-10 T 22-04-2016 RPIC12D_RS05895 1fc894b8c386681524ec6423a96fc7fa 1333 PANTHER PTHR18934:SF109 741 873 0.0 T 22-04-2016 RPIC12D_RS05895 1fc894b8c386681524ec6423a96fc7fa 1333 PANTHER PTHR18934:SF109 69 706 0.0 T 22-04-2016 RPIC12D_RS05895 1fc894b8c386681524ec6423a96fc7fa 1333 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 600 699 1.3E-15 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 RPIC12D_RS05895 1fc894b8c386681524ec6423a96fc7fa 1333 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 45 1329 0.0 T 22-04-2016 IPR010222 RNA helicase HrpA GO:0004004 RPIC12D_RS05895 1fc894b8c386681524ec6423a96fc7fa 1333 SMART SM00847 466 556 9.2E-38 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 RPIC12D_RS05895 1fc894b8c386681524ec6423a96fc7fa 1333 Pfam PF11898 Domain of unknown function (DUF3418) 714 1329 2.7E-219 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal RPIC12D_RS05895 1fc894b8c386681524ec6423a96fc7fa 1333 Pfam PF00271 Helicase conserved C-terminal domain 287 405 2.4E-10 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS05895 1fc894b8c386681524ec6423a96fc7fa 1333 SUPERFAMILY SSF52540 68 576 3.02E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05895 1fc894b8c386681524ec6423a96fc7fa 1333 Gene3D G3DSA:3.40.50.300 71 232 7.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05895 1fc894b8c386681524ec6423a96fc7fa 1333 Gene3D G3DSA:3.40.50.300 269 418 2.7E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05895 1fc894b8c386681524ec6423a96fc7fa 1333 Pfam PF00270 DEAD/DEAH box helicase 79 231 5.0E-6 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIC12D_RS05895 1fc894b8c386681524ec6423a96fc7fa 1333 PANTHER PTHR18934 741 873 0.0 T 22-04-2016 RPIC12D_RS05895 1fc894b8c386681524ec6423a96fc7fa 1333 PANTHER PTHR18934 69 706 0.0 T 22-04-2016 RPIC12D_RS05895 1fc894b8c386681524ec6423a96fc7fa 1333 SMART SM00490 306 406 1.4E-15 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC12D_RS05895 1fc894b8c386681524ec6423a96fc7fa 1333 Pfam PF04408 Helicase associated domain (HA2) 469 540 1.1E-20 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 RPIC12D_RS05895 1fc894b8c386681524ec6423a96fc7fa 1333 SMART SM00382 86 372 3.1E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS05895 1fc894b8c386681524ec6423a96fc7fa 1333 SMART SM00487 69 261 2.3E-25 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC12D_RS17155 bb6163d479d1a58d30f691e72bd6faa0 297 SUPERFAMILY SSF52151 10 130 1.33E-25 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC12D_RS17155 bb6163d479d1a58d30f691e72bd6faa0 297 SUPERFAMILY SSF52151 165 263 1.33E-25 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC12D_RS17155 bb6163d479d1a58d30f691e72bd6faa0 297 Pfam PF01734 Patatin-like phospholipase 9 213 7.5E-24 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 SUPERFAMILY SSF55785 64 166 2.93E-6 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 Gene3D G3DSA:3.30.450.20 50 174 1.5E-11 T 22-04-2016 RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 SUPERFAMILY SSF47384 192 268 1.61E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 Gene3D G3DSA:3.30.565.10 271 433 4.4E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 SMART SM00387 312 435 8.3E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 PANTHER PTHR24423 201 612 4.0E-164 T 22-04-2016 RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 PANTHER PTHR24423 121 180 4.0E-164 T 22-04-2016 RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 Gene3D G3DSA:1.10.287.130 190 231 3.3E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 SUPERFAMILY SSF52172 604 720 3.27E-24 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 Gene3D G3DSA:3.40.50.2300 605 721 1.3E-23 T 22-04-2016 RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 Gene3D G3DSA:3.40.50.2300 455 579 7.6E-31 T 22-04-2016 RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 SUPERFAMILY SSF55874 261 433 3.67E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 433 9.9E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 432 9.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 9.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 392 9.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 9.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 PANTHER PTHR24423:SF438 201 612 4.0E-164 T 22-04-2016 RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 PANTHER PTHR24423:SF438 121 180 4.0E-164 T 22-04-2016 RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 Pfam PF08448 PAS fold 65 159 1.1E-5 T 22-04-2016 IPR013656 PAS fold-4 RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 Pfam PF00072 Response regulator receiver domain 608 715 6.6E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 Pfam PF00072 Response regulator receiver domain 459 570 1.2E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 SUPERFAMILY SSF52172 457 580 1.42E-26 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 SMART SM00448 457 570 4.1E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS00120 ee4c4dd35e6458092b87e3b2c137beeb 734 SMART SM00448 606 715 4.8E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS10695 96a19e8ce74c188045255331281c3a14 207 SUPERFAMILY SSF46626 5 184 1.38E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS10695 96a19e8ce74c188045255331281c3a14 207 Gene3D G3DSA:1.10.760.10 26 184 3.4E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS10695 96a19e8ce74c188045255331281c3a14 207 PANTHER PTHR10422:SF23 38 156 1.5E-27 T 22-04-2016 RPIC12D_RS10695 96a19e8ce74c188045255331281c3a14 207 PANTHER PTHR10422 38 156 1.5E-27 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS10695 96a19e8ce74c188045255331281c3a14 207 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 8 145 2.4E-37 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO RPIC12D_RS09325 6b2e56623eaff1faeb00e7819f0658db 145 SUPERFAMILY SSF54637 10 139 6.26E-23 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS09325 6b2e56623eaff1faeb00e7819f0658db 145 Gene3D G3DSA:3.10.129.10 1 143 2.8E-49 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS09325 6b2e56623eaff1faeb00e7819f0658db 145 Pfam PF03061 Thioesterase superfamily 53 129 3.3E-13 T 22-04-2016 IPR006683 Thioesterase domain RPIC12D_RS09325 6b2e56623eaff1faeb00e7819f0658db 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 23 136 6.9E-10 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain RPIC12D_RS09325 6b2e56623eaff1faeb00e7819f0658db 145 PANTHER PTHR21660 39 141 3.1E-13 T 22-04-2016 RPIC12D_RS01570 87415fe63ac8d5abfc9a02a9199444b2 287 SUPERFAMILY SSF88713 54 272 3.78E-52 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIC12D_RS01570 87415fe63ac8d5abfc9a02a9199444b2 287 Pfam PF01522 Polysaccharide deacetylase 79 198 2.7E-29 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIC12D_RS01570 87415fe63ac8d5abfc9a02a9199444b2 287 Gene3D G3DSA:3.20.20.370 55 277 1.3E-48 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIC12D_RS01570 87415fe63ac8d5abfc9a02a9199444b2 287 PANTHER PTHR10587 66 257 3.1E-39 T 22-04-2016 RPIC12D_RS10010 60273fba4e7c43a3b3fecbb3d51a2c59 492 PANTHER PTHR30618 17 492 6.1E-213 T 22-04-2016 RPIC12D_RS10010 60273fba4e7c43a3b3fecbb3d51a2c59 492 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 28 476 7.8E-120 T 22-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 RPIC12D_RS10010 60273fba4e7c43a3b3fecbb3d51a2c59 492 PANTHER PTHR30618:SF0 17 492 6.1E-213 T 22-04-2016 RPIC12D_RS10010 60273fba4e7c43a3b3fecbb3d51a2c59 492 TIGRFAM TIGR00800 ncs1: NCS1 nucleoside transporter family 23 456 3.0E-115 T 22-04-2016 IPR012681 Nucleobase cation symporter-1, NCS1 GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS12240 58e9b44d13b3898138fec5b36e1a0bfd 156 Pfam PF03100 CcmE 3 130 4.8E-47 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 RPIC12D_RS12240 58e9b44d13b3898138fec5b36e1a0bfd 156 PANTHER PTHR34128 3 156 1.3E-52 T 22-04-2016 RPIC12D_RS12240 58e9b44d13b3898138fec5b36e1a0bfd 156 PANTHER PTHR34128:SF1 3 156 1.3E-52 T 22-04-2016 RPIC12D_RS12240 58e9b44d13b3898138fec5b36e1a0bfd 156 Gene3D G3DSA:2.40.50.140 26 124 5.0E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS12240 58e9b44d13b3898138fec5b36e1a0bfd 156 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 140 33.164 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 RPIC12D_RS12240 58e9b44d13b3898138fec5b36e1a0bfd 156 SUPERFAMILY SSF82093 29 135 1.7E-40 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 RPIC12D_RS19515 69f40d12674fd74c3515935f0e08d110 444 Pfam PF03445 Putative nucleotidyltransferase DUF294 257 388 8.5E-39 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 RPIC12D_RS19515 69f40d12674fd74c3515935f0e08d110 444 Pfam PF00571 CBS domain 183 232 9.2E-7 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS19515 69f40d12674fd74c3515935f0e08d110 444 SUPERFAMILY SSF51206 1 96 2.88E-9 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like RPIC12D_RS19515 69f40d12674fd74c3515935f0e08d110 444 Pfam PF00027 Cyclic nucleotide-binding domain 1 75 4.9E-8 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC12D_RS19515 69f40d12674fd74c3515935f0e08d110 444 SUPERFAMILY SSF54631 109 233 3.28E-19 T 22-04-2016 RPIC12D_RS19515 69f40d12674fd74c3515935f0e08d110 444 SMART SM00116 185 232 2.1E-5 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS19515 69f40d12674fd74c3515935f0e08d110 444 Gene3D G3DSA:3.10.580.10 110 233 2.5E-19 T 22-04-2016 RPIC12D_RS19515 69f40d12674fd74c3515935f0e08d110 444 Gene3D G3DSA:2.60.120.10 1 95 3.4E-6 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS15895 8988c0b857c589bf7e1a7a5a0b3c5a88 1326 Gene3D G3DSA:3.20.20.220 265 619 6.7E-119 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like RPIC12D_RS15895 8988c0b857c589bf7e1a7a5a0b3c5a88 1326 Pfam PF01619 Proline dehydrogenase 274 572 1.7E-98 T 22-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 RPIC12D_RS15895 8988c0b857c589bf7e1a7a5a0b3c5a88 1326 SUPERFAMILY SSF51730 266 621 5.49E-121 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like RPIC12D_RS15895 8988c0b857c589bf7e1a7a5a0b3c5a88 1326 PIRSF PIRSF000197 78 1326 0.0 T 22-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RPIC12D_RS15895 8988c0b857c589bf7e1a7a5a0b3c5a88 1326 Gene3D G3DSA:1.20.5.550 91 142 5.0E-24 T 22-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RPIC12D_RS15895 8988c0b857c589bf7e1a7a5a0b3c5a88 1326 Gene3D G3DSA:3.40.605.10 667 904 1.2E-67 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS15895 8988c0b857c589bf7e1a7a5a0b3c5a88 1326 SUPERFAMILY SSF47598 3 45 2.67E-9 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RPIC12D_RS15895 8988c0b857c589bf7e1a7a5a0b3c5a88 1326 SUPERFAMILY SSF53720 639 1117 8.12E-129 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS15895 8988c0b857c589bf7e1a7a5a0b3c5a88 1326 Pfam PF00171 Aldehyde dehydrogenase family 667 1113 1.7E-113 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS15895 8988c0b857c589bf7e1a7a5a0b3c5a88 1326 Gene3D G3DSA:3.40.309.10 905 1096 2.7E-45 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RPIC12D_RS15895 8988c0b857c589bf7e1a7a5a0b3c5a88 1326 Gene3D G3DSA:1.10.2060.10 148 264 3.7E-54 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RPIC12D_RS15895 8988c0b857c589bf7e1a7a5a0b3c5a88 1326 PANTHER PTHR11699:SF18 630 1114 6.0E-175 T 22-04-2016 RPIC12D_RS15895 8988c0b857c589bf7e1a7a5a0b3c5a88 1326 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 152 263 3.8E-46 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RPIC12D_RS15895 8988c0b857c589bf7e1a7a5a0b3c5a88 1326 SUPERFAMILY SSF81935 92 265 9.15E-65 T 22-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RPIC12D_RS15895 8988c0b857c589bf7e1a7a5a0b3c5a88 1326 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 917 928 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS15895 8988c0b857c589bf7e1a7a5a0b3c5a88 1326 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 614 1117 8.5E-236 T 22-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RPIC12D_RS15895 8988c0b857c589bf7e1a7a5a0b3c5a88 1326 PANTHER PTHR11699 630 1114 6.0E-175 T 22-04-2016 RPIC12D_RS04570 35da4b0d49c80df03a5305c4a6f078f6 396 SUPERFAMILY SSF53383 7 385 7.74E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS04570 35da4b0d49c80df03a5305c4a6f078f6 396 Pfam PF00155 Aminotransferase class I and II 56 377 1.4E-29 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC12D_RS04570 35da4b0d49c80df03a5305c4a6f078f6 396 Gene3D G3DSA:3.90.1150.10 268 385 1.6E-11 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS04570 35da4b0d49c80df03a5305c4a6f078f6 396 PANTHER PTHR11751 15 392 1.3E-128 T 22-04-2016 RPIC12D_RS04570 35da4b0d49c80df03a5305c4a6f078f6 396 PANTHER PTHR11751:SF294 15 392 1.3E-128 T 22-04-2016 RPIC12D_RS04570 35da4b0d49c80df03a5305c4a6f078f6 396 Gene3D G3DSA:3.40.640.10 60 267 1.9E-71 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS07780 7d65723ff3a6c38d8c096d98d86d6da5 350 Gene3D G3DSA:1.10.287.90 37 122 5.6E-32 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RPIC12D_RS07780 7d65723ff3a6c38d8c096d98d86d6da5 350 SUPERFAMILY SSF49503 139 297 3.04E-51 T 22-04-2016 IPR008972 Cupredoxin RPIC12D_RS07780 7d65723ff3a6c38d8c096d98d86d6da5 350 SUPERFAMILY SSF81464 38 126 2.78E-22 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RPIC12D_RS07780 7d65723ff3a6c38d8c096d98d86d6da5 350 Gene3D G3DSA:2.60.40.420 141 296 9.2E-42 T 22-04-2016 IPR008972 Cupredoxin RPIC12D_RS07780 7d65723ff3a6c38d8c096d98d86d6da5 350 PIRSF PIRSF000292 13 326 9.0E-124 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 RPIC12D_RS07780 7d65723ff3a6c38d8c096d98d86d6da5 350 PANTHER PTHR22888:SF13 30 284 2.0E-123 T 22-04-2016 RPIC12D_RS07780 7d65723ff3a6c38d8c096d98d86d6da5 350 PANTHER PTHR22888 30 284 2.0E-123 T 22-04-2016 RPIC12D_RS07780 7d65723ff3a6c38d8c096d98d86d6da5 350 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 23 256 6.9E-105 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 RPIC12D_RS07780 7d65723ff3a6c38d8c096d98d86d6da5 350 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 167 237 8.1E-9 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 RPIC12D_RS07780 7d65723ff3a6c38d8c096d98d86d6da5 350 Pfam PF06481 COX Aromatic Rich Motif 256 300 2.3E-18 T 22-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 RPIC12D_RS13295 d770f94880294633a6a5032608458517 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 4.1E-36 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS13295 d770f94880294633a6a5032608458517 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 4.1E-36 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS13295 d770f94880294633a6a5032608458517 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 4.1E-36 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS13295 d770f94880294633a6a5032608458517 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 4.1E-36 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS13295 d770f94880294633a6a5032608458517 364 SUPERFAMILY SSF82051 2 158 1.22E-55 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RPIC12D_RS13295 d770f94880294633a6a5032608458517 364 PIRSF PIRSF002401 1 359 2.8E-135 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RPIC12D_RS13295 d770f94880294633a6a5032608458517 364 SUPERFAMILY SSF52540 151 341 3.51E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13295 d770f94880294633a6a5032608458517 364 Pfam PF01926 50S ribosome-binding GTPase 161 285 5.1E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS13295 d770f94880294633a6a5032608458517 364 Pfam PF01018 GTP1/OBG 3 158 2.5E-59 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RPIC12D_RS13295 d770f94880294633a6a5032608458517 364 PANTHER PTHR11702:SF3 1 349 5.7E-165 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RPIC12D_RS13295 d770f94880294633a6a5032608458517 364 Hamap MF_01454 GTPase Obg [obg]. 2 334 47.413 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RPIC12D_RS13295 d770f94880294633a6a5032608458517 364 PANTHER PTHR11702 1 349 5.7E-165 T 22-04-2016 RPIC12D_RS13295 d770f94880294633a6a5032608458517 364 Gene3D G3DSA:2.70.210.12 2 156 5.0E-57 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RPIC12D_RS13295 d770f94880294633a6a5032608458517 364 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 RPIC12D_RS13295 d770f94880294633a6a5032608458517 364 Gene3D G3DSA:3.40.50.300 160 343 1.2E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13295 d770f94880294633a6a5032608458517 364 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 333 3.8E-143 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RPIC12D_RS09195 95449fa38839e41deb4018c5868253bf 136 PIRSF PIRSF000178 1 133 1.1E-31 T 22-04-2016 RPIC12D_RS09195 95449fa38839e41deb4018c5868253bf 136 PANTHER PTHR10978 3 129 5.5E-15 T 22-04-2016 RPIC12D_RS09195 95449fa38839e41deb4018c5868253bf 136 PANTHER PTHR10978:SF4 3 129 5.5E-15 T 22-04-2016 RPIC12D_RS09195 95449fa38839e41deb4018c5868253bf 136 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 8 130 1.3E-35 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 RPIC12D_RS09195 95449fa38839e41deb4018c5868253bf 136 Gene3D G3DSA:1.20.1300.10 3 133 1.4E-35 T 22-04-2016 RPIC12D_RS09195 95449fa38839e41deb4018c5868253bf 136 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 128 6.4E-25 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 RPIC12D_RS09195 95449fa38839e41deb4018c5868253bf 136 SUPERFAMILY SSF81343 1 132 1.24E-28 T 22-04-2016 RPIC12D_RS05490 d8777f5746b6c66eece3728b20c34a80 234 PANTHER PTHR11922:SF11 48 188 5.2E-41 T 22-04-2016 RPIC12D_RS05490 d8777f5746b6c66eece3728b20c34a80 234 PANTHER PTHR11922 48 188 5.2E-41 T 22-04-2016 RPIC12D_RS05490 d8777f5746b6c66eece3728b20c34a80 234 SUPERFAMILY SSF52317 23 231 2.72E-44 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS05490 d8777f5746b6c66eece3728b20c34a80 234 Pfam PF00117 Glutamine amidotransferase class-I 43 184 4.4E-15 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RPIC12D_RS05490 d8777f5746b6c66eece3728b20c34a80 234 Gene3D G3DSA:3.40.50.880 2 229 6.2E-51 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS08425 14a54f6b1faf9a0fdaec58244e1353b8 1268 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 72 1265 4.6E-301 T 22-04-2016 IPR017731 Type VI secretion system, IcmF RPIC12D_RS08425 14a54f6b1faf9a0fdaec58244e1353b8 1268 PANTHER PTHR36153 47 1268 0.0 T 22-04-2016 RPIC12D_RS08425 14a54f6b1faf9a0fdaec58244e1353b8 1268 PANTHER PTHR36153:SF3 47 1268 0.0 T 22-04-2016 RPIC12D_RS08425 14a54f6b1faf9a0fdaec58244e1353b8 1268 Pfam PF06761 Intracellular multiplication and human macrophage-killing 593 891 3.9E-74 T 22-04-2016 IPR009612 ImcF-related RPIC12D_RS08425 14a54f6b1faf9a0fdaec58244e1353b8 1268 Pfam PF14331 ImcF-related N-terminal domain 259 525 2.8E-77 T 22-04-2016 IPR025743 ImcF-related, N-terminal domain RPIC12D_RS08425 14a54f6b1faf9a0fdaec58244e1353b8 1268 Pfam PF06744 Type VI secretion protein IcmF C-terminal 1014 1215 1.3E-50 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal RPIC12D_RS12525 45b8aa7094ffb607c5a07bff33508fa2 131 Gene3D G3DSA:3.10.180.10 5 121 1.0E-29 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS12525 45b8aa7094ffb607c5a07bff33508fa2 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 115 1.6E-6 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC12D_RS12525 45b8aa7094ffb607c5a07bff33508fa2 131 PANTHER PTHR33993:SF4 1 121 2.7E-36 T 22-04-2016 RPIC12D_RS12525 45b8aa7094ffb607c5a07bff33508fa2 131 SUPERFAMILY SSF54593 3 121 1.22E-20 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS12525 45b8aa7094ffb607c5a07bff33508fa2 131 PANTHER PTHR33993 1 121 2.7E-36 T 22-04-2016 RPIC12D_RS03955 e24557c2436d8c5087246d53a5ca2ded 138 Pfam PF01814 Hemerythrin HHE cation binding domain 18 120 1.2E-10 T 22-04-2016 IPR012312 Haemerythrin-like RPIC12D_RS03955 e24557c2436d8c5087246d53a5ca2ded 138 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 124 7.3E-20 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 RPIC12D_RS03955 e24557c2436d8c5087246d53a5ca2ded 138 SUPERFAMILY SSF47188 1 124 9.29E-26 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 RPIC12D_RS03955 e24557c2436d8c5087246d53a5ca2ded 138 ProSitePatterns PS00550 Hemerythrin family signature. 53 76 - T 22-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 RPIC12D_RS03955 e24557c2436d8c5087246d53a5ca2ded 138 Gene3D G3DSA:1.20.120.50 1 124 3.5E-23 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 RPIC12D_RS03955 e24557c2436d8c5087246d53a5ca2ded 138 PANTHER PTHR37164 3 138 5.5E-16 T 22-04-2016 RPIC12D_RS07300 9879399731dde679c33f99d17e5e59c3 282 Gene3D G3DSA:3.60.21.10 2 249 1.2E-34 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS07300 9879399731dde679c33f99d17e5e59c3 282 SUPERFAMILY SSF56300 1 254 3.94E-50 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS07300 9879399731dde679c33f99d17e5e59c3 282 PANTHER PTHR12905 37 214 2.4E-17 T 22-04-2016 RPIC12D_RS07300 9879399731dde679c33f99d17e5e59c3 282 PANTHER PTHR12905 4 15 2.4E-17 T 22-04-2016 RPIC12D_RS07300 9879399731dde679c33f99d17e5e59c3 282 Pfam PF00149 Calcineurin-like phosphoesterase 1 206 1.1E-20 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RPIC12D_RS07300 9879399731dde679c33f99d17e5e59c3 282 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 264 37.199 T 22-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 RPIC12D_RS07300 9879399731dde679c33f99d17e5e59c3 282 PANTHER PTHR12905:SF7 37 214 2.4E-17 T 22-04-2016 RPIC12D_RS07300 9879399731dde679c33f99d17e5e59c3 282 PANTHER PTHR12905:SF7 4 15 2.4E-17 T 22-04-2016 RPIC12D_RS15380 354e3fb73f36e3d2b2d0289d31acfacd 194 PANTHER PTHR26402 9 192 1.3E-41 T 22-04-2016 RPIC12D_RS15380 354e3fb73f36e3d2b2d0289d31acfacd 194 PANTHER PTHR26402:SF151 9 192 1.3E-41 T 22-04-2016 RPIC12D_RS15380 354e3fb73f36e3d2b2d0289d31acfacd 194 SUPERFAMILY SSF52172 10 131 8.11E-26 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS15380 354e3fb73f36e3d2b2d0289d31acfacd 194 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS15380 354e3fb73f36e3d2b2d0289d31acfacd 194 Pfam PF00072 Response regulator receiver domain 11 122 3.0E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS15380 354e3fb73f36e3d2b2d0289d31acfacd 194 SUPERFAMILY SSF46894 142 192 2.18E-15 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS15380 354e3fb73f36e3d2b2d0289d31acfacd 194 Gene3D G3DSA:1.10.10.10 150 192 1.7E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS15380 354e3fb73f36e3d2b2d0289d31acfacd 194 SMART SM00448 9 122 7.8E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS15380 354e3fb73f36e3d2b2d0289d31acfacd 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 2.8E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS15380 354e3fb73f36e3d2b2d0289d31acfacd 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 2.8E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS15380 354e3fb73f36e3d2b2d0289d31acfacd 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 2.8E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS15380 354e3fb73f36e3d2b2d0289d31acfacd 194 Gene3D G3DSA:3.40.50.2300 10 149 1.3E-27 T 22-04-2016 RPIC12D_RS15380 354e3fb73f36e3d2b2d0289d31acfacd 194 SMART SM00421 145 194 3.4E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS15380 354e3fb73f36e3d2b2d0289d31acfacd 194 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 191 2.3E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS15685 f54e5050894974f65a370d4b6823e917 115 Gene3D G3DSA:1.10.760.10 34 109 5.2E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS15685 f54e5050894974f65a370d4b6823e917 115 Pfam PF00034 Cytochrome c 35 108 1.7E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS15685 f54e5050894974f65a370d4b6823e917 115 SUPERFAMILY SSF46626 35 109 3.01E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS15685 f54e5050894974f65a370d4b6823e917 115 PRINTS PR00606 Class ID cytochrome C signature 73 86 1.94935E-20 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC12D_RS15685 f54e5050894974f65a370d4b6823e917 115 PRINTS PR00606 Class ID cytochrome C signature 50 63 1.94935E-20 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC12D_RS15685 f54e5050894974f65a370d4b6823e917 115 PRINTS PR00606 Class ID cytochrome C signature 100 110 1.94935E-20 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC12D_RS15685 f54e5050894974f65a370d4b6823e917 115 PRINTS PR00606 Class ID cytochrome C signature 88 98 1.94935E-20 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC12D_RS15685 f54e5050894974f65a370d4b6823e917 115 PRINTS PR00606 Class ID cytochrome C signature 35 48 1.94935E-20 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC12D_RS14650 85f7f2aefbf41293b9049134283d0868 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.009 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14650 85f7f2aefbf41293b9049134283d0868 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 1.7E-20 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14650 85f7f2aefbf41293b9049134283d0868 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14650 85f7f2aefbf41293b9049134283d0868 38 PANTHER PTHR18804 1 38 4.5E-19 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14650 85f7f2aefbf41293b9049134283d0868 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 7.0E-10 T 22-04-2016 RPIC12D_RS14650 85f7f2aefbf41293b9049134283d0868 38 Pfam PF00444 Ribosomal protein L36 1 38 2.4E-19 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14650 85f7f2aefbf41293b9049134283d0868 38 SUPERFAMILY SSF57840 1 38 7.98E-17 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS05090 d8c05310737319295b7975d41bd18548 311 PANTHER PTHR10091 14 310 2.5E-34 T 22-04-2016 RPIC12D_RS05090 d8c05310737319295b7975d41bd18548 311 SUPERFAMILY SSF74650 12 308 5.78E-48 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RPIC12D_RS05090 d8c05310737319295b7975d41bd18548 311 Gene3D G3DSA:2.70.98.10 12 306 3.8E-20 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 RPIC12D_RS05090 d8c05310737319295b7975d41bd18548 311 Pfam PF01263 Aldose 1-epimerase 14 305 1.3E-29 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RPIC12D_RS05090 d8c05310737319295b7975d41bd18548 311 PANTHER PTHR10091:SF5 14 310 2.5E-34 T 22-04-2016 RPIC12D_RS15060 fd255ff657159098c252bf05616ad7f1 755 PANTHER PTHR30460:SF0 289 746 6.4E-87 T 22-04-2016 RPIC12D_RS15060 fd255ff657159098c252bf05616ad7f1 755 Pfam PF00924 Mechanosensitive ion channel 517 714 2.2E-34 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RPIC12D_RS15060 fd255ff657159098c252bf05616ad7f1 755 SUPERFAMILY SSF82861 474 557 2.22E-12 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RPIC12D_RS15060 fd255ff657159098c252bf05616ad7f1 755 PANTHER PTHR30460 289 746 6.4E-87 T 22-04-2016 RPIC12D_RS15060 fd255ff657159098c252bf05616ad7f1 755 SUPERFAMILY SSF50182 559 621 5.23E-10 T 22-04-2016 IPR010920 LSM domain RPIC12D_RS15060 fd255ff657159098c252bf05616ad7f1 755 SUPERFAMILY SSF82689 622 723 1.57E-9 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RPIC12D_RS15060 fd255ff657159098c252bf05616ad7f1 755 Gene3D G3DSA:2.30.30.60 575 620 3.6E-8 T 22-04-2016 RPIC12D_RS09050 cbb6bfaabc1717d7bb8d98f945a3c6b0 137 PANTHER PTHR34309 1 136 5.2E-50 T 22-04-2016 RPIC12D_RS09050 cbb6bfaabc1717d7bb8d98f945a3c6b0 137 SUPERFAMILY SSF143744 2 133 9.29E-36 T 22-04-2016 RPIC12D_RS09050 cbb6bfaabc1717d7bb8d98f945a3c6b0 137 Pfam PF03928 Haem-degrading 9 130 1.9E-28 T 22-04-2016 IPR005624 Haem-degrading RPIC12D_RS09050 cbb6bfaabc1717d7bb8d98f945a3c6b0 137 PANTHER PTHR34309:SF4 1 136 5.2E-50 T 22-04-2016 RPIC12D_RS06315 163773b5dd74957efb6bf73716f2d7c2 331 Pfam PF00535 Glycosyl transferase family 2 7 166 5.0E-28 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RPIC12D_RS06315 163773b5dd74957efb6bf73716f2d7c2 331 Gene3D G3DSA:3.90.550.10 2 144 1.4E-21 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS06315 163773b5dd74957efb6bf73716f2d7c2 331 PANTHER PTHR10859:SF49 4 312 1.1E-114 T 22-04-2016 RPIC12D_RS06315 163773b5dd74957efb6bf73716f2d7c2 331 PANTHER PTHR10859 4 312 1.1E-114 T 22-04-2016 RPIC12D_RS06315 163773b5dd74957efb6bf73716f2d7c2 331 SUPERFAMILY SSF53448 2 255 6.88E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS14795 6a9aea75821e1a12aab0b086f9a60cea 306 Gene3D G3DSA:3.40.190.10 92 178 1.4E-25 T 22-04-2016 RPIC12D_RS14795 6a9aea75821e1a12aab0b086f9a60cea 306 Gene3D G3DSA:3.40.190.10 179 260 2.0E-22 T 22-04-2016 RPIC12D_RS14795 6a9aea75821e1a12aab0b086f9a60cea 306 SUPERFAMILY SSF46785 4 111 6.77E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS14795 6a9aea75821e1a12aab0b086f9a60cea 306 PANTHER PTHR30537 1 294 1.8E-113 T 22-04-2016 RPIC12D_RS14795 6a9aea75821e1a12aab0b086f9a60cea 306 PANTHER PTHR30537:SF5 1 294 1.8E-113 T 22-04-2016 RPIC12D_RS14795 6a9aea75821e1a12aab0b086f9a60cea 306 SUPERFAMILY SSF53850 89 296 9.18E-49 T 22-04-2016 RPIC12D_RS14795 6a9aea75821e1a12aab0b086f9a60cea 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.0E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS14795 6a9aea75821e1a12aab0b086f9a60cea 306 Gene3D G3DSA:1.10.10.10 3 88 1.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS14795 6a9aea75821e1a12aab0b086f9a60cea 306 Pfam PF03466 LysR substrate binding domain 88 293 1.1E-46 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS10760 7c167efeebdd4e66cc6ba4b75ed76eb2 276 Pfam PF05707 Zonular occludens toxin (Zot) 3 154 5.2E-26 T 22-04-2016 IPR008900 Zona occludens toxin RPIC12D_RS10760 7c167efeebdd4e66cc6ba4b75ed76eb2 276 Gene3D G3DSA:3.40.50.300 1 206 1.2E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14115 6e22377ea9435e59d5cdab657bc26166 304 Gene3D G3DSA:3.30.420.10 122 283 1.0E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS14115 6e22377ea9435e59d5cdab657bc26166 304 PANTHER PTHR32552 4 292 2.5E-70 T 22-04-2016 RPIC12D_RS14115 6e22377ea9435e59d5cdab657bc26166 304 Pfam PF13276 HTH-like domain 47 103 1.0E-15 T 22-04-2016 IPR025948 HTH-like domain RPIC12D_RS14115 6e22377ea9435e59d5cdab657bc26166 304 SUPERFAMILY SSF53098 122 284 6.22E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS14115 6e22377ea9435e59d5cdab657bc26166 304 Pfam PF00665 Integrase core domain 128 243 1.2E-28 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 Gene3D G3DSA:3.30.230.10 594 774 8.9E-76 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 358 377 3.3E-55 T 22-04-2016 RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 729 747 3.3E-55 T 22-04-2016 RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 725 3.3E-55 T 22-04-2016 RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 598 614 3.3E-55 T 22-04-2016 RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 3.3E-55 T 22-04-2016 RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 354 491 3.2E-17 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 SUPERFAMILY SSF88697 13 204 8.95E-53 T 22-04-2016 IPR015947 PUA-like domain RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 SUPERFAMILY SSF52540 315 590 1.34E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 SMART SM00464 13 205 1.4E-76 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 679 687 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 14 203 5.7E-45 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 PANTHER PTHR10046 11 779 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 PANTHER PTHR10046:SF43 11 779 0.0 T 22-04-2016 RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 SMART SM00382 350 494 4.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 Gene3D G3DSA:1.10.8.60 502 587 2.5E-34 T 22-04-2016 RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 572 775 9.0E-98 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 TIGRFAM TIGR00763 lon: endopeptidase La 15 774 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 Gene3D G3DSA:3.40.50.300 313 501 1.7E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 PIRSF PIRSF001174 4 778 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 Hamap MF_01973 Lon protease [lon]. 14 775 71.835 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 RPIC12D_RS07710 195eb397bc9425461db9ece592c4a2ab 804 SUPERFAMILY SSF54211 598 773 2.35E-59 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS15775 555f79beeb86ee7e666fec11dee8e73c 194 PANTHER PTHR16301:SF0 5 194 3.7E-48 T 22-04-2016 RPIC12D_RS15775 555f79beeb86ee7e666fec11dee8e73c 194 Pfam PF01205 Uncharacterized protein family UPF0029 17 119 5.7E-26 T 22-04-2016 IPR001498 Impact, N-terminal RPIC12D_RS15775 555f79beeb86ee7e666fec11dee8e73c 194 Pfam PF09186 Domain of unknown function (DUF1949) 136 190 7.8E-17 T 22-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal RPIC12D_RS15775 555f79beeb86ee7e666fec11dee8e73c 194 SUPERFAMILY SSF54211 4 127 1.63E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS15775 555f79beeb86ee7e666fec11dee8e73c 194 Gene3D G3DSA:3.30.70.240 131 193 1.7E-12 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RPIC12D_RS15775 555f79beeb86ee7e666fec11dee8e73c 194 SUPERFAMILY SSF54980 131 193 8.63E-14 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RPIC12D_RS15775 555f79beeb86ee7e666fec11dee8e73c 194 Gene3D G3DSA:3.30.230.30 4 127 6.4E-43 T 22-04-2016 IPR001498 Impact, N-terminal RPIC12D_RS15775 555f79beeb86ee7e666fec11dee8e73c 194 PANTHER PTHR16301 5 194 3.7E-48 T 22-04-2016 IPR023582 Impact family RPIC12D_RS03575 08d7519d2ba780a36db56c3c719c5ff0 189 Pfam PF13681 Type IV pilus assembly protein PilX C-term 86 188 3.8E-17 T 22-04-2016 IPR025205 PilX/PilW C-terminal domain RPIC12D_RS03575 08d7519d2ba780a36db56c3c719c5ff0 189 Pfam PF14341 PilX N-terminal 14 64 2.6E-13 T 22-04-2016 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain RPIC12D_RS13890 7deb52f71ae44546c7123881b198951e 125 Gene3D G3DSA:1.20.58.380 21 105 6.4E-33 T 22-04-2016 RPIC12D_RS13890 7deb52f71ae44546c7123881b198951e 125 Pfam PF05400 Flagellar protein FliT 35 119 1.7E-21 T 22-04-2016 IPR008622 Flagellar protein FliT RPIC12D_RS09750 ef2c05eae89035f23e8165b5b6788e65 472 Pfam PF01979 Amidohydrolase family 73 438 2.6E-63 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RPIC12D_RS09750 ef2c05eae89035f23e8165b5b6788e65 472 SUPERFAMILY SSF51338 389 460 1.83E-17 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS09750 ef2c05eae89035f23e8165b5b6788e65 472 SUPERFAMILY SSF51338 19 76 1.83E-17 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS09750 ef2c05eae89035f23e8165b5b6788e65 472 PANTHER PTHR11271 20 465 6.3E-183 T 22-04-2016 RPIC12D_RS09750 ef2c05eae89035f23e8165b5b6788e65 472 SUPERFAMILY SSF51556 76 389 1.09E-99 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC12D_RS09750 ef2c05eae89035f23e8165b5b6788e65 472 Gene3D G3DSA:2.30.40.10 398 441 3.1E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS09750 ef2c05eae89035f23e8165b5b6788e65 472 Gene3D G3DSA:2.30.40.10 21 78 3.1E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC12D_RS09750 ef2c05eae89035f23e8165b5b6788e65 472 PANTHER PTHR11271:SF37 20 465 6.3E-183 T 22-04-2016 RPIC12D_RS09750 ef2c05eae89035f23e8165b5b6788e65 472 Gene3D G3DSA:3.20.20.140 79 397 2.3E-111 T 22-04-2016 RPIC12D_RS13130 1ca60fcf2ad9d3f5827a90728b72bdf5 298 SUPERFAMILY SSF53335 72 291 3.92E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS13130 1ca60fcf2ad9d3f5827a90728b72bdf5 298 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 296 2.4E-94 T 22-04-2016 RPIC12D_RS13130 1ca60fcf2ad9d3f5827a90728b72bdf5 298 PIRSF PIRSF000401 1 298 2.8E-102 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RPIC12D_RS13130 1ca60fcf2ad9d3f5827a90728b72bdf5 298 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 296 32.983 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RPIC12D_RS13130 1ca60fcf2ad9d3f5827a90728b72bdf5 298 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 4 290 6.7E-71 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RPIC12D_RS13130 1ca60fcf2ad9d3f5827a90728b72bdf5 298 PANTHER PTHR18895 16 274 3.6E-86 T 22-04-2016 RPIC12D_RS13130 1ca60fcf2ad9d3f5827a90728b72bdf5 298 PANTHER PTHR18895:SF69 16 274 3.6E-86 T 22-04-2016 RPIC12D_RS13130 1ca60fcf2ad9d3f5827a90728b72bdf5 298 Gene3D G3DSA:3.40.50.150 108 291 1.0E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS05885 7fc9caef456e812ce40c385aaa750689 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 3.8E-43 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RPIC12D_RS05885 7fc9caef456e812ce40c385aaa750689 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 6.0E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RPIC12D_RS05885 7fc9caef456e812ce40c385aaa750689 91 Gene3D G3DSA:1.10.3880.10 1 89 4.1E-41 T 22-04-2016 RPIC12D_RS05885 7fc9caef456e812ce40c385aaa750689 91 PANTHER PTHR36965 2 91 1.8E-40 T 22-04-2016 RPIC12D_RS05885 7fc9caef456e812ce40c385aaa750689 91 PANTHER PTHR36965:SF1 2 91 1.8E-40 T 22-04-2016 RPIC12D_RS05885 7fc9caef456e812ce40c385aaa750689 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.638 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RPIC12D_RS05885 7fc9caef456e812ce40c385aaa750689 91 PIRSF PIRSF029827 1 90 2.3E-40 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RPIC12D_RS05885 7fc9caef456e812ce40c385aaa750689 91 SUPERFAMILY SSF111148 1 89 1.83E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RPIC12D_RS08770 209457f7b0800c88d3309915e54706cb 420 SUPERFAMILY SSF53300 249 388 3.34E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A RPIC12D_RS08770 209457f7b0800c88d3309915e54706cb 420 Pfam PF04285 Protein of unknown function (DUF444) 4 417 6.0E-175 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 RPIC12D_RS08770 209457f7b0800c88d3309915e54706cb 420 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 420 36.708 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 RPIC12D_RS08770 209457f7b0800c88d3309915e54706cb 420 PANTHER PTHR30510 1 418 3.3E-149 T 22-04-2016 RPIC12D_RS02480 f981e4faf57b4dc9882402e54e8a6d49 440 Gene3D G3DSA:1.20.1250.20 254 438 9.1E-20 T 22-04-2016 RPIC12D_RS02480 f981e4faf57b4dc9882402e54e8a6d49 440 Pfam PF07690 Major Facilitator Superfamily 40 402 2.7E-45 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS02480 f981e4faf57b4dc9882402e54e8a6d49 440 PANTHER PTHR11662:SF3 10 440 3.0E-142 T 22-04-2016 RPIC12D_RS02480 f981e4faf57b4dc9882402e54e8a6d49 440 SUPERFAMILY SSF103473 13 438 5.23E-81 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS02480 f981e4faf57b4dc9882402e54e8a6d49 440 Gene3D G3DSA:1.20.1250.20 28 231 1.5E-45 T 22-04-2016 RPIC12D_RS02480 f981e4faf57b4dc9882402e54e8a6d49 440 PANTHER PTHR11662 10 440 3.0E-142 T 22-04-2016 RPIC12D_RS00880 4673e40a3c8db5206733dbded0557733 221 SUPERFAMILY SSF159594 36 200 1.7E-30 T 22-04-2016 RPIC12D_RS00880 4673e40a3c8db5206733dbded0557733 221 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 42 189 7.7E-11 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RPIC12D_RS00880 4673e40a3c8db5206733dbded0557733 221 Gene3D G3DSA:3.40.50.10610 25 198 1.9E-36 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RPIC12D_RS08970 231fc751fca6d5e854b4d3734cfdc3d3 422 PANTHER PTHR11958 5 405 4.8E-151 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS08970 231fc751fca6d5e854b4d3734cfdc3d3 422 Pfam PF00375 Sodium:dicarboxylate symporter family 7 403 1.3E-109 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS08970 231fc751fca6d5e854b4d3734cfdc3d3 422 Gene3D G3DSA:1.10.3860.10 3 409 4.8E-115 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS08970 231fc751fca6d5e854b4d3734cfdc3d3 422 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 8.9E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS08970 231fc751fca6d5e854b4d3734cfdc3d3 422 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 8.9E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS08970 231fc751fca6d5e854b4d3734cfdc3d3 422 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 8.9E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS08970 231fc751fca6d5e854b4d3734cfdc3d3 422 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 8.9E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS08970 231fc751fca6d5e854b4d3734cfdc3d3 422 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 8.9E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS08970 231fc751fca6d5e854b4d3734cfdc3d3 422 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 8.9E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS08970 231fc751fca6d5e854b4d3734cfdc3d3 422 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 8.9E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS08970 231fc751fca6d5e854b4d3734cfdc3d3 422 SUPERFAMILY SSF118215 6 405 5.75E-112 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS08970 231fc751fca6d5e854b4d3734cfdc3d3 422 PANTHER PTHR11958:SF26 5 405 4.8E-151 T 22-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 RPIC12D_RS11990 4778c7c1fe9cd8cb584b28119d82e137 180 Pfam PF07366 SnoaL-like polyketide cyclase 53 176 3.7E-36 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RPIC12D_RS11990 4778c7c1fe9cd8cb584b28119d82e137 180 SUPERFAMILY SSF54427 54 180 2.76E-31 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS11990 4778c7c1fe9cd8cb584b28119d82e137 180 PANTHER PTHR38436 45 180 1.4E-31 T 22-04-2016 RPIC12D_RS11990 4778c7c1fe9cd8cb584b28119d82e137 180 Gene3D G3DSA:3.10.450.50 54 180 3.1E-31 T 22-04-2016 IPR032710 NTF2-like domain RPIC12D_RS03775 9d7c0bb6acd1f2150ce556b48c42466a 426 Gene3D G3DSA:1.20.1250.20 10 204 2.5E-44 T 22-04-2016 RPIC12D_RS03775 9d7c0bb6acd1f2150ce556b48c42466a 426 PANTHER PTHR11662 3 416 2.5E-121 T 22-04-2016 RPIC12D_RS03775 9d7c0bb6acd1f2150ce556b48c42466a 426 PANTHER PTHR11662:SF3 3 416 2.5E-121 T 22-04-2016 RPIC12D_RS03775 9d7c0bb6acd1f2150ce556b48c42466a 426 Pfam PF07690 Major Facilitator Superfamily 267 413 3.0E-14 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS03775 9d7c0bb6acd1f2150ce556b48c42466a 426 Pfam PF07690 Major Facilitator Superfamily 17 257 4.0E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS03775 9d7c0bb6acd1f2150ce556b48c42466a 426 Gene3D G3DSA:1.20.1250.20 224 415 3.3E-33 T 22-04-2016 RPIC12D_RS03775 9d7c0bb6acd1f2150ce556b48c42466a 426 SUPERFAMILY SSF103473 6 415 1.83E-86 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS05730 32555977727aa8cd333396a03c93fd74 324 Gene3D G3DSA:3.90.180.10 1 144 1.2E-45 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS05730 32555977727aa8cd333396a03c93fd74 324 SUPERFAMILY SSF50129 1 140 2.59E-39 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS05730 32555977727aa8cd333396a03c93fd74 324 SUPERFAMILY SSF51735 111 280 1.87E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS05730 32555977727aa8cd333396a03c93fd74 324 PANTHER PTHR11695 15 324 3.2E-130 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RPIC12D_RS05730 32555977727aa8cd333396a03c93fd74 324 Pfam PF00107 Zinc-binding dehydrogenase 151 279 9.7E-30 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIC12D_RS05730 32555977727aa8cd333396a03c93fd74 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 2.9E-13 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIC12D_RS05730 32555977727aa8cd333396a03c93fd74 324 PANTHER PTHR11695:SF31 15 324 3.2E-130 T 22-04-2016 RPIC12D_RS05730 32555977727aa8cd333396a03c93fd74 324 Gene3D G3DSA:3.40.50.720 145 262 9.0E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS05730 32555977727aa8cd333396a03c93fd74 324 SMART SM00829 10 322 1.4E-46 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIC12D_RS03930 ffc70b88dc9dd719f5b9a0c52edafbca 540 Pfam PF05199 GMC oxidoreductase 425 532 1.1E-19 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 RPIC12D_RS03930 ffc70b88dc9dd719f5b9a0c52edafbca 540 PANTHER PTHR11552:SF139 5 539 1.0E-72 T 22-04-2016 RPIC12D_RS03930 ffc70b88dc9dd719f5b9a0c52edafbca 540 Pfam PF00732 GMC oxidoreductase 237 322 3.5E-5 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS03930 ffc70b88dc9dd719f5b9a0c52edafbca 540 SUPERFAMILY SSF51905 211 327 2.44E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS03930 ffc70b88dc9dd719f5b9a0c52edafbca 540 SUPERFAMILY SSF51905 8 178 2.44E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS03930 ffc70b88dc9dd719f5b9a0c52edafbca 540 SUPERFAMILY SSF51905 480 538 2.44E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS03930 ffc70b88dc9dd719f5b9a0c52edafbca 540 Pfam PF01266 FAD dependent oxidoreductase 12 44 6.5E-7 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIC12D_RS03930 ffc70b88dc9dd719f5b9a0c52edafbca 540 Gene3D G3DSA:3.50.50.60 387 400 1.2E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS03930 ffc70b88dc9dd719f5b9a0c52edafbca 540 Gene3D G3DSA:3.50.50.60 8 148 1.2E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS03930 ffc70b88dc9dd719f5b9a0c52edafbca 540 Gene3D G3DSA:3.50.50.60 219 323 1.2E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS03930 ffc70b88dc9dd719f5b9a0c52edafbca 540 Gene3D G3DSA:3.50.50.60 471 539 1.2E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS03930 ffc70b88dc9dd719f5b9a0c52edafbca 540 PANTHER PTHR11552 5 539 1.0E-72 T 22-04-2016 RPIC12D_RS01160 32035227837cfd073366c2f0e45fb853 240 PANTHER PTHR11907 1 240 7.0E-42 T 22-04-2016 RPIC12D_RS01160 32035227837cfd073366c2f0e45fb853 240 Pfam PF00156 Phosphoribosyl transferase domain 145 235 2.4E-7 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIC12D_RS01160 32035227837cfd073366c2f0e45fb853 240 Gene3D G3DSA:3.40.50.2020 65 239 3.0E-26 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS01160 32035227837cfd073366c2f0e45fb853 240 PANTHER PTHR11907:SF9 1 240 7.0E-42 T 22-04-2016 RPIC12D_RS01160 32035227837cfd073366c2f0e45fb853 240 SUPERFAMILY SSF53271 64 238 4.2E-37 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS00135 ed87e9b19fabc84e406979e4a0cea680 661 Gene3D G3DSA:1.20.144.10 138 194 1.2E-49 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC12D_RS00135 ed87e9b19fabc84e406979e4a0cea680 661 Gene3D G3DSA:1.20.144.10 227 371 1.2E-49 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC12D_RS00135 ed87e9b19fabc84e406979e4a0cea680 661 Pfam PF12951 Passenger-associated-transport-repeat 514 542 1.3E-6 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RPIC12D_RS00135 ed87e9b19fabc84e406979e4a0cea680 661 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 514 543 1.3E-9 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RPIC12D_RS00135 ed87e9b19fabc84e406979e4a0cea680 661 Pfam PF01569 PAP2 superfamily 246 349 3.4E-12 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC12D_RS00135 ed87e9b19fabc84e406979e4a0cea680 661 Gene3D G3DSA:2.160.20.20 478 659 1.3E-6 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like RPIC12D_RS00135 ed87e9b19fabc84e406979e4a0cea680 661 SUPERFAMILY SSF51126 386 632 1.88E-6 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor RPIC12D_RS00135 ed87e9b19fabc84e406979e4a0cea680 661 SMART SM00014 228 351 5.0E-4 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC12D_RS00135 ed87e9b19fabc84e406979e4a0cea680 661 SUPERFAMILY SSF48317 233 367 3.66E-23 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC12D_RS08920 a5be12f29227d80d96bd70d7b6d1f4f1 668 SMART SM00939 399 659 3.3E-32 T 22-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 RPIC12D_RS08920 a5be12f29227d80d96bd70d7b6d1f4f1 668 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 109 379 6.6E-55 T 22-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 RPIC12D_RS08920 a5be12f29227d80d96bd70d7b6d1f4f1 668 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 106 664 2.9E-79 T 22-04-2016 IPR005674 CocE/Serine esterase GO:0016787 RPIC12D_RS08920 a5be12f29227d80d96bd70d7b6d1f4f1 668 SUPERFAMILY SSF49785 428 664 8.29E-32 T 22-04-2016 IPR008979 Galactose-binding domain-like RPIC12D_RS08920 a5be12f29227d80d96bd70d7b6d1f4f1 668 PANTHER PTHR11731:SF151 105 270 2.7E-28 T 22-04-2016 RPIC12D_RS08920 a5be12f29227d80d96bd70d7b6d1f4f1 668 PANTHER PTHR11731:SF151 311 418 2.7E-28 T 22-04-2016 RPIC12D_RS08920 a5be12f29227d80d96bd70d7b6d1f4f1 668 PANTHER PTHR11731 105 270 2.7E-28 T 22-04-2016 RPIC12D_RS08920 a5be12f29227d80d96bd70d7b6d1f4f1 668 PANTHER PTHR11731 311 418 2.7E-28 T 22-04-2016 RPIC12D_RS08920 a5be12f29227d80d96bd70d7b6d1f4f1 668 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 412 658 4.2E-33 T 22-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 RPIC12D_RS08920 a5be12f29227d80d96bd70d7b6d1f4f1 668 Gene3D G3DSA:3.40.50.1820 84 253 3.8E-73 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS08920 a5be12f29227d80d96bd70d7b6d1f4f1 668 Gene3D G3DSA:3.40.50.1820 328 431 3.8E-73 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS08920 a5be12f29227d80d96bd70d7b6d1f4f1 668 Gene3D G3DSA:2.60.120.260 432 666 1.9E-43 T 22-04-2016 IPR008979 Galactose-binding domain-like RPIC12D_RS08920 a5be12f29227d80d96bd70d7b6d1f4f1 668 SUPERFAMILY SSF53474 84 435 3.18E-57 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS04260 e4a0c55912f206a68d1e4141144677c8 454 Gene3D G3DSA:3.40.50.720 1 211 4.7E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS04260 e4a0c55912f206a68d1e4141144677c8 454 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 209 301 9.6E-37 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 RPIC12D_RS04260 e4a0c55912f206a68d1e4141144677c8 454 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 434 1.8E-32 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RPIC12D_RS04260 e4a0c55912f206a68d1e4141144677c8 454 PANTHER PTHR11374 1 454 2.3E-241 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RPIC12D_RS04260 e4a0c55912f206a68d1e4141144677c8 454 PIRSF PIRSF000124 1 450 1.1E-145 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RPIC12D_RS04260 e4a0c55912f206a68d1e4141144677c8 454 SMART SM00984 325 435 2.1E-49 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RPIC12D_RS04260 e4a0c55912f206a68d1e4141144677c8 454 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 180 1.1E-63 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 RPIC12D_RS04260 e4a0c55912f206a68d1e4141144677c8 454 SUPERFAMILY SSF52413 314 445 4.45E-39 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RPIC12D_RS04260 e4a0c55912f206a68d1e4141144677c8 454 PANTHER PTHR11374:SF18 1 454 2.3E-241 T 22-04-2016 RPIC12D_RS04260 e4a0c55912f206a68d1e4141144677c8 454 SUPERFAMILY SSF51735 1 200 8.78E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS04260 e4a0c55912f206a68d1e4141144677c8 454 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 431 5.7E-132 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RPIC12D_RS04260 e4a0c55912f206a68d1e4141144677c8 454 SUPERFAMILY SSF48179 209 306 1.0E-31 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS04260 e4a0c55912f206a68d1e4141144677c8 454 PIRSF PIRSF500134 1 453 1.8E-187 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 RPIC12D_RS04260 e4a0c55912f206a68d1e4141144677c8 454 Gene3D G3DSA:1.20.5.100 212 239 7.7E-18 T 22-04-2016 RPIC12D_RS04260 e4a0c55912f206a68d1e4141144677c8 454 Gene3D G3DSA:3.40.50.720 240 452 9.0E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS10235 9283a6bcde69996d5b4a5ae04a01e809 268 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 10 263 37.198 T 22-04-2016 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RPIC12D_RS10235 9283a6bcde69996d5b4a5ae04a01e809 268 Pfam PF02649 Type I GTP cyclohydrolase folE2 10 258 2.1E-91 T 22-04-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RPIC12D_RS10235 9283a6bcde69996d5b4a5ae04a01e809 268 PANTHER PTHR36445 5 264 1.9E-71 T 22-04-2016 RPIC12D_RS10235 9283a6bcde69996d5b4a5ae04a01e809 268 PANTHER PTHR36445:SF1 5 264 1.9E-71 T 22-04-2016 RPIC12D_RS10235 9283a6bcde69996d5b4a5ae04a01e809 268 Gene3D G3DSA:3.10.270.10 9 262 2.5E-106 T 22-04-2016 RPIC12D_RS09190 f677a8623009f98be8dded4f0a308b8b 121 PIRSF PIRSF000169 7 121 2.0E-41 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 RPIC12D_RS09190 f677a8623009f98be8dded4f0a308b8b 121 PANTHER PTHR38689:SF1 18 121 5.0E-28 T 22-04-2016 RPIC12D_RS09190 f677a8623009f98be8dded4f0a308b8b 121 Gene3D G3DSA:1.20.1300.10 10 121 2.1E-37 T 22-04-2016 RPIC12D_RS09190 f677a8623009f98be8dded4f0a308b8b 121 PANTHER PTHR38689 18 121 5.0E-28 T 22-04-2016 RPIC12D_RS09190 f677a8623009f98be8dded4f0a308b8b 121 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 107 1.1E-15 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 RPIC12D_RS09190 f677a8623009f98be8dded4f0a308b8b 121 SUPERFAMILY SSF81343 10 121 4.91E-31 T 22-04-2016 RPIC12D_RS09190 f677a8623009f98be8dded4f0a308b8b 121 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 15 119 2.7E-39 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 RPIC12D_RS08515 5adb765778b1b6e53359d9d6017da775 346 PANTHER PTHR35564:SF1 22 342 1.3E-142 T 22-04-2016 RPIC12D_RS08515 5adb765778b1b6e53359d9d6017da775 346 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 26 325 5.3E-97 T 22-04-2016 IPR010732 Type VI secretion, TssG-like RPIC12D_RS08515 5adb765778b1b6e53359d9d6017da775 346 PANTHER PTHR35564 22 342 1.3E-142 T 22-04-2016 RPIC12D_RS08515 5adb765778b1b6e53359d9d6017da775 346 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 26 325 1.2E-92 T 22-04-2016 IPR010732 Type VI secretion, TssG-like RPIC12D_RS03180 aaf057a251fc55ab9b9c979043360210 186 Pfam PF11198 Protein of unknown function (DUF2857) 8 182 1.5E-62 T 22-04-2016 IPR021364 Protein of unknown function DUF2857 RPIC12D_RS00450 13638dba36ee79f40e9b32764601806f 240 Pfam PF12833 Helix-turn-helix domain 162 240 1.3E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS00450 13638dba36ee79f40e9b32764601806f 240 Gene3D G3DSA:2.60.120.10 10 69 4.0E-8 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS00450 13638dba36ee79f40e9b32764601806f 240 Gene3D G3DSA:1.10.10.60 194 240 5.3E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS00450 13638dba36ee79f40e9b32764601806f 240 PANTHER PTHR11019:SF39 1 240 9.7E-36 T 22-04-2016 RPIC12D_RS00450 13638dba36ee79f40e9b32764601806f 240 SUPERFAMILY SSF51182 11 103 5.15E-9 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS00450 13638dba36ee79f40e9b32764601806f 240 SUPERFAMILY SSF46689 139 189 1.25E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS00450 13638dba36ee79f40e9b32764601806f 240 PANTHER PTHR11019 1 240 9.7E-36 T 22-04-2016 RPIC12D_RS00450 13638dba36ee79f40e9b32764601806f 240 SMART SM00342 156 239 2.1E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC12D_RS00450 13638dba36ee79f40e9b32764601806f 240 SUPERFAMILY SSF46689 192 240 3.09E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS00450 13638dba36ee79f40e9b32764601806f 240 Gene3D G3DSA:1.10.10.60 138 193 3.5E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS05515 f3d01c2ef9d333b3981ba04d4ec73e13 168 PANTHER PTHR11071:SF192 5 168 1.3E-74 T 22-04-2016 RPIC12D_RS05515 f3d01c2ef9d333b3981ba04d4ec73e13 168 PIRSF PIRSF001467 1 168 2.1E-28 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RPIC12D_RS05515 f3d01c2ef9d333b3981ba04d4ec73e13 168 SUPERFAMILY SSF50891 4 167 5.11E-60 T 22-04-2016 IPR029000 Cyclophilin-like domain RPIC12D_RS05515 f3d01c2ef9d333b3981ba04d4ec73e13 168 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 55 9.5E-13 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RPIC12D_RS05515 f3d01c2ef9d333b3981ba04d4ec73e13 168 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 9.5E-13 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RPIC12D_RS05515 f3d01c2ef9d333b3981ba04d4ec73e13 168 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 9.5E-13 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RPIC12D_RS05515 f3d01c2ef9d333b3981ba04d4ec73e13 168 Gene3D G3DSA:2.40.100.10 2 167 4.4E-56 T 22-04-2016 IPR029000 Cyclophilin-like domain RPIC12D_RS05515 f3d01c2ef9d333b3981ba04d4ec73e13 168 PANTHER PTHR11071 5 168 1.3E-74 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RPIC12D_RS05515 f3d01c2ef9d333b3981ba04d4ec73e13 168 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 166 6.8E-50 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RPIC12D_RS05515 f3d01c2ef9d333b3981ba04d4ec73e13 168 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 38 55 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 RPIC12D_RS01980 dc758ca03fcd87876d7b25d1dcf826e0 427 Pfam PF01266 FAD dependent oxidoreductase 15 408 4.0E-56 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIC12D_RS01980 dc758ca03fcd87876d7b25d1dcf826e0 427 Gene3D G3DSA:3.30.9.10 145 199 2.5E-4 T 22-04-2016 RPIC12D_RS01980 dc758ca03fcd87876d7b25d1dcf826e0 427 Gene3D G3DSA:3.30.9.10 302 321 2.5E-4 T 22-04-2016 RPIC12D_RS01980 dc758ca03fcd87876d7b25d1dcf826e0 427 SUPERFAMILY SSF51905 369 426 6.21E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS01980 dc758ca03fcd87876d7b25d1dcf826e0 427 SUPERFAMILY SSF51905 14 65 6.21E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS01980 dc758ca03fcd87876d7b25d1dcf826e0 427 SUPERFAMILY SSF51905 118 282 6.21E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS01980 dc758ca03fcd87876d7b25d1dcf826e0 427 SUPERFAMILY SSF54373 284 369 1.31E-14 T 22-04-2016 RPIC12D_RS01980 dc758ca03fcd87876d7b25d1dcf826e0 427 Gene3D G3DSA:3.50.50.60 369 426 9.4E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS01980 dc758ca03fcd87876d7b25d1dcf826e0 427 Gene3D G3DSA:3.50.50.60 119 141 9.4E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS01980 dc758ca03fcd87876d7b25d1dcf826e0 427 Gene3D G3DSA:3.50.50.60 200 281 9.4E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS01980 dc758ca03fcd87876d7b25d1dcf826e0 427 Gene3D G3DSA:3.50.50.60 14 69 9.4E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS01980 dc758ca03fcd87876d7b25d1dcf826e0 427 PANTHER PTHR13847:SF216 15 71 4.0E-55 T 22-04-2016 RPIC12D_RS01980 dc758ca03fcd87876d7b25d1dcf826e0 427 PANTHER PTHR13847:SF216 118 427 4.0E-55 T 22-04-2016 RPIC12D_RS01980 dc758ca03fcd87876d7b25d1dcf826e0 427 PANTHER PTHR13847 15 71 4.0E-55 T 22-04-2016 RPIC12D_RS01980 dc758ca03fcd87876d7b25d1dcf826e0 427 PANTHER PTHR13847 118 427 4.0E-55 T 22-04-2016 RPIC12D_RS09335 20615523b0b23cc1ae90be827e31ea8b 230 Gene3D G3DSA:1.20.1050.10 83 200 2.0E-53 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS09335 20615523b0b23cc1ae90be827e31ea8b 230 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 79 5.9E-13 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC12D_RS09335 20615523b0b23cc1ae90be827e31ea8b 230 SUPERFAMILY SSF47616 85 202 1.36E-38 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS09335 20615523b0b23cc1ae90be827e31ea8b 230 Gene3D G3DSA:3.40.30.10 1 82 1.1E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS09335 20615523b0b23cc1ae90be827e31ea8b 230 SUPERFAMILY SSF52833 2 83 4.49E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS09335 20615523b0b23cc1ae90be827e31ea8b 230 PANTHER PTHR11260:SF178 2 212 6.1E-78 T 22-04-2016 RPIC12D_RS09335 20615523b0b23cc1ae90be827e31ea8b 230 Pfam PF00043 Glutathione S-transferase, C-terminal domain 109 196 2.8E-10 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RPIC12D_RS09335 20615523b0b23cc1ae90be827e31ea8b 230 PANTHER PTHR11260 2 212 6.1E-78 T 22-04-2016 RPIC12D_RS06480 2a45b8936b136b20458600710612048a 277 PANTHER PTHR26402 5 127 7.0E-42 T 22-04-2016 RPIC12D_RS06480 2a45b8936b136b20458600710612048a 277 SMART SM00850 181 277 6.2E-23 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 RPIC12D_RS06480 2a45b8936b136b20458600710612048a 277 Gene3D G3DSA:2.40.50.40 173 241 6.6E-17 T 22-04-2016 RPIC12D_RS06480 2a45b8936b136b20458600710612048a 277 Gene3D G3DSA:3.40.50.2300 3 131 1.0E-27 T 22-04-2016 RPIC12D_RS06480 2a45b8936b136b20458600710612048a 277 Pfam PF04397 LytTr DNA-binding domain 183 277 3.9E-22 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 RPIC12D_RS06480 2a45b8936b136b20458600710612048a 277 PANTHER PTHR26402:SF524 5 127 7.0E-42 T 22-04-2016 RPIC12D_RS06480 2a45b8936b136b20458600710612048a 277 Pfam PF00072 Response regulator receiver domain 7 121 5.3E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS06480 2a45b8936b136b20458600710612048a 277 SMART SM00448 5 121 7.3E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS06480 2a45b8936b136b20458600710612048a 277 SUPERFAMILY SSF52172 4 132 5.69E-28 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS11860 510ab83eea630478e704649a1365909b 248 Gene3D G3DSA:3.40.50.720 3 248 1.2E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS11860 510ab83eea630478e704649a1365909b 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC12D_RS11860 510ab83eea630478e704649a1365909b 248 PANTHER PTHR24322 157 188 2.6E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS11860 510ab83eea630478e704649a1365909b 248 PANTHER PTHR24322 7 140 2.6E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS11860 510ab83eea630478e704649a1365909b 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 247 8.2E-60 T 22-04-2016 RPIC12D_RS11860 510ab83eea630478e704649a1365909b 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS11860 510ab83eea630478e704649a1365909b 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 9.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS11860 510ab83eea630478e704649a1365909b 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 9.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS11860 510ab83eea630478e704649a1365909b 248 SUPERFAMILY SSF51735 3 247 3.5E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS11860 510ab83eea630478e704649a1365909b 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS11860 510ab83eea630478e704649a1365909b 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS11860 510ab83eea630478e704649a1365909b 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 8.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS11860 510ab83eea630478e704649a1365909b 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 8.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS11860 510ab83eea630478e704649a1365909b 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 8.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS11860 510ab83eea630478e704649a1365909b 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 8.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00695 2d56d2b8607e5f1c88a9bcce692054cd 281 Pfam PF01497 Periplasmic binding protein 20 179 1.2E-11 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RPIC12D_RS00695 2d56d2b8607e5f1c88a9bcce692054cd 281 Gene3D G3DSA:3.40.50.1980 150 275 5.9E-10 T 22-04-2016 RPIC12D_RS00695 2d56d2b8607e5f1c88a9bcce692054cd 281 PANTHER PTHR30535 1 179 3.4E-25 T 22-04-2016 RPIC12D_RS00695 2d56d2b8607e5f1c88a9bcce692054cd 281 Gene3D G3DSA:3.40.50.1980 19 136 1.7E-20 T 22-04-2016 RPIC12D_RS00695 2d56d2b8607e5f1c88a9bcce692054cd 281 SUPERFAMILY SSF53807 19 275 4.32E-35 T 22-04-2016 RPIC12D_RS12930 f138b59d026ffad3c67ada1a1a6decfd 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 9.2E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12930 f138b59d026ffad3c67ada1a1a6decfd 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 9.2E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12930 f138b59d026ffad3c67ada1a1a6decfd 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 9.2E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12930 f138b59d026ffad3c67ada1a1a6decfd 269 Gene3D G3DSA:3.40.50.720 11 264 1.1E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS12930 f138b59d026ffad3c67ada1a1a6decfd 269 SUPERFAMILY SSF51735 14 264 2.9E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS12930 f138b59d026ffad3c67ada1a1a6decfd 269 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 262 3.4E-66 T 22-04-2016 RPIC12D_RS12930 f138b59d026ffad3c67ada1a1a6decfd 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC12D_RS12930 f138b59d026ffad3c67ada1a1a6decfd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 3.3E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12930 f138b59d026ffad3c67ada1a1a6decfd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 3.3E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12930 f138b59d026ffad3c67ada1a1a6decfd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 3.3E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12930 f138b59d026ffad3c67ada1a1a6decfd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 247 3.3E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12930 f138b59d026ffad3c67ada1a1a6decfd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 3.3E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12930 f138b59d026ffad3c67ada1a1a6decfd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 3.3E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12930 f138b59d026ffad3c67ada1a1a6decfd 269 PANTHER PTHR24321 11 265 1.1E-55 T 22-04-2016 RPIC12D_RS12930 f138b59d026ffad3c67ada1a1a6decfd 269 PANTHER PTHR24321:SF6 11 265 1.1E-55 T 22-04-2016 RPIC12D_RS12970 7fd011b728ba6b819ba5767e96bf5233 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.3E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12970 7fd011b728ba6b819ba5767e96bf5233 308 PANTHER PTHR30537:SF26 1 308 3.3E-97 T 22-04-2016 RPIC12D_RS12970 7fd011b728ba6b819ba5767e96bf5233 308 Gene3D G3DSA:3.40.190.10 95 173 4.6E-20 T 22-04-2016 RPIC12D_RS12970 7fd011b728ba6b819ba5767e96bf5233 308 PANTHER PTHR30537 1 308 3.3E-97 T 22-04-2016 RPIC12D_RS12970 7fd011b728ba6b819ba5767e96bf5233 308 Gene3D G3DSA:3.40.190.10 174 257 2.5E-20 T 22-04-2016 RPIC12D_RS12970 7fd011b728ba6b819ba5767e96bf5233 308 Pfam PF03466 LysR substrate binding domain 94 291 3.2E-28 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS12970 7fd011b728ba6b819ba5767e96bf5233 308 SUPERFAMILY SSF53850 94 294 2.71E-29 T 22-04-2016 RPIC12D_RS12970 7fd011b728ba6b819ba5767e96bf5233 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12970 7fd011b728ba6b819ba5767e96bf5233 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12970 7fd011b728ba6b819ba5767e96bf5233 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12970 7fd011b728ba6b819ba5767e96bf5233 308 Gene3D G3DSA:1.10.10.10 2 85 1.9E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12970 7fd011b728ba6b819ba5767e96bf5233 308 SUPERFAMILY SSF46785 3 86 3.21E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS02005 988a7b64cb1bfd6083748c211b3ecccd 108 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 103 4.9E-25 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD RPIC12D_RS03445 429e46e1429f592ce2abac7e2a4abc5a 123 Pfam PF12553 Protein of unknown function (DUF3742) 1 120 1.7E-46 T 22-04-2016 IPR022213 Protein of unknown function DUF3742 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 PANTHER PTHR10724:SF6 1 517 4.6E-245 T 22-04-2016 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 SUPERFAMILY SSF50249 258 359 1.57E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 Gene3D G3DSA:2.40.50.140 361 440 4.2E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 SUPERFAMILY SSF50249 7 116 4.55E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 Gene3D G3DSA:2.40.50.140 284 360 1.4E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 Gene3D G3DSA:2.40.50.140 24 104 4.2E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 PANTHER PTHR10724 1 517 4.6E-245 T 22-04-2016 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 PRINTS PR00681 Ribosomal protein S1 signature 42 56 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 PRINTS PR00681 Ribosomal protein S1 signature 158 178 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 PRINTS PR00681 Ribosomal protein S1 signature 111 127 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 PRINTS PR00681 Ribosomal protein S1 signature 129 146 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 PRINTS PR00681 Ribosomal protein S1 signature 87 106 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 PRINTS PR00681 Ribosomal protein S1 signature 333 351 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 PRINTS PR00681 Ribosomal protein S1 signature 24 42 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 PRINTS PR00681 Ribosomal protein S1 signature 293 312 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 PRINTS PR00681 Ribosomal protein S1 signature 215 236 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 6 523 4.6E-206 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 Pfam PF00575 S1 RNA binding domain 364 437 1.7E-19 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 Pfam PF00575 S1 RNA binding domain 279 350 4.3E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 Pfam PF00575 S1 RNA binding domain 192 263 3.2E-22 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 Pfam PF00575 S1 RNA binding domain 453 523 1.7E-12 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 Pfam PF00575 S1 RNA binding domain 106 174 7.6E-13 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 Pfam PF00575 S1 RNA binding domain 22 88 4.0E-7 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 SUPERFAMILY SSF50249 192 280 2.76E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 SMART SM00316 452 523 1.2E-17 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 SMART SM00316 365 437 1.5E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 SMART SM00316 106 174 5.6E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 SMART SM00316 193 263 6.7E-29 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 SMART SM00316 278 350 6.6E-25 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 SMART SM00316 22 90 8.4E-5 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 SUPERFAMILY SSF50249 432 534 5.3E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 PIRSF PIRSF002111 1 537 6.2E-216 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 SUPERFAMILY SSF50249 106 188 7.16E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 Gene3D G3DSA:2.40.50.140 445 524 1.4E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 Gene3D G3DSA:2.40.50.140 186 265 2.6E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 Gene3D G3DSA:2.40.50.140 105 175 8.5E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04240 6320ec6e1240fecad92427ca3aee4609 562 SUPERFAMILY SSF50249 350 440 7.16E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS13860 e96c8a93510a63987a3ec613d15c134f 338 Gene3D G3DSA:3.40.50.720 137 303 6.2E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS13860 e96c8a93510a63987a3ec613d15c134f 338 SUPERFAMILY SSF51735 128 298 3.14E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS13860 e96c8a93510a63987a3ec613d15c134f 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 40 112 3.1E-6 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIC12D_RS13860 e96c8a93510a63987a3ec613d15c134f 338 PANTHER PTHR11695 27 338 7.2E-145 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RPIC12D_RS13860 e96c8a93510a63987a3ec613d15c134f 338 SMART SM00829 20 334 9.2E-6 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIC12D_RS13860 e96c8a93510a63987a3ec613d15c134f 338 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 33 336 1.2E-129 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI RPIC12D_RS13860 e96c8a93510a63987a3ec613d15c134f 338 Pfam PF00107 Zinc-binding dehydrogenase 170 282 1.4E-14 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIC12D_RS13860 e96c8a93510a63987a3ec613d15c134f 338 Gene3D G3DSA:3.90.180.10 34 99 7.4E-7 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS13860 e96c8a93510a63987a3ec613d15c134f 338 PANTHER PTHR11695:SF13 27 338 7.2E-145 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI RPIC12D_RS13860 e96c8a93510a63987a3ec613d15c134f 338 SUPERFAMILY SSF50129 33 156 1.38E-38 T 22-04-2016 IPR011032 GroES-like RPIC12D_RS09390 8033706b95fbe595fd457b0e0b4dd3ee 295 Hamap MF_01384 Urease accessory protein UreD [ureD]. 18 279 28.995 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 RPIC12D_RS09390 8033706b95fbe595fd457b0e0b4dd3ee 295 Pfam PF01774 UreD urease accessory protein 61 268 2.4E-47 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 RPIC12D_RS09390 8033706b95fbe595fd457b0e0b4dd3ee 295 PANTHER PTHR33643 18 292 2.2E-39 T 22-04-2016 RPIC12D_RS09390 8033706b95fbe595fd457b0e0b4dd3ee 295 PANTHER PTHR33643:SF1 18 292 2.2E-39 T 22-04-2016 RPIC12D_RS00900 0aceb9a08ee1f53ca2c6e382028db8ff 700 PANTHER PTHR31956 4 516 3.3E-150 T 22-04-2016 RPIC12D_RS00900 0aceb9a08ee1f53ca2c6e382028db8ff 700 Pfam PF05506 Domain of unknown function (DUF756) 606 685 1.8E-17 T 22-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 RPIC12D_RS00900 0aceb9a08ee1f53ca2c6e382028db8ff 700 Pfam PF05506 Domain of unknown function (DUF756) 506 590 2.4E-21 T 22-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 RPIC12D_RS00900 0aceb9a08ee1f53ca2c6e382028db8ff 700 Pfam PF04185 Phosphoesterase family 48 432 1.2E-111 T 22-04-2016 IPR007312 Phosphoesterase GO:0016788 RPIC12D_RS00900 0aceb9a08ee1f53ca2c6e382028db8ff 700 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 5 698 3.2E-261 T 22-04-2016 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 RPIC12D_RS00900 0aceb9a08ee1f53ca2c6e382028db8ff 700 PANTHER PTHR31956:SF1 4 516 3.3E-150 T 22-04-2016 RPIC12D_RS00220 a483d610edb2ee5984a654f23c5d1909 429 Gene3D G3DSA:1.20.1250.20 11 200 2.1E-14 T 22-04-2016 RPIC12D_RS00220 a483d610edb2ee5984a654f23c5d1909 429 Gene3D G3DSA:1.20.1250.20 220 405 2.4E-17 T 22-04-2016 RPIC12D_RS00220 a483d610edb2ee5984a654f23c5d1909 429 SUPERFAMILY SSF103473 9 409 8.89E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS00220 a483d610edb2ee5984a654f23c5d1909 429 PANTHER PTHR12778 4 404 2.2E-114 T 22-04-2016 RPIC12D_RS00220 a483d610edb2ee5984a654f23c5d1909 429 Pfam PF07690 Major Facilitator Superfamily 19 367 1.2E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS16190 301fb5b5a0b46838cc41b2aa8441f288 557 SUPERFAMILY SSF47384 293 375 9.61E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16190 301fb5b5a0b46838cc41b2aa8441f288 557 Pfam PF08521 Two-component sensor kinase N-terminal 38 157 5.8E-19 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal RPIC12D_RS16190 301fb5b5a0b46838cc41b2aa8441f288 557 SMART SM00388 310 375 8.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16190 301fb5b5a0b46838cc41b2aa8441f288 557 SMART SM00387 432 554 3.5E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16190 301fb5b5a0b46838cc41b2aa8441f288 557 Gene3D G3DSA:1.10.287.130 302 371 6.0E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16190 301fb5b5a0b46838cc41b2aa8441f288 557 PANTHER PTHR24423 196 204 1.1E-55 T 22-04-2016 RPIC12D_RS16190 301fb5b5a0b46838cc41b2aa8441f288 557 PANTHER PTHR24423 245 544 1.1E-55 T 22-04-2016 RPIC12D_RS16190 301fb5b5a0b46838cc41b2aa8441f288 557 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 488 3.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16190 301fb5b5a0b46838cc41b2aa8441f288 557 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 528 3.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16190 301fb5b5a0b46838cc41b2aa8441f288 557 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 502 3.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16190 301fb5b5a0b46838cc41b2aa8441f288 557 Gene3D G3DSA:3.30.565.10 386 554 1.6E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16190 301fb5b5a0b46838cc41b2aa8441f288 557 PANTHER PTHR24423:SF474 196 204 1.1E-55 T 22-04-2016 RPIC12D_RS16190 301fb5b5a0b46838cc41b2aa8441f288 557 PANTHER PTHR24423:SF474 245 544 1.1E-55 T 22-04-2016 RPIC12D_RS16190 301fb5b5a0b46838cc41b2aa8441f288 557 Pfam PF00512 His Kinase A (phospho-acceptor) domain 311 375 3.0E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16190 301fb5b5a0b46838cc41b2aa8441f288 557 SUPERFAMILY SSF55874 364 552 1.11E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16190 301fb5b5a0b46838cc41b2aa8441f288 557 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 436 552 2.9E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS04555 3ca5305a92499caaa4a878e53a1cf7b0 274 Gene3D G3DSA:3.40.50.1820 7 258 7.6E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS04555 3ca5305a92499caaa4a878e53a1cf7b0 274 Pfam PF12697 Alpha/beta hydrolase family 11 252 3.1E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS04555 3ca5305a92499caaa4a878e53a1cf7b0 274 SUPERFAMILY SSF53474 7 258 2.92E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS04555 3ca5305a92499caaa4a878e53a1cf7b0 274 PANTHER PTHR11614:SF89 7 258 1.9E-20 T 22-04-2016 RPIC12D_RS04555 3ca5305a92499caaa4a878e53a1cf7b0 274 PANTHER PTHR11614 7 258 1.9E-20 T 22-04-2016 RPIC12D_RS00850 77b185c847950cfa8aedc2ac20ed19ce 259 Pfam PF05036 Sporulation related domain 177 240 3.4E-5 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RPIC12D_RS00850 77b185c847950cfa8aedc2ac20ed19ce 259 SUPERFAMILY SSF110997 138 209 2.14E-10 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RPIC12D_RS00850 77b185c847950cfa8aedc2ac20ed19ce 259 Gene3D G3DSA:3.30.70.1070 138 210 6.3E-7 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RPIC12D_RS12960 66a25dee3e280eefedeb7cabbb07e7df 337 Gene3D G3DSA:3.30.420.40 1 72 5.4E-4 T 22-04-2016 RPIC12D_RS12960 66a25dee3e280eefedeb7cabbb07e7df 337 Pfam PF05035 2-keto-3-deoxy-galactonokinase 7 290 2.1E-41 T 22-04-2016 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130|UniPathway: UPA00081 RPIC12D_RS12980 8fb204876545e3d64ab74895d2b22f70 249 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 10 247 2.3E-53 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS12980 8fb204876545e3d64ab74895d2b22f70 249 PANTHER PTHR30027:SF3 1 249 1.2E-76 T 22-04-2016 RPIC12D_RS12980 8fb204876545e3d64ab74895d2b22f70 249 PIRSF PIRSF015601 3 249 1.4E-55 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS12980 8fb204876545e3d64ab74895d2b22f70 249 Gene3D G3DSA:3.40.1280.10 3 248 8.8E-81 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIC12D_RS12980 8fb204876545e3d64ab74895d2b22f70 249 SUPERFAMILY SSF75217 73 248 1.35E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RPIC12D_RS12980 8fb204876545e3d64ab74895d2b22f70 249 PANTHER PTHR30027 1 249 1.2E-76 T 22-04-2016 RPIC12D_RS12980 8fb204876545e3d64ab74895d2b22f70 249 SUPERFAMILY SSF88697 3 69 4.31E-15 T 22-04-2016 IPR015947 PUA-like domain RPIC12D_RS12980 8fb204876545e3d64ab74895d2b22f70 249 Pfam PF04452 RNA methyltransferase 18 243 1.6E-68 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS09405 af84d30ba4e8f4748b392383a7fe2c26 389 PANTHER PTHR30482:SF4 127 365 3.6E-171 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC RPIC12D_RS09405 af84d30ba4e8f4748b392383a7fe2c26 389 PANTHER PTHR30482:SF4 3 100 3.6E-171 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC RPIC12D_RS09405 af84d30ba4e8f4748b392383a7fe2c26 389 PANTHER PTHR30482 127 365 3.6E-171 T 22-04-2016 RPIC12D_RS09405 af84d30ba4e8f4748b392383a7fe2c26 389 PANTHER PTHR30482 3 100 3.6E-171 T 22-04-2016 RPIC12D_RS09405 af84d30ba4e8f4748b392383a7fe2c26 389 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 48 362 2.2E-134 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC RPIC12D_RS09405 af84d30ba4e8f4748b392383a7fe2c26 389 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 351 9.0E-42 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS13225 70e745bbbeb8da09c0ea6f2e98fb1358 198 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 31 174 7.3E-22 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RPIC12D_RS13225 70e745bbbeb8da09c0ea6f2e98fb1358 198 SUPERFAMILY SSF55846 8 185 1.57E-61 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RPIC12D_RS13225 70e745bbbeb8da09c0ea6f2e98fb1358 198 PANTHER PTHR30417:SF4 10 183 9.9E-58 T 22-04-2016 RPIC12D_RS13225 70e745bbbeb8da09c0ea6f2e98fb1358 198 PANTHER PTHR30417 10 183 9.9E-58 T 22-04-2016 RPIC12D_RS13225 70e745bbbeb8da09c0ea6f2e98fb1358 198 SMART SM00644 21 173 5.9E-51 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RPIC12D_RS13225 70e745bbbeb8da09c0ea6f2e98fb1358 198 Gene3D G3DSA:3.40.80.10 10 185 1.3E-66 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RPIC12D_RS04305 1936bb7eb861763a7f3e269d7259919b 266 Gene3D G3DSA:3.40.190.10 28 158 4.0E-58 T 22-04-2016 RPIC12D_RS04305 1936bb7eb861763a7f3e269d7259919b 266 SUPERFAMILY SSF53850 30 266 9.42E-90 T 22-04-2016 RPIC12D_RS04305 1936bb7eb861763a7f3e269d7259919b 266 PANTHER PTHR30429 2 266 7.9E-132 T 22-04-2016 IPR004872 Lipoprotein NlpA family RPIC12D_RS04305 1936bb7eb861763a7f3e269d7259919b 266 Pfam PF03180 NLPA lipoprotein 31 266 9.9E-95 T 22-04-2016 IPR004872 Lipoprotein NlpA family RPIC12D_RS04305 1936bb7eb861763a7f3e269d7259919b 266 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 24 266 6.0E-78 T 22-04-2016 IPR004872 Lipoprotein NlpA family RPIC12D_RS04305 1936bb7eb861763a7f3e269d7259919b 266 PIRSF PIRSF002854 3 266 1.2E-106 T 22-04-2016 IPR004872 Lipoprotein NlpA family RPIC12D_RS16990 668d592874320d60297c0209c537148f 192 Pfam PF00072 Response regulator receiver domain 8 127 4.8E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS16990 668d592874320d60297c0209c537148f 192 Gene3D G3DSA:1.10.10.60 139 190 1.3E-27 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS16990 668d592874320d60297c0209c537148f 192 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 154 171 3.0E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS16990 668d592874320d60297c0209c537148f 192 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 171 191 3.0E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS16990 668d592874320d60297c0209c537148f 192 SMART SM00448 5 127 8.8E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS16990 668d592874320d60297c0209c537148f 192 PANTHER PTHR26402 5 128 2.1E-32 T 22-04-2016 RPIC12D_RS16990 668d592874320d60297c0209c537148f 192 PANTHER PTHR26402:SF344 5 128 2.1E-32 T 22-04-2016 RPIC12D_RS16990 668d592874320d60297c0209c537148f 192 Gene3D G3DSA:3.40.50.2300 8 135 1.7E-25 T 22-04-2016 RPIC12D_RS16990 668d592874320d60297c0209c537148f 192 SUPERFAMILY SSF52172 7 176 6.04E-24 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS16990 668d592874320d60297c0209c537148f 192 Pfam PF02954 Bacterial regulatory protein, Fis family 148 187 9.9E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC12D_RS16620 5a62588ef3a25e44976f6fe26474f0f7 553 Gene3D G3DSA:2.40.110.10 180 282 8.2E-19 T 22-04-2016 RPIC12D_RS16620 5a62588ef3a25e44976f6fe26474f0f7 553 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 405 424 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RPIC12D_RS16620 5a62588ef3a25e44976f6fe26474f0f7 553 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 180 280 1.2E-15 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC12D_RS16620 5a62588ef3a25e44976f6fe26474f0f7 553 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 291 446 2.9E-33 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS16620 5a62588ef3a25e44976f6fe26474f0f7 553 Gene3D G3DSA:1.20.140.10 283 452 2.1E-39 T 22-04-2016 RPIC12D_RS16620 5a62588ef3a25e44976f6fe26474f0f7 553 PANTHER PTHR10909 31 466 2.4E-170 T 22-04-2016 RPIC12D_RS16620 5a62588ef3a25e44976f6fe26474f0f7 553 SUPERFAMILY SSF56645 54 298 4.58E-32 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC12D_RS16620 5a62588ef3a25e44976f6fe26474f0f7 553 SUPERFAMILY SSF47203 296 452 5.96E-42 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS16620 5a62588ef3a25e44976f6fe26474f0f7 553 PANTHER PTHR10909:SF289 31 466 2.4E-170 T 22-04-2016 RPIC12D_RS13155 c8d00adabf811beb61136855c740f1b5 191 Pfam PF07382 Histone H1-like nucleoprotein HC2 1 190 1.3E-20 T 22-04-2016 IPR009970 Histone H1-like nucleoprotein HC2 GO:0003677|GO:0030261 RPIC12D_RS10930 314106d11002037cbf26ff94d4f0100a 759 SUPERFAMILY SSF53383 152 612 5.08E-113 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS10930 314106d11002037cbf26ff94d4f0100a 759 Gene3D G3DSA:3.40.640.10 152 457 2.1E-112 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS10930 314106d11002037cbf26ff94d4f0100a 759 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 393 407 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RPIC12D_RS10930 314106d11002037cbf26ff94d4f0100a 759 SUPERFAMILY SSF55904 615 758 1.02E-44 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RPIC12D_RS10930 314106d11002037cbf26ff94d4f0100a 759 PIRSF PIRSF009393 1 759 6.8E-288 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 RPIC12D_RS10930 314106d11002037cbf26ff94d4f0100a 759 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 20 146 2.2E-39 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 RPIC12D_RS10930 314106d11002037cbf26ff94d4f0100a 759 PANTHER PTHR11751 153 504 5.6E-141 T 22-04-2016 RPIC12D_RS10930 314106d11002037cbf26ff94d4f0100a 759 PANTHER PTHR11751 532 540 5.6E-141 T 22-04-2016 RPIC12D_RS10930 314106d11002037cbf26ff94d4f0100a 759 PANTHER PTHR11751 557 680 5.6E-141 T 22-04-2016 RPIC12D_RS10930 314106d11002037cbf26ff94d4f0100a 759 Gene3D G3DSA:3.90.1150.10 460 636 7.8E-70 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS10930 314106d11002037cbf26ff94d4f0100a 759 PANTHER PTHR11751:SF406 153 504 5.6E-141 T 22-04-2016 RPIC12D_RS10930 314106d11002037cbf26ff94d4f0100a 759 PANTHER PTHR11751:SF406 532 540 5.6E-141 T 22-04-2016 RPIC12D_RS10930 314106d11002037cbf26ff94d4f0100a 759 PANTHER PTHR11751:SF406 557 680 5.6E-141 T 22-04-2016 RPIC12D_RS10930 314106d11002037cbf26ff94d4f0100a 759 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 620 745 7.7E-46 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RPIC12D_RS10930 314106d11002037cbf26ff94d4f0100a 759 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 152 593 5.3E-153 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RPIC12D_RS10930 314106d11002037cbf26ff94d4f0100a 759 Gene3D G3DSA:3.90.100.10 637 758 1.5E-34 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RPIC12D_RS09300 0fe7dcb501e08ef22bd518745c63f089 133 Gene3D G3DSA:3.10.180.10 9 119 5.7E-11 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS09300 0fe7dcb501e08ef22bd518745c63f089 133 SUPERFAMILY SSF54593 8 123 3.47E-14 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS04140 fd503fe82628759b6706e76f1d2508d7 195 PANTHER PTHR33420 11 195 3.7E-14 T 22-04-2016 RPIC12D_RS04140 fd503fe82628759b6706e76f1d2508d7 195 SUPERFAMILY SSF49401 32 195 2.98E-15 T 22-04-2016 IPR008966 Adhesion domain RPIC12D_RS04140 fd503fe82628759b6706e76f1d2508d7 195 Gene3D G3DSA:2.60.40.1090 30 195 1.0E-19 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RPIC12D_RS04140 fd503fe82628759b6706e76f1d2508d7 195 PANTHER PTHR33420:SF8 11 195 3.7E-14 T 22-04-2016 RPIC12D_RS04140 fd503fe82628759b6706e76f1d2508d7 195 Pfam PF00419 Fimbrial protein 32 194 4.5E-14 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RPIC12D_RS07570 5d5ba8151436cac53daf3037b20468a3 217 Pfam PF11745 Protein of unknown function (DUF3304) 17 148 3.5E-31 T 22-04-2016 IPR021733 Protein of unknown function DUF3304 RPIC12D_RS03815 52afb6f1f34a14cb9f74a7dfadf33d25 224 Gene3D G3DSA:3.40.50.300 4 218 2.0E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03815 52afb6f1f34a14cb9f74a7dfadf33d25 224 PANTHER PTHR24220 15 218 5.1E-44 T 22-04-2016 RPIC12D_RS03815 52afb6f1f34a14cb9f74a7dfadf33d25 224 SMART SM00382 28 217 2.0E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS03815 52afb6f1f34a14cb9f74a7dfadf33d25 224 Pfam PF00005 ABC transporter 19 166 1.4E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS03815 52afb6f1f34a14cb9f74a7dfadf33d25 224 SUPERFAMILY SSF52540 14 218 1.42E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01590 7603bb94eaeedccba265d7a1638ff754 565 SUPERFAMILY SSF54637 465 556 9.95E-15 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS01590 7603bb94eaeedccba265d7a1638ff754 565 Gene3D G3DSA:3.40.50.980 128 290 1.6E-14 T 22-04-2016 RPIC12D_RS01590 7603bb94eaeedccba265d7a1638ff754 565 SUPERFAMILY SSF56801 16 455 3.92E-45 T 22-04-2016 RPIC12D_RS01590 7603bb94eaeedccba265d7a1638ff754 565 PANTHER PTHR24096 114 284 4.7E-12 T 22-04-2016 RPIC12D_RS01590 7603bb94eaeedccba265d7a1638ff754 565 Pfam PF00501 AMP-binding enzyme 121 327 1.2E-18 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC12D_RS01590 7603bb94eaeedccba265d7a1638ff754 565 Gene3D G3DSA:3.10.129.10 465 555 2.5E-13 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS01590 7603bb94eaeedccba265d7a1638ff754 565 Gene3D G3DSA:3.30.300.30 348 456 2.6E-9 T 22-04-2016 RPIC12D_RS02305 724295507d2db0d66248a7b97f798aab 231 Pfam PF03741 Integral membrane protein TerC family 15 189 2.6E-44 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 RPIC12D_RS02305 724295507d2db0d66248a7b97f798aab 231 PANTHER PTHR30060 1 191 3.2E-36 T 22-04-2016 RPIC12D_RS02305 724295507d2db0d66248a7b97f798aab 231 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 12 190 1.0E-68 T 22-04-2016 IPR022301 Integral membrane protein YjbE RPIC12D_RS03600 0d33575b31ce472d12253038e2aac0de 154 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 154 81.059 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RPIC12D_RS03600 0d33575b31ce472d12253038e2aac0de 154 PANTHER PTHR30455:SF2 2 149 1.3E-60 T 22-04-2016 RPIC12D_RS03600 0d33575b31ce472d12253038e2aac0de 154 PANTHER PTHR30455 2 149 1.3E-60 T 22-04-2016 RPIC12D_RS03600 0d33575b31ce472d12253038e2aac0de 154 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 3.1E-55 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RPIC12D_RS03600 0d33575b31ce472d12253038e2aac0de 154 Pfam PF03477 ATP cone domain 51 136 1.4E-13 T 22-04-2016 IPR005144 ATP-cone domain RPIC12D_RS08080 f42ae5ad238fe45096c453a4c597d98d 241 PANTHER PTHR30296 2 238 1.3E-91 T 22-04-2016 RPIC12D_RS08080 f42ae5ad238fe45096c453a4c597d98d 241 PANTHER PTHR30296:SF0 2 238 1.3E-91 T 22-04-2016 RPIC12D_RS08080 f42ae5ad238fe45096c453a4c597d98d 241 Pfam PF02754 Cysteine-rich domain 3 84 3.9E-15 T 22-04-2016 IPR004017 Cysteine-rich domain RPIC12D_RS08080 f42ae5ad238fe45096c453a4c597d98d 241 Pfam PF02754 Cysteine-rich domain 132 216 1.0E-14 T 22-04-2016 IPR004017 Cysteine-rich domain RPIC12D_RS07105 46f62c2bbb91a2f327f4598709047007 268 SUPERFAMILY SSF56176 1 169 2.09E-46 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS07105 46f62c2bbb91a2f327f4598709047007 268 Gene3D G3DSA:3.30.43.10 1 51 5.4E-19 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RPIC12D_RS07105 46f62c2bbb91a2f327f4598709047007 268 PANTHER PTHR11908 3 264 6.2E-65 T 22-04-2016 RPIC12D_RS07105 46f62c2bbb91a2f327f4598709047007 268 Gene3D G3DSA:3.30.390.50 171 264 2.2E-16 T 22-04-2016 RPIC12D_RS07105 46f62c2bbb91a2f327f4598709047007 268 PANTHER PTHR11908:SF68 3 264 6.2E-65 T 22-04-2016 RPIC12D_RS07105 46f62c2bbb91a2f327f4598709047007 268 SMART SM01092 171 263 2.8E-20 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC12D_RS07105 46f62c2bbb91a2f327f4598709047007 268 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 193 262 6.9E-6 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC12D_RS07105 46f62c2bbb91a2f327f4598709047007 268 Gene3D G3DSA:3.30.465.10 55 167 5.1E-30 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC12D_RS07105 46f62c2bbb91a2f327f4598709047007 268 SUPERFAMILY SSF55447 169 264 8.11E-20 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC12D_RS07105 46f62c2bbb91a2f327f4598709047007 268 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 167 3.5E-45 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 RPIC12D_RS11800 8ffa675e1d328c6ffba4a6ec7f343e58 155 SUPERFAMILY SSF141488 67 147 7.19E-20 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor RPIC12D_RS11800 8ffa675e1d328c6ffba4a6ec7f343e58 155 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 72 134 1.7E-17 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor RPIC12D_RS07335 0d442173d828770666914f0a3f3990f7 284 Gene3D G3DSA:1.25.40.20 39 231 4.4E-43 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RPIC12D_RS07335 0d442173d828770666914f0a3f3990f7 284 PRINTS PR01415 Ankyrin repeat signature 130 145 1.4E-8 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC12D_RS07335 0d442173d828770666914f0a3f3990f7 284 PRINTS PR01415 Ankyrin repeat signature 178 192 1.4E-8 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC12D_RS07335 0d442173d828770666914f0a3f3990f7 284 Pfam PF12796 Ankyrin repeats (3 copies) 114 193 3.7E-18 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RPIC12D_RS07335 0d442173d828770666914f0a3f3990f7 284 PANTHER PTHR24198 36 218 8.9E-37 T 22-04-2016 RPIC12D_RS07335 0d442173d828770666914f0a3f3990f7 284 SUPERFAMILY SSF48403 36 216 5.29E-40 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RPIC12D_RS07335 0d442173d828770666914f0a3f3990f7 284 SMART SM00248 98 128 84.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC12D_RS07335 0d442173d828770666914f0a3f3990f7 284 SMART SM00248 64 92 360.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC12D_RS07335 0d442173d828770666914f0a3f3990f7 284 SMART SM00248 129 158 6.2E-6 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC12D_RS07335 0d442173d828770666914f0a3f3990f7 284 SMART SM00248 162 191 4.3E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC12D_RS10280 f95e90731e8cf273ece0b062a0bc6728 444 Gene3D G3DSA:3.50.50.60 14 126 1.0E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10280 f95e90731e8cf273ece0b062a0bc6728 444 SUPERFAMILY SSF51905 13 355 5.83E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10280 f95e90731e8cf273ece0b062a0bc6728 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 15 37 3.3E-7 T 22-04-2016 RPIC12D_RS10280 f95e90731e8cf273ece0b062a0bc6728 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 319 326 3.3E-7 T 22-04-2016 RPIC12D_RS10280 f95e90731e8cf273ece0b062a0bc6728 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 181 206 3.3E-7 T 22-04-2016 RPIC12D_RS10280 f95e90731e8cf273ece0b062a0bc6728 444 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 348 1.9E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10280 f95e90731e8cf273ece0b062a0bc6728 444 PANTHER PTHR22912 1 161 5.5E-19 T 22-04-2016 RPIC12D_RS10280 f95e90731e8cf273ece0b062a0bc6728 444 PANTHER PTHR22912 218 330 5.5E-19 T 22-04-2016 RPIC12D_RS10280 f95e90731e8cf273ece0b062a0bc6728 444 PANTHER PTHR22912 180 201 5.5E-19 T 22-04-2016 RPIC12D_RS10280 f95e90731e8cf273ece0b062a0bc6728 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 181 199 1.1E-10 T 22-04-2016 RPIC12D_RS10280 f95e90731e8cf273ece0b062a0bc6728 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 1.1E-10 T 22-04-2016 RPIC12D_RS10280 f95e90731e8cf273ece0b062a0bc6728 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 123 141 1.1E-10 T 22-04-2016 RPIC12D_RS10280 f95e90731e8cf273ece0b062a0bc6728 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 304 326 1.1E-10 T 22-04-2016 RPIC12D_RS10280 f95e90731e8cf273ece0b062a0bc6728 444 Gene3D G3DSA:3.50.50.60 127 355 3.5E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS05265 71dd9cfb469dab6ba4329f435b1e9dbb 244 Gene3D G3DSA:3.40.30.10 79 194 5.6E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS05265 71dd9cfb469dab6ba4329f435b1e9dbb 244 Pfam PF05988 Bacterial protein of unknown function (DUF899) 1 232 1.7E-91 T 22-04-2016 IPR010296 Protein of unknown function DUF899, thioredoxin-like RPIC12D_RS05265 71dd9cfb469dab6ba4329f435b1e9dbb 244 SUPERFAMILY SSF52833 81 153 1.0E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS16400 28f1072ec9118f34271d0a461a75ac20 268 Pfam PF03180 NLPA lipoprotein 30 268 2.3E-93 T 22-04-2016 IPR004872 Lipoprotein NlpA family RPIC12D_RS16400 28f1072ec9118f34271d0a461a75ac20 268 Gene3D G3DSA:3.40.190.10 27 157 2.2E-56 T 22-04-2016 RPIC12D_RS16400 28f1072ec9118f34271d0a461a75ac20 268 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 266 7.9E-84 T 22-04-2016 IPR004872 Lipoprotein NlpA family RPIC12D_RS16400 28f1072ec9118f34271d0a461a75ac20 268 PIRSF PIRSF002854 1 268 1.6E-103 T 22-04-2016 IPR004872 Lipoprotein NlpA family RPIC12D_RS16400 28f1072ec9118f34271d0a461a75ac20 268 SUPERFAMILY SSF53850 29 268 1.15E-87 T 22-04-2016 RPIC12D_RS16400 28f1072ec9118f34271d0a461a75ac20 268 PANTHER PTHR30429 1 268 2.1E-123 T 22-04-2016 IPR004872 Lipoprotein NlpA family RPIC12D_RS00365 2cfca67c5dbbb5b6f4e1ada674d318b0 596 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 173 4.0E-50 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RPIC12D_RS00365 2cfca67c5dbbb5b6f4e1ada674d318b0 596 PANTHER PTHR18968 1 568 1.9E-233 T 22-04-2016 RPIC12D_RS00365 2cfca67c5dbbb5b6f4e1ada674d318b0 596 SUPERFAMILY SSF52518 365 564 6.43E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS00365 2cfca67c5dbbb5b6f4e1ada674d318b0 596 Gene3D G3DSA:3.40.50.970 347 554 2.3E-52 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS00365 2cfca67c5dbbb5b6f4e1ada674d318b0 596 Gene3D G3DSA:3.40.50.970 2 176 2.5E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS00365 2cfca67c5dbbb5b6f4e1ada674d318b0 596 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 425 444 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 RPIC12D_RS00365 2cfca67c5dbbb5b6f4e1ada674d318b0 596 PANTHER PTHR18968:SF124 1 568 1.9E-233 T 22-04-2016 RPIC12D_RS00365 2cfca67c5dbbb5b6f4e1ada674d318b0 596 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 328 3.1E-25 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RPIC12D_RS00365 2cfca67c5dbbb5b6f4e1ada674d318b0 596 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 388 543 3.8E-26 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RPIC12D_RS00365 2cfca67c5dbbb5b6f4e1ada674d318b0 596 SUPERFAMILY SSF52518 3 175 2.8E-47 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS00365 2cfca67c5dbbb5b6f4e1ada674d318b0 596 Gene3D G3DSA:3.40.50.1220 193 346 1.7E-39 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC12D_RS00365 2cfca67c5dbbb5b6f4e1ada674d318b0 596 SUPERFAMILY SSF52467 189 357 8.44E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC12D_RS00675 26700e0be37757fa764559b4f565b79f 393 PANTHER PTHR10909:SF326 9 393 2.3E-261 T 22-04-2016 RPIC12D_RS00675 26700e0be37757fa764559b4f565b79f 393 SUPERFAMILY SSF47203 233 389 8.7E-44 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS00675 26700e0be37757fa764559b4f565b79f 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 124 7.0E-38 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS00675 26700e0be37757fa764559b4f565b79f 393 Gene3D G3DSA:1.20.140.10 224 390 1.7E-61 T 22-04-2016 RPIC12D_RS00675 26700e0be37757fa764559b4f565b79f 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 388 2.6E-38 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC12D_RS00675 26700e0be37757fa764559b4f565b79f 393 PANTHER PTHR10909 9 393 2.3E-261 T 22-04-2016 RPIC12D_RS00675 26700e0be37757fa764559b4f565b79f 393 SUPERFAMILY SSF56645 6 248 6.54E-88 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC12D_RS00675 26700e0be37757fa764559b4f565b79f 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 223 1.0E-27 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC12D_RS00675 26700e0be37757fa764559b4f565b79f 393 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 347 366 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RPIC12D_RS00675 26700e0be37757fa764559b4f565b79f 393 Gene3D G3DSA:2.40.110.10 127 223 5.8E-42 T 22-04-2016 RPIC12D_RS00675 26700e0be37757fa764559b4f565b79f 393 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 130 142 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RPIC12D_RS00675 26700e0be37757fa764559b4f565b79f 393 Gene3D G3DSA:1.10.540.10 4 126 1.3E-43 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC12D_RS08440 014c8718675fc0fc30cc75dd1d3134cd 172 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 20 162 3.8E-39 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN RPIC12D_RS08440 014c8718675fc0fc30cc75dd1d3134cd 172 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 16 166 9.6E-39 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN RPIC12D_RS08440 014c8718675fc0fc30cc75dd1d3134cd 172 PANTHER PTHR37625:SF2 25 162 2.0E-37 T 22-04-2016 RPIC12D_RS08440 014c8718675fc0fc30cc75dd1d3134cd 172 PANTHER PTHR37625 25 162 2.0E-37 T 22-04-2016 RPIC12D_RS10420 ec18ce2ef8a9ab97a4995bed5fbafc34 281 SUPERFAMILY SSF53850 13 263 1.7E-60 T 22-04-2016 RPIC12D_RS10420 ec18ce2ef8a9ab97a4995bed5fbafc34 281 Gene3D G3DSA:3.40.190.10 223 263 3.5E-33 T 22-04-2016 RPIC12D_RS10420 ec18ce2ef8a9ab97a4995bed5fbafc34 281 Gene3D G3DSA:3.40.190.10 36 118 3.5E-33 T 22-04-2016 RPIC12D_RS10420 ec18ce2ef8a9ab97a4995bed5fbafc34 281 PANTHER PTHR18966 14 276 4.5E-45 T 22-04-2016 RPIC12D_RS10420 ec18ce2ef8a9ab97a4995bed5fbafc34 281 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 64 77 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 RPIC12D_RS10420 ec18ce2ef8a9ab97a4995bed5fbafc34 281 PANTHER PTHR18966:SF191 14 276 4.5E-45 T 22-04-2016 RPIC12D_RS10420 ec18ce2ef8a9ab97a4995bed5fbafc34 281 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 261 1.0E-54 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS10420 ec18ce2ef8a9ab97a4995bed5fbafc34 281 SMART SM00062 39 263 1.2E-58 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS10420 ec18ce2ef8a9ab97a4995bed5fbafc34 281 Gene3D G3DSA:3.40.190.10 119 222 3.3E-20 T 22-04-2016 RPIC12D_RS15240 34f4782ccf04d5f23211efd4e52ece96 247 Gene3D G3DSA:3.10.350.10 158 195 1.7E-7 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS15240 34f4782ccf04d5f23211efd4e52ece96 247 Pfam PF01476 LysM domain 158 195 4.5E-6 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS15240 34f4782ccf04d5f23211efd4e52ece96 247 SMART SM00257 155 197 7.4E-6 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS15240 34f4782ccf04d5f23211efd4e52ece96 247 SUPERFAMILY SSF54106 156 194 1.12E-5 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS04915 f49c2e49bfb4ac03e58553abc38a9694 79 Pfam PF00550 Phosphopantetheine attachment site 7 72 6.9E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RPIC12D_RS04915 f49c2e49bfb4ac03e58553abc38a9694 79 SUPERFAMILY SSF47336 2 77 2.22E-22 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RPIC12D_RS04915 f49c2e49bfb4ac03e58553abc38a9694 79 Gene3D G3DSA:1.10.1200.10 3 77 3.0E-34 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RPIC12D_RS04915 f49c2e49bfb4ac03e58553abc38a9694 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 75 9.0E-13 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RPIC12D_RS04915 f49c2e49bfb4ac03e58553abc38a9694 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.983 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RPIC12D_RS04915 f49c2e49bfb4ac03e58553abc38a9694 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 74 1.7E-34 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RPIC12D_RS04915 f49c2e49bfb4ac03e58553abc38a9694 79 PANTHER PTHR20863 4 73 5.5E-29 T 22-04-2016 RPIC12D_RS04915 f49c2e49bfb4ac03e58553abc38a9694 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site RPIC12D_RS05820 0836a210f26c2802f306bef61f2f98b1 417 Pfam PF01926 50S ribosome-binding GTPase 204 322 2.0E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS05820 0836a210f26c2802f306bef61f2f98b1 417 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 13 366 1.5E-141 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 RPIC12D_RS05820 0836a210f26c2802f306bef61f2f98b1 417 PANTHER PTHR10229:SF0 10 366 1.1E-146 T 22-04-2016 RPIC12D_RS05820 0836a210f26c2802f306bef61f2f98b1 417 Hamap MF_00900 GTPase HflX [hflX]. 30 382 44.042 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 RPIC12D_RS05820 0836a210f26c2802f306bef61f2f98b1 417 PANTHER PTHR10229 10 366 1.1E-146 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 RPIC12D_RS05820 0836a210f26c2802f306bef61f2f98b1 417 SUPERFAMILY SSF52540 202 369 8.79E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05820 0836a210f26c2802f306bef61f2f98b1 417 PIRSF PIRSF006809 5 376 1.1E-134 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 RPIC12D_RS05820 0836a210f26c2802f306bef61f2f98b1 417 Gene3D G3DSA:3.40.50.300 202 367 2.6E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05820 0836a210f26c2802f306bef61f2f98b1 417 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 271 289 1.1E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS05820 0836a210f26c2802f306bef61f2f98b1 417 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 204 224 1.1E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC12D_RS05820 0836a210f26c2802f306bef61f2f98b1 417 Pfam PF16360 GTP-binding GTPase Middle Region 117 196 2.1E-24 T 22-04-2016 IPR032305 GTP-binding protein, middle domain RPIC12D_RS05820 0836a210f26c2802f306bef61f2f98b1 417 Pfam PF13167 GTP-binding GTPase N-terminal 28 114 1.0E-28 T 22-04-2016 IPR025121 GTPase HflX, N-terminal RPIC12D_RS05060 d16a172ee5b0a08975a6c28e4f42f2e8 83 Pfam PF04226 Transglycosylase associated protein 34 80 5.4E-9 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 RPIC12D_RS05060 d16a172ee5b0a08975a6c28e4f42f2e8 83 PANTHER PTHR33884:SF1 6 83 3.3E-16 T 22-04-2016 RPIC12D_RS05060 d16a172ee5b0a08975a6c28e4f42f2e8 83 PANTHER PTHR33884 6 83 3.3E-16 T 22-04-2016 RPIC12D_RS10905 9bc3446891e42edaaf58359dbdfbcf44 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 5.1E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS10905 9bc3446891e42edaaf58359dbdfbcf44 294 Gene3D G3DSA:3.40.190.10 185 251 5.0E-4 T 22-04-2016 RPIC12D_RS10905 9bc3446891e42edaaf58359dbdfbcf44 294 Gene3D G3DSA:1.10.10.10 4 86 3.4E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS10905 9bc3446891e42edaaf58359dbdfbcf44 294 SUPERFAMILY SSF46785 2 111 1.42E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS10905 9bc3446891e42edaaf58359dbdfbcf44 294 PANTHER PTHR30537 1 287 3.2E-85 T 22-04-2016 RPIC12D_RS10905 9bc3446891e42edaaf58359dbdfbcf44 294 PANTHER PTHR30537:SF3 1 287 3.2E-85 T 22-04-2016 RPIC12D_RS10905 9bc3446891e42edaaf58359dbdfbcf44 294 Gene3D G3DSA:3.40.190.10 91 184 1.9E-19 T 22-04-2016 RPIC12D_RS10905 9bc3446891e42edaaf58359dbdfbcf44 294 Pfam PF03466 LysR substrate binding domain 87 285 7.0E-37 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS10905 9bc3446891e42edaaf58359dbdfbcf44 294 SUPERFAMILY SSF53850 87 287 2.35E-41 T 22-04-2016 RPIC12D_RS01865 cd03d48700f7c299912ef6bb4aa9d38c 244 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS01865 cd03d48700f7c299912ef6bb4aa9d38c 244 Pfam PF00005 ABC transporter 18 165 3.2E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS01865 cd03d48700f7c299912ef6bb4aa9d38c 244 SUPERFAMILY SSF52540 1 226 2.84E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01865 cd03d48700f7c299912ef6bb4aa9d38c 244 PIRSF PIRSF039085 1 243 6.2E-100 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RPIC12D_RS01865 cd03d48700f7c299912ef6bb4aa9d38c 244 PANTHER PTHR24220 3 244 1.7E-178 T 22-04-2016 RPIC12D_RS01865 cd03d48700f7c299912ef6bb4aa9d38c 244 PANTHER PTHR24220:SF317 3 244 1.7E-178 T 22-04-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 RPIC12D_RS01865 cd03d48700f7c299912ef6bb4aa9d38c 244 SMART SM00382 26 213 2.6E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS01865 cd03d48700f7c299912ef6bb4aa9d38c 244 Gene3D G3DSA:3.40.50.300 1 226 3.0E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS02960 68ecbb5f55a92e05e049151b2a6cb46e 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 159 6.2E-9 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC12D_RS02960 68ecbb5f55a92e05e049151b2a6cb46e 214 Gene3D G3DSA:2.160.10.10 46 181 1.3E-35 T 22-04-2016 RPIC12D_RS02960 68ecbb5f55a92e05e049151b2a6cb46e 214 PANTHER PTHR23416 59 184 1.6E-23 T 22-04-2016 RPIC12D_RS02960 68ecbb5f55a92e05e049151b2a6cb46e 214 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 59 88 1.8E-4 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC12D_RS02960 68ecbb5f55a92e05e049151b2a6cb46e 214 SUPERFAMILY SSF51161 54 179 4.99E-33 T 22-04-2016 IPR011004 Trimeric LpxA-like RPIC12D_RS00740 35a34fcd8550cc7c2ee8789e1fed890c 480 PANTHER PTHR24421 156 461 5.4E-46 T 22-04-2016 RPIC12D_RS00740 35a34fcd8550cc7c2ee8789e1fed890c 480 SMART SM00387 352 448 9.8E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS00740 35a34fcd8550cc7c2ee8789e1fed890c 480 SUPERFAMILY SSF55874 335 446 3.01E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS00740 35a34fcd8550cc7c2ee8789e1fed890c 480 Pfam PF05227 CHASE3 domain 37 166 1.6E-29 T 22-04-2016 IPR007891 CHASE3 RPIC12D_RS00740 35a34fcd8550cc7c2ee8789e1fed890c 480 Pfam PF07730 Histidine kinase 247 313 2.7E-14 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RPIC12D_RS00740 35a34fcd8550cc7c2ee8789e1fed890c 480 Gene3D G3DSA:3.30.565.10 340 445 4.4E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS00740 35a34fcd8550cc7c2ee8789e1fed890c 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 446 4.4E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS13030 ddbd4bd71d70eefa2c87ccdb5904b516 143 SUPERFAMILY SSF53933 48 142 3.02E-36 T 22-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 RPIC12D_RS13030 ddbd4bd71d70eefa2c87ccdb5904b516 143 Gene3D G3DSA:3.10.450.30 49 142 3.4E-41 T 22-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 RPIC12D_RS13030 ddbd4bd71d70eefa2c87ccdb5904b516 143 Pfam PF00545 ribonuclease 57 140 7.6E-31 T 22-04-2016 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 RPIC12D_RS09290 b7fa017926a0ed79fb6151a2008a4805 244 SMART SM00855 11 173 1.1E-11 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC12D_RS09290 b7fa017926a0ed79fb6151a2008a4805 244 Gene3D G3DSA:3.40.50.1240 9 214 4.0E-33 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC12D_RS09290 b7fa017926a0ed79fb6151a2008a4805 244 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 12 203 1.7E-34 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC12D_RS09290 b7fa017926a0ed79fb6151a2008a4805 244 SUPERFAMILY SSF53254 10 214 5.63E-37 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC12D_RS09290 b7fa017926a0ed79fb6151a2008a4805 244 PANTHER PTHR23029 5 216 8.2E-28 T 22-04-2016 RPIC12D_RS10055 ba2e83192f3141da0cd6fbb3aae3b5d4 207 SUPERFAMILY SSF52972 9 201 8.5E-56 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RPIC12D_RS10055 ba2e83192f3141da0cd6fbb3aae3b5d4 207 PIRSF PIRSF006305 5 207 7.4E-50 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RPIC12D_RS10055 ba2e83192f3141da0cd6fbb3aae3b5d4 207 Hamap MF_00528 Septum formation protein Maf [maf]. 10 207 31.189 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RPIC12D_RS10055 ba2e83192f3141da0cd6fbb3aae3b5d4 207 Pfam PF02545 Maf-like protein 10 202 9.2E-52 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RPIC12D_RS10055 ba2e83192f3141da0cd6fbb3aae3b5d4 207 TIGRFAM TIGR00172 maf: septum formation protein Maf 10 200 1.1E-46 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RPIC12D_RS10055 ba2e83192f3141da0cd6fbb3aae3b5d4 207 Gene3D G3DSA:3.90.950.10 10 205 3.7E-65 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RPIC12D_RS10040 6d2bfb246934b4ca4bea46356c0fbc46 236 Pfam PF01467 Cytidylyltransferase-like 19 201 1.3E-22 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIC12D_RS10040 6d2bfb246934b4ca4bea46356c0fbc46 236 Gene3D G3DSA:3.40.50.620 16 229 1.0E-61 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS10040 6d2bfb246934b4ca4bea46356c0fbc46 236 SUPERFAMILY SSF52374 14 228 5.91E-48 T 22-04-2016 RPIC12D_RS10040 6d2bfb246934b4ca4bea46356c0fbc46 236 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 15 228 27.066 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 RPIC12D_RS10040 6d2bfb246934b4ca4bea46356c0fbc46 236 PANTHER PTHR39321 12 230 4.4E-30 T 22-04-2016 RPIC12D_RS10040 6d2bfb246934b4ca4bea46356c0fbc46 236 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 19 227 1.0E-42 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 936 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 ProSitePatterns PS00211 ABC transporters family signature. 841 855 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 951 22.319 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 PANTHER PTHR32282:SF2 1 183 0.0 T 22-04-2016 RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 PANTHER PTHR32282:SF2 200 954 0.0 T 22-04-2016 RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 Gene3D G3DSA:1.10.8.280 295 414 3.5E-42 T 22-04-2016 RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 SUPERFAMILY SSF52540 631 924 2.73E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 Gene3D G3DSA:1.20.1580.10 705 831 3.3E-54 T 22-04-2016 RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 PANTHER PTHR32282 1 183 0.0 T 22-04-2016 RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 PANTHER PTHR32282 200 954 0.0 T 22-04-2016 RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 SUPERFAMILY SSF52540 3 204 2.33E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 SUPERFAMILY SSF52540 442 581 2.33E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 Gene3D G3DSA:3.30.1490.20 130 153 7.1E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 Gene3D G3DSA:3.30.1490.20 210 258 7.1E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 Gene3D G3DSA:1.20.1580.10 91 129 1.3E-50 T 22-04-2016 RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 Gene3D G3DSA:1.20.1580.10 415 489 1.3E-50 T 22-04-2016 RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 Gene3D G3DSA:1.20.1580.10 259 292 1.3E-50 T 22-04-2016 RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 Gene3D G3DSA:3.40.50.300 832 949 8.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 Gene3D G3DSA:3.40.50.300 613 691 8.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 Gene3D G3DSA:3.40.50.300 490 608 5.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01505 343958220a65ba7fde45afdcada7146e 954 Gene3D G3DSA:3.40.50.300 3 51 5.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12990 dcf21c31cbe6aef7a0eff7b33ff38c55 314 PANTHER PTHR30126:SF3 11 311 3.5E-90 T 22-04-2016 RPIC12D_RS12990 dcf21c31cbe6aef7a0eff7b33ff38c55 314 SUPERFAMILY SSF46785 10 122 1.33E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12990 dcf21c31cbe6aef7a0eff7b33ff38c55 314 Gene3D G3DSA:3.40.190.10 102 193 6.3E-22 T 22-04-2016 RPIC12D_RS12990 dcf21c31cbe6aef7a0eff7b33ff38c55 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 4.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12990 dcf21c31cbe6aef7a0eff7b33ff38c55 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 4.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12990 dcf21c31cbe6aef7a0eff7b33ff38c55 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 4.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS12990 dcf21c31cbe6aef7a0eff7b33ff38c55 314 Gene3D G3DSA:1.10.10.10 13 94 4.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12990 dcf21c31cbe6aef7a0eff7b33ff38c55 314 SUPERFAMILY SSF53850 102 308 3.06E-36 T 22-04-2016 RPIC12D_RS12990 dcf21c31cbe6aef7a0eff7b33ff38c55 314 PANTHER PTHR30126 11 311 3.5E-90 T 22-04-2016 RPIC12D_RS12990 dcf21c31cbe6aef7a0eff7b33ff38c55 314 Gene3D G3DSA:3.40.190.10 194 277 6.7E-10 T 22-04-2016 RPIC12D_RS12990 dcf21c31cbe6aef7a0eff7b33ff38c55 314 Pfam PF03466 LysR substrate binding domain 100 306 1.4E-32 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS12990 dcf21c31cbe6aef7a0eff7b33ff38c55 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 72 1.2E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS10790 14f24ff720d7c931b7953d7428978429 434 Gene3D G3DSA:1.20.1250.20 12 216 1.1E-21 T 22-04-2016 RPIC12D_RS10790 14f24ff720d7c931b7953d7428978429 434 Gene3D G3DSA:1.20.1250.20 238 422 1.9E-13 T 22-04-2016 RPIC12D_RS10790 14f24ff720d7c931b7953d7428978429 434 ProSitePatterns PS00217 Sugar transport proteins signature 2. 124 149 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS10790 14f24ff720d7c931b7953d7428978429 434 PANTHER PTHR23508:SF1 2 415 4.1E-134 T 22-04-2016 RPIC12D_RS10790 14f24ff720d7c931b7953d7428978429 434 Pfam PF00083 Sugar (and other) transporter 14 230 1.1E-22 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RPIC12D_RS10790 14f24ff720d7c931b7953d7428978429 434 PANTHER PTHR23508 2 415 4.1E-134 T 22-04-2016 RPIC12D_RS10790 14f24ff720d7c931b7953d7428978429 434 SUPERFAMILY SSF103473 10 420 4.19E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS01895 a95f93016a8ca6d3d38a2b2aa42a4afd 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 26.988 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS01895 a95f93016a8ca6d3d38a2b2aa42a4afd 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 1.7E-62 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS01895 a95f93016a8ca6d3d38a2b2aa42a4afd 142 Pfam PF00572 Ribosomal protein L13 15 138 2.3E-54 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS01895 a95f93016a8ca6d3d38a2b2aa42a4afd 142 PANTHER PTHR11545 1 142 1.8E-71 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS01895 a95f93016a8ca6d3d38a2b2aa42a4afd 142 SUPERFAMILY SSF52161 1 139 1.15E-58 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS01895 a95f93016a8ca6d3d38a2b2aa42a4afd 142 PIRSF PIRSF002181 1 142 3.1E-47 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS01895 a95f93016a8ca6d3d38a2b2aa42a4afd 142 Gene3D G3DSA:3.90.1180.10 3 141 3.7E-63 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS14160 30294a6e2f186fe416f0b214ff48702b 309 Gene3D G3DSA:3.90.1680.10 126 291 2.0E-26 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC12D_RS14160 30294a6e2f186fe416f0b214ff48702b 309 Pfam PF02586 SOS response associated peptidase (SRAP) 120 296 1.4E-21 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC12D_RS14160 30294a6e2f186fe416f0b214ff48702b 309 SUPERFAMILY SSF143081 126 301 4.32E-37 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC12D_RS14405 59f2f618c1d6fb9fff14cef3be6ac808 207 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 198 1.3E-59 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RPIC12D_RS14405 59f2f618c1d6fb9fff14cef3be6ac808 207 PANTHER PTHR33508:SF1 1 207 1.7E-72 T 22-04-2016 RPIC12D_RS14405 59f2f618c1d6fb9fff14cef3be6ac808 207 PANTHER PTHR33508 1 207 1.7E-72 T 22-04-2016 RPIC12D_RS14405 59f2f618c1d6fb9fff14cef3be6ac808 207 Pfam PF01914 MarC family integral membrane protein 4 201 3.8E-61 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RPIC12D_RS02165 ccc4b7b9ab4e568630f8f4904324b47c 354 Gene3D G3DSA:1.10.357.10 3 212 2.2E-37 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC12D_RS02165 ccc4b7b9ab4e568630f8f4904324b47c 354 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 6.4E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS02165 ccc4b7b9ab4e568630f8f4904324b47c 354 SUPERFAMILY SSF48498 85 216 2.67E-38 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC12D_RS02165 ccc4b7b9ab4e568630f8f4904324b47c 354 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.0E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS02165 ccc4b7b9ab4e568630f8f4904324b47c 354 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.0E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS02165 ccc4b7b9ab4e568630f8f4904324b47c 354 PANTHER PTHR30055 8 171 3.4E-30 T 22-04-2016 RPIC12D_RS02165 ccc4b7b9ab4e568630f8f4904324b47c 354 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RPIC12D_RS02165 ccc4b7b9ab4e568630f8f4904324b47c 354 SUPERFAMILY SSF46689 6 78 1.13E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS02165 ccc4b7b9ab4e568630f8f4904324b47c 354 PANTHER PTHR30055:SF73 8 171 3.4E-30 T 22-04-2016 RPIC12D_RS01915 09a08aca549508c8a443452c657ec8a2 124 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 105 122 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site RPIC12D_RS01915 09a08aca549508c8a443452c657ec8a2 124 PANTHER PTHR10072 19 124 2.5E-47 T 22-04-2016 RPIC12D_RS01915 09a08aca549508c8a443452c657ec8a2 124 SUPERFAMILY SSF89360 17 110 6.15E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis RPIC12D_RS01915 09a08aca549508c8a443452c657ec8a2 124 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 119 4.2E-21 T 22-04-2016 IPR000361 FeS cluster biogenesis RPIC12D_RS01915 09a08aca549508c8a443452c657ec8a2 124 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 124 36.967 T 22-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 RPIC12D_RS01915 09a08aca549508c8a443452c657ec8a2 124 Gene3D G3DSA:2.60.300.12 16 110 7.2E-34 T 22-04-2016 IPR000361 FeS cluster biogenesis RPIC12D_RS01915 09a08aca549508c8a443452c657ec8a2 124 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 21 124 1.4E-39 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 RPIC12D_RS14030 2af31a06b3cfed4856615bdaebbd7e12 207 Pfam PF02441 Flavoprotein 16 143 6.2E-27 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RPIC12D_RS14030 2af31a06b3cfed4856615bdaebbd7e12 207 Gene3D G3DSA:3.40.50.1950 15 202 2.6E-79 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RPIC12D_RS14030 2af31a06b3cfed4856615bdaebbd7e12 207 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 15 202 37.807 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 RPIC12D_RS14030 2af31a06b3cfed4856615bdaebbd7e12 207 SUPERFAMILY SSF52507 15 202 2.35E-63 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RPIC12D_RS14030 2af31a06b3cfed4856615bdaebbd7e12 207 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 16 200 2.2E-72 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 RPIC12D_RS14030 2af31a06b3cfed4856615bdaebbd7e12 207 PANTHER PTHR30108:SF2 15 206 2.2E-77 T 22-04-2016 RPIC12D_RS14030 2af31a06b3cfed4856615bdaebbd7e12 207 PANTHER PTHR30108 15 206 2.2E-77 T 22-04-2016 RPIC12D_RS04285 811a5784d4469a2f8c09dec5f5a8e257 374 SUPERFAMILY SSF53955 55 371 8.06E-77 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC12D_RS04285 811a5784d4469a2f8c09dec5f5a8e257 374 Gene3D G3DSA:1.10.530.10 248 372 1.5E-48 T 22-04-2016 RPIC12D_RS04285 811a5784d4469a2f8c09dec5f5a8e257 374 Gene3D G3DSA:1.10.530.10 105 160 1.5E-48 T 22-04-2016 RPIC12D_RS04285 811a5784d4469a2f8c09dec5f5a8e257 374 Pfam PF13406 Transglycosylase SLT domain 60 366 1.1E-83 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 RPIC12D_RS04285 811a5784d4469a2f8c09dec5f5a8e257 374 PANTHER PTHR30163 47 374 5.1E-97 T 22-04-2016 IPR011757 Lytic transglycosylase MltB RPIC12D_RS04285 811a5784d4469a2f8c09dec5f5a8e257 374 PANTHER PTHR30163:SF0 47 374 5.1E-97 T 22-04-2016 RPIC12D_RS04285 811a5784d4469a2f8c09dec5f5a8e257 374 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 63 368 3.5E-119 T 22-04-2016 IPR011757 Lytic transglycosylase MltB RPIC12D_RS05925 bb28a334ff2e2e8f918f9c42b2dd9151 158 Pfam PF00581 Rhodanese-like domain 31 132 1.3E-5 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS05925 bb28a334ff2e2e8f918f9c42b2dd9151 158 SMART SM00450 31 141 3.7E-4 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS05925 bb28a334ff2e2e8f918f9c42b2dd9151 158 SUPERFAMILY SSF52821 20 155 1.02E-17 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS05925 bb28a334ff2e2e8f918f9c42b2dd9151 158 Gene3D G3DSA:3.40.250.10 25 156 5.5E-36 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC12D_RS06135 f9571a5bbef66996d6050542897075bb 301 PANTHER PTHR21624 20 287 2.8E-75 T 22-04-2016 RPIC12D_RS06135 f9571a5bbef66996d6050542897075bb 301 Pfam PF04116 Fatty acid hydroxylase superfamily 94 235 4.7E-29 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 RPIC12D_RS25850 c568530a503bf887f66eba11232b3d35 158 PANTHER PTHR23408:SF1 2 158 1.5E-31 T 22-04-2016 RPIC12D_RS25850 c568530a503bf887f66eba11232b3d35 158 PANTHER PTHR23408 2 158 1.5E-31 T 22-04-2016 RPIC12D_RS25850 c568530a503bf887f66eba11232b3d35 158 Pfam PF01642 Methylmalonyl-CoA mutase 2 157 2.3E-33 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 RPIC12D_RS25850 c568530a503bf887f66eba11232b3d35 158 Gene3D G3DSA:3.20.20.240 2 158 7.0E-45 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 RPIC12D_RS25850 c568530a503bf887f66eba11232b3d35 158 SUPERFAMILY SSF51703 2 157 3.92E-34 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 RPIC12D_RS02675 3ed8668820a9144dc6ec6115682f4994 364 Pfam PF01435 Peptidase family M48 169 350 2.3E-23 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RPIC12D_RS02675 3ed8668820a9144dc6ec6115682f4994 364 Gene3D G3DSA:3.30.2010.10 164 240 1.6E-10 T 22-04-2016 RPIC12D_RS02675 3ed8668820a9144dc6ec6115682f4994 364 PANTHER PTHR22726:SF7 6 349 2.5E-47 T 22-04-2016 RPIC12D_RS02675 3ed8668820a9144dc6ec6115682f4994 364 PANTHER PTHR22726 6 349 2.5E-47 T 22-04-2016 RPIC12D_RS05875 17dc335d5e02b92e4cb595efb64026c1 319 Gene3D G3DSA:3.20.20.70 1 313 4.9E-129 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS05875 17dc335d5e02b92e4cb595efb64026c1 319 TIGRFAM TIGR00874 talAB: transaldolase 3 313 3.5E-141 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC12D_RS05875 17dc335d5e02b92e4cb595efb64026c1 319 PANTHER PTHR10683 1 313 7.1E-181 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC12D_RS05875 17dc335d5e02b92e4cb595efb64026c1 319 Pfam PF00923 Transaldolase 13 311 2.4E-100 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC12D_RS05875 17dc335d5e02b92e4cb595efb64026c1 319 PANTHER PTHR10683:SF18 1 313 7.1E-181 T 22-04-2016 RPIC12D_RS05875 17dc335d5e02b92e4cb595efb64026c1 319 Hamap MF_00492 Transaldolase [tal]. 1 316 51.02 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC12D_RS05875 17dc335d5e02b92e4cb595efb64026c1 319 SUPERFAMILY SSF51569 1 314 4.4E-115 T 22-04-2016 RPIC12D_RS05875 17dc335d5e02b92e4cb595efb64026c1 319 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC12D_RS11040 91e2cbcd2736be5ac0806e62339733a2 283 PANTHER PTHR21299 1 283 1.1E-113 T 22-04-2016 RPIC12D_RS11040 91e2cbcd2736be5ac0806e62339733a2 283 Pfam PF02569 Pantoate-beta-alanine ligase 3 281 2.4E-97 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RPIC12D_RS11040 91e2cbcd2736be5ac0806e62339733a2 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 283 37.563 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RPIC12D_RS11040 91e2cbcd2736be5ac0806e62339733a2 283 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 19 76 3.2E-8 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIC12D_RS11040 91e2cbcd2736be5ac0806e62339733a2 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 282 9.1E-91 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RPIC12D_RS11040 91e2cbcd2736be5ac0806e62339733a2 283 SUPERFAMILY SSF52374 1 283 5.0E-96 T 22-04-2016 RPIC12D_RS11040 91e2cbcd2736be5ac0806e62339733a2 283 Gene3D G3DSA:3.40.50.620 1 169 1.2E-72 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS11040 91e2cbcd2736be5ac0806e62339733a2 283 PANTHER PTHR21299:SF1 1 283 1.1E-113 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RPIC12D_RS11040 91e2cbcd2736be5ac0806e62339733a2 283 Gene3D G3DSA:3.30.1300.10 176 283 3.3E-28 T 22-04-2016 RPIC12D_RS16615 3a62ee8b00b376459e0d5def3fa36b62 298 Gene3D G3DSA:3.40.190.10 36 121 9.0E-29 T 22-04-2016 RPIC12D_RS16615 3a62ee8b00b376459e0d5def3fa36b62 298 Gene3D G3DSA:3.40.190.10 230 271 9.0E-29 T 22-04-2016 RPIC12D_RS16615 3a62ee8b00b376459e0d5def3fa36b62 298 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 267 7.7E-51 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS16615 3a62ee8b00b376459e0d5def3fa36b62 298 PANTHER PTHR30085 6 294 1.1E-90 T 22-04-2016 RPIC12D_RS16615 3a62ee8b00b376459e0d5def3fa36b62 298 Gene3D G3DSA:3.40.190.10 122 229 5.0E-22 T 22-04-2016 RPIC12D_RS16615 3a62ee8b00b376459e0d5def3fa36b62 298 SMART SM00062 38 269 9.6E-55 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS16615 3a62ee8b00b376459e0d5def3fa36b62 298 SUPERFAMILY SSF53850 9 270 1.16E-61 T 22-04-2016 RPIC12D_RS16615 3a62ee8b00b376459e0d5def3fa36b62 298 PANTHER PTHR30085:SF2 6 294 1.1E-90 T 22-04-2016 RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 Pfam PF00106 short chain dehydrogenase 5 197 1.5E-63 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 PANTHER PTHR24322:SF328 153 185 3.2E-55 T 22-04-2016 RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 PANTHER PTHR24322:SF328 8 137 3.2E-55 T 22-04-2016 RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 SUPERFAMILY SSF51735 3 245 1.27E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 Gene3D G3DSA:3.40.50.720 1 245 1.1E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 9.6E-124 T 22-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 PANTHER PTHR24322 153 185 3.2E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 PANTHER PTHR24322 8 137 3.2E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 7.0E-4 T 22-04-2016 RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.2E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.2E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.2E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.2E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.2E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.2E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.5E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.5E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS07965 8bfab8921c6d2dcfd40b21e7d8db416d 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.5E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS17135 029bc1f1a9cfb080c2dbe099fb479900 622 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 14 621 51.643 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RPIC12D_RS17135 029bc1f1a9cfb080c2dbe099fb479900 622 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 273 281 - T 22-04-2016 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RPIC12D_RS17135 029bc1f1a9cfb080c2dbe099fb479900 622 Gene3D G3DSA:3.40.449.10 15 248 1.7E-101 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RPIC12D_RS17135 029bc1f1a9cfb080c2dbe099fb479900 622 Pfam PF00821 Phosphoenolpyruvate carboxykinase 26 620 9.1E-283 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RPIC12D_RS17135 029bc1f1a9cfb080c2dbe099fb479900 622 PIRSF PIRSF001348 1 622 2.9E-289 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RPIC12D_RS17135 029bc1f1a9cfb080c2dbe099fb479900 622 SUPERFAMILY SSF53795 249 621 8.01E-154 T 22-04-2016 RPIC12D_RS17135 029bc1f1a9cfb080c2dbe099fb479900 622 SUPERFAMILY SSF68923 9 248 2.72E-102 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RPIC12D_RS17135 029bc1f1a9cfb080c2dbe099fb479900 622 Gene3D G3DSA:3.90.228.20 343 620 1.2E-99 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RPIC12D_RS17135 029bc1f1a9cfb080c2dbe099fb479900 622 Gene3D G3DSA:3.90.228.20 249 324 9.4E-29 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RPIC12D_RS17135 029bc1f1a9cfb080c2dbe099fb479900 622 PANTHER PTHR11561 21 620 0.0 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RPIC12D_RS09005 1db095623c0dbee87663e525003b5bdc 141 PANTHER PTHR10094 45 135 2.3E-15 T 22-04-2016 RPIC12D_RS09005 1db095623c0dbee87663e525003b5bdc 141 SUPERFAMILY SSF55718 18 131 5.89E-20 T 22-04-2016 IPR003033 SCP2 sterol-binding domain RPIC12D_RS09005 1db095623c0dbee87663e525003b5bdc 141 Gene3D G3DSA:3.30.1050.10 76 130 2.9E-10 T 22-04-2016 IPR003033 SCP2 sterol-binding domain RPIC12D_RS09005 1db095623c0dbee87663e525003b5bdc 141 PANTHER PTHR10094:SF16 45 135 2.3E-15 T 22-04-2016 RPIC12D_RS09005 1db095623c0dbee87663e525003b5bdc 141 Pfam PF02036 SCP-2 sterol transfer family 45 125 4.8E-11 T 22-04-2016 IPR003033 SCP2 sterol-binding domain RPIC12D_RS12080 9096713171dfe99463c3f827b2d4fd9d 216 SUPERFAMILY SSF54626 46 215 4.58E-29 T 22-04-2016 IPR016087 Chalcone isomerase GO:0016872 RPIC12D_RS12080 9096713171dfe99463c3f827b2d4fd9d 216 Pfam PF16036 Chalcone isomerase-like 48 215 5.4E-49 T 22-04-2016 IPR016087 Chalcone isomerase GO:0016872 RPIC12D_RS10320 4a72d266f7d9dc330e66fd9619efe950 290 PANTHER PTHR22572:SF14 6 288 2.0E-100 T 22-04-2016 RPIC12D_RS10320 4a72d266f7d9dc330e66fd9619efe950 290 SUPERFAMILY SSF53448 2 271 1.54E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS10320 4a72d266f7d9dc330e66fd9619efe950 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 267 6.4E-114 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 RPIC12D_RS10320 4a72d266f7d9dc330e66fd9619efe950 290 PANTHER PTHR22572 6 288 2.0E-100 T 22-04-2016 RPIC12D_RS10320 4a72d266f7d9dc330e66fd9619efe950 290 Pfam PF00483 Nucleotidyl transferase 11 268 6.8E-27 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RPIC12D_RS10320 4a72d266f7d9dc330e66fd9619efe950 290 Gene3D G3DSA:3.90.550.10 4 277 8.3E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS13730 e2812d8bdd2a5e9a20981d4d3de0e2e7 385 Gene3D G3DSA:3.40.50.2300 35 236 8.4E-58 T 22-04-2016 RPIC12D_RS13730 e2812d8bdd2a5e9a20981d4d3de0e2e7 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 267 285 1.1E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC12D_RS13730 e2812d8bdd2a5e9a20981d4d3de0e2e7 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 36 52 1.1E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC12D_RS13730 e2812d8bdd2a5e9a20981d4d3de0e2e7 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 58 74 1.1E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC12D_RS13730 e2812d8bdd2a5e9a20981d4d3de0e2e7 385 Pfam PF13458 Periplasmic binding protein 36 370 1.0E-69 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC12D_RS13730 e2812d8bdd2a5e9a20981d4d3de0e2e7 385 SUPERFAMILY SSF53822 36 384 1.49E-84 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS13730 e2812d8bdd2a5e9a20981d4d3de0e2e7 385 PANTHER PTHR30483:SF11 2 384 8.0E-77 T 22-04-2016 RPIC12D_RS13730 e2812d8bdd2a5e9a20981d4d3de0e2e7 385 PANTHER PTHR30483 2 384 8.0E-77 T 22-04-2016 RPIC12D_RS00970 2262614b7601d0370033f165ddcd4852 185 PANTHER PTHR10681 48 179 7.3E-30 T 22-04-2016 RPIC12D_RS00970 2262614b7601d0370033f165ddcd4852 185 PANTHER PTHR10681:SF107 48 179 7.3E-30 T 22-04-2016 RPIC12D_RS00970 2262614b7601d0370033f165ddcd4852 185 SUPERFAMILY SSF52833 44 183 1.24E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS00970 2262614b7601d0370033f165ddcd4852 185 Pfam PF08534 Redoxin 45 171 2.0E-26 T 22-04-2016 IPR013740 Redoxin GO:0016491 RPIC12D_RS00970 2262614b7601d0370033f165ddcd4852 185 Gene3D G3DSA:3.40.30.10 22 183 3.6E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS16310 5fd07b9277dfcbeaf7f11e4c6659d633 153 Pfam PF07007 Protein of unknown function (DUF1311) 58 148 2.4E-15 T 22-04-2016 IPR009739 Protein of unknown function DUF1311 RPIC12D_RS00895 b712a6af234d5c7b96e04f912a4272eb 655 Pfam PF06276 Ferric iron reductase FhuF-like transporter 477 638 4.7E-22 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain RPIC12D_RS00895 b712a6af234d5c7b96e04f912a4272eb 655 Pfam PF04183 IucA / IucC family 203 442 3.2E-65 T 22-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 RPIC12D_RS00895 b712a6af234d5c7b96e04f912a4272eb 655 PANTHER PTHR34384 11 655 2.1E-87 T 22-04-2016 RPIC12D_RS16150 9d83b2192a31cd7fd79bcab87426e1e1 239 Pfam PF03922 OmpW family 50 239 3.8E-37 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 RPIC12D_RS16150 9d83b2192a31cd7fd79bcab87426e1e1 239 SUPERFAMILY SSF56925 25 239 4.97E-24 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC12D_RS16150 9d83b2192a31cd7fd79bcab87426e1e1 239 PANTHER PTHR36920 6 239 1.4E-39 T 22-04-2016 RPIC12D_RS16150 9d83b2192a31cd7fd79bcab87426e1e1 239 Gene3D G3DSA:2.40.160.20 23 239 4.6E-67 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC12D_RS16150 9d83b2192a31cd7fd79bcab87426e1e1 239 PANTHER PTHR36920:SF1 6 239 1.4E-39 T 22-04-2016 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 466 1.5E-222 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 Gene3D G3DSA:3.30.499.10 318 468 1.5E-59 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PRINTS PR00415 Aconitase family signature 109 117 2.9E-46 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PRINTS PR00415 Aconitase family signature 134 149 2.9E-46 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PRINTS PR00415 Aconitase family signature 196 209 2.9E-46 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PRINTS PR00415 Aconitase family signature 120 133 2.9E-46 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PRINTS PR00415 Aconitase family signature 210 223 2.9E-46 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PRINTS PR00415 Aconitase family signature 401 414 2.9E-46 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PRINTS PR00415 Aconitase family signature 344 355 2.9E-46 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PRINTS PR00415 Aconitase family signature 83 96 2.9E-46 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PRINTS PR00415 Aconitase family signature 287 301 2.9E-46 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 SUPERFAMILY SSF53732 2 469 1.31E-162 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 ProSitePatterns PS00450 Aconitase family signature 1. 340 356 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 Gene3D G3DSA:3.40.1060.10 167 282 4.9E-39 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 468 58.148 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 Pfam PF00330 Aconitase family (aconitate hydratase) 9 459 1.1E-151 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PANTHER PTHR11670 328 467 1.3E-260 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PANTHER PTHR11670 1 308 1.3E-260 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 Gene3D G3DSA:3.30.499.10 3 158 7.7E-21 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PANTHER PTHR11670:SF38 328 467 1.3E-260 T 22-04-2016 RPIC12D_RS07240 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PANTHER PTHR11670:SF38 1 308 1.3E-260 T 22-04-2016 RPIC12D_RS09205 d7785d1c6d976bc81a60b839a2de4b95 328 SUPERFAMILY SSF56327 160 327 3.24E-56 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RPIC12D_RS09205 d7785d1c6d976bc81a60b839a2de4b95 328 PANTHER PTHR23382 2 328 3.6E-186 T 22-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RPIC12D_RS09205 d7785d1c6d976bc81a60b839a2de4b95 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 160 321 4.5E-30 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 RPIC12D_RS09205 d7785d1c6d976bc81a60b839a2de4b95 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 155 1.1E-36 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 RPIC12D_RS09205 d7785d1c6d976bc81a60b839a2de4b95 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 2 328 55.347 T 22-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RPIC12D_RS09205 d7785d1c6d976bc81a60b839a2de4b95 328 SUPERFAMILY SSF51735 4 158 1.65E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS09205 d7785d1c6d976bc81a60b839a2de4b95 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 4 322 3.8E-143 T 22-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RPIC12D_RS09205 d7785d1c6d976bc81a60b839a2de4b95 328 PIRSF PIRSF000102 2 327 9.1E-66 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RPIC12D_RS09205 d7785d1c6d976bc81a60b839a2de4b95 328 Gene3D G3DSA:3.90.110.10 158 327 6.9E-69 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RPIC12D_RS09205 d7785d1c6d976bc81a60b839a2de4b95 328 Gene3D G3DSA:3.40.50.720 4 156 6.5E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS04205 a7d32b442fe6e734d1a3e221aa81a3b2 186 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 116 169 4.3E-12 T 22-04-2016 IPR018637 Domain of unknown function DUF2059 RPIC12D_RS08715 2b323ba0f023e878e3f451f24a2548c2 516 Pfam PF01476 LysM domain 418 447 0.0029 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS08715 2b323ba0f023e878e3f451f24a2548c2 516 Gene3D G3DSA:3.10.350.10 418 454 1.1E-7 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS08715 2b323ba0f023e878e3f451f24a2548c2 516 PANTHER PTHR21666 36 442 5.5E-101 T 22-04-2016 RPIC12D_RS08715 2b323ba0f023e878e3f451f24a2548c2 516 Pfam PF01464 Transglycosylase SLT domain 111 215 1.9E-25 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RPIC12D_RS08715 2b323ba0f023e878e3f451f24a2548c2 516 PANTHER PTHR21666:SF206 36 442 5.5E-101 T 22-04-2016 RPIC12D_RS08715 2b323ba0f023e878e3f451f24a2548c2 516 Gene3D G3DSA:1.10.530.10 101 262 5.5E-47 T 22-04-2016 RPIC12D_RS08715 2b323ba0f023e878e3f451f24a2548c2 516 Gene3D G3DSA:3.10.350.10 337 378 4.4E-4 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS08715 2b323ba0f023e878e3f451f24a2548c2 516 SMART SM00257 334 378 0.91 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS08715 2b323ba0f023e878e3f451f24a2548c2 516 SMART SM00257 411 456 0.23 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS08715 2b323ba0f023e878e3f451f24a2548c2 516 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 125 153 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 RPIC12D_RS08715 2b323ba0f023e878e3f451f24a2548c2 516 SUPERFAMILY SSF53955 104 264 4.15E-43 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC12D_RS08715 2b323ba0f023e878e3f451f24a2548c2 516 SUPERFAMILY SSF54106 414 455 5.1E-5 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS02225 7ad7d61b17cb2a1d673e1195ae0fe2f5 512 Pfam PF13450 NAD(P)-binding Rossmann-like domain 25 78 2.1E-7 T 22-04-2016 RPIC12D_RS02225 7ad7d61b17cb2a1d673e1195ae0fe2f5 512 Pfam PF00743 Flavin-binding monooxygenase-like 95 239 2.8E-14 T 22-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 RPIC12D_RS02225 7ad7d61b17cb2a1d673e1195ae0fe2f5 512 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 197 222 3.1E-5 T 22-04-2016 RPIC12D_RS02225 7ad7d61b17cb2a1d673e1195ae0fe2f5 512 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 22 44 3.1E-5 T 22-04-2016 RPIC12D_RS02225 7ad7d61b17cb2a1d673e1195ae0fe2f5 512 SUPERFAMILY SSF51905 18 399 4.98E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS02225 7ad7d61b17cb2a1d673e1195ae0fe2f5 512 PANTHER PTHR23023 18 487 1.2E-218 T 22-04-2016 RPIC12D_RS02225 7ad7d61b17cb2a1d673e1195ae0fe2f5 512 PANTHER PTHR23023:SF30 18 487 1.2E-218 T 22-04-2016 RPIC12D_RS02225 7ad7d61b17cb2a1d673e1195ae0fe2f5 512 Gene3D G3DSA:3.50.50.60 341 481 4.7E-7 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS02225 7ad7d61b17cb2a1d673e1195ae0fe2f5 512 Gene3D G3DSA:3.50.50.60 12 234 1.1E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10150 92624f880a1c214be3680e9802324cf5 311 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 19 311 42.954 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 RPIC12D_RS10150 92624f880a1c214be3680e9802324cf5 311 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 19 287 1.4E-115 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 RPIC12D_RS10150 92624f880a1c214be3680e9802324cf5 311 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 20 268 4.7E-44 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC12D_RS10150 92624f880a1c214be3680e9802324cf5 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 34 6.3E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC12D_RS10150 92624f880a1c214be3680e9802324cf5 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 51 64 6.3E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC12D_RS10150 92624f880a1c214be3680e9802324cf5 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 215 223 6.3E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC12D_RS10150 92624f880a1c214be3680e9802324cf5 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 47 6.3E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC12D_RS10150 92624f880a1c214be3680e9802324cf5 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 199 209 6.3E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC12D_RS10150 92624f880a1c214be3680e9802324cf5 311 PANTHER PTHR11451:SF35 12 261 5.3E-84 T 22-04-2016 RPIC12D_RS10150 92624f880a1c214be3680e9802324cf5 311 Gene3D G3DSA:3.40.50.620 19 83 1.5E-40 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS10150 92624f880a1c214be3680e9802324cf5 311 Gene3D G3DSA:3.40.50.620 201 250 1.5E-40 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS10150 92624f880a1c214be3680e9802324cf5 311 SUPERFAMILY SSF52374 18 287 6.97E-84 T 22-04-2016 RPIC12D_RS10150 92624f880a1c214be3680e9802324cf5 311 PANTHER PTHR11451 12 261 5.3E-84 T 22-04-2016 RPIC12D_RS10150 92624f880a1c214be3680e9802324cf5 311 Gene3D G3DSA:3.90.800.10 84 199 1.3E-15 T 22-04-2016 RPIC12D_RS11820 e044eddd2248f62260cece4d7b90668d 136 PANTHER PTHR33452 1 133 2.9E-42 T 22-04-2016 RPIC12D_RS11820 e044eddd2248f62260cece4d7b90668d 136 Pfam PF07681 DoxX 12 93 5.2E-19 T 22-04-2016 IPR032808 DoxX family RPIC12D_RS11820 e044eddd2248f62260cece4d7b90668d 136 PANTHER PTHR33452:SF6 1 133 2.9E-42 T 22-04-2016 RPIC12D_RS13260 e190f1998fe64c4aba9187a3270a1151 197 PANTHER PTHR33508:SF4 1 193 1.2E-71 T 22-04-2016 RPIC12D_RS13260 e190f1998fe64c4aba9187a3270a1151 197 Pfam PF01914 MarC family integral membrane protein 5 192 1.0E-51 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RPIC12D_RS13260 e190f1998fe64c4aba9187a3270a1151 197 PANTHER PTHR33508 1 193 1.2E-71 T 22-04-2016 RPIC12D_RS13260 e190f1998fe64c4aba9187a3270a1151 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 190 1.4E-33 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RPIC12D_RS14875 af38e70ee67f95d9b57e559ee22ab371 126 PANTHER PTHR33910 1 126 2.4E-17 T 22-04-2016 RPIC12D_RS14875 af38e70ee67f95d9b57e559ee22ab371 126 Gene3D G3DSA:1.20.5.1030 64 121 1.2E-23 T 22-04-2016 RPIC12D_RS14875 af38e70ee67f95d9b57e559ee22ab371 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 67 122 9.2E-19 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RPIC12D_RS14875 af38e70ee67f95d9b57e559ee22ab371 126 PANTHER PTHR33910:SF1 1 126 2.4E-17 T 22-04-2016 RPIC12D_RS14875 af38e70ee67f95d9b57e559ee22ab371 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 65 120 11.443 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE RPIC12D_RS14875 af38e70ee67f95d9b57e559ee22ab371 126 PRINTS PR01650 Bacterial translocase SecE signature 64 84 7.9E-13 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RPIC12D_RS14875 af38e70ee67f95d9b57e559ee22ab371 126 PRINTS PR01650 Bacterial translocase SecE signature 43 64 7.9E-13 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RPIC12D_RS14875 af38e70ee67f95d9b57e559ee22ab371 126 PRINTS PR01650 Bacterial translocase SecE signature 88 108 7.9E-13 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RPIC12D_RS14875 af38e70ee67f95d9b57e559ee22ab371 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 69 119 1.5E-19 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 RPIC12D_RS11965 9ffdc40bfae649cffe4ced1463663f2d 266 PIRSF PIRSF039085 16 264 1.3E-112 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RPIC12D_RS11965 9ffdc40bfae649cffe4ced1463663f2d 266 PANTHER PTHR24220:SF327 21 265 5.2E-129 T 22-04-2016 RPIC12D_RS11965 9ffdc40bfae649cffe4ced1463663f2d 266 PANTHER PTHR24220 21 265 5.2E-129 T 22-04-2016 RPIC12D_RS11965 9ffdc40bfae649cffe4ced1463663f2d 266 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS11965 9ffdc40bfae649cffe4ced1463663f2d 266 SUPERFAMILY SSF52540 19 258 4.38E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11965 9ffdc40bfae649cffe4ced1463663f2d 266 SMART SM00382 44 236 2.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS11965 9ffdc40bfae649cffe4ced1463663f2d 266 Pfam PF00005 ABC transporter 35 188 6.0E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS11965 9ffdc40bfae649cffe4ced1463663f2d 266 Gene3D G3DSA:3.40.50.300 18 261 8.3E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13810 7bfd4f462ed3ff169a120af2c27c6c7a 243 SUPERFAMILY SSF56784 10 228 2.94E-57 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS13810 7bfd4f462ed3ff169a120af2c27c6c7a 243 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 115 193 3.8E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS13810 7bfd4f462ed3ff169a120af2c27c6c7a 243 PANTHER PTHR18901 10 221 1.6E-49 T 22-04-2016 RPIC12D_RS13810 7bfd4f462ed3ff169a120af2c27c6c7a 243 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 199 4.7E-35 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS13810 7bfd4f462ed3ff169a120af2c27c6c7a 243 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 188 201 3.1E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS13810 7bfd4f462ed3ff169a120af2c27c6c7a 243 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 3.1E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS13810 7bfd4f462ed3ff169a120af2c27c6c7a 243 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 3.1E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS13810 7bfd4f462ed3ff169a120af2c27c6c7a 243 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 159 3.1E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS13810 7bfd4f462ed3ff169a120af2c27c6c7a 243 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 14 224 9.4E-62 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 RPIC12D_RS13810 7bfd4f462ed3ff169a120af2c27c6c7a 243 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 87 198 3.7E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS13810 7bfd4f462ed3ff169a120af2c27c6c7a 243 Gene3D G3DSA:1.10.150.240 30 92 5.0E-9 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RPIC12D_RS13810 7bfd4f462ed3ff169a120af2c27c6c7a 243 Gene3D G3DSA:3.40.50.1000 10 29 6.5E-44 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS13810 7bfd4f462ed3ff169a120af2c27c6c7a 243 Gene3D G3DSA:3.40.50.1000 97 228 6.5E-44 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS20050 b777a78724790f03cbde27f810e7d496 258 SUPERFAMILY SSF47226 97 208 2.16E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS20050 b777a78724790f03cbde27f810e7d496 258 Gene3D G3DSA:1.20.120.160 124 209 4.9E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS09095 918bd9ff4b86522827669e1b80ba5266 511 PANTHER PTHR11907:SF0 1 479 5.3E-246 T 22-04-2016 RPIC12D_RS09095 918bd9ff4b86522827669e1b80ba5266 511 SUPERFAMILY SSF56235 2 259 1.63E-67 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS09095 918bd9ff4b86522827669e1b80ba5266 511 Pfam PF13522 Glutamine amidotransferase domain 65 196 1.3E-15 T 22-04-2016 RPIC12D_RS09095 918bd9ff4b86522827669e1b80ba5266 511 Gene3D G3DSA:3.60.20.10 2 259 7.6E-58 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS09095 918bd9ff4b86522827669e1b80ba5266 511 Pfam PF00156 Phosphoribosyl transferase domain 281 394 1.1E-11 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIC12D_RS09095 918bd9ff4b86522827669e1b80ba5266 511 PIRSF PIRSF000485 1 482 6.4E-156 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 RPIC12D_RS09095 918bd9ff4b86522827669e1b80ba5266 511 SUPERFAMILY SSF53271 252 484 4.59E-72 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS09095 918bd9ff4b86522827669e1b80ba5266 511 PANTHER PTHR11907 1 479 5.3E-246 T 22-04-2016 RPIC12D_RS09095 918bd9ff4b86522827669e1b80ba5266 511 Gene3D G3DSA:3.40.50.2020 273 444 4.0E-47 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS09095 918bd9ff4b86522827669e1b80ba5266 511 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 467 44.466 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 RPIC12D_RS09095 918bd9ff4b86522827669e1b80ba5266 511 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 465 1.4E-155 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 RPIC12D_RS08365 a90aab6303c1186e4b16047abb43e529 274 PANTHER PTHR10992 3 268 1.0E-44 T 22-04-2016 RPIC12D_RS08365 a90aab6303c1186e4b16047abb43e529 274 SUPERFAMILY SSF53474 4 265 1.05E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS08365 a90aab6303c1186e4b16047abb43e529 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 7.5E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS08365 a90aab6303c1186e4b16047abb43e529 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 7.5E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS08365 a90aab6303c1186e4b16047abb43e529 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 7.5E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS08365 a90aab6303c1186e4b16047abb43e529 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 7.5E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS08365 a90aab6303c1186e4b16047abb43e529 274 Pfam PF00561 alpha/beta hydrolase fold 25 250 1.9E-22 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS08365 a90aab6303c1186e4b16047abb43e529 274 Gene3D G3DSA:3.40.50.1820 3 266 9.4E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS06175 bc56e5d438e5b8248192c5b1c8b7aca3 312 Gene3D G3DSA:3.90.1680.10 125 292 1.2E-24 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC12D_RS06175 bc56e5d438e5b8248192c5b1c8b7aca3 312 Pfam PF02586 SOS response associated peptidase (SRAP) 127 297 5.6E-20 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC12D_RS06175 bc56e5d438e5b8248192c5b1c8b7aca3 312 SUPERFAMILY SSF143081 127 304 1.22E-34 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 Gene3D G3DSA:3.50.50.60 120 270 5.1E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 Gene3D G3DSA:2.40.50.100 1 93 4.0E-20 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 121 578 1.6E-141 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 122 141 7.4E-39 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 385 401 7.4E-39 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 315 7.4E-39 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 277 7.4E-39 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 414 436 7.4E-39 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 468 576 4.9E-33 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PANTHER PTHR22912 257 580 4.7E-255 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PANTHER PTHR22912 106 235 4.7E-255 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 Pfam PF00364 Biotin-requiring enzyme 5 75 5.2E-19 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 Gene3D G3DSA:3.30.390.30 463 579 1.7E-45 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PANTHER PTHR22912:SF160 257 580 4.7E-255 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PANTHER PTHR22912:SF160 106 235 4.7E-255 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 271 3.0E-68 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 121 143 3.0E-68 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 551 571 3.0E-68 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 464 485 3.0E-68 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 322 3.0E-68 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 436 3.0E-68 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 386 400 3.0E-68 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 529 544 3.0E-68 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 169 3.0E-68 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 SUPERFAMILY SSF51230 2 95 2.22E-22 T 22-04-2016 IPR011053 Single hybrid motif RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 SUPERFAMILY SSF55424 464 586 1.6E-38 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 122 449 3.3E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 155 165 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 PIRSF PIRSF000350 17 587 1.1E-79 T 22-04-2016 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 Gene3D G3DSA:3.50.50.60 276 387 2.6E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 SUPERFAMILY SSF51905 118 458 5.56E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS08125 4cbfbd2ac7f942398977279a2a57cae7 593 Gene3D G3DSA:3.50.50.60 388 459 2.5E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS01955 e093e6706be9ebaea2a3f41877ed57a8 379 SUPERFAMILY SSF51695 43 373 6.28E-77 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RPIC12D_RS01955 e093e6706be9ebaea2a3f41877ed57a8 379 PANTHER PTHR23344:SF7 44 372 9.6E-108 T 22-04-2016 RPIC12D_RS01955 e093e6706be9ebaea2a3f41877ed57a8 379 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 47 368 1.9E-49 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RPIC12D_RS01955 e093e6706be9ebaea2a3f41877ed57a8 379 PANTHER PTHR23344 44 372 9.6E-108 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 RPIC12D_RS01955 e093e6706be9ebaea2a3f41877ed57a8 379 Gene3D G3DSA:3.20.20.190 43 374 2.8E-92 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RPIC12D_RS11380 86bc6faa8cbb9265046ae8bfb0a53d6b 249 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 135 244 4.5E-16 T 22-04-2016 IPR006528 Phage head morphogenesis domain RPIC12D_RS11380 86bc6faa8cbb9265046ae8bfb0a53d6b 249 Pfam PF04233 Phage Mu protein F like protein 135 240 3.6E-17 T 22-04-2016 IPR006528 Phage head morphogenesis domain RPIC12D_RS13255 6e385908b265cd2ca604b82a0eed4b8a 182 SUPERFAMILY SSF53271 16 180 2.49E-44 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS13255 6e385908b265cd2ca604b82a0eed4b8a 182 PANTHER PTHR22573:SF56 15 180 3.1E-38 T 22-04-2016 RPIC12D_RS13255 6e385908b265cd2ca604b82a0eed4b8a 182 Pfam PF00156 Phosphoribosyl transferase domain 15 165 2.6E-18 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIC12D_RS13255 6e385908b265cd2ca604b82a0eed4b8a 182 PANTHER PTHR22573 15 180 3.1E-38 T 22-04-2016 RPIC12D_RS13255 6e385908b265cd2ca604b82a0eed4b8a 182 Gene3D G3DSA:3.40.50.2020 14 181 2.0E-50 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS25770 6682f17bdb7a0f092de4463bc2f3bde7 110 Gene3D G3DSA:3.40.640.10 1 110 1.7E-39 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS25770 6682f17bdb7a0f092de4463bc2f3bde7 110 Pfam PF00155 Aminotransferase class I and II 3 107 5.3E-12 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC12D_RS25770 6682f17bdb7a0f092de4463bc2f3bde7 110 PANTHER PTHR11751 1 107 2.4E-31 T 22-04-2016 RPIC12D_RS25770 6682f17bdb7a0f092de4463bc2f3bde7 110 SUPERFAMILY SSF53383 1 110 1.84E-32 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS25770 6682f17bdb7a0f092de4463bc2f3bde7 110 PANTHER PTHR11751:SF294 1 107 2.4E-31 T 22-04-2016 RPIC12D_RS05285 39e2a3ca5f684e0e4e859f412b501cc5 564 SUPERFAMILY SSF64182 48 461 6.28E-118 T 22-04-2016 RPIC12D_RS05285 39e2a3ca5f684e0e4e859f412b501cc5 564 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 562 6.8E-147 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 RPIC12D_RS05285 39e2a3ca5f684e0e4e859f412b501cc5 564 Pfam PF02272 DHHA1 domain 379 447 2.0E-15 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 RPIC12D_RS05285 39e2a3ca5f684e0e4e859f412b501cc5 564 Pfam PF01368 DHH family 75 184 8.3E-10 T 22-04-2016 IPR001667 DDH domain RPIC12D_RS05285 39e2a3ca5f684e0e4e859f412b501cc5 564 PANTHER PTHR30255 1 564 9.6E-201 T 22-04-2016 RPIC12D_RS05285 39e2a3ca5f684e0e4e859f412b501cc5 564 PANTHER PTHR30255:SF2 1 564 9.6E-201 T 22-04-2016 RPIC12D_RS00385 a3dcb862b12bef0706bcc06bfabd18c6 117 Gene3D G3DSA:3.10.180.10 1 115 9.7E-33 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS00385 a3dcb862b12bef0706bcc06bfabd18c6 117 SUPERFAMILY SSF54593 5 114 1.75E-26 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS00385 a3dcb862b12bef0706bcc06bfabd18c6 117 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 112 7.0E-8 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC12D_RS00385 a3dcb862b12bef0706bcc06bfabd18c6 117 PANTHER PTHR34109 37 117 5.7E-12 T 22-04-2016 RPIC12D_RS16910 03427fa1e45ba575db26c830f5965236 488 PANTHER PTHR11659 2 488 8.8E-253 T 22-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 RPIC12D_RS16910 03427fa1e45ba575db26c830f5965236 488 Gene3D G3DSA:1.10.10.410 423 485 7.8E-7 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RPIC12D_RS16910 03427fa1e45ba575db26c830f5965236 488 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 485 7.6E-166 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RPIC12D_RS16910 03427fa1e45ba575db26c830f5965236 488 SUPERFAMILY SSF55931 4 301 3.34E-118 T 22-04-2016 RPIC12D_RS16910 03427fa1e45ba575db26c830f5965236 488 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 149 163 - T 22-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 RPIC12D_RS16910 03427fa1e45ba575db26c830f5965236 488 SMART SM00845 333 485 2.9E-81 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 RPIC12D_RS16910 03427fa1e45ba575db26c830f5965236 488 Pfam PF02934 GatB/GatE catalytic domain 5 294 5.1E-111 T 22-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 RPIC12D_RS16910 03427fa1e45ba575db26c830f5965236 488 PANTHER PTHR11659:SF0 2 488 8.8E-253 T 22-04-2016 RPIC12D_RS16910 03427fa1e45ba575db26c830f5965236 488 SUPERFAMILY SSF89095 302 408 5.36E-30 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 RPIC12D_RS16910 03427fa1e45ba575db26c830f5965236 488 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 486 38.496 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RPIC12D_RS16910 03427fa1e45ba575db26c830f5965236 488 Pfam PF02637 GatB domain 334 485 1.8E-52 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 RPIC12D_RS04645 86a4f55e9d7e6187d87ad8bf3302976d 122 PANTHER PTHR33751 16 114 2.4E-16 T 22-04-2016 RPIC12D_RS04645 86a4f55e9d7e6187d87ad8bf3302976d 122 PANTHER PTHR33751:SF3 16 114 2.4E-16 T 22-04-2016 RPIC12D_RS04645 86a4f55e9d7e6187d87ad8bf3302976d 122 Gene3D G3DSA:1.10.760.10 19 112 6.2E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS04645 86a4f55e9d7e6187d87ad8bf3302976d 122 SUPERFAMILY SSF46626 4 112 6.65E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS13545 a50f99a73c9bfca61f8e072af3062a8a 204 Pfam PF01121 Dephospho-CoA kinase 3 188 2.8E-57 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RPIC12D_RS13545 a50f99a73c9bfca61f8e072af3062a8a 204 PANTHER PTHR10695 1 204 9.6E-65 T 22-04-2016 RPIC12D_RS13545 a50f99a73c9bfca61f8e072af3062a8a 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 195 1.8E-49 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RPIC12D_RS13545 a50f99a73c9bfca61f8e072af3062a8a 204 Gene3D G3DSA:3.40.50.300 1 197 1.3E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13545 a50f99a73c9bfca61f8e072af3062a8a 204 SUPERFAMILY SSF52540 1 197 2.42E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13545 a50f99a73c9bfca61f8e072af3062a8a 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 204 27.765 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RPIC12D_RS03160 091173b9468d3399acd28b3ff0a0bcda 72 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 14 64 2.3E-25 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) RPIC12D_RS03160 091173b9468d3399acd28b3ff0a0bcda 72 PANTHER PTHR36154 8 71 1.4E-13 T 22-04-2016 RPIC12D_RS12915 475b074ca9b5c7f20aba62c3b80cfe68 671 Gene3D G3DSA:3.40.50.970 5 328 1.8E-134 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS12915 475b074ca9b5c7f20aba62c3b80cfe68 671 Gene3D G3DSA:3.40.50.970 336 538 2.0E-79 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS12915 475b074ca9b5c7f20aba62c3b80cfe68 671 PANTHER PTHR11624:SF1 350 671 0.0 T 22-04-2016 RPIC12D_RS12915 475b074ca9b5c7f20aba62c3b80cfe68 671 PANTHER PTHR11624:SF1 10 319 0.0 T 22-04-2016 RPIC12D_RS12915 475b074ca9b5c7f20aba62c3b80cfe68 671 TIGRFAM TIGR00232 tktlase_bact: transketolase 16 670 2.1E-294 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 RPIC12D_RS12915 475b074ca9b5c7f20aba62c3b80cfe68 671 Gene3D G3DSA:3.40.50.920 547 668 7.9E-47 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RPIC12D_RS12915 475b074ca9b5c7f20aba62c3b80cfe68 671 SUPERFAMILY SSF52922 542 670 1.31E-44 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RPIC12D_RS12915 475b074ca9b5c7f20aba62c3b80cfe68 671 ProSitePatterns PS00801 Transketolase signature 1. 22 42 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RPIC12D_RS12915 475b074ca9b5c7f20aba62c3b80cfe68 671 Pfam PF02780 Transketolase, C-terminal domain 558 662 3.8E-17 T 22-04-2016 IPR033248 Transketolase, C-terminal domain RPIC12D_RS12915 475b074ca9b5c7f20aba62c3b80cfe68 671 SUPERFAMILY SSF52518 10 328 1.27E-122 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS12915 475b074ca9b5c7f20aba62c3b80cfe68 671 SUPERFAMILY SSF52518 351 534 1.96E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS12915 475b074ca9b5c7f20aba62c3b80cfe68 671 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 15 343 1.8E-158 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RPIC12D_RS12915 475b074ca9b5c7f20aba62c3b80cfe68 671 PANTHER PTHR11624 350 671 0.0 T 22-04-2016 IPR033247 Transketolase family RPIC12D_RS12915 475b074ca9b5c7f20aba62c3b80cfe68 671 PANTHER PTHR11624 10 319 0.0 T 22-04-2016 IPR033247 Transketolase family RPIC12D_RS12915 475b074ca9b5c7f20aba62c3b80cfe68 671 SMART SM00861 364 534 1.9E-69 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RPIC12D_RS12915 475b074ca9b5c7f20aba62c3b80cfe68 671 Pfam PF02779 Transketolase, pyrimidine binding domain 363 533 9.1E-46 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RPIC12D_RS17040 0e6d85f00f71f81223f7d5f1986a75d9 504 PANTHER PTHR11751:SF10 119 504 2.0E-124 T 22-04-2016 RPIC12D_RS17040 0e6d85f00f71f81223f7d5f1986a75d9 504 Gene3D G3DSA:3.40.640.10 168 390 6.4E-56 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS17040 0e6d85f00f71f81223f7d5f1986a75d9 504 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 83 6.1E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS17040 0e6d85f00f71f81223f7d5f1986a75d9 504 SUPERFAMILY SSF53383 140 501 1.22E-86 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS17040 0e6d85f00f71f81223f7d5f1986a75d9 504 PANTHER PTHR11751 119 504 2.0E-124 T 22-04-2016 RPIC12D_RS17040 0e6d85f00f71f81223f7d5f1986a75d9 504 SUPERFAMILY SSF46785 18 87 8.98E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS17040 0e6d85f00f71f81223f7d5f1986a75d9 504 Gene3D G3DSA:1.10.10.10 18 84 7.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS17040 0e6d85f00f71f81223f7d5f1986a75d9 504 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 2.9E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS17040 0e6d85f00f71f81223f7d5f1986a75d9 504 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 2.9E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS17040 0e6d85f00f71f81223f7d5f1986a75d9 504 SMART SM00345 24 83 2.0E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC12D_RS17040 0e6d85f00f71f81223f7d5f1986a75d9 504 Pfam PF00155 Aminotransferase class I and II 171 449 8.5E-21 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC12D_RS16415 36cd2a64c44e526a2210725e71e72bbe 246 Pfam PF00230 Major intrinsic protein 6 121 2.7E-17 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS16415 36cd2a64c44e526a2210725e71e72bbe 246 ProSitePatterns PS00221 MIP family signature. 69 77 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS16415 36cd2a64c44e526a2210725e71e72bbe 246 Gene3D G3DSA:1.20.1080.10 4 226 2.0E-29 T 22-04-2016 IPR023271 Aquaporin-like RPIC12D_RS16415 36cd2a64c44e526a2210725e71e72bbe 246 SUPERFAMILY SSF81338 4 221 9.29E-34 T 22-04-2016 IPR023271 Aquaporin-like RPIC12D_RS16415 36cd2a64c44e526a2210725e71e72bbe 246 PANTHER PTHR19139 5 145 9.4E-18 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS16415 36cd2a64c44e526a2210725e71e72bbe 246 PRINTS PR00783 Major intrinsic protein family signature 198 218 2.1E-20 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS16415 36cd2a64c44e526a2210725e71e72bbe 246 PRINTS PR00783 Major intrinsic protein family signature 88 107 2.1E-20 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS16415 36cd2a64c44e526a2210725e71e72bbe 246 PRINTS PR00783 Major intrinsic protein family signature 131 149 2.1E-20 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS16415 36cd2a64c44e526a2210725e71e72bbe 246 PRINTS PR00783 Major intrinsic protein family signature 9 28 2.1E-20 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS16415 36cd2a64c44e526a2210725e71e72bbe 246 PRINTS PR00783 Major intrinsic protein family signature 51 75 2.1E-20 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS04920 017d2ef185e56e8942e17f78e9df43ec 410 Gene3D G3DSA:3.40.47.10 3 258 2.7E-83 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS04920 017d2ef185e56e8942e17f78e9df43ec 410 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 408 3.9E-197 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 RPIC12D_RS04920 017d2ef185e56e8942e17f78e9df43ec 410 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 7.8E-61 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RPIC12D_RS04920 017d2ef185e56e8942e17f78e9df43ec 410 SMART SM00825 Beta-ketoacyl synthase 6 410 4.2E-16 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RPIC12D_RS04920 017d2ef185e56e8942e17f78e9df43ec 410 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site RPIC12D_RS04920 017d2ef185e56e8942e17f78e9df43ec 410 SUPERFAMILY SSF53901 4 252 2.63E-81 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS04920 017d2ef185e56e8942e17f78e9df43ec 410 Gene3D G3DSA:3.40.47.10 263 409 3.9E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS04920 017d2ef185e56e8942e17f78e9df43ec 410 PANTHER PTHR11712 3 410 2.3E-211 T 22-04-2016 RPIC12D_RS04920 017d2ef185e56e8942e17f78e9df43ec 410 SUPERFAMILY SSF53901 214 409 5.76E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS04920 017d2ef185e56e8942e17f78e9df43ec 410 PIRSF PIRSF000447 1 410 4.0E-184 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 RPIC12D_RS04920 017d2ef185e56e8942e17f78e9df43ec 410 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 367 1.0E-35 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RPIC12D_RS16445 4a998b0dd05cdca5120ddd16460fad8e 349 PANTHER PTHR30024:SF8 3 282 1.3E-32 T 22-04-2016 RPIC12D_RS16445 4a998b0dd05cdca5120ddd16460fad8e 349 SUPERFAMILY SSF53850 38 281 4.35E-32 T 22-04-2016 RPIC12D_RS16445 4a998b0dd05cdca5120ddd16460fad8e 349 Gene3D G3DSA:3.40.190.10 134 258 5.0E-15 T 22-04-2016 RPIC12D_RS16445 4a998b0dd05cdca5120ddd16460fad8e 349 Pfam PF09084 NMT1/THI5 like 56 269 1.6E-22 T 22-04-2016 IPR015168 SsuA/THI5-like RPIC12D_RS16445 4a998b0dd05cdca5120ddd16460fad8e 349 PANTHER PTHR30024 3 282 1.3E-32 T 22-04-2016 RPIC12D_RS06850 e126247fda97915f7c99e238bb93f55b 309 Pfam PF16200 C-terminal region of band_7 244 305 1.8E-26 T 22-04-2016 IPR032435 Band 7, C-terminal extension RPIC12D_RS06850 e126247fda97915f7c99e238bb93f55b 309 SMART SM00244 21 179 2.9E-58 T 22-04-2016 IPR001107 Band 7 domain RPIC12D_RS06850 e126247fda97915f7c99e238bb93f55b 309 PANTHER PTHR10264:SF27 9 303 1.5E-137 T 22-04-2016 RPIC12D_RS06850 e126247fda97915f7c99e238bb93f55b 309 Pfam PF01145 SPFH domain / Band 7 family 25 195 5.7E-30 T 22-04-2016 IPR001107 Band 7 domain RPIC12D_RS06850 e126247fda97915f7c99e238bb93f55b 309 PRINTS PR00721 Stomatin signature 76 97 4.5E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC12D_RS06850 e126247fda97915f7c99e238bb93f55b 309 PRINTS PR00721 Stomatin signature 174 195 4.5E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC12D_RS06850 e126247fda97915f7c99e238bb93f55b 309 PRINTS PR00721 Stomatin signature 28 50 4.5E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC12D_RS06850 e126247fda97915f7c99e238bb93f55b 309 PRINTS PR00721 Stomatin signature 155 173 4.5E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC12D_RS06850 e126247fda97915f7c99e238bb93f55b 309 PRINTS PR00721 Stomatin signature 131 154 4.5E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC12D_RS06850 e126247fda97915f7c99e238bb93f55b 309 PRINTS PR00721 Stomatin signature 111 128 4.5E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC12D_RS06850 e126247fda97915f7c99e238bb93f55b 309 PANTHER PTHR10264 9 303 1.5E-137 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC12D_RS06850 e126247fda97915f7c99e238bb93f55b 309 SUPERFAMILY SSF117892 52 186 1.31E-39 T 22-04-2016 IPR001107 Band 7 domain RPIC12D_RS12855 c9fdbf4f229d715400ed7928ecccf393 339 Pfam PF00072 Response regulator receiver domain 15 125 5.2E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS12855 c9fdbf4f229d715400ed7928ecccf393 339 PANTHER PTHR26402 13 155 1.1E-16 T 22-04-2016 RPIC12D_RS12855 c9fdbf4f229d715400ed7928ecccf393 339 PANTHER PTHR26402:SF515 13 155 1.1E-16 T 22-04-2016 RPIC12D_RS12855 c9fdbf4f229d715400ed7928ecccf393 339 Gene3D G3DSA:3.40.50.2300 13 142 4.6E-22 T 22-04-2016 RPIC12D_RS12855 c9fdbf4f229d715400ed7928ecccf393 339 SMART SM00448 13 126 7.5E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS12855 c9fdbf4f229d715400ed7928ecccf393 339 SUPERFAMILY SSF52172 11 153 4.84E-24 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS04330 0ebfebfa226d564b1d0cf5ef1a62cf10 165 Gene3D G3DSA:1.10.10.10 12 63 8.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS04330 0ebfebfa226d564b1d0cf5ef1a62cf10 165 SMART SM00344 11 120 1.4E-46 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RPIC12D_RS04330 0ebfebfa226d564b1d0cf5ef1a62cf10 165 Pfam PF01037 Lrp/AsnC ligand binding domain 77 151 3.6E-20 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC12D_RS04330 0ebfebfa226d564b1d0cf5ef1a62cf10 165 ProSitePatterns PS00519 AsnC-type HTH domain signature. 29 55 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RPIC12D_RS04330 0ebfebfa226d564b1d0cf5ef1a62cf10 165 PANTHER PTHR30154:SF0 3 163 8.8E-80 T 22-04-2016 RPIC12D_RS04330 0ebfebfa226d564b1d0cf5ef1a62cf10 165 Gene3D G3DSA:3.30.70.920 64 159 1.6E-31 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC12D_RS04330 0ebfebfa226d564b1d0cf5ef1a62cf10 165 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 57 5.3E-19 T 22-04-2016 RPIC12D_RS04330 0ebfebfa226d564b1d0cf5ef1a62cf10 165 SUPERFAMILY SSF54909 73 158 1.47E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC12D_RS04330 0ebfebfa226d564b1d0cf5ef1a62cf10 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 6.4E-19 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS04330 0ebfebfa226d564b1d0cf5ef1a62cf10 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 6.4E-19 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS04330 0ebfebfa226d564b1d0cf5ef1a62cf10 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 6.4E-19 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC12D_RS04330 0ebfebfa226d564b1d0cf5ef1a62cf10 165 SUPERFAMILY SSF46785 10 70 5.66E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS04330 0ebfebfa226d564b1d0cf5ef1a62cf10 165 PANTHER PTHR30154 3 163 8.8E-80 T 22-04-2016 RPIC12D_RS11495 da59eb574074243236678e3b8fff7d21 277 SUPERFAMILY SSF141571 33 174 6.38E-50 T 22-04-2016 RPIC12D_RS11495 da59eb574074243236678e3b8fff7d21 277 PANTHER PTHR14136 8 174 6.7E-46 T 22-04-2016 RPIC12D_RS11495 da59eb574074243236678e3b8fff7d21 277 PANTHER PTHR14136:SF0 8 174 6.7E-46 T 22-04-2016 RPIC12D_RS11495 da59eb574074243236678e3b8fff7d21 277 Pfam PF00805 Pentapeptide repeats (8 copies) 33 63 4.1E-10 T 22-04-2016 IPR001646 Pentapeptide repeat RPIC12D_RS11495 da59eb574074243236678e3b8fff7d21 277 Pfam PF00805 Pentapeptide repeats (8 copies) 94 133 9.2E-16 T 22-04-2016 IPR001646 Pentapeptide repeat RPIC12D_RS11495 da59eb574074243236678e3b8fff7d21 277 Pfam PF00805 Pentapeptide repeats (8 copies) 134 173 9.8E-14 T 22-04-2016 IPR001646 Pentapeptide repeat RPIC12D_RS15845 392dae4a31ee4269324a01f74f854c58 126 Pfam PF01597 Glycine cleavage H-protein 8 124 2.0E-42 T 22-04-2016 IPR002930 Glycine cleavage system H-protein RPIC12D_RS15845 392dae4a31ee4269324a01f74f854c58 126 PANTHER PTHR11715 1 123 4.2E-55 T 22-04-2016 IPR002930 Glycine cleavage system H-protein RPIC12D_RS15845 392dae4a31ee4269324a01f74f854c58 126 SUPERFAMILY SSF51230 4 125 2.88E-38 T 22-04-2016 IPR011053 Single hybrid motif RPIC12D_RS15845 392dae4a31ee4269324a01f74f854c58 126 Gene3D G3DSA:2.40.50.100 7 125 5.0E-43 T 22-04-2016 RPIC12D_RS15845 392dae4a31ee4269324a01f74f854c58 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 124 1.5E-44 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 RPIC12D_RS15845 392dae4a31ee4269324a01f74f854c58 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 28.161 T 22-04-2016 IPR002930 Glycine cleavage system H-protein RPIC12D_RS15845 392dae4a31ee4269324a01f74f854c58 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RPIC12D_RS11950 e9579825acb0d50e5fa29ee3cda51e6d 94 PANTHER PTHR33175 1 91 7.1E-36 T 22-04-2016 RPIC12D_RS11950 e9579825acb0d50e5fa29ee3cda51e6d 94 SMART SM00411 2 91 6.1E-38 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS11950 e9579825acb0d50e5fa29ee3cda51e6d 94 SUPERFAMILY SSF47729 3 92 2.06E-30 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC12D_RS11950 e9579825acb0d50e5fa29ee3cda51e6d 94 Pfam PF00216 Bacterial DNA-binding protein 3 91 1.7E-31 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS11950 e9579825acb0d50e5fa29ee3cda51e6d 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RPIC12D_RS11950 e9579825acb0d50e5fa29ee3cda51e6d 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 2.7E-14 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS11950 e9579825acb0d50e5fa29ee3cda51e6d 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 2.7E-14 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS11950 e9579825acb0d50e5fa29ee3cda51e6d 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 2.7E-14 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS11950 e9579825acb0d50e5fa29ee3cda51e6d 94 Gene3D G3DSA:4.10.520.10 3 92 1.4E-35 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC12D_RS02035 8ca78e1bd7310641ae8b005ed46dd855 281 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 12 267 54.363 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RPIC12D_RS02035 8ca78e1bd7310641ae8b005ed46dd855 281 SMART SM00650 28 198 7.7E-78 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 RPIC12D_RS02035 8ca78e1bd7310641ae8b005ed46dd855 281 SUPERFAMILY SSF53335 9 266 8.29E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS02035 8ca78e1bd7310641ae8b005ed46dd855 281 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 13 266 1.4E-78 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RPIC12D_RS02035 8ca78e1bd7310641ae8b005ed46dd855 281 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 44 71 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 RPIC12D_RS02035 8ca78e1bd7310641ae8b005ed46dd855 281 Gene3D G3DSA:1.10.8.100 204 266 1.3E-18 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like RPIC12D_RS02035 8ca78e1bd7310641ae8b005ed46dd855 281 PANTHER PTHR11727 10 271 7.3E-87 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RPIC12D_RS02035 8ca78e1bd7310641ae8b005ed46dd855 281 Pfam PF00398 Ribosomal RNA adenine dimethylase 12 265 1.3E-58 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RPIC12D_RS02035 8ca78e1bd7310641ae8b005ed46dd855 281 Gene3D G3DSA:3.40.50.150 9 196 4.5E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS05805 1d749ad1a63387a57b38dc08cd008853 392 Gene3D G3DSA:2.140.10.10 22 389 1.6E-61 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RPIC12D_RS05805 1d749ad1a63387a57b38dc08cd008853 392 SMART SM00564 328 360 11.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC12D_RS05805 1d749ad1a63387a57b38dc08cd008853 392 SMART SM00564 75 106 3.6E-4 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC12D_RS05805 1d749ad1a63387a57b38dc08cd008853 392 SMART SM00564 287 319 23.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC12D_RS05805 1d749ad1a63387a57b38dc08cd008853 392 SMART SM00564 153 185 0.01 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC12D_RS05805 1d749ad1a63387a57b38dc08cd008853 392 SMART SM00564 198 230 8.9 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC12D_RS05805 1d749ad1a63387a57b38dc08cd008853 392 SMART SM00564 249 281 700.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC12D_RS05805 1d749ad1a63387a57b38dc08cd008853 392 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 21 389 6.6E-134 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB RPIC12D_RS05805 1d749ad1a63387a57b38dc08cd008853 392 SUPERFAMILY SSF50998 41 383 2.69E-75 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RPIC12D_RS05805 1d749ad1a63387a57b38dc08cd008853 392 Pfam PF13360 PQQ-like domain 88 318 2.6E-58 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat RPIC12D_RS05805 1d749ad1a63387a57b38dc08cd008853 392 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 16 391 38.481 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB RPIC12D_RS05805 1d749ad1a63387a57b38dc08cd008853 392 PANTHER PTHR32303:SF8 1 382 4.8E-59 T 22-04-2016 RPIC12D_RS05805 1d749ad1a63387a57b38dc08cd008853 392 PANTHER PTHR32303 1 382 4.8E-59 T 22-04-2016 RPIC12D_RS00800 0459ab996b2fb43a017f4d12bd7c7e15 330 PANTHER PTHR11820:SF85 8 324 4.4E-131 T 22-04-2016 RPIC12D_RS00800 0459ab996b2fb43a017f4d12bd7c7e15 330 SUPERFAMILY SSF56529 77 324 7.06E-59 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC12D_RS00800 0459ab996b2fb43a017f4d12bd7c7e15 330 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 323 9.9E-40 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC12D_RS00800 0459ab996b2fb43a017f4d12bd7c7e15 330 Gene3D G3DSA:3.90.850.10 67 308 2.2E-41 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC12D_RS00800 0459ab996b2fb43a017f4d12bd7c7e15 330 PANTHER PTHR11820 8 324 4.4E-131 T 22-04-2016 RPIC12D_RS03655 8e044611c7aa3118cb50fcdc5d61cb42 371 PANTHER PTHR30574 4 362 2.5E-44 T 22-04-2016 RPIC12D_RS03655 8e044611c7aa3118cb50fcdc5d61cb42 371 PANTHER PTHR30574:SF1 4 362 2.5E-44 T 22-04-2016 RPIC12D_RS03655 8e044611c7aa3118cb50fcdc5d61cb42 371 Pfam PF04143 Sulphur transport 30 358 2.9E-59 T 22-04-2016 IPR007272 Sulphur transport domain RPIC12D_RS06835 d64a0067072c0a8b0c663ba3f309ac43 283 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 14 282 75.548 T 22-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein RPIC12D_RS06835 d64a0067072c0a8b0c663ba3f309ac43 283 PANTHER PTHR31756:SF3 3 279 3.6E-93 T 22-04-2016 RPIC12D_RS06835 d64a0067072c0a8b0c663ba3f309ac43 283 PANTHER PTHR31756 3 279 3.6E-93 T 22-04-2016 RPIC12D_RS06835 d64a0067072c0a8b0c663ba3f309ac43 283 Pfam PF03618 Kinase/pyrophosphorylase 17 273 3.5E-81 T 22-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 RPIC12D_RS07420 106ee4312f89894d74fdcb99ad1fbaa0 318 PANTHER PTHR11260 153 217 9.1E-37 T 22-04-2016 RPIC12D_RS07420 106ee4312f89894d74fdcb99ad1fbaa0 318 PANTHER PTHR11260 1 131 9.1E-37 T 22-04-2016 RPIC12D_RS07420 106ee4312f89894d74fdcb99ad1fbaa0 318 Gene3D G3DSA:3.40.30.10 4 85 2.1E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS07420 106ee4312f89894d74fdcb99ad1fbaa0 318 Gene3D G3DSA:1.20.1050.10 88 225 3.2E-12 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS07420 106ee4312f89894d74fdcb99ad1fbaa0 318 Pfam PF13410 Glutathione S-transferase, C-terminal domain 159 216 1.0E-10 T 22-04-2016 RPIC12D_RS07420 106ee4312f89894d74fdcb99ad1fbaa0 318 SUPERFAMILY SSF52833 3 100 1.92E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS07420 106ee4312f89894d74fdcb99ad1fbaa0 318 SUPERFAMILY SSF47616 144 219 9.14E-13 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS07420 106ee4312f89894d74fdcb99ad1fbaa0 318 PANTHER PTHR11260:SF192 153 217 9.1E-37 T 22-04-2016 RPIC12D_RS07420 106ee4312f89894d74fdcb99ad1fbaa0 318 PANTHER PTHR11260:SF192 1 131 9.1E-37 T 22-04-2016 RPIC12D_RS07420 106ee4312f89894d74fdcb99ad1fbaa0 318 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 80 2.1E-12 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC12D_RS08095 bcdd03b872237962cc750e7142801be2 235 SUPERFAMILY SSF55469 15 233 4.71E-51 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RPIC12D_RS08095 bcdd03b872237962cc750e7142801be2 235 Pfam PF00881 Nitroreductase family 18 210 1.3E-38 T 22-04-2016 IPR029479 Nitroreductase RPIC12D_RS08095 bcdd03b872237962cc750e7142801be2 235 PANTHER PTHR23026:SF90 2 235 3.6E-40 T 22-04-2016 RPIC12D_RS08095 bcdd03b872237962cc750e7142801be2 235 PANTHER PTHR23026 2 235 3.6E-40 T 22-04-2016 RPIC12D_RS08095 bcdd03b872237962cc750e7142801be2 235 Gene3D G3DSA:3.40.109.10 136 234 5.5E-49 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RPIC12D_RS08095 bcdd03b872237962cc750e7142801be2 235 Gene3D G3DSA:3.40.109.10 12 80 5.5E-49 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RPIC12D_RS16270 056bc9ca853dc19e7db13410caeb99f1 95 PANTHER PTHR10029 4 94 4.0E-26 T 22-04-2016 RPIC12D_RS16270 056bc9ca853dc19e7db13410caeb99f1 95 Gene3D G3DSA:3.30.70.100 6 92 6.4E-25 T 22-04-2016 RPIC12D_RS16270 056bc9ca853dc19e7db13410caeb99f1 95 PRINTS PR00112 Acylphosphatase signature 6 21 2.1E-6 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RPIC12D_RS16270 056bc9ca853dc19e7db13410caeb99f1 95 PRINTS PR00112 Acylphosphatase signature 27 52 2.1E-6 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RPIC12D_RS16270 056bc9ca853dc19e7db13410caeb99f1 95 Pfam PF00708 Acylphosphatase 6 92 1.5E-22 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RPIC12D_RS16270 056bc9ca853dc19e7db13410caeb99f1 95 ProSitePatterns PS00151 Acylphosphatase signature 2. 35 51 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RPIC12D_RS16270 056bc9ca853dc19e7db13410caeb99f1 95 PANTHER PTHR10029:SF3 4 94 4.0E-26 T 22-04-2016 RPIC12D_RS16270 056bc9ca853dc19e7db13410caeb99f1 95 SUPERFAMILY SSF54975 4 92 2.62E-24 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RPIC12D_RS16075 9dcc5a3b00d27f7dc0873bea5b6314ed 252 PANTHER PTHR30269 1 248 4.6E-71 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIC12D_RS16075 9dcc5a3b00d27f7dc0873bea5b6314ed 252 PANTHER PTHR30269:SF0 1 248 4.6E-71 T 22-04-2016 RPIC12D_RS16075 9dcc5a3b00d27f7dc0873bea5b6314ed 252 Pfam PF01925 Sulfite exporter TauE/SafE 6 244 1.7E-41 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIC12D_RS09130 10abc80c65d918e0694f02319530cc00 397 PIRSF PIRSF001413 2 397 1.6E-165 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RPIC12D_RS09130 10abc80c65d918e0694f02319530cc00 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 4 393 52.771 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RPIC12D_RS09130 10abc80c65d918e0694f02319530cc00 397 PANTHER PTHR10314:SF3 9 391 1.5E-234 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RPIC12D_RS09130 10abc80c65d918e0694f02319530cc00 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 56 380 3.4E-48 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC12D_RS09130 10abc80c65d918e0694f02319530cc00 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 83 97 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RPIC12D_RS09130 10abc80c65d918e0694f02319530cc00 397 Gene3D G3DSA:3.40.50.1100 180 395 3.5E-99 T 22-04-2016 RPIC12D_RS09130 10abc80c65d918e0694f02319530cc00 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 391 2.6E-194 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RPIC12D_RS09130 10abc80c65d918e0694f02319530cc00 397 SUPERFAMILY SSF53686 5 391 3.01E-150 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC12D_RS09130 10abc80c65d918e0694f02319530cc00 397 PANTHER PTHR10314 9 391 1.5E-234 T 22-04-2016 RPIC12D_RS09130 10abc80c65d918e0694f02319530cc00 397 Gene3D G3DSA:3.40.50.1100 100 179 1.6E-21 T 22-04-2016 RPIC12D_RS10690 e5f78e4f71621668c0821b23c21c48bf 550 Gene3D G3DSA:1.20.210.10 85 524 3.5E-40 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS10690 e5f78e4f71621668c0821b23c21c48bf 550 PANTHER PTHR10422:SF21 71 519 5.6E-44 T 22-04-2016 RPIC12D_RS10690 e5f78e4f71621668c0821b23c21c48bf 550 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 96 507 4.8E-76 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS10690 e5f78e4f71621668c0821b23c21c48bf 550 PANTHER PTHR10422 71 519 5.6E-44 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS10690 e5f78e4f71621668c0821b23c21c48bf 550 SUPERFAMILY SSF81442 92 535 9.03E-91 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC12D_RS04245 c338e6953a8e660a7a8dea2f3a9168e4 142 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 3 93 1.4E-36 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 RPIC12D_RS04245 c338e6953a8e660a7a8dea2f3a9168e4 142 PANTHER PTHR33175:SF5 2 94 6.3E-40 T 22-04-2016 RPIC12D_RS04245 c338e6953a8e660a7a8dea2f3a9168e4 142 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 3 96 28.781 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 RPIC12D_RS04245 c338e6953a8e660a7a8dea2f3a9168e4 142 Gene3D G3DSA:4.10.520.10 3 93 9.9E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC12D_RS04245 c338e6953a8e660a7a8dea2f3a9168e4 142 SUPERFAMILY SSF47729 3 93 2.36E-28 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC12D_RS04245 c338e6953a8e660a7a8dea2f3a9168e4 142 SMART SM00411 3 93 1.6E-37 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS04245 c338e6953a8e660a7a8dea2f3a9168e4 142 PANTHER PTHR33175 2 94 6.3E-40 T 22-04-2016 RPIC12D_RS04245 c338e6953a8e660a7a8dea2f3a9168e4 142 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 1.9E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS04245 c338e6953a8e660a7a8dea2f3a9168e4 142 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 1.9E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS04245 c338e6953a8e660a7a8dea2f3a9168e4 142 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 1.9E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS04245 c338e6953a8e660a7a8dea2f3a9168e4 142 Pfam PF00216 Bacterial DNA-binding protein 3 92 7.3E-27 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS12015 103827a5f18c80952f603f0c013833dd 206 PANTHER PTHR30625 1 201 6.7E-44 T 22-04-2016 RPIC12D_RS12015 103827a5f18c80952f603f0c013833dd 206 Pfam PF01618 MotA/TolQ/ExbB proton channel family 68 190 3.5E-33 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RPIC12D_RS13980 1551b122b59d1891707a6e7e6854cce8 585 Pfam PF13245 Part of AAA domain 24 98 5.3E-7 T 22-04-2016 RPIC12D_RS13980 1551b122b59d1891707a6e7e6854cce8 585 Gene3D G3DSA:3.40.50.300 445 562 7.9E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13980 1551b122b59d1891707a6e7e6854cce8 585 Pfam PF00580 UvrD/REP helicase N-terminal domain 158 229 5.5E-8 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RPIC12D_RS13980 1551b122b59d1891707a6e7e6854cce8 585 Gene3D G3DSA:3.40.50.300 22 229 1.6E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13980 1551b122b59d1891707a6e7e6854cce8 585 SUPERFAMILY SSF52540 403 455 4.59E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13980 1551b122b59d1891707a6e7e6854cce8 585 SUPERFAMILY SSF52540 23 357 4.59E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS13980 1551b122b59d1891707a6e7e6854cce8 585 SUPERFAMILY SSF52540 490 562 4.59E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS17035 cef74cc61a0ce9dfe403e8b09ab43471 216 Gene3D G3DSA:1.10.357.10 25 215 2.5E-41 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC12D_RS17035 cef74cc61a0ce9dfe403e8b09ab43471 216 SUPERFAMILY SSF46689 24 97 1.28E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS17035 cef74cc61a0ce9dfe403e8b09ab43471 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 53 81 1.4E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS17035 cef74cc61a0ce9dfe403e8b09ab43471 216 SUPERFAMILY SSF48498 105 215 4.85E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC12D_RS17035 cef74cc61a0ce9dfe403e8b09ab43471 216 PANTHER PTHR30055:SF58 19 214 2.0E-55 T 22-04-2016 RPIC12D_RS17035 cef74cc61a0ce9dfe403e8b09ab43471 216 PANTHER PTHR30055 19 214 2.0E-55 T 22-04-2016 RPIC12D_RS14780 9fffd9f557f9fc967d422fdd67f7df5c 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 RPIC12D_RS14780 9fffd9f557f9fc967d422fdd67f7df5c 156 PANTHER PTHR11205 1 156 9.1E-85 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 RPIC12D_RS14780 9fffd9f557f9fc967d422fdd67f7df5c 156 PIRSF PIRSF002122 3 156 1.1E-58 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 RPIC12D_RS14780 9fffd9f557f9fc967d422fdd67f7df5c 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 2.1E-64 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS14780 9fffd9f557f9fc967d422fdd67f7df5c 156 SUPERFAMILY SSF47973 2 149 3.92E-61 T 22-04-2016 IPR023798 Ribosomal protein S7 domain RPIC12D_RS14780 9fffd9f557f9fc967d422fdd67f7df5c 156 Gene3D G3DSA:1.10.455.10 7 156 1.5E-64 T 22-04-2016 IPR023798 Ribosomal protein S7 domain RPIC12D_RS14780 9fffd9f557f9fc967d422fdd67f7df5c 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.05 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RPIC12D_RS14780 9fffd9f557f9fc967d422fdd67f7df5c 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 5.0E-66 T 22-04-2016 IPR023798 Ribosomal protein S7 domain RPIC12D_RS08130 c2a3ef82ab442173454f3ddafbe9e4de 190 SUPERFAMILY SSF56235 1 186 9.62E-29 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS08130 c2a3ef82ab442173454f3ddafbe9e4de 190 Pfam PF00227 Proteasome subunit 2 186 1.0E-10 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 RPIC12D_RS08130 c2a3ef82ab442173454f3ddafbe9e4de 190 Gene3D G3DSA:3.60.20.10 2 169 5.8E-29 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS14110 4d27f15f16e57497ca4d9bcacc1412f3 107 Gene3D G3DSA:1.10.10.60 8 94 1.2E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS14110 4d27f15f16e57497ca4d9bcacc1412f3 107 SUPERFAMILY SSF46689 3 98 6.81E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS14110 4d27f15f16e57497ca4d9bcacc1412f3 107 PANTHER PTHR33215 1 106 1.7E-26 T 22-04-2016 RPIC12D_RS14110 4d27f15f16e57497ca4d9bcacc1412f3 107 Pfam PF01527 Transposase 1 86 4.9E-9 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS14110 4d27f15f16e57497ca4d9bcacc1412f3 107 PANTHER PTHR33215:SF3 1 106 1.7E-26 T 22-04-2016 RPIC12D_RS02285 96456e8b87d07c31304e03cd75e6e63d 159 Hamap MF_01114 Regulatory protein RecX [recX]. 5 152 13.062 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 RPIC12D_RS02285 96456e8b87d07c31304e03cd75e6e63d 159 Gene3D G3DSA:1.10.10.10 104 149 1.0E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS02285 96456e8b87d07c31304e03cd75e6e63d 159 Pfam PF02631 RecX family 37 146 3.5E-25 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 RPIC12D_RS02285 96456e8b87d07c31304e03cd75e6e63d 159 PANTHER PTHR33602 10 159 1.2E-20 T 22-04-2016 RPIC12D_RS02285 96456e8b87d07c31304e03cd75e6e63d 159 Gene3D G3DSA:1.10.10.10 56 90 8.6E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS02285 96456e8b87d07c31304e03cd75e6e63d 159 Gene3D G3DSA:1.10.10.10 9 55 1.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08900 ba7e1b8d56d2837f50ede0f1986e3db1 765 SUPERFAMILY SSF56003 24 111 3.14E-39 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS08900 ba7e1b8d56d2837f50ede0f1986e3db1 765 SUPERFAMILY SSF56003 149 280 3.14E-39 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS08900 ba7e1b8d56d2837f50ede0f1986e3db1 765 SMART SM01008 248 332 3.3E-23 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC12D_RS08900 ba7e1b8d56d2837f50ede0f1986e3db1 765 Gene3D G3DSA:3.30.365.10 595 764 1.1E-39 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS08900 ba7e1b8d56d2837f50ede0f1986e3db1 765 PIRSF PIRSF036389 1 765 9.7E-265 T 22-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related RPIC12D_RS08900 ba7e1b8d56d2837f50ede0f1986e3db1 765 Gene3D G3DSA:3.90.1170.50 228 330 7.0E-22 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC12D_RS08900 ba7e1b8d56d2837f50ede0f1986e3db1 765 PANTHER PTHR11908 51 760 1.2E-148 T 22-04-2016 RPIC12D_RS08900 ba7e1b8d56d2837f50ede0f1986e3db1 765 Gene3D G3DSA:3.30.365.10 21 111 7.3E-38 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS08900 ba7e1b8d56d2837f50ede0f1986e3db1 765 Gene3D G3DSA:3.30.365.10 149 227 7.3E-38 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS08900 ba7e1b8d56d2837f50ede0f1986e3db1 765 PANTHER PTHR11908:SF2 51 760 1.2E-148 T 22-04-2016 RPIC12D_RS08900 ba7e1b8d56d2837f50ede0f1986e3db1 765 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 54 109 1.5E-8 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS08900 ba7e1b8d56d2837f50ede0f1986e3db1 765 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 360 596 1.2E-26 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS08900 ba7e1b8d56d2837f50ede0f1986e3db1 765 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 638 719 4.2E-15 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS08900 ba7e1b8d56d2837f50ede0f1986e3db1 765 SUPERFAMILY SSF56003 358 764 2.75E-106 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS08900 ba7e1b8d56d2837f50ede0f1986e3db1 765 Gene3D G3DSA:3.30.365.10 432 594 7.3E-29 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC12D_RS02385 7fc80147185e10695228469956a315e5 403 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 20 30 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC12D_RS02385 7fc80147185e10695228469956a315e5 403 PANTHER PTHR11406 1 397 8.1E-195 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC12D_RS02385 7fc80147185e10695228469956a315e5 403 Pfam PF00162 Phosphoglycerate kinase 13 384 9.1E-140 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC12D_RS02385 7fc80147185e10695228469956a315e5 403 Gene3D G3DSA:3.40.50.1260 11 180 8.9E-65 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC12D_RS02385 7fc80147185e10695228469956a315e5 403 PIRSF PIRSF000724 4 401 2.4E-140 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC12D_RS02385 7fc80147185e10695228469956a315e5 403 PRINTS PR00477 Phosphoglycerate kinase family signature 15 31 6.0E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC12D_RS02385 7fc80147185e10695228469956a315e5 403 PRINTS PR00477 Phosphoglycerate kinase family signature 169 191 6.0E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC12D_RS02385 7fc80147185e10695228469956a315e5 403 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 6.0E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC12D_RS02385 7fc80147185e10695228469956a315e5 403 PRINTS PR00477 Phosphoglycerate kinase family signature 37 59 6.0E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC12D_RS02385 7fc80147185e10695228469956a315e5 403 PRINTS PR00477 Phosphoglycerate kinase family signature 347 358 6.0E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC12D_RS02385 7fc80147185e10695228469956a315e5 403 PRINTS PR00477 Phosphoglycerate kinase family signature 370 387 6.0E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC12D_RS02385 7fc80147185e10695228469956a315e5 403 PRINTS PR00477 Phosphoglycerate kinase family signature 138 160 6.0E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC12D_RS02385 7fc80147185e10695228469956a315e5 403 PRINTS PR00477 Phosphoglycerate kinase family signature 192 211 6.0E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC12D_RS02385 7fc80147185e10695228469956a315e5 403 PRINTS PR00477 Phosphoglycerate kinase family signature 314 339 6.0E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC12D_RS02385 7fc80147185e10695228469956a315e5 403 Gene3D G3DSA:3.40.50.1270 181 382 7.0E-82 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC12D_RS02385 7fc80147185e10695228469956a315e5 403 SUPERFAMILY SSF53748 11 394 4.83E-143 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC12D_RS02385 7fc80147185e10695228469956a315e5 403 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 9 394 39.344 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC12D_RS14535 fc460ef4b63d145b558b3eda64633987 210 PANTHER PTHR40278:SF1 6 206 2.1E-33 T 22-04-2016 RPIC12D_RS14535 fc460ef4b63d145b558b3eda64633987 210 PANTHER PTHR40278 6 206 2.1E-33 T 22-04-2016 RPIC12D_RS14535 fc460ef4b63d145b558b3eda64633987 210 Pfam PF05137 Fimbrial assembly protein (PilN) 111 192 2.8E-21 T 22-04-2016 IPR007813 Fimbrial assembly PilN RPIC12D_RS15870 264b14e949ac1ae6cbe7a71b6fea8c49 684 PANTHER PTHR31645 14 670 2.2E-131 T 22-04-2016 RPIC12D_RS15870 264b14e949ac1ae6cbe7a71b6fea8c49 684 PANTHER PTHR31645:SF0 14 670 2.2E-131 T 22-04-2016 RPIC12D_RS15870 264b14e949ac1ae6cbe7a71b6fea8c49 684 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 17 638 3.8E-206 T 22-04-2016 IPR004814 Oligopeptide transporter OPT RPIC12D_RS15870 264b14e949ac1ae6cbe7a71b6fea8c49 684 Pfam PF03169 OPT oligopeptide transporter protein 17 636 6.2E-103 T 22-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 RPIC12D_RS15870 264b14e949ac1ae6cbe7a71b6fea8c49 684 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 14 635 3.7E-107 T 22-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 RPIC12D_RS00820 3ba754bfec94afbf8f589d23eaee5f62 272 PANTHER PTHR11941:SF15 1 269 1.9E-114 T 22-04-2016 RPIC12D_RS00820 3ba754bfec94afbf8f589d23eaee5f62 272 PANTHER PTHR11941 1 269 1.9E-114 T 22-04-2016 RPIC12D_RS00820 3ba754bfec94afbf8f589d23eaee5f62 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 39 270 7.2E-39 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC12D_RS00820 3ba754bfec94afbf8f589d23eaee5f62 272 Gene3D G3DSA:3.90.226.10 9 266 7.4E-57 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS00820 3ba754bfec94afbf8f589d23eaee5f62 272 SUPERFAMILY SSF52096 14 269 1.8E-60 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS00820 3ba754bfec94afbf8f589d23eaee5f62 272 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 114 134 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RPIC12D_RS09760 2d666769835a24600795edbe4e44f873 174 SUPERFAMILY SSF158694 7 171 4.05E-56 T 22-04-2016 RPIC12D_RS09760 2d666769835a24600795edbe4e44f873 174 Gene3D G3DSA:1.10.3330.10 13 172 1.6E-62 T 22-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 RPIC12D_RS09760 2d666769835a24600795edbe4e44f873 174 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 14 170 1.4E-64 T 22-04-2016 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 RPIC12D_RS09760 2d666769835a24600795edbe4e44f873 174 Pfam PF09349 OHCU decarboxylase 12 168 3.9E-48 T 22-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 RPIC12D_RS06065 d0c58723a0151ca63a30529236603229 389 SUPERFAMILY SSF46785 195 270 7.45E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06065 d0c58723a0151ca63a30529236603229 389 PANTHER PTHR34298:SF2 86 310 6.8E-62 T 22-04-2016 RPIC12D_RS06065 d0c58723a0151ca63a30529236603229 389 Gene3D G3DSA:1.10.10.10 194 270 5.5E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06065 d0c58723a0151ca63a30529236603229 389 PANTHER PTHR34298 86 310 6.8E-62 T 22-04-2016 RPIC12D_RS06065 d0c58723a0151ca63a30529236603229 389 SUPERFAMILY SSF46785 112 192 2.93E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06065 d0c58723a0151ca63a30529236603229 389 Gene3D G3DSA:1.10.10.10 113 192 1.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06065 d0c58723a0151ca63a30529236603229 389 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 123 283 1.0E-32 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RPIC12D_RS06065 d0c58723a0151ca63a30529236603229 389 Pfam PF04079 Segregation and condensation complex subunit ScpB 122 279 5.0E-48 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RPIC12D_RS24975 ba025bf84db9f661856d31f097543d39 167 Gene3D G3DSA:3.40.50.720 12 144 2.9E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS24975 ba025bf84db9f661856d31f097543d39 167 PANTHER PTHR16254:SF6 12 162 4.6E-36 T 22-04-2016 RPIC12D_RS24975 ba025bf84db9f661856d31f097543d39 167 Pfam PF02254 TrkA-N domain 16 129 2.1E-24 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RPIC12D_RS24975 ba025bf84db9f661856d31f097543d39 167 PANTHER PTHR16254 12 162 4.6E-36 T 22-04-2016 RPIC12D_RS24975 ba025bf84db9f661856d31f097543d39 167 SUPERFAMILY SSF51735 13 154 2.11E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS15650 d0ab9337eb1badde0dda515d9330c099 573 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 2 563 6.1E-257 T 22-04-2016 IPR030998 Thiosulfohydrolase SoxB RPIC12D_RS15650 d0ab9337eb1badde0dda515d9330c099 573 PANTHER PTHR11575:SF16 102 553 1.3E-168 T 22-04-2016 RPIC12D_RS15650 d0ab9337eb1badde0dda515d9330c099 573 Pfam PF02872 5'-nucleotidase, C-terminal domain 392 519 6.2E-14 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RPIC12D_RS15650 d0ab9337eb1badde0dda515d9330c099 573 Gene3D G3DSA:3.90.780.10 392 560 7.7E-17 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RPIC12D_RS15650 d0ab9337eb1badde0dda515d9330c099 573 SUPERFAMILY SSF55816 372 562 2.09E-30 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RPIC12D_RS15650 d0ab9337eb1badde0dda515d9330c099 573 Gene3D G3DSA:3.60.21.10 36 55 1.4E-78 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS15650 d0ab9337eb1badde0dda515d9330c099 573 Gene3D G3DSA:3.60.21.10 109 372 1.4E-78 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS15650 d0ab9337eb1badde0dda515d9330c099 573 PANTHER PTHR11575 102 553 1.3E-168 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC12D_RS15650 d0ab9337eb1badde0dda515d9330c099 573 PRINTS PR01607 Apyrase family signature 261 278 1.2E-11 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC12D_RS15650 d0ab9337eb1badde0dda515d9330c099 573 PRINTS PR01607 Apyrase family signature 312 332 1.2E-11 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC12D_RS15650 d0ab9337eb1badde0dda515d9330c099 573 PRINTS PR01607 Apyrase family signature 280 303 1.2E-11 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC12D_RS15650 d0ab9337eb1badde0dda515d9330c099 573 PRINTS PR01607 Apyrase family signature 36 54 1.2E-11 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC12D_RS15650 d0ab9337eb1badde0dda515d9330c099 573 SUPERFAMILY SSF56300 109 373 1.33E-78 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS15650 d0ab9337eb1badde0dda515d9330c099 573 SUPERFAMILY SSF56300 34 55 1.33E-78 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS12300 4c15196ecd893e904eb3549c3fbaf3fd 520 SUPERFAMILY SSF81301 181 233 6.76E-36 T 22-04-2016 RPIC12D_RS12300 4c15196ecd893e904eb3549c3fbaf3fd 520 SUPERFAMILY SSF81301 60 154 6.76E-36 T 22-04-2016 RPIC12D_RS12300 4c15196ecd893e904eb3549c3fbaf3fd 520 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 31 504 36.539 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 RPIC12D_RS12300 4c15196ecd893e904eb3549c3fbaf3fd 520 SUPERFAMILY SSF81891 234 468 5.36E-56 T 22-04-2016 RPIC12D_RS12300 4c15196ecd893e904eb3549c3fbaf3fd 520 Gene3D G3DSA:1.10.3090.10 236 465 5.6E-50 T 22-04-2016 RPIC12D_RS12300 4c15196ecd893e904eb3549c3fbaf3fd 520 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 263 325 9.3E-22 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RPIC12D_RS12300 4c15196ecd893e904eb3549c3fbaf3fd 520 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 58 502 1.4E-146 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 RPIC12D_RS12300 4c15196ecd893e904eb3549c3fbaf3fd 520 Pfam PF01743 Poly A polymerase head domain 87 236 8.1E-33 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 RPIC12D_RS12300 4c15196ecd893e904eb3549c3fbaf3fd 520 Gene3D G3DSA:3.30.460.10 69 235 3.2E-47 T 22-04-2016 RPIC12D_RS12300 4c15196ecd893e904eb3549c3fbaf3fd 520 PANTHER PTHR13734:SF47 7 323 5.8E-104 T 22-04-2016 RPIC12D_RS12300 4c15196ecd893e904eb3549c3fbaf3fd 520 PANTHER PTHR13734 7 323 5.8E-104 T 22-04-2016 RPIC12D_RS12300 4c15196ecd893e904eb3549c3fbaf3fd 520 Pfam PF12626 Polymerase A arginine-rich C-terminus 377 501 7.5E-45 T 22-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain RPIC12D_RS00745 cb94619d5547d3e9d74adaad769bdc0a 46 Pfam PF08085 Entericidin EcnA/B family 19 39 7.8E-10 T 22-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 RPIC12D_RS07140 e785b4adafae38129fab778a839d140a 303 SUPERFAMILY SSF53850 87 273 7.6E-34 T 22-04-2016 RPIC12D_RS07140 e785b4adafae38129fab778a839d140a 303 PANTHER PTHR30346 1 296 5.5E-94 T 22-04-2016 RPIC12D_RS07140 e785b4adafae38129fab778a839d140a 303 SUPERFAMILY SSF46785 1 85 1.74E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07140 e785b4adafae38129fab778a839d140a 303 Gene3D G3DSA:3.40.190.10 175 267 2.1E-38 T 22-04-2016 RPIC12D_RS07140 e785b4adafae38129fab778a839d140a 303 Gene3D G3DSA:3.40.190.10 91 174 9.5E-34 T 22-04-2016 RPIC12D_RS07140 e785b4adafae38129fab778a839d140a 303 Gene3D G3DSA:1.10.10.10 1 83 7.6E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07140 e785b4adafae38129fab778a839d140a 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.1E-25 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07140 e785b4adafae38129fab778a839d140a 303 PANTHER PTHR30346:SF0 1 296 5.5E-94 T 22-04-2016 RPIC12D_RS07140 e785b4adafae38129fab778a839d140a 303 Pfam PF03466 LysR substrate binding domain 87 285 2.6E-38 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS07140 e785b4adafae38129fab778a839d140a 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.6E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07140 e785b4adafae38129fab778a839d140a 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.6E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07140 e785b4adafae38129fab778a839d140a 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.6E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS18395 263317e35a6b207c44dd8e7270c3ff63 211 ProSitePatterns PS01219 Ammonium transporters signature. 167 192 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 RPIC12D_RS18395 263317e35a6b207c44dd8e7270c3ff63 211 PANTHER PTHR11730 1 139 1.6E-72 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RPIC12D_RS18395 263317e35a6b207c44dd8e7270c3ff63 211 PANTHER PTHR11730 158 211 1.6E-72 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RPIC12D_RS18395 263317e35a6b207c44dd8e7270c3ff63 211 Pfam PF00909 Ammonium Transporter Family 1 211 3.1E-46 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RPIC12D_RS18395 263317e35a6b207c44dd8e7270c3ff63 211 PANTHER PTHR11730:SF17 1 139 1.6E-72 T 22-04-2016 RPIC12D_RS18395 263317e35a6b207c44dd8e7270c3ff63 211 PANTHER PTHR11730:SF17 158 211 1.6E-72 T 22-04-2016 RPIC12D_RS18395 263317e35a6b207c44dd8e7270c3ff63 211 Gene3D G3DSA:1.10.3430.10 2 211 4.0E-67 T 22-04-2016 IPR029020 Ammonium/urea transporter RPIC12D_RS18395 263317e35a6b207c44dd8e7270c3ff63 211 SUPERFAMILY SSF111352 1 211 2.35E-58 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RPIC12D_RS16195 36d3be1458425a51095196a61eb5470c 179 Gene3D G3DSA:2.170.270.10 26 169 1.1E-43 T 22-04-2016 RPIC12D_RS16195 36d3be1458425a51095196a61eb5470c 179 PANTHER PTHR22884 24 160 9.4E-30 T 22-04-2016 RPIC12D_RS16195 36d3be1458425a51095196a61eb5470c 179 PANTHER PTHR22884:SF346 24 160 9.4E-30 T 22-04-2016 RPIC12D_RS16195 36d3be1458425a51095196a61eb5470c 179 SMART SM00317 29 147 6.5E-30 T 22-04-2016 IPR001214 SET domain GO:0005515 RPIC12D_RS16195 36d3be1458425a51095196a61eb5470c 179 SUPERFAMILY SSF82199 27 167 1.7E-43 T 22-04-2016 RPIC12D_RS16195 36d3be1458425a51095196a61eb5470c 179 Pfam PF00856 SET domain 40 141 3.5E-17 T 22-04-2016 IPR001214 SET domain GO:0005515 RPIC12D_RS13960 f6550bbb2ca6fac31a10bca121a9c86c 165 SUPERFAMILY SSF47188 25 148 1.44E-21 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 RPIC12D_RS13960 f6550bbb2ca6fac31a10bca121a9c86c 165 Gene3D G3DSA:1.20.120.50 25 147 1.8E-16 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 RPIC12D_RS13960 f6550bbb2ca6fac31a10bca121a9c86c 165 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 28 148 1.3E-14 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 RPIC12D_RS07995 a628d272959311fcd3f73851c6ef3e50 285 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 26 269 1.6E-90 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD RPIC12D_RS07995 a628d272959311fcd3f73851c6ef3e50 285 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 18 265 47.213 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD RPIC12D_RS07995 a628d272959311fcd3f73851c6ef3e50 285 Pfam PF13525 Outer membrane lipoprotein 54 258 8.0E-67 T 22-04-2016 RPIC12D_RS07995 a628d272959311fcd3f73851c6ef3e50 285 PANTHER PTHR37423 13 270 4.6E-85 T 22-04-2016 RPIC12D_RS07995 a628d272959311fcd3f73851c6ef3e50 285 Gene3D G3DSA:1.25.40.10 54 232 5.1E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS07995 a628d272959311fcd3f73851c6ef3e50 285 SUPERFAMILY SSF48452 57 128 4.11E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS07995 a628d272959311fcd3f73851c6ef3e50 285 SUPERFAMILY SSF48452 201 248 4.11E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS13520 ff7dcf3bd163acd27972a6048a00f8b6 149 Pfam PF12728 Helix-turn-helix domain 9 57 4.5E-8 T 22-04-2016 RPIC12D_RS13520 ff7dcf3bd163acd27972a6048a00f8b6 149 SUPERFAMILY SSF46955 9 58 3.84E-7 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC12D_RS13520 ff7dcf3bd163acd27972a6048a00f8b6 149 Gene3D G3DSA:1.10.10.10 9 57 9.5E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS13520 ff7dcf3bd163acd27972a6048a00f8b6 149 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 9 56 2.5E-7 T 22-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 RPIC12D_RS01500 9594231636348e6b668fb0229ed1599f 161 PANTHER PTHR36155 1 161 4.6E-102 T 22-04-2016 RPIC12D_RS01500 9594231636348e6b668fb0229ed1599f 161 Gene3D G3DSA:2.10.70.30 103 143 3.1E-31 T 22-04-2016 RPIC12D_RS01500 9594231636348e6b668fb0229ed1599f 161 SUPERFAMILY SSF103165 1 161 2.35E-73 T 22-04-2016 IPR007153 Adenosine specific kinase RPIC12D_RS01500 9594231636348e6b668fb0229ed1599f 161 Pfam PF04008 Adenosine specific kinase 6 160 6.1E-73 T 22-04-2016 IPR007153 Adenosine specific kinase RPIC12D_RS01500 9594231636348e6b668fb0229ed1599f 161 Gene3D G3DSA:3.40.1520.10 14 102 1.3E-49 T 22-04-2016 IPR007153 Adenosine specific kinase RPIC12D_RS01500 9594231636348e6b668fb0229ed1599f 161 PANTHER PTHR36155:SF1 1 161 4.6E-102 T 22-04-2016 RPIC12D_RS05535 49cd95cf56a436c2cd295c4805d95b43 294 SUPERFAMILY SSF48150 117 289 2.09E-43 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC12D_RS05535 49cd95cf56a436c2cd295c4805d95b43 294 PANTHER PTHR10242:SF0 97 293 1.6E-60 T 22-04-2016 RPIC12D_RS05535 49cd95cf56a436c2cd295c4805d95b43 294 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 134 273 1.8E-12 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RPIC12D_RS05535 49cd95cf56a436c2cd295c4805d95b43 294 SMART SM00478 137 289 8.5E-18 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RPIC12D_RS05535 49cd95cf56a436c2cd295c4805d95b43 294 Gene3D G3DSA:1.10.340.30 128 234 1.1E-32 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC12D_RS05535 49cd95cf56a436c2cd295c4805d95b43 294 Gene3D G3DSA:1.10.1670.10 237 290 1.8E-17 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RPIC12D_RS05535 49cd95cf56a436c2cd295c4805d95b43 294 PANTHER PTHR10242 97 293 1.6E-60 T 22-04-2016 RPIC12D_RS12865 d8b698075af1e4769436a41ccd87d631 140 PANTHER PTHR40255 1 140 1.3E-38 T 22-04-2016 RPIC12D_RS12865 d8b698075af1e4769436a41ccd87d631 140 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 140 2.7E-42 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 RPIC12D_RS12865 d8b698075af1e4769436a41ccd87d631 140 PIRSF PIRSF004638 1 140 3.6E-47 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 RPIC12D_RS12565 54e1b9181f5b37a40efc04f7817f7911 291 PANTHER PTHR11048 7 285 9.8E-72 T 22-04-2016 RPIC12D_RS12565 54e1b9181f5b37a40efc04f7817f7911 291 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 12 288 2.9E-98 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 RPIC12D_RS12565 54e1b9181f5b37a40efc04f7817f7911 291 Pfam PF01040 UbiA prenyltransferase family 29 272 7.1E-58 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RPIC12D_RS12565 54e1b9181f5b37a40efc04f7817f7911 291 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 6 289 28.394 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 RPIC12D_RS12565 54e1b9181f5b37a40efc04f7817f7911 291 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 68 90 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site RPIC12D_RS02640 84598efa33548f66715f9e7c909d369b 431 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 23 413 6.9E-134 T 22-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS02640 84598efa33548f66715f9e7c909d369b 431 Gene3D G3DSA:1.20.1250.20 17 221 5.5E-23 T 22-04-2016 RPIC12D_RS02640 84598efa33548f66715f9e7c909d369b 431 Gene3D G3DSA:1.20.1250.20 240 422 4.0E-19 T 22-04-2016 RPIC12D_RS02640 84598efa33548f66715f9e7c909d369b 431 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS02640 84598efa33548f66715f9e7c909d369b 431 Pfam PF07690 Major Facilitator Superfamily 23 376 1.4E-24 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS02640 84598efa33548f66715f9e7c909d369b 431 SUPERFAMILY SSF103473 17 423 7.85E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS02640 84598efa33548f66715f9e7c909d369b 431 PANTHER PTHR23508 11 430 1.1E-263 T 22-04-2016 RPIC12D_RS02640 84598efa33548f66715f9e7c909d369b 431 PANTHER PTHR23508:SF14 11 430 1.1E-263 T 22-04-2016 RPIC12D_RS02640 84598efa33548f66715f9e7c909d369b 431 ProSitePatterns PS00216 Sugar transport proteins signature 1. 294 311 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS16330 a104c2f4e86e8aa643851fd8b1aca318 302 Gene3D G3DSA:3.40.50.1820 18 301 3.1E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS16330 a104c2f4e86e8aa643851fd8b1aca318 302 Pfam PF00561 alpha/beta hydrolase fold 50 287 3.6E-25 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS16330 a104c2f4e86e8aa643851fd8b1aca318 302 SUPERFAMILY SSF53474 23 302 9.82E-66 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS16330 a104c2f4e86e8aa643851fd8b1aca318 302 PANTHER PTHR10992 21 302 1.6E-53 T 22-04-2016 RPIC12D_RS16330 a104c2f4e86e8aa643851fd8b1aca318 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 133 146 4.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS16330 a104c2f4e86e8aa643851fd8b1aca318 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 75 90 4.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS16330 a104c2f4e86e8aa643851fd8b1aca318 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 4.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS09455 272e8dd724e41c9ad9ec1c97271e0abc 491 Pfam PF00361 Proton-conducting membrane transporter 126 424 2.0E-72 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RPIC12D_RS09455 272e8dd724e41c9ad9ec1c97271e0abc 491 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 8 476 3.1E-129 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 RPIC12D_RS09455 272e8dd724e41c9ad9ec1c97271e0abc 491 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 5 478 17.565 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 RPIC12D_RS09455 272e8dd724e41c9ad9ec1c97271e0abc 491 PANTHER PTHR22773 1 489 4.7E-149 T 22-04-2016 RPIC12D_RS09455 272e8dd724e41c9ad9ec1c97271e0abc 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 421 440 5.5E-5 T 22-04-2016 RPIC12D_RS09455 272e8dd724e41c9ad9ec1c97271e0abc 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 5.5E-5 T 22-04-2016 RPIC12D_RS09455 272e8dd724e41c9ad9ec1c97271e0abc 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 5.5E-5 T 22-04-2016 RPIC12D_RS09455 272e8dd724e41c9ad9ec1c97271e0abc 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 308 320 5.5E-5 T 22-04-2016 RPIC12D_RS09455 272e8dd724e41c9ad9ec1c97271e0abc 491 PANTHER PTHR22773:SF41 1 489 4.7E-149 T 22-04-2016 RPIC12D_RS00965 2d77022238a9c18e3dc6e0f4e6dfbb31 245 Pfam PF10042 Uncharacterized conserved protein (DUF2278) 3 234 6.8E-48 T 22-04-2016 IPR019268 Protein of unknown function DUF2278 RPIC12D_RS10595 31efaf0a259a3632773db91aed0f399f 506 PANTHER PTHR11699 1 506 0.0 T 22-04-2016 RPIC12D_RS10595 31efaf0a259a3632773db91aed0f399f 506 Pfam PF00171 Aldehyde dehydrogenase family 32 493 9.9E-164 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS10595 31efaf0a259a3632773db91aed0f399f 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS10595 31efaf0a259a3632773db91aed0f399f 506 SUPERFAMILY SSF53720 11 497 7.33E-162 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS10595 31efaf0a259a3632773db91aed0f399f 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS10595 31efaf0a259a3632773db91aed0f399f 506 Gene3D G3DSA:3.40.309.10 270 469 5.0E-60 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RPIC12D_RS10595 31efaf0a259a3632773db91aed0f399f 506 PANTHER PTHR11699:SF97 1 506 0.0 T 22-04-2016 RPIC12D_RS10595 31efaf0a259a3632773db91aed0f399f 506 Gene3D G3DSA:3.40.605.10 18 269 2.4E-94 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS06520 6f9cef1b00ed935a1a0f3f6b83c38f09 496 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 40 476 1.9E-92 T 22-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 RPIC12D_RS06520 6f9cef1b00ed935a1a0f3f6b83c38f09 496 PANTHER PTHR30618 25 491 2.0E-212 T 22-04-2016 RPIC12D_RS06520 6f9cef1b00ed935a1a0f3f6b83c38f09 496 PANTHER PTHR30618:SF6 25 491 2.0E-212 T 22-04-2016 RPIC12D_RS05145 751f404b69ca1279b6700eef62e4fde4 276 PANTHER PTHR24559 37 258 4.4E-51 T 22-04-2016 RPIC12D_RS05145 751f404b69ca1279b6700eef62e4fde4 276 Gene3D G3DSA:3.30.420.10 102 258 1.9E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS05145 751f404b69ca1279b6700eef62e4fde4 276 SUPERFAMILY SSF53098 102 258 3.92E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS05145 751f404b69ca1279b6700eef62e4fde4 276 Pfam PF13276 HTH-like domain 33 87 2.0E-15 T 22-04-2016 IPR025948 HTH-like domain RPIC12D_RS05145 751f404b69ca1279b6700eef62e4fde4 276 PANTHER PTHR24559:SF185 37 258 4.4E-51 T 22-04-2016 RPIC12D_RS05145 751f404b69ca1279b6700eef62e4fde4 276 Pfam PF13683 Integrase core domain 192 257 7.7E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC12D_RS05960 e45ef4a4965cc6c8d31d628fff473714 438 Gene3D G3DSA:3.40.190.10 147 356 2.5E-41 T 22-04-2016 RPIC12D_RS05960 e45ef4a4965cc6c8d31d628fff473714 438 PANTHER PTHR30061:SF7 6 437 1.1E-153 T 22-04-2016 RPIC12D_RS05960 e45ef4a4965cc6c8d31d628fff473714 438 SUPERFAMILY SSF53850 26 424 4.24E-75 T 22-04-2016 RPIC12D_RS05960 e45ef4a4965cc6c8d31d628fff473714 438 Pfam PF13416 Bacterial extracellular solute-binding protein 44 368 3.6E-43 T 22-04-2016 RPIC12D_RS05960 e45ef4a4965cc6c8d31d628fff473714 438 PANTHER PTHR30061 6 437 1.1E-153 T 22-04-2016 RPIC12D_RS00915 69a5ddacf7d94195bb05e3adad8a245b 229 SUPERFAMILY SSF55681 4 185 3.48E-59 T 22-04-2016 RPIC12D_RS00915 69a5ddacf7d94195bb05e3adad8a245b 229 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 69 84 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RPIC12D_RS00915 69a5ddacf7d94195bb05e3adad8a245b 229 PIRSF PIRSF016262 1 227 1.5E-53 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RPIC12D_RS00915 69a5ddacf7d94195bb05e3adad8a245b 229 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 24 183 1.1E-53 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RPIC12D_RS00915 69a5ddacf7d94195bb05e3adad8a245b 229 Hamap MF_00013 Octanoyltransferase [lipB]. 3 218 35.353 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RPIC12D_RS00915 69a5ddacf7d94195bb05e3adad8a245b 229 Gene3D G3DSA:3.90.1550.10 5 192 9.6E-63 T 22-04-2016 RPIC12D_RS00915 69a5ddacf7d94195bb05e3adad8a245b 229 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 73 126 6.0E-23 T 22-04-2016 RPIC12D_RS00915 69a5ddacf7d94195bb05e3adad8a245b 229 Pfam PF03099 Biotin/lipoate A/B protein ligase family 58 159 1.4E-5 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RPIC12D_RS00915 69a5ddacf7d94195bb05e3adad8a245b 229 PANTHER PTHR10993 4 203 4.8E-63 T 22-04-2016 RPIC12D_RS03645 8d793a46ba58c3d612e798be081711c3 261 Pfam PF13525 Outer membrane lipoprotein 142 261 1.2E-12 T 22-04-2016 RPIC12D_RS03645 8d793a46ba58c3d612e798be081711c3 261 PANTHER PTHR26312 151 261 2.5E-16 T 22-04-2016 RPIC12D_RS03645 8d793a46ba58c3d612e798be081711c3 261 PANTHER PTHR26312 24 29 2.5E-16 T 22-04-2016 RPIC12D_RS03645 8d793a46ba58c3d612e798be081711c3 261 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 139 257 1.3E-37 T 22-04-2016 IPR014162 Tol-Pal system, YbgF RPIC12D_RS03645 8d793a46ba58c3d612e798be081711c3 261 Pfam PF16331 TolA binding protein trimerisation 65 128 5.6E-18 T 22-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 RPIC12D_RS03645 8d793a46ba58c3d612e798be081711c3 261 Gene3D G3DSA:1.25.40.10 144 250 7.4E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS03645 8d793a46ba58c3d612e798be081711c3 261 SUPERFAMILY SSF48452 144 246 4.02E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS03645 8d793a46ba58c3d612e798be081711c3 261 PANTHER PTHR26312:SF74 151 261 2.5E-16 T 22-04-2016 RPIC12D_RS03645 8d793a46ba58c3d612e798be081711c3 261 PANTHER PTHR26312:SF74 24 29 2.5E-16 T 22-04-2016 RPIC12D_RS02370 ee4c65f7453182b216d8a19e08b18086 264 Pfam PF03591 AzlC protein 36 175 6.4E-29 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease RPIC12D_RS02370 ee4c65f7453182b216d8a19e08b18086 264 PANTHER PTHR34979 6 252 2.7E-25 T 22-04-2016 RPIC12D_RS06860 4ec3a0dd61c62678602c391d769d1d8c 145 Gene3D G3DSA:3.30.530.20 1 144 2.1E-42 T 22-04-2016 IPR023393 START-like domain RPIC12D_RS06860 4ec3a0dd61c62678602c391d769d1d8c 145 PANTHER PTHR12901 1 145 2.9E-47 T 22-04-2016 RPIC12D_RS06860 4ec3a0dd61c62678602c391d769d1d8c 145 SUPERFAMILY SSF55961 1 143 2.57E-33 T 22-04-2016 RPIC12D_RS06860 4ec3a0dd61c62678602c391d769d1d8c 145 PANTHER PTHR12901:SF7 1 145 2.9E-47 T 22-04-2016 RPIC12D_RS06860 4ec3a0dd61c62678602c391d769d1d8c 145 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 3.0E-29 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain RPIC12D_RS06230 f0580c1921a494941e3e8ffe10ccfe07 216 Gene3D G3DSA:2.10.109.10 91 212 3.1E-43 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RPIC12D_RS06230 f0580c1921a494941e3e8ffe10ccfe07 216 SUPERFAMILY SSF51306 90 212 2.62E-35 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RPIC12D_RS06230 f0580c1921a494941e3e8ffe10ccfe07 216 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 137 148 4.1E-12 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RPIC12D_RS06230 f0580c1921a494941e3e8ffe10ccfe07 216 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 165 177 4.1E-12 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RPIC12D_RS06230 f0580c1921a494941e3e8ffe10ccfe07 216 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 136 4.1E-12 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RPIC12D_RS06230 f0580c1921a494941e3e8ffe10ccfe07 216 TIGRFAM TIGR00498 lexA: repressor LexA 1 213 2.0E-69 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RPIC12D_RS06230 f0580c1921a494941e3e8ffe10ccfe07 216 Hamap MF_00015 LexA repressor [lexA]. 3 214 32.824 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RPIC12D_RS06230 f0580c1921a494941e3e8ffe10ccfe07 216 SUPERFAMILY SSF46785 3 69 9.53E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06230 f0580c1921a494941e3e8ffe10ccfe07 216 PANTHER PTHR33516 1 213 1.4E-86 T 22-04-2016 RPIC12D_RS06230 f0580c1921a494941e3e8ffe10ccfe07 216 Pfam PF01726 LexA DNA binding domain 1 65 8.1E-27 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 RPIC12D_RS06230 f0580c1921a494941e3e8ffe10ccfe07 216 Gene3D G3DSA:1.10.10.10 1 68 6.2E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06230 f0580c1921a494941e3e8ffe10ccfe07 216 Pfam PF00717 Peptidase S24-like 129 195 2.4E-14 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B RPIC12D_RS06230 f0580c1921a494941e3e8ffe10ccfe07 216 PANTHER PTHR33516:SF2 1 213 1.4E-86 T 22-04-2016 RPIC12D_RS04000 6b8e0eb95ad8d7b14b107e2509c19b39 957 Pfam PF10101 Predicted membrane protein (DUF2339) 181 942 7.3E-168 T 22-04-2016 IPR019286 Protein of unknown function DUF2339, transmembrane RPIC12D_RS04000 6b8e0eb95ad8d7b14b107e2509c19b39 957 PIRSF PIRSF035905 1 951 6.5E-229 T 22-04-2016 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein RPIC12D_RS04000 6b8e0eb95ad8d7b14b107e2509c19b39 957 PANTHER PTHR38434 109 957 1.1E-82 T 22-04-2016 RPIC12D_RS04000 6b8e0eb95ad8d7b14b107e2509c19b39 957 PANTHER PTHR38434:SF1 109 957 1.1E-82 T 22-04-2016 RPIC12D_RS06935 299f6ff4cfaf6e870aa54bd8b8a9f04c 314 SUPERFAMILY SSF53850 102 311 1.01E-35 T 22-04-2016 RPIC12D_RS06935 299f6ff4cfaf6e870aa54bd8b8a9f04c 314 PANTHER PTHR30419:SF10 9 312 4.9E-91 T 22-04-2016 RPIC12D_RS06935 299f6ff4cfaf6e870aa54bd8b8a9f04c 314 Gene3D G3DSA:3.40.190.10 185 277 1.0E-11 T 22-04-2016 RPIC12D_RS06935 299f6ff4cfaf6e870aa54bd8b8a9f04c 314 Gene3D G3DSA:1.10.10.10 14 94 2.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06935 299f6ff4cfaf6e870aa54bd8b8a9f04c 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 74 7.3E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06935 299f6ff4cfaf6e870aa54bd8b8a9f04c 314 SUPERFAMILY SSF46785 11 123 8.65E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06935 299f6ff4cfaf6e870aa54bd8b8a9f04c 314 Gene3D G3DSA:3.40.190.10 105 184 7.7E-18 T 22-04-2016 RPIC12D_RS06935 299f6ff4cfaf6e870aa54bd8b8a9f04c 314 PANTHER PTHR30419 9 312 4.9E-91 T 22-04-2016 RPIC12D_RS06935 299f6ff4cfaf6e870aa54bd8b8a9f04c 314 TIGRFAM TIGR02424 TF_pcaQ: pca operon transcription factor PcaQ 11 311 2.0E-95 T 22-04-2016 IPR012787 Pca transcription factor PcaQ GO:0003677|GO:0019619|GO:0045893 RPIC12D_RS06935 299f6ff4cfaf6e870aa54bd8b8a9f04c 314 Pfam PF03466 LysR substrate binding domain 103 308 7.1E-35 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS06935 299f6ff4cfaf6e870aa54bd8b8a9f04c 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 2.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06935 299f6ff4cfaf6e870aa54bd8b8a9f04c 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 2.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS06935 299f6ff4cfaf6e870aa54bd8b8a9f04c 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 2.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 PANTHER PTHR11624 369 464 0.0 T 22-04-2016 IPR033247 Transketolase family RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 PANTHER PTHR11624 560 776 0.0 T 22-04-2016 IPR033247 Transketolase family RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 PANTHER PTHR11624 795 878 0.0 T 22-04-2016 IPR033247 Transketolase family RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 PANTHER PTHR11624 82 301 0.0 T 22-04-2016 IPR033247 Transketolase family RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 PANTHER PTHR11624 492 542 0.0 T 22-04-2016 IPR033247 Transketolase family RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 SUPERFAMILY SSF52518 65 473 1.65E-137 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 91 303 5.4E-9 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 SUPERFAMILY SSF52518 479 706 4.83E-98 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 SUPERFAMILY SSF52922 708 895 4.97E-57 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 PANTHER PTHR11624:SF67 369 464 0.0 T 22-04-2016 RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 PANTHER PTHR11624:SF67 560 776 0.0 T 22-04-2016 RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 PANTHER PTHR11624:SF67 795 878 0.0 T 22-04-2016 RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 PANTHER PTHR11624:SF67 82 301 0.0 T 22-04-2016 RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 PANTHER PTHR11624:SF67 492 542 0.0 T 22-04-2016 RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 PIRSF PIRSF000156 5 896 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 14 895 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 Gene3D G3DSA:3.40.50.970 478 711 3.4E-120 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 Gene3D G3DSA:3.40.50.970 65 473 1.7E-155 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS08140 11c618c23e717b846d89c6f63b8a479e 896 Gene3D G3DSA:3.40.50.920 714 895 9.7E-74 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RPIC12D_RS08335 58554fb4c40e26cc2a0a8fc7c85cabb9 561 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 457 558 5.5E-51 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 RPIC12D_RS08335 58554fb4c40e26cc2a0a8fc7c85cabb9 561 SUPERFAMILY SSF54373 220 315 5.89E-37 T 22-04-2016 RPIC12D_RS08335 58554fb4c40e26cc2a0a8fc7c85cabb9 561 PANTHER PTHR10617:SF107 12 484 4.1E-241 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 RPIC12D_RS08335 58554fb4c40e26cc2a0a8fc7c85cabb9 561 PANTHER PTHR10617 12 484 4.1E-241 T 22-04-2016 RPIC12D_RS08335 58554fb4c40e26cc2a0a8fc7c85cabb9 561 Pfam PF13450 NAD(P)-binding Rossmann-like domain 22 72 2.8E-7 T 22-04-2016 RPIC12D_RS08335 58554fb4c40e26cc2a0a8fc7c85cabb9 561 SUPERFAMILY SSF54862 461 560 8.19E-29 T 22-04-2016 RPIC12D_RS08335 58554fb4c40e26cc2a0a8fc7c85cabb9 561 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 19 41 4.1E-5 T 22-04-2016 RPIC12D_RS08335 58554fb4c40e26cc2a0a8fc7c85cabb9 561 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 188 203 4.1E-5 T 22-04-2016 RPIC12D_RS08335 58554fb4c40e26cc2a0a8fc7c85cabb9 561 Gene3D G3DSA:3.30.70.20 504 545 4.1E-4 T 22-04-2016 RPIC12D_RS08335 58554fb4c40e26cc2a0a8fc7c85cabb9 561 SUPERFAMILY SSF51905 316 459 7.02E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS08335 58554fb4c40e26cc2a0a8fc7c85cabb9 561 SUPERFAMILY SSF51905 13 219 7.02E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS08335 58554fb4c40e26cc2a0a8fc7c85cabb9 561 Gene3D G3DSA:3.50.50.60 16 291 1.9E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS07840 c0e63dd3a4c2f3c7a62defd5989a704c 468 PANTHER PTHR30600 53 361 8.1E-80 T 22-04-2016 RPIC12D_RS07840 c0e63dd3a4c2f3c7a62defd5989a704c 468 PANTHER PTHR30600 396 431 8.1E-80 T 22-04-2016 RPIC12D_RS07840 c0e63dd3a4c2f3c7a62defd5989a704c 468 PANTHER PTHR30600:SF5 53 361 8.1E-80 T 22-04-2016 RPIC12D_RS07840 c0e63dd3a4c2f3c7a62defd5989a704c 468 PANTHER PTHR30600:SF5 396 431 8.1E-80 T 22-04-2016 RPIC12D_RS07840 c0e63dd3a4c2f3c7a62defd5989a704c 468 Pfam PF03150 Di-haem cytochrome c peroxidase 55 226 6.5E-39 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 RPIC12D_RS07840 c0e63dd3a4c2f3c7a62defd5989a704c 468 Gene3D G3DSA:1.10.760.10 324 426 4.4E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS07840 c0e63dd3a4c2f3c7a62defd5989a704c 468 Gene3D G3DSA:1.10.760.10 230 275 4.4E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS07840 c0e63dd3a4c2f3c7a62defd5989a704c 468 Gene3D G3DSA:1.10.760.10 48 229 4.4E-36 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS07840 c0e63dd3a4c2f3c7a62defd5989a704c 468 SUPERFAMILY SSF46626 324 422 3.14E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS07840 c0e63dd3a4c2f3c7a62defd5989a704c 468 SUPERFAMILY SSF46626 201 275 3.14E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS07840 c0e63dd3a4c2f3c7a62defd5989a704c 468 SUPERFAMILY SSF46626 56 209 1.32E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS04875 d36f8daa02c5a9b4ee5720d607478986 243 Gene3D G3DSA:3.30.950.10 128 241 2.3E-25 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RPIC12D_RS04875 d36f8daa02c5a9b4ee5720d607478986 243 PANTHER PTHR21091 63 185 5.7E-22 T 22-04-2016 RPIC12D_RS04875 d36f8daa02c5a9b4ee5720d607478986 243 PANTHER PTHR21091:SF118 63 185 5.7E-22 T 22-04-2016 RPIC12D_RS04875 d36f8daa02c5a9b4ee5720d607478986 243 PIRSF PIRSF005917 1 240 1.7E-49 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS04875 d36f8daa02c5a9b4ee5720d607478986 243 SUPERFAMILY SSF53790 3 238 6.67E-59 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RPIC12D_RS16410 226a8571b92b4f25d888d7685dfcad27 215 SUPERFAMILY SSF46894 143 211 3.74E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS16410 226a8571b92b4f25d888d7685dfcad27 215 SMART SM00421 149 206 1.3E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS16410 226a8571b92b4f25d888d7685dfcad27 215 PANTHER PTHR26402:SF458 5 206 1.1E-36 T 22-04-2016 RPIC12D_RS16410 226a8571b92b4f25d888d7685dfcad27 215 Pfam PF00072 Response regulator receiver domain 7 111 5.7E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS16410 226a8571b92b4f25d888d7685dfcad27 215 Gene3D G3DSA:3.40.50.2300 5 125 1.8E-20 T 22-04-2016 RPIC12D_RS16410 226a8571b92b4f25d888d7685dfcad27 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 3.0E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS16410 226a8571b92b4f25d888d7685dfcad27 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 3.0E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS16410 226a8571b92b4f25d888d7685dfcad27 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 3.0E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS16410 226a8571b92b4f25d888d7685dfcad27 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 2.4E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS16410 226a8571b92b4f25d888d7685dfcad27 215 SUPERFAMILY SSF52172 6 135 4.41E-19 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS16410 226a8571b92b4f25d888d7685dfcad27 215 Gene3D G3DSA:1.10.10.10 126 212 4.4E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16410 226a8571b92b4f25d888d7685dfcad27 215 PANTHER PTHR26402 5 206 1.1E-36 T 22-04-2016 RPIC12D_RS16410 226a8571b92b4f25d888d7685dfcad27 215 SMART SM00448 5 121 1.5E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS12925 09d5406d3a2475243560b4b6a1282773 208 PANTHER PTHR30246:SF1 1 208 3.0E-71 T 22-04-2016 RPIC12D_RS12925 09d5406d3a2475243560b4b6a1282773 208 SUPERFAMILY SSF51569 3 203 2.2E-56 T 22-04-2016 RPIC12D_RS12925 09d5406d3a2475243560b4b6a1282773 208 Gene3D G3DSA:3.20.20.70 3 204 1.7E-66 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS12925 09d5406d3a2475243560b4b6a1282773 208 PANTHER PTHR30246 1 208 3.0E-71 T 22-04-2016 RPIC12D_RS12925 09d5406d3a2475243560b4b6a1282773 208 Pfam PF01081 KDPG and KHG aldolase 6 180 2.7E-27 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 RPIC12D_RS04730 3942a6e9ecc9ea733feb9f83944c7adc 319 SUPERFAMILY SSF53822 17 318 4.38E-71 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS04730 3942a6e9ecc9ea733feb9f83944c7adc 319 Gene3D G3DSA:3.40.50.2300 161 304 5.7E-42 T 22-04-2016 RPIC12D_RS04730 3942a6e9ecc9ea733feb9f83944c7adc 319 PANTHER PTHR32196 30 295 1.0E-76 T 22-04-2016 RPIC12D_RS04730 3942a6e9ecc9ea733feb9f83944c7adc 319 PANTHER PTHR32196:SF9 30 295 1.0E-76 T 22-04-2016 RPIC12D_RS04730 3942a6e9ecc9ea733feb9f83944c7adc 319 Gene3D G3DSA:3.40.50.2300 30 160 2.2E-37 T 22-04-2016 RPIC12D_RS04730 3942a6e9ecc9ea733feb9f83944c7adc 319 Pfam PF13407 Periplasmic binding protein domain 37 297 4.7E-50 T 22-04-2016 IPR025997 Periplasmic binding protein RPIC12D_RS16470 5877b5d727d819cf489b123846b73569 159 Gene3D G3DSA:1.10.10.10 1 135 4.2E-49 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16470 5877b5d727d819cf489b123846b73569 159 SUPERFAMILY SSF46785 2 134 6.82E-41 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16470 5877b5d727d819cf489b123846b73569 159 Pfam PF02082 Transcriptional regulator 1 81 1.7E-25 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type RPIC12D_RS16470 5877b5d727d819cf489b123846b73569 159 PANTHER PTHR33221 2 153 2.9E-58 T 22-04-2016 RPIC12D_RS16470 5877b5d727d819cf489b123846b73569 159 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 1.2E-36 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type RPIC12D_RS16470 5877b5d727d819cf489b123846b73569 159 PANTHER PTHR33221:SF4 2 153 2.9E-58 T 22-04-2016 RPIC12D_RS15475 657783bb20f209b0034a234452478076 147 SUPERFAMILY SSF49764 6 145 2.3E-35 T 22-04-2016 IPR008978 HSP20-like chaperone RPIC12D_RS15475 657783bb20f209b0034a234452478076 147 PANTHER PTHR11527:SF122 13 147 2.1E-28 T 22-04-2016 RPIC12D_RS15475 657783bb20f209b0034a234452478076 147 Pfam PF00011 Hsp20/alpha crystallin family 47 146 3.9E-19 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain RPIC12D_RS15475 657783bb20f209b0034a234452478076 147 PANTHER PTHR11527 13 147 2.1E-28 T 22-04-2016 IPR031107 Small heat shock protein HSP20 RPIC12D_RS15475 657783bb20f209b0034a234452478076 147 Gene3D G3DSA:2.60.40.790 7 146 1.6E-34 T 22-04-2016 IPR008978 HSP20-like chaperone RPIC12D_RS01640 7fc33394605e2e7d174412fa14bcdebe 323 Pfam PF07859 alpha/beta hydrolase fold 81 283 3.7E-56 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RPIC12D_RS01640 7fc33394605e2e7d174412fa14bcdebe 323 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 149 161 - T 22-04-2016 IPR033140 Lipase, GDXG, putative serine active site RPIC12D_RS01640 7fc33394605e2e7d174412fa14bcdebe 323 PANTHER PTHR23024:SF47 65 316 1.1E-65 T 22-04-2016 RPIC12D_RS01640 7fc33394605e2e7d174412fa14bcdebe 323 Gene3D G3DSA:3.40.50.1820 11 308 2.7E-67 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS01640 7fc33394605e2e7d174412fa14bcdebe 323 SUPERFAMILY SSF53474 27 306 3.77E-57 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS01640 7fc33394605e2e7d174412fa14bcdebe 323 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 81 97 - T 22-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 RPIC12D_RS01640 7fc33394605e2e7d174412fa14bcdebe 323 PANTHER PTHR23024 65 316 1.1E-65 T 22-04-2016 RPIC12D_RS05525 1e7ec79b3431ccbcb800062685b901a7 216 PANTHER PTHR23083 56 182 6.5E-14 T 22-04-2016 RPIC12D_RS05525 1e7ec79b3431ccbcb800062685b901a7 216 Pfam PF13432 Tetratricopeptide repeat 52 102 5.5E-6 T 22-04-2016 RPIC12D_RS05525 1e7ec79b3431ccbcb800062685b901a7 216 Gene3D G3DSA:1.25.40.10 53 180 4.3E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS05525 1e7ec79b3431ccbcb800062685b901a7 216 SUPERFAMILY SSF48452 55 182 3.08E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS05525 1e7ec79b3431ccbcb800062685b901a7 216 SMART SM00028 79 112 72.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS05525 1e7ec79b3431ccbcb800062685b901a7 216 SMART SM00028 147 175 35.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS05525 1e7ec79b3431ccbcb800062685b901a7 216 SMART SM00028 113 146 29.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS03385 da770abd559d7911a34cd9e86c18ffcf 230 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 207 3.9E-96 T 22-04-2016 IPR021548 Protein of unknown function DUF2895 RPIC12D_RS03385 da770abd559d7911a34cd9e86c18ffcf 230 Pfam PF11444 Protein of unknown function (DUF2895) 7 206 2.4E-90 T 22-04-2016 IPR021548 Protein of unknown function DUF2895 RPIC12D_RS07900 896c9efb45d928733557d7295304812b 173 Pfam PF02627 Carboxymuconolactone decarboxylase family 95 172 8.5E-13 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS07900 896c9efb45d928733557d7295304812b 173 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 111 161 1.5E-7 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS07900 896c9efb45d928733557d7295304812b 173 Hamap MF_01676 Alkyl hydroperoxide reductase AhpD [ahpD]. 1 173 75.256 T 22-04-2016 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS07900 896c9efb45d928733557d7295304812b 173 Gene3D G3DSA:1.20.1290.10 3 171 3.2E-44 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS07900 896c9efb45d928733557d7295304812b 173 SUPERFAMILY SSF69118 3 172 7.59E-40 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS10800 a7899c04ad8f001635ff31cf454463e6 298 PANTHER PTHR30126 8 296 7.3E-80 T 22-04-2016 RPIC12D_RS10800 a7899c04ad8f001635ff31cf454463e6 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 5.3E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS10800 a7899c04ad8f001635ff31cf454463e6 298 Gene3D G3DSA:3.40.190.10 98 200 1.8E-8 T 22-04-2016 RPIC12D_RS10800 a7899c04ad8f001635ff31cf454463e6 298 Gene3D G3DSA:1.10.10.10 8 92 1.0E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS10800 a7899c04ad8f001635ff31cf454463e6 298 PANTHER PTHR30126:SF16 8 296 7.3E-80 T 22-04-2016 RPIC12D_RS10800 a7899c04ad8f001635ff31cf454463e6 298 SUPERFAMILY SSF46785 8 92 1.91E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS10800 a7899c04ad8f001635ff31cf454463e6 298 SUPERFAMILY SSF53850 105 296 9.41E-24 T 22-04-2016 RPIC12D_RS10800 a7899c04ad8f001635ff31cf454463e6 298 Pfam PF03466 LysR substrate binding domain 98 296 2.3E-21 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS13080 86bb90dbc50bd7695a4e74b38eedf82e 304 SUPERFAMILY SSF74653 180 295 1.2E-16 T 22-04-2016 RPIC12D_RS13080 86bb90dbc50bd7695a4e74b38eedf82e 304 Pfam PF13103 TonB C terminal 190 278 4.4E-6 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 RPIC12D_RS13080 86bb90dbc50bd7695a4e74b38eedf82e 304 Gene3D G3DSA:3.30.1150.10 182 295 2.6E-14 T 22-04-2016 RPIC12D_RS13080 86bb90dbc50bd7695a4e74b38eedf82e 304 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 241 293 6.4E-8 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 RPIC12D_RS02755 ba4116b2568ba4df583d5e59f4a0c1af 174 PANTHER PTHR30373 25 173 2.1E-38 T 22-04-2016 RPIC12D_RS02755 ba4116b2568ba4df583d5e59f4a0c1af 174 PANTHER PTHR30373:SF3 25 173 2.1E-38 T 22-04-2016 RPIC12D_RS02755 ba4116b2568ba4df583d5e59f4a0c1af 174 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 29 147 2.5E-9 T 22-04-2016 IPR007621 TPM domain RPIC12D_RS15010 a4ac9e3fb400f2aa2546940bb4fa6c2a 413 SUPERFAMILY SSF48208 29 395 5.61E-72 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RPIC12D_RS15010 a4ac9e3fb400f2aa2546940bb4fa6c2a 413 Gene3D G3DSA:1.50.10.10 35 392 1.0E-43 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 RPIC12D_RS15010 a4ac9e3fb400f2aa2546940bb4fa6c2a 413 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 68 390 4.8E-40 T 22-04-2016 RPIC12D_RS15315 6ac90de097316cdc6bd4da49f730c190 803 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 56 702 1.6E-190 T 22-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 RPIC12D_RS15315 6ac90de097316cdc6bd4da49f730c190 803 Pfam PF00263 Bacterial type II and III secretion system protein 530 697 2.3E-51 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 RPIC12D_RS15315 6ac90de097316cdc6bd4da49f730c190 803 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 642 675 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 RPIC12D_RS15315 6ac90de097316cdc6bd4da49f730c190 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 526 550 1.0E-29 T 22-04-2016 IPR001775 GspD/PilQ family RPIC12D_RS15315 6ac90de097316cdc6bd4da49f730c190 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 432 442 1.0E-29 T 22-04-2016 IPR001775 GspD/PilQ family RPIC12D_RS15315 6ac90de097316cdc6bd4da49f730c190 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 561 571 1.0E-29 T 22-04-2016 IPR001775 GspD/PilQ family RPIC12D_RS15315 6ac90de097316cdc6bd4da49f730c190 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 684 698 1.0E-29 T 22-04-2016 IPR001775 GspD/PilQ family RPIC12D_RS15315 6ac90de097316cdc6bd4da49f730c190 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 661 679 1.0E-29 T 22-04-2016 IPR001775 GspD/PilQ family RPIC12D_RS15315 6ac90de097316cdc6bd4da49f730c190 803 PANTHER PTHR30332:SF8 54 767 1.6E-168 T 22-04-2016 RPIC12D_RS15315 6ac90de097316cdc6bd4da49f730c190 803 PANTHER PTHR30332 54 767 1.6E-168 T 22-04-2016 RPIC12D_RS15315 6ac90de097316cdc6bd4da49f730c190 803 Pfam PF03958 Bacterial type II/III secretion system short domain 216 297 9.0E-17 T 22-04-2016 IPR005644 NolW-like RPIC12D_RS15315 6ac90de097316cdc6bd4da49f730c190 803 Pfam PF03958 Bacterial type II/III secretion system short domain 153 212 9.5E-12 T 22-04-2016 IPR005644 NolW-like RPIC12D_RS15315 6ac90de097316cdc6bd4da49f730c190 803 Pfam PF03958 Bacterial type II/III secretion system short domain 303 432 6.2E-16 T 22-04-2016 IPR005644 NolW-like RPIC12D_RS13660 769c6b7a0753eaec7eb432cf7a78dd19 114 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 84 15.241 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RPIC12D_RS13660 769c6b7a0753eaec7eb432cf7a78dd19 114 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 1 83 9.8E-28 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RPIC12D_RS13660 769c6b7a0753eaec7eb432cf7a78dd19 114 Pfam PF04999 Cell division protein FtsL 2 78 1.0E-17 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RPIC12D_RS14720 bf00a250bf195027c9b3925c6f9a969a 64 Gene3D G3DSA:1.10.287.310 1 60 1.1E-25 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14720 bf00a250bf195027c9b3925c6f9a969a 64 PANTHER PTHR10916 1 60 3.5E-21 T 22-04-2016 RPIC12D_RS14720 bf00a250bf195027c9b3925c6f9a969a 64 SUPERFAMILY SSF46561 1 60 2.22E-20 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14720 bf00a250bf195027c9b3925c6f9a969a 64 Pfam PF00831 Ribosomal L29 protein 4 60 1.9E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14720 bf00a250bf195027c9b3925c6f9a969a 64 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14720 bf00a250bf195027c9b3925c6f9a969a 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 4.7E-20 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14720 bf00a250bf195027c9b3925c6f9a969a 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.554 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS00785 925d23712738182400375e5479faf8d0 279 Gene3D G3DSA:3.40.50.1820 10 268 2.5E-70 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS00785 925d23712738182400375e5479faf8d0 279 PANTHER PTHR10992:SF771 11 269 2.5E-52 T 22-04-2016 RPIC12D_RS00785 925d23712738182400375e5479faf8d0 279 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 19 267 8.5E-79 T 22-04-2016 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185|UniPathway: UPA00157 RPIC12D_RS00785 925d23712738182400375e5479faf8d0 279 SUPERFAMILY SSF53474 10 267 1.05E-67 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS00785 925d23712738182400375e5479faf8d0 279 PANTHER PTHR10992 11 269 2.5E-52 T 22-04-2016 RPIC12D_RS00785 925d23712738182400375e5479faf8d0 279 Pfam PF00561 alpha/beta hydrolase fold 32 254 1.3E-25 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS00785 925d23712738182400375e5479faf8d0 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 1.88E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS00785 925d23712738182400375e5479faf8d0 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 1.88E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS00785 925d23712738182400375e5479faf8d0 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 1.88E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS00785 925d23712738182400375e5479faf8d0 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 1.88E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS07740 7997988b2eaef1469788cf4db07cdc64 468 SUPERFAMILY SSF103473 17 429 1.7E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS07740 7997988b2eaef1469788cf4db07cdc64 468 PANTHER PTHR23508:SF1 11 448 1.3E-171 T 22-04-2016 RPIC12D_RS07740 7997988b2eaef1469788cf4db07cdc64 468 Pfam PF00083 Sugar (and other) transporter 21 219 1.4E-19 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RPIC12D_RS07740 7997988b2eaef1469788cf4db07cdc64 468 PANTHER PTHR23508 11 448 1.3E-171 T 22-04-2016 RPIC12D_RS07740 7997988b2eaef1469788cf4db07cdc64 468 Gene3D G3DSA:1.20.1250.20 269 429 9.3E-11 T 22-04-2016 RPIC12D_RS07740 7997988b2eaef1469788cf4db07cdc64 468 Gene3D G3DSA:1.20.1250.20 19 221 2.7E-19 T 22-04-2016 RPIC12D_RS03980 520ddc8fec8abbbeda9b71c145f5f4ce 249 Gene3D G3DSA:3.10.490.10 51 220 6.2E-24 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like RPIC12D_RS03980 520ddc8fec8abbbeda9b71c145f5f4ce 249 PANTHER PTHR12192 34 227 4.5E-46 T 22-04-2016 IPR006840 ChaC-like protein RPIC12D_RS03980 520ddc8fec8abbbeda9b71c145f5f4ce 249 SUPERFAMILY SSF110857 54 165 1.26E-11 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like RPIC12D_RS03980 520ddc8fec8abbbeda9b71c145f5f4ce 249 PANTHER PTHR12192:SF9 34 227 4.5E-46 T 22-04-2016 RPIC12D_RS03980 520ddc8fec8abbbeda9b71c145f5f4ce 249 Pfam PF04752 ChaC-like protein 54 216 3.0E-39 T 22-04-2016 IPR006840 ChaC-like protein RPIC12D_RS02705 90cc4373345bf6c3e4f6a9d0cbe1ebca 313 PANTHER PTHR35007:SF2 4 311 1.7E-60 T 22-04-2016 RPIC12D_RS02705 90cc4373345bf6c3e4f6a9d0cbe1ebca 313 Pfam PF00482 Type II secretion system (T2SS), protein F 168 296 1.1E-16 T 22-04-2016 IPR018076 Type II secretion system F domain RPIC12D_RS02705 90cc4373345bf6c3e4f6a9d0cbe1ebca 313 PANTHER PTHR35007 4 311 1.7E-60 T 22-04-2016 RPIC12D_RS09815 fd11b474ca88374e7e104971917cd203 311 SUPERFAMILY SSF46785 3 85 1.46E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS09815 fd11b474ca88374e7e104971917cd203 311 Gene3D G3DSA:1.10.10.10 7 88 3.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS09815 fd11b474ca88374e7e104971917cd203 311 PANTHER PTHR30537:SF16 1 308 6.6E-105 T 22-04-2016 RPIC12D_RS09815 fd11b474ca88374e7e104971917cd203 311 Pfam PF03466 LysR substrate binding domain 94 289 1.5E-35 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS09815 fd11b474ca88374e7e104971917cd203 311 Gene3D G3DSA:3.40.190.10 95 178 6.0E-27 T 22-04-2016 RPIC12D_RS09815 fd11b474ca88374e7e104971917cd203 311 PANTHER PTHR30537 1 308 6.6E-105 T 22-04-2016 RPIC12D_RS09815 fd11b474ca88374e7e104971917cd203 311 Gene3D G3DSA:3.40.190.10 179 257 6.9E-29 T 22-04-2016 RPIC12D_RS09815 fd11b474ca88374e7e104971917cd203 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS09815 fd11b474ca88374e7e104971917cd203 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS09815 fd11b474ca88374e7e104971917cd203 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS09815 fd11b474ca88374e7e104971917cd203 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.8E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS09815 fd11b474ca88374e7e104971917cd203 311 SUPERFAMILY SSF53850 93 293 5.07E-35 T 22-04-2016 RPIC12D_RS00105 7235669f89ffe66e04efd72ff1ce0eee 181 PANTHER PTHR23091 14 179 4.2E-21 T 22-04-2016 RPIC12D_RS00105 7235669f89ffe66e04efd72ff1ce0eee 181 PANTHER PTHR23091:SF251 14 179 4.2E-21 T 22-04-2016 RPIC12D_RS00105 7235669f89ffe66e04efd72ff1ce0eee 181 SUPERFAMILY SSF55729 19 179 1.05E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS00105 7235669f89ffe66e04efd72ff1ce0eee 181 Gene3D G3DSA:3.40.630.30 18 179 1.7E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS00105 7235669f89ffe66e04efd72ff1ce0eee 181 Pfam PF00583 Acetyltransferase (GNAT) family 79 154 2.6E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC12D_RS03605 ed140e501579dd89b7677d4929e6ba4a 415 SUPERFAMILY SSF53383 8 415 2.23E-180 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS03605 ed140e501579dd89b7677d4929e6ba4a 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RPIC12D_RS03605 ed140e501579dd89b7677d4929e6ba4a 415 Pfam PF00464 Serine hydroxymethyltransferase 10 384 5.0E-174 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RPIC12D_RS03605 ed140e501579dd89b7677d4929e6ba4a 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 8 415 52.349 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RPIC12D_RS03605 ed140e501579dd89b7677d4929e6ba4a 415 PIRSF PIRSF000412 1 415 4.8E-167 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RPIC12D_RS03605 ed140e501579dd89b7677d4929e6ba4a 415 Gene3D G3DSA:3.90.1150.10 284 415 3.6E-59 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS03605 ed140e501579dd89b7677d4929e6ba4a 415 PANTHER PTHR11680 9 415 9.3E-254 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RPIC12D_RS03605 ed140e501579dd89b7677d4929e6ba4a 415 Gene3D G3DSA:3.40.640.10 38 283 1.2E-104 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS11160 e2f28a023b303dbe9bbe4bb0635a7d77 372 PANTHER PTHR33529:SF2 1 349 8.6E-62 T 22-04-2016 RPIC12D_RS11160 e2f28a023b303dbe9bbe4bb0635a7d77 372 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 347 5.6E-121 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 RPIC12D_RS11160 e2f28a023b303dbe9bbe4bb0635a7d77 372 PANTHER PTHR33529 1 349 8.6E-62 T 22-04-2016 RPIC12D_RS11160 e2f28a023b303dbe9bbe4bb0635a7d77 372 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 346 6.1E-58 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 RPIC12D_RS02865 05597573e4da0607fa6f6651f145de03 305 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 11 302 7.9E-93 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family RPIC12D_RS02865 05597573e4da0607fa6f6651f145de03 305 Gene3D G3DSA:3.40.50.720 11 241 9.1E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02865 05597573e4da0607fa6f6651f145de03 305 PANTHER PTHR10491 2 304 4.0E-85 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family RPIC12D_RS02865 05597573e4da0607fa6f6651f145de03 305 Pfam PF04321 RmlD substrate binding domain 11 302 1.2E-97 T 22-04-2016 IPR029903 RmlD-like substrate binding domain RPIC12D_RS02865 05597573e4da0607fa6f6651f145de03 305 SUPERFAMILY SSF51735 11 302 1.53E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02865 05597573e4da0607fa6f6651f145de03 305 PANTHER PTHR10491:SF4 2 304 4.0E-85 T 22-04-2016 RPIC12D_RS02945 c05368f32c352d40def16c2b96e81617 208 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 153 187 6.1E-11 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC12D_RS02945 c05368f32c352d40def16c2b96e81617 208 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 83 115 3.2E-5 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC12D_RS02945 c05368f32c352d40def16c2b96e81617 208 PANTHER PTHR23416 82 125 1.3E-29 T 22-04-2016 RPIC12D_RS02945 c05368f32c352d40def16c2b96e81617 208 PANTHER PTHR23416 143 202 1.3E-29 T 22-04-2016 RPIC12D_RS02945 c05368f32c352d40def16c2b96e81617 208 SUPERFAMILY SSF51161 31 206 8.19E-33 T 22-04-2016 IPR011004 Trimeric LpxA-like RPIC12D_RS02945 c05368f32c352d40def16c2b96e81617 208 Gene3D G3DSA:2.160.10.10 53 205 6.1E-38 T 22-04-2016 RPIC12D_RS17105 cd6a6712e95104422bdad636fb638b59 437 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 267 421 3.1E-45 T 22-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain RPIC12D_RS17105 cd6a6712e95104422bdad636fb638b59 437 SUPERFAMILY SSF142764 11 428 1.12E-127 T 22-04-2016 RPIC12D_RS17105 cd6a6712e95104422bdad636fb638b59 437 PANTHER PTHR30304 14 432 8.1E-91 T 22-04-2016 RPIC12D_RS17105 cd6a6712e95104422bdad636fb638b59 437 Pfam PF07005 Putative sugar-binding N-terminal domain 11 238 4.3E-69 T 22-04-2016 IPR010737 Putative sugar-binding, N-terminal domain RPIC12D_RS17105 cd6a6712e95104422bdad636fb638b59 437 PANTHER PTHR30304:SF3 14 432 8.1E-91 T 22-04-2016 RPIC12D_RS01345 4de079f9f71816d2df649bfda57143cd 218 PANTHER PTHR18895:SF60 23 171 1.4E-30 T 22-04-2016 RPIC12D_RS01345 4de079f9f71816d2df649bfda57143cd 218 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 139 145 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RPIC12D_RS01345 4de079f9f71816d2df649bfda57143cd 218 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 21 173 5.9E-36 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC12D_RS01345 4de079f9f71816d2df649bfda57143cd 218 Pfam PF03602 Conserved hypothetical protein 95 26 173 3.0E-42 T 22-04-2016 RPIC12D_RS01345 4de079f9f71816d2df649bfda57143cd 218 PANTHER PTHR18895 23 171 1.4E-30 T 22-04-2016 RPIC12D_RS01345 4de079f9f71816d2df649bfda57143cd 218 Gene3D G3DSA:3.40.50.150 19 216 3.4E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS01345 4de079f9f71816d2df649bfda57143cd 218 SUPERFAMILY SSF53335 25 210 1.41E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS03550 87329826cbe2d1e503dfb9cce82ccc6c 263 Pfam PF13681 Type IV pilus assembly protein PilX C-term 109 200 9.7E-15 T 22-04-2016 IPR025205 PilX/PilW C-terminal domain RPIC12D_RS16250 84ff96c4da745b48da2fa8e024483118 477 PANTHER PTHR24023 263 438 5.5E-13 T 22-04-2016 RPIC12D_RS16250 84ff96c4da745b48da2fa8e024483118 477 Gene3D G3DSA:3.40.50.10540 219 419 2.0E-77 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS16250 84ff96c4da745b48da2fa8e024483118 477 Pfam PF02515 CoA-transferase family III 45 207 2.5E-7 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RPIC12D_RS16250 84ff96c4da745b48da2fa8e024483118 477 Pfam PF02515 CoA-transferase family III 221 417 2.1E-46 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RPIC12D_RS16250 84ff96c4da745b48da2fa8e024483118 477 SUPERFAMILY SSF89796 44 218 1.83E-30 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS16250 84ff96c4da745b48da2fa8e024483118 477 PANTHER PTHR24023:SF593 263 438 5.5E-13 T 22-04-2016 RPIC12D_RS16250 84ff96c4da745b48da2fa8e024483118 477 SUPERFAMILY SSF89796 219 474 1.44E-59 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS16250 84ff96c4da745b48da2fa8e024483118 477 Gene3D G3DSA:3.40.50.10540 45 166 1.6E-11 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS12225 c7700d073900acf72895a7f3120920f9 210 SUPERFAMILY SSF52540 5 206 2.87E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12225 c7700d073900acf72895a7f3120920f9 210 Pfam PF00005 ABC transporter 18 162 1.7E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS12225 c7700d073900acf72895a7f3120920f9 210 PANTHER PTHR24220 3 192 8.6E-64 T 22-04-2016 RPIC12D_RS12225 c7700d073900acf72895a7f3120920f9 210 Gene3D G3DSA:3.40.50.300 2 205 6.5E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12225 c7700d073900acf72895a7f3120920f9 210 SMART SM00382 26 210 3.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS12225 c7700d073900acf72895a7f3120920f9 210 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 204 3.9E-59 T 22-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 RPIC12D_RS12225 c7700d073900acf72895a7f3120920f9 210 PANTHER PTHR24220:SF508 3 192 8.6E-64 T 22-04-2016 RPIC12D_RS12225 c7700d073900acf72895a7f3120920f9 210 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS11635 479c1c127b378bb35291329b73b6f01f 327 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 22 300 2.0E-101 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 RPIC12D_RS11635 479c1c127b378bb35291329b73b6f01f 327 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 20 302 38.55 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 RPIC12D_RS11635 479c1c127b378bb35291329b73b6f01f 327 PANTHER PTHR30426 20 326 3.3E-152 T 22-04-2016 RPIC12D_RS11635 479c1c127b378bb35291329b73b6f01f 327 Pfam PF02401 LytB protein 22 298 4.2E-93 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 RPIC12D_RS07665 56de6d5b49a16fc072538184a6c5e3e8 531 Pfam PF03853 YjeF-related protein N-terminus 46 209 2.3E-40 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RPIC12D_RS07665 56de6d5b49a16fc072538184a6c5e3e8 531 SUPERFAMILY SSF64153 27 267 4.97E-55 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RPIC12D_RS07665 56de6d5b49a16fc072538184a6c5e3e8 531 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 246 526 22.124 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RPIC12D_RS07665 56de6d5b49a16fc072538184a6c5e3e8 531 SUPERFAMILY SSF53613 244 519 1.09E-62 T 22-04-2016 IPR029056 Ribokinase-like RPIC12D_RS07665 56de6d5b49a16fc072538184a6c5e3e8 531 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 254 513 2.9E-59 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RPIC12D_RS07665 56de6d5b49a16fc072538184a6c5e3e8 531 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 25 230 21.644 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RPIC12D_RS07665 56de6d5b49a16fc072538184a6c5e3e8 531 PANTHER PTHR12592:SF0 14 530 3.6E-113 T 22-04-2016 RPIC12D_RS07665 56de6d5b49a16fc072538184a6c5e3e8 531 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 37 227 1.3E-32 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RPIC12D_RS07665 56de6d5b49a16fc072538184a6c5e3e8 531 Gene3D G3DSA:3.40.50.10260 28 253 5.0E-63 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RPIC12D_RS07665 56de6d5b49a16fc072538184a6c5e3e8 531 Gene3D G3DSA:3.40.1190.20 254 523 3.4E-79 T 22-04-2016 IPR029056 Ribokinase-like RPIC12D_RS07665 56de6d5b49a16fc072538184a6c5e3e8 531 Pfam PF01256 Carbohydrate kinase 270 499 4.5E-51 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RPIC12D_RS07665 56de6d5b49a16fc072538184a6c5e3e8 531 PANTHER PTHR12592 14 530 3.6E-113 T 22-04-2016 RPIC12D_RS07665 56de6d5b49a16fc072538184a6c5e3e8 531 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 460 470 - T 22-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site RPIC12D_RS07665 56de6d5b49a16fc072538184a6c5e3e8 531 PIRSF PIRSF017184 25 528 2.4E-112 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 RPIC12D_RS15790 aa3527c7447940b54c27c86d08a98e64 595 Gene3D G3DSA:3.40.50.1220 185 335 8.0E-48 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC12D_RS15790 aa3527c7447940b54c27c86d08a98e64 595 SUPERFAMILY SSF52467 186 376 6.55E-46 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC12D_RS15790 aa3527c7447940b54c27c86d08a98e64 595 PANTHER PTHR18968:SF14 1 583 0.0 T 22-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 RPIC12D_RS15790 aa3527c7447940b54c27c86d08a98e64 595 Gene3D G3DSA:3.40.50.970 362 589 4.2E-59 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS15790 aa3527c7447940b54c27c86d08a98e64 595 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 1.9E-52 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RPIC12D_RS15790 aa3527c7447940b54c27c86d08a98e64 595 SUPERFAMILY SSF52518 1 185 2.4E-49 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS15790 aa3527c7447940b54c27c86d08a98e64 595 Gene3D G3DSA:3.40.50.970 3 182 7.2E-63 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS15790 aa3527c7447940b54c27c86d08a98e64 595 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 328 1.6E-34 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RPIC12D_RS15790 aa3527c7447940b54c27c86d08a98e64 595 PANTHER PTHR18968 1 583 0.0 T 22-04-2016 RPIC12D_RS15790 aa3527c7447940b54c27c86d08a98e64 595 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 397 557 1.0E-35 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RPIC12D_RS15790 aa3527c7447940b54c27c86d08a98e64 595 SUPERFAMILY SSF52518 369 571 3.4E-49 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS15790 aa3527c7447940b54c27c86d08a98e64 595 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 3 583 0.0 T 22-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 RPIC12D_RS12815 2f817b36e9602e8c2115c207731d1a46 379 PANTHER PTHR10160 1 369 6.7E-171 T 22-04-2016 RPIC12D_RS12815 2f817b36e9602e8c2115c207731d1a46 379 SUPERFAMILY SSF52283 1 167 8.42E-52 T 22-04-2016 RPIC12D_RS12815 2f817b36e9602e8c2115c207731d1a46 379 SMART SM01003 4 136 3.4E-67 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RPIC12D_RS12815 2f817b36e9602e8c2115c207731d1a46 379 SUPERFAMILY SSF51735 136 318 3.26E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS12815 2f817b36e9602e8c2115c207731d1a46 379 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 370 2.5E-74 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RPIC12D_RS12815 2f817b36e9602e8c2115c207731d1a46 379 SMART SM01002 145 314 1.1E-84 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RPIC12D_RS12815 2f817b36e9602e8c2115c207731d1a46 379 Gene3D G3DSA:3.40.50.1770 187 368 7.8E-41 T 22-04-2016 RPIC12D_RS12815 2f817b36e9602e8c2115c207731d1a46 379 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 1.8E-42 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RPIC12D_RS12815 2f817b36e9602e8c2115c207731d1a46 379 Gene3D G3DSA:3.40.50.1770 2 186 2.6E-61 T 22-04-2016 RPIC12D_RS04635 8f953de6cd12422cea052d564f9fa6d8 202 Pfam PF13302 Acetyltransferase (GNAT) domain 16 157 8.5E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC12D_RS04635 8f953de6cd12422cea052d564f9fa6d8 202 Gene3D G3DSA:3.40.630.30 2 198 2.6E-55 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS04635 8f953de6cd12422cea052d564f9fa6d8 202 PANTHER PTHR13256:SF20 6 199 3.4E-85 T 22-04-2016 RPIC12D_RS04635 8f953de6cd12422cea052d564f9fa6d8 202 PANTHER PTHR13256 6 199 3.4E-85 T 22-04-2016 RPIC12D_RS04635 8f953de6cd12422cea052d564f9fa6d8 202 SUPERFAMILY SSF55729 6 182 2.61E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS09135 e126f696f9c9b2c66aed458339268f30 233 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 6 223 40.049 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 RPIC12D_RS09135 e126f696f9c9b2c66aed458339268f30 233 PANTHER PTHR22854 5 222 4.1E-57 T 22-04-2016 RPIC12D_RS09135 e126f696f9c9b2c66aed458339268f30 233 Gene3D G3DSA:3.20.20.70 6 222 4.4E-64 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS09135 e126f696f9c9b2c66aed458339268f30 233 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 9 218 2.5E-42 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 RPIC12D_RS09135 e126f696f9c9b2c66aed458339268f30 233 PANTHER PTHR22854:SF6 5 222 4.1E-57 T 22-04-2016 RPIC12D_RS09135 e126f696f9c9b2c66aed458339268f30 233 SUPERFAMILY SSF51366 6 221 2.35E-54 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RPIC12D_RS00185 3a1977a9f513a723c2f0d89117194c89 337 PANTHER PTHR32338:SF9 4 320 1.1E-103 T 22-04-2016 RPIC12D_RS00185 3a1977a9f513a723c2f0d89117194c89 337 PANTHER PTHR32338 4 320 1.1E-103 T 22-04-2016 RPIC12D_RS00185 3a1977a9f513a723c2f0d89117194c89 337 SMART SM00859 4 105 4.0E-15 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RPIC12D_RS00185 3a1977a9f513a723c2f0d89117194c89 337 SUPERFAMILY SSF55347 116 288 6.21E-36 T 22-04-2016 RPIC12D_RS00185 3a1977a9f513a723c2f0d89117194c89 337 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 307 52.232 T 22-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS00185 3a1977a9f513a723c2f0d89117194c89 337 SUPERFAMILY SSF51735 1 137 4.5E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS00185 3a1977a9f513a723c2f0d89117194c89 337 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 2 307 1.5E-158 T 22-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC12D_RS00185 3a1977a9f513a723c2f0d89117194c89 337 Gene3D G3DSA:3.30.360.10 125 288 1.3E-34 T 22-04-2016 RPIC12D_RS00185 3a1977a9f513a723c2f0d89117194c89 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 40 99 2.1E-10 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RPIC12D_RS00185 3a1977a9f513a723c2f0d89117194c89 337 Gene3D G3DSA:3.40.50.720 43 124 5.1E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS15665 a1c82ed2c7cead58be2b59855ccc78b9 266 SUPERFAMILY SSF46626 29 146 4.16E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS15665 a1c82ed2c7cead58be2b59855ccc78b9 266 PIRSF PIRSF038455 2 266 9.0E-69 T 22-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 RPIC12D_RS15665 a1c82ed2c7cead58be2b59855ccc78b9 266 SUPERFAMILY SSF46626 151 265 1.08E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS15665 a1c82ed2c7cead58be2b59855ccc78b9 266 Gene3D G3DSA:1.10.760.10 73 265 2.7E-55 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS15665 a1c82ed2c7cead58be2b59855ccc78b9 266 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 40 266 5.0E-74 T 22-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 RPIC12D_RS20120 98f1b677a4d498486020dbbad31d4bd9 73 Gene3D G3DSA:3.40.50.1370 1 72 2.5E-12 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS20120 98f1b677a4d498486020dbbad31d4bd9 73 SUPERFAMILY SSF53671 1 72 5.95E-14 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC12D_RS12800 0301a0cf0511eed41daf062e80bddd65 532 PANTHER PTHR11938:SF50 155 509 2.2E-88 T 22-04-2016 RPIC12D_RS12800 0301a0cf0511eed41daf062e80bddd65 532 Gene3D G3DSA:3.20.20.70 47 490 2.5E-125 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS12800 0301a0cf0511eed41daf062e80bddd65 532 PIRSF PIRSF500060 9 527 7.1E-238 T 22-04-2016 IPR027283 Glutamate synthase large subunit-like protein, bacteria RPIC12D_RS12800 0301a0cf0511eed41daf062e80bddd65 532 PANTHER PTHR11938 155 509 2.2E-88 T 22-04-2016 RPIC12D_RS12800 0301a0cf0511eed41daf062e80bddd65 532 PIRSF PIRSF006429 9 531 3.7E-162 T 22-04-2016 IPR024188 Glutamate synthase large subunit-like protein RPIC12D_RS12800 0301a0cf0511eed41daf062e80bddd65 532 SUPERFAMILY SSF51395 29 489 2.62E-131 T 22-04-2016 RPIC12D_RS12800 0301a0cf0511eed41daf062e80bddd65 532 Pfam PF01645 Conserved region in glutamate synthase 153 470 1.2E-84 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 RPIC12D_RS13535 45f822e5f2305f67dd779295022e5682 420 PANTHER PTHR30012 28 420 1.4E-153 T 22-04-2016 RPIC12D_RS13535 45f822e5f2305f67dd779295022e5682 420 PANTHER PTHR30012:SF0 28 420 1.4E-153 T 22-04-2016 RPIC12D_RS13535 45f822e5f2305f67dd779295022e5682 420 PRINTS PR00812 Bacterial general secretion pathway protein F signature 181 209 8.0E-17 T 22-04-2016 IPR003004 GspF/PilC family RPIC12D_RS13535 45f822e5f2305f67dd779295022e5682 420 PRINTS PR00812 Bacterial general secretion pathway protein F signature 401 420 8.0E-17 T 22-04-2016 IPR003004 GspF/PilC family RPIC12D_RS13535 45f822e5f2305f67dd779295022e5682 420 PRINTS PR00812 Bacterial general secretion pathway protein F signature 82 94 8.0E-17 T 22-04-2016 IPR003004 GspF/PilC family RPIC12D_RS13535 45f822e5f2305f67dd779295022e5682 420 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 399 8.0E-17 T 22-04-2016 IPR003004 GspF/PilC family RPIC12D_RS13535 45f822e5f2305f67dd779295022e5682 420 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 181 209 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 RPIC12D_RS13535 45f822e5f2305f67dd779295022e5682 420 Pfam PF00482 Type II secretion system (T2SS), protein F 86 209 1.9E-34 T 22-04-2016 IPR018076 Type II secretion system F domain RPIC12D_RS13535 45f822e5f2305f67dd779295022e5682 420 Pfam PF00482 Type II secretion system (T2SS), protein F 290 412 4.4E-28 T 22-04-2016 IPR018076 Type II secretion system F domain RPIC12D_RS04690 d6a56da375cad60148de9da1afd5c05f 423 PIRSF PIRSF020818 1 422 3.6E-200 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase RPIC12D_RS04690 d6a56da375cad60148de9da1afd5c05f 423 Gene3D G3DSA:3.40.50.1820 106 412 6.2E-10 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS04690 d6a56da375cad60148de9da1afd5c05f 423 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 411 3.4E-182 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase RPIC12D_RS04690 d6a56da375cad60148de9da1afd5c05f 423 SUPERFAMILY SSF53474 107 410 5.71E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS04690 d6a56da375cad60148de9da1afd5c05f 423 Pfam PF06850 PHB de-polymerase C-terminus 211 412 7.6E-97 T 22-04-2016 IPR009656 PHB de-polymerase, C-terminal RPIC12D_RS05770 7396aefbd538cd6a1bec0e8b285fc136 141 SMART SM00562 3 140 1.2E-81 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC12D_RS05770 7396aefbd538cd6a1bec0e8b285fc136 141 SUPERFAMILY SSF54919 1 140 2.75E-57 T 22-04-2016 RPIC12D_RS05770 7396aefbd538cd6a1bec0e8b285fc136 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.593 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC12D_RS05770 7396aefbd538cd6a1bec0e8b285fc136 141 PANTHER PTHR11349 1 134 8.6E-66 T 22-04-2016 RPIC12D_RS05770 7396aefbd538cd6a1bec0e8b285fc136 141 Pfam PF00334 Nucleoside diphosphate kinase 4 135 1.7E-54 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC12D_RS05770 7396aefbd538cd6a1bec0e8b285fc136 141 Gene3D G3DSA:3.30.70.141 1 138 1.3E-58 T 22-04-2016 RPIC12D_RS05770 7396aefbd538cd6a1bec0e8b285fc136 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.6E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC12D_RS05770 7396aefbd538cd6a1bec0e8b285fc136 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.6E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC12D_RS05770 7396aefbd538cd6a1bec0e8b285fc136 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.6E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC12D_RS05770 7396aefbd538cd6a1bec0e8b285fc136 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.6E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC12D_RS05770 7396aefbd538cd6a1bec0e8b285fc136 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.6E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC12D_RS15885 ad63e6d2b87f37657c093db3b67da563 407 PANTHER PTHR32507 1 407 2.1E-14 T 22-04-2016 RPIC12D_RS15885 ad63e6d2b87f37657c093db3b67da563 407 Pfam PF00999 Sodium/hydrogen exchanger family 23 382 8.6E-26 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RPIC12D_RS12830 4be215dbdf0b553ddc87d2b6e780169a 486 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 483 6.4E-186 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 RPIC12D_RS12830 4be215dbdf0b553ddc87d2b6e780169a 486 PANTHER PTHR10160 3 485 3.0E-220 T 22-04-2016 RPIC12D_RS12830 4be215dbdf0b553ddc87d2b6e780169a 486 SUPERFAMILY SSF52467 314 485 6.54E-74 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC12D_RS12830 4be215dbdf0b553ddc87d2b6e780169a 486 PANTHER PTHR10160:SF24 3 485 3.0E-220 T 22-04-2016 RPIC12D_RS12830 4be215dbdf0b553ddc87d2b6e780169a 486 Gene3D G3DSA:3.40.50.1220 311 485 1.1E-85 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC12D_RS12830 4be215dbdf0b553ddc87d2b6e780169a 486 PIRSF PIRSF000204 1 486 1.6E-209 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 RPIC12D_RS07760 379a7b5ce8ac92fd16bdc9d4f8b1719c 141 Gene3D G3DSA:3.40.630.30 41 141 6.8E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS07760 379a7b5ce8ac92fd16bdc9d4f8b1719c 141 SUPERFAMILY SSF55729 24 141 1.04E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS07760 379a7b5ce8ac92fd16bdc9d4f8b1719c 141 Pfam PF00583 Acetyltransferase (GNAT) family 48 119 1.6E-4 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC12D_RS00435 39550bb62c28cff6584046152493c068 215 PIRSF PIRSF006324 1 214 1.5E-50 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS00435 39550bb62c28cff6584046152493c068 215 PANTHER PTHR30086:SF14 1 208 4.8E-38 T 22-04-2016 RPIC12D_RS00435 39550bb62c28cff6584046152493c068 215 PANTHER PTHR30086 1 208 4.8E-38 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS00435 39550bb62c28cff6584046152493c068 215 Pfam PF01810 LysE type translocator 14 207 8.4E-25 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS13040 105106607a9b91e2d5845c1bd24a6f89 361 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 174 2.5E-24 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RPIC12D_RS13040 105106607a9b91e2d5845c1bd24a6f89 361 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 43 354 27.984 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RPIC12D_RS13040 105106607a9b91e2d5845c1bd24a6f89 361 PIRSF PIRSF005303 38 357 3.0E-76 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RPIC12D_RS13040 105106607a9b91e2d5845c1bd24a6f89 361 Pfam PF02769 AIR synthase related protein, C-terminal domain 187 340 1.7E-10 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC12D_RS13040 105106607a9b91e2d5845c1bd24a6f89 361 Gene3D G3DSA:3.30.1330.10 41 176 7.1E-45 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RPIC12D_RS13040 105106607a9b91e2d5845c1bd24a6f89 361 SUPERFAMILY SSF55326 42 175 1.74E-35 T 22-04-2016 RPIC12D_RS13040 105106607a9b91e2d5845c1bd24a6f89 361 Gene3D G3DSA:3.90.650.10 182 357 1.3E-43 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC12D_RS13040 105106607a9b91e2d5845c1bd24a6f89 361 SUPERFAMILY SSF56042 180 341 1.12E-37 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC12D_RS13040 105106607a9b91e2d5845c1bd24a6f89 361 PANTHER PTHR30270:SF0 43 357 2.3E-101 T 22-04-2016 RPIC12D_RS13040 105106607a9b91e2d5845c1bd24a6f89 361 PANTHER PTHR30270 43 357 2.3E-101 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RPIC12D_RS13040 105106607a9b91e2d5845c1bd24a6f89 361 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 45 357 7.9E-95 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RPIC12D_RS15915 05e1529c44bdd4c86fc7e0cb0a68a9ea 161 Gene3D G3DSA:2.60.120.10 69 155 9.6E-18 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS15915 05e1529c44bdd4c86fc7e0cb0a68a9ea 161 Pfam PF07883 Cupin domain 82 140 2.3E-13 T 22-04-2016 IPR013096 Cupin 2, conserved barrel RPIC12D_RS15915 05e1529c44bdd4c86fc7e0cb0a68a9ea 161 SUPERFAMILY SSF51182 48 152 1.86E-18 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS08590 13b80236280bf499e964457224bb739c 121 PANTHER PTHR33154 13 120 1.1E-27 T 22-04-2016 RPIC12D_RS08590 13b80236280bf499e964457224bb739c 121 Pfam PF01022 Bacterial regulatory protein, arsR family 38 82 4.1E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC12D_RS08590 13b80236280bf499e964457224bb739c 121 SUPERFAMILY SSF46785 26 111 1.75E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08590 13b80236280bf499e964457224bb739c 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 32 47 4.0E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC12D_RS08590 13b80236280bf499e964457224bb739c 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 4.0E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC12D_RS08590 13b80236280bf499e964457224bb739c 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 79 94 4.0E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC12D_RS08590 13b80236280bf499e964457224bb739c 121 SMART SM00418 30 108 6.1E-25 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC12D_RS08590 13b80236280bf499e964457224bb739c 121 Gene3D G3DSA:1.10.10.10 20 112 8.6E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00025 29e98cec3aaf65096aa0235a36c22686 71 PRINTS PR01159 DNA gyrase subunit B signature 40 56 1.5E-9 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00025 29e98cec3aaf65096aa0235a36c22686 71 PRINTS PR01159 DNA gyrase subunit B signature 24 36 1.5E-9 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00025 29e98cec3aaf65096aa0235a36c22686 71 PANTHER PTHR10169 4 71 3.3E-24 T 22-04-2016 RPIC12D_RS00025 29e98cec3aaf65096aa0235a36c22686 71 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 4 60 2.7E-29 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00025 29e98cec3aaf65096aa0235a36c22686 71 Gene3D G3DSA:3.40.50.670 2 53 1.1E-18 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC12D_RS00025 29e98cec3aaf65096aa0235a36c22686 71 SUPERFAMILY SSF56719 2 61 6.54E-17 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RPIC12D_RS00540 0256e93f1fc4056eb7c0c4b29657a350 259 PANTHER PTHR11941:SF28 7 256 2.6E-79 T 22-04-2016 RPIC12D_RS00540 0256e93f1fc4056eb7c0c4b29657a350 259 SUPERFAMILY SSF52096 5 259 6.69E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS00540 0256e93f1fc4056eb7c0c4b29657a350 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 258 1.1E-51 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC12D_RS00540 0256e93f1fc4056eb7c0c4b29657a350 259 Gene3D G3DSA:3.90.226.10 6 200 3.5E-57 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS00540 0256e93f1fc4056eb7c0c4b29657a350 259 Gene3D G3DSA:1.10.12.10 202 259 7.4E-14 T 22-04-2016 IPR014748 Crontonase, C-terminal RPIC12D_RS00540 0256e93f1fc4056eb7c0c4b29657a350 259 PANTHER PTHR11941 7 256 2.6E-79 T 22-04-2016 RPIC12D_RS12510 ffcf56852ea9b4b96b71c06033be54ef 414 PANTHER PTHR32479 14 413 4.9E-110 T 22-04-2016 RPIC12D_RS12510 ffcf56852ea9b4b96b71c06033be54ef 414 PIRSF PIRSF000139 7 414 4.5E-109 T 22-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit RPIC12D_RS12510 ffcf56852ea9b4b96b71c06033be54ef 414 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC12D_RS12510 ffcf56852ea9b4b96b71c06033be54ef 414 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC12D_RS12510 ffcf56852ea9b4b96b71c06033be54ef 414 Pfam PF02754 Cysteine-rich domain 178 260 1.4E-10 T 22-04-2016 IPR004017 Cysteine-rich domain RPIC12D_RS12510 ffcf56852ea9b4b96b71c06033be54ef 414 Pfam PF02754 Cysteine-rich domain 311 395 2.3E-12 T 22-04-2016 IPR004017 Cysteine-rich domain RPIC12D_RS12510 ffcf56852ea9b4b96b71c06033be54ef 414 Gene3D G3DSA:1.10.1060.10 12 102 3.0E-22 T 22-04-2016 RPIC12D_RS12510 ffcf56852ea9b4b96b71c06033be54ef 414 Pfam PF12838 4Fe-4S dicluster domain 24 89 2.1E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC12D_RS12510 ffcf56852ea9b4b96b71c06033be54ef 414 PANTHER PTHR32479:SF2 14 413 4.9E-110 T 22-04-2016 RPIC12D_RS12510 ffcf56852ea9b4b96b71c06033be54ef 414 SUPERFAMILY SSF54862 21 118 9.21E-20 T 22-04-2016 RPIC12D_RS02150 15d374446a921f80f72d739b182711f2 306 SUPERFAMILY SSF54637 52 166 1.54E-7 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS02150 15d374446a921f80f72d739b182711f2 306 PRINTS PR01483 Fatty acid synthase signature 215 236 1.7E-7 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 RPIC12D_RS02150 15d374446a921f80f72d739b182711f2 306 PRINTS PR01483 Fatty acid synthase signature 193 215 1.7E-7 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 RPIC12D_RS02150 15d374446a921f80f72d739b182711f2 306 PANTHER PTHR13078:SF54 19 276 5.6E-35 T 22-04-2016 RPIC12D_RS02150 15d374446a921f80f72d739b182711f2 306 Pfam PF01575 MaoC like domain 195 237 2.9E-12 T 22-04-2016 IPR002539 MaoC-like domain RPIC12D_RS02150 15d374446a921f80f72d739b182711f2 306 PANTHER PTHR13078 19 276 5.6E-35 T 22-04-2016 RPIC12D_RS02150 15d374446a921f80f72d739b182711f2 306 Gene3D G3DSA:3.10.129.10 180 296 5.1E-20 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS02150 15d374446a921f80f72d739b182711f2 306 SUPERFAMILY SSF54637 187 295 4.33E-18 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS15710 e9e9276c62ae5c2565fab885a844d1cd 125 Hamap MF_00048 UPF0102 protein YraN [yraN]. 8 122 23.497 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 RPIC12D_RS15710 e9e9276c62ae5c2565fab885a844d1cd 125 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 8 121 7.8E-28 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 RPIC12D_RS15710 e9e9276c62ae5c2565fab885a844d1cd 125 Pfam PF02021 Uncharacterised protein family UPF0102 15 109 2.4E-27 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 RPIC12D_RS15710 e9e9276c62ae5c2565fab885a844d1cd 125 SUPERFAMILY SSF52980 11 119 4.02E-16 T 22-04-2016 IPR011335 Restriction endonuclease type II-like RPIC12D_RS15710 e9e9276c62ae5c2565fab885a844d1cd 125 PANTHER PTHR34039 4 125 9.6E-39 T 22-04-2016 RPIC12D_RS15710 e9e9276c62ae5c2565fab885a844d1cd 125 PANTHER PTHR34039:SF1 4 125 9.6E-39 T 22-04-2016 RPIC12D_RS15710 e9e9276c62ae5c2565fab885a844d1cd 125 Gene3D G3DSA:3.40.1350.10 15 123 1.1E-36 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 RPIC12D_RS08575 fc901e32e14336ed1dc9f0cadc7d0706 213 Pfam PF01810 LysE type translocator 22 207 1.1E-38 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS08575 fc901e32e14336ed1dc9f0cadc7d0706 213 PANTHER PTHR30086:SF0 7 213 4.7E-73 T 22-04-2016 RPIC12D_RS08575 fc901e32e14336ed1dc9f0cadc7d0706 213 PANTHER PTHR30086 7 213 4.7E-73 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS09730 d9b4a7c794d1f490b6390b008bd7f4d0 425 SUPERFAMILY SSF46626 330 423 4.09E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS09730 d9b4a7c794d1f490b6390b008bd7f4d0 425 Pfam PF06181 Protein of unknown function (DUF989) 4 298 8.8E-143 T 22-04-2016 IPR010389 Domain of unknown function DUF989 RPIC12D_RS00530 82e44d986c251569a28a68e45482539b 253 SMART SM00671 119 152 9.1 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS00530 82e44d986c251569a28a68e45482539b 253 SMART SM00671 153 188 0.0019 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS00530 82e44d986c251569a28a68e45482539b 253 SMART SM00671 45 80 7.3E-6 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS00530 82e44d986c251569a28a68e45482539b 253 SMART SM00671 81 116 1.3E-4 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS00530 82e44d986c251569a28a68e45482539b 253 PANTHER PTHR11102 30 215 2.1E-37 T 22-04-2016 RPIC12D_RS00530 82e44d986c251569a28a68e45482539b 253 Pfam PF08238 Sel1 repeat 45 80 1.0E-5 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS00530 82e44d986c251569a28a68e45482539b 253 Pfam PF08238 Sel1 repeat 120 152 1.7 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS00530 82e44d986c251569a28a68e45482539b 253 Pfam PF08238 Sel1 repeat 158 188 0.0081 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS00530 82e44d986c251569a28a68e45482539b 253 Pfam PF08238 Sel1 repeat 30 44 53.0 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS00530 82e44d986c251569a28a68e45482539b 253 Pfam PF08238 Sel1 repeat 81 115 0.0035 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS00530 82e44d986c251569a28a68e45482539b 253 SUPERFAMILY SSF81901 24 212 1.4E-34 T 22-04-2016 RPIC12D_RS00530 82e44d986c251569a28a68e45482539b 253 Gene3D G3DSA:1.25.40.10 114 196 3.1E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS00530 82e44d986c251569a28a68e45482539b 253 Gene3D G3DSA:1.25.40.10 8 113 3.6E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS14595 6bc91b38f1c78fbb645e950f1de8de11 734 Pfam PF05140 ResB-like family 28 704 4.8E-159 T 22-04-2016 IPR007816 ResB-like domain RPIC12D_RS14595 6bc91b38f1c78fbb645e950f1de8de11 734 PANTHER PTHR31566 15 194 6.2E-36 T 22-04-2016 RPIC12D_RS14595 6bc91b38f1c78fbb645e950f1de8de11 734 PANTHER PTHR31566 587 733 6.2E-36 T 22-04-2016 RPIC12D_RS14595 6bc91b38f1c78fbb645e950f1de8de11 734 PANTHER PTHR31566 229 445 6.2E-36 T 22-04-2016 RPIC12D_RS10410 e8c0be7b8fd154e8f94ae79a3063fc32 263 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 13 258 7.6E-104 T 22-04-2016 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 RPIC12D_RS10410 e8c0be7b8fd154e8f94ae79a3063fc32 263 PANTHER PTHR30136:SF10 8 262 1.8E-85 T 22-04-2016 RPIC12D_RS10410 e8c0be7b8fd154e8f94ae79a3063fc32 263 SUPERFAMILY SSF46785 16 88 1.18E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS10410 e8c0be7b8fd154e8f94ae79a3063fc32 263 PANTHER PTHR30136 8 262 1.8E-85 T 22-04-2016 RPIC12D_RS10410 e8c0be7b8fd154e8f94ae79a3063fc32 263 SUPERFAMILY SSF55781 81 258 3.4E-50 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS10410 e8c0be7b8fd154e8f94ae79a3063fc32 263 Gene3D G3DSA:1.10.10.10 5 75 2.9E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS10410 e8c0be7b8fd154e8f94ae79a3063fc32 263 Gene3D G3DSA:3.30.450.40 82 259 1.2E-56 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS10410 e8c0be7b8fd154e8f94ae79a3063fc32 263 Pfam PF01614 Bacterial transcriptional regulator 134 257 1.7E-35 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RPIC12D_RS10410 e8c0be7b8fd154e8f94ae79a3063fc32 263 Pfam PF09339 IclR helix-turn-helix domain 20 67 3.5E-14 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC12D_RS10410 e8c0be7b8fd154e8f94ae79a3063fc32 263 SMART SM00346 16 104 1.7E-26 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC12D_RS02670 88b189ca406008b99f6c70089c0213e6 360 Pfam PF05987 Bacterial protein of unknown function (DUF898) 26 353 3.7E-112 T 22-04-2016 IPR010295 Protein of unknown function DUF898 RPIC12D_RS01935 ed1c5ed60638ca5148b54c3237cdc9bd 226 PANTHER PTHR23029:SF1 17 214 5.5E-61 T 22-04-2016 RPIC12D_RS01935 ed1c5ed60638ca5148b54c3237cdc9bd 226 SMART SM00855 16 170 5.8E-25 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC12D_RS01935 ed1c5ed60638ca5148b54c3237cdc9bd 226 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 17 209 4.4E-70 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC12D_RS01935 ed1c5ed60638ca5148b54c3237cdc9bd 226 Gene3D G3DSA:3.40.50.1240 15 214 6.0E-70 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC12D_RS01935 ed1c5ed60638ca5148b54c3237cdc9bd 226 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 19 28 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 RPIC12D_RS01935 ed1c5ed60638ca5148b54c3237cdc9bd 226 PANTHER PTHR23029 17 214 5.5E-61 T 22-04-2016 RPIC12D_RS01935 ed1c5ed60638ca5148b54c3237cdc9bd 226 SUPERFAMILY SSF53254 15 217 8.38E-67 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC12D_RS07085 3c06e3082165e0f60b28a837f0146d9e 343 Gene3D G3DSA:3.40.50.20 164 230 1.7E-6 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC12D_RS07085 3c06e3082165e0f60b28a837f0146d9e 343 Pfam PF02625 XdhC and CoxI family 15 82 1.1E-23 T 22-04-2016 IPR003777 XdhC- CoxI RPIC12D_RS07085 3c06e3082165e0f60b28a837f0146d9e 343 PANTHER PTHR30388:SF4 5 343 2.9E-86 T 22-04-2016 RPIC12D_RS07085 3c06e3082165e0f60b28a837f0146d9e 343 PANTHER PTHR30388 5 343 2.9E-86 T 22-04-2016 RPIC12D_RS07085 3c06e3082165e0f60b28a837f0146d9e 343 Pfam PF13478 XdhC Rossmann domain 165 306 4.2E-38 T 22-04-2016 IPR027051 XdhC Rossmann domain RPIC12D_RS05485 9683a6dcaf03c213602c80a9ae9899cd 234 Pfam PF03475 3-alpha domain 176 218 1.8E-13 T 22-04-2016 IPR005163 3-alpha domain RPIC12D_RS05485 9683a6dcaf03c213602c80a9ae9899cd 234 Gene3D G3DSA:2.40.33.20 7 230 5.0E-89 T 22-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like RPIC12D_RS05485 9683a6dcaf03c213602c80a9ae9899cd 234 SUPERFAMILY SSF50800 7 230 3.24E-74 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain RPIC12D_RS05485 9683a6dcaf03c213602c80a9ae9899cd 234 Pfam PF03473 MOSC domain 52 166 1.7E-27 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 RPIC12D_RS05485 9683a6dcaf03c213602c80a9ae9899cd 234 PANTHER PTHR30212:SF2 7 233 1.8E-76 T 22-04-2016 RPIC12D_RS05485 9683a6dcaf03c213602c80a9ae9899cd 234 PANTHER PTHR30212 7 233 1.8E-76 T 22-04-2016 RPIC12D_RS15985 37970ac040aaeeba1f2d722e4e038b28 513 Gene3D G3DSA:1.20.150.20 383 510 2.4E-50 T 22-04-2016 RPIC12D_RS15985 37970ac040aaeeba1f2d722e4e038b28 513 SUPERFAMILY SSF47917 383 510 6.54E-48 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS15985 37970ac040aaeeba1f2d722e4e038b28 513 Gene3D G3DSA:2.40.30.20 1 93 9.6E-35 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS15985 37970ac040aaeeba1f2d722e4e038b28 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 4.6E-74 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS15985 37970ac040aaeeba1f2d722e4e038b28 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.484 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS15985 37970ac040aaeeba1f2d722e4e038b28 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 3.6E-16 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS15985 37970ac040aaeeba1f2d722e4e038b28 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 5.0E-47 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS15985 37970ac040aaeeba1f2d722e4e038b28 513 SUPERFAMILY SSF50615 10 94 5.3E-29 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS15985 37970ac040aaeeba1f2d722e4e038b28 513 SUPERFAMILY SSF52540 96 381 2.22E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15985 37970ac040aaeeba1f2d722e4e038b28 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 511 3.0E-250 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS15985 37970ac040aaeeba1f2d722e4e038b28 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS15985 37970ac040aaeeba1f2d722e4e038b28 513 PANTHER PTHR15184 1 496 1.1E-293 T 22-04-2016 RPIC12D_RS15985 37970ac040aaeeba1f2d722e4e038b28 513 PANTHER PTHR15184:SF3 1 496 1.1E-293 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS15985 37970ac040aaeeba1f2d722e4e038b28 513 Gene3D G3DSA:3.40.50.300 94 382 2.6E-115 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15985 37970ac040aaeeba1f2d722e4e038b28 513 PIRSF PIRSF039088 1 513 6.9E-240 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC12D_RS10845 251833c39501618f8f64cc7267b9ec3e 545 SUPERFAMILY SSF52402 269 528 7.68E-76 T 22-04-2016 RPIC12D_RS10845 251833c39501618f8f64cc7267b9ec3e 545 PANTHER PTHR23090 2 543 8.2E-158 T 22-04-2016 RPIC12D_RS10845 251833c39501618f8f64cc7267b9ec3e 545 Pfam PF02540 NAD synthase 272 520 1.7E-72 T 22-04-2016 IPR022310 NAD/GMP synthase RPIC12D_RS10845 251833c39501618f8f64cc7267b9ec3e 545 Gene3D G3DSA:3.60.110.10 2 252 3.1E-63 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RPIC12D_RS10845 251833c39501618f8f64cc7267b9ec3e 545 SUPERFAMILY SSF56317 3 253 1.24E-61 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RPIC12D_RS10845 251833c39501618f8f64cc7267b9ec3e 545 Gene3D G3DSA:3.40.50.620 268 528 1.2E-77 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS10845 251833c39501618f8f64cc7267b9ec3e 545 TIGRFAM TIGR00552 nadE: NAD+ synthetase 277 524 9.1E-61 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 RPIC12D_RS10845 251833c39501618f8f64cc7267b9ec3e 545 Pfam PF00795 Carbon-nitrogen hydrolase 5 252 5.8E-31 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RPIC12D_RS12900 90c406fa1e70a041ec6157f5318a5bfe 143 Pfam PF01475 Ferric uptake regulator family 10 129 2.1E-45 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 RPIC12D_RS12900 90c406fa1e70a041ec6157f5318a5bfe 143 SUPERFAMILY SSF46785 6 133 4.82E-41 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12900 90c406fa1e70a041ec6157f5318a5bfe 143 Gene3D G3DSA:1.10.10.10 6 82 2.9E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12900 90c406fa1e70a041ec6157f5318a5bfe 143 PANTHER PTHR33202 5 134 3.1E-39 T 22-04-2016 RPIC12D_RS02325 82e08e1b59c8fa0156b7444763a44e83 589 Pfam PF04932 O-Antigen ligase 202 351 7.7E-10 T 22-04-2016 IPR007016 O-antigen ligase-related RPIC12D_RS02325 82e08e1b59c8fa0156b7444763a44e83 589 Pfam PF15864 Protein glycosylation ligase 163 186 2.6E-8 T 22-04-2016 IPR031726 Protein glycosylation ligase domain RPIC12D_RS02325 82e08e1b59c8fa0156b7444763a44e83 589 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 374 544 3.3E-34 T 22-04-2016 IPR021797 Virulence factor membrane-bound polymerase, C-terminal RPIC12D_RS08300 d92c129e323d5966b36c6bb72c3021aa 122 PANTHER PTHR11803:SF17 1 119 2.5E-30 T 22-04-2016 RPIC12D_RS08300 d92c129e323d5966b36c6bb72c3021aa 122 PANTHER PTHR11803 1 119 2.5E-30 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family RPIC12D_RS08300 d92c129e323d5966b36c6bb72c3021aa 122 Pfam PF01042 Endoribonuclease L-PSP 9 119 7.1E-25 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family RPIC12D_RS08300 d92c129e323d5966b36c6bb72c3021aa 122 Gene3D G3DSA:3.30.1330.40 13 119 8.6E-23 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RPIC12D_RS08300 d92c129e323d5966b36c6bb72c3021aa 122 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 96 114 - T 22-04-2016 IPR019897 RidA, conserved site RPIC12D_RS08300 d92c129e323d5966b36c6bb72c3021aa 122 SUPERFAMILY SSF55298 6 120 7.54E-25 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RPIC12D_RS18175 79a0e6a5677d2df1df557a1bee5c803b 151 PANTHER PTHR31956:SF6 24 98 1.9E-25 T 22-04-2016 RPIC12D_RS18175 79a0e6a5677d2df1df557a1bee5c803b 151 Pfam PF04185 Phosphoesterase family 68 151 1.7E-15 T 22-04-2016 IPR007312 Phosphoesterase GO:0016788 RPIC12D_RS18175 79a0e6a5677d2df1df557a1bee5c803b 151 PANTHER PTHR31956 24 98 1.9E-25 T 22-04-2016 RPIC12D_RS15355 4f1a6a4a00d96991869da90a6915b0c9 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 329 4.6E-30 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RPIC12D_RS15355 4f1a6a4a00d96991869da90a6915b0c9 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RPIC12D_RS15355 4f1a6a4a00d96991869da90a6915b0c9 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RPIC12D_RS15355 4f1a6a4a00d96991869da90a6915b0c9 331 SUPERFAMILY SSF51735 104 300 1.2E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS15355 4f1a6a4a00d96991869da90a6915b0c9 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RPIC12D_RS15355 4f1a6a4a00d96991869da90a6915b0c9 331 Gene3D G3DSA:3.40.50.720 1 140 2.0E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS15355 4f1a6a4a00d96991869da90a6915b0c9 331 SUPERFAMILY SSF52283 2 137 9.14E-38 T 22-04-2016 RPIC12D_RS15355 4f1a6a4a00d96991869da90a6915b0c9 331 PANTHER PTHR10996:SF161 1 325 4.1E-157 T 22-04-2016 RPIC12D_RS15355 4f1a6a4a00d96991869da90a6915b0c9 331 PANTHER PTHR10996 1 325 4.1E-157 T 22-04-2016 RPIC12D_RS15355 4f1a6a4a00d96991869da90a6915b0c9 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 299 8.0E-59 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RPIC12D_RS15355 4f1a6a4a00d96991869da90a6915b0c9 331 Gene3D G3DSA:3.40.50.720 141 306 7.8E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS01705 c4a9a465dedc40022c85cc0acdc65147 193 PANTHER PTHR30353:SF12 96 176 2.8E-30 T 22-04-2016 RPIC12D_RS01705 c4a9a465dedc40022c85cc0acdc65147 193 PANTHER PTHR30353:SF12 1 77 2.8E-30 T 22-04-2016 RPIC12D_RS01705 c4a9a465dedc40022c85cc0acdc65147 193 PANTHER PTHR30353 96 176 2.8E-30 T 22-04-2016 IPR032818 DedA family RPIC12D_RS01705 c4a9a465dedc40022c85cc0acdc65147 193 PANTHER PTHR30353 1 77 2.8E-30 T 22-04-2016 IPR032818 DedA family RPIC12D_RS02200 e6a1b8b6d27e071042b7eed44895a7f2 386 SUPERFAMILY SSF51905 265 366 1.69E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS02200 e6a1b8b6d27e071042b7eed44895a7f2 386 SUPERFAMILY SSF51905 8 167 1.69E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS02200 e6a1b8b6d27e071042b7eed44895a7f2 386 Gene3D G3DSA:3.50.50.60 268 345 7.3E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS02200 e6a1b8b6d27e071042b7eed44895a7f2 386 Gene3D G3DSA:3.50.50.60 9 172 7.3E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS02200 e6a1b8b6d27e071042b7eed44895a7f2 386 PANTHER PTHR13789:SF202 5 359 7.4E-43 T 22-04-2016 RPIC12D_RS02200 e6a1b8b6d27e071042b7eed44895a7f2 386 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 3.7E-11 T 22-04-2016 RPIC12D_RS02200 e6a1b8b6d27e071042b7eed44895a7f2 386 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 3.7E-11 T 22-04-2016 RPIC12D_RS02200 e6a1b8b6d27e071042b7eed44895a7f2 386 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 3.7E-11 T 22-04-2016 RPIC12D_RS02200 e6a1b8b6d27e071042b7eed44895a7f2 386 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 3.7E-11 T 22-04-2016 RPIC12D_RS02200 e6a1b8b6d27e071042b7eed44895a7f2 386 PANTHER PTHR13789 5 359 7.4E-43 T 22-04-2016 RPIC12D_RS02200 e6a1b8b6d27e071042b7eed44895a7f2 386 Pfam PF01494 FAD binding domain 9 335 2.2E-20 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 RPIC12D_RS06755 a7626649138862a0f488f47c3e731b88 186 PANTHER PTHR20982 6 186 4.1E-77 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RPIC12D_RS06755 a7626649138862a0f488f47c3e731b88 186 SUPERFAMILY SSF55194 5 185 7.85E-71 T 22-04-2016 IPR023584 Ribosome recycling factor domain RPIC12D_RS06755 a7626649138862a0f488f47c3e731b88 186 Pfam PF01765 Ribosome recycling factor 21 184 1.5E-62 T 22-04-2016 IPR023584 Ribosome recycling factor domain RPIC12D_RS06755 a7626649138862a0f488f47c3e731b88 186 Gene3D G3DSA:1.10.132.20 68 186 3.4E-45 T 22-04-2016 IPR023584 Ribosome recycling factor domain RPIC12D_RS06755 a7626649138862a0f488f47c3e731b88 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 27.224 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RPIC12D_RS06755 a7626649138862a0f488f47c3e731b88 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 186 9.0E-69 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RPIC12D_RS04710 2990ea6a454975eb6b39cbb16047159e 321 PRINTS PR00990 Ribokinase signature 118 131 7.2E-36 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 RPIC12D_RS04710 2990ea6a454975eb6b39cbb16047159e 321 PRINTS PR00990 Ribokinase signature 187 202 7.2E-36 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 RPIC12D_RS04710 2990ea6a454975eb6b39cbb16047159e 321 PRINTS PR00990 Ribokinase signature 231 242 7.2E-36 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 RPIC12D_RS04710 2990ea6a454975eb6b39cbb16047159e 321 PRINTS PR00990 Ribokinase signature 19 40 7.2E-36 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 RPIC12D_RS04710 2990ea6a454975eb6b39cbb16047159e 321 PRINTS PR00990 Ribokinase signature 46 65 7.2E-36 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 RPIC12D_RS04710 2990ea6a454975eb6b39cbb16047159e 321 Gene3D G3DSA:3.40.1190.20 15 312 1.1E-95 T 22-04-2016 IPR029056 Ribokinase-like RPIC12D_RS04710 2990ea6a454975eb6b39cbb16047159e 321 SUPERFAMILY SSF53613 16 312 2.65E-84 T 22-04-2016 IPR029056 Ribokinase-like RPIC12D_RS04710 2990ea6a454975eb6b39cbb16047159e 321 PANTHER PTHR10584:SF184 1 312 3.0E-96 T 22-04-2016 RPIC12D_RS04710 2990ea6a454975eb6b39cbb16047159e 321 Pfam PF00294 pfkB family carbohydrate kinase 16 307 3.4E-74 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB RPIC12D_RS04710 2990ea6a454975eb6b39cbb16047159e 321 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 17 312 6.0E-114 T 22-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 RPIC12D_RS04710 2990ea6a454975eb6b39cbb16047159e 321 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 260 273 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RPIC12D_RS04710 2990ea6a454975eb6b39cbb16047159e 321 PANTHER PTHR10584 1 312 3.0E-96 T 22-04-2016 RPIC12D_RS15205 7b3ecd6f728a9ea1279c3b24ac0b085a 246 SUPERFAMILY SSF54292 66 142 1.7E-26 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS15205 7b3ecd6f728a9ea1279c3b24ac0b085a 246 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 70 119 4.1E-8 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC12D_RS15205 7b3ecd6f728a9ea1279c3b24ac0b085a 246 SUPERFAMILY SSF47741 155 241 2.09E-27 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC12D_RS15205 7b3ecd6f728a9ea1279c3b24ac0b085a 246 PANTHER PTHR11908:SF66 210 239 4.9E-39 T 22-04-2016 RPIC12D_RS15205 7b3ecd6f728a9ea1279c3b24ac0b085a 246 PANTHER PTHR11908:SF66 64 192 4.9E-39 T 22-04-2016 RPIC12D_RS15205 7b3ecd6f728a9ea1279c3b24ac0b085a 246 Gene3D G3DSA:3.10.20.30 65 138 7.4E-32 T 22-04-2016 IPR012675 Beta-grasp domain RPIC12D_RS15205 7b3ecd6f728a9ea1279c3b24ac0b085a 246 Gene3D G3DSA:1.10.150.120 139 242 3.5E-30 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC12D_RS15205 7b3ecd6f728a9ea1279c3b24ac0b085a 246 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 103 111 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RPIC12D_RS15205 7b3ecd6f728a9ea1279c3b24ac0b085a 246 Pfam PF01799 [2Fe-2S] binding domain 137 235 1.1E-29 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC12D_RS15205 7b3ecd6f728a9ea1279c3b24ac0b085a 246 PANTHER PTHR11908 210 239 4.9E-39 T 22-04-2016 RPIC12D_RS15205 7b3ecd6f728a9ea1279c3b24ac0b085a 246 PANTHER PTHR11908 64 192 4.9E-39 T 22-04-2016 RPIC12D_RS06950 7bc7585d68481496c7a79f2694a08586 222 Pfam PF13563 2'-5' RNA ligase superfamily 61 203 1.4E-14 T 22-04-2016 RPIC12D_RS06950 7bc7585d68481496c7a79f2694a08586 222 PANTHER PTHR35561:SF1 47 222 8.7E-27 T 22-04-2016 RPIC12D_RS06950 7bc7585d68481496c7a79f2694a08586 222 PANTHER PTHR35561 47 222 8.7E-27 T 22-04-2016 RPIC12D_RS06950 7bc7585d68481496c7a79f2694a08586 222 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 47 220 1.2E-21 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 RPIC12D_RS06950 7bc7585d68481496c7a79f2694a08586 222 SUPERFAMILY SSF55144 47 220 1.67E-31 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RPIC12D_RS06950 7bc7585d68481496c7a79f2694a08586 222 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 46 220 15.413 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 RPIC12D_RS06950 7bc7585d68481496c7a79f2694a08586 222 Gene3D G3DSA:3.90.1140.10 46 222 5.7E-34 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RPIC12D_RS01415 7de41164b9e722c6f9fae8dda0e0883f 217 PANTHER PTHR23327:SF0 18 134 7.0E-24 T 22-04-2016 RPIC12D_RS01415 7de41164b9e722c6f9fae8dda0e0883f 217 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 19 213 3.4E-25 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RPIC12D_RS01415 7de41164b9e722c6f9fae8dda0e0883f 217 PANTHER PTHR23327 18 134 7.0E-24 T 22-04-2016 RPIC12D_RS01415 7de41164b9e722c6f9fae8dda0e0883f 217 SMART SM00464 19 213 8.7E-12 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RPIC12D_RS01415 7de41164b9e722c6f9fae8dda0e0883f 217 SUPERFAMILY SSF88697 19 212 4.47E-50 T 22-04-2016 IPR015947 PUA-like domain RPIC12D_RS15215 e71c3a3beae76a1bb2704f18e656f008 264 Pfam PF12395 Protein of unknown function 150 254 1.0E-28 T 22-04-2016 IPR022123 Protein of unknown function DUF3658 RPIC12D_RS15215 e71c3a3beae76a1bb2704f18e656f008 264 Pfam PF08874 Domain of unknown function (DUF1835) 4 119 8.3E-27 T 22-04-2016 IPR014973 Protein of unknown function DUF1835 RPIC12D_RS06355 d2f25a86078506cf8776edef155debab 205 SUPERFAMILY SSF52141 16 200 2.62E-50 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC12D_RS06355 d2f25a86078506cf8776edef155debab 205 Gene3D G3DSA:3.40.470.10 17 201 3.4E-42 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC12D_RS06355 d2f25a86078506cf8776edef155debab 205 Pfam PF03167 Uracil DNA glycosylase superfamily 41 196 6.3E-24 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC12D_RS06355 d2f25a86078506cf8776edef155debab 205 PANTHER PTHR42160 8 197 1.7E-68 T 22-04-2016 RPIC12D_RS06355 d2f25a86078506cf8776edef155debab 205 PANTHER PTHR42160:SF1 8 197 1.7E-68 T 22-04-2016 RPIC12D_RS06355 d2f25a86078506cf8776edef155debab 205 SMART SM00987 37 197 7.3E-30 T 22-04-2016 RPIC12D_RS06355 d2f25a86078506cf8776edef155debab 205 SMART SM00986 37 197 7.3E-30 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC12D_RS04275 bf857d857be348d2c2794a94bc23d4b8 104 SUPERFAMILY SSF47781 22 81 1.67E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RPIC12D_RS04275 bf857d857be348d2c2794a94bc23d4b8 104 PANTHER PTHR21180 20 81 2.0E-12 T 22-04-2016 RPIC12D_RS04275 bf857d857be348d2c2794a94bc23d4b8 104 Pfam PF12836 Helix-hairpin-helix motif 22 79 2.0E-15 T 22-04-2016 RPIC12D_RS04275 bf857d857be348d2c2794a94bc23d4b8 104 Gene3D G3DSA:1.10.150.280 19 82 1.9E-18 T 22-04-2016 RPIC12D_RS07605 94582c057ca7a4caf0b960244fbc4f3b 180 SUPERFAMILY SSF56935 1 180 1.53E-33 T 22-04-2016 RPIC12D_RS07605 94582c057ca7a4caf0b960244fbc4f3b 180 Pfam PF13609 Gram-negative porin 7 152 4.8E-18 T 22-04-2016 RPIC12D_RS07605 94582c057ca7a4caf0b960244fbc4f3b 180 Gene3D G3DSA:2.40.160.10 1 180 1.5E-36 T 22-04-2016 IPR023614 Porin domain RPIC12D_RS15015 ae03d5bc2a103cbe655f7ce890d075b1 433 Pfam PF00083 Sugar (and other) transporter 17 220 5.7E-24 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RPIC12D_RS15015 ae03d5bc2a103cbe655f7ce890d075b1 433 Gene3D G3DSA:1.20.1250.20 235 419 5.7E-23 T 22-04-2016 RPIC12D_RS15015 ae03d5bc2a103cbe655f7ce890d075b1 433 Gene3D G3DSA:1.20.1250.20 10 219 4.3E-27 T 22-04-2016 RPIC12D_RS15015 ae03d5bc2a103cbe655f7ce890d075b1 433 ProSitePatterns PS00216 Sugar transport proteins signature 1. 291 308 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS15015 ae03d5bc2a103cbe655f7ce890d075b1 433 PANTHER PTHR23508 7 422 2.5E-270 T 22-04-2016 RPIC12D_RS15015 ae03d5bc2a103cbe655f7ce890d075b1 433 Pfam PF07690 Major Facilitator Superfamily 275 417 4.4E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS15015 ae03d5bc2a103cbe655f7ce890d075b1 433 PANTHER PTHR23508:SF14 7 422 2.5E-270 T 22-04-2016 RPIC12D_RS15015 ae03d5bc2a103cbe655f7ce890d075b1 433 SUPERFAMILY SSF103473 10 422 7.59E-68 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS15015 ae03d5bc2a103cbe655f7ce890d075b1 433 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS01785 2185b3cfd4337e4ae0751a85517ccaee 248 PANTHER PTHR15822 3 246 2.0E-49 T 22-04-2016 RPIC12D_RS01785 2185b3cfd4337e4ae0751a85517ccaee 248 SUPERFAMILY SSF56219 2 245 1.7E-49 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC12D_RS01785 2185b3cfd4337e4ae0751a85517ccaee 248 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 224 1.6E-18 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC12D_RS01785 2185b3cfd4337e4ae0751a85517ccaee 248 PANTHER PTHR15822:SF7 3 246 2.0E-49 T 22-04-2016 RPIC12D_RS01785 2185b3cfd4337e4ae0751a85517ccaee 248 Gene3D G3DSA:3.60.10.10 4 245 9.4E-18 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC12D_RS15680 119c49f9fad8fe46ab3e369aeee9808b 156 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 9 156 1.0E-49 T 22-04-2016 IPR016568 Sulphur oxidation, SoxY RPIC12D_RS15680 119c49f9fad8fe46ab3e369aeee9808b 156 Pfam PF13501 Sulfur oxidation protein SoxY 53 154 1.2E-31 T 22-04-2016 IPR032711 Ig-like SoxY domain RPIC12D_RS15680 119c49f9fad8fe46ab3e369aeee9808b 156 PIRSF PIRSF010312 3 156 4.6E-54 T 22-04-2016 IPR016568 Sulphur oxidation, SoxY RPIC12D_RS10910 e96a9b594bf8c7204f5e80925b6a10b6 201 SUPERFAMILY SSF47240 57 199 1.03E-37 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC12D_RS10910 e96a9b594bf8c7204f5e80925b6a10b6 201 Gene3D G3DSA:1.20.1260.10 55 194 9.0E-18 T 22-04-2016 IPR012347 Ferritin-related RPIC12D_RS10910 e96a9b594bf8c7204f5e80925b6a10b6 201 Pfam PF13668 Ferritin-like domain 58 191 8.7E-34 T 22-04-2016 RPIC12D_RS00410 3950ceb2cfa63dc5afea4fafa9b677e8 398 Pfam PF07690 Major Facilitator Superfamily 8 323 1.4E-36 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS00410 3950ceb2cfa63dc5afea4fafa9b677e8 398 PANTHER PTHR23501:SF4 1 376 5.5E-87 T 22-04-2016 RPIC12D_RS00410 3950ceb2cfa63dc5afea4fafa9b677e8 398 Gene3D G3DSA:1.20.1250.20 4 181 6.9E-29 T 22-04-2016 RPIC12D_RS00410 3950ceb2cfa63dc5afea4fafa9b677e8 398 PANTHER PTHR23501 1 376 5.5E-87 T 22-04-2016 RPIC12D_RS00410 3950ceb2cfa63dc5afea4fafa9b677e8 398 SUPERFAMILY SSF103473 4 383 5.89E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS00410 3950ceb2cfa63dc5afea4fafa9b677e8 398 Gene3D G3DSA:1.20.1250.20 202 379 2.7E-10 T 22-04-2016 RPIC12D_RS06140 f932adfd4804d81ba47c0b8cce5939f3 369 SUPERFAMILY SSF52096 268 338 6.17E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS06140 f932adfd4804d81ba47c0b8cce5939f3 369 SUPERFAMILY SSF52096 16 203 6.17E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS06140 f932adfd4804d81ba47c0b8cce5939f3 369 Gene3D G3DSA:3.90.226.10 16 208 5.4E-56 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS06140 f932adfd4804d81ba47c0b8cce5939f3 369 PANTHER PTHR11941:SF53 259 336 6.9E-110 T 22-04-2016 RPIC12D_RS06140 f932adfd4804d81ba47c0b8cce5939f3 369 PANTHER PTHR11941:SF53 2 198 6.9E-110 T 22-04-2016 RPIC12D_RS06140 f932adfd4804d81ba47c0b8cce5939f3 369 Gene3D G3DSA:1.10.12.10 279 337 1.3E-7 T 22-04-2016 IPR014748 Crontonase, C-terminal RPIC12D_RS06140 f932adfd4804d81ba47c0b8cce5939f3 369 Pfam PF16113 Enoyl-CoA hydratase/isomerase 25 353 2.9E-125 T 22-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 RPIC12D_RS06140 f932adfd4804d81ba47c0b8cce5939f3 369 PANTHER PTHR11941 259 336 6.9E-110 T 22-04-2016 RPIC12D_RS06140 f932adfd4804d81ba47c0b8cce5939f3 369 PANTHER PTHR11941 2 198 6.9E-110 T 22-04-2016 RPIC12D_RS01455 4197194b5b77b2fde01c031321cb6d7e 195 Gene3D G3DSA:2.60.450.10 26 176 1.2E-33 T 22-04-2016 RPIC12D_RS01455 4197194b5b77b2fde01c031321cb6d7e 195 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 25 179 3.3E-35 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 RPIC12D_RS01455 4197194b5b77b2fde01c031321cb6d7e 195 Pfam PF03968 OstA-like protein 36 154 1.7E-27 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal RPIC12D_RS01455 4197194b5b77b2fde01c031321cb6d7e 195 PANTHER PTHR36504 1 195 3.0E-15 T 22-04-2016 RPIC12D_RS01455 4197194b5b77b2fde01c031321cb6d7e 195 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 5 180 25.255 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 RPIC12D_RS04365 5cefedebc6eb80250304e5bfb7eb3cf4 84 PANTHER PTHR12919 1 78 1.6E-36 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS04365 5cefedebc6eb80250304e5bfb7eb3cf4 84 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 2.0E-25 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS04365 5cefedebc6eb80250304e5bfb7eb3cf4 84 SUPERFAMILY SSF54565 1 77 1.31E-27 T 22-04-2016 IPR023803 Ribosomal protein S16 domain RPIC12D_RS04365 5cefedebc6eb80250304e5bfb7eb3cf4 84 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.638 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS04365 5cefedebc6eb80250304e5bfb7eb3cf4 84 Gene3D G3DSA:3.30.1320.10 1 78 4.7E-31 T 22-04-2016 IPR023803 Ribosomal protein S16 domain RPIC12D_RS04365 5cefedebc6eb80250304e5bfb7eb3cf4 84 Pfam PF00886 Ribosomal protein S16 8 68 1.3E-22 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS11815 c157f401161d395ab7c2e983aaef8d44 518 Pfam PF07690 Major Facilitator Superfamily 31 412 1.9E-26 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS11815 c157f401161d395ab7c2e983aaef8d44 518 Gene3D G3DSA:1.20.1250.20 493 512 3.2E-5 T 22-04-2016 RPIC12D_RS11815 c157f401161d395ab7c2e983aaef8d44 518 Gene3D G3DSA:1.20.1250.20 283 447 3.2E-5 T 22-04-2016 RPIC12D_RS11815 c157f401161d395ab7c2e983aaef8d44 518 SUPERFAMILY SSF103473 272 446 2.35E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS11815 c157f401161d395ab7c2e983aaef8d44 518 SUPERFAMILY SSF103473 492 512 2.35E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS11815 c157f401161d395ab7c2e983aaef8d44 518 SUPERFAMILY SSF103473 28 214 2.35E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS11815 c157f401161d395ab7c2e983aaef8d44 518 PANTHER PTHR23501 18 511 1.0E-41 T 22-04-2016 RPIC12D_RS11815 c157f401161d395ab7c2e983aaef8d44 518 Gene3D G3DSA:1.20.1250.20 28 208 1.6E-19 T 22-04-2016 RPIC12D_RS14525 23e1a11682d5c8823e58e2eeb100db90 181 PIRSF PIRSF016481 9 180 3.9E-40 T 22-04-2016 IPR007446 Pilus assembly protein PilP RPIC12D_RS14525 23e1a11682d5c8823e58e2eeb100db90 181 Pfam PF04351 Pilus assembly protein, PilP 36 175 8.7E-43 T 22-04-2016 IPR007446 Pilus assembly protein PilP RPIC12D_RS12945 61c0d3faf08e3d2a4f52d4c0eaca3654 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 323 3.2E-44 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS12945 61c0d3faf08e3d2a4f52d4c0eaca3654 335 PANTHER PTHR32196 1 335 8.5E-125 T 22-04-2016 RPIC12D_RS12945 61c0d3faf08e3d2a4f52d4c0eaca3654 335 PANTHER PTHR32196:SF37 1 335 8.5E-125 T 22-04-2016 RPIC12D_RS12215 b33e06535954606a0d662be02b880fa4 167 Gene3D G3DSA:4.10.1020.10 67 136 7.3E-29 T 22-04-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain RPIC12D_RS12215 b33e06535954606a0d662be02b880fa4 167 PIRSF PIRSF006105 1 164 5.9E-54 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB RPIC12D_RS12215 b33e06535954606a0d662be02b880fa4 167 PANTHER PTHR38604:SF1 1 156 5.1E-50 T 22-04-2016 RPIC12D_RS12215 b33e06535954606a0d662be02b880fa4 167 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 25 149 1.6E-48 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB RPIC12D_RS12215 b33e06535954606a0d662be02b880fa4 167 PANTHER PTHR38604 1 156 5.1E-50 T 22-04-2016 RPIC12D_RS12215 b33e06535954606a0d662be02b880fa4 167 SUPERFAMILY SSF48695 32 157 1.95E-41 T 22-04-2016 IPR011031 Multihaem cytochrome RPIC12D_RS16460 ad4b38efa5facf4e53002076c8505ce8 179 Pfam PF13628 Domain of unknown function (DUF4142) 38 174 1.4E-47 T 22-04-2016 IPR025419 Domain of unknown function DUF4142 RPIC12D_RS16460 ad4b38efa5facf4e53002076c8505ce8 179 PANTHER PTHR38593:SF2 1 177 8.3E-23 T 22-04-2016 RPIC12D_RS16460 ad4b38efa5facf4e53002076c8505ce8 179 PANTHER PTHR38593 1 177 8.3E-23 T 22-04-2016 RPIC12D_RS16460 ad4b38efa5facf4e53002076c8505ce8 179 Gene3D G3DSA:1.20.1260.10 35 158 1.3E-7 T 22-04-2016 IPR012347 Ferritin-related RPIC12D_RS25560 6af491a07f7cca24f8d30c28de84ebef 100 SUPERFAMILY SSF55347 5 88 1.96E-15 T 22-04-2016 RPIC12D_RS25560 6af491a07f7cca24f8d30c28de84ebef 100 Gene3D G3DSA:3.30.360.10 6 91 3.3E-16 T 22-04-2016 RPIC12D_RS13050 dbedcb83afdb8c78b45a32651c715019 166 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 157 1.5E-46 T 22-04-2016 IPR008136 CinA, C-terminal RPIC12D_RS13050 dbedcb83afdb8c78b45a32651c715019 166 Pfam PF02464 Competence-damaged protein 9 160 4.0E-61 T 22-04-2016 IPR008136 CinA, C-terminal RPIC12D_RS13050 dbedcb83afdb8c78b45a32651c715019 166 Gene3D G3DSA:3.90.950.20 7 163 9.0E-61 T 22-04-2016 IPR008136 CinA, C-terminal RPIC12D_RS13050 dbedcb83afdb8c78b45a32651c715019 166 SUPERFAMILY SSF142433 7 161 2.88E-57 T 22-04-2016 IPR008136 CinA, C-terminal RPIC12D_RS13050 dbedcb83afdb8c78b45a32651c715019 166 PANTHER PTHR13939 7 165 1.9E-65 T 22-04-2016 RPIC12D_RS09480 aa970d83b5ab19cb090aca201b480397 163 SUPERFAMILY SSF54862 37 146 3.52E-26 T 22-04-2016 RPIC12D_RS09480 aa970d83b5ab19cb090aca201b480397 163 PANTHER PTHR10849 4 163 4.9E-87 T 22-04-2016 RPIC12D_RS09480 aa970d83b5ab19cb090aca201b480397 163 PANTHER PTHR10849:SF20 4 163 4.9E-87 T 22-04-2016 RPIC12D_RS09480 aa970d83b5ab19cb090aca201b480397 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC12D_RS09480 aa970d83b5ab19cb090aca201b480397 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC12D_RS09480 aa970d83b5ab19cb090aca201b480397 163 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 11 160 28.173 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 RPIC12D_RS09480 aa970d83b5ab19cb090aca201b480397 163 Gene3D G3DSA:1.10.1060.10 18 129 2.0E-22 T 22-04-2016 RPIC12D_RS09480 aa970d83b5ab19cb090aca201b480397 163 Pfam PF12838 4Fe-4S dicluster domain 63 117 1.2E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC12D_RS09480 aa970d83b5ab19cb090aca201b480397 163 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 141 4.7E-46 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 RPIC12D_RS02875 7d10581635e5e654ce5bd25d7fff0144 627 Pfam PF02719 Polysaccharide biosynthesis protein 284 576 1.7E-124 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RPIC12D_RS02875 7d10581635e5e654ce5bd25d7fff0144 627 PANTHER PTHR10366:SF256 283 566 5.5E-118 T 22-04-2016 RPIC12D_RS02875 7d10581635e5e654ce5bd25d7fff0144 627 Gene3D G3DSA:3.40.50.720 143 220 1.4E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02875 7d10581635e5e654ce5bd25d7fff0144 627 Gene3D G3DSA:3.40.50.720 284 529 5.3E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02875 7d10581635e5e654ce5bd25d7fff0144 627 Pfam PF13727 CoA-binding domain 66 239 8.5E-15 T 22-04-2016 RPIC12D_RS02875 7d10581635e5e654ce5bd25d7fff0144 627 PANTHER PTHR10366 283 566 5.5E-118 T 22-04-2016 RPIC12D_RS02875 7d10581635e5e654ce5bd25d7fff0144 627 SUPERFAMILY SSF53335 111 326 3.65E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS02875 7d10581635e5e654ce5bd25d7fff0144 627 SUPERFAMILY SSF51735 282 556 1.06E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS16220 f93c4a75faee550c7f4ad4b5f0b86d7c 267 SUPERFAMILY SSF81901 110 250 5.58E-29 T 22-04-2016 RPIC12D_RS16220 f93c4a75faee550c7f4ad4b5f0b86d7c 267 Gene3D G3DSA:1.25.40.10 66 183 1.0E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS16220 f93c4a75faee550c7f4ad4b5f0b86d7c 267 Gene3D G3DSA:1.25.40.10 184 259 7.8E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS16220 f93c4a75faee550c7f4ad4b5f0b86d7c 267 PANTHER PTHR11102 68 246 4.3E-37 T 22-04-2016 RPIC12D_RS16220 f93c4a75faee550c7f4ad4b5f0b86d7c 267 SMART SM00671 116 152 1.0E-6 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS16220 f93c4a75faee550c7f4ad4b5f0b86d7c 267 SMART SM00671 153 188 1.5E-6 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS16220 f93c4a75faee550c7f4ad4b5f0b86d7c 267 SMART SM00671 189 224 5.7E-7 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS16220 f93c4a75faee550c7f4ad4b5f0b86d7c 267 Pfam PF08238 Sel1 repeat 153 186 1.4E-5 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS16220 f93c4a75faee550c7f4ad4b5f0b86d7c 267 Pfam PF08238 Sel1 repeat 116 152 4.5E-5 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS16220 f93c4a75faee550c7f4ad4b5f0b86d7c 267 Pfam PF08238 Sel1 repeat 101 113 160.0 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS16220 f93c4a75faee550c7f4ad4b5f0b86d7c 267 Pfam PF08238 Sel1 repeat 228 246 17.0 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS16220 f93c4a75faee550c7f4ad4b5f0b86d7c 267 Pfam PF08238 Sel1 repeat 189 222 4.3E-6 T 22-04-2016 IPR006597 Sel1-like repeat RPIC12D_RS23685 c468af1b6c973051d965f05ad0c6cb02 444 Gene3D G3DSA:3.40.50.300 6 129 1.0E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS23685 c468af1b6c973051d965f05ad0c6cb02 444 PANTHER PTHR23408 198 421 4.9E-52 T 22-04-2016 RPIC12D_RS23685 c468af1b6c973051d965f05ad0c6cb02 444 SUPERFAMILY SSF51703 230 420 2.2E-36 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 RPIC12D_RS23685 c468af1b6c973051d965f05ad0c6cb02 444 PANTHER PTHR23408:SF1 198 421 4.9E-52 T 22-04-2016 RPIC12D_RS23685 c468af1b6c973051d965f05ad0c6cb02 444 SUPERFAMILY SSF52540 4 181 3.59E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS23685 c468af1b6c973051d965f05ad0c6cb02 444 Pfam PF03308 ArgK protein 8 129 6.4E-17 T 22-04-2016 RPIC12D_RS23685 c468af1b6c973051d965f05ad0c6cb02 444 Gene3D G3DSA:3.20.20.240 269 420 3.0E-44 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 RPIC12D_RS23685 c468af1b6c973051d965f05ad0c6cb02 444 Pfam PF01642 Methylmalonyl-CoA mutase 276 420 2.0E-29 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 RPIC12D_RS06910 a5dabd14e1d20a8a5aa1214b7c917b55 406 SUPERFAMILY SSF46785 329 385 4.87E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS06910 a5dabd14e1d20a8a5aa1214b7c917b55 406 Gene3D G3DSA:1.10.10.10 335 372 5.5E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS05185 ffcc17055b4f2f4fd6eae05a9e23c192 140 SUPERFAMILY SSF53098 7 140 1.04E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS05185 ffcc17055b4f2f4fd6eae05a9e23c192 140 PANTHER PTHR32552:SF26 1 139 4.2E-62 T 22-04-2016 RPIC12D_RS05185 ffcc17055b4f2f4fd6eae05a9e23c192 140 Pfam PF13683 Integrase core domain 78 140 8.4E-29 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC12D_RS05185 ffcc17055b4f2f4fd6eae05a9e23c192 140 PANTHER PTHR32552 1 139 4.2E-62 T 22-04-2016 RPIC12D_RS05185 ffcc17055b4f2f4fd6eae05a9e23c192 140 Gene3D G3DSA:3.30.420.10 7 140 1.4E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS01515 7390d7c07bc749161b5c3007eb64d4cb 185 Gene3D G3DSA:2.40.50.140 1 121 4.2E-57 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS01515 7390d7c07bc749161b5c3007eb64d4cb 185 Gene3D G3DSA:2.40.50.140 165 185 4.2E-57 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS01515 7390d7c07bc749161b5c3007eb64d4cb 185 SUPERFAMILY SSF50249 3 185 4.0E-58 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS01515 7390d7c07bc749161b5c3007eb64d4cb 185 Hamap MF_00984 Single-stranded DNA-binding protein. 4 111 37.8 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RPIC12D_RS01515 7390d7c07bc749161b5c3007eb64d4cb 185 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 185 3.5E-52 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RPIC12D_RS01515 7390d7c07bc749161b5c3007eb64d4cb 185 Pfam PF00436 Single-strand binding protein family 4 107 1.6E-40 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 RPIC12D_RS01515 7390d7c07bc749161b5c3007eb64d4cb 185 PANTHER PTHR10302 3 185 1.4E-48 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RPIC12D_RS05955 7329bbd10709a1fb16ded2acb359592f 297 Gene3D G3DSA:3.40.50.1000 194 260 1.3E-20 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS05955 7329bbd10709a1fb16ded2acb359592f 297 Gene3D G3DSA:3.40.50.1000 39 107 1.3E-20 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS05955 7329bbd10709a1fb16ded2acb359592f 297 SUPERFAMILY SSF56784 38 285 1.09E-30 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS05955 7329bbd10709a1fb16ded2acb359592f 297 Pfam PF08282 haloacid dehalogenase-like hydrolase 43 109 6.9E-10 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS05955 7329bbd10709a1fb16ded2acb359592f 297 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 43 251 5.6E-38 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 RPIC12D_RS11020 5ccd962ef68af9a1a4046a2520c5ee7c 1304 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 963 1304 1.8E-57 T 22-04-2016 IPR007452 Translocation and assembly module TamB RPIC12D_RS11020 5ccd962ef68af9a1a4046a2520c5ee7c 1304 PANTHER PTHR36985 12 1304 3.4E-68 T 22-04-2016 RPIC12D_RS03040 962220ff759b1db95354a72938ba7f51 370 Gene3D G3DSA:3.20.20.70 1 351 2.9E-124 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS03040 962220ff759b1db95354a72938ba7f51 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 334 5.2E-64 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RPIC12D_RS03040 962220ff759b1db95354a72938ba7f51 370 PANTHER PTHR22893:SF7 1 353 7.7E-151 T 22-04-2016 RPIC12D_RS03040 962220ff759b1db95354a72938ba7f51 370 SUPERFAMILY SSF51395 1 357 2.96E-113 T 22-04-2016 RPIC12D_RS03040 962220ff759b1db95354a72938ba7f51 370 PANTHER PTHR22893 1 353 7.7E-151 T 22-04-2016 RPIC12D_RS06370 798d7f9275a1e7cefa1fb294950f9483 173 PANTHER PTHR23404 23 164 8.9E-37 T 22-04-2016 RPIC12D_RS06370 798d7f9275a1e7cefa1fb294950f9483 173 PANTHER PTHR23404:SF2 23 164 8.9E-37 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS06370 798d7f9275a1e7cefa1fb294950f9483 173 SUPERFAMILY SSF54690 3 148 3.01E-51 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS06370 798d7f9275a1e7cefa1fb294950f9483 173 Gene3D G3DSA:3.90.1170.40 2 138 6.7E-57 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS06370 798d7f9275a1e7cefa1fb294950f9483 173 Pfam PF02391 MoaE protein 5 118 2.5E-37 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS11030 e7d88d0eac3badd410b9a13d31ae7109 62 Pfam PF11943 Protein of unknown function (DUF3460) 4 60 1.3E-28 T 22-04-2016 IPR021853 Protein of unknown function DUF3460 RPIC12D_RS09515 d4f6c6ed3f13402242f542debf5715ba 160 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 1.2E-22 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 RPIC12D_RS09515 d4f6c6ed3f13402242f542debf5715ba 160 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RPIC12D_RS09515 d4f6c6ed3f13402242f542debf5715ba 160 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.205 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RPIC12D_RS09515 d4f6c6ed3f13402242f542debf5715ba 160 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 5.2E-78 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RPIC12D_RS09515 d4f6c6ed3f13402242f542debf5715ba 160 Gene3D G3DSA:3.40.50.700 21 149 1.6E-32 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 RPIC12D_RS09515 d4f6c6ed3f13402242f542debf5715ba 160 PANTHER PTHR11995:SF19 11 156 8.4E-123 T 22-04-2016 RPIC12D_RS09515 d4f6c6ed3f13402242f542debf5715ba 160 SUPERFAMILY SSF56770 9 153 1.96E-67 T 22-04-2016 RPIC12D_RS09515 d4f6c6ed3f13402242f542debf5715ba 160 PANTHER PTHR11995 11 156 8.4E-123 T 22-04-2016 RPIC12D_RS05570 0b7e434ab04f87c4b135e5f9073359a9 350 PANTHER PTHR30465 1 345 1.1E-170 T 22-04-2016 RPIC12D_RS05570 0b7e434ab04f87c4b135e5f9073359a9 350 SUPERFAMILY SSF161098 111 327 5.36E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS05570 0b7e434ab04f87c4b135e5f9073359a9 350 Gene3D G3DSA:1.10.3720.10 113 333 1.2E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS05570 0b7e434ab04f87c4b135e5f9073359a9 350 PANTHER PTHR30465:SF66 1 345 1.1E-170 T 22-04-2016 RPIC12D_RS05570 0b7e434ab04f87c4b135e5f9073359a9 350 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 135 343 2.2E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS04050 c7c5accf1446f09acfbafc0372237763 150 Pfam PF09980 Predicted membrane protein (DUF2214) 4 149 3.2E-57 T 22-04-2016 IPR018706 Protein of unknown function DUF2214, membrane RPIC12D_RS18160 1d3fb2d635a092adbc58e1e80e864aee 120 SUPERFAMILY SSF103473 4 109 6.67E-16 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS18160 1d3fb2d635a092adbc58e1e80e864aee 120 Gene3D G3DSA:1.20.1250.20 5 110 1.3E-12 T 22-04-2016 RPIC12D_RS18160 1d3fb2d635a092adbc58e1e80e864aee 120 Pfam PF07690 Major Facilitator Superfamily 4 114 4.3E-14 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS14430 37bc14a43f65449bfd8b4c83a288916f 421 Gene3D G3DSA:3.65.10.10 21 223 3.7E-67 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RPIC12D_RS14430 37bc14a43f65449bfd8b4c83a288916f 421 Gene3D G3DSA:3.65.10.10 224 419 1.0E-57 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RPIC12D_RS14430 37bc14a43f65449bfd8b4c83a288916f 421 SUPERFAMILY SSF55205 1 420 7.36E-141 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RPIC12D_RS14430 37bc14a43f65449bfd8b4c83a288916f 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 409 5.2E-107 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RPIC12D_RS14430 37bc14a43f65449bfd8b4c83a288916f 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 46.553 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS14430 37bc14a43f65449bfd8b4c83a288916f 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 1.9E-173 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC12D_RS14430 37bc14a43f65449bfd8b4c83a288916f 421 PANTHER PTHR21090 1 421 2.6E-186 T 22-04-2016 RPIC12D_RS11065 8c792102e3ee186927356fdf84257fad 335 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 6 329 3.4E-102 T 22-04-2016 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443|UniPathway: UPA00148 RPIC12D_RS11065 8c792102e3ee186927356fdf84257fad 335 Pfam PF00155 Aminotransferase class I and II 57 283 2.5E-22 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC12D_RS11065 8c792102e3ee186927356fdf84257fad 335 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 195 208 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RPIC12D_RS11065 8c792102e3ee186927356fdf84257fad 335 SUPERFAMILY SSF53383 6 329 2.39E-50 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS11065 8c792102e3ee186927356fdf84257fad 335 Gene3D G3DSA:3.40.640.10 50 243 5.1E-42 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS11065 8c792102e3ee186927356fdf84257fad 335 PANTHER PTHR11751:SF3 8 335 2.2E-40 T 22-04-2016 RPIC12D_RS11065 8c792102e3ee186927356fdf84257fad 335 PANTHER PTHR11751 8 335 2.2E-40 T 22-04-2016 RPIC12D_RS13555 ceb820b392894ae9560d048405c0a2fc 67 PANTHER PTHR36150:SF1 1 56 1.9E-19 T 22-04-2016 RPIC12D_RS13555 ceb820b392894ae9560d048405c0a2fc 67 PANTHER PTHR36150 1 56 1.9E-19 T 22-04-2016 RPIC12D_RS13555 ceb820b392894ae9560d048405c0a2fc 67 Gene3D G3DSA:3.30.50.10 3 57 2.3E-25 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 RPIC12D_RS13555 ceb820b392894ae9560d048405c0a2fc 67 SUPERFAMILY SSF57716 3 61 2.85E-21 T 22-04-2016 RPIC12D_RS13555 ceb820b392894ae9560d048405c0a2fc 67 Pfam PF03884 Domain of unknown function (DUF329) 6 53 1.1E-24 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 RPIC12D_RS13555 ceb820b392894ae9560d048405c0a2fc 67 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 2 60 19.005 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 RPIC12D_RS16870 d438b12dbb63986817e2b456f19dd0b5 801 Pfam PF00905 Penicillin binding protein transpeptidase domain 283 623 3.8E-65 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RPIC12D_RS16870 d438b12dbb63986817e2b456f19dd0b5 801 SUPERFAMILY SSF56519 53 265 5.1E-47 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RPIC12D_RS16870 d438b12dbb63986817e2b456f19dd0b5 801 PANTHER PTHR30627 209 661 2.5E-218 T 22-04-2016 RPIC12D_RS16870 d438b12dbb63986817e2b456f19dd0b5 801 PANTHER PTHR30627 2 193 2.5E-218 T 22-04-2016 RPIC12D_RS16870 d438b12dbb63986817e2b456f19dd0b5 801 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 17 627 1.0E-237 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 RPIC12D_RS16870 d438b12dbb63986817e2b456f19dd0b5 801 PANTHER PTHR30627:SF2 209 661 2.5E-218 T 22-04-2016 RPIC12D_RS16870 d438b12dbb63986817e2b456f19dd0b5 801 PANTHER PTHR30627:SF2 2 193 2.5E-218 T 22-04-2016 RPIC12D_RS16870 d438b12dbb63986817e2b456f19dd0b5 801 SUPERFAMILY SSF56601 266 627 2.62E-101 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS16870 d438b12dbb63986817e2b456f19dd0b5 801 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 251 3.4E-43 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RPIC12D_RS16870 d438b12dbb63986817e2b456f19dd0b5 801 Gene3D G3DSA:3.40.710.10 265 627 3.1E-108 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS16870 d438b12dbb63986817e2b456f19dd0b5 801 Gene3D G3DSA:3.90.1310.10 128 264 1.3E-36 T 22-04-2016 RPIC12D_RS09530 f77a0a527c59959ebfdc488a03a84ac3 120 PRINTS PR01651 Protein-export SecG membrane protein signature 57 79 1.5E-35 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RPIC12D_RS09530 f77a0a527c59959ebfdc488a03a84ac3 120 PRINTS PR01651 Protein-export SecG membrane protein signature 26 40 1.5E-35 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RPIC12D_RS09530 f77a0a527c59959ebfdc488a03a84ac3 120 PRINTS PR01651 Protein-export SecG membrane protein signature 41 57 1.5E-35 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RPIC12D_RS09530 f77a0a527c59959ebfdc488a03a84ac3 120 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 1.5E-35 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RPIC12D_RS09530 f77a0a527c59959ebfdc488a03a84ac3 120 PANTHER PTHR34182 6 117 8.9E-23 T 22-04-2016 RPIC12D_RS09530 f77a0a527c59959ebfdc488a03a84ac3 120 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 76 2.9E-25 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RPIC12D_RS09530 f77a0a527c59959ebfdc488a03a84ac3 120 Pfam PF03840 Preprotein translocase SecG subunit 7 76 2.4E-20 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RPIC12D_RS00705 162644260ed18e613136ed404b376622 218 PANTHER PTHR35891 1 217 6.5E-44 T 22-04-2016 RPIC12D_RS00705 162644260ed18e613136ed404b376622 218 Gene3D G3DSA:3.40.30.10 24 212 4.2E-60 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS00705 162644260ed18e613136ed404b376622 218 SUPERFAMILY SSF52833 26 208 5.42E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS00705 162644260ed18e613136ed404b376622 218 ProSitePatterns PS00194 Thioredoxin family active site. 49 67 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RPIC12D_RS00705 162644260ed18e613136ed404b376622 218 Pfam PF01323 DSBA-like thioredoxin domain 115 195 4.8E-11 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RPIC12D_RS00705 162644260ed18e613136ed404b376622 218 PANTHER PTHR35891:SF2 1 217 6.5E-44 T 22-04-2016 RPIC12D_RS00705 162644260ed18e613136ed404b376622 218 PIRSF PIRSF001488 1 217 1.1E-48 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL RPIC12D_RS03355 716d28c65339ee4f3505dca1fb468e6c 719 Pfam PF12696 TraM recognition site of TraD and TraG 508 635 3.3E-10 T 22-04-2016 IPR032689 TraD/TraG, TraM recognition site RPIC12D_RS03355 716d28c65339ee4f3505dca1fb468e6c 719 Gene3D G3DSA:3.40.50.300 444 656 1.9E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03355 716d28c65339ee4f3505dca1fb468e6c 719 Gene3D G3DSA:3.40.50.300 167 267 1.9E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03355 716d28c65339ee4f3505dca1fb468e6c 719 SUPERFAMILY SSF52540 398 658 7.44E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03355 716d28c65339ee4f3505dca1fb468e6c 719 SUPERFAMILY SSF52540 153 331 7.44E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03355 716d28c65339ee4f3505dca1fb468e6c 719 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 656 5.0E-262 T 22-04-2016 IPR022458 Conjugative coupling factor TraG/TraD RPIC12D_RS03355 716d28c65339ee4f3505dca1fb468e6c 719 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 656 0.0 T 22-04-2016 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 RPIC12D_RS07400 c21a0fe58ad44ed0a7bd91fdaf2f807f 326 SUPERFAMILY SSF53474 30 320 1.26E-68 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS07400 c21a0fe58ad44ed0a7bd91fdaf2f807f 326 PANTHER PTHR23024:SF24 54 326 3.3E-84 T 22-04-2016 RPIC12D_RS07400 c21a0fe58ad44ed0a7bd91fdaf2f807f 326 PANTHER PTHR23024 54 326 3.3E-84 T 22-04-2016 RPIC12D_RS07400 c21a0fe58ad44ed0a7bd91fdaf2f807f 326 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 86 102 - T 22-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 RPIC12D_RS07400 c21a0fe58ad44ed0a7bd91fdaf2f807f 326 Gene3D G3DSA:3.40.50.1820 3 320 2.1E-90 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS07400 c21a0fe58ad44ed0a7bd91fdaf2f807f 326 Pfam PF07859 alpha/beta hydrolase fold 86 295 8.2E-77 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RPIC12D_RS07705 0c9d1a31a28e8f2af733a8bddb483d9e 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.8E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS07705 0c9d1a31a28e8f2af733a8bddb483d9e 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.8E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS07705 0c9d1a31a28e8f2af733a8bddb483d9e 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.8E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS07705 0c9d1a31a28e8f2af733a8bddb483d9e 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RPIC12D_RS07705 0c9d1a31a28e8f2af733a8bddb483d9e 90 Gene3D G3DSA:4.10.520.10 1 90 1.1E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC12D_RS07705 0c9d1a31a28e8f2af733a8bddb483d9e 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 8.9E-32 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS07705 0c9d1a31a28e8f2af733a8bddb483d9e 90 PANTHER PTHR33175 1 90 3.2E-36 T 22-04-2016 RPIC12D_RS07705 0c9d1a31a28e8f2af733a8bddb483d9e 90 SUPERFAMILY SSF47729 1 90 1.91E-30 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC12D_RS07705 0c9d1a31a28e8f2af733a8bddb483d9e 90 SMART SM00411 1 90 1.8E-35 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC12D_RS00940 d6e4af0ecf53d59d74c54e94e3c2cbf7 215 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 49 128 4.9E-8 T 22-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 RPIC12D_RS00940 d6e4af0ecf53d59d74c54e94e3c2cbf7 215 PANTHER PTHR12277:SF79 1 207 2.8E-34 T 22-04-2016 RPIC12D_RS00940 d6e4af0ecf53d59d74c54e94e3c2cbf7 215 SUPERFAMILY SSF53474 2 208 6.46E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS00940 d6e4af0ecf53d59d74c54e94e3c2cbf7 215 Gene3D G3DSA:3.40.50.1820 10 209 1.7E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS00940 d6e4af0ecf53d59d74c54e94e3c2cbf7 215 PANTHER PTHR12277 1 207 2.8E-34 T 22-04-2016 RPIC12D_RS07755 dd3d2d1562bcc5d4796dc6a7ef865878 298 Pfam PF03466 LysR substrate binding domain 87 292 2.4E-40 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS07755 dd3d2d1562bcc5d4796dc6a7ef865878 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.3E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07755 dd3d2d1562bcc5d4796dc6a7ef865878 298 SUPERFAMILY SSF46785 1 84 7.95E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07755 dd3d2d1562bcc5d4796dc6a7ef865878 298 PANTHER PTHR30346:SF4 1 296 2.3E-112 T 22-04-2016 RPIC12D_RS07755 dd3d2d1562bcc5d4796dc6a7ef865878 298 Gene3D G3DSA:3.40.190.10 89 174 7.8E-31 T 22-04-2016 RPIC12D_RS07755 dd3d2d1562bcc5d4796dc6a7ef865878 298 SUPERFAMILY SSF53850 88 295 7.6E-38 T 22-04-2016 RPIC12D_RS07755 dd3d2d1562bcc5d4796dc6a7ef865878 298 Gene3D G3DSA:3.40.190.10 175 263 4.7E-33 T 22-04-2016 RPIC12D_RS07755 dd3d2d1562bcc5d4796dc6a7ef865878 298 Gene3D G3DSA:1.10.10.10 1 83 1.6E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07755 dd3d2d1562bcc5d4796dc6a7ef865878 298 PANTHER PTHR30346 1 296 2.3E-112 T 22-04-2016 RPIC12D_RS07755 dd3d2d1562bcc5d4796dc6a7ef865878 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07755 dd3d2d1562bcc5d4796dc6a7ef865878 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07755 dd3d2d1562bcc5d4796dc6a7ef865878 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS07295 a71402e3663f9465b9c3d83a405887f5 84 SUPERFAMILY SSF52218 2 76 7.53E-5 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC12D_RS07295 a71402e3663f9465b9c3d83a405887f5 84 Gene3D G3DSA:3.40.50.360 2 75 2.3E-8 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC12D_RS07295 a71402e3663f9465b9c3d83a405887f5 84 Pfam PF02525 Flavodoxin-like fold 2 70 2.8E-4 T 22-04-2016 IPR003680 Flavodoxin-like fold RPIC12D_RS01730 c015b6b97f5aa8c031ef44bf5d0af097 243 PANTHER PTHR10108:SF864 4 240 4.7E-134 T 22-04-2016 RPIC12D_RS01730 c015b6b97f5aa8c031ef44bf5d0af097 243 Gene3D G3DSA:3.40.50.150 19 236 8.8E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS01730 c015b6b97f5aa8c031ef44bf5d0af097 243 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 151 165 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RPIC12D_RS01730 c015b6b97f5aa8c031ef44bf5d0af097 243 PANTHER PTHR10108 4 240 4.7E-134 T 22-04-2016 RPIC12D_RS01730 c015b6b97f5aa8c031ef44bf5d0af097 243 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 240 9.0E-85 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RPIC12D_RS01730 c015b6b97f5aa8c031ef44bf5d0af097 243 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 31 46 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RPIC12D_RS01730 c015b6b97f5aa8c031ef44bf5d0af097 243 SUPERFAMILY SSF53335 1 233 2.68E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS01730 c015b6b97f5aa8c031ef44bf5d0af097 243 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 11 242 35.588 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RPIC12D_RS01730 c015b6b97f5aa8c031ef44bf5d0af097 243 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 20 241 1.8E-73 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RPIC12D_RS09545 a7801da38ee4641bef99f489867a7261 317 SUPERFAMILY SSF56784 8 242 4.03E-12 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS10795 e741b0a7e3f18f55e54b5dc3641a0ec2 319 Gene3D G3DSA:3.40.800.10 10 312 1.3E-129 T 22-04-2016 IPR023696 Ureohydrolase domain RPIC12D_RS10795 e741b0a7e3f18f55e54b5dc3641a0ec2 319 Pfam PF00491 Arginase family 38 309 6.7E-92 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS10795 e741b0a7e3f18f55e54b5dc3641a0ec2 319 SUPERFAMILY SSF52768 16 311 9.36E-103 T 22-04-2016 RPIC12D_RS10795 e741b0a7e3f18f55e54b5dc3641a0ec2 319 ProSitePatterns PS01053 Arginase family signature. 240 261 - T 22-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 RPIC12D_RS10795 e741b0a7e3f18f55e54b5dc3641a0ec2 319 PANTHER PTHR11358 1 318 2.1E-194 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS10795 e741b0a7e3f18f55e54b5dc3641a0ec2 319 PRINTS PR00116 Arginase signature 124 139 2.8E-13 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS10795 e741b0a7e3f18f55e54b5dc3641a0ec2 319 PRINTS PR00116 Arginase signature 237 266 2.8E-13 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS10795 e741b0a7e3f18f55e54b5dc3641a0ec2 319 TIGRFAM TIGR01230 agmatinase: agmatinase 35 310 1.5E-63 T 22-04-2016 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 RPIC12D_RS10795 e741b0a7e3f18f55e54b5dc3641a0ec2 319 PANTHER PTHR11358:SF27 1 318 2.1E-194 T 22-04-2016 RPIC12D_RS10795 e741b0a7e3f18f55e54b5dc3641a0ec2 319 PIRSF PIRSF036979 15 315 1.3E-102 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS00700 dba43555f502158b187a3eec666eb7d8 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 9.7E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00700 dba43555f502158b187a3eec666eb7d8 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 9.7E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00700 dba43555f502158b187a3eec666eb7d8 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.7E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00700 dba43555f502158b187a3eec666eb7d8 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 9.7E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00700 dba43555f502158b187a3eec666eb7d8 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 9.7E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00700 dba43555f502158b187a3eec666eb7d8 266 PANTHER PTHR24322 7 142 4.2E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00700 dba43555f502158b187a3eec666eb7d8 266 PANTHER PTHR24322 158 190 4.2E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00700 dba43555f502158b187a3eec666eb7d8 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.2E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00700 dba43555f502158b187a3eec666eb7d8 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.2E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00700 dba43555f502158b187a3eec666eb7d8 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.2E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00700 dba43555f502158b187a3eec666eb7d8 266 SUPERFAMILY SSF51735 4 254 2.14E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS00700 dba43555f502158b187a3eec666eb7d8 266 Gene3D G3DSA:3.40.50.720 3 246 1.2E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS00700 dba43555f502158b187a3eec666eb7d8 266 Pfam PF00106 short chain dehydrogenase 4 198 1.5E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS11560 0c8298b783e0d387cb63cef109bb7efb 619 PANTHER PTHR21000 411 619 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS11560 0c8298b783e0d387cb63cef109bb7efb 619 PANTHER PTHR21000 1 376 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS11560 0c8298b783e0d387cb63cef109bb7efb 619 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 613 44.686 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS11560 0c8298b783e0d387cb63cef109bb7efb 619 PANTHER PTHR21000:SF11 411 619 0.0 T 22-04-2016 RPIC12D_RS11560 0c8298b783e0d387cb63cef109bb7efb 619 PANTHER PTHR21000:SF11 1 376 0.0 T 22-04-2016 RPIC12D_RS11560 0c8298b783e0d387cb63cef109bb7efb 619 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS11560 0c8298b783e0d387cb63cef109bb7efb 619 SUPERFAMILY SSF143975 4 425 3.92E-136 T 22-04-2016 RPIC12D_RS11560 0c8298b783e0d387cb63cef109bb7efb 619 Pfam PF00920 Dehydratase family 34 610 9.2E-220 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS11560 0c8298b783e0d387cb63cef109bb7efb 619 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 613 1.5E-256 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS11560 0c8298b783e0d387cb63cef109bb7efb 619 SUPERFAMILY SSF52016 426 614 1.8E-61 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RPIC12D_RS11560 0c8298b783e0d387cb63cef109bb7efb 619 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 514 525 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS04725 1d5713bff81d47d57a6cb51bbc23010c 526 SUPERFAMILY SSF52540 269 488 3.88E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04725 1d5713bff81d47d57a6cb51bbc23010c 526 Pfam PF00005 ABC transporter 26 175 1.6E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS04725 1d5713bff81d47d57a6cb51bbc23010c 526 Pfam PF00005 ABC transporter 281 436 2.8E-16 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS04725 1d5713bff81d47d57a6cb51bbc23010c 526 SUPERFAMILY SSF52540 10 236 1.55E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04725 1d5713bff81d47d57a6cb51bbc23010c 526 SMART SM00382 35 223 2.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS04725 1d5713bff81d47d57a6cb51bbc23010c 526 SMART SM00382 289 494 1.3E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS04725 1d5713bff81d47d57a6cb51bbc23010c 526 Gene3D G3DSA:3.40.50.300 276 489 5.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04725 1d5713bff81d47d57a6cb51bbc23010c 526 Gene3D G3DSA:3.40.50.300 10 248 2.8E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS04725 1d5713bff81d47d57a6cb51bbc23010c 526 PANTHER PTHR24220 13 391 1.1E-148 T 22-04-2016 RPIC12D_RS04725 1d5713bff81d47d57a6cb51bbc23010c 526 PANTHER PTHR24220:SF308 13 391 1.1E-148 T 22-04-2016 RPIC12D_RS04725 1d5713bff81d47d57a6cb51bbc23010c 526 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS13245 3d30abe4b52514bf4f70f0f28475d10e 302 Pfam PF01578 Cytochrome C assembly protein 70 298 7.3E-26 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RPIC12D_RS13245 3d30abe4b52514bf4f70f0f28475d10e 302 PANTHER PTHR38034 31 300 6.5E-40 T 22-04-2016 RPIC12D_RS16360 76e28241d93d50aee9167699e2e57527 141 PANTHER PTHR31964 3 141 1.7E-19 T 22-04-2016 RPIC12D_RS16360 76e28241d93d50aee9167699e2e57527 141 Pfam PF00582 Universal stress protein family 3 141 6.1E-22 T 22-04-2016 IPR006016 UspA GO:0006950 RPIC12D_RS16360 76e28241d93d50aee9167699e2e57527 141 PRINTS PR01438 Universal stress protein signature 1 18 3.4E-7 T 22-04-2016 IPR006015 Universal stress protein A RPIC12D_RS16360 76e28241d93d50aee9167699e2e57527 141 PRINTS PR01438 Universal stress protein signature 101 113 3.4E-7 T 22-04-2016 IPR006015 Universal stress protein A RPIC12D_RS16360 76e28241d93d50aee9167699e2e57527 141 PRINTS PR01438 Universal stress protein signature 119 141 3.4E-7 T 22-04-2016 IPR006015 Universal stress protein A RPIC12D_RS16360 76e28241d93d50aee9167699e2e57527 141 SUPERFAMILY SSF52402 3 141 4.35E-26 T 22-04-2016 RPIC12D_RS16360 76e28241d93d50aee9167699e2e57527 141 Gene3D G3DSA:3.40.50.620 3 141 9.7E-28 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS09305 635be116fba46f3213ed6badd231b265 237 PANTHER PTHR24322:SF551 13 177 1.6E-17 T 22-04-2016 RPIC12D_RS09305 635be116fba46f3213ed6badd231b265 237 Gene3D G3DSA:3.40.50.720 5 234 1.3E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS09305 635be116fba46f3213ed6badd231b265 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.4E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS09305 635be116fba46f3213ed6badd231b265 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 3.4E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS09305 635be116fba46f3213ed6badd231b265 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 3.4E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS09305 635be116fba46f3213ed6badd231b265 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 3.4E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS09305 635be116fba46f3213ed6badd231b265 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 3.4E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS09305 635be116fba46f3213ed6badd231b265 237 SUPERFAMILY SSF51735 5 235 1.75E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS09305 635be116fba46f3213ed6badd231b265 237 PANTHER PTHR24322 13 177 1.6E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS09305 635be116fba46f3213ed6badd231b265 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 234 1.4E-30 T 22-04-2016 RPIC12D_RS08710 e5d7438184340a8c31d3bb248f5e9e82 633 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 7 61 1.5E-23 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 RPIC12D_RS08710 e5d7438184340a8c31d3bb248f5e9e82 633 PANTHER PTHR24095:SF165 1 630 0.0 T 22-04-2016 RPIC12D_RS08710 e5d7438184340a8c31d3bb248f5e9e82 633 SUPERFAMILY SSF56801 7 620 3.79E-158 T 22-04-2016 RPIC12D_RS08710 e5d7438184340a8c31d3bb248f5e9e82 633 Pfam PF13193 AMP-binding enzyme C-terminal domain 513 596 9.7E-22 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC12D_RS08710 e5d7438184340a8c31d3bb248f5e9e82 633 Gene3D G3DSA:3.40.50.980 58 244 4.7E-38 T 22-04-2016 RPIC12D_RS08710 e5d7438184340a8c31d3bb248f5e9e82 633 Gene3D G3DSA:3.40.50.980 245 401 2.2E-27 T 22-04-2016 RPIC12D_RS08710 e5d7438184340a8c31d3bb248f5e9e82 633 PANTHER PTHR24095 1 630 0.0 T 22-04-2016 RPIC12D_RS08710 e5d7438184340a8c31d3bb248f5e9e82 633 ProSitePatterns PS00455 Putative AMP-binding domain signature. 240 251 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC12D_RS08710 e5d7438184340a8c31d3bb248f5e9e82 633 Pfam PF00501 AMP-binding enzyme 71 504 3.7E-83 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC12D_RS08710 e5d7438184340a8c31d3bb248f5e9e82 633 Gene3D G3DSA:2.30.38.10 416 498 4.7E-6 T 22-04-2016 RPIC12D_RS08710 e5d7438184340a8c31d3bb248f5e9e82 633 Gene3D G3DSA:3.30.300.30 499 612 1.0E-24 T 22-04-2016 RPIC12D_RS08710 e5d7438184340a8c31d3bb248f5e9e82 633 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 6 630 0.0 T 22-04-2016 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747|UniPathway: UPA00946 RPIC12D_RS02520 4de3039b4bab3be7fd8391d50e63e835 404 Gene3D G3DSA:1.10.3210.10 154 319 4.1E-19 T 22-04-2016 IPR006674 HD domain RPIC12D_RS02520 4de3039b4bab3be7fd8391d50e63e835 404 TIGRFAM TIGR00277 HDIG: HDIG domain 162 252 4.6E-7 T 22-04-2016 IPR006675 HDIG domain RPIC12D_RS02520 4de3039b4bab3be7fd8391d50e63e835 404 SUPERFAMILY SSF109604 155 322 3.59E-30 T 22-04-2016 RPIC12D_RS02520 4de3039b4bab3be7fd8391d50e63e835 404 Pfam PF11871 Domain of unknown function (DUF3391) 2 131 5.9E-33 T 22-04-2016 IPR021812 Protein of unknown function DUF3391 RPIC12D_RS02520 4de3039b4bab3be7fd8391d50e63e835 404 Pfam PF13487 HD domain 214 275 4.9E-11 T 22-04-2016 RPIC12D_RS02520 4de3039b4bab3be7fd8391d50e63e835 404 SMART SM00471 158 294 1.4E-5 T 22-04-2016 IPR003607 HD/PDEase domain RPIC12D_RS13595 b2e23d128148d4fc51608ee8eeebed9a 166 PANTHER PTHR10430 2 166 5.3E-76 T 22-04-2016 RPIC12D_RS13595 b2e23d128148d4fc51608ee8eeebed9a 166 Pfam PF08534 Redoxin 3 163 1.8E-38 T 22-04-2016 IPR013740 Redoxin GO:0016491 RPIC12D_RS13595 b2e23d128148d4fc51608ee8eeebed9a 166 Gene3D G3DSA:3.40.30.10 1 166 1.6E-60 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS13595 b2e23d128148d4fc51608ee8eeebed9a 166 SUPERFAMILY SSF52833 1 163 1.58E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS02740 3e4564aceec11be85db36b01de84e99b 179 Pfam PF01478 Type IV leader peptidase family 13 116 4.3E-16 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RPIC12D_RS05505 60bc5cd54736516b8589473c5dab3448 248 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 5 167 6.3E-72 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 RPIC12D_RS05505 60bc5cd54736516b8589473c5dab3448 248 Gene3D G3DSA:1.10.3130.10 1 64 7.9E-26 T 22-04-2016 RPIC12D_RS05505 60bc5cd54736516b8589473c5dab3448 248 PANTHER PTHR23416 1 230 6.2E-92 T 22-04-2016 RPIC12D_RS05505 60bc5cd54736516b8589473c5dab3448 248 Gene3D G3DSA:2.160.10.10 65 183 1.1E-36 T 22-04-2016 RPIC12D_RS05505 60bc5cd54736516b8589473c5dab3448 248 PANTHER PTHR23416:SF55 1 230 6.2E-92 T 22-04-2016 RPIC12D_RS05505 60bc5cd54736516b8589473c5dab3448 248 SUPERFAMILY SSF51161 3 170 3.47E-53 T 22-04-2016 IPR011004 Trimeric LpxA-like RPIC12D_RS05505 60bc5cd54736516b8589473c5dab3448 248 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 108 3.3E-6 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC12D_RS05505 60bc5cd54736516b8589473c5dab3448 248 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 9.9E-6 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC12D_RS08765 47189f6a513e2532df03ef1de27e80e9 502 Pfam PF04293 SpoVR like protein 9 445 8.6E-173 T 22-04-2016 IPR007390 Sporulation stage V, protein R RPIC12D_RS08765 47189f6a513e2532df03ef1de27e80e9 502 PANTHER PTHR30029 1 501 3.7E-214 T 22-04-2016 RPIC12D_RS08765 47189f6a513e2532df03ef1de27e80e9 502 PANTHER PTHR30029:SF2 1 501 3.7E-214 T 22-04-2016 RPIC12D_RS00350 e8c8340fa85e1a2cff8a89e6b98f57c5 306 Gene3D G3DSA:3.40.1090.10 13 183 1.7E-17 T 22-04-2016 RPIC12D_RS00350 e8c8340fa85e1a2cff8a89e6b98f57c5 306 PANTHER PTHR14226 6 191 4.8E-41 T 22-04-2016 RPIC12D_RS00350 e8c8340fa85e1a2cff8a89e6b98f57c5 306 SUPERFAMILY SSF52151 6 209 1.29E-51 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC12D_RS00350 e8c8340fa85e1a2cff8a89e6b98f57c5 306 Pfam PF01734 Patatin-like phospholipase 10 182 3.2E-26 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RPIC12D_RS04885 fab6c3fa4f584e0773ab28de540cbade 178 PANTHER PTHR38099 4 177 6.7E-17 T 22-04-2016 RPIC12D_RS04885 fab6c3fa4f584e0773ab28de540cbade 178 Pfam PF02620 Uncharacterized ACR, COG1399 70 175 8.5E-22 T 22-04-2016 IPR003772 Protein of unknown function DUF177 RPIC12D_RS01635 cf3a27beca523608b0d00a71555ad343 144 Pfam PF04143 Sulphur transport 15 133 1.2E-6 T 22-04-2016 IPR007272 Sulphur transport domain RPIC12D_RS01635 cf3a27beca523608b0d00a71555ad343 144 PANTHER PTHR30574:SF1 9 138 1.5E-23 T 22-04-2016 RPIC12D_RS01635 cf3a27beca523608b0d00a71555ad343 144 PANTHER PTHR30574 9 138 1.5E-23 T 22-04-2016 RPIC12D_RS16290 0fd086d79c9b68ed6ae9ef823f7a12fc 349 PANTHER PTHR22946:SF0 71 267 7.4E-22 T 22-04-2016 RPIC12D_RS16290 0fd086d79c9b68ed6ae9ef823f7a12fc 349 SUPERFAMILY SSF53474 63 267 3.18E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS16290 0fd086d79c9b68ed6ae9ef823f7a12fc 349 PANTHER PTHR22946 71 267 7.4E-22 T 22-04-2016 RPIC12D_RS16290 0fd086d79c9b68ed6ae9ef823f7a12fc 349 Gene3D G3DSA:3.40.50.1820 67 266 1.5E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS16290 0fd086d79c9b68ed6ae9ef823f7a12fc 349 Pfam PF01738 Dienelactone hydrolase family 71 268 7.4E-15 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 RPIC12D_RS21275 6fc158e0c31685e4de34d80311ab34e6 315 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 3 117 1.2E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS21275 6fc158e0c31685e4de34d80311ab34e6 315 SMART SM00448 158 274 3.8E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS21275 6fc158e0c31685e4de34d80311ab34e6 315 SUPERFAMILY SSF55874 3 123 9.69E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS21275 6fc158e0c31685e4de34d80311ab34e6 315 SUPERFAMILY SSF52172 157 278 1.15E-32 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS21275 6fc158e0c31685e4de34d80311ab34e6 315 Gene3D G3DSA:3.40.50.2300 155 282 2.0E-33 T 22-04-2016 RPIC12D_RS21275 6fc158e0c31685e4de34d80311ab34e6 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 103 116 7.8E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS21275 6fc158e0c31685e4de34d80311ab34e6 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 44 58 7.8E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS21275 6fc158e0c31685e4de34d80311ab34e6 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 79 97 7.8E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS21275 6fc158e0c31685e4de34d80311ab34e6 315 PRINTS PR00344 Bacterial sensor protein C-terminal signature 62 72 7.8E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS21275 6fc158e0c31685e4de34d80311ab34e6 315 Pfam PF00072 Response regulator receiver domain 160 274 2.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS21275 6fc158e0c31685e4de34d80311ab34e6 315 PANTHER PTHR24423 1 122 4.9E-85 T 22-04-2016 RPIC12D_RS21275 6fc158e0c31685e4de34d80311ab34e6 315 PANTHER PTHR24423 143 315 4.9E-85 T 22-04-2016 RPIC12D_RS21275 6fc158e0c31685e4de34d80311ab34e6 315 Gene3D G3DSA:3.30.565.10 2 121 3.3E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS21275 6fc158e0c31685e4de34d80311ab34e6 315 SMART SM00387 2 119 5.8E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS10430 d90f52dae0db73a6d371ad5d7f52247f 230 SUPERFAMILY SSF161098 21 208 4.71E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS10430 d90f52dae0db73a6d371ad5d7f52247f 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 222 1.7E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS10430 d90f52dae0db73a6d371ad5d7f52247f 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 116 1.7E-25 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS10430 d90f52dae0db73a6d371ad5d7f52247f 230 Gene3D G3DSA:1.10.3720.10 22 223 8.6E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS10430 d90f52dae0db73a6d371ad5d7f52247f 230 PANTHER PTHR30614 1 228 4.7E-78 T 22-04-2016 RPIC12D_RS14325 9d281c96815aa9f21176150f03058510 374 SUPERFAMILY SSF56935 21 374 1.91E-86 T 22-04-2016 RPIC12D_RS14325 9d281c96815aa9f21176150f03058510 374 PRINTS PR00184 Neisseria sp. porin signature 294 318 2.5E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS14325 9d281c96815aa9f21176150f03058510 374 PRINTS PR00184 Neisseria sp. porin signature 188 205 2.5E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS14325 9d281c96815aa9f21176150f03058510 374 PRINTS PR00184 Neisseria sp. porin signature 58 83 2.5E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS14325 9d281c96815aa9f21176150f03058510 374 Gene3D G3DSA:2.40.160.10 21 374 2.5E-98 T 22-04-2016 IPR023614 Porin domain RPIC12D_RS14325 9d281c96815aa9f21176150f03058510 374 Pfam PF13609 Gram-negative porin 7 321 1.2E-54 T 22-04-2016 RPIC12D_RS14325 9d281c96815aa9f21176150f03058510 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 187 199 2.3E-6 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS14325 9d281c96815aa9f21176150f03058510 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 100 110 2.3E-6 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS14325 9d281c96815aa9f21176150f03058510 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 297 314 2.3E-6 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS14325 9d281c96815aa9f21176150f03058510 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 56 67 2.3E-6 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS02535 bf58eeead5681355b3f125ed778552cb 727 Gene3D G3DSA:2.40.170.20 170 724 2.2E-69 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS02535 bf58eeead5681355b3f125ed778552cb 727 Gene3D G3DSA:2.170.130.10 57 169 5.4E-7 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS02535 bf58eeead5681355b3f125ed778552cb 727 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 168 1.2E-5 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS02535 bf58eeead5681355b3f125ed778552cb 727 SUPERFAMILY SSF56935 43 727 1.14E-85 T 22-04-2016 RPIC12D_RS02535 bf58eeead5681355b3f125ed778552cb 727 Pfam PF00593 TonB dependent receptor 459 724 1.7E-23 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC12D_RS13970 1fed6b5ae1941a1ccebf3c9520c27aeb 168 Pfam PF14163 Super-infection exclusion protein B 22 161 3.4E-30 T 22-04-2016 IPR025982 Superinfection exclusion protein B RPIC12D_RS09105 8f09a887e5aa5f73c1ff9f472fb5c08f 288 SUPERFAMILY SSF110997 211 285 1.01E-9 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RPIC12D_RS09105 8f09a887e5aa5f73c1ff9f472fb5c08f 288 Pfam PF05036 Sporulation related domain 212 281 4.8E-11 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RPIC12D_RS09105 8f09a887e5aa5f73c1ff9f472fb5c08f 288 Gene3D G3DSA:3.30.70.1070 210 286 2.2E-10 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RPIC12D_RS02365 8c1616016108319a35606bbbec6e05fd 65 Gene3D G3DSA:2.60.260.40 5 63 4.1E-20 T 22-04-2016 IPR019401 Zinc finger, CHCC-type RPIC12D_RS02365 8c1616016108319a35606bbbec6e05fd 65 Pfam PF10276 Zinc-finger domain 28 53 1.7E-9 T 22-04-2016 IPR019401 Zinc finger, CHCC-type RPIC12D_RS13370 6342010c186291c8a77faca6ecf5140e 1306 Gene3D G3DSA:3.40.50.150 456 577 4.2E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS13370 6342010c186291c8a77faca6ecf5140e 1306 Gene3D G3DSA:3.40.50.150 863 925 4.2E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS13370 6342010c186291c8a77faca6ecf5140e 1306 Gene3D G3DSA:3.40.50.150 746 779 4.2E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS13370 6342010c186291c8a77faca6ecf5140e 1306 PANTHER PTHR33841 664 801 1.8E-190 T 22-04-2016 RPIC12D_RS13370 6342010c186291c8a77faca6ecf5140e 1306 PANTHER PTHR33841 865 1219 1.8E-190 T 22-04-2016 RPIC12D_RS13370 6342010c186291c8a77faca6ecf5140e 1306 PANTHER PTHR33841 461 641 1.8E-190 T 22-04-2016 RPIC12D_RS13370 6342010c186291c8a77faca6ecf5140e 1306 PANTHER PTHR33841 13 442 1.8E-190 T 22-04-2016 RPIC12D_RS13370 6342010c186291c8a77faca6ecf5140e 1306 SUPERFAMILY SSF53335 763 783 6.67E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS13370 6342010c186291c8a77faca6ecf5140e 1306 SUPERFAMILY SSF53335 859 1027 6.67E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS13370 6342010c186291c8a77faca6ecf5140e 1306 SUPERFAMILY SSF53335 290 599 6.67E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS13370 6342010c186291c8a77faca6ecf5140e 1306 Pfam PF02384 N-6 DNA Methylase 461 575 1.6E-7 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RPIC12D_RS13370 6342010c186291c8a77faca6ecf5140e 1306 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 507 521 2.4E-11 T 22-04-2016 RPIC12D_RS13370 6342010c186291c8a77faca6ecf5140e 1306 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 765 777 2.4E-11 T 22-04-2016 RPIC12D_RS13370 6342010c186291c8a77faca6ecf5140e 1306 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 466 482 2.4E-11 T 22-04-2016 RPIC12D_RS13370 6342010c186291c8a77faca6ecf5140e 1306 PANTHER PTHR33841:SF2 664 801 1.8E-190 T 22-04-2016 RPIC12D_RS13370 6342010c186291c8a77faca6ecf5140e 1306 PANTHER PTHR33841:SF2 865 1219 1.8E-190 T 22-04-2016 RPIC12D_RS13370 6342010c186291c8a77faca6ecf5140e 1306 PANTHER PTHR33841:SF2 461 641 1.8E-190 T 22-04-2016 RPIC12D_RS13370 6342010c186291c8a77faca6ecf5140e 1306 PANTHER PTHR33841:SF2 13 442 1.8E-190 T 22-04-2016 RPIC12D_RS00665 c3fd1bc53c2d7920484b7124bcc4d50a 226 SUPERFAMILY SSF53056 4 207 1.57E-73 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RPIC12D_RS00665 c3fd1bc53c2d7920484b7124bcc4d50a 226 PANTHER PTHR11002:SF20 4 209 1.3E-110 T 22-04-2016 RPIC12D_RS00665 c3fd1bc53c2d7920484b7124bcc4d50a 226 Gene3D G3DSA:3.40.1050.10 3 206 5.3E-74 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RPIC12D_RS00665 c3fd1bc53c2d7920484b7124bcc4d50a 226 PANTHER PTHR11002 4 209 1.3E-110 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RPIC12D_RS00665 c3fd1bc53c2d7920484b7124bcc4d50a 226 Pfam PF00484 Carbonic anhydrase 38 189 3.7E-50 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RPIC12D_RS00665 c3fd1bc53c2d7920484b7124bcc4d50a 226 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 43 50 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RPIC12D_RS00665 c3fd1bc53c2d7920484b7124bcc4d50a 226 SMART SM00947 31 194 1.0E-65 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RPIC12D_RS03465 3fc4beddc1d55920c811937016a91743 101 SUPERFAMILY SSF47413 23 88 6.48E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS03465 3fc4beddc1d55920c811937016a91743 101 PANTHER PTHR10245:SF41 1 85 3.7E-16 T 22-04-2016 RPIC12D_RS03465 3fc4beddc1d55920c811937016a91743 101 Pfam PF01381 Helix-turn-helix 29 81 9.6E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC12D_RS03465 3fc4beddc1d55920c811937016a91743 101 PANTHER PTHR10245 1 85 3.7E-16 T 22-04-2016 RPIC12D_RS03465 3fc4beddc1d55920c811937016a91743 101 Gene3D G3DSA:1.10.260.40 22 92 1.6E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS03465 3fc4beddc1d55920c811937016a91743 101 SMART SM00530 28 83 1.9E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC12D_RS04100 a6270af4b5d9ce4192c92d9cd4a715be 261 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 26 210 1.4E-44 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS04100 a6270af4b5d9ce4192c92d9cd4a715be 261 SUPERFAMILY SSF53639 17 232 6.67E-59 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS04100 a6270af4b5d9ce4192c92d9cd4a715be 261 PANTHER PTHR10672 16 260 5.3E-94 T 22-04-2016 RPIC12D_RS04100 a6270af4b5d9ce4192c92d9cd4a715be 261 SMART SM01007 25 210 7.6E-56 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS04100 a6270af4b5d9ce4192c92d9cd4a715be 261 Gene3D G3DSA:3.40.225.10 20 237 7.6E-59 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS16380 38289d31978e14d60a1422ac5c521789 590 Pfam PF03814 Potassium-transporting ATPase A subunit 10 588 4.6E-249 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RPIC12D_RS16380 38289d31978e14d60a1422ac5c521789 590 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 240 589 1.0E-163 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RPIC12D_RS16380 38289d31978e14d60a1422ac5c521789 590 PANTHER PTHR30607 1 213 2.5E-303 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RPIC12D_RS16380 38289d31978e14d60a1422ac5c521789 590 PANTHER PTHR30607 243 589 2.5E-303 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RPIC12D_RS16380 38289d31978e14d60a1422ac5c521789 590 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 590 36.417 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RPIC12D_RS16380 38289d31978e14d60a1422ac5c521789 590 PIRSF PIRSF001294 1 590 9.3E-247 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RPIC12D_RS05320 9912c31270344c6fa7258ab4a004f1f6 316 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 310 3.3E-104 T 22-04-2016 IPR007296 Domain of unknown function DUF403 RPIC12D_RS05320 9912c31270344c6fa7258ab4a004f1f6 316 PANTHER PTHR34595 1 311 9.2E-99 T 22-04-2016 RPIC12D_RS11835 52fe9c6e69866dbbf3cda97f4b5dc5eb 438 Pfam PF00083 Sugar (and other) transporter 30 233 4.4E-17 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RPIC12D_RS11835 52fe9c6e69866dbbf3cda97f4b5dc5eb 438 Gene3D G3DSA:1.20.1250.20 25 230 3.3E-23 T 22-04-2016 RPIC12D_RS11835 52fe9c6e69866dbbf3cda97f4b5dc5eb 438 Gene3D G3DSA:1.20.1250.20 247 431 5.2E-25 T 22-04-2016 RPIC12D_RS11835 52fe9c6e69866dbbf3cda97f4b5dc5eb 438 PANTHER PTHR23508 24 430 7.5E-135 T 22-04-2016 RPIC12D_RS11835 52fe9c6e69866dbbf3cda97f4b5dc5eb 438 Pfam PF07690 Major Facilitator Superfamily 287 432 2.3E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS11835 52fe9c6e69866dbbf3cda97f4b5dc5eb 438 SUPERFAMILY SSF103473 24 434 1.96E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS11835 52fe9c6e69866dbbf3cda97f4b5dc5eb 438 PANTHER PTHR23508:SF11 24 430 7.5E-135 T 22-04-2016 RPIC12D_RS08535 336a71162e905641c42f90d9a950fc1e 492 Gene3D G3DSA:3.90.190.10 386 484 1.3E-35 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like RPIC12D_RS08535 336a71162e905641c42f90d9a950fc1e 492 Gene3D G3DSA:3.40.640.10 20 255 2.2E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS08535 336a71162e905641c42f90d9a950fc1e 492 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 199 218 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RPIC12D_RS08535 336a71162e905641c42f90d9a950fc1e 492 Gene3D G3DSA:3.90.1150.10 256 375 6.6E-32 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS08535 336a71162e905641c42f90d9a950fc1e 492 PANTHER PTHR11601:SF45 1 382 8.5E-160 T 22-04-2016 RPIC12D_RS08535 336a71162e905641c42f90d9a950fc1e 492 Pfam PF00266 Aminotransferase class-V 9 368 3.0E-77 T 22-04-2016 IPR000192 Aminotransferase class V domain RPIC12D_RS08535 336a71162e905641c42f90d9a950fc1e 492 Pfam PF04273 Putative phosphatase (DUF442) 389 484 1.4E-25 T 22-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- RPIC12D_RS08535 336a71162e905641c42f90d9a950fc1e 492 SUPERFAMILY SSF53383 6 381 1.01E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS08535 336a71162e905641c42f90d9a950fc1e 492 PANTHER PTHR11601 1 382 8.5E-160 T 22-04-2016 RPIC12D_RS07860 4e3b49c7aa976c67f6fe3cf5b3263cd6 402 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 59 384 4.6E-76 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RPIC12D_RS07860 4e3b49c7aa976c67f6fe3cf5b3263cd6 402 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 86 298 2.1E-25 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RPIC12D_RS07860 4e3b49c7aa976c67f6fe3cf5b3263cd6 402 PANTHER PTHR30469 10 396 7.7E-81 T 22-04-2016 RPIC12D_RS07860 4e3b49c7aa976c67f6fe3cf5b3263cd6 402 Gene3D G3DSA:2.40.50.100 192 223 7.5E-17 T 22-04-2016 RPIC12D_RS07860 4e3b49c7aa976c67f6fe3cf5b3263cd6 402 Gene3D G3DSA:2.40.50.100 89 117 7.5E-17 T 22-04-2016 RPIC12D_RS07860 4e3b49c7aa976c67f6fe3cf5b3263cd6 402 SUPERFAMILY SSF111369 72 300 1.7E-24 T 22-04-2016 RPIC12D_RS04535 f94efa584dfcc94e34018f6aa7422723 558 PANTHER PTHR30003 1 558 2.1E-235 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RPIC12D_RS04535 f94efa584dfcc94e34018f6aa7422723 558 Pfam PF02652 L-lactate permease 15 546 3.4E-153 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RPIC12D_RS04535 f94efa584dfcc94e34018f6aa7422723 558 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 548 7.7E-154 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RPIC12D_RS04535 f94efa584dfcc94e34018f6aa7422723 558 PANTHER PTHR30003:SF0 1 558 2.1E-235 T 22-04-2016 RPIC12D_RS11915 51eeab138fb0db0aac52415de2ddb7d9 518 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 340 497 9.9E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS11915 51eeab138fb0db0aac52415de2ddb7d9 518 PANTHER PTHR30177:SF4 252 511 2.9E-80 T 22-04-2016 RPIC12D_RS11915 51eeab138fb0db0aac52415de2ddb7d9 518 SUPERFAMILY SSF53850 35 299 8.51E-56 T 22-04-2016 RPIC12D_RS11915 51eeab138fb0db0aac52415de2ddb7d9 518 Gene3D G3DSA:3.40.190.10 245 299 1.6E-39 T 22-04-2016 RPIC12D_RS11915 51eeab138fb0db0aac52415de2ddb7d9 518 Gene3D G3DSA:3.40.190.10 34 139 1.6E-39 T 22-04-2016 RPIC12D_RS11915 51eeab138fb0db0aac52415de2ddb7d9 518 Gene3D G3DSA:3.40.190.120 140 238 3.4E-29 T 22-04-2016 RPIC12D_RS11915 51eeab138fb0db0aac52415de2ddb7d9 518 PANTHER PTHR30177 252 511 2.9E-80 T 22-04-2016 RPIC12D_RS11915 51eeab138fb0db0aac52415de2ddb7d9 518 Gene3D G3DSA:1.10.3720.10 314 497 2.5E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS11915 51eeab138fb0db0aac52415de2ddb7d9 518 SUPERFAMILY SSF161098 317 510 4.71E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS11915 51eeab138fb0db0aac52415de2ddb7d9 518 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 35 296 2.5E-53 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 RPIC12D_RS09595 fdf7dc3eeb4ef750206ed712f49470e6 585 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 19 183 2.3E-59 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RPIC12D_RS09595 fdf7dc3eeb4ef750206ed712f49470e6 585 SUPERFAMILY SSF52518 386 580 5.7E-67 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS09595 fdf7dc3eeb4ef750206ed712f49470e6 585 Gene3D G3DSA:3.40.50.1220 203 371 1.4E-65 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC12D_RS09595 fdf7dc3eeb4ef750206ed712f49470e6 585 PANTHER PTHR18968 1 580 0.0 T 22-04-2016 RPIC12D_RS09595 fdf7dc3eeb4ef750206ed712f49470e6 585 SUPERFAMILY SSF52467 202 375 7.74E-64 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC12D_RS09595 fdf7dc3eeb4ef750206ed712f49470e6 585 Gene3D G3DSA:3.40.50.970 372 573 4.7E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS09595 fdf7dc3eeb4ef750206ed712f49470e6 585 PANTHER PTHR18968:SF116 1 580 0.0 T 22-04-2016 RPIC12D_RS09595 fdf7dc3eeb4ef750206ed712f49470e6 585 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 19 579 1.0E-254 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS09595 fdf7dc3eeb4ef750206ed712f49470e6 585 Gene3D G3DSA:3.40.50.970 18 195 7.3E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS09595 fdf7dc3eeb4ef750206ed712f49470e6 585 SUPERFAMILY SSF52518 15 198 6.8E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC12D_RS09595 fdf7dc3eeb4ef750206ed712f49470e6 585 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 408 556 6.0E-49 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RPIC12D_RS09595 fdf7dc3eeb4ef750206ed712f49470e6 585 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 209 344 1.8E-46 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RPIC12D_RS00280 18bf58a225c8cde31ec3379f4aec4d7e 88 Pfam PF05488 PAAR motif 12 80 4.1E-24 T 22-04-2016 IPR008727 PAAR motif RPIC12D_RS14480 8f2e3521b192fc347f9b34a6317cf01e 346 PANTHER PTHR30349 24 302 3.6E-49 T 22-04-2016 RPIC12D_RS14480 8f2e3521b192fc347f9b34a6317cf01e 346 SUPERFAMILY SSF53850 51 258 1.38E-5 T 22-04-2016 RPIC12D_RS14480 8f2e3521b192fc347f9b34a6317cf01e 346 PANTHER PTHR30349:SF32 24 302 3.6E-49 T 22-04-2016 RPIC12D_RS14480 8f2e3521b192fc347f9b34a6317cf01e 346 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 69 339 4.3E-51 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RPIC12D_RS14480 8f2e3521b192fc347f9b34a6317cf01e 346 PIRSF PIRSF017082 20 343 4.0E-52 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RPIC12D_RS18430 63bad0e8c47089fb6798e7c718047924 89 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 51 66 3.1E-12 T 22-04-2016 RPIC12D_RS18430 63bad0e8c47089fb6798e7c718047924 89 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 68 83 3.1E-12 T 22-04-2016 RPIC12D_RS18430 63bad0e8c47089fb6798e7c718047924 89 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 51 69 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RPIC12D_RS18430 63bad0e8c47089fb6798e7c718047924 89 PANTHER PTHR22931 1 89 1.7E-28 T 22-04-2016 RPIC12D_RS18430 63bad0e8c47089fb6798e7c718047924 89 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 2 89 2.9E-33 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RPIC12D_RS18430 63bad0e8c47089fb6798e7c718047924 89 Gene3D G3DSA:3.20.20.60 2 89 5.5E-29 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS18430 63bad0e8c47089fb6798e7c718047924 89 SUPERFAMILY SSF51621 2 89 3.66E-29 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS15520 5dcbaedae4ad413b695504485901dc71 326 SUPERFAMILY SSF53474 32 324 2.68E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS15520 5dcbaedae4ad413b695504485901dc71 326 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 158 170 - T 22-04-2016 IPR033140 Lipase, GDXG, putative serine active site RPIC12D_RS15520 5dcbaedae4ad413b695504485901dc71 326 PANTHER PTHR23024 71 292 5.2E-39 T 22-04-2016 RPIC12D_RS15520 5dcbaedae4ad413b695504485901dc71 326 Pfam PF07859 alpha/beta hydrolase fold 87 292 4.5E-31 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RPIC12D_RS15520 5dcbaedae4ad413b695504485901dc71 326 Gene3D G3DSA:3.40.50.1820 60 325 6.8E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS02955 83d7b035f98d4135d211c1b3f939f755 411 SUPERFAMILY SSF53756 19 404 2.77E-34 T 22-04-2016 RPIC12D_RS02955 83d7b035f98d4135d211c1b3f939f755 411 PANTHER PTHR12526 67 392 7.7E-17 T 22-04-2016 RPIC12D_RS02955 83d7b035f98d4135d211c1b3f939f755 411 PANTHER PTHR12526 1 43 7.7E-17 T 22-04-2016 RPIC12D_RS02955 83d7b035f98d4135d211c1b3f939f755 411 Pfam PF13692 Glycosyl transferases group 1 247 376 2.7E-12 T 22-04-2016 RPIC12D_RS02955 83d7b035f98d4135d211c1b3f939f755 411 Pfam PF13579 Glycosyl transferase 4-like domain 21 186 2.3E-7 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RPIC12D_RS00810 2408b923ccb892bb280d5b033cd81f8e 334 SUPERFAMILY SSF51679 1 326 1.83E-79 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC12D_RS00810 2408b923ccb892bb280d5b033cd81f8e 334 Gene3D G3DSA:3.20.20.30 1 326 2.8E-85 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC12D_RS00810 2408b923ccb892bb280d5b033cd81f8e 334 Pfam PF00296 Luciferase-like monooxygenase 4 297 9.8E-57 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC12D_RS00810 2408b923ccb892bb280d5b033cd81f8e 334 PANTHER PTHR30137 1 329 3.9E-57 T 22-04-2016 RPIC12D_RS15890 31a5f0e7e11228af7be977578b47d07c 381 PANTHER PTHR30483:SF20 9 378 4.4E-87 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC12D_RS15890 31a5f0e7e11228af7be977578b47d07c 381 SUPERFAMILY SSF53822 27 375 5.81E-91 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS15890 31a5f0e7e11228af7be977578b47d07c 381 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 94 104 1.6E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC12D_RS15890 31a5f0e7e11228af7be977578b47d07c 381 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 260 278 1.6E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC12D_RS15890 31a5f0e7e11228af7be977578b47d07c 381 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 1.6E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC12D_RS15890 31a5f0e7e11228af7be977578b47d07c 381 Pfam PF13458 Periplasmic binding protein 29 371 3.5E-58 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC12D_RS15890 31a5f0e7e11228af7be977578b47d07c 381 Gene3D G3DSA:3.40.50.2300 28 229 1.5E-64 T 22-04-2016 RPIC12D_RS15890 31a5f0e7e11228af7be977578b47d07c 381 PANTHER PTHR30483 9 378 4.4E-87 T 22-04-2016 RPIC12D_RS09260 f26946c6016c6782c2d4cfeea29284c3 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.235 T 22-04-2016 IPR005583 Peroxide stress protein YaaA RPIC12D_RS09260 f26946c6016c6782c2d4cfeea29284c3 257 Pfam PF03883 Protein of unknown function (DUF328) 1 242 2.6E-91 T 22-04-2016 IPR005583 Peroxide stress protein YaaA RPIC12D_RS09260 f26946c6016c6782c2d4cfeea29284c3 257 PANTHER PTHR30283:SF3 2 256 8.5E-108 T 22-04-2016 RPIC12D_RS09260 f26946c6016c6782c2d4cfeea29284c3 257 PANTHER PTHR30283 2 256 8.5E-108 T 22-04-2016 RPIC12D_RS06690 5cc3c060127bd8f01fc5f4dac15d8147 306 PANTHER PTHR22911 18 306 1.9E-27 T 22-04-2016 RPIC12D_RS06690 5cc3c060127bd8f01fc5f4dac15d8147 306 SUPERFAMILY SSF103481 217 304 8.5E-10 T 22-04-2016 RPIC12D_RS06690 5cc3c060127bd8f01fc5f4dac15d8147 306 SUPERFAMILY SSF103481 57 152 3.27E-11 T 22-04-2016 RPIC12D_RS06690 5cc3c060127bd8f01fc5f4dac15d8147 306 Pfam PF00892 EamA-like transporter family 164 298 2.7E-10 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS06690 5cc3c060127bd8f01fc5f4dac15d8147 306 Pfam PF00892 EamA-like transporter family 20 148 3.4E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS05040 43a3a70478d98a2b14d589cac7c156de 559 PIRSF PIRSF029644 8 536 4.5E-171 T 22-04-2016 IPR016930 Uncharacterised conserved protein UCP029644, LysM, PA4035 RPIC12D_RS05040 43a3a70478d98a2b14d589cac7c156de 559 Gene3D G3DSA:3.10.350.10 45 92 8.1E-6 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS05040 43a3a70478d98a2b14d589cac7c156de 559 SMART SM00257 45 92 1.8E-5 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS05040 43a3a70478d98a2b14d589cac7c156de 559 SUPERFAMILY SSF54106 45 92 3.53E-5 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS05040 43a3a70478d98a2b14d589cac7c156de 559 Pfam PF01476 LysM domain 46 92 1.6E-4 T 22-04-2016 IPR018392 LysM domain RPIC12D_RS05040 43a3a70478d98a2b14d589cac7c156de 559 Pfam PF04773 FecR protein 129 229 1.8E-16 T 22-04-2016 IPR006860 FecR protein RPIC12D_RS11640 8e75db9caf06d4400d992a3c4aaaecca 162 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 22 159 2.2E-12 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RPIC12D_RS11640 8e75db9caf06d4400d992a3c4aaaecca 162 SUPERFAMILY SSF54534 22 161 6.68E-32 T 22-04-2016 RPIC12D_RS11640 8e75db9caf06d4400d992a3c4aaaecca 162 Gene3D G3DSA:3.10.50.40 13 94 1.2E-18 T 22-04-2016 RPIC12D_RS11640 8e75db9caf06d4400d992a3c4aaaecca 162 Gene3D G3DSA:3.10.50.40 148 161 1.2E-18 T 22-04-2016 RPIC12D_RS01480 882bb2c34a8a38f8cd7cacb00c8480c2 134 Pfam PF13467 Ribbon-helix-helix domain 17 83 1.3E-25 T 22-04-2016 IPR027373 Ribbon-helix-helix domain RPIC12D_RS01625 3da5fa7b59bcdf27ef1021ddb097038c 269 PANTHER PTHR35008:SF4 34 258 5.4E-43 T 22-04-2016 RPIC12D_RS01625 3da5fa7b59bcdf27ef1021ddb097038c 269 SUPERFAMILY SSF46626 158 252 5.82E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS01625 3da5fa7b59bcdf27ef1021ddb097038c 269 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 165 243 4.2E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS01625 3da5fa7b59bcdf27ef1021ddb097038c 269 SUPERFAMILY SSF46626 32 145 2.0E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS01625 3da5fa7b59bcdf27ef1021ddb097038c 269 Gene3D G3DSA:1.10.760.10 34 146 3.7E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS01625 3da5fa7b59bcdf27ef1021ddb097038c 269 Gene3D G3DSA:1.10.760.10 162 251 2.1E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS01625 3da5fa7b59bcdf27ef1021ddb097038c 269 PANTHER PTHR35008 34 258 5.4E-43 T 22-04-2016 RPIC12D_RS11095 34ae07d0ebe642773e131e8920aa0940 279 Pfam PF00005 ABC transporter 39 187 1.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS11095 34ae07d0ebe642773e131e8920aa0940 279 SMART SM00382 47 236 8.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS11095 34ae07d0ebe642773e131e8920aa0940 279 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS11095 34ae07d0ebe642773e131e8920aa0940 279 Gene3D G3DSA:3.40.50.300 25 248 3.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11095 34ae07d0ebe642773e131e8920aa0940 279 SUPERFAMILY SSF52540 22 248 8.49E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11095 34ae07d0ebe642773e131e8920aa0940 279 PANTHER PTHR24220:SF266 24 261 4.9E-65 T 22-04-2016 RPIC12D_RS11095 34ae07d0ebe642773e131e8920aa0940 279 PANTHER PTHR24220 24 261 4.9E-65 T 22-04-2016 RPIC12D_RS01815 0c22e8ccf5bd1422960d3ac97754e83f 399 Gene3D G3DSA:3.40.47.10 191 282 4.2E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS01815 0c22e8ccf5bd1422960d3ac97754e83f 399 Gene3D G3DSA:3.40.47.10 7 130 4.2E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS01815 0c22e8ccf5bd1422960d3ac97754e83f 399 PANTHER PTHR18919:SF87 3 399 4.0E-167 T 22-04-2016 RPIC12D_RS01815 0c22e8ccf5bd1422960d3ac97754e83f 399 SUPERFAMILY SSF53901 278 398 1.01E-41 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS01815 0c22e8ccf5bd1422960d3ac97754e83f 399 ProSitePatterns PS00099 Thiolases active site. 380 393 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RPIC12D_RS01815 0c22e8ccf5bd1422960d3ac97754e83f 399 Pfam PF02803 Thiolase, C-terminal domain 278 398 2.3E-43 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RPIC12D_RS01815 0c22e8ccf5bd1422960d3ac97754e83f 399 Pfam PF00108 Thiolase, N-terminal domain 9 268 1.1E-71 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RPIC12D_RS01815 0c22e8ccf5bd1422960d3ac97754e83f 399 PANTHER PTHR18919 3 399 4.0E-167 T 22-04-2016 RPIC12D_RS01815 0c22e8ccf5bd1422960d3ac97754e83f 399 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 397 9.4E-141 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC12D_RS01815 0c22e8ccf5bd1422960d3ac97754e83f 399 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RPIC12D_RS01815 0c22e8ccf5bd1422960d3ac97754e83f 399 PIRSF PIRSF000429 2 399 9.9E-125 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC12D_RS01815 0c22e8ccf5bd1422960d3ac97754e83f 399 SUPERFAMILY SSF53901 4 273 5.29E-72 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS01815 0c22e8ccf5bd1422960d3ac97754e83f 399 ProSitePatterns PS00737 Thiolases signature 2. 345 361 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RPIC12D_RS01815 0c22e8ccf5bd1422960d3ac97754e83f 399 Gene3D G3DSA:3.40.47.10 151 190 2.6E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS01815 0c22e8ccf5bd1422960d3ac97754e83f 399 Gene3D G3DSA:3.40.47.10 283 398 2.6E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS06145 b3a72cc89a234f63d9d511a94eacfe32 132 Pfam PF16778 Phage tail assembly chaperone protein 55 112 6.2E-16 T 22-04-2016 IPR031893 Phage tail assembly chaperone protein RPIC12D_RS13175 0ca1a5e88790f570e2dcd18973f0d128 151 PANTHER PTHR36919 16 149 1.7E-45 T 22-04-2016 RPIC12D_RS13175 0ca1a5e88790f570e2dcd18973f0d128 151 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 32 149 6.6E-33 T 22-04-2016 IPR019223 Domain of unknown function DUF2147 RPIC12D_RS13175 0ca1a5e88790f570e2dcd18973f0d128 151 PANTHER PTHR36919:SF1 16 149 1.7E-45 T 22-04-2016 RPIC12D_RS05920 346aadd3e9c6d30a0e69d8cd7923567b 272 Pfam PF00994 Probable molybdopterin binding domain 4 170 2.3E-27 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS05920 346aadd3e9c6d30a0e69d8cd7923567b 272 PANTHER PTHR13939 1 220 2.5E-33 T 22-04-2016 RPIC12D_RS05920 346aadd3e9c6d30a0e69d8cd7923567b 272 SUPERFAMILY SSF53218 2 211 5.5E-38 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS05920 346aadd3e9c6d30a0e69d8cd7923567b 272 SMART SM00852 4 177 7.7E-32 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS05920 346aadd3e9c6d30a0e69d8cd7923567b 272 Gene3D G3DSA:3.40.980.10 2 174 5.9E-31 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS01445 518af543e6a6510c1f038ffd61899048 503 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 482 489 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01445 518af543e6a6510c1f038ffd61899048 503 PRINTS PR00045 Sigma-54 factor signature 419 430 1.9E-29 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01445 518af543e6a6510c1f038ffd61899048 503 PRINTS PR00045 Sigma-54 factor signature 477 495 1.9E-29 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01445 518af543e6a6510c1f038ffd61899048 503 PRINTS PR00045 Sigma-54 factor signature 403 415 1.9E-29 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01445 518af543e6a6510c1f038ffd61899048 503 PRINTS PR00045 Sigma-54 factor signature 215 232 1.9E-29 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01445 518af543e6a6510c1f038ffd61899048 503 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 391 410 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01445 518af543e6a6510c1f038ffd61899048 503 Pfam PF04552 Sigma-54, DNA binding domain 345 501 1.0E-67 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding RPIC12D_RS01445 518af543e6a6510c1f038ffd61899048 503 PIRSF PIRSF000774 1 503 1.2E-155 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01445 518af543e6a6510c1f038ffd61899048 503 PANTHER PTHR32248 82 503 2.4E-149 T 22-04-2016 RPIC12D_RS01445 518af543e6a6510c1f038ffd61899048 503 PANTHER PTHR32248 1 62 2.4E-149 T 22-04-2016 RPIC12D_RS01445 518af543e6a6510c1f038ffd61899048 503 Pfam PF04963 Sigma-54 factor, core binding domain 141 330 3.7E-56 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 RPIC12D_RS01445 518af543e6a6510c1f038ffd61899048 503 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 501 8.3E-144 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS01445 518af543e6a6510c1f038ffd61899048 503 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 1.5E-16 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC12D_RS11235 7076fe50f0d7a7472bd8abea12052ec4 341 PANTHER PTHR30349 122 341 5.0E-13 T 22-04-2016 RPIC12D_RS11235 7076fe50f0d7a7472bd8abea12052ec4 341 Gene3D G3DSA:1.10.443.10 171 337 2.4E-19 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS11235 7076fe50f0d7a7472bd8abea12052ec4 341 Pfam PF00589 Phage integrase family 174 333 4.9E-17 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS11235 7076fe50f0d7a7472bd8abea12052ec4 341 SUPERFAMILY SSF56349 56 337 1.27E-35 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC12D_RS13650 321cfd58982468f382531716b101fa23 514 Pfam PF02875 Mur ligase family, glutamate ligase domain 352 439 4.6E-23 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC12D_RS13650 321cfd58982468f382531716b101fa23 514 PANTHER PTHR23135:SF4 17 510 8.9E-168 T 22-04-2016 RPIC12D_RS13650 321cfd58982468f382531716b101fa23 514 SUPERFAMILY SSF53244 352 508 5.04E-48 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC12D_RS13650 321cfd58982468f382531716b101fa23 514 PANTHER PTHR23135 17 510 8.9E-168 T 22-04-2016 RPIC12D_RS13650 321cfd58982468f382531716b101fa23 514 Gene3D G3DSA:3.90.190.20 356 501 1.7E-54 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC12D_RS13650 321cfd58982468f382531716b101fa23 514 SUPERFAMILY SSF53623 117 351 6.02E-75 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13650 321cfd58982468f382531716b101fa23 514 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 32 507 5.1E-147 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 RPIC12D_RS13650 321cfd58982468f382531716b101fa23 514 Gene3D G3DSA:3.40.1390.10 31 111 1.7E-14 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13650 321cfd58982468f382531716b101fa23 514 Pfam PF08245 Mur ligase middle domain 123 331 2.9E-53 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13650 321cfd58982468f382531716b101fa23 514 SUPERFAMILY SSF63418 31 111 5.23E-14 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13650 321cfd58982468f382531716b101fa23 514 Gene3D G3DSA:3.40.1190.10 116 355 9.4E-85 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC12D_RS13650 321cfd58982468f382531716b101fa23 514 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 14 507 34.162 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 RPIC12D_RS01395 072c56b0bfe40ddbe1aee3000a66024c 645 Pfam PF13432 Tetratricopeptide repeat 464 521 0.0033 T 22-04-2016 RPIC12D_RS01395 072c56b0bfe40ddbe1aee3000a66024c 645 Pfam PF13432 Tetratricopeptide repeat 538 590 0.006 T 22-04-2016 RPIC12D_RS01395 072c56b0bfe40ddbe1aee3000a66024c 645 Pfam PF13432 Tetratricopeptide repeat 335 403 0.0064 T 22-04-2016 RPIC12D_RS01395 072c56b0bfe40ddbe1aee3000a66024c 645 Pfam PF13432 Tetratricopeptide repeat 270 331 0.0065 T 22-04-2016 RPIC12D_RS01395 072c56b0bfe40ddbe1aee3000a66024c 645 SUPERFAMILY SSF48452 134 266 4.07E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS01395 072c56b0bfe40ddbe1aee3000a66024c 645 SUPERFAMILY SSF48452 230 438 1.86E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS01395 072c56b0bfe40ddbe1aee3000a66024c 645 PANTHER PTHR23083 43 58 6.0E-34 T 22-04-2016 RPIC12D_RS01395 072c56b0bfe40ddbe1aee3000a66024c 645 PANTHER PTHR23083 226 624 6.0E-34 T 22-04-2016 RPIC12D_RS01395 072c56b0bfe40ddbe1aee3000a66024c 645 SUPERFAMILY SSF48452 464 624 1.14E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS01395 072c56b0bfe40ddbe1aee3000a66024c 645 Gene3D G3DSA:1.25.40.10 386 624 6.0E-29 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS01395 072c56b0bfe40ddbe1aee3000a66024c 645 Gene3D G3DSA:1.25.40.10 168 385 5.4E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS01395 072c56b0bfe40ddbe1aee3000a66024c 645 SMART SM00028 590 623 44.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS01395 072c56b0bfe40ddbe1aee3000a66024c 645 SMART SM00028 331 364 200.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS01395 072c56b0bfe40ddbe1aee3000a66024c 645 SMART SM00028 297 330 26.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS01395 072c56b0bfe40ddbe1aee3000a66024c 645 SMART SM00028 522 556 92.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS01395 072c56b0bfe40ddbe1aee3000a66024c 645 SMART SM00028 488 521 47.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS01395 072c56b0bfe40ddbe1aee3000a66024c 645 SMART SM00028 230 263 28.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS15310 046c5f53cf91804604f7114a56a15ac5 280 Pfam PF01203 Type II secretion system (T2SS), protein N 61 275 4.6E-34 T 22-04-2016 IPR022792 Type II secretion system, protein N RPIC12D_RS04735 edfd516c810fa9840114a0aa148c0d60 197 PANTHER PTHR33221:SF1 2 159 1.1E-56 T 22-04-2016 RPIC12D_RS04735 edfd516c810fa9840114a0aa148c0d60 197 Pfam PF02082 Transcriptional regulator 1 83 2.5E-27 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type RPIC12D_RS04735 edfd516c810fa9840114a0aa148c0d60 197 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 137 7.0E-41 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type RPIC12D_RS04735 edfd516c810fa9840114a0aa148c0d60 197 PANTHER PTHR33221 2 159 1.1E-56 T 22-04-2016 RPIC12D_RS04735 edfd516c810fa9840114a0aa148c0d60 197 Gene3D G3DSA:1.10.10.10 1 144 6.3E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS04735 edfd516c810fa9840114a0aa148c0d60 197 SUPERFAMILY SSF46785 2 140 1.26E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS04735 edfd516c810fa9840114a0aa148c0d60 197 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 141 8.1E-65 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 RPIC12D_RS07835 2aa4122410aa07586c376382ae8e58fc 458 SUPERFAMILY SSF56935 96 238 2.56E-29 T 22-04-2016 RPIC12D_RS07835 2aa4122410aa07586c376382ae8e58fc 458 SUPERFAMILY SSF56935 271 458 2.56E-29 T 22-04-2016 RPIC12D_RS07835 2aa4122410aa07586c376382ae8e58fc 458 Pfam PF07396 Phosphate-selective porin O and P 107 445 8.7E-11 T 22-04-2016 IPR010870 Phosphate-selective porin O/P RPIC12D_RS07835 2aa4122410aa07586c376382ae8e58fc 458 Gene3D G3DSA:2.40.160.10 106 446 1.1E-16 T 22-04-2016 IPR023614 Porin domain RPIC12D_RS15990 557feb887d0e7eefeb474edf16aafc88 178 PANTHER PTHR11910:SF1 8 178 8.4E-39 T 22-04-2016 RPIC12D_RS15990 557feb887d0e7eefeb474edf16aafc88 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 3.6E-36 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RPIC12D_RS15990 557feb887d0e7eefeb474edf16aafc88 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.607 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RPIC12D_RS15990 557feb887d0e7eefeb474edf16aafc88 178 Gene3D G3DSA:1.10.520.20 2 105 4.9E-24 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RPIC12D_RS15990 557feb887d0e7eefeb474edf16aafc88 178 SUPERFAMILY SSF47928 3 105 4.18E-19 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RPIC12D_RS15990 557feb887d0e7eefeb474edf16aafc88 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 9.1E-48 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RPIC12D_RS15990 557feb887d0e7eefeb474edf16aafc88 178 PANTHER PTHR11910 8 178 8.4E-39 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RPIC12D_RS15990 557feb887d0e7eefeb474edf16aafc88 178 PRINTS PR00125 ATP synthase delta subunit signature 85 99 3.7E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RPIC12D_RS15990 557feb887d0e7eefeb474edf16aafc88 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.7E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RPIC12D_RS15990 557feb887d0e7eefeb474edf16aafc88 178 PRINTS PR00125 ATP synthase delta subunit signature 135 150 3.7E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RPIC12D_RS15990 557feb887d0e7eefeb474edf16aafc88 178 PRINTS PR00125 ATP synthase delta subunit signature 74 85 3.7E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RPIC12D_RS15990 557feb887d0e7eefeb474edf16aafc88 178 PRINTS PR00125 ATP synthase delta subunit signature 150 168 3.7E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RPIC12D_RS09970 dd6e713e00694b78711c7fc5ab0543d0 369 PANTHER PTHR32196 13 367 2.0E-66 T 22-04-2016 RPIC12D_RS09970 dd6e713e00694b78711c7fc5ab0543d0 369 Pfam PF02653 Branched-chain amino acid transport system / permease component 73 353 1.1E-40 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS09970 dd6e713e00694b78711c7fc5ab0543d0 369 PANTHER PTHR32196:SF22 13 367 2.0E-66 T 22-04-2016 RPIC12D_RS03500 60cc1e9570827522b2bee75ab56f9654 503 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 471 1.5E-157 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 RPIC12D_RS03500 60cc1e9570827522b2bee75ab56f9654 503 SUPERFAMILY SSF50475 3 338 1.02E-113 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RPIC12D_RS03500 60cc1e9570827522b2bee75ab56f9654 503 PANTHER PTHR30108 1 501 1.1E-240 T 22-04-2016 RPIC12D_RS03500 60cc1e9570827522b2bee75ab56f9654 503 Gene3D G3DSA:3.40.1670.10 353 470 4.8E-54 T 22-04-2016 RPIC12D_RS03500 60cc1e9570827522b2bee75ab56f9654 503 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 503 72.2 T 22-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 RPIC12D_RS03500 60cc1e9570827522b2bee75ab56f9654 503 Gene3D G3DSA:1.20.5.570 471 501 2.9E-17 T 22-04-2016 RPIC12D_RS03500 60cc1e9570827522b2bee75ab56f9654 503 PANTHER PTHR30108:SF1 1 501 1.1E-240 T 22-04-2016 RPIC12D_RS03500 60cc1e9570827522b2bee75ab56f9654 503 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 447 1.9E-164 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 RPIC12D_RS03500 60cc1e9570827522b2bee75ab56f9654 503 SUPERFAMILY SSF143968 339 501 1.44E-66 T 22-04-2016 RPIC12D_RS08035 a3a5dad6d1a5ba460b1cbbd5d3f8c315 344 PANTHER PTHR11938 9 337 1.5E-83 T 22-04-2016 RPIC12D_RS08035 a3a5dad6d1a5ba460b1cbbd5d3f8c315 344 Pfam PF01180 Dihydroorotate dehydrogenase 51 342 2.0E-85 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 RPIC12D_RS08035 a3a5dad6d1a5ba460b1cbbd5d3f8c315 344 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 83 102 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 RPIC12D_RS08035 a3a5dad6d1a5ba460b1cbbd5d3f8c315 344 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 6 343 4.9E-131 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS08035 a3a5dad6d1a5ba460b1cbbd5d3f8c315 344 PIRSF PIRSF000164 20 344 1.5E-92 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 RPIC12D_RS08035 a3a5dad6d1a5ba460b1cbbd5d3f8c315 344 Gene3D G3DSA:3.20.20.70 4 343 1.4E-126 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS08035 a3a5dad6d1a5ba460b1cbbd5d3f8c315 344 SUPERFAMILY SSF51395 6 342 9.89E-102 T 22-04-2016 RPIC12D_RS08035 a3a5dad6d1a5ba460b1cbbd5d3f8c315 344 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 5 342 51.397 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS04255 ca32be37d63f814b297447cd3b52fbfe 424 SUPERFAMILY SSF48452 40 93 2.28E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS04255 ca32be37d63f814b297447cd3b52fbfe 424 SUPERFAMILY SSF48452 155 237 2.28E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS04255 ca32be37d63f814b297447cd3b52fbfe 424 Gene3D G3DSA:1.25.40.10 40 273 4.2E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS04255 ca32be37d63f814b297447cd3b52fbfe 424 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 6 415 33.846 T 22-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 RPIC12D_RS04255 ca32be37d63f814b297447cd3b52fbfe 424 PANTHER PTHR23083 1 242 8.1E-14 T 22-04-2016 RPIC12D_RS04255 ca32be37d63f814b297447cd3b52fbfe 424 PANTHER PTHR23083 398 402 8.1E-14 T 22-04-2016 RPIC12D_RS04255 ca32be37d63f814b297447cd3b52fbfe 424 SMART SM00028 180 213 0.027 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS04255 ca32be37d63f814b297447cd3b52fbfe 424 SMART SM00028 214 247 320.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS04255 ca32be37d63f814b297447cd3b52fbfe 424 SMART SM00028 36 69 50.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS04255 ca32be37d63f814b297447cd3b52fbfe 424 Pfam PF13432 Tetratricopeptide repeat 43 90 4.8E-4 T 22-04-2016 RPIC12D_RS04255 ca32be37d63f814b297447cd3b52fbfe 424 Pfam PF13432 Tetratricopeptide repeat 186 236 1.6E-4 T 22-04-2016 RPIC12D_RS02290 0b1d9a42ed2ca681dca41c85eee73e9c 208 Pfam PF11136 Protein of unknown function (DUF2889) 13 137 2.7E-45 T 22-04-2016 IPR021312 Protein of unknown function DUF2889 RPIC12D_RS10445 4ec84b150bcd62e792d19445525d6792 422 SUPERFAMILY SSF51905 1 54 8.16E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10445 4ec84b150bcd62e792d19445525d6792 422 SUPERFAMILY SSF51905 107 273 8.16E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10445 4ec84b150bcd62e792d19445525d6792 422 SUPERFAMILY SSF51905 367 418 8.16E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10445 4ec84b150bcd62e792d19445525d6792 422 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 418 51.528 T 22-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 RPIC12D_RS10445 4ec84b150bcd62e792d19445525d6792 422 PANTHER PTHR13847:SF148 1 67 9.5E-73 T 22-04-2016 RPIC12D_RS10445 4ec84b150bcd62e792d19445525d6792 422 PANTHER PTHR13847:SF148 107 414 9.5E-73 T 22-04-2016 RPIC12D_RS10445 4ec84b150bcd62e792d19445525d6792 422 Pfam PF01266 FAD dependent oxidoreductase 3 405 1.1E-56 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIC12D_RS10445 4ec84b150bcd62e792d19445525d6792 422 SUPERFAMILY SSF54373 273 367 4.45E-11 T 22-04-2016 RPIC12D_RS10445 4ec84b150bcd62e792d19445525d6792 422 Gene3D G3DSA:3.30.9.10 136 190 1.3E-8 T 22-04-2016 RPIC12D_RS10445 4ec84b150bcd62e792d19445525d6792 422 Gene3D G3DSA:3.30.9.10 273 349 1.3E-8 T 22-04-2016 RPIC12D_RS10445 4ec84b150bcd62e792d19445525d6792 422 Gene3D G3DSA:3.50.50.60 367 420 3.1E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10445 4ec84b150bcd62e792d19445525d6792 422 Gene3D G3DSA:3.50.50.60 1 55 3.1E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10445 4ec84b150bcd62e792d19445525d6792 422 Gene3D G3DSA:3.50.50.60 191 272 3.1E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10445 4ec84b150bcd62e792d19445525d6792 422 Gene3D G3DSA:3.50.50.60 108 122 3.1E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC12D_RS10445 4ec84b150bcd62e792d19445525d6792 422 PANTHER PTHR13847 1 67 9.5E-73 T 22-04-2016 RPIC12D_RS10445 4ec84b150bcd62e792d19445525d6792 422 PANTHER PTHR13847 107 414 9.5E-73 T 22-04-2016 RPIC12D_RS12260 386499ce79f6ef646c742afc0a78d6cd 299 Gene3D G3DSA:1.25.40.10 207 290 9.9E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS12260 386499ce79f6ef646c742afc0a78d6cd 299 SUPERFAMILY SSF48452 160 276 2.02E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS12260 386499ce79f6ef646c742afc0a78d6cd 299 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 6 128 8.3E-30 T 22-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI RPIC12D_RS12260 386499ce79f6ef646c742afc0a78d6cd 299 Gene3D G3DSA:1.25.40.10 165 206 1.7E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS12260 386499ce79f6ef646c742afc0a78d6cd 299 SMART SM00028 170 203 0.026 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS12260 386499ce79f6ef646c742afc0a78d6cd 299 SMART SM00028 241 274 93.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS06815 d765f5b5940409e781815b990cb801c1 260 Pfam PF00588 SpoU rRNA Methylase family 116 251 6.6E-34 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RPIC12D_RS06815 d765f5b5940409e781815b990cb801c1 260 Gene3D G3DSA:3.40.1280.10 115 258 1.6E-47 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIC12D_RS06815 d765f5b5940409e781815b990cb801c1 260 PANTHER PTHR12029 24 258 2.8E-45 T 22-04-2016 RPIC12D_RS06815 d765f5b5940409e781815b990cb801c1 260 SUPERFAMILY SSF55315 2 104 6.12E-17 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like RPIC12D_RS06815 d765f5b5940409e781815b990cb801c1 260 SUPERFAMILY SSF75217 114 258 1.44E-42 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RPIC12D_RS06815 d765f5b5940409e781815b990cb801c1 260 Gene3D G3DSA:3.30.1330.30 3 103 3.6E-13 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like RPIC12D_RS16495 524427f8c4e218c57b768c05bd599256 143 SUPERFAMILY SSF55961 4 142 1.79E-24 T 22-04-2016 RPIC12D_RS16495 524427f8c4e218c57b768c05bd599256 143 Gene3D G3DSA:3.30.530.20 2 142 5.1E-49 T 22-04-2016 IPR023393 START-like domain RPIC12D_RS09520 c1a0bedc453de7985cfcf6e96aab5966 119 PANTHER PTHR11058:SF10 3 119 1.5E-63 T 22-04-2016 RPIC12D_RS09520 c1a0bedc453de7985cfcf6e96aab5966 119 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 2 119 20.243 T 22-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 RPIC12D_RS09520 c1a0bedc453de7985cfcf6e96aab5966 119 PANTHER PTHR11058 3 119 1.5E-63 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 RPIC12D_RS09520 c1a0bedc453de7985cfcf6e96aab5966 119 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 22 118 5.7E-37 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 RPIC12D_RS12890 b1f3ee173529bb7c7ae305ded2f13321 263 SUPERFAMILY SSF51735 234 263 2.22E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS12890 b1f3ee173529bb7c7ae305ded2f13321 263 SUPERFAMILY SSF51735 1 124 2.22E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS12890 b1f3ee173529bb7c7ae305ded2f13321 263 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 123 3.0E-37 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS12890 b1f3ee173529bb7c7ae305ded2f13321 263 PANTHER PTHR20836:SF0 1 263 8.0E-90 T 22-04-2016 RPIC12D_RS12890 b1f3ee173529bb7c7ae305ded2f13321 263 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 262 3.7E-90 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS12890 b1f3ee173529bb7c7ae305ded2f13321 263 Gene3D G3DSA:3.40.50.720 1 161 6.0E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS12890 b1f3ee173529bb7c7ae305ded2f13321 263 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 148 165 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS12890 b1f3ee173529bb7c7ae305ded2f13321 263 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 262 35.518 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS12890 b1f3ee173529bb7c7ae305ded2f13321 263 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 126 261 8.2E-43 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS12890 b1f3ee173529bb7c7ae305ded2f13321 263 SUPERFAMILY SSF55347 125 234 6.54E-36 T 22-04-2016 RPIC12D_RS12890 b1f3ee173529bb7c7ae305ded2f13321 263 PIRSF PIRSF000161 1 263 1.1E-81 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS12890 b1f3ee173529bb7c7ae305ded2f13321 263 PANTHER PTHR20836 1 263 8.0E-90 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC12D_RS16260 f2a03246aa78018d53638a093cf39aca 300 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 46 268 1.3E-115 T 22-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 RPIC12D_RS16260 f2a03246aa78018d53638a093cf39aca 300 SUPERFAMILY SSF52540 76 266 1.08E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16260 f2a03246aa78018d53638a093cf39aca 300 PANTHER PTHR34383 2 300 1.2E-203 T 22-04-2016 RPIC12D_RS16260 f2a03246aa78018d53638a093cf39aca 300 Gene3D G3DSA:3.40.50.300 42 281 5.2E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16260 f2a03246aa78018d53638a093cf39aca 300 PANTHER PTHR34383:SF1 2 300 1.2E-203 T 22-04-2016 RPIC12D_RS16260 f2a03246aa78018d53638a093cf39aca 300 PIRSF PIRSF028756 11 300 2.4E-135 T 22-04-2016 IPR016898 Polyphosphate kinase 2 RPIC12D_RS16260 f2a03246aa78018d53638a093cf39aca 300 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 47 269 4.7E-113 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related RPIC12D_RS15145 1261e0cdd26e1914f804ff6db3d48ea1 357 Pfam PF11209 Protein of unknown function (DUF2993) 83 349 8.6E-9 T 22-04-2016 IPR021373 Protein of unknown function DUF2993 RPIC12D_RS16730 eb3b7f4103f202bb7cc142f6909fe656 204 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 32 123 2.6E-14 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RPIC12D_RS16730 eb3b7f4103f202bb7cc142f6909fe656 204 SUPERFAMILY SSF50475 25 172 4.13E-21 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RPIC12D_RS16730 eb3b7f4103f202bb7cc142f6909fe656 204 Gene3D G3DSA:2.30.110.10 26 147 2.0E-21 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RPIC12D_RS16730 eb3b7f4103f202bb7cc142f6909fe656 204 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 10 204 3.7E-81 T 22-04-2016 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent RPIC12D_RS16730 eb3b7f4103f202bb7cc142f6909fe656 204 PANTHER PTHR30212 5 199 1.0E-67 T 22-04-2016 RPIC12D_RS16730 eb3b7f4103f202bb7cc142f6909fe656 204 PANTHER PTHR30212:SF4 5 199 1.0E-67 T 22-04-2016 RPIC12D_RS04450 5fc2dfc001941f2e7a8d86c737a01284 348 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 46 343 7.0E-114 T 22-04-2016 IPR017804 Methyltransferase EgtD-like RPIC12D_RS04450 5fc2dfc001941f2e7a8d86c737a01284 348 PIRSF PIRSF018005 10 347 1.0E-135 T 22-04-2016 IPR017804 Methyltransferase EgtD-like RPIC12D_RS04450 5fc2dfc001941f2e7a8d86c737a01284 348 Gene3D G3DSA:3.40.50.150 295 341 7.8E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS04450 5fc2dfc001941f2e7a8d86c737a01284 348 Gene3D G3DSA:3.40.50.150 104 235 7.8E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS04450 5fc2dfc001941f2e7a8d86c737a01284 348 PANTHER PTHR30468 1 341 8.9E-65 T 22-04-2016 RPIC12D_RS04450 5fc2dfc001941f2e7a8d86c737a01284 348 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 219 341 3.1E-41 T 22-04-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent RPIC12D_RS04450 5fc2dfc001941f2e7a8d86c737a01284 348 SUPERFAMILY SSF53335 281 336 3.14E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS04450 5fc2dfc001941f2e7a8d86c737a01284 348 SUPERFAMILY SSF53335 95 233 3.14E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS04450 5fc2dfc001941f2e7a8d86c737a01284 348 PANTHER PTHR30468:SF6 1 341 8.9E-65 T 22-04-2016 RPIC12D_RS08755 bebd4ca71e4c510859d60e8601cfebbd 219 Gene3D G3DSA:3.40.50.2300 1 126 2.7E-9 T 22-04-2016 RPIC12D_RS08755 bebd4ca71e4c510859d60e8601cfebbd 219 PANTHER PTHR26402 1 203 8.7E-26 T 22-04-2016 RPIC12D_RS08755 bebd4ca71e4c510859d60e8601cfebbd 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 4.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS08755 bebd4ca71e4c510859d60e8601cfebbd 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 4.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS08755 bebd4ca71e4c510859d60e8601cfebbd 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 4.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS08755 bebd4ca71e4c510859d60e8601cfebbd 219 SUPERFAMILY SSF46894 142 207 6.8E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS08755 bebd4ca71e4c510859d60e8601cfebbd 219 SMART SM00421 147 204 2.6E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS08755 bebd4ca71e4c510859d60e8601cfebbd 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 4.3E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS08755 bebd4ca71e4c510859d60e8601cfebbd 219 SUPERFAMILY SSF52172 1 124 5.12E-9 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS08755 bebd4ca71e4c510859d60e8601cfebbd 219 Gene3D G3DSA:1.10.10.10 139 206 7.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08755 bebd4ca71e4c510859d60e8601cfebbd 219 PANTHER PTHR26402:SF151 1 203 8.7E-26 T 22-04-2016 RPIC12D_RS03970 9065991f9511ae86ca1ca745a2ec42b9 568 Gene3D G3DSA:3.40.50.980 25 214 3.3E-39 T 22-04-2016 RPIC12D_RS03970 9065991f9511ae86ca1ca745a2ec42b9 568 SUPERFAMILY SSF56801 12 556 1.57E-152 T 22-04-2016 RPIC12D_RS03970 9065991f9511ae86ca1ca745a2ec42b9 568 Pfam PF00501 AMP-binding enzyme 29 458 1.1E-108 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC12D_RS03970 9065991f9511ae86ca1ca745a2ec42b9 568 Gene3D G3DSA:2.30.38.10 373 450 3.1E-27 T 22-04-2016 RPIC12D_RS03970 9065991f9511ae86ca1ca745a2ec42b9 568 Pfam PF13193 AMP-binding enzyme C-terminal domain 468 545 1.5E-20 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC12D_RS03970 9065991f9511ae86ca1ca745a2ec42b9 568 ProSitePatterns PS00455 Putative AMP-binding domain signature. 210 221 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC12D_RS03970 9065991f9511ae86ca1ca745a2ec42b9 568 Gene3D G3DSA:3.30.300.30 456 559 7.2E-29 T 22-04-2016 RPIC12D_RS03970 9065991f9511ae86ca1ca745a2ec42b9 568 Gene3D G3DSA:3.40.50.980 215 372 1.1E-44 T 22-04-2016 RPIC12D_RS03970 9065991f9511ae86ca1ca745a2ec42b9 568 PANTHER PTHR24096 1 554 1.3E-163 T 22-04-2016 RPIC12D_RS05330 b4528e24b640bfd182766b604a54cb95 300 SUPERFAMILY SSF56235 2 240 7.46E-31 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS05330 b4528e24b640bfd182766b604a54cb95 300 PIRSF PIRSF009120 1 250 2.5E-119 T 22-04-2016 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 RPIC12D_RS05330 b4528e24b640bfd182766b604a54cb95 300 Gene3D G3DSA:3.60.20.10 2 205 6.6E-11 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS16995 cc1c9af2a81436db8411c1a205ad726a 448 PANTHER PTHR24423 183 434 7.2E-17 T 22-04-2016 RPIC12D_RS16995 cc1c9af2a81436db8411c1a205ad726a 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 315 428 4.0E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16995 cc1c9af2a81436db8411c1a205ad726a 448 SMART SM00387 312 431 1.2E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16995 cc1c9af2a81436db8411c1a205ad726a 448 Gene3D G3DSA:3.30.565.10 290 429 9.1E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16995 cc1c9af2a81436db8411c1a205ad726a 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 5.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16995 cc1c9af2a81436db8411c1a205ad726a 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 5.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16995 cc1c9af2a81436db8411c1a205ad726a 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 5.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16995 cc1c9af2a81436db8411c1a205ad726a 448 SUPERFAMILY SSF55874 291 432 1.44E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS02015 7e74d8df714c5cb0e6300d4c943f6123 357 SUPERFAMILY SSF56112 17 341 3.7E-52 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC12D_RS02015 7e74d8df714c5cb0e6300d4c943f6123 357 PANTHER PTHR33540:SF1 18 351 8.7E-103 T 22-04-2016 RPIC12D_RS02015 7e74d8df714c5cb0e6300d4c943f6123 357 PANTHER PTHR33540 18 351 8.7E-103 T 22-04-2016 RPIC12D_RS02015 7e74d8df714c5cb0e6300d4c943f6123 357 Gene3D G3DSA:3.30.200.20 12 109 3.5E-31 T 22-04-2016 RPIC12D_RS02015 7e74d8df714c5cb0e6300d4c943f6123 357 Gene3D G3DSA:3.90.1200.10 127 346 2.9E-72 T 22-04-2016 RPIC12D_RS02015 7e74d8df714c5cb0e6300d4c943f6123 357 Pfam PF01636 Phosphotransferase enzyme family 37 270 6.4E-30 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase RPIC12D_RS08495 34036b6da2d0a359fe033cf8ac5717b7 740 Pfam PF11678 Protein of unknown function (DUF3274) 613 665 1.3E-6 T 22-04-2016 IPR021692 Protein of unknown function DUF3274 RPIC12D_RS08495 34036b6da2d0a359fe033cf8ac5717b7 740 Gene3D G3DSA:3.40.50.1820 79 100 4.4E-4 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS08495 34036b6da2d0a359fe033cf8ac5717b7 740 Gene3D G3DSA:3.40.50.1820 13 30 4.4E-4 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS08495 34036b6da2d0a359fe033cf8ac5717b7 740 Gene3D G3DSA:3.40.50.1820 173 324 4.4E-4 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS11725 a9228a463b7cf528b0147f2a3277e550 190 Gene3D G3DSA:3.40.50.620 38 152 6.1E-21 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS11725 a9228a463b7cf528b0147f2a3277e550 190 Pfam PF02698 DUF218 domain 47 181 8.8E-21 T 22-04-2016 IPR003848 Domain of unknown function DUF218 RPIC12D_RS11725 a9228a463b7cf528b0147f2a3277e550 190 PANTHER PTHR30336 5 151 1.1E-20 T 22-04-2016 RPIC12D_RS07245 7f7cc7c457a447395a06778fbc368e0e 215 SUPERFAMILY SSF52016 1 203 2.55E-60 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RPIC12D_RS07245 7f7cc7c457a447395a06778fbc368e0e 215 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 41.965 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07245 7f7cc7c457a447395a06778fbc368e0e 215 Gene3D G3DSA:3.20.19.10 1 202 5.4E-48 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RPIC12D_RS07245 7f7cc7c457a447395a06778fbc368e0e 215 PANTHER PTHR11670 1 208 1.3E-97 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07245 7f7cc7c457a447395a06778fbc368e0e 215 Pfam PF00694 Aconitase C-terminal domain 1 131 6.6E-33 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS07245 7f7cc7c457a447395a06778fbc368e0e 215 PANTHER PTHR11670:SF27 1 208 1.3E-97 T 22-04-2016 RPIC12D_RS07245 7f7cc7c457a447395a06778fbc368e0e 215 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 1.8E-77 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC12D_RS00010 6ecb4e36aed5b8ea41cfcac261ec78f5 371 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 251 370 6.5E-35 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS00010 6ecb4e36aed5b8ea41cfcac261ec78f5 371 Gene3D G3DSA:3.10.150.10 254 371 8.0E-39 T 22-04-2016 RPIC12D_RS00010 6ecb4e36aed5b8ea41cfcac261ec78f5 371 SUPERFAMILY SSF55979 5 117 5.83E-21 T 22-04-2016 RPIC12D_RS00010 6ecb4e36aed5b8ea41cfcac261ec78f5 371 SMART SM00480 18 367 5.5E-114 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS00010 6ecb4e36aed5b8ea41cfcac261ec78f5 371 SUPERFAMILY SSF55979 250 371 3.73E-37 T 22-04-2016 RPIC12D_RS00010 6ecb4e36aed5b8ea41cfcac261ec78f5 371 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 248 1.8E-33 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS00010 6ecb4e36aed5b8ea41cfcac261ec78f5 371 SUPERFAMILY SSF55979 128 249 3.37E-27 T 22-04-2016 RPIC12D_RS00010 6ecb4e36aed5b8ea41cfcac261ec78f5 371 Gene3D G3DSA:3.10.150.10 5 119 2.0E-24 T 22-04-2016 RPIC12D_RS00010 6ecb4e36aed5b8ea41cfcac261ec78f5 371 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 7 119 6.6E-28 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS00010 6ecb4e36aed5b8ea41cfcac261ec78f5 371 Gene3D G3DSA:3.10.150.10 127 253 1.5E-37 T 22-04-2016 RPIC12D_RS00010 6ecb4e36aed5b8ea41cfcac261ec78f5 371 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 6 370 2.7E-99 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS00010 6ecb4e36aed5b8ea41cfcac261ec78f5 371 PIRSF PIRSF000804 1 371 1.0E-112 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC12D_RS00010 6ecb4e36aed5b8ea41cfcac261ec78f5 371 PANTHER PTHR30478 4 371 7.0E-117 T 22-04-2016 RPIC12D_RS09420 0886fa513b660048ec046dbdc941d03a 159 SUPERFAMILY SSF54637 5 155 5.44E-38 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS09420 0886fa513b660048ec046dbdc941d03a 159 Pfam PF01575 MaoC like domain 13 117 8.4E-27 T 22-04-2016 IPR002539 MaoC-like domain RPIC12D_RS09420 0886fa513b660048ec046dbdc941d03a 159 Gene3D G3DSA:3.10.129.10 7 154 5.7E-36 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS09420 0886fa513b660048ec046dbdc941d03a 159 PANTHER PTHR13078 3 154 1.7E-38 T 22-04-2016 RPIC12D_RS01405 30845c4c51bc4fd1f398be5cc7ca8dd2 647 Gene3D G3DSA:3.40.50.300 208 316 1.8E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01405 30845c4c51bc4fd1f398be5cc7ca8dd2 647 Gene3D G3DSA:3.40.50.300 57 104 1.8E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01405 30845c4c51bc4fd1f398be5cc7ca8dd2 647 Pfam PF00350 Dynamin family 58 272 6.7E-15 T 22-04-2016 IPR022812 Dynamin superfamily RPIC12D_RS01405 30845c4c51bc4fd1f398be5cc7ca8dd2 647 SUPERFAMILY SSF52540 181 314 4.63E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01405 30845c4c51bc4fd1f398be5cc7ca8dd2 647 SUPERFAMILY SSF52540 392 453 4.63E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01405 30845c4c51bc4fd1f398be5cc7ca8dd2 647 SUPERFAMILY SSF52540 34 119 4.63E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05735 f9f7753123af3f2a956586e9779d31e7 251 SUPERFAMILY SSF64167 1 249 1.44E-84 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RPIC12D_RS05735 f9f7753123af3f2a956586e9779d31e7 251 PANTHER PTHR30457 1 248 3.2E-86 T 22-04-2016 RPIC12D_RS05735 f9f7753123af3f2a956586e9779d31e7 251 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 251 39.206 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RPIC12D_RS05735 f9f7753123af3f2a956586e9779d31e7 251 Pfam PF01975 Survival protein SurE 3 187 2.4E-57 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RPIC12D_RS05735 f9f7753123af3f2a956586e9779d31e7 251 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 237 3.2E-66 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RPIC12D_RS05735 f9f7753123af3f2a956586e9779d31e7 251 Gene3D G3DSA:3.40.1210.10 1 249 2.2E-87 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RPIC12D_RS02050 d7bbbdd5348c15a0084a492f12c34126 292 PANTHER PTHR30399 56 282 3.1E-47 T 22-04-2016 RPIC12D_RS02050 d7bbbdd5348c15a0084a492f12c34126 292 Pfam PF01863 Protein of unknown function DUF45 75 284 3.9E-62 T 22-04-2016 IPR002725 Protein of unknown function DUF45 RPIC12D_RS00415 b665c63017176bb89ef81d4e6c4dbaf6 151 PANTHER PTHR11260 10 118 9.5E-36 T 22-04-2016 RPIC12D_RS00415 b665c63017176bb89ef81d4e6c4dbaf6 151 Gene3D G3DSA:1.20.1050.10 6 117 1.9E-48 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS00415 b665c63017176bb89ef81d4e6c4dbaf6 151 PANTHER PTHR11260:SF157 10 118 9.5E-36 T 22-04-2016 RPIC12D_RS00415 b665c63017176bb89ef81d4e6c4dbaf6 151 SUPERFAMILY SSF47616 7 121 2.32E-38 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC12D_RS00415 b665c63017176bb89ef81d4e6c4dbaf6 151 Pfam PF00043 Glutathione S-transferase, C-terminal domain 27 113 1.2E-10 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RPIC12D_RS03320 78ad993b3e17583dda560e88c5ba5755 372 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 44 58 1.6E-7 T 22-04-2016 RPIC12D_RS03320 78ad993b3e17583dda560e88c5ba5755 372 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 133 157 1.6E-7 T 22-04-2016 RPIC12D_RS03320 78ad993b3e17583dda560e88c5ba5755 372 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 104 116 1.6E-7 T 22-04-2016 RPIC12D_RS03320 78ad993b3e17583dda560e88c5ba5755 372 SUPERFAMILY SSF53335 18 181 5.74E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS03320 78ad993b3e17583dda560e88c5ba5755 372 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 107 113 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RPIC12D_RS03320 78ad993b3e17583dda560e88c5ba5755 372 Gene3D G3DSA:3.40.50.150 11 176 7.5E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS10060 6d6906aa74184e9775a92adeceb3b9d3 489 SUPERFAMILY SSF50249 39 125 3.43E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS10060 6d6906aa74184e9775a92adeceb3b9d3 489 PANTHER PTHR30001 1 489 8.4E-188 T 22-04-2016 RPIC12D_RS10060 6d6906aa74184e9775a92adeceb3b9d3 489 SMART SM00316 37 119 1.6E-5 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC12D_RS10060 6d6906aa74184e9775a92adeceb3b9d3 489 Pfam PF10150 Ribonuclease E/G family 121 392 7.0E-102 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 RPIC12D_RS10060 6d6906aa74184e9775a92adeceb3b9d3 489 Gene3D G3DSA:2.40.50.140 31 125 2.0E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS10060 6d6906aa74184e9775a92adeceb3b9d3 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 3.7E-154 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 RPIC12D_RS25270 3113105579f45ae1c7ec20675a667be4 73 Gene3D G3DSA:3.90.79.10 32 73 1.9E-4 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS25270 3113105579f45ae1c7ec20675a667be4 73 SUPERFAMILY SSF55811 31 73 3.32E-5 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS11125 b0338f913e341f463cc419c55e772d84 233 Pfam PF04402 Protein of unknown function (DUF541) 33 226 4.3E-29 T 22-04-2016 IPR007497 Protein of unknown function DUF541 RPIC12D_RS21520 573f37fb2584aaba8ab032fa9a94ab85 92 PRINTS PR00108 Thymidylate synthase family signature 69 86 9.6E-28 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS21520 573f37fb2584aaba8ab032fa9a94ab85 92 PRINTS PR00108 Thymidylate synthase family signature 31 57 9.6E-28 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS21520 573f37fb2584aaba8ab032fa9a94ab85 92 PRINTS PR00108 Thymidylate synthase family signature 13 28 9.6E-28 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS21520 573f37fb2584aaba8ab032fa9a94ab85 92 SUPERFAMILY SSF55831 1 92 4.97E-47 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS21520 573f37fb2584aaba8ab032fa9a94ab85 92 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 1 92 7.8E-55 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS21520 573f37fb2584aaba8ab032fa9a94ab85 92 Pfam PF00303 Thymidylate synthase 1 92 1.9E-44 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS21520 573f37fb2584aaba8ab032fa9a94ab85 92 Gene3D G3DSA:3.30.572.10 1 92 5.4E-51 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC12D_RS21520 573f37fb2584aaba8ab032fa9a94ab85 92 PANTHER PTHR11548 1 92 5.3E-69 T 22-04-2016 RPIC12D_RS09640 0e19946efd0d1b6c5de48455fa3d0d8b 239 SUPERFAMILY SSF46689 8 77 9.23E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS09640 0e19946efd0d1b6c5de48455fa3d0d8b 239 Pfam PF13972 Bacterial transcriptional repressor 66 213 1.3E-42 T 22-04-2016 IPR025722 Bacterial transcriptional repressor TetR RPIC12D_RS09640 0e19946efd0d1b6c5de48455fa3d0d8b 239 PANTHER PTHR30055:SF30 1 172 4.0E-39 T 22-04-2016 RPIC12D_RS09640 0e19946efd0d1b6c5de48455fa3d0d8b 239 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 1.2E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS09640 0e19946efd0d1b6c5de48455fa3d0d8b 239 Gene3D G3DSA:1.10.357.10 10 187 2.8E-28 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC12D_RS09640 0e19946efd0d1b6c5de48455fa3d0d8b 239 PANTHER PTHR30055 1 172 4.0E-39 T 22-04-2016 RPIC12D_RS09640 0e19946efd0d1b6c5de48455fa3d0d8b 239 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 9.1E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS09640 0e19946efd0d1b6c5de48455fa3d0d8b 239 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 9.1E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS00195 7b44c2d861be9e1224655bbf3989b1c4 251 PANTHER PTHR30336:SF1 3 235 3.1E-35 T 22-04-2016 RPIC12D_RS00195 7b44c2d861be9e1224655bbf3989b1c4 251 Pfam PF02698 DUF218 domain 69 229 3.4E-28 T 22-04-2016 IPR003848 Domain of unknown function DUF218 RPIC12D_RS00195 7b44c2d861be9e1224655bbf3989b1c4 251 PANTHER PTHR30336 3 235 3.1E-35 T 22-04-2016 RPIC12D_RS00195 7b44c2d861be9e1224655bbf3989b1c4 251 Gene3D G3DSA:3.40.50.620 68 197 2.9E-23 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS14570 d12832bf18896950795e1e7779b241f6 331 Pfam PF00174 Oxidoreductase molybdopterin binding domain 106 261 7.1E-29 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RPIC12D_RS14570 d12832bf18896950795e1e7779b241f6 331 PANTHER PTHR19372 14 326 4.4E-132 T 22-04-2016 RPIC12D_RS14570 d12832bf18896950795e1e7779b241f6 331 Gene3D G3DSA:3.90.420.10 72 315 1.0E-67 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RPIC12D_RS14570 d12832bf18896950795e1e7779b241f6 331 SUPERFAMILY SSF56524 72 327 8.11E-87 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RPIC12D_RS14570 d12832bf18896950795e1e7779b241f6 331 PANTHER PTHR19372:SF1 14 326 4.4E-132 T 22-04-2016 RPIC12D_RS14570 d12832bf18896950795e1e7779b241f6 331 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 10 331 58.269 T 22-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 RPIC12D_RS12420 ec45d8adf893d9045d20719fd196a49b 352 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 342 25.619 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RPIC12D_RS12420 ec45d8adf893d9045d20719fd196a49b 352 PANTHER PTHR34824 1 352 1.5E-90 T 22-04-2016 RPIC12D_RS12420 ec45d8adf893d9045d20719fd196a49b 352 PIRSF PIRSF005485 1 352 1.3E-102 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RPIC12D_RS12420 ec45d8adf893d9045d20719fd196a49b 352 SUPERFAMILY SSF55781 70 83 6.08E-58 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS12420 ec45d8adf893d9045d20719fd196a49b 352 SUPERFAMILY SSF55781 115 351 6.08E-58 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS12420 ec45d8adf893d9045d20719fd196a49b 352 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 2 347 2.7E-90 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RPIC12D_RS12420 ec45d8adf893d9045d20719fd196a49b 352 Gene3D G3DSA:3.30.450.40 189 351 6.9E-38 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS12420 ec45d8adf893d9045d20719fd196a49b 352 SUPERFAMILY SSF46785 1 80 7.89E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12420 ec45d8adf893d9045d20719fd196a49b 352 Pfam PF01628 HrcA protein C terminal domain 118 335 9.3E-55 T 22-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 RPIC12D_RS12420 ec45d8adf893d9045d20719fd196a49b 352 Gene3D G3DSA:1.10.10.10 1 82 1.4E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16580 f659c3788e5dc8effd5bcb881f9c718c 218 Pfam PF14113 Type VI secretion system (T6SS), amidase effector protein 4 60 215 9.1E-27 T 22-04-2016 IPR025562 Type VI secretion system (T6SS), amidase effector protein 4 RPIC12D_RS16205 3a22f212a7eb0316abd674f66df65e80 315 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 175 293 6.8E-21 T 22-04-2016 IPR019262 Domain of unknown function DUF2272 RPIC12D_RS16740 539ff9b445e5b96614b64bfebbe65d15 650 SUPERFAMILY SSF53955 476 637 8.78E-45 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC12D_RS16740 539ff9b445e5b96614b64bfebbe65d15 650 PANTHER PTHR21666 463 629 1.4E-39 T 22-04-2016 RPIC12D_RS16740 539ff9b445e5b96614b64bfebbe65d15 650 Pfam PF14718 Soluble lytic murein transglycosylase L domain 404 464 8.0E-7 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 RPIC12D_RS16740 539ff9b445e5b96614b64bfebbe65d15 650 Pfam PF01464 Transglycosylase SLT domain 482 587 6.1E-20 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RPIC12D_RS16740 539ff9b445e5b96614b64bfebbe65d15 650 Gene3D G3DSA:1.10.1240.20 404 460 3.4E-6 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 RPIC12D_RS16740 539ff9b445e5b96614b64bfebbe65d15 650 Gene3D G3DSA:1.10.530.10 471 634 1.2E-44 T 22-04-2016 RPIC12D_RS16740 539ff9b445e5b96614b64bfebbe65d15 650 SUPERFAMILY SSF48435 45 474 1.11E-105 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 RPIC12D_RS16740 539ff9b445e5b96614b64bfebbe65d15 650 Gene3D G3DSA:1.25.20.10 242 385 9.8E-38 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 RPIC12D_RS16740 539ff9b445e5b96614b64bfebbe65d15 650 Gene3D G3DSA:1.25.20.10 45 241 5.3E-45 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 RPIC12D_RS05120 39cd6e30f4f1f7c5a02ca51df257af54 292 Pfam PF12327 FtsZ family, C-terminal domain 195 289 8.7E-11 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal RPIC12D_RS05120 39cd6e30f4f1f7c5a02ca51df257af54 292 SMART SM00865 180 292 0.002 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RPIC12D_RS05120 39cd6e30f4f1f7c5a02ca51df257af54 292 Gene3D G3DSA:3.30.1330.20 180 289 1.8E-16 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RPIC12D_RS05120 39cd6e30f4f1f7c5a02ca51df257af54 292 SUPERFAMILY SSF55307 180 290 5.26E-15 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal RPIC12D_RS09475 5d91f301b7f8d59a0f64491579ec963a 210 PANTHER PTHR33269:SF1 1 196 5.8E-60 T 22-04-2016 RPIC12D_RS09475 5d91f301b7f8d59a0f64491579ec963a 210 PANTHER PTHR33269 1 196 5.8E-60 T 22-04-2016 RPIC12D_RS09475 5d91f301b7f8d59a0f64491579ec963a 210 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 165 1.1E-35 T 22-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 RPIC12D_RS19295 9f52831785a3205077cf92442b0828c1 119 Gene3D G3DSA:3.40.718.10 1 119 5.3E-49 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RPIC12D_RS19295 9f52831785a3205077cf92442b0828c1 119 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 1 119 1.4E-44 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RPIC12D_RS19295 9f52831785a3205077cf92442b0828c1 119 PANTHER PTHR30004:SF5 1 118 1.1E-60 T 22-04-2016 RPIC12D_RS19295 9f52831785a3205077cf92442b0828c1 119 SUPERFAMILY SSF53659 1 118 2.67E-34 T 22-04-2016 RPIC12D_RS19295 9f52831785a3205077cf92442b0828c1 119 PANTHER PTHR30004 1 118 1.1E-60 T 22-04-2016 RPIC12D_RS11050 cc6cb41fc206861ea16445ae1dfc2771 498 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 263 447 4.9E-60 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 RPIC12D_RS11050 cc6cb41fc206861ea16445ae1dfc2771 498 PANTHER PTHR21343:SF1 1 494 1.4E-226 T 22-04-2016 RPIC12D_RS11050 cc6cb41fc206861ea16445ae1dfc2771 498 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 17 237 1.2E-29 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RPIC12D_RS11050 cc6cb41fc206861ea16445ae1dfc2771 498 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 497 214.604 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 RPIC12D_RS11050 cc6cb41fc206861ea16445ae1dfc2771 498 SUPERFAMILY SSF52540 16 249 9.75E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11050 cc6cb41fc206861ea16445ae1dfc2771 498 SUPERFAMILY SSF52317 264 456 8.58E-39 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS11050 cc6cb41fc206861ea16445ae1dfc2771 498 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 17 489 3.2E-145 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 RPIC12D_RS11050 cc6cb41fc206861ea16445ae1dfc2771 498 Gene3D G3DSA:3.40.50.300 16 250 1.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11050 cc6cb41fc206861ea16445ae1dfc2771 498 PANTHER PTHR21343 1 494 1.4E-226 T 22-04-2016 RPIC12D_RS11050 cc6cb41fc206861ea16445ae1dfc2771 498 Gene3D G3DSA:3.40.50.880 262 456 2.3E-31 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC12D_RS21565 f14dabfc99e3b30eca5580f0d97e72b0 190 SMART SM00382 5 190 1.9E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS21565 f14dabfc99e3b30eca5580f0d97e72b0 190 SUPERFAMILY SSF52540 1 190 1.62E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS21565 f14dabfc99e3b30eca5580f0d97e72b0 190 Gene3D G3DSA:3.40.50.300 1 189 3.4E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS21565 f14dabfc99e3b30eca5580f0d97e72b0 190 PANTHER PTHR19211 1 190 1.4E-68 T 22-04-2016 RPIC12D_RS21565 f14dabfc99e3b30eca5580f0d97e72b0 190 Pfam PF00005 ABC transporter 1 162 5.7E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS14990 797b5175963bd6139667a7a9da7ed62e 498 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 359 379 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RPIC12D_RS14990 797b5175963bd6139667a7a9da7ed62e 498 SUPERFAMILY SSF53067 252 490 1.51E-80 T 22-04-2016 RPIC12D_RS14990 797b5175963bd6139667a7a9da7ed62e 498 PANTHER PTHR10196 1 487 1.8E-231 T 22-04-2016 RPIC12D_RS14990 797b5175963bd6139667a7a9da7ed62e 498 Hamap MF_00186 Glycerol kinase [glpK]. 1 494 56.485 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RPIC12D_RS14990 797b5175963bd6139667a7a9da7ed62e 498 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 133 145 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RPIC12D_RS14990 797b5175963bd6139667a7a9da7ed62e 498 Gene3D G3DSA:3.30.420.40 251 490 1.0E-96 T 22-04-2016 RPIC12D_RS14990 797b5175963bd6139667a7a9da7ed62e 498 SUPERFAMILY SSF53067 3 252 1.1E-94 T 22-04-2016 RPIC12D_RS14990 797b5175963bd6139667a7a9da7ed62e 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 249 1.0E-78 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RPIC12D_RS14990 797b5175963bd6139667a7a9da7ed62e 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 447 8.6E-63 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RPIC12D_RS14990 797b5175963bd6139667a7a9da7ed62e 498 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 2 489 1.3E-214 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RPIC12D_RS14990 797b5175963bd6139667a7a9da7ed62e 498 PANTHER PTHR10196:SF69 1 487 1.8E-231 T 22-04-2016 RPIC12D_RS14990 797b5175963bd6139667a7a9da7ed62e 498 PIRSF PIRSF000538 1 496 1.5E-172 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RPIC12D_RS14990 797b5175963bd6139667a7a9da7ed62e 498 Gene3D G3DSA:3.30.420.40 1 250 2.7E-103 T 22-04-2016 RPIC12D_RS12430 86ca26b68d3388619e7d809cc9f9d972 568 Gene3D G3DSA:3.40.50.300 1 205 8.5E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12430 86ca26b68d3388619e7d809cc9f9d972 568 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 548 1.3E-149 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RPIC12D_RS12430 86ca26b68d3388619e7d809cc9f9d972 568 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 504 6.4E-19 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal RPIC12D_RS12430 86ca26b68d3388619e7d809cc9f9d972 568 SUPERFAMILY SSF52540 1 216 6.29E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12430 86ca26b68d3388619e7d809cc9f9d972 568 SUPERFAMILY SSF52540 287 504 3.75E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12430 86ca26b68d3388619e7d809cc9f9d972 568 SUPERFAMILY SSF52540 3 50 3.75E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12430 86ca26b68d3388619e7d809cc9f9d972 568 Gene3D G3DSA:3.40.50.300 339 350 3.2E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12430 86ca26b68d3388619e7d809cc9f9d972 568 Gene3D G3DSA:3.40.50.300 427 507 3.2E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12430 86ca26b68d3388619e7d809cc9f9d972 568 PANTHER PTHR11059 2 557 2.0E-152 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RPIC12D_RS12430 86ca26b68d3388619e7d809cc9f9d972 568 PIRSF PIRSF003128 1 553 7.7E-156 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RPIC12D_RS24320 50eed26f2aca1dbf0e11d080dc4a4dba 135 Pfam PF04185 Phosphoesterase family 1 127 1.5E-24 T 22-04-2016 IPR007312 Phosphoesterase GO:0016788 RPIC12D_RS24320 50eed26f2aca1dbf0e11d080dc4a4dba 135 PANTHER PTHR31956 1 122 9.6E-35 T 22-04-2016 RPIC12D_RS24320 50eed26f2aca1dbf0e11d080dc4a4dba 135 PANTHER PTHR31956:SF1 1 122 9.6E-35 T 22-04-2016 RPIC12D_RS07050 7e51cca9b4b602cf0bf1191ff1b45c61 623 Gene3D G3DSA:1.50.10.10 237 613 6.8E-85 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 RPIC12D_RS07050 7e51cca9b4b602cf0bf1191ff1b45c61 623 PANTHER PTHR31616 2 620 1.3E-186 T 22-04-2016 RPIC12D_RS07050 7e51cca9b4b602cf0bf1191ff1b45c61 623 PANTHER PTHR31616:SF0 2 620 1.3E-186 T 22-04-2016 RPIC12D_RS07050 7e51cca9b4b602cf0bf1191ff1b45c61 623 Pfam PF00723 Glycosyl hydrolases family 15 241 552 3.8E-60 T 22-04-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 RPIC12D_RS07050 7e51cca9b4b602cf0bf1191ff1b45c61 623 SUPERFAMILY SSF48208 223 609 6.8E-108 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RPIC12D_RS05740 b0ad69e4430d6792be364597e8e59a39 314 SUPERFAMILY SSF53335 110 310 4.65E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS05740 b0ad69e4430d6792be364597e8e59a39 314 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 231 246 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RPIC12D_RS05740 b0ad69e4430d6792be364597e8e59a39 314 PANTHER PTHR11579 94 309 3.7E-59 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RPIC12D_RS05740 b0ad69e4430d6792be364597e8e59a39 314 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 95 313 32.891 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RPIC12D_RS05740 b0ad69e4430d6792be364597e8e59a39 314 Gene3D G3DSA:3.40.50.150 107 312 3.1E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS05740 b0ad69e4430d6792be364597e8e59a39 314 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 102 311 7.1E-52 T 22-04-2016 RPIC12D_RS05740 b0ad69e4430d6792be364597e8e59a39 314 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 97 312 7.1E-54 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RPIC12D_RS04180 83656802e9bc5d5c1e118c884119b921 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 192 1.6E-29 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS04180 83656802e9bc5d5c1e118c884119b921 229 Gene3D G3DSA:3.40.50.1000 10 26 6.9E-41 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS04180 83656802e9bc5d5c1e118c884119b921 229 Gene3D G3DSA:3.40.50.1000 90 223 6.9E-41 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS04180 83656802e9bc5d5c1e118c884119b921 229 SUPERFAMILY SSF56784 12 223 2.17E-54 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS04180 83656802e9bc5d5c1e118c884119b921 229 PANTHER PTHR18901 12 223 1.0E-84 T 22-04-2016 RPIC12D_RS04180 83656802e9bc5d5c1e118c884119b921 229 PANTHER PTHR18901:SF24 12 223 1.0E-84 T 22-04-2016 RPIC12D_RS04180 83656802e9bc5d5c1e118c884119b921 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 93 187 5.4E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS04180 83656802e9bc5d5c1e118c884119b921 229 Gene3D G3DSA:1.10.150.240 27 89 6.2E-7 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RPIC12D_RS04180 83656802e9bc5d5c1e118c884119b921 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 93 191 1.8E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC12D_RS04180 83656802e9bc5d5c1e118c884119b921 229 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 13 223 9.1E-52 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 RPIC12D_RS10715 15ca204db6e2de357e1254caa07c9610 261 Pfam PF14023 Protein of unknown function (DUF4239) 44 246 9.0E-8 T 22-04-2016 IPR025333 Protein of unknown function DUF4239 RPIC12D_RS01920 f1c31e13f5dd9008e3ead0f42c067c3c 384 SUPERFAMILY SSF53067 74 119 8.2E-22 T 22-04-2016 RPIC12D_RS01920 f1c31e13f5dd9008e3ead0f42c067c3c 384 SUPERFAMILY SSF53067 153 357 8.2E-22 T 22-04-2016 RPIC12D_RS01920 f1c31e13f5dd9008e3ead0f42c067c3c 384 SUPERFAMILY SSF53067 13 47 8.2E-22 T 22-04-2016 RPIC12D_RS01920 f1c31e13f5dd9008e3ead0f42c067c3c 384 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 12 384 40.438 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 RPIC12D_RS01920 f1c31e13f5dd9008e3ead0f42c067c3c 384 Gene3D G3DSA:3.30.420.40 155 343 6.9E-70 T 22-04-2016 RPIC12D_RS01920 f1c31e13f5dd9008e3ead0f42c067c3c 384 Pfam PF03702 Uncharacterised protein family (UPF0075) 13 384 1.9E-137 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 RPIC12D_RS01920 f1c31e13f5dd9008e3ead0f42c067c3c 384 PANTHER PTHR30605 6 383 5.8E-140 T 22-04-2016 RPIC12D_RS13845 541e4e6cf304ab2c1152bdd54fad956b 263 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 38 251 1.8E-70 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 RPIC12D_RS13845 541e4e6cf304ab2c1152bdd54fad956b 263 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 36 258 37.219 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 RPIC12D_RS13845 541e4e6cf304ab2c1152bdd54fad956b 263 Pfam PF03167 Uracil DNA glycosylase superfamily 84 246 3.8E-22 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC12D_RS13845 541e4e6cf304ab2c1152bdd54fad956b 263 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 87 96 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 RPIC12D_RS13845 541e4e6cf304ab2c1152bdd54fad956b 263 Gene3D G3DSA:3.40.470.10 28 257 3.8E-86 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC12D_RS13845 541e4e6cf304ab2c1152bdd54fad956b 263 PANTHER PTHR11264 28 260 5.3E-107 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 RPIC12D_RS13845 541e4e6cf304ab2c1152bdd54fad956b 263 SUPERFAMILY SSF52141 35 257 5.05E-77 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC12D_RS13845 541e4e6cf304ab2c1152bdd54fad956b 263 SMART SM00987 79 247 3.2E-35 T 22-04-2016 RPIC12D_RS13845 541e4e6cf304ab2c1152bdd54fad956b 263 SMART SM00986 79 247 3.2E-35 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC12D_RS02030 069e13407e4bb91d21bc806e63b6704d 338 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 332 5.0E-120 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RPIC12D_RS02030 069e13407e4bb91d21bc806e63b6704d 338 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 40 328 5.3E-104 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RPIC12D_RS02030 069e13407e4bb91d21bc806e63b6704d 338 Gene3D G3DSA:3.40.718.10 2 335 1.5E-126 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RPIC12D_RS02030 069e13407e4bb91d21bc806e63b6704d 338 PANTHER PTHR30004 1 333 9.6E-144 T 22-04-2016 RPIC12D_RS02030 069e13407e4bb91d21bc806e63b6704d 338 SUPERFAMILY SSF53659 4 334 1.52E-100 T 22-04-2016 RPIC12D_RS02030 069e13407e4bb91d21bc806e63b6704d 338 PANTHER PTHR30004:SF5 1 333 9.6E-144 T 22-04-2016 RPIC12D_RS02030 069e13407e4bb91d21bc806e63b6704d 338 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 332 34.984 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RPIC12D_RS15180 90848bfc2d3c8f6f3091e2aeed5f1915 332 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 56 326 5.4E-79 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RPIC12D_RS15180 90848bfc2d3c8f6f3091e2aeed5f1915 332 PANTHER PTHR30349:SF32 8 329 3.0E-76 T 22-04-2016 RPIC12D_RS15180 90848bfc2d3c8f6f3091e2aeed5f1915 332 SUPERFAMILY SSF53850 118 293 1.87E-6 T 22-04-2016 RPIC12D_RS15180 90848bfc2d3c8f6f3091e2aeed5f1915 332 PANTHER PTHR30349 8 329 3.0E-76 T 22-04-2016 RPIC12D_RS15180 90848bfc2d3c8f6f3091e2aeed5f1915 332 PIRSF PIRSF017082 1 331 3.7E-74 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RPIC12D_RS11255 52b8b3017d2c42f113d1fbcf45a0699c 181 Gene3D G3DSA:1.10.530.10 123 177 1.8E-10 T 22-04-2016 RPIC12D_RS11255 52b8b3017d2c42f113d1fbcf45a0699c 181 Gene3D G3DSA:1.10.530.10 40 57 1.8E-10 T 22-04-2016 RPIC12D_RS11255 52b8b3017d2c42f113d1fbcf45a0699c 181 Gene3D G3DSA:3.30.20.10 86 122 1.6E-13 T 22-04-2016 RPIC12D_RS11255 52b8b3017d2c42f113d1fbcf45a0699c 181 PANTHER PTHR34408 14 180 3.9E-38 T 22-04-2016 RPIC12D_RS11255 52b8b3017d2c42f113d1fbcf45a0699c 181 SUPERFAMILY SSF53955 5 179 1.94E-48 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC12D_RS11255 52b8b3017d2c42f113d1fbcf45a0699c 181 Pfam PF00182 Chitinase class I 85 142 1.2E-10 T 22-04-2016 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 RPIC12D_RS03165 8178c78713971af06a5c78a81ab0ad1b 288 PANTHER PTHR13696 1 274 1.4E-35 T 22-04-2016 RPIC12D_RS03165 8178c78713971af06a5c78a81ab0ad1b 288 SUPERFAMILY SSF52540 1 266 7.34E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03165 8178c78713971af06a5c78a81ab0ad1b 288 Gene3D G3DSA:3.40.50.300 1 268 9.9E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03165 8178c78713971af06a5c78a81ab0ad1b 288 Pfam PF13614 AAA domain 1 158 4.3E-27 T 22-04-2016 IPR025669 AAA domain RPIC12D_RS02085 0499089e3d2575c6abf9b1778ab4e7c8 297 Gene3D G3DSA:3.10.580.10 55 193 4.4E-17 T 22-04-2016 RPIC12D_RS02085 0499089e3d2575c6abf9b1778ab4e7c8 297 SUPERFAMILY SSF54631 63 197 4.55E-29 T 22-04-2016 RPIC12D_RS02085 0499089e3d2575c6abf9b1778ab4e7c8 297 Pfam PF03471 Transporter associated domain 205 278 6.2E-19 T 22-04-2016 IPR005170 Transporter-associated domain RPIC12D_RS02085 0499089e3d2575c6abf9b1778ab4e7c8 297 SUPERFAMILY SSF56176 200 286 2.73E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC12D_RS02085 0499089e3d2575c6abf9b1778ab4e7c8 297 PANTHER PTHR22777:SF17 20 279 3.9E-99 T 22-04-2016 RPIC12D_RS02085 0499089e3d2575c6abf9b1778ab4e7c8 297 Gene3D G3DSA:3.30.465.10 194 279 1.4E-26 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC12D_RS02085 0499089e3d2575c6abf9b1778ab4e7c8 297 Pfam PF00571 CBS domain 82 123 0.0038 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS02085 0499089e3d2575c6abf9b1778ab4e7c8 297 Pfam PF00571 CBS domain 131 185 8.4E-6 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS02085 0499089e3d2575c6abf9b1778ab4e7c8 297 PANTHER PTHR22777 20 279 3.9E-99 T 22-04-2016 RPIC12D_RS02085 0499089e3d2575c6abf9b1778ab4e7c8 297 SMART SM01091 202 280 1.0E-24 T 22-04-2016 IPR005170 Transporter-associated domain RPIC12D_RS04790 f034821f76b726c9f50ea687d3454666 246 Gene3D G3DSA:3.40.50.720 7 229 4.0E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS04790 f034821f76b726c9f50ea687d3454666 246 PANTHER PTHR24322:SF485 155 185 3.9E-17 T 22-04-2016 RPIC12D_RS04790 f034821f76b726c9f50ea687d3454666 246 PANTHER PTHR24322:SF485 9 139 3.9E-17 T 22-04-2016 RPIC12D_RS04790 f034821f76b726c9f50ea687d3454666 246 SUPERFAMILY SSF51735 7 232 1.02E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS04790 f034821f76b726c9f50ea687d3454666 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 189 0.0028 T 22-04-2016 RPIC12D_RS04790 f034821f76b726c9f50ea687d3454666 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.9E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS04790 f034821f76b726c9f50ea687d3454666 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.9E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS04790 f034821f76b726c9f50ea687d3454666 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.9E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS04790 f034821f76b726c9f50ea687d3454666 246 Pfam PF00106 short chain dehydrogenase 8 196 1.9E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS04790 f034821f76b726c9f50ea687d3454666 246 PANTHER PTHR24322 155 185 3.9E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS04790 f034821f76b726c9f50ea687d3454666 246 PANTHER PTHR24322 9 139 3.9E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS05905 c348544f297effa0d89e27aa489da645 276 Gene3D G3DSA:3.20.20.370 33 258 5.9E-39 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIC12D_RS05905 c348544f297effa0d89e27aa489da645 276 Pfam PF01522 Polysaccharide deacetylase 35 183 2.5E-18 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIC12D_RS05905 c348544f297effa0d89e27aa489da645 276 SUPERFAMILY SSF88713 33 260 2.36E-36 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIC12D_RS12235 523eebc13f5f84c49fa97a412267b081 261 Pfam PF01578 Cytochrome C assembly protein 22 203 3.1E-29 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RPIC12D_RS12235 523eebc13f5f84c49fa97a412267b081 261 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 64 246 5.2E-69 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12235 523eebc13f5f84c49fa97a412267b081 261 PANTHER PTHR30071 25 243 1.2E-63 T 22-04-2016 RPIC12D_RS12235 523eebc13f5f84c49fa97a412267b081 261 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 119 139 2.6E-44 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12235 523eebc13f5f84c49fa97a412267b081 261 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 140 160 2.6E-44 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12235 523eebc13f5f84c49fa97a412267b081 261 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 81 101 2.6E-44 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12235 523eebc13f5f84c49fa97a412267b081 261 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 175 201 2.6E-44 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS12235 523eebc13f5f84c49fa97a412267b081 261 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 64 81 2.6E-44 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC12D_RS14945 404256590897aef7d7befadb48392736 344 SMART SM00880 16 281 1.2E-46 T 22-04-2016 IPR007899 CHAD domain RPIC12D_RS14945 404256590897aef7d7befadb48392736 344 Pfam PF05235 CHAD domain 24 245 3.3E-41 T 22-04-2016 IPR007899 CHAD domain RPIC12D_RS02335 d568a0919a3d12f78d267691cc6b7614 158 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 37.106 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 RPIC12D_RS02335 d568a0919a3d12f78d267691cc6b7614 158 PANTHER PTHR22960 1 158 1.3E-94 T 22-04-2016 RPIC12D_RS02335 d568a0919a3d12f78d267691cc6b7614 158 Gene3D G3DSA:3.30.70.640 3 156 2.5E-69 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RPIC12D_RS02335 d568a0919a3d12f78d267691cc6b7614 158 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 8.9E-61 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 RPIC12D_RS02335 d568a0919a3d12f78d267691cc6b7614 158 Pfam PF01967 MoaC family 15 150 9.4E-55 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RPIC12D_RS02335 d568a0919a3d12f78d267691cc6b7614 158 SUPERFAMILY SSF55040 11 155 1.1E-61 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RPIC12D_RS07005 9bbe26226f1894a03e1a9ea7879204e9 182 PANTHER PTHR11079 17 164 1.5E-48 T 22-04-2016 RPIC12D_RS07005 9bbe26226f1894a03e1a9ea7879204e9 182 Pfam PF14437 MafB19-like deaminase 21 164 1.2E-30 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 RPIC12D_RS07005 9bbe26226f1894a03e1a9ea7879204e9 182 Gene3D G3DSA:3.40.140.10 12 162 8.8E-60 T 22-04-2016 RPIC12D_RS07005 9bbe26226f1894a03e1a9ea7879204e9 182 SUPERFAMILY SSF53927 13 168 1.37E-56 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RPIC12D_RS07005 9bbe26226f1894a03e1a9ea7879204e9 182 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 68 105 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RPIC12D_RS07005 9bbe26226f1894a03e1a9ea7879204e9 182 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 23 164 45.622 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 RPIC12D_RS20070 7d32ddb72be50af0fe00b9a6c21b1319 269 Gene3D G3DSA:1.20.120.160 12 174 2.4E-28 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS20070 7d32ddb72be50af0fe00b9a6c21b1319 269 Pfam PF01627 Hpt domain 15 114 5.6E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS20070 7d32ddb72be50af0fe00b9a6c21b1319 269 SMART SM00073 13 120 1.4E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS20070 7d32ddb72be50af0fe00b9a6c21b1319 269 SUPERFAMILY SSF47226 12 147 2.36E-24 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC12D_RS15385 b63bb42a0262473c4055342ab6cbbee6 662 PANTHER PTHR32089 267 662 2.1E-138 T 22-04-2016 RPIC12D_RS15385 b63bb42a0262473c4055342ab6cbbee6 662 Pfam PF00672 HAMP domain 341 407 5.2E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS15385 b63bb42a0262473c4055342ab6cbbee6 662 SMART SM00304 360 412 4.4E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS15385 b63bb42a0262473c4055342ab6cbbee6 662 PANTHER PTHR32089:SF63 267 662 2.1E-138 T 22-04-2016 RPIC12D_RS15385 b63bb42a0262473c4055342ab6cbbee6 662 SMART SM00283 413 660 1.3E-92 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS15385 b63bb42a0262473c4055342ab6cbbee6 662 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 472 659 7.6E-62 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC12D_RS15385 b63bb42a0262473c4055342ab6cbbee6 662 SUPERFAMILY SSF58104 380 661 3.14E-73 T 22-04-2016 RPIC12D_RS15385 b63bb42a0262473c4055342ab6cbbee6 662 Gene3D G3DSA:3.30.450.20 197 329 4.9E-15 T 22-04-2016 RPIC12D_RS15385 b63bb42a0262473c4055342ab6cbbee6 662 Gene3D G3DSA:1.10.287.950 427 632 1.6E-59 T 22-04-2016 RPIC12D_RS15385 b63bb42a0262473c4055342ab6cbbee6 662 SUPERFAMILY SSF103190 122 220 5.49E-14 T 22-04-2016 IPR029151 Periplasmic sensor domain-like RPIC12D_RS15385 b63bb42a0262473c4055342ab6cbbee6 662 Pfam PF17201 Cache 3/Cache 2 fusion domain 48 336 9.2E-83 T 22-04-2016 IPR033462 Cache 3/Cache 2 fusion domain RPIC12D_RS16545 e55b297a51e6a094bf87064172571f6b 446 Gene3D G3DSA:1.10.287.130 219 288 7.7E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16545 e55b297a51e6a094bf87064172571f6b 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 291 2.7E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16545 e55b297a51e6a094bf87064172571f6b 446 PANTHER PTHR24423:SF474 168 446 3.0E-71 T 22-04-2016 RPIC12D_RS16545 e55b297a51e6a094bf87064172571f6b 446 PANTHER PTHR24423:SF474 118 134 3.0E-71 T 22-04-2016 RPIC12D_RS16545 e55b297a51e6a094bf87064172571f6b 446 SUPERFAMILY SSF47384 211 290 1.77E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16545 e55b297a51e6a094bf87064172571f6b 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 445 3.9E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16545 e55b297a51e6a094bf87064172571f6b 446 PANTHER PTHR24423 168 446 3.0E-71 T 22-04-2016 RPIC12D_RS16545 e55b297a51e6a094bf87064172571f6b 446 PANTHER PTHR24423 118 134 3.0E-71 T 22-04-2016 RPIC12D_RS16545 e55b297a51e6a094bf87064172571f6b 446 SMART SM00387 336 446 2.3E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16545 e55b297a51e6a094bf87064172571f6b 446 SUPERFAMILY SSF55874 282 445 8.25E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16545 e55b297a51e6a094bf87064172571f6b 446 SMART SM00388 227 292 6.9E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS16545 e55b297a51e6a094bf87064172571f6b 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 401 3.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16545 e55b297a51e6a094bf87064172571f6b 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 423 3.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16545 e55b297a51e6a094bf87064172571f6b 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 3.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16545 e55b297a51e6a094bf87064172571f6b 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 387 3.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS16545 e55b297a51e6a094bf87064172571f6b 446 Gene3D G3DSA:3.30.565.10 300 445 6.9E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS16810 ab16172ebb9739b6ee0b25eb8468def8 286 PANTHER PTHR10120:SF19 1 284 8.7E-104 T 22-04-2016 RPIC12D_RS16810 ab16172ebb9739b6ee0b25eb8468def8 286 PANTHER PTHR10120 1 284 8.7E-104 T 22-04-2016 RPIC12D_RS16810 ab16172ebb9739b6ee0b25eb8468def8 286 Hamap MF_00188 Protease HtpX [htpX]. 4 278 29.442 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 RPIC12D_RS16810 ab16172ebb9739b6ee0b25eb8468def8 286 Gene3D G3DSA:3.30.2010.10 56 146 1.1E-33 T 22-04-2016 RPIC12D_RS16810 ab16172ebb9739b6ee0b25eb8468def8 286 Pfam PF01435 Peptidase family M48 67 278 2.1E-36 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RPIC12D_RS00945 abd4bf3fff4dda0043e3fc2f7b31abb0 109 Gene3D G3DSA:3.40.30.10 5 106 5.8E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS00945 abd4bf3fff4dda0043e3fc2f7b31abb0 109 PANTHER PTHR11780:SF12 6 105 4.3E-29 T 22-04-2016 RPIC12D_RS00945 abd4bf3fff4dda0043e3fc2f7b31abb0 109 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 21 90 1.3E-5 T 22-04-2016 RPIC12D_RS00945 abd4bf3fff4dda0043e3fc2f7b31abb0 109 PANTHER PTHR11780 6 105 4.3E-29 T 22-04-2016 RPIC12D_RS00945 abd4bf3fff4dda0043e3fc2f7b31abb0 109 SUPERFAMILY SSF52833 5 103 5.14E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS04755 e885a881d6f31b32d1c57cf8b89dc714 66 Pfam PF12088 Protein of unknown function (DUF3565) 6 62 2.8E-30 T 22-04-2016 IPR021948 Protein of unknown function DUF3565 RPIC12D_RS05940 1ddcb2df761c3bee4186589d5933bd9f 399 Pfam PF00989 PAS fold 55 140 2.2E-5 T 22-04-2016 IPR013767 PAS fold GO:0006355 RPIC12D_RS05940 1ddcb2df761c3bee4186589d5933bd9f 399 SMART SM00387 280 399 9.7E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS05940 1ddcb2df761c3bee4186589d5933bd9f 399 SUPERFAMILY SSF47384 166 236 5.1E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS05940 1ddcb2df761c3bee4186589d5933bd9f 399 PANTHER PTHR24423:SF488 70 398 4.1E-83 T 22-04-2016 RPIC12D_RS05940 1ddcb2df761c3bee4186589d5933bd9f 399 Pfam PF00512 His Kinase A (phospho-acceptor) domain 177 236 6.0E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS05940 1ddcb2df761c3bee4186589d5933bd9f 399 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 280 398 2.9E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS05940 1ddcb2df761c3bee4186589d5933bd9f 399 Gene3D G3DSA:1.10.287.130 167 233 4.0E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS05940 1ddcb2df761c3bee4186589d5933bd9f 399 PANTHER PTHR24423 70 398 4.1E-83 T 22-04-2016 RPIC12D_RS05940 1ddcb2df761c3bee4186589d5933bd9f 399 SMART SM00091 49 117 0.0013 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS05940 1ddcb2df761c3bee4186589d5933bd9f 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 379 5.3E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS05940 1ddcb2df761c3bee4186589d5933bd9f 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 332 346 5.3E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS05940 1ddcb2df761c3bee4186589d5933bd9f 399 SMART SM00388 175 240 3.0E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS05940 1ddcb2df761c3bee4186589d5933bd9f 399 Gene3D G3DSA:3.30.565.10 243 398 2.8E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS05940 1ddcb2df761c3bee4186589d5933bd9f 399 SUPERFAMILY SSF55874 244 397 4.06E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS05940 1ddcb2df761c3bee4186589d5933bd9f 399 Gene3D G3DSA:3.30.450.20 55 140 4.9E-10 T 22-04-2016 RPIC12D_RS05940 1ddcb2df761c3bee4186589d5933bd9f 399 SUPERFAMILY SSF55785 55 115 9.77E-5 T 22-04-2016 IPR000014 PAS domain RPIC12D_RS13815 19e9d6cbdf4178d1f0b29ca268c1b686 510 PANTHER PTHR11236:SF9 5 297 1.1E-220 T 22-04-2016 RPIC12D_RS13815 19e9d6cbdf4178d1f0b29ca268c1b686 510 PANTHER PTHR11236:SF9 315 504 1.1E-220 T 22-04-2016 RPIC12D_RS13815 19e9d6cbdf4178d1f0b29ca268c1b686 510 SUPERFAMILY SSF56322 14 499 4.06E-155 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RPIC12D_RS13815 19e9d6cbdf4178d1f0b29ca268c1b686 510 PRINTS PR00095 Anthranilate synthase component I signature 433 447 6.5E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC12D_RS13815 19e9d6cbdf4178d1f0b29ca268c1b686 510 PRINTS PR00095 Anthranilate synthase component I signature 353 366 6.5E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC12D_RS13815 19e9d6cbdf4178d1f0b29ca268c1b686 510 PRINTS PR00095 Anthranilate synthase component I signature 339 352 6.5E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC12D_RS13815 19e9d6cbdf4178d1f0b29ca268c1b686 510 PRINTS PR00095 Anthranilate synthase component I signature 448 462 6.5E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC12D_RS13815 19e9d6cbdf4178d1f0b29ca268c1b686 510 PANTHER PTHR11236 5 297 1.1E-220 T 22-04-2016 RPIC12D_RS13815 19e9d6cbdf4178d1f0b29ca268c1b686 510 PANTHER PTHR11236 315 504 1.1E-220 T 22-04-2016 RPIC12D_RS13815 19e9d6cbdf4178d1f0b29ca268c1b686 510 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 25 499 1.8E-163 T 22-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC12D_RS13815 19e9d6cbdf4178d1f0b29ca268c1b686 510 Gene3D G3DSA:3.60.120.10 12 503 9.7E-176 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RPIC12D_RS13815 19e9d6cbdf4178d1f0b29ca268c1b686 510 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 172 1.6E-36 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC12D_RS13815 19e9d6cbdf4178d1f0b29ca268c1b686 510 Pfam PF00425 chorismate binding enzyme 221 491 2.5E-92 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal RPIC12D_RS04500 9052706a789ae691bf22489ad42778de 296 Gene3D G3DSA:1.10.530.10 103 248 6.9E-50 T 22-04-2016 RPIC12D_RS04500 9052706a789ae691bf22489ad42778de 296 Pfam PF01464 Transglycosylase SLT domain 118 223 5.0E-30 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RPIC12D_RS04500 9052706a789ae691bf22489ad42778de 296 SUPERFAMILY SSF53955 111 247 9.01E-46 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC12D_RS04500 9052706a789ae691bf22489ad42778de 296 PANTHER PTHR21666 98 248 1.9E-39 T 22-04-2016 RPIC12D_RS04500 9052706a789ae691bf22489ad42778de 296 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 136 164 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 RPIC12D_RS07660 85c6143422f65cb2db1cb4413bccf59d 189 SUPERFAMILY SSF46785 42 179 6.39E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS07660 85c6143422f65cb2db1cb4413bccf59d 189 Pfam PF13463 Winged helix DNA-binding domain 71 136 5.1E-20 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS07660 85c6143422f65cb2db1cb4413bccf59d 189 PIRSF PIRSF036158 2 189 3.0E-84 T 22-04-2016 IPR014601 Transcriptional regulator with MarR-type HTH domain RPIC12D_RS07660 85c6143422f65cb2db1cb4413bccf59d 189 Gene3D G3DSA:1.10.10.10 44 176 3.0E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS15175 4abb4fb4f8220292bba3d99d2d91016a 234 PANTHER PTHR26402 10 233 1.7E-95 T 22-04-2016 RPIC12D_RS15175 4abb4fb4f8220292bba3d99d2d91016a 234 Gene3D G3DSA:3.40.50.2300 10 130 3.7E-37 T 22-04-2016 RPIC12D_RS15175 4abb4fb4f8220292bba3d99d2d91016a 234 SMART SM00862 156 232 3.5E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS15175 4abb4fb4f8220292bba3d99d2d91016a 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 6.4E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS15175 4abb4fb4f8220292bba3d99d2d91016a 234 PANTHER PTHR26402:SF399 10 233 1.7E-95 T 22-04-2016 RPIC12D_RS15175 4abb4fb4f8220292bba3d99d2d91016a 234 SUPERFAMILY SSF52172 10 192 4.27E-40 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS15175 4abb4fb4f8220292bba3d99d2d91016a 234 Pfam PF00072 Response regulator receiver domain 12 120 4.6E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS15175 4abb4fb4f8220292bba3d99d2d91016a 234 SMART SM00448 10 120 3.0E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS15175 4abb4fb4f8220292bba3d99d2d91016a 234 Gene3D G3DSA:1.10.10.10 134 233 1.7E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16700 154577fcc5d48df8208ff8f36ad62641 485 PANTHER PTHR11596 405 485 1.8E-147 T 22-04-2016 RPIC12D_RS16700 154577fcc5d48df8208ff8f36ad62641 485 PANTHER PTHR11596 39 386 1.8E-147 T 22-04-2016 RPIC12D_RS16700 154577fcc5d48df8208ff8f36ad62641 485 SMART SM00098 46 484 2.9E-89 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC12D_RS16700 154577fcc5d48df8208ff8f36ad62641 485 Gene3D G3DSA:3.40.720.10 38 485 3.9E-147 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RPIC12D_RS16700 154577fcc5d48df8208ff8f36ad62641 485 SUPERFAMILY SSF53649 39 485 6.15E-128 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RPIC12D_RS16700 154577fcc5d48df8208ff8f36ad62641 485 PRINTS PR00113 Alkaline phosphatase signature 286 315 2.8E-40 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC12D_RS16700 154577fcc5d48df8208ff8f36ad62641 485 PRINTS PR00113 Alkaline phosphatase signature 45 65 2.8E-40 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC12D_RS16700 154577fcc5d48df8208ff8f36ad62641 485 PRINTS PR00113 Alkaline phosphatase signature 209 219 2.8E-40 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC12D_RS16700 154577fcc5d48df8208ff8f36ad62641 485 PRINTS PR00113 Alkaline phosphatase signature 155 175 2.8E-40 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC12D_RS16700 154577fcc5d48df8208ff8f36ad62641 485 Pfam PF00245 Alkaline phosphatase 45 484 2.3E-105 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC12D_RS06335 c71d5972241ee41336b42dffe49ba137 126 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 15 122 1.1E-33 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RPIC12D_RS06335 c71d5972241ee41336b42dffe49ba137 126 PANTHER PTHR21192 18 123 1.5E-26 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RPIC12D_RS06335 c71d5972241ee41336b42dffe49ba137 126 PANTHER PTHR21192:SF3 18 123 1.5E-26 T 22-04-2016 RPIC12D_RS06335 c71d5972241ee41336b42dffe49ba137 126 SUPERFAMILY SSF64076 13 123 7.72E-36 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RPIC12D_RS06335 c71d5972241ee41336b42dffe49ba137 126 Gene3D G3DSA:3.40.1230.10 6 124 3.0E-44 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RPIC12D_RS02735 72d58c6816c1e1aba1a97d374d6eec67 283 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 8 280 1.2E-79 T 22-04-2016 IPR017592 Pilus assembly, Flp-type CpaB RPIC12D_RS02735 72d58c6816c1e1aba1a97d374d6eec67 283 SMART SM00858 37 99 1.1E-12 T 22-04-2016 IPR013974 SAF domain RPIC12D_RS02735 72d58c6816c1e1aba1a97d374d6eec67 283 Pfam PF08666 SAF domain 39 98 1.4E-10 T 22-04-2016 IPR013974 SAF domain RPIC12D_RS02735 72d58c6816c1e1aba1a97d374d6eec67 283 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 105 218 5.6E-30 T 22-04-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain RPIC12D_RS15295 81fa92f61209933dadf4b95bcf59b1ef 362 Pfam PF03934 Type II secretion system (T2SS), protein K 43 342 1.3E-78 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 RPIC12D_RS15295 81fa92f61209933dadf4b95bcf59b1ef 362 SUPERFAMILY SSF158544 129 249 1.7E-12 T 22-04-2016 RPIC12D_RS15295 81fa92f61209933dadf4b95bcf59b1ef 362 Gene3D G3DSA:1.10.40.60 251 296 1.8E-4 T 22-04-2016 RPIC12D_RS15295 81fa92f61209933dadf4b95bcf59b1ef 362 SUPERFAMILY SSF54523 315 342 2.98E-5 T 22-04-2016 RPIC12D_RS15295 81fa92f61209933dadf4b95bcf59b1ef 362 SUPERFAMILY SSF54523 51 128 2.98E-5 T 22-04-2016 RPIC12D_RS15295 81fa92f61209933dadf4b95bcf59b1ef 362 PIRSF PIRSF002786 13 361 1.1E-72 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 RPIC12D_RS15295 81fa92f61209933dadf4b95bcf59b1ef 362 Gene3D G3DSA:1.10.40.60 127 250 2.9E-11 T 22-04-2016 RPIC12D_RS04835 faade5ddb9ffe147727344be6205ce95 426 SUPERFAMILY SSF63867 347 425 5.89E-25 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS04835 faade5ddb9ffe147727344be6205ce95 426 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 192 331 2.7E-31 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS04835 faade5ddb9ffe147727344be6205ce95 426 Gene3D G3DSA:2.40.340.10 350 420 1.3E-31 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS04835 faade5ddb9ffe147727344be6205ce95 426 PANTHER PTHR10192 19 425 8.4E-165 T 22-04-2016 RPIC12D_RS04835 faade5ddb9ffe147727344be6205ce95 426 Pfam PF03453 MoeA N-terminal region (domain I and II) 20 183 4.7E-35 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS04835 faade5ddb9ffe147727344be6205ce95 426 Pfam PF00994 Probable molybdopterin binding domain 198 335 2.3E-30 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS04835 faade5ddb9ffe147727344be6205ce95 426 Gene3D G3DSA:3.90.105.10 158 178 1.6E-21 T 22-04-2016 RPIC12D_RS04835 faade5ddb9ffe147727344be6205ce95 426 Gene3D G3DSA:3.90.105.10 40 61 1.6E-21 T 22-04-2016 RPIC12D_RS04835 faade5ddb9ffe147727344be6205ce95 426 SUPERFAMILY SSF63882 18 191 4.32E-52 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS04835 faade5ddb9ffe147727344be6205ce95 426 Pfam PF03454 MoeA C-terminal region (domain IV) 351 422 2.0E-20 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC12D_RS04835 faade5ddb9ffe147727344be6205ce95 426 SMART SM00852 196 337 8.6E-44 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS04835 faade5ddb9ffe147727344be6205ce95 426 Gene3D G3DSA:2.170.190.11 62 157 3.8E-26 T 22-04-2016 RPIC12D_RS04835 faade5ddb9ffe147727344be6205ce95 426 SUPERFAMILY SSF53218 193 342 6.15E-44 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS04835 faade5ddb9ffe147727344be6205ce95 426 PANTHER PTHR10192:SF11 19 425 8.4E-165 T 22-04-2016 RPIC12D_RS04835 faade5ddb9ffe147727344be6205ce95 426 Gene3D G3DSA:3.40.980.10 179 349 3.3E-63 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC12D_RS03640 0df49b9989c2d505ab02f04e27efdca9 173 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 70 173 3.8E-43 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 RPIC12D_RS03640 0df49b9989c2d505ab02f04e27efdca9 173 PRINTS PR01021 OMPA domain signature 103 118 2.2E-16 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RPIC12D_RS03640 0df49b9989c2d505ab02f04e27efdca9 173 PRINTS PR01021 OMPA domain signature 118 134 2.2E-16 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RPIC12D_RS03640 0df49b9989c2d505ab02f04e27efdca9 173 PRINTS PR01021 OMPA domain signature 73 95 2.2E-16 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RPIC12D_RS03640 0df49b9989c2d505ab02f04e27efdca9 173 SUPERFAMILY SSF103088 68 173 1.31E-33 T 22-04-2016 IPR006665 OmpA-like domain RPIC12D_RS03640 0df49b9989c2d505ab02f04e27efdca9 173 PANTHER PTHR30128 69 173 1.5E-46 T 22-04-2016 RPIC12D_RS03640 0df49b9989c2d505ab02f04e27efdca9 173 ProSitePatterns PS01068 OmpA-like domain. 105 149 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 RPIC12D_RS03640 0df49b9989c2d505ab02f04e27efdca9 173 Gene3D G3DSA:3.30.1330.60 64 172 1.1E-33 T 22-04-2016 IPR006665 OmpA-like domain RPIC12D_RS03640 0df49b9989c2d505ab02f04e27efdca9 173 PANTHER PTHR30128:SF18 69 173 1.5E-46 T 22-04-2016 RPIC12D_RS03640 0df49b9989c2d505ab02f04e27efdca9 173 Pfam PF00691 OmpA family 72 167 4.7E-21 T 22-04-2016 IPR006665 OmpA-like domain RPIC12D_RS15260 94eadffa001ac4e4de4e57b23796ab80 368 Gene3D G3DSA:3.10.180.10 5 161 2.0E-47 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS15260 94eadffa001ac4e4de4e57b23796ab80 368 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 153 3.0E-65 T 22-04-2016 RPIC12D_RS15260 94eadffa001ac4e4de4e57b23796ab80 368 PANTHER PTHR11959:SF1 1 368 1.2E-119 T 22-04-2016 RPIC12D_RS15260 94eadffa001ac4e4de4e57b23796ab80 368 PANTHER PTHR11959 1 368 1.2E-119 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 RPIC12D_RS15260 94eadffa001ac4e4de4e57b23796ab80 368 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 14 361 3.3E-116 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 RPIC12D_RS15260 94eadffa001ac4e4de4e57b23796ab80 368 SUPERFAMILY SSF54593 1 348 3.05E-84 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS15260 94eadffa001ac4e4de4e57b23796ab80 368 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 171 282 4.0E-13 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC12D_RS15260 94eadffa001ac4e4de4e57b23796ab80 368 Gene3D G3DSA:3.10.180.10 167 363 4.9E-69 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS15260 94eadffa001ac4e4de4e57b23796ab80 368 PIRSF PIRSF009283 1 362 2.0E-117 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 RPIC12D_RS16225 621909c74c4113e19357b85c60eb35f8 684 Pfam PF02872 5'-nucleotidase, C-terminal domain 406 592 2.9E-23 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RPIC12D_RS16225 621909c74c4113e19357b85c60eb35f8 684 Gene3D G3DSA:3.60.21.10 38 403 1.2E-77 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS16225 621909c74c4113e19357b85c60eb35f8 684 Pfam PF00149 Calcineurin-like phosphoesterase 49 306 3.3E-4 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RPIC12D_RS16225 621909c74c4113e19357b85c60eb35f8 684 Gene3D G3DSA:3.90.780.10 405 626 4.5E-40 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RPIC12D_RS16225 621909c74c4113e19357b85c60eb35f8 684 SUPERFAMILY SSF56300 45 402 4.05E-72 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS16225 621909c74c4113e19357b85c60eb35f8 684 PANTHER PTHR11575 46 683 4.8E-159 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC12D_RS16225 621909c74c4113e19357b85c60eb35f8 684 PANTHER PTHR11575:SF6 46 683 4.8E-159 T 22-04-2016 RPIC12D_RS16225 621909c74c4113e19357b85c60eb35f8 684 PRINTS PR01607 Apyrase family signature 477 500 4.6E-25 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC12D_RS16225 621909c74c4113e19357b85c60eb35f8 684 PRINTS PR01607 Apyrase family signature 333 353 4.6E-25 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC12D_RS16225 621909c74c4113e19357b85c60eb35f8 684 PRINTS PR01607 Apyrase family signature 567 586 4.6E-25 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC12D_RS16225 621909c74c4113e19357b85c60eb35f8 684 PRINTS PR01607 Apyrase family signature 289 312 4.6E-25 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC12D_RS16225 621909c74c4113e19357b85c60eb35f8 684 PRINTS PR01607 Apyrase family signature 45 63 4.6E-25 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC12D_RS16225 621909c74c4113e19357b85c60eb35f8 684 PRINTS PR01607 Apyrase family signature 261 278 4.6E-25 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC12D_RS16225 621909c74c4113e19357b85c60eb35f8 684 ProSitePatterns PS00786 5'-nucleotidase signature 2. 133 144 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 RPIC12D_RS16225 621909c74c4113e19357b85c60eb35f8 684 SUPERFAMILY SSF55816 403 626 1.96E-38 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RPIC12D_RS08780 a0088c572cedca5058fdf6c96aa91a6a 300 PANTHER PTHR30293:SF1 1 293 6.6E-85 T 22-04-2016 RPIC12D_RS08780 a0088c572cedca5058fdf6c96aa91a6a 300 Gene3D G3DSA:1.10.10.10 1 81 5.0E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08780 a0088c572cedca5058fdf6c96aa91a6a 300 SUPERFAMILY SSF53850 89 295 2.06E-34 T 22-04-2016 RPIC12D_RS08780 a0088c572cedca5058fdf6c96aa91a6a 300 Gene3D G3DSA:3.40.190.10 194 266 6.1E-12 T 22-04-2016 RPIC12D_RS08780 a0088c572cedca5058fdf6c96aa91a6a 300 Pfam PF03466 LysR substrate binding domain 88 292 3.9E-35 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS08780 a0088c572cedca5058fdf6c96aa91a6a 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.3E-23 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS08780 a0088c572cedca5058fdf6c96aa91a6a 300 PANTHER PTHR30293 1 293 6.6E-85 T 22-04-2016 RPIC12D_RS08780 a0088c572cedca5058fdf6c96aa91a6a 300 SUPERFAMILY SSF46785 1 86 1.09E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08780 a0088c572cedca5058fdf6c96aa91a6a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS08780 a0088c572cedca5058fdf6c96aa91a6a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS08780 a0088c572cedca5058fdf6c96aa91a6a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS08780 a0088c572cedca5058fdf6c96aa91a6a 300 Gene3D G3DSA:3.40.190.10 82 193 4.9E-21 T 22-04-2016 RPIC12D_RS03260 be936f38716575b4ec98df4c9f9f88b0 109 PANTHER PTHR33154:SF5 1 101 5.7E-20 T 22-04-2016 RPIC12D_RS03260 be936f38716575b4ec98df4c9f9f88b0 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 3.4E-6 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC12D_RS03260 be936f38716575b4ec98df4c9f9f88b0 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 3.4E-6 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC12D_RS03260 be936f38716575b4ec98df4c9f9f88b0 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 3.4E-6 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC12D_RS03260 be936f38716575b4ec98df4c9f9f88b0 109 Pfam PF12840 Helix-turn-helix domain 10 69 6.5E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS03260 be936f38716575b4ec98df4c9f9f88b0 109 PANTHER PTHR33154 1 101 5.7E-20 T 22-04-2016 RPIC12D_RS03260 be936f38716575b4ec98df4c9f9f88b0 109 SUPERFAMILY SSF46785 3 93 1.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS03260 be936f38716575b4ec98df4c9f9f88b0 109 Gene3D G3DSA:1.10.10.10 2 95 3.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS03260 be936f38716575b4ec98df4c9f9f88b0 109 SMART SM00418 9 89 7.3E-7 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC12D_RS12130 22d18b3ae00b5f4e77be521e613de980 105 PANTHER PTHR36540 4 105 1.5E-33 T 22-04-2016 RPIC12D_RS12130 22d18b3ae00b5f4e77be521e613de980 105 Pfam PF06865 Protein of unknown function (DUF1255) 14 104 4.8E-39 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 RPIC12D_RS12130 22d18b3ae00b5f4e77be521e613de980 105 SUPERFAMILY SSF51182 13 104 3.85E-36 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS12130 22d18b3ae00b5f4e77be521e613de980 105 PANTHER PTHR36540:SF1 4 105 1.5E-33 T 22-04-2016 RPIC12D_RS12130 22d18b3ae00b5f4e77be521e613de980 105 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 12 105 27.57 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 RPIC12D_RS12130 22d18b3ae00b5f4e77be521e613de980 105 Gene3D G3DSA:2.60.120.10 12 104 7.4E-41 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS14395 6c2fb2c00ad7b036f1019c8243b3b73b 247 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 240 36.84 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 RPIC12D_RS14395 6c2fb2c00ad7b036f1019c8243b3b73b 247 SUPERFAMILY SSF51366 1 239 9.42E-77 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RPIC12D_RS14395 6c2fb2c00ad7b036f1019c8243b3b73b 247 PANTHER PTHR21235 1 245 4.7E-100 T 22-04-2016 RPIC12D_RS14395 6c2fb2c00ad7b036f1019c8243b3b73b 247 Pfam PF00977 Histidine biosynthesis protein 3 232 2.7E-81 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 RPIC12D_RS14395 6c2fb2c00ad7b036f1019c8243b3b73b 247 PANTHER PTHR21235:SF15 1 245 4.7E-100 T 22-04-2016 RPIC12D_RS14395 6c2fb2c00ad7b036f1019c8243b3b73b 247 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 237 4.7E-79 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 RPIC12D_RS14395 6c2fb2c00ad7b036f1019c8243b3b73b 247 Gene3D G3DSA:3.20.20.70 1 240 8.6E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS15955 0d03c0c786feddcd46c00380f27d5cb0 153 Pfam PF13380 CoA binding domain 21 144 1.6E-39 T 22-04-2016 IPR003781 CoA-binding GO:0048037 RPIC12D_RS15955 0d03c0c786feddcd46c00380f27d5cb0 153 SMART SM00881 17 118 6.1E-23 T 22-04-2016 IPR003781 CoA-binding GO:0048037 RPIC12D_RS15955 0d03c0c786feddcd46c00380f27d5cb0 153 PANTHER PTHR33303 9 149 1.2E-42 T 22-04-2016 RPIC12D_RS15955 0d03c0c786feddcd46c00380f27d5cb0 153 SUPERFAMILY SSF51735 13 148 2.46E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS15955 0d03c0c786feddcd46c00380f27d5cb0 153 Gene3D G3DSA:3.40.50.720 11 148 1.3E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS13665 6d92a49bbbe6de1a1899e899dc4c2b2e 319 SUPERFAMILY SSF81799 116 219 4.45E-32 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS13665 6d92a49bbbe6de1a1899e899dc4c2b2e 319 PANTHER PTHR11265:SF0 9 319 6.2E-130 T 22-04-2016 RPIC12D_RS13665 6d92a49bbbe6de1a1899e899dc4c2b2e 319 Gene3D G3DSA:3.40.50.150 11 113 1.4E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS13665 6d92a49bbbe6de1a1899e899dc4c2b2e 319 Gene3D G3DSA:3.40.50.150 223 318 1.4E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS13665 6d92a49bbbe6de1a1899e899dc4c2b2e 319 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 11 319 37.046 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS13665 6d92a49bbbe6de1a1899e899dc4c2b2e 319 PANTHER PTHR11265 9 319 6.2E-130 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS13665 6d92a49bbbe6de1a1899e899dc4c2b2e 319 Pfam PF01795 MraW methylase family 9 318 6.2E-99 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS13665 6d92a49bbbe6de1a1899e899dc4c2b2e 319 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 10 318 8.0E-104 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS13665 6d92a49bbbe6de1a1899e899dc4c2b2e 319 SUPERFAMILY SSF53335 11 116 7.58E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS13665 6d92a49bbbe6de1a1899e899dc4c2b2e 319 SUPERFAMILY SSF53335 220 318 7.58E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS13665 6d92a49bbbe6de1a1899e899dc4c2b2e 319 PIRSF PIRSF004486 5 319 2.6E-95 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS13665 6d92a49bbbe6de1a1899e899dc4c2b2e 319 Gene3D G3DSA:1.10.150.170 116 222 1.1E-37 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC12D_RS05280 52964c080550d5d45a82b08f3d9aa354 109 SUPERFAMILY SSF54862 3 107 6.52E-23 T 22-04-2016 RPIC12D_RS05280 52964c080550d5d45a82b08f3d9aa354 109 Pfam PF11953 Domain of unknown function (DUF3470) 66 108 8.5E-20 T 22-04-2016 IPR022569 Ferredoxin, C-terminal RPIC12D_RS05280 52964c080550d5d45a82b08f3d9aa354 109 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.1E-14 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RPIC12D_RS05280 52964c080550d5d45a82b08f3d9aa354 109 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.1E-14 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RPIC12D_RS05280 52964c080550d5d45a82b08f3d9aa354 109 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.1E-14 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RPIC12D_RS05280 52964c080550d5d45a82b08f3d9aa354 109 PANTHER PTHR11938:SF101 1 83 2.2E-36 T 22-04-2016 RPIC12D_RS05280 52964c080550d5d45a82b08f3d9aa354 109 PANTHER PTHR11938 1 83 2.2E-36 T 22-04-2016 RPIC12D_RS05280 52964c080550d5d45a82b08f3d9aa354 109 Pfam PF00037 4Fe-4S binding domain 34 56 1.7E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC12D_RS05280 52964c080550d5d45a82b08f3d9aa354 109 Pfam PF12800 4Fe-4S binding domain 7 23 0.24 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC12D_RS05280 52964c080550d5d45a82b08f3d9aa354 109 Gene3D G3DSA:3.30.70.20 4 104 6.4E-21 T 22-04-2016 RPIC12D_RS05280 52964c080550d5d45a82b08f3d9aa354 109 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC12D_RS04900 47850a6dfe2342f89efba15bc0f8040b 326 PANTHER PTHR18919 33 326 1.1E-133 T 22-04-2016 RPIC12D_RS04900 47850a6dfe2342f89efba15bc0f8040b 326 Gene3D G3DSA:3.40.47.10 4 168 2.8E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS04900 47850a6dfe2342f89efba15bc0f8040b 326 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 237 325 4.5E-35 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RPIC12D_RS04900 47850a6dfe2342f89efba15bc0f8040b 326 Gene3D G3DSA:3.40.47.10 169 325 1.9E-53 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS04900 47850a6dfe2342f89efba15bc0f8040b 326 PANTHER PTHR18919:SF109 33 326 1.1E-133 T 22-04-2016 RPIC12D_RS04900 47850a6dfe2342f89efba15bc0f8040b 326 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 114 191 2.1E-35 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RPIC12D_RS04900 47850a6dfe2342f89efba15bc0f8040b 326 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 326 1.7E-127 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RPIC12D_RS04900 47850a6dfe2342f89efba15bc0f8040b 326 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 326 71.377 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RPIC12D_RS04900 47850a6dfe2342f89efba15bc0f8040b 326 SUPERFAMILY SSF53901 3 326 1.08E-72 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS24600 df1d40c3d41f5da74751909eb0ad0156 123 Pfam PF08886 Glutamate-cysteine ligase 1 123 1.1E-58 T 22-04-2016 IPR011718 Glutamate--cysteine ligase GshA RPIC12D_RS00240 38580ae5678fb831ee177ff2006ae623 309 ProSitePatterns PS01053 Arginase family signature. 225 246 - T 22-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 RPIC12D_RS00240 38580ae5678fb831ee177ff2006ae623 309 PANTHER PTHR11358:SF2 4 296 1.3E-71 T 22-04-2016 RPIC12D_RS00240 38580ae5678fb831ee177ff2006ae623 309 SUPERFAMILY SSF52768 5 303 1.13E-70 T 22-04-2016 RPIC12D_RS00240 38580ae5678fb831ee177ff2006ae623 309 Pfam PF00491 Arginase family 6 294 1.8E-60 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS00240 38580ae5678fb831ee177ff2006ae623 309 PANTHER PTHR11358 4 296 1.3E-71 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS00240 38580ae5678fb831ee177ff2006ae623 309 Gene3D G3DSA:3.40.800.10 6 302 2.0E-72 T 22-04-2016 IPR023696 Ureohydrolase domain RPIC12D_RS00240 38580ae5678fb831ee177ff2006ae623 309 PRINTS PR00116 Arginase signature 222 251 1.25E-30 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS00240 38580ae5678fb831ee177ff2006ae623 309 PRINTS PR00116 Arginase signature 93 108 1.25E-30 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS00240 38580ae5678fb831ee177ff2006ae623 309 PRINTS PR00116 Arginase signature 173 191 1.25E-30 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS00240 38580ae5678fb831ee177ff2006ae623 309 PRINTS PR00116 Arginase signature 119 146 1.25E-30 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC12D_RS09505 bc863332d9a2ca3a3000d3942e4d27b4 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 5.3E-188 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 RPIC12D_RS09505 bc863332d9a2ca3a3000d3942e4d27b4 417 SUPERFAMILY SSF56762 16 417 1.57E-137 T 22-04-2016 IPR029014 NiFe hydrogenase-like RPIC12D_RS09505 bc863332d9a2ca3a3000d3942e4d27b4 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 50.065 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 RPIC12D_RS09505 bc863332d9a2ca3a3000d3942e4d27b4 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 RPIC12D_RS09505 bc863332d9a2ca3a3000d3942e4d27b4 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 3.5E-123 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 RPIC12D_RS09505 bc863332d9a2ca3a3000d3942e4d27b4 417 PANTHER PTHR11993 3 164 2.7E-238 T 22-04-2016 RPIC12D_RS09505 bc863332d9a2ca3a3000d3942e4d27b4 417 PANTHER PTHR11993 190 412 2.7E-238 T 22-04-2016 RPIC12D_RS09505 bc863332d9a2ca3a3000d3942e4d27b4 417 Gene3D G3DSA:1.10.645.10 6 404 4.8E-62 T 22-04-2016 IPR029014 NiFe hydrogenase-like RPIC12D_RS09505 bc863332d9a2ca3a3000d3942e4d27b4 417 PANTHER PTHR11993:SF10 3 164 2.7E-238 T 22-04-2016 RPIC12D_RS09505 bc863332d9a2ca3a3000d3942e4d27b4 417 PANTHER PTHR11993:SF10 190 412 2.7E-238 T 22-04-2016 RPIC12D_RS10540 e118cfc0d683c21fdc2d53edf615ac21 314 Pfam PF00561 alpha/beta hydrolase fold 37 293 1.2E-24 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS10540 e118cfc0d683c21fdc2d53edf615ac21 314 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 36 44 1.2E-9 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 RPIC12D_RS10540 e118cfc0d683c21fdc2d53edf615ac21 314 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 105 119 1.2E-9 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 RPIC12D_RS10540 e118cfc0d683c21fdc2d53edf615ac21 314 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 62 73 1.2E-9 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 RPIC12D_RS10540 e118cfc0d683c21fdc2d53edf615ac21 314 SUPERFAMILY SSF53474 9 305 7.57E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS10540 e118cfc0d683c21fdc2d53edf615ac21 314 PANTHER PTHR10992:SF757 19 167 3.4E-39 T 22-04-2016 RPIC12D_RS10540 e118cfc0d683c21fdc2d53edf615ac21 314 PANTHER PTHR10992:SF757 207 311 3.4E-39 T 22-04-2016 RPIC12D_RS10540 e118cfc0d683c21fdc2d53edf615ac21 314 PANTHER PTHR10992 19 167 3.4E-39 T 22-04-2016 RPIC12D_RS10540 e118cfc0d683c21fdc2d53edf615ac21 314 PANTHER PTHR10992 207 311 3.4E-39 T 22-04-2016 RPIC12D_RS10540 e118cfc0d683c21fdc2d53edf615ac21 314 Gene3D G3DSA:3.40.50.1820 16 306 1.5E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS10540 e118cfc0d683c21fdc2d53edf615ac21 314 PRINTS PR00111 Alpha/beta hydrolase fold signature 59 74 8.0E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS10540 e118cfc0d683c21fdc2d53edf615ac21 314 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 8.0E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS10540 e118cfc0d683c21fdc2d53edf615ac21 314 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 8.0E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS07225 1f32e1f33ba154bf7433be8560919b4e 331 SUPERFAMILY SSF51569 14 307 2.49E-75 T 22-04-2016 RPIC12D_RS07225 1f32e1f33ba154bf7433be8560919b4e 331 Pfam PF00682 HMGL-like 17 289 5.4E-49 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RPIC12D_RS07225 1f32e1f33ba154bf7433be8560919b4e 331 PANTHER PTHR10277 1 308 2.5E-116 T 22-04-2016 RPIC12D_RS07225 1f32e1f33ba154bf7433be8560919b4e 331 Gene3D G3DSA:3.20.20.70 15 297 7.1E-73 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS07225 1f32e1f33ba154bf7433be8560919b4e 331 PANTHER PTHR10277:SF1 1 308 2.5E-116 T 22-04-2016 RPIC12D_RS04340 7236c94c6292a9519898291bb6572c58 374 Pfam PF04055 Radical SAM superfamily 77 254 9.1E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC12D_RS04340 7236c94c6292a9519898291bb6572c58 374 Gene3D G3DSA:3.20.20.70 79 262 2.9E-9 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS04340 7236c94c6292a9519898291bb6572c58 374 SMART SM00729 72 300 5.5E-5 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC12D_RS04340 7236c94c6292a9519898291bb6572c58 374 PANTHER PTHR11228:SF26 19 321 4.6E-91 T 22-04-2016 RPIC12D_RS04340 7236c94c6292a9519898291bb6572c58 374 SUPERFAMILY SSF102114 56 273 1.57E-15 T 22-04-2016 RPIC12D_RS04340 7236c94c6292a9519898291bb6572c58 374 PANTHER PTHR11228 19 321 4.6E-91 T 22-04-2016 RPIC12D_RS08000 4fd6d9613b7357fd32c97a9e05cd4347 725 PANTHER PTHR11472 50 699 2.3E-178 T 22-04-2016 RPIC12D_RS08000 4fd6d9613b7357fd32c97a9e05cd4347 725 SMART SM00491 551 681 1.6E-41 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RPIC12D_RS08000 4fd6d9613b7357fd32c97a9e05cd4347 725 SUPERFAMILY SSF52540 350 364 1.36E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08000 4fd6d9613b7357fd32c97a9e05cd4347 725 SUPERFAMILY SSF52540 233 276 1.36E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08000 4fd6d9613b7357fd32c97a9e05cd4347 725 SUPERFAMILY SSF52540 525 620 1.36E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08000 4fd6d9613b7357fd32c97a9e05cd4347 725 SUPERFAMILY SSF52540 651 668 1.36E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08000 4fd6d9613b7357fd32c97a9e05cd4347 725 Gene3D G3DSA:3.40.50.300 232 288 1.3E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08000 4fd6d9613b7357fd32c97a9e05cd4347 725 Gene3D G3DSA:3.40.50.300 76 157 1.3E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08000 4fd6d9613b7357fd32c97a9e05cd4347 725 Pfam PF13307 Helicase C-terminal domain 532 694 1.3E-32 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RPIC12D_RS08000 4fd6d9613b7357fd32c97a9e05cd4347 725 Pfam PF04851 Type III restriction enzyme, res subunit 67 297 8.1E-5 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RPIC12D_RS08000 4fd6d9613b7357fd32c97a9e05cd4347 725 PANTHER PTHR11472:SF37 50 699 2.3E-178 T 22-04-2016 RPIC12D_RS08000 4fd6d9613b7357fd32c97a9e05cd4347 725 SUPERFAMILY SSF52540 233 290 4.41E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08000 4fd6d9613b7357fd32c97a9e05cd4347 725 SUPERFAMILY SSF52540 61 156 4.41E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08000 4fd6d9613b7357fd32c97a9e05cd4347 725 SUPERFAMILY SSF52540 640 678 4.41E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08000 4fd6d9613b7357fd32c97a9e05cd4347 725 Gene3D G3DSA:3.40.50.300 525 678 7.9E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12650 e8629eadbd397655cc4631ad7a42f636 215 Pfam PF08721 TnsA endonuclease C terminal 126 201 1.4E-14 T 22-04-2016 IPR014832 TnsA endonuclease C-terminal RPIC12D_RS12650 e8629eadbd397655cc4631ad7a42f636 215 Pfam PF08722 TnsA endonuclease N terminal 62 124 1.4E-11 T 22-04-2016 IPR014833 TnsA endonuclease, N-terminal RPIC12D_RS08890 ed6815d0b88cfe45605c7491fd58e25b 630 PANTHER PTHR10824 8 454 2.5E-64 T 22-04-2016 RPIC12D_RS08890 ed6815d0b88cfe45605c7491fd58e25b 630 Gene3D G3DSA:3.40.50.1820 329 431 1.5E-26 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS08890 ed6815d0b88cfe45605c7491fd58e25b 630 Gene3D G3DSA:3.40.50.1820 125 263 1.5E-26 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS08890 ed6815d0b88cfe45605c7491fd58e25b 630 SUPERFAMILY SSF69118 472 612 1.24E-17 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS08890 ed6815d0b88cfe45605c7491fd58e25b 630 TIGRFAM TIGR04029 CMD_Avi_7170: CMD domain protein, Avi_7170 family 457 613 2.9E-29 T 22-04-2016 IPR023982 Conserved hypothetical protein CHP04029, CMD-like RPIC12D_RS08890 ed6815d0b88cfe45605c7491fd58e25b 630 Gene3D G3DSA:1.20.1290.10 499 612 2.8E-14 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS08890 ed6815d0b88cfe45605c7491fd58e25b 630 PANTHER PTHR10824:SF4 8 454 2.5E-64 T 22-04-2016 RPIC12D_RS08890 ed6815d0b88cfe45605c7491fd58e25b 630 Pfam PF04775 Acyl-CoA thioester hydrolase/BAAT N-terminal region 16 135 9.3E-34 T 22-04-2016 IPR006862 Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase RPIC12D_RS08890 ed6815d0b88cfe45605c7491fd58e25b 630 SUPERFAMILY SSF53474 294 391 3.08E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS08890 ed6815d0b88cfe45605c7491fd58e25b 630 SUPERFAMILY SSF53474 64 261 3.08E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS08890 ed6815d0b88cfe45605c7491fd58e25b 630 SUPERFAMILY SSF53474 420 431 3.08E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS08890 ed6815d0b88cfe45605c7491fd58e25b 630 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 206 435 9.0E-59 T 22-04-2016 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal RPIC12D_RS00720 10a7ca2d7dec048c674377040b8e1d3c 107 Pfam PF08895 Domain of unknown function (DUF1840) 1 105 3.0E-27 T 22-04-2016 IPR014991 Protein of unknown function DUF1840 RPIC12D_RS01325 e65d296bc233daac1774131f5bea05b7 120 Pfam PF05488 PAAR motif 16 86 1.9E-6 T 22-04-2016 IPR008727 PAAR motif RPIC12D_RS09605 2a722d7616cf6f000f49ddb682ebccac 146 Pfam PF12279 Protein of unknown function (DUF3619) 8 143 8.2E-46 T 22-04-2016 IPR022064 Protein of unknown function DUF3619 RPIC12D_RS16450 3a083925c592c59a6f0aa9034dad21c7 226 SUPERFAMILY SSF52172 1 165 7.12E-38 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS16450 3a083925c592c59a6f0aa9034dad21c7 226 SMART SM00862 145 218 2.1E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS16450 3a083925c592c59a6f0aa9034dad21c7 226 SMART SM00448 1 112 2.9E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS16450 3a083925c592c59a6f0aa9034dad21c7 226 PANTHER PTHR26402:SF518 1 223 9.5E-74 T 22-04-2016 RPIC12D_RS16450 3a083925c592c59a6f0aa9034dad21c7 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 2.9E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS16450 3a083925c592c59a6f0aa9034dad21c7 226 PANTHER PTHR26402 1 223 9.5E-74 T 22-04-2016 RPIC12D_RS16450 3a083925c592c59a6f0aa9034dad21c7 226 Gene3D G3DSA:1.10.10.10 123 220 3.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16450 3a083925c592c59a6f0aa9034dad21c7 226 Pfam PF00072 Response regulator receiver domain 4 113 9.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS16450 3a083925c592c59a6f0aa9034dad21c7 226 Gene3D G3DSA:3.40.50.2300 1 122 9.6E-37 T 22-04-2016 RPIC12D_RS17825 3c270636a32fd8f67b6ea5fc2e71b5c6 104 Pfam PF01642 Methylmalonyl-CoA mutase 2 104 6.0E-36 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 RPIC12D_RS17825 3c270636a32fd8f67b6ea5fc2e71b5c6 104 PANTHER PTHR23408 1 104 5.8E-41 T 22-04-2016 RPIC12D_RS17825 3c270636a32fd8f67b6ea5fc2e71b5c6 104 Gene3D G3DSA:3.20.20.240 2 104 4.3E-44 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 RPIC12D_RS17825 3c270636a32fd8f67b6ea5fc2e71b5c6 104 SUPERFAMILY SSF51703 2 104 2.35E-36 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 RPIC12D_RS17825 3c270636a32fd8f67b6ea5fc2e71b5c6 104 PANTHER PTHR23408:SF1 1 104 5.8E-41 T 22-04-2016 RPIC12D_RS07120 0a02c1ded809560442c81536fcf0b55c 159 PANTHER PTHR37952:SF2 9 156 2.9E-58 T 22-04-2016 RPIC12D_RS07120 0a02c1ded809560442c81536fcf0b55c 159 PIRSF PIRSF003174 2 159 3.5E-63 T 22-04-2016 IPR010292 Uncharacterised protein family CreA RPIC12D_RS07120 0a02c1ded809560442c81536fcf0b55c 159 Pfam PF05981 CreA protein 27 151 2.7E-52 T 22-04-2016 IPR010292 Uncharacterised protein family CreA RPIC12D_RS07120 0a02c1ded809560442c81536fcf0b55c 159 PANTHER PTHR37952 9 156 2.9E-58 T 22-04-2016 RPIC12D_RS01535 23fefdc9bbf6da31389f5dc9c7198661 263 Gene3D G3DSA:3.90.420.10 105 261 1.3E-53 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RPIC12D_RS01535 23fefdc9bbf6da31389f5dc9c7198661 263 SUPERFAMILY SSF56524 58 262 2.75E-64 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RPIC12D_RS01535 23fefdc9bbf6da31389f5dc9c7198661 263 PANTHER PTHR19372 12 261 2.4E-94 T 22-04-2016 RPIC12D_RS01535 23fefdc9bbf6da31389f5dc9c7198661 263 PANTHER PTHR19372:SF9 12 261 2.4E-94 T 22-04-2016 RPIC12D_RS01535 23fefdc9bbf6da31389f5dc9c7198661 263 Pfam PF00174 Oxidoreductase molybdopterin binding domain 109 252 2.0E-32 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RPIC12D_RS09470 a4451dd314c44fa2e4530eeebfe1e600 103 PANTHER PTHR11434 5 103 7.5E-40 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RPIC12D_RS09470 a4451dd314c44fa2e4530eeebfe1e600 103 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 9 98 9.6E-24 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RPIC12D_RS09470 a4451dd314c44fa2e4530eeebfe1e600 103 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 103 20.712 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RPIC12D_RS16865 4844998c5b8635159818df837188d1e4 383 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 22 378 8.0E-126 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 RPIC12D_RS16865 4844998c5b8635159818df837188d1e4 383 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 336 360 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 RPIC12D_RS16865 4844998c5b8635159818df837188d1e4 383 Pfam PF01098 Cell cycle protein 25 379 2.3E-97 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RPIC12D_RS16865 4844998c5b8635159818df837188d1e4 383 PANTHER PTHR30474:SF1 1 382 1.3E-139 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 RPIC12D_RS16865 4844998c5b8635159818df837188d1e4 383 PANTHER PTHR30474 1 382 1.3E-139 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RPIC12D_RS03400 8b14cd13495d514b7dc3cf9cc2e8a739 144 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 12 140 1.7E-53 T 22-04-2016 IPR022262 Lipoprotein, putative RPIC12D_RS00475 f728f05da8cba55365f96614a613e564 284 PANTHER PTHR23309 1 284 6.0E-141 T 22-04-2016 RPIC12D_RS00475 f728f05da8cba55365f96614a613e564 284 SUPERFAMILY SSF48179 185 283 4.76E-33 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC12D_RS00475 f728f05da8cba55365f96614a613e564 284 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 207 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC12D_RS00475 f728f05da8cba55365f96614a613e564 284 Gene3D G3DSA:3.40.50.720 3 187 1.0E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS00475 f728f05da8cba55365f96614a613e564 284 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 183 2.5E-65 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC12D_RS00475 f728f05da8cba55365f96614a613e564 284 SUPERFAMILY SSF51735 3 185 5.71E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS00475 f728f05da8cba55365f96614a613e564 284 PIRSF PIRSF000105 1 284 2.6E-86 T 22-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 RPIC12D_RS00475 f728f05da8cba55365f96614a613e564 284 Gene3D G3DSA:1.10.1040.10 188 283 1.1E-35 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC12D_RS00475 f728f05da8cba55365f96614a613e564 284 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 1.9E-34 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC12D_RS04090 736ed174f0d15a9110aa34ac8daf9ba6 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.3E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS04090 736ed174f0d15a9110aa34ac8daf9ba6 302 Pfam PF03466 LysR substrate binding domain 85 287 1.9E-41 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC12D_RS04090 736ed174f0d15a9110aa34ac8daf9ba6 302 SUPERFAMILY SSF46785 1 109 6.45E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS04090 736ed174f0d15a9110aa34ac8daf9ba6 302 PANTHER PTHR30126:SF31 1 287 1.3E-91 T 22-04-2016 RPIC12D_RS04090 736ed174f0d15a9110aa34ac8daf9ba6 302 Gene3D G3DSA:3.40.190.10 182 260 2.8E-13 T 22-04-2016 RPIC12D_RS04090 736ed174f0d15a9110aa34ac8daf9ba6 302 PANTHER PTHR30126 1 287 1.3E-91 T 22-04-2016 RPIC12D_RS04090 736ed174f0d15a9110aa34ac8daf9ba6 302 SUPERFAMILY SSF53850 86 288 2.84E-38 T 22-04-2016 RPIC12D_RS04090 736ed174f0d15a9110aa34ac8daf9ba6 302 Gene3D G3DSA:1.10.10.10 1 84 7.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS04090 736ed174f0d15a9110aa34ac8daf9ba6 302 Gene3D G3DSA:3.40.190.10 87 181 7.6E-20 T 22-04-2016 RPIC12D_RS04090 736ed174f0d15a9110aa34ac8daf9ba6 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS04090 736ed174f0d15a9110aa34ac8daf9ba6 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS04090 736ed174f0d15a9110aa34ac8daf9ba6 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC12D_RS00755 81cffa274cbd4ff5f085a506372f6cb2 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS00755 81cffa274cbd4ff5f085a506372f6cb2 210 Gene3D G3DSA:1.10.10.10 120 209 5.9E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS00755 81cffa274cbd4ff5f085a506372f6cb2 210 SUPERFAMILY SSF46894 140 209 4.08E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS00755 81cffa274cbd4ff5f085a506372f6cb2 210 SUPERFAMILY SSF52172 1 133 2.42E-37 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS00755 81cffa274cbd4ff5f085a506372f6cb2 210 SMART SM00421 146 203 1.1E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS00755 81cffa274cbd4ff5f085a506372f6cb2 210 PANTHER PTHR26402:SF151 2 209 2.3E-71 T 22-04-2016 RPIC12D_RS00755 81cffa274cbd4ff5f085a506372f6cb2 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 1.1E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS00755 81cffa274cbd4ff5f085a506372f6cb2 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 3.3E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS00755 81cffa274cbd4ff5f085a506372f6cb2 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 3.3E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS00755 81cffa274cbd4ff5f085a506372f6cb2 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 3.3E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC12D_RS00755 81cffa274cbd4ff5f085a506372f6cb2 210 Pfam PF00072 Response regulator receiver domain 4 116 4.2E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS00755 81cffa274cbd4ff5f085a506372f6cb2 210 PANTHER PTHR26402 2 209 2.3E-71 T 22-04-2016 RPIC12D_RS00755 81cffa274cbd4ff5f085a506372f6cb2 210 Gene3D G3DSA:3.40.50.2300 1 119 1.1E-38 T 22-04-2016 RPIC12D_RS00755 81cffa274cbd4ff5f085a506372f6cb2 210 SMART SM00448 2 115 1.8E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS00275 8648b03bd6e473a82834e22aab1778f4 579 Gene3D G3DSA:1.20.1600.10 164 579 2.0E-104 T 22-04-2016 RPIC12D_RS00275 8648b03bd6e473a82834e22aab1778f4 579 PANTHER PTHR30203 88 579 4.0E-98 T 22-04-2016 RPIC12D_RS00275 8648b03bd6e473a82834e22aab1778f4 579 PANTHER PTHR30203:SF3 88 579 4.0E-98 T 22-04-2016 RPIC12D_RS00275 8648b03bd6e473a82834e22aab1778f4 579 SUPERFAMILY SSF56954 166 579 8.89E-106 T 22-04-2016 RPIC12D_RS00275 8648b03bd6e473a82834e22aab1778f4 579 SUPERFAMILY SSF56954 105 130 8.89E-106 T 22-04-2016 RPIC12D_RS00275 8648b03bd6e473a82834e22aab1778f4 579 Pfam PF02321 Outer membrane efflux protein 393 575 5.3E-30 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC12D_RS00275 8648b03bd6e473a82834e22aab1778f4 579 Pfam PF02321 Outer membrane efflux protein 175 366 4.0E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC12D_RS00275 8648b03bd6e473a82834e22aab1778f4 579 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 110 577 4.0E-129 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RPIC12D_RS18425 e6d16b25d2a0e451d2bfec5c80df54bc 249 SUPERFAMILY SSF51621 103 249 2.67E-41 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS18425 e6d16b25d2a0e451d2bfec5c80df54bc 249 PANTHER PTHR22931 10 249 3.2E-76 T 22-04-2016 RPIC12D_RS18425 e6d16b25d2a0e451d2bfec5c80df54bc 249 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 38 49 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RPIC12D_RS18425 e6d16b25d2a0e451d2bfec5c80df54bc 249 SUPERFAMILY SSF52009 6 98 7.06E-29 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC12D_RS18425 e6d16b25d2a0e451d2bfec5c80df54bc 249 Gene3D G3DSA:3.20.20.60 110 249 8.2E-40 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS18425 e6d16b25d2a0e451d2bfec5c80df54bc 249 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 105 249 3.7E-46 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RPIC12D_RS18425 e6d16b25d2a0e451d2bfec5c80df54bc 249 Gene3D G3DSA:3.50.30.10 7 109 8.3E-35 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC12D_RS18425 e6d16b25d2a0e451d2bfec5c80df54bc 249 PANTHER PTHR22931:SF28 10 249 3.2E-76 T 22-04-2016 RPIC12D_RS18425 e6d16b25d2a0e451d2bfec5c80df54bc 249 Pfam PF00391 PEP-utilising enzyme, mobile domain 7 79 4.3E-23 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC12D_RS24210 89b9a4e0eebbd6ab7ffed974ed4b9b60 72 Gene3D G3DSA:3.40.50.2300 1 71 1.3E-15 T 22-04-2016 RPIC12D_RS24210 89b9a4e0eebbd6ab7ffed974ed4b9b60 72 PANTHER PTHR30483 1 72 4.6E-21 T 22-04-2016 RPIC12D_RS24210 89b9a4e0eebbd6ab7ffed974ed4b9b60 72 SUPERFAMILY SSF53822 1 71 4.04E-17 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS24210 89b9a4e0eebbd6ab7ffed974ed4b9b60 72 PANTHER PTHR30483:SF7 1 72 4.6E-21 T 22-04-2016 RPIC12D_RS24210 89b9a4e0eebbd6ab7ffed974ed4b9b60 72 Pfam PF13458 Periplasmic binding protein 1 71 1.1E-13 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC12D_RS05910 ccf8d9b87bfa4a306a569e64bfc7a1bd 324 Pfam PF04116 Fatty acid hydroxylase superfamily 135 279 9.5E-34 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 RPIC12D_RS08250 182a9b9791ed3f8a7be1de2712c0b1b1 143 Gene3D G3DSA:1.10.1660.10 18 89 2.4E-17 T 22-04-2016 RPIC12D_RS08250 182a9b9791ed3f8a7be1de2712c0b1b1 143 SUPERFAMILY SSF46955 19 95 7.78E-18 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC12D_RS08250 182a9b9791ed3f8a7be1de2712c0b1b1 143 PANTHER PTHR30204 13 90 6.7E-27 T 22-04-2016 RPIC12D_RS08250 182a9b9791ed3f8a7be1de2712c0b1b1 143 Pfam PF13411 MerR HTH family regulatory protein 21 90 2.0E-21 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS08250 182a9b9791ed3f8a7be1de2712c0b1b1 143 PANTHER PTHR30204:SF15 13 90 6.7E-27 T 22-04-2016 RPIC12D_RS08250 182a9b9791ed3f8a7be1de2712c0b1b1 143 SMART SM00422 21 91 4.7E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS07650 58bb558e2eaa49c91f5a396e0c298bde 404 Pfam PF00144 Beta-lactamase 86 377 3.5E-30 T 22-04-2016 IPR001466 Beta-lactamase-related RPIC12D_RS07650 58bb558e2eaa49c91f5a396e0c298bde 404 PANTHER PTHR22935 77 382 7.2E-64 T 22-04-2016 RPIC12D_RS07650 58bb558e2eaa49c91f5a396e0c298bde 404 PANTHER PTHR22935:SF2 77 382 7.2E-64 T 22-04-2016 RPIC12D_RS07650 58bb558e2eaa49c91f5a396e0c298bde 404 SUPERFAMILY SSF56601 30 394 7.77E-67 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS07650 58bb558e2eaa49c91f5a396e0c298bde 404 Gene3D G3DSA:3.40.710.10 82 377 7.1E-39 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS04055 a665628deb6215130fae44ccbdaf6a9c 406 SUPERFAMILY SSF89796 1 406 3.01E-149 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS04055 a665628deb6215130fae44ccbdaf6a9c 406 Pfam PF02515 CoA-transferase family III 4 382 8.5E-135 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RPIC12D_RS04055 a665628deb6215130fae44ccbdaf6a9c 406 Gene3D G3DSA:3.30.1540.10 232 314 1.5E-35 T 22-04-2016 RPIC12D_RS04055 a665628deb6215130fae44ccbdaf6a9c 406 PANTHER PTHR24023 61 393 1.6E-38 T 22-04-2016 RPIC12D_RS04055 a665628deb6215130fae44ccbdaf6a9c 406 PANTHER PTHR24023:SF593 61 393 1.6E-38 T 22-04-2016 RPIC12D_RS04055 a665628deb6215130fae44ccbdaf6a9c 406 Gene3D G3DSA:3.40.50.10540 2 226 4.1E-124 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS04055 a665628deb6215130fae44ccbdaf6a9c 406 Gene3D G3DSA:3.40.50.10540 315 406 4.1E-124 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS03780 55fd63211bbc97df6ef5ea143eb69bec 324 Gene3D G3DSA:3.40.50.720 109 285 6.4E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS03780 55fd63211bbc97df6ef5ea143eb69bec 324 PANTHER PTHR10996 1 319 2.3E-141 T 22-04-2016 RPIC12D_RS03780 55fd63211bbc97df6ef5ea143eb69bec 324 SUPERFAMILY SSF51735 95 283 1.21E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS03780 55fd63211bbc97df6ef5ea143eb69bec 324 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 143 171 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RPIC12D_RS03780 55fd63211bbc97df6ef5ea143eb69bec 324 PANTHER PTHR10996:SF118 1 319 2.3E-141 T 22-04-2016 RPIC12D_RS03780 55fd63211bbc97df6ef5ea143eb69bec 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 314 5.9E-27 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RPIC12D_RS03780 55fd63211bbc97df6ef5ea143eb69bec 324 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 221 237 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RPIC12D_RS03780 55fd63211bbc97df6ef5ea143eb69bec 324 Gene3D G3DSA:3.40.50.720 2 108 1.4E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS03780 55fd63211bbc97df6ef5ea143eb69bec 324 SUPERFAMILY SSF52283 1 129 2.65E-28 T 22-04-2016 RPIC12D_RS03780 55fd63211bbc97df6ef5ea143eb69bec 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 103 282 6.4E-66 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RPIC12D_RS09580 46dc49a12d6bb0e25a4aff2a61055e66 215 Pfam PF02666 Phosphatidylserine decarboxylase 44 209 2.1E-32 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 RPIC12D_RS09580 46dc49a12d6bb0e25a4aff2a61055e66 215 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 9 215 38.594 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 RPIC12D_RS09580 46dc49a12d6bb0e25a4aff2a61055e66 215 PANTHER PTHR35809 1 215 2.7E-65 T 22-04-2016 RPIC12D_RS09580 46dc49a12d6bb0e25a4aff2a61055e66 215 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 9 213 6.9E-71 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 RPIC12D_RS16180 2637344daa271044216613cc9e204e99 75 Pfam PF12512 Protein of unknown function (DUF3717) 6 70 2.3E-29 T 22-04-2016 IPR022191 Protein of unknown function DUF3717 RPIC12D_RS14820 f6c06bfc5139e243403b4f3c109d1001 576 Pfam PF08486 Stage II sporulation protein 342 419 6.2E-6 T 22-04-2016 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal RPIC12D_RS14820 f6c06bfc5139e243403b4f3c109d1001 576 Pfam PF10062 Predicted secreted protein (DUF2300) 434 555 4.7E-39 T 22-04-2016 IPR018748 Domain of unknown function DUF2300, secreted RPIC12D_RS14820 f6c06bfc5139e243403b4f3c109d1001 576 Pfam PF10062 Predicted secreted protein (DUF2300) 105 228 1.8E-35 T 22-04-2016 IPR018748 Domain of unknown function DUF2300, secreted RPIC12D_RS14820 f6c06bfc5139e243403b4f3c109d1001 576 SUPERFAMILY SSF56601 54 228 9.21E-7 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS13305 a887f7911a05ef4f6f9c5acdbbcc3a89 103 PANTHER PTHR21349 1 102 2.3E-47 T 22-04-2016 RPIC12D_RS13305 a887f7911a05ef4f6f9c5acdbbcc3a89 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 9.7E-38 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS13305 a887f7911a05ef4f6f9c5acdbbcc3a89 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.7E-42 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 RPIC12D_RS13305 a887f7911a05ef4f6f9c5acdbbcc3a89 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS13305 a887f7911a05ef4f6f9c5acdbbcc3a89 103 SUPERFAMILY SSF141091 1 102 1.31E-39 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 RPIC12D_RS13305 a887f7911a05ef4f6f9c5acdbbcc3a89 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.424 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS07500 c85642c9795b3c5ba096994ff950bd5f 418 SUPERFAMILY SSF53822 30 384 4.0E-70 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS07500 c85642c9795b3c5ba096994ff950bd5f 418 PANTHER PTHR30483 7 417 9.0E-47 T 22-04-2016 RPIC12D_RS07500 c85642c9795b3c5ba096994ff950bd5f 418 Gene3D G3DSA:3.40.50.2300 30 241 4.9E-38 T 22-04-2016 RPIC12D_RS07500 c85642c9795b3c5ba096994ff950bd5f 418 Pfam PF13458 Periplasmic binding protein 31 380 8.3E-70 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC12D_RS10250 ad53b44a084af219ce17448af31471e0 95 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 22 76 7.6E-23 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RPIC12D_RS10250 ad53b44a084af219ce17448af31471e0 95 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 22 82 15.111 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RPIC12D_RS10250 ad53b44a084af219ce17448af31471e0 95 PANTHER PTHR34137 10 95 8.0E-23 T 22-04-2016 RPIC12D_RS10250 ad53b44a084af219ce17448af31471e0 95 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 27 61 1.0E-12 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RPIC12D_RS10250 ad53b44a084af219ce17448af31471e0 95 PIRSF PIRSF006488 9 94 4.0E-27 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RPIC12D_RS10250 ad53b44a084af219ce17448af31471e0 95 SUPERFAMILY SSF116842 18 82 3.79E-20 T 22-04-2016 RPIC12D_RS10250 ad53b44a084af219ce17448af31471e0 95 Gene3D G3DSA:1.10.287.1040 20 86 9.9E-27 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RPIC12D_RS10250 ad53b44a084af219ce17448af31471e0 95 Pfam PF02609 Exonuclease VII small subunit 23 73 7.1E-21 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RPIC12D_RS02045 24122b132f35cb6c796d0636a86170d1 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 4.7E-25 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC12D_RS02045 24122b132f35cb6c796d0636a86170d1 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 131 1.2E-65 T 22-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC12D_RS02045 24122b132f35cb6c796d0636a86170d1 135 Gene3D G3DSA:3.10.180.10 1 126 5.5E-46 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS02045 24122b132f35cb6c796d0636a86170d1 135 PANTHER PTHR10374 1 130 7.8E-62 T 22-04-2016 RPIC12D_RS02045 24122b132f35cb6c796d0636a86170d1 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC12D_RS02045 24122b132f35cb6c796d0636a86170d1 135 SUPERFAMILY SSF54593 1 127 2.15E-34 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS13495 2548b45e9cee0ba4908dff4123b343e2 117 SMART SM00530 17 72 4.6E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC12D_RS13495 2548b45e9cee0ba4908dff4123b343e2 117 PANTHER PTHR10245 8 115 9.6E-15 T 22-04-2016 RPIC12D_RS13495 2548b45e9cee0ba4908dff4123b343e2 117 Gene3D G3DSA:1.10.260.40 10 79 2.4E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS13495 2548b45e9cee0ba4908dff4123b343e2 117 Pfam PF01381 Helix-turn-helix 18 70 1.2E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC12D_RS13495 2548b45e9cee0ba4908dff4123b343e2 117 SUPERFAMILY SSF47413 12 75 1.58E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS04010 fcbac711a89f967796b91a5fa3cbd0be 127 PANTHER PTHR35371 1 124 9.9E-30 T 22-04-2016 RPIC12D_RS04010 fcbac711a89f967796b91a5fa3cbd0be 127 Gene3D G3DSA:1.20.120.550 4 124 1.4E-19 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain RPIC12D_RS04010 fcbac711a89f967796b91a5fa3cbd0be 127 Pfam PF01124 MAPEG family 3 124 8.3E-27 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein RPIC12D_RS04010 fcbac711a89f967796b91a5fa3cbd0be 127 PANTHER PTHR35371:SF1 1 124 9.9E-30 T 22-04-2016 RPIC12D_RS04010 fcbac711a89f967796b91a5fa3cbd0be 127 SUPERFAMILY SSF161084 3 122 6.93E-28 T 22-04-2016 RPIC12D_RS13935 debbad3aae818f9c74ae7eb9b0e87a8c 192 PANTHER PTHR33164 1 172 8.8E-19 T 22-04-2016 RPIC12D_RS13935 debbad3aae818f9c74ae7eb9b0e87a8c 192 SMART SM00347 48 148 7.3E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS13935 debbad3aae818f9c74ae7eb9b0e87a8c 192 Gene3D G3DSA:1.10.10.10 25 163 1.3E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS13935 debbad3aae818f9c74ae7eb9b0e87a8c 192 Pfam PF01047 MarR family 59 112 2.9E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS13935 debbad3aae818f9c74ae7eb9b0e87a8c 192 SUPERFAMILY SSF46785 26 163 4.12E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS12065 e804a0b94829f2f22842338ef5d1119f 507 Gene3D G3DSA:3.40.630.40 276 372 1.6E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RPIC12D_RS12065 e804a0b94829f2f22842338ef5d1119f 507 Gene3D G3DSA:3.40.630.40 420 495 1.6E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RPIC12D_RS12065 e804a0b94829f2f22842338ef5d1119f 507 PANTHER PTHR30404:SF0 262 500 4.9E-98 T 22-04-2016 RPIC12D_RS12065 e804a0b94829f2f22842338ef5d1119f 507 PANTHER PTHR30404:SF0 49 201 4.9E-98 T 22-04-2016 RPIC12D_RS12065 e804a0b94829f2f22842338ef5d1119f 507 PANTHER PTHR30404 262 500 4.9E-98 T 22-04-2016 RPIC12D_RS12065 e804a0b94829f2f22842338ef5d1119f 507 PANTHER PTHR30404 49 201 4.9E-98 T 22-04-2016 RPIC12D_RS12065 e804a0b94829f2f22842338ef5d1119f 507 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 277 492 2.4E-47 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RPIC12D_RS12065 e804a0b94829f2f22842338ef5d1119f 507 Pfam PF11741 AMIN domain 54 157 3.4E-23 T 22-04-2016 IPR021731 AMIN domain RPIC12D_RS12065 e804a0b94829f2f22842338ef5d1119f 507 SUPERFAMILY SSF53187 276 371 1.41E-53 T 22-04-2016 RPIC12D_RS12065 e804a0b94829f2f22842338ef5d1119f 507 SUPERFAMILY SSF53187 419 495 1.41E-53 T 22-04-2016 RPIC12D_RS12065 e804a0b94829f2f22842338ef5d1119f 507 SMART SM00646 337 492 9.0E-60 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RPIC12D_RS06600 10f5eb555e6f93224bbb6fbe27763721 368 Gene3D G3DSA:3.40.50.10540 11 230 2.5E-94 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS06600 10f5eb555e6f93224bbb6fbe27763721 368 Gene3D G3DSA:3.40.50.10540 321 366 2.5E-94 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS06600 10f5eb555e6f93224bbb6fbe27763721 368 SUPERFAMILY SSF89796 12 366 2.35E-109 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC12D_RS06600 10f5eb555e6f93224bbb6fbe27763721 368 Gene3D G3DSA:3.30.1540.10 244 320 3.7E-16 T 22-04-2016 RPIC12D_RS06600 10f5eb555e6f93224bbb6fbe27763721 368 PANTHER PTHR24023:SF545 82 357 2.3E-53 T 22-04-2016 RPIC12D_RS06600 10f5eb555e6f93224bbb6fbe27763721 368 Pfam PF02515 CoA-transferase family III 14 353 1.6E-98 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RPIC12D_RS06600 10f5eb555e6f93224bbb6fbe27763721 368 PANTHER PTHR24023 82 357 2.3E-53 T 22-04-2016 RPIC12D_RS11570 d284bdc88c6919bf9d5336c19819404c 400 SUPERFAMILY SSF103473 8 393 2.49E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS11570 d284bdc88c6919bf9d5336c19819404c 400 Gene3D G3DSA:1.20.1250.20 216 394 3.0E-9 T 22-04-2016 RPIC12D_RS11570 d284bdc88c6919bf9d5336c19819404c 400 Gene3D G3DSA:1.20.1250.20 19 194 1.8E-25 T 22-04-2016 RPIC12D_RS11570 d284bdc88c6919bf9d5336c19819404c 400 PANTHER PTHR23501:SF4 17 395 1.9E-147 T 22-04-2016 RPIC12D_RS11570 d284bdc88c6919bf9d5336c19819404c 400 Pfam PF07690 Major Facilitator Superfamily 23 354 9.6E-33 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS11570 d284bdc88c6919bf9d5336c19819404c 400 PANTHER PTHR23501 17 395 1.9E-147 T 22-04-2016 RPIC12D_RS07875 5dae237a08fba7c64aff1e81e55aaee4 545 Pfam PF08811 Protein of unknown function (DUF1800) 56 447 6.6E-112 T 22-04-2016 IPR014917 Protein of unknown function DUF1800 RPIC12D_RS14450 1f045d772e6eb16296cda29312b7fa2f 103 Pfam PF13466 STAS domain 2 86 4.4E-21 T 22-04-2016 IPR002645 STAS domain RPIC12D_RS14450 1f045d772e6eb16296cda29312b7fa2f 103 Gene3D G3DSA:3.30.750.24 2 93 9.1E-13 T 22-04-2016 IPR002645 STAS domain RPIC12D_RS14450 1f045d772e6eb16296cda29312b7fa2f 103 SUPERFAMILY SSF52091 2 93 3.14E-13 T 22-04-2016 IPR002645 STAS domain RPIC12D_RS13685 cb2a2fd787bafe9779e692b269b227bd 438 Gene3D G3DSA:1.20.1250.20 22 231 2.6E-21 T 22-04-2016 RPIC12D_RS13685 cb2a2fd787bafe9779e692b269b227bd 438 Gene3D G3DSA:1.20.1250.20 250 434 9.0E-21 T 22-04-2016 RPIC12D_RS13685 cb2a2fd787bafe9779e692b269b227bd 438 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 32 423 2.6E-135 T 22-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS13685 cb2a2fd787bafe9779e692b269b227bd 438 Pfam PF00083 Sugar (and other) transporter 27 236 3.1E-25 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RPIC12D_RS13685 cb2a2fd787bafe9779e692b269b227bd 438 SUPERFAMILY SSF103473 20 435 1.02E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS13685 cb2a2fd787bafe9779e692b269b227bd 438 Pfam PF07690 Major Facilitator Superfamily 260 429 4.7E-12 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS13685 cb2a2fd787bafe9779e692b269b227bd 438 PANTHER PTHR23508 22 438 6.0E-204 T 22-04-2016 RPIC12D_RS13685 cb2a2fd787bafe9779e692b269b227bd 438 PANTHER PTHR23508:SF16 22 438 6.0E-204 T 22-04-2016 RPIC12D_RS13685 cb2a2fd787bafe9779e692b269b227bd 438 ProSitePatterns PS00216 Sugar transport proteins signature 1. 306 322 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS01870 487be836a04c5eb162850e8d89f85cce 276 PANTHER PTHR11907:SF10 1 267 4.2E-100 T 22-04-2016 RPIC12D_RS01870 487be836a04c5eb162850e8d89f85cce 276 Gene3D G3DSA:3.60.20.10 1 254 1.3E-66 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS01870 487be836a04c5eb162850e8d89f85cce 276 Pfam PF13230 Glutamine amidotransferases class-II 1 266 3.0E-128 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 RPIC12D_RS01870 487be836a04c5eb162850e8d89f85cce 276 PANTHER PTHR11907 1 267 4.2E-100 T 22-04-2016 RPIC12D_RS01870 487be836a04c5eb162850e8d89f85cce 276 SUPERFAMILY SSF56235 2 252 1.2E-44 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS06035 23ae27bee92d8e8a8456d416e3a181a7 307 SUPERFAMILY SSF46626 113 213 4.95E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS06035 23ae27bee92d8e8a8456d416e3a181a7 307 SUPERFAMILY SSF46626 62 85 4.95E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS06035 23ae27bee92d8e8a8456d416e3a181a7 307 PIRSF PIRSF000006 5 302 3.0E-110 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 RPIC12D_RS06035 23ae27bee92d8e8a8456d416e3a181a7 307 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 44 300 3.0E-85 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 RPIC12D_RS06035 23ae27bee92d8e8a8456d416e3a181a7 307 SUPERFAMILY SSF46626 219 302 1.83E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS06035 23ae27bee92d8e8a8456d416e3a181a7 307 PANTHER PTHR33751:SF1 31 305 1.1E-86 T 22-04-2016 RPIC12D_RS06035 23ae27bee92d8e8a8456d416e3a181a7 307 Gene3D G3DSA:1.10.760.10 67 89 5.1E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS06035 23ae27bee92d8e8a8456d416e3a181a7 307 Gene3D G3DSA:1.10.760.10 128 212 5.1E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS06035 23ae27bee92d8e8a8456d416e3a181a7 307 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 43 89 3.0E-24 T 22-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 RPIC12D_RS06035 23ae27bee92d8e8a8456d416e3a181a7 307 PRINTS PR00605 Class IC cytochrome C signature 143 154 4.3E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RPIC12D_RS06035 23ae27bee92d8e8a8456d416e3a181a7 307 PRINTS PR00605 Class IC cytochrome C signature 273 295 4.3E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RPIC12D_RS06035 23ae27bee92d8e8a8456d416e3a181a7 307 Gene3D G3DSA:1.10.760.10 219 302 1.3E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS06035 23ae27bee92d8e8a8456d416e3a181a7 307 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 220 295 4.3E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS06035 23ae27bee92d8e8a8456d416e3a181a7 307 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 135 207 3.1E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS06035 23ae27bee92d8e8a8456d416e3a181a7 307 PANTHER PTHR33751 31 305 1.1E-86 T 22-04-2016 RPIC12D_RS01910 1510e598e9cf5019dfd647274f19152d 134 PANTHER PTHR35024 6 112 2.7E-24 T 22-04-2016 RPIC12D_RS01910 1510e598e9cf5019dfd647274f19152d 134 Pfam PF04519 Polymer-forming cytoskeletal 13 113 7.5E-27 T 22-04-2016 IPR007607 Protein of unknown function DUF583 RPIC12D_RS04695 d50524ebc43b8370f8fd13dffd8b8c71 398 SUPERFAMILY SSF53383 1 398 7.96E-122 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS04695 d50524ebc43b8370f8fd13dffd8b8c71 398 PRINTS PR00799 Aspartate aminotransferase signature 343 361 9.0E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RPIC12D_RS04695 d50524ebc43b8370f8fd13dffd8b8c71 398 PRINTS PR00799 Aspartate aminotransferase signature 177 196 9.0E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RPIC12D_RS04695 d50524ebc43b8370f8fd13dffd8b8c71 398 PRINTS PR00799 Aspartate aminotransferase signature 208 220 9.0E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RPIC12D_RS04695 d50524ebc43b8370f8fd13dffd8b8c71 398 PRINTS PR00799 Aspartate aminotransferase signature 275 300 9.0E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RPIC12D_RS04695 d50524ebc43b8370f8fd13dffd8b8c71 398 Pfam PF00155 Aminotransferase class I and II 29 394 1.9E-82 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC12D_RS04695 d50524ebc43b8370f8fd13dffd8b8c71 398 PANTHER PTHR11879:SF11 1 397 1.5E-235 T 22-04-2016 RPIC12D_RS04695 d50524ebc43b8370f8fd13dffd8b8c71 398 Gene3D G3DSA:3.40.640.10 47 317 7.4E-109 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS04695 d50524ebc43b8370f8fd13dffd8b8c71 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RPIC12D_RS04695 d50524ebc43b8370f8fd13dffd8b8c71 398 PANTHER PTHR11879 1 397 1.5E-235 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RPIC12D_RS07615 65dc865ed94682552597d2bdf49a55ba 362 Gene3D G3DSA:3.40.50.300 3 241 4.6E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07615 65dc865ed94682552597d2bdf49a55ba 362 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 39 331 1.5E-108 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 RPIC12D_RS07615 65dc865ed94682552597d2bdf49a55ba 362 PANTHER PTHR24220:SF402 9 320 1.4E-164 T 22-04-2016 RPIC12D_RS07615 65dc865ed94682552597d2bdf49a55ba 362 SUPERFAMILY SSF50331 241 361 3.63E-15 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RPIC12D_RS07615 65dc865ed94682552597d2bdf49a55ba 362 Pfam PF00005 ABC transporter 25 166 1.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS07615 65dc865ed94682552597d2bdf49a55ba 362 SMART SM00382 33 217 1.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS07615 65dc865ed94682552597d2bdf49a55ba 362 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS07615 65dc865ed94682552597d2bdf49a55ba 362 SUPERFAMILY SSF52540 8 247 7.64E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07615 65dc865ed94682552597d2bdf49a55ba 362 PANTHER PTHR24220 9 320 1.4E-164 T 22-04-2016 RPIC12D_RS07615 65dc865ed94682552597d2bdf49a55ba 362 Pfam PF08402 TOBE domain 284 361 5.4E-16 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RPIC12D_RS16240 e83ead189b89f1c5e592de1d9f130c3b 84 Gene3D G3DSA:3.30.1070.10 35 83 6.1E-20 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RPIC12D_RS16240 e83ead189b89f1c5e592de1d9f130c3b 84 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 82 1.4E-28 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RPIC12D_RS16240 e83ead189b89f1c5e592de1d9f130c3b 84 SUPERFAMILY SSF55229 35 83 1.83E-14 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RPIC12D_RS16240 e83ead189b89f1c5e592de1d9f130c3b 84 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 18.425 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RPIC12D_RS16240 e83ead189b89f1c5e592de1d9f130c3b 84 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 2.2E-25 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RPIC12D_RS16240 e83ead189b89f1c5e592de1d9f130c3b 84 PANTHER PTHR33404 1 82 3.2E-21 T 22-04-2016 RPIC12D_RS04600 45b5ca61a04bffbeb5d198c8821da969 165 Gene3D G3DSA:3.40.470.10 7 164 5.6E-34 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC12D_RS04600 45b5ca61a04bffbeb5d198c8821da969 165 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 7 157 1.6E-47 T 22-04-2016 IPR026353 Hypoxanthine-DNA glycosylase RPIC12D_RS04600 45b5ca61a04bffbeb5d198c8821da969 165 SMART SM00986 8 161 1.8E-9 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC12D_RS04600 45b5ca61a04bffbeb5d198c8821da969 165 SUPERFAMILY SSF52141 6 164 4.32E-38 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC12D_RS04600 45b5ca61a04bffbeb5d198c8821da969 165 Pfam PF03167 Uracil DNA glycosylase superfamily 9 157 4.6E-13 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC12D_RS04600 45b5ca61a04bffbeb5d198c8821da969 165 SMART SM00987 8 161 1.8E-9 T 22-04-2016 RPIC12D_RS05575 9f9184d33092a6740d82be0f43dcca80 374 PANTHER PTHR30325 21 364 6.5E-156 T 22-04-2016 RPIC12D_RS05575 9f9184d33092a6740d82be0f43dcca80 374 SUPERFAMILY SSF161098 155 342 1.44E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS05575 9f9184d33092a6740d82be0f43dcca80 374 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 62 1.3E-8 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RPIC12D_RS05575 9f9184d33092a6740d82be0f43dcca80 374 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 178 359 1.3E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS05575 9f9184d33092a6740d82be0f43dcca80 374 Gene3D G3DSA:1.10.3720.10 151 356 3.8E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS04650 fdf8765d6c23dd0a46e49b6c7e1d46e0 132 Pfam PF00034 Cytochrome c 29 124 2.9E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS04650 fdf8765d6c23dd0a46e49b6c7e1d46e0 132 SUPERFAMILY SSF46626 6 125 7.93E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS04650 fdf8765d6c23dd0a46e49b6c7e1d46e0 132 Gene3D G3DSA:1.10.760.10 15 125 8.6E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS15390 3b45e96ca71ad6e5ef6a0a900ae46285 919 PANTHER PTHR35882 97 772 8.3E-15 T 22-04-2016 RPIC12D_RS15390 3b45e96ca71ad6e5ef6a0a900ae46285 919 PIRSF PIRSF029570 5 918 0.0 T 22-04-2016 IPR016925 Uncharacterised conserved protein UCP029570 RPIC12D_RS15390 3b45e96ca71ad6e5ef6a0a900ae46285 919 SUPERFAMILY SSF88713 692 761 4.73E-5 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIC12D_RS15390 3b45e96ca71ad6e5ef6a0a900ae46285 919 SUPERFAMILY SSF88713 511 651 4.73E-5 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIC12D_RS15390 3b45e96ca71ad6e5ef6a0a900ae46285 919 SUPERFAMILY SSF51445 97 266 2.53E-12 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RPIC12D_RS08170 a4809659193704c0e037124debeb17fb 154 PANTHER PTHR33164 7 151 4.0E-42 T 22-04-2016 RPIC12D_RS08170 a4809659193704c0e037124debeb17fb 154 SUPERFAMILY SSF46785 8 143 6.02E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08170 a4809659193704c0e037124debeb17fb 154 Pfam PF01047 MarR family 34 90 9.0E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS08170 a4809659193704c0e037124debeb17fb 154 Gene3D G3DSA:1.10.10.10 7 136 6.3E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS08170 a4809659193704c0e037124debeb17fb 154 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 9 137 9.5E-54 T 22-04-2016 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 RPIC12D_RS08170 a4809659193704c0e037124debeb17fb 154 SMART SM00347 27 127 1.2E-20 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS08170 a4809659193704c0e037124debeb17fb 154 PANTHER PTHR33164:SF13 7 151 4.0E-42 T 22-04-2016 RPIC12D_RS15675 6fb363123d396490570908a2b91beb23 103 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 6 102 1.7E-38 T 22-04-2016 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ RPIC12D_RS15675 6fb363123d396490570908a2b91beb23 103 SUPERFAMILY SSF81296 1 102 2.17E-32 T 22-04-2016 IPR014756 Immunoglobulin E-set RPIC12D_RS15675 6fb363123d396490570908a2b91beb23 103 Gene3D G3DSA:2.60.40.10 4 102 8.4E-37 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC12D_RS15675 6fb363123d396490570908a2b91beb23 103 Pfam PF08770 Sulphur oxidation protein SoxZ 7 100 2.0E-35 T 22-04-2016 IPR014880 Sulphur oxidation protein SoxZ RPIC12D_RS10465 c8e2ddbbb84ba860caf24b22e225c92e 453 Pfam PF16963 PelD GGDEF domain 325 449 1.4E-47 T 22-04-2016 IPR031583 PelD, GGDEF domain RPIC12D_RS16440 cf470325d5b4961ef6d92c3a7eb3efb3 375 Pfam PF13609 Gram-negative porin 12 351 3.4E-45 T 22-04-2016 RPIC12D_RS16440 cf470325d5b4961ef6d92c3a7eb3efb3 375 SUPERFAMILY SSF56935 26 375 1.68E-53 T 22-04-2016 RPIC12D_RS16440 cf470325d5b4961ef6d92c3a7eb3efb3 375 Gene3D G3DSA:2.40.160.10 26 375 4.4E-66 T 22-04-2016 IPR023614 Porin domain RPIC12D_RS00920 eb4db274161085296af3d570e536135f 119 Pfam PF11142 Protein of unknown function (DUF2917) 10 71 4.7E-17 T 22-04-2016 IPR021317 Protein of unknown function DUF2917 RPIC12D_RS13900 e49cebfba94941d16cfa7c6b4f86e493 473 SUPERFAMILY SSF56349 384 448 1.65E-10 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC12D_RS13900 e49cebfba94941d16cfa7c6b4f86e493 473 SUPERFAMILY SSF56349 223 348 1.65E-10 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC12D_RS13900 e49cebfba94941d16cfa7c6b4f86e493 473 Gene3D G3DSA:1.10.443.10 223 450 6.1E-14 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS21810 92fb8c8d36cced995762b2b68d81bc93 114 SUPERFAMILY SSF52540 39 99 6.46E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS21810 92fb8c8d36cced995762b2b68d81bc93 114 PANTHER PTHR24220:SF308 1 114 9.8E-26 T 22-04-2016 RPIC12D_RS21810 92fb8c8d36cced995762b2b68d81bc93 114 Gene3D G3DSA:3.40.50.300 40 99 2.6E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS21810 92fb8c8d36cced995762b2b68d81bc93 114 PANTHER PTHR24220 1 114 9.8E-26 T 22-04-2016 RPIC12D_RS21810 92fb8c8d36cced995762b2b68d81bc93 114 Pfam PF00005 ABC transporter 55 97 1.9E-6 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS10425 a673a44602800c795bcd8c6752e09489 231 PANTHER PTHR30085 11 231 9.3E-76 T 22-04-2016 RPIC12D_RS10425 a673a44602800c795bcd8c6752e09489 231 Gene3D G3DSA:1.10.3720.10 15 225 9.7E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS10425 a673a44602800c795bcd8c6752e09489 231 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 121 5.3E-18 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS10425 a673a44602800c795bcd8c6752e09489 231 PANTHER PTHR30085:SF1 11 231 9.3E-76 T 22-04-2016 RPIC12D_RS10425 a673a44602800c795bcd8c6752e09489 231 SUPERFAMILY SSF161098 16 212 3.66E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS10425 a673a44602800c795bcd8c6752e09489 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 225 5.8E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS01685 4c32f893cfe6b7887410e36f86b0196e 278 Pfam PF14489 QueF-like protein 191 266 2.9E-27 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC12D_RS01685 4c32f893cfe6b7887410e36f86b0196e 278 PIRSF PIRSF004750 1 278 9.1E-130 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC12D_RS01685 4c32f893cfe6b7887410e36f86b0196e 278 Gene3D G3DSA:3.30.1130.10 16 133 4.2E-45 T 22-04-2016 RPIC12D_RS01685 4c32f893cfe6b7887410e36f86b0196e 278 Gene3D G3DSA:3.30.1130.10 141 276 6.9E-54 T 22-04-2016 RPIC12D_RS01685 4c32f893cfe6b7887410e36f86b0196e 278 TIGRFAM TIGR03138 QueF: queuine synthase 5 278 9.6E-126 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC12D_RS01685 4c32f893cfe6b7887410e36f86b0196e 278 SUPERFAMILY SSF55620 181 263 3.26E-8 T 22-04-2016 RPIC12D_RS01685 4c32f893cfe6b7887410e36f86b0196e 278 PANTHER PTHR34354:SF1 1 278 1.6E-88 T 22-04-2016 RPIC12D_RS01685 4c32f893cfe6b7887410e36f86b0196e 278 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 16 127 8.7E-48 T 22-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC12D_RS01685 4c32f893cfe6b7887410e36f86b0196e 278 PANTHER PTHR34354 1 278 1.6E-88 T 22-04-2016 RPIC12D_RS01685 4c32f893cfe6b7887410e36f86b0196e 278 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 278 160.565 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC12D_RS06975 3f30b9dbf2c093214a35ae09e55f27ff 275 Pfam PF13714 Phosphoenolpyruvate phosphomutase 11 249 1.1E-68 T 22-04-2016 RPIC12D_RS06975 3f30b9dbf2c093214a35ae09e55f27ff 275 PANTHER PTHR21631:SF18 4 259 5.0E-76 T 22-04-2016 RPIC12D_RS06975 3f30b9dbf2c093214a35ae09e55f27ff 275 Gene3D G3DSA:3.20.20.60 3 231 5.8E-61 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS06975 3f30b9dbf2c093214a35ae09e55f27ff 275 PANTHER PTHR21631 4 259 5.0E-76 T 22-04-2016 RPIC12D_RS06975 3f30b9dbf2c093214a35ae09e55f27ff 275 SUPERFAMILY SSF51621 7 261 4.93E-61 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC12D_RS05835 04cbd68d6e75acf8f4103fa4ce635d37 66 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 9 63 1.5E-23 T 22-04-2016 IPR019201 Protein of unknown function DUF2065 RPIC12D_RS05835 04cbd68d6e75acf8f4103fa4ce635d37 66 PANTHER PTHR38602 1 66 1.4E-12 T 22-04-2016 RPIC12D_RS05835 04cbd68d6e75acf8f4103fa4ce635d37 66 PANTHER PTHR38602:SF1 1 66 1.4E-12 T 22-04-2016 RPIC12D_RS03255 c4cf6898f6e1ea10e0ff3b746ec89265 147 PANTHER PTHR41294:SF1 2 142 1.3E-34 T 22-04-2016 RPIC12D_RS03255 c4cf6898f6e1ea10e0ff3b746ec89265 147 PANTHER PTHR41294 2 142 1.3E-34 T 22-04-2016 RPIC12D_RS03255 c4cf6898f6e1ea10e0ff3b746ec89265 147 Gene3D G3DSA:3.10.180.10 5 114 2.3E-17 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS03255 c4cf6898f6e1ea10e0ff3b746ec89265 147 SUPERFAMILY SSF54593 2 119 2.42E-19 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS12810 ade51a45644c234547f7357c7b994b7e 164 PANTHER PTHR22769:SF14 6 146 9.7E-19 T 22-04-2016 RPIC12D_RS12810 ade51a45644c234547f7357c7b994b7e 164 Gene3D G3DSA:3.90.79.10 7 152 4.6E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS12810 ade51a45644c234547f7357c7b994b7e 164 Pfam PF00293 NUDIX domain 9 126 3.8E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC12D_RS12810 ade51a45644c234547f7357c7b994b7e 164 SUPERFAMILY SSF55811 4 148 9.48E-26 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC12D_RS12810 ade51a45644c234547f7357c7b994b7e 164 PANTHER PTHR22769 6 146 9.7E-19 T 22-04-2016 RPIC12D_RS19055 462eef813755c6695107c25378d9bdfb 204 SUPERFAMILY SSF56024 1 144 2.69E-35 T 22-04-2016 RPIC12D_RS19055 462eef813755c6695107c25378d9bdfb 204 Gene3D G3DSA:3.30.870.10 2 145 1.7E-32 T 22-04-2016 RPIC12D_RS19055 462eef813755c6695107c25378d9bdfb 204 PANTHER PTHR21248:SF5 1 142 1.5E-27 T 22-04-2016 RPIC12D_RS19055 462eef813755c6695107c25378d9bdfb 204 SMART SM00155 79 106 0.0021 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RPIC12D_RS19055 462eef813755c6695107c25378d9bdfb 204 PANTHER PTHR21248 1 142 1.5E-27 T 22-04-2016 RPIC12D_RS19055 462eef813755c6695107c25378d9bdfb 204 Pfam PF13091 PLD-like domain 2 133 8.8E-13 T 22-04-2016 IPR025202 Phospholipase D-like domain RPIC12D_RS16920 e0d05a10e83ea88f81475a7c3f1a94d5 328 PANTHER PTHR30349:SF17 21 328 2.2E-114 T 22-04-2016 RPIC12D_RS16920 e0d05a10e83ea88f81475a7c3f1a94d5 328 Gene3D G3DSA:1.10.443.10 126 319 2.4E-51 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS16920 e0d05a10e83ea88f81475a7c3f1a94d5 328 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 21 327 7.5E-106 T 22-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 RPIC12D_RS16920 e0d05a10e83ea88f81475a7c3f1a94d5 328 SUPERFAMILY SSF47823 16 101 7.46E-14 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal RPIC12D_RS16920 e0d05a10e83ea88f81475a7c3f1a94d5 328 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 325 34.841 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD RPIC12D_RS16920 e0d05a10e83ea88f81475a7c3f1a94d5 328 SUPERFAMILY SSF56349 120 323 3.53E-48 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC12D_RS16920 e0d05a10e83ea88f81475a7c3f1a94d5 328 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 19 100 7.6E-17 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RPIC12D_RS16920 e0d05a10e83ea88f81475a7c3f1a94d5 328 Pfam PF00589 Phage integrase family 127 311 1.5E-38 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS16920 e0d05a10e83ea88f81475a7c3f1a94d5 328 Gene3D G3DSA:1.10.150.130 17 113 3.7E-24 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC12D_RS16920 e0d05a10e83ea88f81475a7c3f1a94d5 328 PANTHER PTHR30349 21 328 2.2E-114 T 22-04-2016 RPIC12D_RS14620 e1dc1c275926221b0a445d4910ef32ec 112 Pfam PF03091 CutA1 divalent ion tolerance protein 9 104 1.4E-31 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 RPIC12D_RS14620 e1dc1c275926221b0a445d4910ef32ec 112 SUPERFAMILY SSF54913 6 108 1.89E-33 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RPIC12D_RS14620 e1dc1c275926221b0a445d4910ef32ec 112 Gene3D G3DSA:3.30.70.830 6 109 1.5E-36 T 22-04-2016 RPIC12D_RS14620 e1dc1c275926221b0a445d4910ef32ec 112 PANTHER PTHR23419 9 112 8.8E-33 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 RPIC12D_RS07910 347452831c3c4c529e0dc8c9050d32f7 252 Gene3D G3DSA:3.90.550.10 10 242 8.3E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS07910 347452831c3c4c529e0dc8c9050d32f7 252 PANTHER PTHR32125:SF4 12 243 1.0E-62 T 22-04-2016 RPIC12D_RS07910 347452831c3c4c529e0dc8c9050d32f7 252 PANTHER PTHR32125 12 243 1.0E-62 T 22-04-2016 RPIC12D_RS07910 347452831c3c4c529e0dc8c9050d32f7 252 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 240 3.6E-67 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS07910 347452831c3c4c529e0dc8c9050d32f7 252 SUPERFAMILY SSF53448 11 240 4.06E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS07910 347452831c3c4c529e0dc8c9050d32f7 252 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 9 243 31.198 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS07910 347452831c3c4c529e0dc8c9050d32f7 252 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 241 3.0E-65 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS07910 347452831c3c4c529e0dc8c9050d32f7 252 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 113 120 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC12D_RS16425 4b69fe4420c4dd72923cfc9fddf07abc 281 PANTHER PTHR35010:SF2 4 276 1.9E-76 T 22-04-2016 RPIC12D_RS16425 4b69fe4420c4dd72923cfc9fddf07abc 281 SMART SM00530 22 95 3.3E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC12D_RS16425 4b69fe4420c4dd72923cfc9fddf07abc 281 PANTHER PTHR35010 4 276 1.9E-76 T 22-04-2016 RPIC12D_RS16425 4b69fe4420c4dd72923cfc9fddf07abc 281 Pfam PF13560 Helix-turn-helix domain 18 98 1.1E-16 T 22-04-2016 RPIC12D_RS16425 4b69fe4420c4dd72923cfc9fddf07abc 281 Gene3D G3DSA:1.10.260.40 15 94 1.9E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS16425 4b69fe4420c4dd72923cfc9fddf07abc 281 SUPERFAMILY SSF47413 43 94 2.6E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS03125 3ab496342191c9ea42c7ec112e87a9bb 289 PANTHER PTHR32552 5 289 3.1E-69 T 22-04-2016 RPIC12D_RS03125 3ab496342191c9ea42c7ec112e87a9bb 289 SUPERFAMILY SSF53098 114 278 3.16E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS03125 3ab496342191c9ea42c7ec112e87a9bb 289 Pfam PF00665 Integrase core domain 121 234 3.7E-31 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC12D_RS03125 3ab496342191c9ea42c7ec112e87a9bb 289 Gene3D G3DSA:3.30.420.10 115 274 1.1E-43 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS03125 3ab496342191c9ea42c7ec112e87a9bb 289 Pfam PF13276 HTH-like domain 41 96 5.9E-17 T 22-04-2016 IPR025948 HTH-like domain RPIC12D_RS15405 71a5b7cd84aaa38732a20d41f9ef723c 162 PANTHER PTHR33164:SF16 1 162 3.2E-29 T 22-04-2016 RPIC12D_RS15405 71a5b7cd84aaa38732a20d41f9ef723c 162 PANTHER PTHR33164 1 162 3.2E-29 T 22-04-2016 RPIC12D_RS15405 71a5b7cd84aaa38732a20d41f9ef723c 162 Gene3D G3DSA:1.10.10.10 21 161 3.8E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS15405 71a5b7cd84aaa38732a20d41f9ef723c 162 Pfam PF01047 MarR family 55 113 1.1E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS15405 71a5b7cd84aaa38732a20d41f9ef723c 162 SUPERFAMILY SSF46785 22 161 1.95E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS15405 71a5b7cd84aaa38732a20d41f9ef723c 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 1.4E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS15405 71a5b7cd84aaa38732a20d41f9ef723c 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 1.4E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS15405 71a5b7cd84aaa38732a20d41f9ef723c 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 1.4E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS15405 71a5b7cd84aaa38732a20d41f9ef723c 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 1.4E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS15405 71a5b7cd84aaa38732a20d41f9ef723c 162 SMART SM00347 48 148 2.0E-25 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC12D_RS07785 196d48b225c7074d73b18f0b6bc6b443 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 309 326 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS07785 196d48b225c7074d73b18f0b6bc6b443 439 PANTHER PTHR23508 16 432 4.8E-131 T 22-04-2016 RPIC12D_RS07785 196d48b225c7074d73b18f0b6bc6b443 439 Gene3D G3DSA:1.20.1250.20 261 427 1.2E-5 T 22-04-2016 RPIC12D_RS07785 196d48b225c7074d73b18f0b6bc6b443 439 Gene3D G3DSA:1.20.1250.20 39 229 8.1E-18 T 22-04-2016 RPIC12D_RS07785 196d48b225c7074d73b18f0b6bc6b443 439 Pfam PF07690 Major Facilitator Superfamily 38 384 1.6E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS07785 196d48b225c7074d73b18f0b6bc6b443 439 SUPERFAMILY SSF103473 28 428 3.53E-39 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS07785 196d48b225c7074d73b18f0b6bc6b443 439 PANTHER PTHR23508:SF16 16 432 4.8E-131 T 22-04-2016 RPIC12D_RS06000 58aef4824d2b470a0003418cf4a3218e 365 PANTHER PTHR12169:SF11 1 359 1.7E-148 T 22-04-2016 RPIC12D_RS06000 58aef4824d2b470a0003418cf4a3218e 365 SUPERFAMILY SSF52540 47 215 1.04E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS06000 58aef4824d2b470a0003418cf4a3218e 365 PANTHER PTHR12169 1 359 1.7E-148 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 RPIC12D_RS06000 58aef4824d2b470a0003418cf4a3218e 365 Pfam PF03969 AFG1-like ATPase 3 354 8.9E-128 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 RPIC12D_RS06000 58aef4824d2b470a0003418cf4a3218e 365 Gene3D G3DSA:3.40.50.300 12 167 2.1E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10275 563010d9f1e9e790a7644c9217a590ec 292 Gene3D G3DSA:3.40.50.1820 51 289 4.4E-64 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS10275 563010d9f1e9e790a7644c9217a590ec 292 Pfam PF01738 Dienelactone hydrolase family 63 289 1.4E-59 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 RPIC12D_RS10275 563010d9f1e9e790a7644c9217a590ec 292 SUPERFAMILY SSF53474 52 289 9.52E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS10275 563010d9f1e9e790a7644c9217a590ec 292 PANTHER PTHR17630 47 289 6.4E-86 T 22-04-2016 RPIC12D_RS10275 563010d9f1e9e790a7644c9217a590ec 292 PANTHER PTHR17630:SF42 47 289 6.4E-86 T 22-04-2016 RPIC12D_RS25485 e6761c4e7a63e428b37aba600cc084a9 85 SUPERFAMILY SSF52172 2 81 1.12E-16 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS25485 e6761c4e7a63e428b37aba600cc084a9 85 Pfam PF00072 Response regulator receiver domain 4 81 1.7E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC12D_RS25485 e6761c4e7a63e428b37aba600cc084a9 85 PANTHER PTHR24423 2 84 2.1E-21 T 22-04-2016 RPIC12D_RS25485 e6761c4e7a63e428b37aba600cc084a9 85 PANTHER PTHR24423:SF438 2 84 2.1E-21 T 22-04-2016 RPIC12D_RS25485 e6761c4e7a63e428b37aba600cc084a9 85 Gene3D G3DSA:3.40.50.2300 2 81 4.3E-19 T 22-04-2016 RPIC12D_RS05240 f515e743ad04b0d6a9488dbcafb5cec8 76 SUPERFAMILY SSF46955 15 65 3.48E-6 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC12D_RS05240 f515e743ad04b0d6a9488dbcafb5cec8 76 Pfam PF12728 Helix-turn-helix domain 16 65 1.8E-7 T 22-04-2016 RPIC12D_RS05240 f515e743ad04b0d6a9488dbcafb5cec8 76 Gene3D G3DSA:1.10.10.10 15 64 6.7E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS02860 9174e6492dc5a076b7d7304a0c495205 354 Gene3D G3DSA:3.90.25.10 194 349 4.5E-51 T 22-04-2016 RPIC12D_RS02860 9174e6492dc5a076b7d7304a0c495205 354 PANTHER PTHR10366 3 352 4.6E-156 T 22-04-2016 RPIC12D_RS02860 9174e6492dc5a076b7d7304a0c495205 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 338 1.9E-142 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RPIC12D_RS02860 9174e6492dc5a076b7d7304a0c495205 354 SUPERFAMILY SSF51735 4 350 2.56E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02860 9174e6492dc5a076b7d7304a0c495205 354 PANTHER PTHR10366:SF41 3 352 4.6E-156 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RPIC12D_RS02860 9174e6492dc5a076b7d7304a0c495205 354 Gene3D G3DSA:3.40.50.720 4 193 1.3E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02860 9174e6492dc5a076b7d7304a0c495205 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 325 3.9E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS08555 3d094b50ee1ac1328c9b30bc7cdabcfc 277 PRINTS PR00069 Aldo-keto reductase signature 125 142 2.3E-16 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC12D_RS08555 3d094b50ee1ac1328c9b30bc7cdabcfc 277 PRINTS PR00069 Aldo-keto reductase signature 95 113 2.3E-16 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC12D_RS08555 3d094b50ee1ac1328c9b30bc7cdabcfc 277 PRINTS PR00069 Aldo-keto reductase signature 199 223 2.3E-16 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC12D_RS08555 3d094b50ee1ac1328c9b30bc7cdabcfc 277 PRINTS PR00069 Aldo-keto reductase signature 39 63 2.3E-16 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC12D_RS08555 3d094b50ee1ac1328c9b30bc7cdabcfc 277 Gene3D G3DSA:3.20.20.100 3 270 3.2E-80 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RPIC12D_RS08555 3d094b50ee1ac1328c9b30bc7cdabcfc 277 SUPERFAMILY SSF51430 4 267 4.32E-82 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RPIC12D_RS08555 3d094b50ee1ac1328c9b30bc7cdabcfc 277 Pfam PF00248 Aldo/keto reductase family 15 264 7.5E-55 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RPIC12D_RS08555 3d094b50ee1ac1328c9b30bc7cdabcfc 277 PANTHER PTHR11732 1 265 3.2E-110 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RPIC12D_RS07100 9a2644209e585762635809623700776b 298 Pfam PF07728 AAA domain (dynein-related subfamily) 38 192 2.8E-11 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 RPIC12D_RS07100 9a2644209e585762635809623700776b 298 SUPERFAMILY SSF52540 22 278 1.4E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07100 9a2644209e585762635809623700776b 298 Gene3D G3DSA:3.40.50.300 25 220 4.4E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07100 9a2644209e585762635809623700776b 298 PANTHER PTHR22908:SF67 16 291 5.8E-83 T 22-04-2016 RPIC12D_RS07100 9a2644209e585762635809623700776b 298 PANTHER PTHR22908 16 291 5.8E-83 T 22-04-2016 RPIC12D_RS07100 9a2644209e585762635809623700776b 298 SMART SM00382 34 201 2.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS16765 1dc45f311649ed54414e28ba7b38caa3 277 PANTHER PTHR37418 2 276 8.7E-37 T 22-04-2016 RPIC12D_RS16765 1dc45f311649ed54414e28ba7b38caa3 277 Gene3D G3DSA:3.20.20.70 3 276 3.1E-77 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS16765 1dc45f311649ed54414e28ba7b38caa3 277 Pfam PF05853 beta-keto acid cleavage enzyme 4 276 3.0E-67 T 22-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 RPIC12D_RS08975 44723dfa1f8b007f2295e79df6a3528c 113 Gene3D G3DSA:2.60.120.10 12 112 4.5E-8 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS08975 44723dfa1f8b007f2295e79df6a3528c 113 SUPERFAMILY SSF51182 25 99 2.76E-12 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS14365 6246a7ad0a09922fbdf7bdb720eb4915 170 Pfam PF02416 mttA/Hcf106 family 4 40 2.4E-7 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RPIC12D_RS14365 6246a7ad0a09922fbdf7bdb720eb4915 170 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 3 74 5.1E-18 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 RPIC12D_RS14365 6246a7ad0a09922fbdf7bdb720eb4915 170 PANTHER PTHR33162:SF4 1 69 1.2E-15 T 22-04-2016 RPIC12D_RS14365 6246a7ad0a09922fbdf7bdb720eb4915 170 PANTHER PTHR33162 1 69 1.2E-15 T 22-04-2016 RPIC12D_RS14365 6246a7ad0a09922fbdf7bdb720eb4915 170 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 140 16.861 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 RPIC12D_RS14365 6246a7ad0a09922fbdf7bdb720eb4915 170 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.4E-14 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RPIC12D_RS14365 6246a7ad0a09922fbdf7bdb720eb4915 170 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.4E-14 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RPIC12D_RS14365 6246a7ad0a09922fbdf7bdb720eb4915 170 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.4E-14 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RPIC12D_RS01630 e92f6d8780bda8219c33b3d7faa0c951 137 PANTHER PTHR30574 3 136 1.3E-33 T 22-04-2016 RPIC12D_RS01630 e92f6d8780bda8219c33b3d7faa0c951 137 PANTHER PTHR30574:SF1 3 136 1.3E-33 T 22-04-2016 RPIC12D_RS07975 88f6f74b4e80454e2c4130a60cb10437 597 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 73 595 2.0E-228 T 22-04-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 RPIC12D_RS07975 88f6f74b4e80454e2c4130a60cb10437 597 SUPERFAMILY SSF53474 233 533 7.55E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS07975 88f6f74b4e80454e2c4130a60cb10437 597 Gene3D G3DSA:3.40.50.1820 199 566 2.0E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS07975 88f6f74b4e80454e2c4130a60cb10437 597 PANTHER PTHR36837 74 596 1.4E-196 T 22-04-2016 RPIC12D_RS07975 88f6f74b4e80454e2c4130a60cb10437 597 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 106 273 3.2E-70 T 22-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- RPIC12D_RS07975 88f6f74b4e80454e2c4130a60cb10437 597 PANTHER PTHR36837:SF2 74 596 1.4E-196 T 22-04-2016 RPIC12D_RS05055 d1b3222d56c373aa465471ebefdb90f7 235 SUPERFAMILY SSF46894 127 226 1.73E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC12D_RS05055 d1b3222d56c373aa465471ebefdb90f7 235 PANTHER PTHR26402:SF292 1 227 2.7E-28 T 22-04-2016 RPIC12D_RS05055 d1b3222d56c373aa465471ebefdb90f7 235 Gene3D G3DSA:1.10.10.10 129 226 8.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS05055 d1b3222d56c373aa465471ebefdb90f7 235 PANTHER PTHR26402 1 227 2.7E-28 T 22-04-2016 RPIC12D_RS05055 d1b3222d56c373aa465471ebefdb90f7 235 SUPERFAMILY SSF52172 1 133 3.37E-9 T 22-04-2016 IPR011006 CheY-like superfamily RPIC12D_RS05055 d1b3222d56c373aa465471ebefdb90f7 235 Gene3D G3DSA:3.40.50.2300 1 119 1.5E-9 T 22-04-2016 RPIC12D_RS05055 d1b3222d56c373aa465471ebefdb90f7 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 9.9E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS05055 d1b3222d56c373aa465471ebefdb90f7 235 SMART SM00862 149 225 5.8E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC12D_RS07460 f16f57e3f36488fc3f4c860b40574478 213 Gene3D G3DSA:3.40.50.850 6 211 9.0E-63 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RPIC12D_RS07460 f16f57e3f36488fc3f4c860b40574478 213 Pfam PF00857 Isochorismatase family 8 203 1.0E-28 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RPIC12D_RS07460 f16f57e3f36488fc3f4c860b40574478 213 PANTHER PTHR11080:SF2 8 212 2.8E-60 T 22-04-2016 RPIC12D_RS07460 f16f57e3f36488fc3f4c860b40574478 213 SUPERFAMILY SSF52499 6 211 4.71E-45 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RPIC12D_RS07460 f16f57e3f36488fc3f4c860b40574478 213 PANTHER PTHR11080 8 212 2.8E-60 T 22-04-2016 RPIC12D_RS10770 8e9a58e431491fe1d6bc87436b3119a5 196 Gene3D G3DSA:3.40.50.1390 1 121 1.9E-40 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIC12D_RS10770 8e9a58e431491fe1d6bc87436b3119a5 196 SUPERFAMILY SSF53041 1 136 6.67E-43 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIC12D_RS10770 8e9a58e431491fe1d6bc87436b3119a5 196 PANTHER PTHR30461 2 185 1.0E-48 T 22-04-2016 RPIC12D_RS10770 8e9a58e431491fe1d6bc87436b3119a5 196 SMART SM00857 2 137 8.6E-57 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIC12D_RS10770 8e9a58e431491fe1d6bc87436b3119a5 196 ProSitePatterns PS00398 Site-specific recombinases signature 2. 56 68 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RPIC12D_RS10770 8e9a58e431491fe1d6bc87436b3119a5 196 ProDom PD130832 RIIB EARLY PROTECTOR PROPHAGE-INDUCED MEMBRANE FROM LYSIS DNA-BINDING RIIA-RIIB DNA 143 192 0.003 T 22-04-2016 RPIC12D_RS10770 8e9a58e431491fe1d6bc87436b3119a5 196 Gene3D G3DSA:1.10.10.60 139 182 2.5E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS10770 8e9a58e431491fe1d6bc87436b3119a5 196 Pfam PF00239 Resolvase, N terminal domain 3 136 6.4E-43 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIC12D_RS10770 8e9a58e431491fe1d6bc87436b3119a5 196 PANTHER PTHR30461:SF9 2 185 1.0E-48 T 22-04-2016 RPIC12D_RS10770 8e9a58e431491fe1d6bc87436b3119a5 196 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RPIC12D_RS06060 b8ce03e4e100f8fd6221cb168e3ec958 247 PANTHER PTHR42208 1 232 4.9E-22 T 22-04-2016 RPIC12D_RS06060 b8ce03e4e100f8fd6221cb168e3ec958 247 PANTHER PTHR42208:SF1 1 232 4.9E-22 T 22-04-2016 RPIC12D_RS06060 b8ce03e4e100f8fd6221cb168e3ec958 247 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 9 226 3.9E-48 T 22-04-2016 RPIC12D_RS06650 4c035ffd875a8ed5c72cd72f608b3529 122 SUPERFAMILY SSF57625 79 115 3.66E-5 T 22-04-2016 IPR002557 Chitin binding domain GO:0005576|GO:0006030|GO:0008061 RPIC12D_RS06650 4c035ffd875a8ed5c72cd72f608b3529 122 Gene3D G3DSA:2.170.140.10 75 118 2.1E-4 T 22-04-2016 IPR002557 Chitin binding domain GO:0005576|GO:0006030|GO:0008061 RPIC12D_RS16595 5902e0c429cac50449a437d6e3150e3a 246 Pfam PF13468 Glyoxalase-like domain 31 206 8.9E-31 T 22-04-2016 IPR025870 Glyoxalase-like domain RPIC12D_RS16125 4902741d529401ac4226c73547e9c96c 155 Gene3D G3DSA:1.10.1660.10 12 67 1.9E-26 T 22-04-2016 RPIC12D_RS16125 4902741d529401ac4226c73547e9c96c 155 PANTHER PTHR30204:SF16 4 139 1.7E-56 T 22-04-2016 RPIC12D_RS16125 4902741d529401ac4226c73547e9c96c 155 Gene3D G3DSA:1.10.1660.10 68 140 2.1E-30 T 22-04-2016 RPIC12D_RS16125 4902741d529401ac4226c73547e9c96c 155 Pfam PF09278 MerR, DNA binding 56 119 6.4E-21 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding RPIC12D_RS16125 4902741d529401ac4226c73547e9c96c 155 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS16125 4902741d529401ac4226c73547e9c96c 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 48 68 5.8E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS16125 4902741d529401ac4226c73547e9c96c 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 5.8E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS16125 4902741d529401ac4226c73547e9c96c 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 5.8E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS16125 4902741d529401ac4226c73547e9c96c 155 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 12 137 1.6E-58 T 22-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 RPIC12D_RS16125 4902741d529401ac4226c73547e9c96c 155 Pfam PF00376 MerR family regulatory protein 13 50 1.4E-18 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS16125 4902741d529401ac4226c73547e9c96c 155 SUPERFAMILY SSF46955 13 136 2.86E-39 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC12D_RS16125 4902741d529401ac4226c73547e9c96c 155 SMART SM00422 12 81 6.6E-32 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS16125 4902741d529401ac4226c73547e9c96c 155 PANTHER PTHR30204 4 139 1.7E-56 T 22-04-2016 RPIC12D_RS12205 d3c0128a803df6e97fcde21ab6dfb468 114 Pfam PF03927 NapD protein 21 95 1.8E-27 T 22-04-2016 IPR005623 Chaperone NapD, nitrate reductase assembly RPIC12D_RS12205 d3c0128a803df6e97fcde21ab6dfb468 114 PANTHER PTHR38603 1 111 5.2E-18 T 22-04-2016 RPIC12D_RS11335 dbeb2139cf209c245ac9ef8c014c5df3 605 Pfam PF11863 Protein of unknown function (DUF3383) 7 603 1.5E-174 T 22-04-2016 IPR021808 Protein of unknown function DUF3383 RPIC12D_RS02855 94cbfdec43490b2199e590d25fd49892 280 SUPERFAMILY SSF56300 5 252 2.85E-50 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS02855 94cbfdec43490b2199e590d25fd49892 280 PANTHER PTHR24032 7 254 1.8E-81 T 22-04-2016 RPIC12D_RS02855 94cbfdec43490b2199e590d25fd49892 280 PANTHER PTHR24032:SF27 7 254 1.8E-81 T 22-04-2016 RPIC12D_RS02855 94cbfdec43490b2199e590d25fd49892 280 PIRSF PIRSF000903 2 275 5.0E-98 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 RPIC12D_RS02855 94cbfdec43490b2199e590d25fd49892 280 Gene3D G3DSA:3.60.21.10 167 270 2.0E-44 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS02855 94cbfdec43490b2199e590d25fd49892 280 Gene3D G3DSA:3.60.21.10 5 133 2.0E-44 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS02855 94cbfdec43490b2199e590d25fd49892 280 Pfam PF00149 Calcineurin-like phosphoesterase 7 148 3.9E-7 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RPIC12D_RS02855 94cbfdec43490b2199e590d25fd49892 280 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 6 252 2.8E-68 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 RPIC12D_RS08270 1e8f5d5bf9ecc815d3e13befcdf4ab2f 118 Pfam PF00453 Ribosomal protein L20 3 109 1.1E-49 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS08270 1e8f5d5bf9ecc815d3e13befcdf4ab2f 118 SUPERFAMILY SSF74731 2 115 1.03E-49 T 22-04-2016 RPIC12D_RS08270 1e8f5d5bf9ecc815d3e13befcdf4ab2f 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.117 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS08270 1e8f5d5bf9ecc815d3e13befcdf4ab2f 118 PANTHER PTHR10986 2 115 1.2E-63 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS08270 1e8f5d5bf9ecc815d3e13befcdf4ab2f 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.4E-40 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS08270 1e8f5d5bf9ecc815d3e13befcdf4ab2f 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.4E-40 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS08270 1e8f5d5bf9ecc815d3e13befcdf4ab2f 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.4E-40 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS08270 1e8f5d5bf9ecc815d3e13befcdf4ab2f 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 8.8E-50 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS08270 1e8f5d5bf9ecc815d3e13befcdf4ab2f 118 Gene3D G3DSA:1.10.1900.20 55 116 3.8E-31 T 22-04-2016 RPIC12D_RS08270 1e8f5d5bf9ecc815d3e13befcdf4ab2f 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 9.0E-23 T 22-04-2016 RPIC12D_RS08270 1e8f5d5bf9ecc815d3e13befcdf4ab2f 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RPIC12D_RS08355 0e321dac24e1ca28ca5b3c16001610e5 151 PANTHER PTHR11911 1 141 2.2E-28 T 22-04-2016 RPIC12D_RS08355 0e321dac24e1ca28ca5b3c16001610e5 151 Pfam PF00571 CBS domain 15 60 1.2E-8 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS08355 0e321dac24e1ca28ca5b3c16001610e5 151 Pfam PF00571 CBS domain 73 126 1.3E-10 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS08355 0e321dac24e1ca28ca5b3c16001610e5 151 SMART SM00116 79 126 1.1E-6 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS08355 0e321dac24e1ca28ca5b3c16001610e5 151 SMART SM00116 13 60 1.4E-7 T 22-04-2016 IPR000644 CBS domain RPIC12D_RS08355 0e321dac24e1ca28ca5b3c16001610e5 151 SUPERFAMILY SSF54631 1 144 2.91E-28 T 22-04-2016 RPIC12D_RS08355 0e321dac24e1ca28ca5b3c16001610e5 151 Gene3D G3DSA:3.10.580.10 1 127 1.0E-28 T 22-04-2016 RPIC12D_RS16010 aa260bc7a232378474a7942a356fc521 182 Pfam PF03899 ATP synthase I chain 68 169 1.6E-17 T 22-04-2016 IPR005598 ATP synthase protein I RPIC12D_RS14510 f879bca53e8abe00ac457bac83a8347b 368 SUPERFAMILY SSF56796 4 355 3.27E-118 T 22-04-2016 RPIC12D_RS14510 f879bca53e8abe00ac457bac83a8347b 368 Gene3D G3DSA:1.20.1090.10 173 355 1.7E-65 T 22-04-2016 RPIC12D_RS14510 f879bca53e8abe00ac457bac83a8347b 368 Pfam PF01761 3-dehydroquinate synthase 67 324 4.3E-107 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC12D_RS14510 f879bca53e8abe00ac457bac83a8347b 368 Gene3D G3DSA:3.40.50.1970 3 172 5.7E-71 T 22-04-2016 RPIC12D_RS14510 f879bca53e8abe00ac457bac83a8347b 368 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 357 42.671 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC12D_RS14510 f879bca53e8abe00ac457bac83a8347b 368 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 350 1.7E-122 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC12D_RS14510 f879bca53e8abe00ac457bac83a8347b 368 PIRSF PIRSF001455 5 360 3.9E-109 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC12D_RS14510 f879bca53e8abe00ac457bac83a8347b 368 PANTHER PTHR21090 1 355 3.5E-191 T 22-04-2016 RPIC12D_RS07600 970fb21122422d4fe8e3b349393fcf80 366 Gene3D G3DSA:1.10.287.110 214 252 3.6E-8 T 22-04-2016 IPR001623 DnaJ domain RPIC12D_RS07600 970fb21122422d4fe8e3b349393fcf80 366 SUPERFAMILY SSF46565 214 252 3.79E-8 T 22-04-2016 IPR001623 DnaJ domain RPIC12D_RS02060 77b02476eb36092b1878814f8c2f9ee2 192 PANTHER PTHR23133 6 179 1.4E-67 T 22-04-2016 RPIC12D_RS02060 77b02476eb36092b1878814f8c2f9ee2 192 Gene3D G3DSA:3.40.50.1000 5 179 3.2E-51 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS02060 77b02476eb36092b1878814f8c2f9ee2 192 Pfam PF08645 Polynucleotide kinase 3 phosphatase 15 120 1.2E-9 T 22-04-2016 IPR013954 Polynucleotide kinase 3 phosphatase RPIC12D_RS02060 77b02476eb36092b1878814f8c2f9ee2 192 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 7 146 4.7E-47 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 RPIC12D_RS02060 77b02476eb36092b1878814f8c2f9ee2 192 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 144 4.4E-35 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RPIC12D_RS02060 77b02476eb36092b1878814f8c2f9ee2 192 SUPERFAMILY SSF56784 5 179 1.96E-42 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS02060 77b02476eb36092b1878814f8c2f9ee2 192 PIRSF PIRSF004682 1 183 1.2E-52 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 RPIC12D_RS02060 77b02476eb36092b1878814f8c2f9ee2 192 PANTHER PTHR23133:SF7 6 179 1.4E-67 T 22-04-2016 RPIC12D_RS11930 9a06f92af6fc59a6dc44bf8ec2f341be 466 PANTHER PTHR30354:SF7 1 466 9.9E-235 T 22-04-2016 RPIC12D_RS11930 9a06f92af6fc59a6dc44bf8ec2f341be 466 PANTHER PTHR30354 1 466 9.9E-235 T 22-04-2016 RPIC12D_RS03625 13a375906cf617b346aabd212e530f65 144 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 142 1.1E-27 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS03625 13a375906cf617b346aabd212e530f65 144 PANTHER PTHR30558 1 140 1.1E-31 T 22-04-2016 RPIC12D_RS03625 13a375906cf617b346aabd212e530f65 144 TIGRFAM TIGR02801 tolR: protein TolR 14 141 4.6E-41 T 22-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 RPIC12D_RS03625 13a375906cf617b346aabd212e530f65 144 PANTHER PTHR30558:SF7 1 140 1.1E-31 T 22-04-2016 RPIC12D_RS05780 01fac4c492790c55b3841bc59f7295fb 265 Pfam PF13181 Tetratricopeptide repeat 152 184 0.0024 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS05780 01fac4c492790c55b3841bc59f7295fb 265 Pfam PF13181 Tetratricopeptide repeat 81 113 1.0E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS05780 01fac4c492790c55b3841bc59f7295fb 265 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 9 250 1.4E-80 T 22-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW RPIC12D_RS05780 01fac4c492790c55b3841bc59f7295fb 265 PANTHER PTHR23083 50 254 8.0E-26 T 22-04-2016 RPIC12D_RS05780 01fac4c492790c55b3841bc59f7295fb 265 SUPERFAMILY SSF48452 157 209 5.69E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS05780 01fac4c492790c55b3841bc59f7295fb 265 SUPERFAMILY SSF48452 51 130 5.69E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS05780 01fac4c492790c55b3841bc59f7295fb 265 SMART SM00028 151 184 6.2E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS05780 01fac4c492790c55b3841bc59f7295fb 265 SMART SM00028 46 79 6.3 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS05780 01fac4c492790c55b3841bc59f7295fb 265 SMART SM00028 80 113 0.021 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC12D_RS05780 01fac4c492790c55b3841bc59f7295fb 265 Gene3D G3DSA:1.25.40.10 49 237 2.7E-31 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS14360 5c468bb1ac9c49a4594e437fe2ea8888 267 PANTHER PTHR30371:SF0 2 260 3.1E-97 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIC12D_RS14360 5c468bb1ac9c49a4594e437fe2ea8888 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 19 46 1.2E-43 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIC12D_RS14360 5c468bb1ac9c49a4594e437fe2ea8888 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 114 140 1.2E-43 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIC12D_RS14360 5c468bb1ac9c49a4594e437fe2ea8888 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 96 114 1.2E-43 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIC12D_RS14360 5c468bb1ac9c49a4594e437fe2ea8888 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 166 194 1.2E-43 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIC12D_RS14360 5c468bb1ac9c49a4594e437fe2ea8888 267 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 21 238 9.2E-66 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIC12D_RS14360 5c468bb1ac9c49a4594e437fe2ea8888 267 Pfam PF00902 Sec-independent protein translocase protein (TatC) 23 233 6.7E-66 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIC12D_RS14360 5c468bb1ac9c49a4594e437fe2ea8888 267 PANTHER PTHR30371 2 260 3.1E-97 T 22-04-2016 RPIC12D_RS14360 5c468bb1ac9c49a4594e437fe2ea8888 267 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 9 252 18.199 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIC12D_RS01560 45d33115ad3efce8df1e45c399dd244b 267 SUPERFAMILY SSF53901 7 153 8.32E-11 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC12D_RS01560 45d33115ad3efce8df1e45c399dd244b 267 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 38 199 3.8E-26 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RPIC12D_RS14565 d62cdeee8554632571d45fa423bb1b3a 218 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 6 207 26.149 T 22-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 RPIC12D_RS14565 d62cdeee8554632571d45fa423bb1b3a 218 PANTHER PTHR36964 4 215 2.0E-51 T 22-04-2016 RPIC12D_RS14565 d62cdeee8554632571d45fa423bb1b3a 218 Pfam PF01794 Ferric reductase like transmembrane component 52 166 1.0E-17 T 22-04-2016 IPR013130 Ferric reductase transmembrane component-like domain RPIC12D_RS02905 4370ee3c216ab491fbb0fcb381b25b40 256 SUPERFAMILY SSF53448 3 203 3.15E-30 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS02905 4370ee3c216ab491fbb0fcb381b25b40 256 PANTHER PTHR21485 1 183 2.8E-24 T 22-04-2016 RPIC12D_RS02905 4370ee3c216ab491fbb0fcb381b25b40 256 Gene3D G3DSA:3.90.550.10 1 205 2.4E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS02905 4370ee3c216ab491fbb0fcb381b25b40 256 PANTHER PTHR21485:SF16 1 183 2.8E-24 T 22-04-2016 RPIC12D_RS02905 4370ee3c216ab491fbb0fcb381b25b40 256 Pfam PF02348 Cytidylyltransferase 4 179 6.3E-28 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RPIC12D_RS06045 7f3c22361e97b01541d8d440da7aa210 75 Pfam PF05751 FixH 15 60 5.5E-7 T 22-04-2016 IPR008620 Nitrogen fixation protein FixH RPIC12D_RS01600 ae7c39a6a85c4bb3e143567cade44700 86 Gene3D G3DSA:1.10.1200.10 2 84 1.9E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RPIC12D_RS01600 ae7c39a6a85c4bb3e143567cade44700 86 Pfam PF00550 Phosphopantetheine attachment site 8 79 1.6E-6 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RPIC12D_RS01600 ae7c39a6a85c4bb3e143567cade44700 86 SUPERFAMILY SSF47336 1 83 1.57E-10 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RPIC12D_RS10920 f06acd579d60a70050057fc6a9451798 239 Pfam PF10099 Anti-sigma-K factor rskA 71 232 2.6E-26 T 22-04-2016 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 RPIC12D_RS15170 17ac8e635253e4bd6ed50b1364c08e0a 103 Gene3D G3DSA:4.10.490.10 30 103 1.2E-33 T 22-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 RPIC12D_RS15170 17ac8e635253e4bd6ed50b1364c08e0a 103 Pfam PF01355 High potential iron-sulfur protein 36 100 2.6E-26 T 22-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 RPIC12D_RS15170 17ac8e635253e4bd6ed50b1364c08e0a 103 SUPERFAMILY SSF57652 25 103 5.49E-28 T 22-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 RPIC12D_RS12725 7ce1623a7741aba828606099350f8d01 336 Pfam PF01699 Sodium/calcium exchanger protein 5 158 8.9E-14 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 RPIC12D_RS12725 7ce1623a7741aba828606099350f8d01 336 Pfam PF01699 Sodium/calcium exchanger protein 191 328 3.6E-11 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 RPIC12D_RS07955 eda0e99ceccdc1af4578886ec02ae8da 326 PANTHER PTHR11082 1 315 1.0E-123 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC12D_RS07955 eda0e99ceccdc1af4578886ec02ae8da 326 PANTHER PTHR11082:SF26 1 315 1.0E-123 T 22-04-2016 RPIC12D_RS07955 eda0e99ceccdc1af4578886ec02ae8da 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 93 111 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC12D_RS07955 eda0e99ceccdc1af4578886ec02ae8da 326 SUPERFAMILY SSF51395 3 314 3.85E-69 T 22-04-2016 RPIC12D_RS07955 eda0e99ceccdc1af4578886ec02ae8da 326 Gene3D G3DSA:3.20.20.70 3 244 1.0E-63 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC12D_RS07955 eda0e99ceccdc1af4578886ec02ae8da 326 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 9 314 51.154 T 22-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 RPIC12D_RS07955 eda0e99ceccdc1af4578886ec02ae8da 326 Pfam PF01207 Dihydrouridine synthase (Dus) 6 306 6.2E-68 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC12D_RS07955 eda0e99ceccdc1af4578886ec02ae8da 326 PIRSF PIRSF006621 1 324 6.5E-87 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC12D_RS08490 d76f5a92bd0f4633ef36769d9953b375 275 PIRSF PIRSF029288 6 275 2.1E-92 T 22-04-2016 IPR009211 Predicted virulence protein, SciE type RPIC12D_RS08490 d76f5a92bd0f4633ef36769d9953b375 275 Pfam PF07024 ImpE protein 154 271 9.0E-44 T 22-04-2016 IPR009211 Predicted virulence protein, SciE type RPIC12D_RS08490 d76f5a92bd0f4633ef36769d9953b375 275 Gene3D G3DSA:1.25.40.10 16 84 2.6E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS08490 d76f5a92bd0f4633ef36769d9953b375 275 SUPERFAMILY SSF144059 20 273 2.48E-87 T 22-04-2016 RPIC12D_RS12270 ef4fe611e18801dac5da5309df3ed008 87 Pfam PF02805 Metal binding domain of Ada 24 74 3.4E-6 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RPIC12D_RS12270 ef4fe611e18801dac5da5309df3ed008 87 Gene3D G3DSA:3.40.10.10 21 82 6.1E-17 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RPIC12D_RS12270 ef4fe611e18801dac5da5309df3ed008 87 SUPERFAMILY SSF57884 21 82 2.75E-14 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RPIC12D_RS10290 636fa6fe3fb1156269244f55843d28d8 317 PANTHER PTHR31223 65 301 1.3E-89 T 22-04-2016 RPIC12D_RS10290 636fa6fe3fb1156269244f55843d28d8 317 PANTHER PTHR31223:SF1 65 301 1.3E-89 T 22-04-2016 RPIC12D_RS10290 636fa6fe3fb1156269244f55843d28d8 317 Gene3D G3DSA:3.40.50.450 101 304 7.9E-63 T 22-04-2016 RPIC12D_RS10290 636fa6fe3fb1156269244f55843d28d8 317 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 123 296 4.8E-44 T 22-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RPIC12D_RS10290 636fa6fe3fb1156269244f55843d28d8 317 SUPERFAMILY SSF102405 98 295 2.9E-57 T 22-04-2016 RPIC12D_RS10290 636fa6fe3fb1156269244f55843d28d8 317 Pfam PF03641 Possible lysine decarboxylase 165 294 1.6E-31 T 22-04-2016 IPR031100 LOG family RPIC12D_RS00175 851ea97e37d2f19879636b63491dfc64 225 Pfam PF00156 Phosphoribosyl transferase domain 47 161 9.8E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIC12D_RS00175 851ea97e37d2f19879636b63491dfc64 225 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 14 194 3.0E-53 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS00175 851ea97e37d2f19879636b63491dfc64 225 SUPERFAMILY SSF53271 8 202 1.12E-44 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS00175 851ea97e37d2f19879636b63491dfc64 225 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 225 31.75 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS00175 851ea97e37d2f19879636b63491dfc64 225 PANTHER PTHR19278:SF36 8 225 1.9E-88 T 22-04-2016 RPIC12D_RS00175 851ea97e37d2f19879636b63491dfc64 225 Gene3D G3DSA:3.40.50.2020 10 221 1.5E-73 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS00175 851ea97e37d2f19879636b63491dfc64 225 PANTHER PTHR19278 8 225 1.9E-88 T 22-04-2016 RPIC12D_RS19020 54abf96a112ce57db7b218bc773ce479 230 SUPERFAMILY SSF53335 124 230 4.62E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS19020 54abf96a112ce57db7b218bc773ce479 230 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 125 230 2.8E-24 T 22-04-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67 RPIC12D_RS19020 54abf96a112ce57db7b218bc773ce479 230 Gene3D G3DSA:3.40.50.150 139 230 2.7E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS03835 67f1437abaada248d425bd680bfd40f5 91 PANTHER PTHR35893:SF3 1 91 3.1E-24 T 22-04-2016 RPIC12D_RS03835 67f1437abaada248d425bd680bfd40f5 91 PANTHER PTHR35893 1 91 3.1E-24 T 22-04-2016 RPIC12D_RS03835 67f1437abaada248d425bd680bfd40f5 91 Pfam PF05957 Bacterial protein of unknown function (DUF883) 2 91 1.1E-33 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB RPIC12D_RS10475 c0aedaf460d2a70c103d2cbfa54332f8 1343 Gene3D G3DSA:1.25.40.10 741 804 2.8E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS10475 c0aedaf460d2a70c103d2cbfa54332f8 1343 Gene3D G3DSA:1.25.40.10 642 706 2.8E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS10475 c0aedaf460d2a70c103d2cbfa54332f8 1343 Pfam PF13429 Tetratricopeptide repeat 531 811 2.8E-88 T 22-04-2016 RPIC12D_RS10475 c0aedaf460d2a70c103d2cbfa54332f8 1343 Gene3D G3DSA:1.25.40.10 364 601 3.2E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS10160 7edca4286a0200fd8542b9a2a5328bb5 271 SUPERFAMILY SSF56281 27 241 1.83E-28 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS10160 7edca4286a0200fd8542b9a2a5328bb5 271 Gene3D G3DSA:3.60.15.10 27 241 2.0E-47 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS10160 7edca4286a0200fd8542b9a2a5328bb5 271 Pfam PF00753 Metallo-beta-lactamase superfamily 27 221 1.8E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS10160 7edca4286a0200fd8542b9a2a5328bb5 271 PANTHER PTHR32145 4 251 9.5E-72 T 22-04-2016 RPIC12D_RS10160 7edca4286a0200fd8542b9a2a5328bb5 271 PANTHER PTHR32145:SF7 4 251 9.5E-72 T 22-04-2016 RPIC12D_RS10160 7edca4286a0200fd8542b9a2a5328bb5 271 SMART SM00849 29 221 3.2E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC12D_RS02920 7867a89bf8651aec09d072afb8e9717f 188 TIGRFAM TIGR03585 PseH: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 9 162 3.5E-35 T 22-04-2016 IPR020036 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase RPIC12D_RS02920 7867a89bf8651aec09d072afb8e9717f 188 Gene3D G3DSA:3.40.630.30 5 171 7.8E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS02920 7867a89bf8651aec09d072afb8e9717f 188 PANTHER PTHR13256 5 188 7.4E-21 T 22-04-2016 RPIC12D_RS02920 7867a89bf8651aec09d072afb8e9717f 188 SUPERFAMILY SSF55729 5 164 4.56E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC12D_RS02920 7867a89bf8651aec09d072afb8e9717f 188 Pfam PF13302 Acetyltransferase (GNAT) domain 8 141 1.7E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC12D_RS08775 bb916d953e5a5e5f1ef997661e732099 640 Gene3D G3DSA:3.40.50.300 75 154 6.2E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08775 bb916d953e5a5e5f1ef997661e732099 640 Gene3D G3DSA:3.40.50.300 239 325 6.2E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08775 bb916d953e5a5e5f1ef997661e732099 640 SMART SM00763 19 376 4.2E-215 T 22-04-2016 IPR013153 PrkA AAA domain RPIC12D_RS08775 bb916d953e5a5e5f1ef997661e732099 640 PIRSF PIRSF000549 1 640 1.2E-287 T 22-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 RPIC12D_RS08775 bb916d953e5a5e5f1ef997661e732099 640 Pfam PF08298 PrkA AAA domain 20 376 6.6E-174 T 22-04-2016 IPR013153 PrkA AAA domain RPIC12D_RS08775 bb916d953e5a5e5f1ef997661e732099 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 1.4E-69 T 22-04-2016 IPR010650 PrkA C-terminal domain RPIC12D_RS08775 bb916d953e5a5e5f1ef997661e732099 640 SUPERFAMILY SSF52540 75 344 3.38E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS08775 bb916d953e5a5e5f1ef997661e732099 640 PANTHER PTHR30267 1 640 4.9E-269 T 22-04-2016 RPIC12D_RS08775 bb916d953e5a5e5f1ef997661e732099 640 PANTHER PTHR30267:SF2 1 640 4.9E-269 T 22-04-2016 RPIC12D_RS13655 22485146b45f3481bd77faab5c407911 595 Pfam PF00905 Penicillin binding protein transpeptidase domain 267 562 2.3E-69 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RPIC12D_RS13655 22485146b45f3481bd77faab5c407911 595 SUPERFAMILY SSF56601 241 571 6.15E-85 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS13655 22485146b45f3481bd77faab5c407911 595 Gene3D G3DSA:3.40.710.10 248 570 1.2E-81 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC12D_RS13655 22485146b45f3481bd77faab5c407911 595 PANTHER PTHR30627 18 589 7.9E-200 T 22-04-2016 RPIC12D_RS13655 22485146b45f3481bd77faab5c407911 595 Gene3D G3DSA:3.90.1310.10 148 247 8.2E-28 T 22-04-2016 RPIC12D_RS13655 22485146b45f3481bd77faab5c407911 595 Pfam PF03717 Penicillin-binding Protein dimerisation domain 77 225 3.2E-19 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RPIC12D_RS13655 22485146b45f3481bd77faab5c407911 595 PANTHER PTHR30627:SF1 18 589 7.9E-200 T 22-04-2016 RPIC12D_RS13655 22485146b45f3481bd77faab5c407911 595 SUPERFAMILY SSF56519 73 237 1.96E-42 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RPIC12D_RS10700 9d3ca2cf0543c793fa8a6ddf8abce540 202 SUPERFAMILY SSF46626 79 181 9.6E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS10700 9d3ca2cf0543c793fa8a6ddf8abce540 202 Gene3D G3DSA:1.10.760.10 79 190 2.2E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS10700 9d3ca2cf0543c793fa8a6ddf8abce540 202 PRINTS PR00605 Class IC cytochrome C signature 139 161 1.7E-7 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RPIC12D_RS10700 9d3ca2cf0543c793fa8a6ddf8abce540 202 PRINTS PR00605 Class IC cytochrome C signature 86 97 1.7E-7 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RPIC12D_RS10700 9d3ca2cf0543c793fa8a6ddf8abce540 202 PANTHER PTHR35008 80 181 3.7E-18 T 22-04-2016 RPIC12D_RS10700 9d3ca2cf0543c793fa8a6ddf8abce540 202 PANTHER PTHR35008:SF3 80 181 3.7E-18 T 22-04-2016 RPIC12D_RS10700 9d3ca2cf0543c793fa8a6ddf8abce540 202 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 77 161 1.5E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS13825 e18fb884fd732826e72be0cd2f0a2931 147 Pfam PF07007 Protein of unknown function (DUF1311) 29 130 9.6E-10 T 22-04-2016 IPR009739 Protein of unknown function DUF1311 RPIC12D_RS12020 ddc2773556a3bfb261a1b2d4a1c443b6 142 PANTHER PTHR30558:SF5 1 136 2.3E-25 T 22-04-2016 RPIC12D_RS12020 ddc2773556a3bfb261a1b2d4a1c443b6 142 PANTHER PTHR30558 1 136 2.3E-25 T 22-04-2016 RPIC12D_RS12020 ddc2773556a3bfb261a1b2d4a1c443b6 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 138 6.1E-26 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS04375 e7bed0b044d8d7fc08f5d6d3c8a6586b 262 PANTHER PTHR32125 1 229 2.8E-107 T 22-04-2016 RPIC12D_RS04375 e7bed0b044d8d7fc08f5d6d3c8a6586b 262 Gene3D G3DSA:3.40.1280.10 1 161 1.2E-62 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIC12D_RS04375 e7bed0b044d8d7fc08f5d6d3c8a6586b 262 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 222 3.2E-61 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RPIC12D_RS04375 e7bed0b044d8d7fc08f5d6d3c8a6586b 262 PIRSF PIRSF000386 1 253 8.4E-96 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RPIC12D_RS04375 e7bed0b044d8d7fc08f5d6d3c8a6586b 262 SUPERFAMILY SSF75217 1 229 2.75E-96 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RPIC12D_RS04375 e7bed0b044d8d7fc08f5d6d3c8a6586b 262 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 228 1.4E-91 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RPIC12D_RS04375 e7bed0b044d8d7fc08f5d6d3c8a6586b 262 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 262 108.234 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RPIC12D_RS04375 e7bed0b044d8d7fc08f5d6d3c8a6586b 262 PANTHER PTHR32125:SF1 1 229 2.8E-107 T 22-04-2016 RPIC12D_RS04375 e7bed0b044d8d7fc08f5d6d3c8a6586b 262 Gene3D G3DSA:1.10.1270.20 162 244 3.1E-32 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RPIC12D_RS08685 6fc0669c22b7f64c1c9b06dca258c27c 155 Pfam PF13664 Domain of unknown function (DUF4149) 8 107 2.3E-22 T 22-04-2016 IPR025423 Domain of unknown function DUF4149 RPIC12D_RS11630 407316f58f0eb5c7c4388a7fc3e520d6 401 PANTHER PTHR30483:SF20 29 390 2.2E-89 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC12D_RS11630 407316f58f0eb5c7c4388a7fc3e520d6 401 Pfam PF13458 Periplasmic binding protein 51 391 4.9E-63 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC12D_RS11630 407316f58f0eb5c7c4388a7fc3e520d6 401 SUPERFAMILY SSF53822 51 394 9.97E-99 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS11630 407316f58f0eb5c7c4388a7fc3e520d6 401 Gene3D G3DSA:3.40.50.2300 51 251 4.2E-68 T 22-04-2016 RPIC12D_RS11630 407316f58f0eb5c7c4388a7fc3e520d6 401 PANTHER PTHR30483 29 390 2.2E-89 T 22-04-2016 RPIC12D_RS08430 d147624697455c5ac6223cf894ec9b2a 415 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 44 252 2.6E-57 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU RPIC12D_RS08430 d147624697455c5ac6223cf894ec9b2a 415 PANTHER PTHR30329 104 182 4.0E-67 T 22-04-2016 RPIC12D_RS08430 d147624697455c5ac6223cf894ec9b2a 415 PANTHER PTHR30329 225 413 4.0E-67 T 22-04-2016 RPIC12D_RS08430 d147624697455c5ac6223cf894ec9b2a 415 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 277 413 5.0E-50 T 22-04-2016 IPR017733 Type VI secretion system peptidoglycan-associated domain RPIC12D_RS08430 d147624697455c5ac6223cf894ec9b2a 415 Pfam PF09850 Type VI secretion system protein DotU 46 247 2.1E-55 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU RPIC12D_RS08430 d147624697455c5ac6223cf894ec9b2a 415 SUPERFAMILY SSF103088 286 411 3.14E-29 T 22-04-2016 IPR006665 OmpA-like domain RPIC12D_RS08430 d147624697455c5ac6223cf894ec9b2a 415 Pfam PF00691 OmpA family 309 407 2.7E-18 T 22-04-2016 IPR006665 OmpA-like domain RPIC12D_RS08430 d147624697455c5ac6223cf894ec9b2a 415 Gene3D G3DSA:3.30.1330.60 286 413 4.0E-31 T 22-04-2016 IPR006665 OmpA-like domain RPIC12D_RS08430 d147624697455c5ac6223cf894ec9b2a 415 PANTHER PTHR30329:SF7 104 182 4.0E-67 T 22-04-2016 RPIC12D_RS08430 d147624697455c5ac6223cf894ec9b2a 415 PANTHER PTHR30329:SF7 225 413 4.0E-67 T 22-04-2016 RPIC12D_RS10660 55164b4aef79ca1b2be567cb76fe01cb 131 PANTHER PTHR10374:SF8 3 126 4.1E-31 T 22-04-2016 RPIC12D_RS10660 55164b4aef79ca1b2be567cb76fe01cb 131 PANTHER PTHR10374 3 126 4.1E-31 T 22-04-2016 RPIC12D_RS10660 55164b4aef79ca1b2be567cb76fe01cb 131 Gene3D G3DSA:3.10.180.10 3 126 3.2E-30 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS10660 55164b4aef79ca1b2be567cb76fe01cb 131 SUPERFAMILY SSF54593 3 126 5.5E-30 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS10660 55164b4aef79ca1b2be567cb76fe01cb 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 123 1.0E-14 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC12D_RS08370 51b57cc86c835b3feefb45633150dfbb 105 Pfam PF06127 Protein of unknown function (DUF962) 10 102 3.2E-36 T 22-04-2016 IPR009305 Protein of unknown function DUF962 RPIC12D_RS08370 51b57cc86c835b3feefb45633150dfbb 105 PANTHER PTHR34205:SF1 3 103 2.8E-46 T 22-04-2016 RPIC12D_RS08370 51b57cc86c835b3feefb45633150dfbb 105 PANTHER PTHR34205 3 103 2.8E-46 T 22-04-2016 RPIC12D_RS16315 5e7efd1fc6ca4946d1d1bc4a86422d66 106 Gene3D G3DSA:1.10.10.10 2 100 5.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16315 5e7efd1fc6ca4946d1d1bc4a86422d66 106 PANTHER PTHR33154:SF5 1 101 4.7E-28 T 22-04-2016 RPIC12D_RS16315 5e7efd1fc6ca4946d1d1bc4a86422d66 106 PANTHER PTHR33154 1 101 4.7E-28 T 22-04-2016 RPIC12D_RS16315 5e7efd1fc6ca4946d1d1bc4a86422d66 106 SUPERFAMILY SSF46785 3 94 8.59E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16315 5e7efd1fc6ca4946d1d1bc4a86422d66 106 SMART SM00418 8 88 4.6E-15 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC12D_RS16315 5e7efd1fc6ca4946d1d1bc4a86422d66 106 Pfam PF12840 Helix-turn-helix domain 10 69 5.1E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16315 5e7efd1fc6ca4946d1d1bc4a86422d66 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 9.2E-5 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC12D_RS16315 5e7efd1fc6ca4946d1d1bc4a86422d66 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 9.2E-5 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC12D_RS16315 5e7efd1fc6ca4946d1d1bc4a86422d66 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 9.2E-5 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC12D_RS20710 e541d5294fb41bb978f487af75b673c1 334 SUPERFAMILY SSF53300 160 236 5.08E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A RPIC12D_RS20710 e541d5294fb41bb978f487af75b673c1 334 SUPERFAMILY SSF53300 264 333 5.08E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A RPIC12D_RS04620 ef44e0a25859b0865782f74e8286c077 291 SUPERFAMILY SSF53335 46 269 1.53E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS04620 ef44e0a25859b0865782f74e8286c077 291 Gene3D G3DSA:3.40.50.150 47 277 3.1E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS14355 81b2612659db978685740c7f2d71552b 361 Pfam PF00005 ABC transporter 19 167 1.4E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS14355 81b2612659db978685740c7f2d71552b 361 PANTHER PTHR24220:SF524 5 260 4.0E-123 T 22-04-2016 RPIC12D_RS14355 81b2612659db978685740c7f2d71552b 361 Gene3D G3DSA:3.40.50.300 4 241 8.5E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS14355 81b2612659db978685740c7f2d71552b 361 PANTHER PTHR24220 5 260 4.0E-123 T 22-04-2016 RPIC12D_RS14355 81b2612659db978685740c7f2d71552b 361 SMART SM00382 28 217 4.4E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS14355 81b2612659db978685740c7f2d71552b 361 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS14355 81b2612659db978685740c7f2d71552b 361 SUPERFAMILY SSF52540 4 247 4.67E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12585 c7bd114bd25893549fdefc4d2a4555a2 405 PANTHER PTHR10046 178 313 1.3E-15 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 RPIC12D_RS12585 c7bd114bd25893549fdefc4d2a4555a2 405 PANTHER PTHR10046:SF47 178 313 1.3E-15 T 22-04-2016 RPIC12D_RS12585 c7bd114bd25893549fdefc4d2a4555a2 405 SMART SM00382 170 315 2.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS12585 c7bd114bd25893549fdefc4d2a4555a2 405 SUPERFAMILY SSF52540 170 380 1.1E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12585 c7bd114bd25893549fdefc4d2a4555a2 405 Gene3D G3DSA:3.40.50.300 155 352 8.2E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12585 c7bd114bd25893549fdefc4d2a4555a2 405 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 174 310 6.2E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC12D_RS05830 666b8cc3f544b732931d2d17c70365ee 304 PANTHER PTHR10264:SF80 1 289 1.3E-78 T 22-04-2016 RPIC12D_RS05830 666b8cc3f544b732931d2d17c70365ee 304 PIRSF PIRSF005651 1 294 3.4E-89 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 RPIC12D_RS05830 666b8cc3f544b732931d2d17c70365ee 304 PANTHER PTHR10264 1 289 1.3E-78 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC12D_RS05830 666b8cc3f544b732931d2d17c70365ee 304 SUPERFAMILY SSF117892 54 191 4.32E-26 T 22-04-2016 IPR001107 Band 7 domain RPIC12D_RS05830 666b8cc3f544b732931d2d17c70365ee 304 Pfam PF01145 SPFH domain / Band 7 family 24 199 1.8E-28 T 22-04-2016 IPR001107 Band 7 domain RPIC12D_RS05830 666b8cc3f544b732931d2d17c70365ee 304 TIGRFAM TIGR01932 hflC: HflC protein 144 284 1.6E-46 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 RPIC12D_RS05830 666b8cc3f544b732931d2d17c70365ee 304 SMART SM00244 20 185 1.3E-22 T 22-04-2016 IPR001107 Band 7 domain RPIC12D_RS13120 f0c80b189bc8674a592d4dd2cd8283b9 155 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 111 128 - T 22-04-2016 IPR001882 Biotin-binding site RPIC12D_RS13120 f0c80b189bc8674a592d4dd2cd8283b9 155 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 6.6E-58 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RPIC12D_RS13120 f0c80b189bc8674a592d4dd2cd8283b9 155 Gene3D G3DSA:2.40.50.100 80 154 4.8E-33 T 22-04-2016 RPIC12D_RS13120 f0c80b189bc8674a592d4dd2cd8283b9 155 PANTHER PTHR23151 1 154 2.7E-45 T 22-04-2016 RPIC12D_RS13120 f0c80b189bc8674a592d4dd2cd8283b9 155 SUPERFAMILY SSF51230 80 154 6.41E-26 T 22-04-2016 IPR011053 Single hybrid motif RPIC12D_RS13120 f0c80b189bc8674a592d4dd2cd8283b9 155 Pfam PF00364 Biotin-requiring enzyme 82 154 1.9E-26 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RPIC12D_RS13120 f0c80b189bc8674a592d4dd2cd8283b9 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 84 97 4.6E-21 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RPIC12D_RS13120 f0c80b189bc8674a592d4dd2cd8283b9 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 101 115 4.6E-21 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RPIC12D_RS13120 f0c80b189bc8674a592d4dd2cd8283b9 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 116 129 4.6E-21 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RPIC12D_RS10025 d7cf2f74e11c3877ec23dd155b1cb218 241 Gene3D G3DSA:3.30.1270.10 82 134 3.1E-36 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 RPIC12D_RS10025 d7cf2f74e11c3877ec23dd155b1cb218 241 Gene3D G3DSA:3.30.1270.10 212 239 3.1E-36 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 RPIC12D_RS10025 d7cf2f74e11c3877ec23dd155b1cb218 241 Pfam PF01709 Transcriptional regulator 5 237 2.8E-93 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like RPIC12D_RS10025 d7cf2f74e11c3877ec23dd155b1cb218 241 Gene3D G3DSA:1.10.10.200 1 79 3.5E-36 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like RPIC12D_RS10025 d7cf2f74e11c3877ec23dd155b1cb218 241 PANTHER PTHR12532 1 241 2.6E-111 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like RPIC12D_RS10025 d7cf2f74e11c3877ec23dd155b1cb218 241 SUPERFAMILY SSF75625 3 239 3.27E-95 T 22-04-2016 IPR029072 YebC-like RPIC12D_RS10025 d7cf2f74e11c3877ec23dd155b1cb218 241 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 9.1E-93 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like RPIC12D_RS10025 d7cf2f74e11c3877ec23dd155b1cb218 241 Gene3D G3DSA:3.30.70.980 135 205 4.0E-27 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 RPIC12D_RS10025 d7cf2f74e11c3877ec23dd155b1cb218 241 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.22 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like RPIC12D_RS02265 ca7cd9bb8914c684209dc84052349185 103 Pfam PF13937 Domain of unknown function (DUF4212) 12 79 2.1E-17 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted RPIC12D_RS02265 ca7cd9bb8914c684209dc84052349185 103 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 12 83 1.1E-22 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted RPIC12D_RS04515 c51dcc7ba7c87f44680261487044f499 176 PANTHER PTHR33567 7 176 1.2E-26 T 22-04-2016 RPIC12D_RS04515 c51dcc7ba7c87f44680261487044f499 176 Pfam PF02417 Chromate transporter 9 171 1.6E-30 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 RPIC12D_RS03100 86662b2c84effc0017c5627a58dde729 152 Gene3D G3DSA:2.60.40.790 3 151 9.2E-45 T 22-04-2016 IPR008978 HSP20-like chaperone RPIC12D_RS03100 86662b2c84effc0017c5627a58dde729 152 SUPERFAMILY SSF49764 35 151 2.79E-39 T 22-04-2016 IPR008978 HSP20-like chaperone RPIC12D_RS03100 86662b2c84effc0017c5627a58dde729 152 PANTHER PTHR11527 7 151 3.3E-38 T 22-04-2016 IPR031107 Small heat shock protein HSP20 RPIC12D_RS03100 86662b2c84effc0017c5627a58dde729 152 Pfam PF00011 Hsp20/alpha crystallin family 50 150 5.1E-26 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain RPIC12D_RS07470 58331089549c43154da53209b5a10fff 511 PIRSF PIRSF006060 1 479 1.7E-76 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC12D_RS07470 58331089549c43154da53209b5a10fff 511 ProSitePatterns PS00218 Amino acid permeases signature. 47 78 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RPIC12D_RS07470 58331089549c43154da53209b5a10fff 511 Pfam PF00324 Amino acid permease 22 470 6.2E-131 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RPIC12D_RS07470 58331089549c43154da53209b5a10fff 511 PANTHER PTHR11785:SF204 9 486 1.0E-206 T 22-04-2016 RPIC12D_RS07470 58331089549c43154da53209b5a10fff 511 PANTHER PTHR11785 9 486 1.0E-206 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC12D_RS10525 00071214299d2f47380d5dd8bf56e81d 293 Gene3D G3DSA:3.40.190.10 249 287 3.8E-13 T 22-04-2016 RPIC12D_RS10525 00071214299d2f47380d5dd8bf56e81d 293 Gene3D G3DSA:3.40.190.10 42 141 3.8E-13 T 22-04-2016 RPIC12D_RS10525 00071214299d2f47380d5dd8bf56e81d 293 SUPERFAMILY SSF53850 38 286 2.3E-28 T 22-04-2016 RPIC12D_RS10525 00071214299d2f47380d5dd8bf56e81d 293 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 133 287 6.2E-17 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS10525 00071214299d2f47380d5dd8bf56e81d 293 Gene3D G3DSA:3.40.190.10 142 240 2.4E-10 T 22-04-2016 RPIC12D_RS10525 00071214299d2f47380d5dd8bf56e81d 293 SMART SM00062 45 290 2.2E-13 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC12D_RS04070 c3c8c751395b2ed9a6946309f66a2d7e 349 Gene3D G3DSA:3.40.50.1580 80 239 1.5E-5 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RPIC12D_RS04070 c3c8c751395b2ed9a6946309f66a2d7e 349 PIRSF PIRSF013171 2 349 2.3E-159 T 22-04-2016 IPR009486 Purine nucleoside permease GO:0055085 RPIC12D_RS04070 c3c8c751395b2ed9a6946309f66a2d7e 349 Pfam PF06516 Purine nucleoside permease (NUP) 37 347 5.3E-124 T 22-04-2016 IPR009486 Purine nucleoside permease GO:0055085 RPIC12D_RS04070 c3c8c751395b2ed9a6946309f66a2d7e 349 PANTHER PTHR38643 38 342 2.1E-89 T 22-04-2016 RPIC12D_RS06155 af5e1c09cc7dacb4d60deb3a73edd76d 127 Pfam PF04984 Phage tail sheath protein 1 82 1.3E-7 T 22-04-2016 IPR007067 Tail sheath protein RPIC12D_RS10190 08de3154f765964965cf03835f516d61 274 SUPERFAMILY SSF56925 201 274 1.67E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC12D_RS10190 08de3154f765964965cf03835f516d61 274 SUPERFAMILY SSF56925 131 174 1.67E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC12D_RS10190 08de3154f765964965cf03835f516d61 274 SUPERFAMILY SSF56925 57 103 1.67E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC12D_RS10190 08de3154f765964965cf03835f516d61 274 Pfam PF03922 OmpW family 64 274 3.6E-20 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 RPIC12D_RS10190 08de3154f765964965cf03835f516d61 274 PANTHER PTHR36920 1 49 2.2E-21 T 22-04-2016 RPIC12D_RS10190 08de3154f765964965cf03835f516d61 274 PANTHER PTHR36920 65 178 2.2E-21 T 22-04-2016 RPIC12D_RS10190 08de3154f765964965cf03835f516d61 274 PANTHER PTHR36920 197 274 2.2E-21 T 22-04-2016 RPIC12D_RS10190 08de3154f765964965cf03835f516d61 274 PANTHER PTHR36920:SF1 1 49 2.2E-21 T 22-04-2016 RPIC12D_RS10190 08de3154f765964965cf03835f516d61 274 PANTHER PTHR36920:SF1 65 178 2.2E-21 T 22-04-2016 RPIC12D_RS10190 08de3154f765964965cf03835f516d61 274 PANTHER PTHR36920:SF1 197 274 2.2E-21 T 22-04-2016 RPIC12D_RS10190 08de3154f765964965cf03835f516d61 274 Gene3D G3DSA:2.40.160.20 20 274 7.9E-60 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC12D_RS02995 5d7ffcdd15847c48fa46911ded2ea524 438 SUPERFAMILY SSF53756 60 433 1.88E-13 T 22-04-2016 RPIC12D_RS02995 5d7ffcdd15847c48fa46911ded2ea524 438 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 214 9.0E-62 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 RPIC12D_RS02995 5d7ffcdd15847c48fa46911ded2ea524 438 Pfam PF00534 Glycosyl transferases group 1 344 412 1.9E-6 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RPIC12D_RS02995 5d7ffcdd15847c48fa46911ded2ea524 438 PANTHER PTHR23417:SF2 195 436 6.1E-87 T 22-04-2016 RPIC12D_RS02995 5d7ffcdd15847c48fa46911ded2ea524 438 PANTHER PTHR23417:SF2 1 116 6.1E-87 T 22-04-2016 RPIC12D_RS02995 5d7ffcdd15847c48fa46911ded2ea524 438 PANTHER PTHR23417:SF2 135 145 6.1E-87 T 22-04-2016 RPIC12D_RS02995 5d7ffcdd15847c48fa46911ded2ea524 438 PANTHER PTHR23417 195 436 6.1E-87 T 22-04-2016 RPIC12D_RS02995 5d7ffcdd15847c48fa46911ded2ea524 438 PANTHER PTHR23417 1 116 6.1E-87 T 22-04-2016 RPIC12D_RS02995 5d7ffcdd15847c48fa46911ded2ea524 438 PANTHER PTHR23417 135 145 6.1E-87 T 22-04-2016 RPIC12D_RS11760 262eaab45a44b3edf05bf1828f179004 206 Pfam PF13548 Domain of unknown function (DUF4126) 6 176 5.2E-59 T 22-04-2016 IPR025196 Domain of unknown function DUF4126 RPIC12D_RS15370 a2ea62dd7f7b78dcf0d8af8d075e02c1 270 Gene3D G3DSA:1.10.620.20 50 188 1.1E-14 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RPIC12D_RS15370 a2ea62dd7f7b78dcf0d8af8d075e02c1 270 Pfam PF03405 Fatty acid desaturase 56 169 1.3E-5 T 22-04-2016 IPR005067 Fatty acid desaturase, type 2 GO:0006631|GO:0045300|GO:0055114 UniPathway: UPA00199 RPIC12D_RS15370 a2ea62dd7f7b78dcf0d8af8d075e02c1 270 SUPERFAMILY SSF47240 2 246 1.14E-42 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC12D_RS03450 a6382a562420ddd4a2238f122e33e173 154 Pfam PF11663 Toxin with endonuclease activity, of toxin-antitoxin system 8 144 1.2E-57 T 22-04-2016 IPR021679 Toxin endonuclease, YhaV RPIC12D_RS11035 4dd3170e678456f2844d1b386c771058 293 PANTHER PTHR33969 40 288 1.9E-73 T 22-04-2016 RPIC12D_RS11035 4dd3170e678456f2844d1b386c771058 293 Hamap MF_01805 Segregation and condensation protein A [scpA]. 56 290 21.016 T 22-04-2016 IPR003768 Segregation and condensation protein A RPIC12D_RS11035 4dd3170e678456f2844d1b386c771058 293 Pfam PF02616 Segregation and condensation protein ScpA 73 288 3.5E-33 T 22-04-2016 IPR003768 Segregation and condensation protein A RPIC12D_RS11035 4dd3170e678456f2844d1b386c771058 293 PANTHER PTHR33969:SF2 40 288 1.9E-73 T 22-04-2016 RPIC12D_RS06270 cd451d91b70e344e9a345149290d592a 208 Gene3D G3DSA:1.20.58.220 113 199 5.7E-4 T 22-04-2016 RPIC12D_RS06270 cd451d91b70e344e9a345149290d592a 208 PANTHER PTHR37298 1 208 4.0E-53 T 22-04-2016 RPIC12D_RS06270 cd451d91b70e344e9a345149290d592a 208 Pfam PF01865 Protein of unknown function DUF47 8 206 1.0E-33 T 22-04-2016 IPR018445 Putative phosphate transport regulator RPIC12D_RS02000 d89e4d84f3dc7b39144ec6ac87ad0fe0 230 Gene3D G3DSA:3.90.550.10 1 229 4.0E-46 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS02000 d89e4d84f3dc7b39144ec6ac87ad0fe0 230 Pfam PF00483 Nucleotidyl transferase 1 128 9.0E-20 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RPIC12D_RS02000 d89e4d84f3dc7b39144ec6ac87ad0fe0 230 PANTHER PTHR22572 1 230 5.3E-35 T 22-04-2016 RPIC12D_RS02000 d89e4d84f3dc7b39144ec6ac87ad0fe0 230 SUPERFAMILY SSF53448 1 227 4.73E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS08155 d1a5da2696b8e0ae203ee079e465adcc 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 4.2E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC12D_RS08155 d1a5da2696b8e0ae203ee079e465adcc 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 4.2E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC12D_RS08155 d1a5da2696b8e0ae203ee079e465adcc 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 4.2E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC12D_RS08155 d1a5da2696b8e0ae203ee079e465adcc 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 4.2E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC12D_RS08155 d1a5da2696b8e0ae203ee079e465adcc 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 4.2E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC12D_RS08155 d1a5da2696b8e0ae203ee079e465adcc 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 4.2E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC12D_RS08155 d1a5da2696b8e0ae203ee079e465adcc 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 4.2E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC12D_RS08155 d1a5da2696b8e0ae203ee079e465adcc 289 SUPERFAMILY SSF51735 122 280 7.94E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS08155 d1a5da2696b8e0ae203ee079e465adcc 289 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 1.1E-41 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC12D_RS08155 d1a5da2696b8e0ae203ee079e465adcc 289 Gene3D G3DSA:3.40.50.720 139 263 1.2E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS08155 d1a5da2696b8e0ae203ee079e465adcc 289 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 38.889 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC12D_RS08155 d1a5da2696b8e0ae203ee079e465adcc 289 SUPERFAMILY SSF53223 1 121 5.66E-41 T 22-04-2016 RPIC12D_RS08155 d1a5da2696b8e0ae203ee079e465adcc 289 PANTHER PTHR10025 1 283 4.2E-165 T 22-04-2016 RPIC12D_RS08155 d1a5da2696b8e0ae203ee079e465adcc 289 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC12D_RS08155 d1a5da2696b8e0ae203ee079e465adcc 289 Gene3D G3DSA:3.40.192.10 7 138 6.8E-51 T 22-04-2016 RPIC12D_RS08155 d1a5da2696b8e0ae203ee079e465adcc 289 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC12D_RS08155 d1a5da2696b8e0ae203ee079e465adcc 289 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 281 1.6E-69 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC12D_RS16955 38ae798bf1ff4688c94ac5d7a34b3a85 139 SUPERFAMILY SSF109635 5 98 1.19E-29 T 22-04-2016 RPIC12D_RS16955 38ae798bf1ff4688c94ac5d7a34b3a85 139 SUPERFAMILY SSF57716 99 137 1.03E-7 T 22-04-2016 RPIC12D_RS16955 38ae798bf1ff4688c94ac5d7a34b3a85 139 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 97 132 1.1E-10 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 RPIC12D_RS16955 38ae798bf1ff4688c94ac5d7a34b3a85 139 PANTHER PTHR33823 17 135 3.4E-36 T 22-04-2016 RPIC12D_RS16955 38ae798bf1ff4688c94ac5d7a34b3a85 139 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 102 126 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RPIC12D_RS16955 38ae798bf1ff4688c94ac5d7a34b3a85 139 PANTHER PTHR33823:SF2 17 135 3.4E-36 T 22-04-2016 RPIC12D_RS16955 38ae798bf1ff4688c94ac5d7a34b3a85 139 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 17 138 27.851 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 RPIC12D_RS16955 38ae798bf1ff4688c94ac5d7a34b3a85 139 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 21 129 6.4E-43 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 RPIC12D_RS10220 2e4489a29adeb85a21287543529708b5 149 Gene3D G3DSA:1.10.1510.10 2 90 1.7E-34 T 22-04-2016 RPIC12D_RS10220 2e4489a29adeb85a21287543529708b5 149 SUPERFAMILY SSF89095 2 146 3.4E-44 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 RPIC12D_RS10220 2e4489a29adeb85a21287543529708b5 149 PANTHER PTHR28055 2 149 1.3E-55 T 22-04-2016 RPIC12D_RS10220 2e4489a29adeb85a21287543529708b5 149 Gene3D G3DSA:1.10.10.410 91 146 4.9E-24 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RPIC12D_RS10220 2e4489a29adeb85a21287543529708b5 149 PANTHER PTHR28055:SF1 2 149 1.3E-55 T 22-04-2016 RPIC12D_RS10220 2e4489a29adeb85a21287543529708b5 149 Pfam PF09424 Yqey-like protein 4 146 2.0E-57 T 22-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial RPIC12D_RS22350 34c60d8807977d359958e1a4bbbf7a2e 94 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 10 92 2.5E-24 T 22-04-2016 IPR007296 Domain of unknown function DUF403 RPIC12D_RS22350 34c60d8807977d359958e1a4bbbf7a2e 94 PANTHER PTHR34595 2 91 9.7E-26 T 22-04-2016 RPIC12D_RS02155 649313ea5786b52eadc8fe1947cc86dd 470 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 363 391 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC12D_RS02155 649313ea5786b52eadc8fe1947cc86dd 470 PANTHER PTHR24322:SF438 236 360 1.9E-45 T 22-04-2016 RPIC12D_RS02155 649313ea5786b52eadc8fe1947cc86dd 470 PANTHER PTHR24322:SF438 376 407 1.9E-45 T 22-04-2016 RPIC12D_RS02155 649313ea5786b52eadc8fe1947cc86dd 470 Gene3D G3DSA:3.40.50.720 226 466 3.9E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02155 649313ea5786b52eadc8fe1947cc86dd 470 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 232 407 1.3E-5 T 22-04-2016 RPIC12D_RS02155 649313ea5786b52eadc8fe1947cc86dd 470 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 356 364 5.3E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS02155 649313ea5786b52eadc8fe1947cc86dd 470 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 376 395 5.3E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS02155 649313ea5786b52eadc8fe1947cc86dd 470 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 303 314 5.3E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS02155 649313ea5786b52eadc8fe1947cc86dd 470 PANTHER PTHR24322 236 360 1.9E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS02155 649313ea5786b52eadc8fe1947cc86dd 470 PANTHER PTHR24322 376 407 1.9E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS02155 649313ea5786b52eadc8fe1947cc86dd 470 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 238 463 1.2E-45 T 22-04-2016 RPIC12D_RS02155 649313ea5786b52eadc8fe1947cc86dd 470 SUPERFAMILY SSF51735 228 464 3.95E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS02155 649313ea5786b52eadc8fe1947cc86dd 470 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 303 314 1.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS02155 649313ea5786b52eadc8fe1947cc86dd 470 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 350 366 1.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS02155 649313ea5786b52eadc8fe1947cc86dd 470 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 397 414 1.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS02155 649313ea5786b52eadc8fe1947cc86dd 470 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 430 450 1.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS02155 649313ea5786b52eadc8fe1947cc86dd 470 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 233 250 1.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS02155 649313ea5786b52eadc8fe1947cc86dd 470 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 376 395 1.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS12680 20879fef879c7245dd876404ba61c23b 505 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 24 493 6.7E-124 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RPIC12D_RS12680 20879fef879c7245dd876404ba61c23b 505 Pfam PF02321 Outer membrane efflux protein 91 282 9.8E-18 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC12D_RS12680 20879fef879c7245dd876404ba61c23b 505 Pfam PF02321 Outer membrane efflux protein 313 491 4.3E-23 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC12D_RS12680 20879fef879c7245dd876404ba61c23b 505 SUPERFAMILY SSF56954 15 44 1.14E-93 T 22-04-2016 RPIC12D_RS12680 20879fef879c7245dd876404ba61c23b 505 SUPERFAMILY SSF56954 81 496 1.14E-93 T 22-04-2016 RPIC12D_RS12680 20879fef879c7245dd876404ba61c23b 505 Gene3D G3DSA:1.20.1600.10 79 496 2.0E-89 T 22-04-2016 RPIC12D_RS12680 20879fef879c7245dd876404ba61c23b 505 PANTHER PTHR30203:SF9 13 503 3.6E-90 T 22-04-2016 RPIC12D_RS12680 20879fef879c7245dd876404ba61c23b 505 PANTHER PTHR30203 13 503 3.6E-90 T 22-04-2016 RPIC12D_RS13025 50db31e154f2ce6c67516f713e3dbdea 207 Pfam PF01337 Barstar (barnase inhibitor) 112 196 1.1E-25 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) RPIC12D_RS13025 50db31e154f2ce6c67516f713e3dbdea 207 SUPERFAMILY SSF52038 108 200 8.5E-23 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) RPIC12D_RS13025 50db31e154f2ce6c67516f713e3dbdea 207 Gene3D G3DSA:3.30.370.10 107 200 6.2E-30 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) RPIC12D_RS10815 f26df3457c944cd98a8c387a58517536 781 PANTHER PTHR22683:SF41 214 774 1.6E-259 T 22-04-2016 RPIC12D_RS10815 f26df3457c944cd98a8c387a58517536 781 SUPERFAMILY SSF52540 362 668 2.79E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10815 f26df3457c944cd98a8c387a58517536 781 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 23 202 8.8E-49 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region RPIC12D_RS10815 f26df3457c944cd98a8c387a58517536 781 SUPERFAMILY SSF46785 708 773 3.02E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS10815 f26df3457c944cd98a8c387a58517536 781 Gene3D G3DSA:3.40.50.300 361 664 6.4E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS10815 f26df3457c944cd98a8c387a58517536 781 Pfam PF01580 FtsK/SpoIIIE family 388 597 3.2E-62 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RPIC12D_RS10815 f26df3457c944cd98a8c387a58517536 781 SMART SM00843 708 773 1.5E-37 T 22-04-2016 IPR018541 FtsK gamma domain RPIC12D_RS10815 f26df3457c944cd98a8c387a58517536 781 Pfam PF09397 Ftsk gamma domain 710 770 4.4E-26 T 22-04-2016 IPR018541 FtsK gamma domain RPIC12D_RS10815 f26df3457c944cd98a8c387a58517536 781 PANTHER PTHR22683 214 774 1.6E-259 T 22-04-2016 RPIC12D_RS09440 ea9acc15655a5f191e54ac769cb3bdc8 153 PIRSF PIRSF032131 1 150 9.7E-56 T 22-04-2016 IPR009562 Protein of unknown function DUF1178 RPIC12D_RS09440 ea9acc15655a5f191e54ac769cb3bdc8 153 Pfam PF06676 Protein of unknown function (DUF1178) 1 145 1.1E-53 T 22-04-2016 IPR009562 Protein of unknown function DUF1178 RPIC12D_RS24760 8a997771054b87635c10340add87d67b 94 PANTHER PTHR33217 1 62 1.7E-23 T 22-04-2016 RPIC12D_RS24760 8a997771054b87635c10340add87d67b 94 Pfam PF00872 Transposase, Mutator family 1 61 1.0E-20 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS00050 8e892de43f58589984105ac02fd1140a 319 PANTHER PTHR33420 53 319 2.0E-34 T 22-04-2016 RPIC12D_RS00050 8e892de43f58589984105ac02fd1140a 319 PANTHER PTHR33420:SF10 53 319 2.0E-34 T 22-04-2016 RPIC12D_RS00050 8e892de43f58589984105ac02fd1140a 319 Gene3D G3DSA:2.60.40.1090 182 319 2.4E-21 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RPIC12D_RS00050 8e892de43f58589984105ac02fd1140a 319 Pfam PF00419 Fimbrial protein 178 319 9.9E-12 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RPIC12D_RS00050 8e892de43f58589984105ac02fd1140a 319 SUPERFAMILY SSF49401 183 319 1.49E-22 T 22-04-2016 IPR008966 Adhesion domain RPIC12D_RS14810 aaf91c47d792e273c196b3f3e4e1e7f2 280 PIRSF PIRSF012281 1 279 2.1E-119 T 22-04-2016 IPR012039 Uncharacterised conserved protein UCP012281 RPIC12D_RS14810 aaf91c47d792e273c196b3f3e4e1e7f2 280 Pfam PF09906 Uncharacterized protein conserved in bacteria (DUF2135) 219 265 2.2E-18 T 22-04-2016 IPR019220 Domain of unknown function DUF2135 RPIC12D_RS01830 0a84168c49090e47257af7a8cec6e585 145 PANTHER PTHR11049:SF5 26 145 1.3E-42 T 22-04-2016 RPIC12D_RS01830 0a84168c49090e47257af7a8cec6e585 145 PANTHER PTHR11049 26 145 1.3E-42 T 22-04-2016 RPIC12D_RS01830 0a84168c49090e47257af7a8cec6e585 145 SUPERFAMILY SSF54637 24 144 6.56E-36 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS01830 0a84168c49090e47257af7a8cec6e585 145 Gene3D G3DSA:3.10.129.10 16 145 6.4E-38 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS01830 0a84168c49090e47257af7a8cec6e585 145 Pfam PF03061 Thioesterase superfamily 39 110 1.0E-14 T 22-04-2016 IPR006683 Thioesterase domain RPIC12D_RS03520 5d045a252711d3f9930ca850b23f3617 166 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 148 1.4E-48 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC12D_RS03520 5d045a252711d3f9930ca850b23f3617 166 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 10 151 27.23 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC12D_RS03520 5d045a252711d3f9930ca850b23f3617 166 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 147 5.5E-39 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC12D_RS03520 5d045a252711d3f9930ca850b23f3617 166 SUPERFAMILY SSF52121 6 151 6.41E-53 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC12D_RS03520 5d045a252711d3f9930ca850b23f3617 166 Gene3D G3DSA:3.40.50.960 6 152 3.5E-55 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC12D_RS03520 5d045a252711d3f9930ca850b23f3617 166 PANTHER PTHR21058 10 157 4.6E-59 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC12D_RS21110 04a3a1770582967c8ce0823cf2118b88 90 Pfam PF10101 Predicted membrane protein (DUF2339) 1 88 8.6E-19 T 22-04-2016 IPR019286 Protein of unknown function DUF2339, transmembrane RPIC12D_RS17525 bd217e381c102867780cb8c722c90486 95 Gene3D G3DSA:3.40.50.2020 1 95 8.1E-35 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS17525 bd217e381c102867780cb8c722c90486 95 Pfam PF00156 Phosphoribosyl transferase domain 10 95 5.0E-9 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIC12D_RS17525 bd217e381c102867780cb8c722c90486 95 PANTHER PTHR19278 1 95 8.3E-43 T 22-04-2016 RPIC12D_RS17525 bd217e381c102867780cb8c722c90486 95 PANTHER PTHR19278:SF36 1 95 8.3E-43 T 22-04-2016 RPIC12D_RS17525 bd217e381c102867780cb8c722c90486 95 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 95 16.004 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC12D_RS17525 bd217e381c102867780cb8c722c90486 95 SUPERFAMILY SSF53271 8 95 1.56E-20 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC12D_RS10600 9e96419c4563241e6819231ddff385c5 258 TIGRFAM TIGR04557 fuse_rel_SoxYZ: quinoprotein dehydrogenase-associated SoxYZ-like carrier 36 252 5.3E-63 T 22-04-2016 IPR030831 Quinoprotein dehydrogenase-associated SoxYZ-like carrier RPIC12D_RS10600 9e96419c4563241e6819231ddff385c5 258 SUPERFAMILY SSF81296 173 256 3.22E-13 T 22-04-2016 IPR014756 Immunoglobulin E-set RPIC12D_RS10600 9e96419c4563241e6819231ddff385c5 258 Pfam PF08770 Sulphur oxidation protein SoxZ 177 256 2.5E-6 T 22-04-2016 IPR014880 Sulphur oxidation protein SoxZ RPIC12D_RS10600 9e96419c4563241e6819231ddff385c5 258 Gene3D G3DSA:2.60.40.10 175 256 1.6E-9 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC12D_RS10600 9e96419c4563241e6819231ddff385c5 258 Pfam PF13501 Sulfur oxidation protein SoxY 41 145 3.9E-26 T 22-04-2016 IPR032711 Ig-like SoxY domain RPIC12D_RS17015 7b2a2bf233f13509d078f325b93fbc54 70 Pfam PF13490 Putative zinc-finger 10 43 9.5E-8 T 22-04-2016 IPR027383 Putative zinc-finger RPIC12D_RS01545 940fbe8a22c7b71edeb4e1d214103fb5 466 Gene3D G3DSA:3.40.30.10 288 429 7.1E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS01545 940fbe8a22c7b71edeb4e1d214103fb5 466 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 7 217 2.2E-12 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 RPIC12D_RS01545 940fbe8a22c7b71edeb4e1d214103fb5 466 Pfam PF00578 AhpC/TSA family 303 407 1.5E-11 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS01545 940fbe8a22c7b71edeb4e1d214103fb5 466 PANTHER PTHR13833:SF51 44 428 1.4E-37 T 22-04-2016 RPIC12D_RS01545 940fbe8a22c7b71edeb4e1d214103fb5 466 SUPERFAMILY SSF52833 283 425 4.03E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS01545 940fbe8a22c7b71edeb4e1d214103fb5 466 PANTHER PTHR13833 44 428 1.4E-37 T 22-04-2016 RPIC12D_RS13325 49bb42ecc797843f20ecf81aa9d60470 688 Pfam PF03235 Protein of unknown function DUF262 2 302 6.3E-40 T 22-04-2016 IPR004919 Domain of unknown function DUF262 RPIC12D_RS13325 49bb42ecc797843f20ecf81aa9d60470 688 Pfam PF07510 Protein of unknown function (DUF1524) 545 664 4.6E-5 T 22-04-2016 IPR011089 Domain of unknown function DUF1524 RPIC12D_RS08565 09014120b0ea7cd19d4275eb033fcca6 152 Gene3D G3DSA:1.10.1660.10 56 120 1.2E-11 T 22-04-2016 RPIC12D_RS08565 09014120b0ea7cd19d4275eb033fcca6 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.0E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS08565 09014120b0ea7cd19d4275eb033fcca6 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 3.0E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS08565 09014120b0ea7cd19d4275eb033fcca6 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.0E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS08565 09014120b0ea7cd19d4275eb033fcca6 152 PANTHER PTHR30204:SF30 1 108 5.2E-34 T 22-04-2016 RPIC12D_RS08565 09014120b0ea7cd19d4275eb033fcca6 152 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS08565 09014120b0ea7cd19d4275eb033fcca6 152 SUPERFAMILY SSF46955 1 113 3.66E-27 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC12D_RS08565 09014120b0ea7cd19d4275eb033fcca6 152 SMART SM00422 1 70 2.4E-25 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS08565 09014120b0ea7cd19d4275eb033fcca6 152 Pfam PF13411 MerR HTH family regulatory protein 1 68 2.1E-17 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC12D_RS08565 09014120b0ea7cd19d4275eb033fcca6 152 PANTHER PTHR30204 1 108 5.2E-34 T 22-04-2016 RPIC12D_RS08565 09014120b0ea7cd19d4275eb033fcca6 152 Gene3D G3DSA:1.10.1660.10 1 55 2.7E-25 T 22-04-2016 RPIC12D_RS05425 5a2c67c0552b3733e787612d9ab4fcd2 188 SUPERFAMILY SSF53335 12 165 9.24E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS05425 5a2c67c0552b3733e787612d9ab4fcd2 188 Gene3D G3DSA:3.40.50.150 11 160 5.5E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS05425 5a2c67c0552b3733e787612d9ab4fcd2 188 Pfam PF13649 Methyltransferase domain 31 106 2.0E-8 T 22-04-2016 RPIC12D_RS15700 0ce336480ded21206e942bef6ef81766 118 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 37 110 2.9E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS15700 0ce336480ded21206e942bef6ef81766 118 SUPERFAMILY SSF46626 21 113 1.46E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS15700 0ce336480ded21206e942bef6ef81766 118 Gene3D G3DSA:1.10.760.10 37 114 8.0E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS07985 6a6eeed1cc4b8205613362fee4d37307 269 SUPERFAMILY SSF64438 6 267 1.17E-75 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic RPIC12D_RS07985 6a6eeed1cc4b8205613362fee4d37307 269 Gene3D G3DSA:3.60.140.10 5 267 3.8E-90 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RPIC12D_RS07985 6a6eeed1cc4b8205613362fee4d37307 269 PANTHER PTHR30616:SF3 7 269 2.4E-103 T 22-04-2016 RPIC12D_RS07985 6a6eeed1cc4b8205613362fee4d37307 269 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 44 267 3.2E-50 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RPIC12D_RS07985 6a6eeed1cc4b8205613362fee4d37307 269 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 23 266 1.6E-69 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RPIC12D_RS07985 6a6eeed1cc4b8205613362fee4d37307 269 PANTHER PTHR30616 7 269 2.4E-103 T 22-04-2016 RPIC12D_RS12410 3a8888a417800e5e906475ae3bea290f 263 PANTHER PTHR24220:SF564 5 211 2.8E-97 T 22-04-2016 RPIC12D_RS12410 3a8888a417800e5e906475ae3bea290f 263 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC12D_RS12410 3a8888a417800e5e906475ae3bea290f 263 PANTHER PTHR24220 5 211 2.8E-97 T 22-04-2016 RPIC12D_RS12410 3a8888a417800e5e906475ae3bea290f 263 Pfam PF00005 ABC transporter 25 163 2.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC12D_RS12410 3a8888a417800e5e906475ae3bea290f 263 SUPERFAMILY SSF52540 18 224 5.03E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12410 3a8888a417800e5e906475ae3bea290f 263 SMART SM00382 33 213 5.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC12D_RS12410 3a8888a417800e5e906475ae3bea290f 263 Gene3D G3DSA:3.40.50.300 4 219 9.6E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03580 f8a30d87f27dfe5fff4dd61432a163ed 1122 SUPERFAMILY SSF53300 371 444 8.26E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A RPIC12D_RS03580 f8a30d87f27dfe5fff4dd61432a163ed 1122 SUPERFAMILY SSF53300 277 343 8.26E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A RPIC12D_RS03580 f8a30d87f27dfe5fff4dd61432a163ed 1122 Pfam PF05567 Neisseria PilC beta-propeller domain 600 923 2.8E-71 T 22-04-2016 IPR008707 PilC beta-propeller domain RPIC12D_RS03580 f8a30d87f27dfe5fff4dd61432a163ed 1122 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1041 1053 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site RPIC12D_RS27060 8b83f97e99995a53e6cc522745d4e849 160 PANTHER PTHR23508 6 158 3.1E-14 T 22-04-2016 RPIC12D_RS27060 8b83f97e99995a53e6cc522745d4e849 160 PANTHER PTHR23508:SF15 6 158 3.1E-14 T 22-04-2016 RPIC12D_RS27060 8b83f97e99995a53e6cc522745d4e849 160 Gene3D G3DSA:1.20.1250.20 90 152 1.9E-9 T 22-04-2016 RPIC12D_RS27060 8b83f97e99995a53e6cc522745d4e849 160 Gene3D G3DSA:1.20.1250.20 5 54 1.2E-5 T 22-04-2016 RPIC12D_RS27060 8b83f97e99995a53e6cc522745d4e849 160 SUPERFAMILY SSF103473 3 157 2.49E-19 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS27060 8b83f97e99995a53e6cc522745d4e849 160 Pfam PF07690 Major Facilitator Superfamily 4 153 2.7E-11 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS13010 cceded5ccdd822f7d86dbf4d3746c99b 334 SUPERFAMILY SSF53822 34 332 1.69E-53 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC12D_RS13010 cceded5ccdd822f7d86dbf4d3746c99b 334 PIRSF PIRSF002816 2 334 9.5E-135 T 22-04-2016 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 RPIC12D_RS13010 cceded5ccdd822f7d86dbf4d3746c99b 334 PANTHER PTHR30036:SF1 2 316 1.2E-32 T 22-04-2016 RPIC12D_RS13010 cceded5ccdd822f7d86dbf4d3746c99b 334 Gene3D G3DSA:3.40.50.2300 157 306 5.6E-40 T 22-04-2016 RPIC12D_RS13010 cceded5ccdd822f7d86dbf4d3746c99b 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 35 319 1.0E-35 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain RPIC12D_RS13010 cceded5ccdd822f7d86dbf4d3746c99b 334 PANTHER PTHR30036 2 316 1.2E-32 T 22-04-2016 RPIC12D_RS13010 cceded5ccdd822f7d86dbf4d3746c99b 334 Gene3D G3DSA:3.40.50.2300 33 156 1.0E-32 T 22-04-2016 RPIC12D_RS16520 dd9953137ac1af2f374688c2cc9de747 201 Gene3D G3DSA:1.10.150.290 77 90 1.9E-30 T 22-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RPIC12D_RS16520 dd9953137ac1af2f374688c2cc9de747 201 Gene3D G3DSA:1.10.150.290 125 181 1.9E-30 T 22-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RPIC12D_RS03420 ff1afa4d1fabc6cd353b9c2d5c2e4156 148 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 35 144 6.9E-43 T 22-04-2016 IPR011090 Integrating conjugative element protein, PFL4709 RPIC12D_RS03420 ff1afa4d1fabc6cd353b9c2d5c2e4156 148 Pfam PF07511 Protein of unknown function (DUF1525) 35 145 1.2E-41 T 22-04-2016 IPR011090 Integrating conjugative element protein, PFL4709 RPIC12D_RS04975 f12932d750c69853dbd47b80467e101b 273 SUPERFAMILY SSF57863 125 256 4.45E-10 T 22-04-2016 RPIC12D_RS04975 f12932d750c69853dbd47b80467e101b 273 SUPERFAMILY SSF50249 40 113 6.85E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04975 f12932d750c69853dbd47b80467e101b 273 Pfam PF11967 Recombination protein O N terminal 42 114 4.2E-23 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal RPIC12D_RS04975 f12932d750c69853dbd47b80467e101b 273 Gene3D G3DSA:2.40.50.140 38 113 6.7E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC12D_RS04975 f12932d750c69853dbd47b80467e101b 273 Pfam PF02565 Recombination protein O C terminal 121 264 3.1E-18 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RPIC12D_RS04975 f12932d750c69853dbd47b80467e101b 273 Hamap MF_00201 DNA repair protein RecO [recO]. 38 270 22.138 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RPIC12D_RS04975 f12932d750c69853dbd47b80467e101b 273 TIGRFAM TIGR00613 reco: DNA repair protein RecO 44 189 7.1E-27 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RPIC12D_RS04975 f12932d750c69853dbd47b80467e101b 273 PANTHER PTHR33991 38 273 5.1E-47 T 22-04-2016 RPIC12D_RS03330 ddc694906ef7e63f5b9bed84a2797690 198 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 64 165 5.5E-38 T 22-04-2016 IPR022260 Integrating conjugative element protein PilL, PFGI-1 RPIC12D_RS09425 eb7ab8db0ead5b411bb77216910c2a06 161 SUPERFAMILY SSF54637 14 159 2.49E-41 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS09425 eb7ab8db0ead5b411bb77216910c2a06 161 Pfam PF01575 MaoC like domain 27 124 1.4E-19 T 22-04-2016 IPR002539 MaoC-like domain RPIC12D_RS09425 eb7ab8db0ead5b411bb77216910c2a06 161 Gene3D G3DSA:3.10.129.10 14 159 6.9E-46 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS09425 eb7ab8db0ead5b411bb77216910c2a06 161 PANTHER PTHR13078 16 159 7.8E-42 T 22-04-2016 RPIC12D_RS07285 f49dfbd2e699b1627ea9ffeeb2f443c7 494 Pfam PF01425 Amidase 39 470 1.9E-88 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC12D_RS07285 f49dfbd2e699b1627ea9ffeeb2f443c7 494 PANTHER PTHR11895:SF76 16 488 8.9E-174 T 22-04-2016 RPIC12D_RS07285 f49dfbd2e699b1627ea9ffeeb2f443c7 494 SUPERFAMILY SSF75304 15 480 6.8E-123 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC12D_RS07285 f49dfbd2e699b1627ea9ffeeb2f443c7 494 PANTHER PTHR11895 16 488 8.9E-174 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC12D_RS07285 f49dfbd2e699b1627ea9ffeeb2f443c7 494 Gene3D G3DSA:3.90.1300.10 17 484 1.5E-115 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC12D_RS26135 9c6b219e29c4fbe8b7c43177b476f639 243 SMART SM00836 177 243 0.0081 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RPIC12D_RS26135 9c6b219e29c4fbe8b7c43177b476f639 243 Gene3D G3DSA:1.10.730.10 181 242 3.8E-17 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS26135 9c6b219e29c4fbe8b7c43177b476f639 243 Pfam PF05746 DALR anticodon binding domain 177 242 1.7E-10 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RPIC12D_RS26135 9c6b219e29c4fbe8b7c43177b476f639 243 SUPERFAMILY SSF47323 171 242 4.51E-13 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC12D_RS26135 9c6b219e29c4fbe8b7c43177b476f639 243 PANTHER PTHR11956:SF6 1 243 2.7E-73 T 22-04-2016 RPIC12D_RS26135 9c6b219e29c4fbe8b7c43177b476f639 243 Gene3D G3DSA:3.40.50.620 1 180 5.9E-47 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC12D_RS26135 9c6b219e29c4fbe8b7c43177b476f639 243 SUPERFAMILY SSF52374 1 108 9.38E-36 T 22-04-2016 RPIC12D_RS26135 9c6b219e29c4fbe8b7c43177b476f639 243 SUPERFAMILY SSF52374 139 187 9.38E-36 T 22-04-2016 RPIC12D_RS26135 9c6b219e29c4fbe8b7c43177b476f639 243 PANTHER PTHR11956 1 243 2.7E-73 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC12D_RS03565 c898333cddf9ec20706b823821bfdebd 167 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 11 153 2.5E-24 T 22-04-2016 IPR013362 Pilus modification type IV, PilV RPIC12D_RS04810 8d1c187611bb82f5ca8bdc6b2a9fe212 239 SUPERFAMILY SSF100950 60 236 1.51E-40 T 22-04-2016 RPIC12D_RS04810 8d1c187611bb82f5ca8bdc6b2a9fe212 239 PANTHER PTHR32479:SF11 12 237 3.4E-39 T 22-04-2016 RPIC12D_RS04810 8d1c187611bb82f5ca8bdc6b2a9fe212 239 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 138 236 2.0E-30 T 22-04-2016 IPR003741 LUD domain RPIC12D_RS04810 8d1c187611bb82f5ca8bdc6b2a9fe212 239 PANTHER PTHR32479 12 237 3.4E-39 T 22-04-2016 RPIC12D_RS04810 8d1c187611bb82f5ca8bdc6b2a9fe212 239 Gene3D G3DSA:3.40.50.10420 60 236 8.1E-46 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RPIC12D_RS14385 603e6636a584dfbc4056e70d71870e15 140 PANTHER PTHR21256 3 132 6.2E-61 T 22-04-2016 RPIC12D_RS14385 603e6636a584dfbc4056e70d71870e15 140 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 54 107 5.0E-25 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 RPIC12D_RS14385 603e6636a584dfbc4056e70d71870e15 140 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 31 105 5.3E-36 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 RPIC12D_RS14385 603e6636a584dfbc4056e70d71870e15 140 SUPERFAMILY SSF141734 4 111 8.37E-48 T 22-04-2016 RPIC12D_RS14385 603e6636a584dfbc4056e70d71870e15 140 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 5 109 32.353 T 22-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 RPIC12D_RS03960 872ad91b6b225febf9e5f5dac3709f9a 221 Pfam PF01323 DSBA-like thioredoxin domain 5 187 3.9E-14 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RPIC12D_RS03960 872ad91b6b225febf9e5f5dac3709f9a 221 Gene3D G3DSA:3.40.30.10 1 64 1.2E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS03960 872ad91b6b225febf9e5f5dac3709f9a 221 Gene3D G3DSA:1.10.472.60 65 177 5.4E-41 T 22-04-2016 IPR023169 UPF0413, central domain RPIC12D_RS03960 872ad91b6b225febf9e5f5dac3709f9a 221 SUPERFAMILY SSF52833 1 216 1.21E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS02700 82d669b804f2d5598bcbeb156c3f5c14 157 Pfam PF07811 TadE-like protein 29 71 4.5E-16 T 22-04-2016 IPR012495 TadE-like RPIC12D_RS09935 794b1dae205f9ea54f2af9b8e0363d52 318 Pfam PF06166 Protein of unknown function (DUF979) 6 316 5.4E-131 T 22-04-2016 IPR009323 Protein of unknown function DUF979 RPIC12D_RS04665 254dff5e5565b2455ca299332a6dc8d1 613 PANTHER PTHR11802:SF30 133 271 7.5E-13 T 22-04-2016 RPIC12D_RS04665 254dff5e5565b2455ca299332a6dc8d1 613 SUPERFAMILY SSF53474 406 578 3.21E-62 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS04665 254dff5e5565b2455ca299332a6dc8d1 613 SUPERFAMILY SSF53474 109 363 3.21E-62 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS04665 254dff5e5565b2455ca299332a6dc8d1 613 PANTHER PTHR11802 133 271 7.5E-13 T 22-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 RPIC12D_RS04665 254dff5e5565b2455ca299332a6dc8d1 613 Gene3D G3DSA:3.40.50.1820 446 551 1.3E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS04665 254dff5e5565b2455ca299332a6dc8d1 613 Gene3D G3DSA:3.40.50.1820 391 398 1.3E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS04665 254dff5e5565b2455ca299332a6dc8d1 613 Gene3D G3DSA:3.40.50.1820 103 359 1.3E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS04665 254dff5e5565b2455ca299332a6dc8d1 613 Pfam PF00450 Serine carboxypeptidase 124 279 5.5E-16 T 22-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 RPIC12D_RS04605 3b5587d2286e874d415d8d232b355228 243 Gene3D G3DSA:1.10.287.950 106 197 1.2E-10 T 22-04-2016 RPIC12D_RS04605 3b5587d2286e874d415d8d232b355228 243 SUPERFAMILY SSF58104 118 213 1.48E-10 T 22-04-2016 RPIC12D_RS04605 3b5587d2286e874d415d8d232b355228 243 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 18 76 8.3E-11 T 22-04-2016 IPR029095 NarX-like, N-terminal RPIC12D_RS01585 6f32b0d0b27e5ece5627bbb92ac8702f 320 PANTHER PTHR30606 1 298 1.2E-47 T 22-04-2016 RPIC12D_RS01585 6f32b0d0b27e5ece5627bbb92ac8702f 320 PANTHER PTHR30606:SF6 1 298 1.2E-47 T 22-04-2016 RPIC12D_RS01585 6f32b0d0b27e5ece5627bbb92ac8702f 320 PIRSF PIRSF028561 1 319 2.7E-130 T 22-04-2016 IPR014548 Predicted acyltransferase RPIC12D_RS01585 6f32b0d0b27e5ece5627bbb92ac8702f 320 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 95 270 2.3E-9 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RPIC12D_RS02580 036da5c8130e5a95173599b84f1cd3c2 245 Pfam PF04403 Paraquat-inducible protein A 79 235 4.2E-53 T 22-04-2016 IPR007498 Paraquat-inducible protein A RPIC12D_RS02580 036da5c8130e5a95173599b84f1cd3c2 245 PANTHER PTHR30462 62 244 3.0E-51 T 22-04-2016 RPIC12D_RS02580 036da5c8130e5a95173599b84f1cd3c2 245 PANTHER PTHR30462:SF3 62 244 3.0E-51 T 22-04-2016 RPIC12D_RS04445 672b9586081b7857136591168c643532 230 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 16 189 1.5E-66 T 22-04-2016 IPR022301 Integral membrane protein YjbE RPIC12D_RS04445 672b9586081b7857136591168c643532 230 Pfam PF03741 Integral membrane protein TerC family 18 188 2.6E-42 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 RPIC12D_RS04445 672b9586081b7857136591168c643532 230 PANTHER PTHR30060 1 191 3.9E-41 T 22-04-2016 RPIC12D_RS20395 f9b0e1df003e50cf2cca8b2ad7fc7fc9 377 Pfam PF01526 Tn3 transposase DDE domain 294 377 5.5E-12 T 22-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 RPIC12D_RS11945 d2ac8fc8b4d88b552ffcec795c254ef1 250 SUPERFAMILY SSF51735 24 231 1.54E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS11945 d2ac8fc8b4d88b552ffcec795c254ef1 250 Gene3D G3DSA:3.40.50.720 24 240 9.6E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS11945 d2ac8fc8b4d88b552ffcec795c254ef1 250 PANTHER PTHR14097 17 249 4.4E-63 T 22-04-2016 RPIC12D_RS11945 d2ac8fc8b4d88b552ffcec795c254ef1 250 Pfam PF13460 NAD(P)H-binding 31 183 1.1E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS11945 d2ac8fc8b4d88b552ffcec795c254ef1 250 PANTHER PTHR14097:SF7 17 249 4.4E-63 T 22-04-2016 RPIC12D_RS06365 7228fbfe56962ac6764d34fbff3e8094 85 SUPERFAMILY SSF54285 1 83 1.36E-21 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RPIC12D_RS06365 7228fbfe56962ac6764d34fbff3e8094 85 PANTHER PTHR33359 1 85 2.5E-22 T 22-04-2016 RPIC12D_RS06365 7228fbfe56962ac6764d34fbff3e8094 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 3 85 1.5E-25 T 22-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 RPIC12D_RS06365 7228fbfe56962ac6764d34fbff3e8094 85 Gene3D G3DSA:3.10.20.30 1 85 6.9E-25 T 22-04-2016 IPR012675 Beta-grasp domain RPIC12D_RS06365 7228fbfe56962ac6764d34fbff3e8094 85 Pfam PF02597 ThiS family 6 85 8.3E-19 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RPIC12D_RS05915 dfe357b6749fc30071dc79637edbe3d9 285 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 8 218 9.4E-24 T 22-04-2016 RPIC12D_RS07380 7f1e905fd032e7274cf55c571dbc9b01 300 Pfam PF04116 Fatty acid hydroxylase superfamily 88 235 2.8E-23 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 RPIC12D_RS04105 d6d467cdf9f6d7138502de8e086a4c20 62 Pfam PF01361 Tautomerase enzyme 5 57 7.0E-13 T 22-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 RPIC12D_RS04105 d6d467cdf9f6d7138502de8e086a4c20 62 PANTHER PTHR35530:SF1 1 62 1.0E-11 T 22-04-2016 RPIC12D_RS04105 d6d467cdf9f6d7138502de8e086a4c20 62 PANTHER PTHR35530 1 62 1.0E-11 T 22-04-2016 RPIC12D_RS04105 d6d467cdf9f6d7138502de8e086a4c20 62 SUPERFAMILY SSF55331 2 61 5.5E-19 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily RPIC12D_RS04105 d6d467cdf9f6d7138502de8e086a4c20 62 Gene3D G3DSA:3.30.429.20 1 61 1.1E-24 T 22-04-2016 RPIC12D_RS18365 2613779996555959254ad274923e1811 147 Gene3D G3DSA:3.40.50.300 4 48 5.7E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS03695 26fa66e3135de01e2a20b179e0eff41a 112 PANTHER PTHR33215:SF3 5 111 4.3E-24 T 22-04-2016 RPIC12D_RS03695 26fa66e3135de01e2a20b179e0eff41a 112 Gene3D G3DSA:1.10.10.60 13 99 4.3E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS03695 26fa66e3135de01e2a20b179e0eff41a 112 Pfam PF01527 Transposase 10 91 5.4E-8 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS03695 26fa66e3135de01e2a20b179e0eff41a 112 PANTHER PTHR33215 5 111 4.3E-24 T 22-04-2016 RPIC12D_RS03695 26fa66e3135de01e2a20b179e0eff41a 112 SUPERFAMILY SSF46689 10 103 2.69E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS01900 869cf2e269b645519d906438981c1264 130 SUPERFAMILY SSF54211 6 130 1.4E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS01900 869cf2e269b645519d906438981c1264 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 31.943 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid RPIC12D_RS01900 869cf2e269b645519d906438981c1264 130 PANTHER PTHR21569 7 130 1.3E-62 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS01900 869cf2e269b645519d906438981c1264 130 Gene3D G3DSA:3.30.230.10 6 130 1.6E-49 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC12D_RS01900 869cf2e269b645519d906438981c1264 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.7E-45 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS01900 869cf2e269b645519d906438981c1264 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 RPIC12D_RS03210 e014a93ba91c0ce4362689366ced3df1 970 Pfam PF01526 Tn3 transposase DDE domain 564 946 6.6E-115 T 22-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 RPIC12D_RS03210 e014a93ba91c0ce4362689366ced3df1 970 Pfam PF13700 Domain of unknown function (DUF4158) 11 157 1.0E-19 T 22-04-2016 IPR025296 Domain of unknown function DUF4158 RPIC12D_RS00020 d36c1c0122886f28353d736801bbd34d 297 Pfam PF12686 Protein of unknown function (DUF3800) 48 265 1.8E-34 T 22-04-2016 IPR024524 Protein of unknown function DUF3800 RPIC12D_RS15130 72af880bee629fdbc27314e3d5a27b85 298 PIRSF PIRSF007580 1 275 1.6E-64 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 RPIC12D_RS15130 72af880bee629fdbc27314e3d5a27b85 298 PANTHER PTHR39456:SF2 20 271 3.3E-50 T 22-04-2016 RPIC12D_RS15130 72af880bee629fdbc27314e3d5a27b85 298 PANTHER PTHR39456 20 271 3.3E-50 T 22-04-2016 RPIC12D_RS15130 72af880bee629fdbc27314e3d5a27b85 298 Pfam PF10118 Predicted metal-dependent hydrolase 5 256 2.2E-76 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 RPIC12D_RS07365 bd46c9445087ead0b3e12bf31d212a80 346 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 207 271 3.1E-26 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site RPIC12D_RS07365 bd46c9445087ead0b3e12bf31d212a80 346 PANTHER PTHR22602:SF0 34 303 3.5E-39 T 22-04-2016 RPIC12D_RS07365 bd46c9445087ead0b3e12bf31d212a80 346 Gene3D G3DSA:3.30.70.1400 38 120 1.6E-26 T 22-04-2016 RPIC12D_RS07365 bd46c9445087ead0b3e12bf31d212a80 346 PANTHER PTHR22602 34 303 3.5E-39 T 22-04-2016 RPIC12D_RS07365 bd46c9445087ead0b3e12bf31d212a80 346 Pfam PF01571 Aminomethyltransferase folate-binding domain 35 236 2.0E-16 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal RPIC12D_RS07365 bd46c9445087ead0b3e12bf31d212a80 346 SUPERFAMILY SSF103025 14 262 6.75E-62 T 22-04-2016 RPIC12D_RS16265 69c2ee37ef3552507ebc1f15f2068708 528 PANTHER PTHR11101 43 527 1.5E-235 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RPIC12D_RS16265 69c2ee37ef3552507ebc1f15f2068708 528 Pfam PF01384 Phosphate transporter family 71 222 1.3E-32 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RPIC12D_RS16265 69c2ee37ef3552507ebc1f15f2068708 528 Pfam PF01384 Phosphate transporter family 240 517 4.8E-44 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RPIC12D_RS16265 69c2ee37ef3552507ebc1f15f2068708 528 PANTHER PTHR11101:SF61 43 527 1.5E-235 T 22-04-2016 RPIC12D_RS21290 f1881781b568a52eff6ab7748458d050 309 Pfam PF00577 Outer membrane usher protein 1 302 1.3E-105 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS21290 f1881781b568a52eff6ab7748458d050 309 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 110 120 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site RPIC12D_RS21290 f1881781b568a52eff6ab7748458d050 309 PANTHER PTHR30451 1 301 1.6E-129 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS21290 f1881781b568a52eff6ab7748458d050 309 PANTHER PTHR30451:SF2 1 301 1.6E-129 T 22-04-2016 RPIC12D_RS15795 939efdd73ae8e64e2afe9aab01d6438c 260 PANTHER PTHR12110:SF3 1 253 1.3E-90 T 22-04-2016 RPIC12D_RS15795 939efdd73ae8e64e2afe9aab01d6438c 260 SUPERFAMILY SSF51658 1 255 6.97E-84 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC12D_RS15795 939efdd73ae8e64e2afe9aab01d6438c 260 PANTHER PTHR12110 1 253 1.3E-90 T 22-04-2016 RPIC12D_RS15795 939efdd73ae8e64e2afe9aab01d6438c 260 Gene3D G3DSA:3.20.20.150 1 254 4.1E-90 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC12D_RS15795 939efdd73ae8e64e2afe9aab01d6438c 260 PIRSF PIRSF006241 1 260 8.7E-96 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 RPIC12D_RS15795 939efdd73ae8e64e2afe9aab01d6438c 260 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 3 253 5.2E-113 T 22-04-2016 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 RPIC12D_RS15795 939efdd73ae8e64e2afe9aab01d6438c 260 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 1.6E-33 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC12D_RS03910 4a37dc754135c2834181d11e1760bbb7 361 Gene3D G3DSA:3.20.20.410 50 352 3.8E-64 T 22-04-2016 IPR002763 Protein of unknown function DUF72 RPIC12D_RS03910 4a37dc754135c2834181d11e1760bbb7 361 PANTHER PTHR30348 1 357 4.9E-19 T 22-04-2016 RPIC12D_RS03910 4a37dc754135c2834181d11e1760bbb7 361 Pfam PF01904 Protein of unknown function DUF72 82 350 4.1E-38 T 22-04-2016 IPR002763 Protein of unknown function DUF72 RPIC12D_RS03910 4a37dc754135c2834181d11e1760bbb7 361 SUPERFAMILY SSF117396 61 352 1.44E-45 T 22-04-2016 IPR002763 Protein of unknown function DUF72 RPIC12D_RS13800 1431ce69191becd648d06ed0f17ba50f 124 PANTHER PTHR14289 7 121 1.6E-45 T 22-04-2016 RPIC12D_RS13800 1431ce69191becd648d06ed0f17ba50f 124 Pfam PF04379 Protein of unknown function (DUF525) 16 101 2.7E-35 T 22-04-2016 IPR007474 ApaG domain RPIC12D_RS13800 1431ce69191becd648d06ed0f17ba50f 124 Hamap MF_00791 Protein ApaG [apaG]. 1 124 32.559 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG RPIC12D_RS13800 1431ce69191becd648d06ed0f17ba50f 124 SUPERFAMILY SSF110069 5 124 1.23E-49 T 22-04-2016 IPR007474 ApaG domain RPIC12D_RS13800 1431ce69191becd648d06ed0f17ba50f 124 Gene3D G3DSA:2.60.40.1470 5 124 1.0E-47 T 22-04-2016 IPR007474 ApaG domain RPIC12D_RS01750 20a1232974e767e87b00e17cfe150154 209 Gene3D G3DSA:3.40.50.150 28 207 1.1E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS01750 20a1232974e767e87b00e17cfe150154 209 SUPERFAMILY SSF53335 13 206 3.14E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS01750 20a1232974e767e87b00e17cfe150154 209 PANTHER PTHR32183:SF6 18 206 1.7E-13 T 22-04-2016 RPIC12D_RS01750 20a1232974e767e87b00e17cfe150154 209 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 14 206 5.0E-46 T 22-04-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67 RPIC12D_RS01750 20a1232974e767e87b00e17cfe150154 209 PANTHER PTHR32183 18 206 1.7E-13 T 22-04-2016 RPIC12D_RS12775 a060ce3fb9690bce02f0144d88d6e094 198 Gene3D G3DSA:2.40.128.110 22 191 1.5E-47 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC12D_RS12775 a060ce3fb9690bce02f0144d88d6e094 198 PANTHER PTHR34406 1 197 1.5E-36 T 22-04-2016 RPIC12D_RS12775 a060ce3fb9690bce02f0144d88d6e094 198 SUPERFAMILY SSF101874 21 191 1.27E-46 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC12D_RS12775 a060ce3fb9690bce02f0144d88d6e094 198 SMART SM00867 24 189 1.7E-56 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC12D_RS12775 a060ce3fb9690bce02f0144d88d6e094 198 PANTHER PTHR34406:SF1 1 197 1.5E-36 T 22-04-2016 RPIC12D_RS12775 a060ce3fb9690bce02f0144d88d6e094 198 Pfam PF04264 YceI-like domain 25 186 8.6E-34 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC12D_RS27055 439218146f54765c2037a3cbc2b3d29d 148 Gene3D G3DSA:1.10.10.10 55 116 1.4E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS27055 439218146f54765c2037a3cbc2b3d29d 148 SUPERFAMILY SSF46785 56 130 2.41E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS27055 439218146f54765c2037a3cbc2b3d29d 148 Pfam PF05732 Firmicute plasmid replication protein (RepL) 14 147 3.2E-12 T 22-04-2016 IPR008813 Plasmid replication protein, RepL GO:0006260|GO:0006276 RPIC12D_RS06595 28eaa3f0c90467a1519a5cf55df3d784 175 PANTHER PTHR30087 1 172 5.0E-59 T 22-04-2016 RPIC12D_RS06595 28eaa3f0c90467a1519a5cf55df3d784 175 Gene3D G3DSA:3.40.50.1000 78 145 3.4E-4 T 22-04-2016 IPR023214 HAD-like domain RPIC12D_RS06595 28eaa3f0c90467a1519a5cf55df3d784 175 PANTHER PTHR30087:SF1 1 172 5.0E-59 T 22-04-2016 RPIC12D_RS06595 28eaa3f0c90467a1519a5cf55df3d784 175 Pfam PF04463 Protein of unknown function (DUF523) 4 150 1.7E-43 T 22-04-2016 IPR007553 Domain of unknown function DUF523 RPIC12D_RS12515 9a9f0cfc671fe37d3f8b435845dd50e5 129 PANTHER PTHR33931 1 117 3.4E-23 T 22-04-2016 RPIC12D_RS12515 9a9f0cfc671fe37d3f8b435845dd50e5 129 Pfam PF03788 LrgA family 12 105 4.6E-27 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 RPIC12D_RS12515 9a9f0cfc671fe37d3f8b435845dd50e5 129 PANTHER PTHR33931:SF2 1 117 3.4E-23 T 22-04-2016 RPIC12D_RS10555 ab5da61c4be224031ebb866ed6d38390 236 SUPERFAMILY SSF48613 4 229 2.47E-70 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 RPIC12D_RS10555 ab5da61c4be224031ebb866ed6d38390 236 Pfam PF03070 TENA/THI-4/PQQC family 14 223 3.0E-52 T 22-04-2016 IPR004305 Thiaminase-2/PQQC RPIC12D_RS10555 ab5da61c4be224031ebb866ed6d38390 236 Gene3D G3DSA:1.20.910.10 6 230 2.2E-109 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 RPIC12D_RS10555 ab5da61c4be224031ebb866ed6d38390 236 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 9 231 4.8E-101 T 22-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 RPIC12D_RS10555 ab5da61c4be224031ebb866ed6d38390 236 PANTHER PTHR40279 9 228 2.9E-106 T 22-04-2016 RPIC12D_RS10555 ab5da61c4be224031ebb866ed6d38390 236 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 236 132.925 T 22-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 RPIC12D_RS10555 ab5da61c4be224031ebb866ed6d38390 236 PANTHER PTHR40279:SF2 9 228 2.9E-106 T 22-04-2016 RPIC12D_RS00190 e213d982625ad3b3e12993e090dcb200 302 SUPERFAMILY SSF117892 101 218 1.2E-10 T 22-04-2016 IPR001107 Band 7 domain RPIC12D_RS00190 e213d982625ad3b3e12993e090dcb200 302 Pfam PF01145 SPFH domain / Band 7 family 36 234 2.6E-30 T 22-04-2016 IPR001107 Band 7 domain RPIC12D_RS12605 bfd67fac13301b82ffb0cf154a063d5d 212 Pfam PF00717 Peptidase S24-like 113 167 9.2E-11 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B RPIC12D_RS12605 bfd67fac13301b82ffb0cf154a063d5d 212 SUPERFAMILY SSF51306 78 193 2.09E-20 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RPIC12D_RS12605 bfd67fac13301b82ffb0cf154a063d5d 212 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 110 120 6.9E-5 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RPIC12D_RS12605 bfd67fac13301b82ffb0cf154a063d5d 212 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 149 161 6.9E-5 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RPIC12D_RS12605 bfd67fac13301b82ffb0cf154a063d5d 212 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 121 132 6.9E-5 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RPIC12D_RS12605 bfd67fac13301b82ffb0cf154a063d5d 212 Gene3D G3DSA:2.10.109.10 97 196 1.0E-25 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RPIC12D_RS12605 bfd67fac13301b82ffb0cf154a063d5d 212 PANTHER PTHR33516 1 198 1.3E-27 T 22-04-2016 RPIC12D_RS12605 bfd67fac13301b82ffb0cf154a063d5d 212 Gene3D G3DSA:1.10.10.10 4 57 3.3E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS05635 e7db2ef92dbe77ffc4e1cecfb093f99c 288 Gene3D G3DSA:3.40.390.10 43 268 4.6E-33 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RPIC12D_RS05635 e7db2ef92dbe77ffc4e1cecfb093f99c 288 Pfam PF06167 Glucose-regulated metallo-peptidase M90 11 268 9.0E-89 T 22-04-2016 IPR010384 MtfA family RPIC12D_RS05635 e7db2ef92dbe77ffc4e1cecfb093f99c 288 SUPERFAMILY SSF55486 47 270 6.59E-38 T 22-04-2016 RPIC12D_RS05635 e7db2ef92dbe77ffc4e1cecfb093f99c 288 PANTHER PTHR30164 1 282 3.7E-74 T 22-04-2016 RPIC12D_RS03080 9055e95bfcd8d1fc0ad0dacf27d3ce8d 381 Gene3D G3DSA:3.30.160.100 20 103 7.4E-4 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RPIC12D_RS07555 0403bb7d54b1b54f240ecf35b8e8b552 157 PANTHER PTHR37290:SF1 4 148 8.2E-67 T 22-04-2016 RPIC12D_RS07555 0403bb7d54b1b54f240ecf35b8e8b552 157 PANTHER PTHR37290 4 148 8.2E-67 T 22-04-2016 RPIC12D_RS07555 0403bb7d54b1b54f240ecf35b8e8b552 157 Pfam PF05360 yiaA/B two helix domain 77 129 4.2E-20 T 22-04-2016 IPR008024 YiaAB two helix RPIC12D_RS07555 0403bb7d54b1b54f240ecf35b8e8b552 157 Pfam PF05360 yiaA/B two helix domain 14 66 1.7E-20 T 22-04-2016 IPR008024 YiaAB two helix RPIC12D_RS08265 8f15c35aaf643b981c7c0b0650e68299 344 PANTHER PTHR11538:SF40 93 343 3.4E-88 T 22-04-2016 RPIC12D_RS08265 8f15c35aaf643b981c7c0b0650e68299 344 SUPERFAMILY SSF46589 15 100 2.62E-19 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RPIC12D_RS08265 8f15c35aaf643b981c7c0b0650e68299 344 PANTHER PTHR11538 93 343 3.4E-88 T 22-04-2016 RPIC12D_RS08265 8f15c35aaf643b981c7c0b0650e68299 344 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 88 1.8E-19 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RPIC12D_RS08265 8f15c35aaf643b981c7c0b0650e68299 344 Gene3D G3DSA:3.30.930.10 11 343 9.6E-123 T 22-04-2016 RPIC12D_RS08265 8f15c35aaf643b981c7c0b0650e68299 344 Pfam PF01409 tRNA synthetases class II core domain (F) 93 343 9.4E-94 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 RPIC12D_RS08265 8f15c35aaf643b981c7c0b0650e68299 344 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 343 45.7 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 RPIC12D_RS08265 8f15c35aaf643b981c7c0b0650e68299 344 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 343 4.4E-96 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RPIC12D_RS08265 8f15c35aaf643b981c7c0b0650e68299 344 SUPERFAMILY SSF55681 93 343 1.19E-73 T 22-04-2016 RPIC12D_RS14695 cd26189dc72d81653b8f5bfd819d589d 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.654 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid RPIC12D_RS14695 cd26189dc72d81653b8f5bfd819d589d 101 Gene3D G3DSA:4.10.830.10 41 101 7.6E-30 T 22-04-2016 RPIC12D_RS14695 cd26189dc72d81653b8f5bfd819d589d 101 PANTHER PTHR19836 2 101 4.6E-53 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS14695 cd26189dc72d81653b8f5bfd819d589d 101 SUPERFAMILY SSF57716 2 101 2.14E-37 T 22-04-2016 RPIC12D_RS14695 cd26189dc72d81653b8f5bfd819d589d 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.1E-25 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC12D_RS10545 9edbea220cca33188763ee67612eaf5e 24 Pfam PF08042 PqqA family 2 20 1.6E-11 T 22-04-2016 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 UniPathway: UPA00539 RPIC12D_RS10545 9edbea220cca33188763ee67612eaf5e 24 Hamap MF_00656 Coenzyme PQQ synthesis protein A [pqqA]. 2 24 11.767 T 22-04-2016 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 UniPathway: UPA00539 RPIC12D_RS10545 9edbea220cca33188763ee67612eaf5e 24 TIGRFAM TIGR02107 PQQ_syn_pqqA: coenzyme PQQ precursor peptide PqqA 3 23 1.6E-13 T 22-04-2016 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 UniPathway: UPA00539 RPIC12D_RS01520 9338010bde53b80d80a37da5a7509fa5 498 Pfam PF00672 HAMP domain 183 258 6.0E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC12D_RS01520 9338010bde53b80d80a37da5a7509fa5 498 Gene3D G3DSA:3.30.565.10 340 492 1.5E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS01520 9338010bde53b80d80a37da5a7509fa5 498 SMART SM00387 384 496 3.3E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS01520 9338010bde53b80d80a37da5a7509fa5 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 435 2.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS01520 9338010bde53b80d80a37da5a7509fa5 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 474 2.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS01520 9338010bde53b80d80a37da5a7509fa5 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 493 2.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC12D_RS01520 9338010bde53b80d80a37da5a7509fa5 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 389 492 1.1E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS01520 9338010bde53b80d80a37da5a7509fa5 498 SUPERFAMILY SSF47384 254 338 2.35E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS01520 9338010bde53b80d80a37da5a7509fa5 498 SMART SM00388 270 338 6.6E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS01520 9338010bde53b80d80a37da5a7509fa5 498 PANTHER PTHR24423 196 492 1.3E-63 T 22-04-2016 RPIC12D_RS01520 9338010bde53b80d80a37da5a7509fa5 498 PANTHER PTHR24423 29 40 1.3E-63 T 22-04-2016 RPIC12D_RS01520 9338010bde53b80d80a37da5a7509fa5 498 Gene3D G3DSA:1.10.287.130 265 334 3.7E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS01520 9338010bde53b80d80a37da5a7509fa5 498 SUPERFAMILY SSF55874 328 492 3.41E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC12D_RS01520 9338010bde53b80d80a37da5a7509fa5 498 Pfam PF00512 His Kinase A (phospho-acceptor) domain 271 338 2.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC12D_RS01435 05265eb269224d9de4049f0717ebcf79 151 Gene3D G3DSA:3.40.930.10 1 148 8.5E-46 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RPIC12D_RS01435 05265eb269224d9de4049f0717ebcf79 151 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RPIC12D_RS01435 05265eb269224d9de4049f0717ebcf79 151 PANTHER PTHR30505:SF6 1 148 2.5E-42 T 22-04-2016 RPIC12D_RS01435 05265eb269224d9de4049f0717ebcf79 151 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 4 148 6.3E-43 T 22-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RPIC12D_RS01435 05265eb269224d9de4049f0717ebcf79 151 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 148 1.9E-35 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RPIC12D_RS01435 05265eb269224d9de4049f0717ebcf79 151 PANTHER PTHR30505 1 148 2.5E-42 T 22-04-2016 RPIC12D_RS01435 05265eb269224d9de4049f0717ebcf79 151 SUPERFAMILY SSF55804 1 149 1.14E-44 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 RPIC12D_RS13905 9fec20522fd199d024f679c204fda479 605 Gene3D G3DSA:1.10.443.10 316 441 1.3E-5 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS13905 9fec20522fd199d024f679c204fda479 605 SUPERFAMILY SSF56349 315 443 6.18E-5 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC12D_RS10955 767b6804c97dc7d75a5ce06cc812b6bc 387 Gene3D G3DSA:1.20.950.20 154 372 2.7E-63 T 22-04-2016 RPIC12D_RS10955 767b6804c97dc7d75a5ce06cc812b6bc 387 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 157 363 3.8E-49 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 RPIC12D_RS10955 767b6804c97dc7d75a5ce06cc812b6bc 387 SUPERFAMILY SSF81342 154 371 3.69E-44 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RPIC12D_RS10955 767b6804c97dc7d75a5ce06cc812b6bc 387 PANTHER PTHR30074 67 380 8.3E-78 T 22-04-2016 RPIC12D_RS10955 767b6804c97dc7d75a5ce06cc812b6bc 387 Pfam PF01292 Prokaryotic cytochrome b561 160 341 1.5E-15 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RPIC12D_RS10955 767b6804c97dc7d75a5ce06cc812b6bc 387 PANTHER PTHR30074:SF2 67 380 8.3E-78 T 22-04-2016 RPIC12D_RS02340 436deea07e26d6c1871df1735fcc0ab8 567 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 11 559 31.529 T 22-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 RPIC12D_RS02340 436deea07e26d6c1871df1735fcc0ab8 567 PANTHER PTHR22726:SF10 86 419 2.3E-67 T 22-04-2016 RPIC12D_RS02340 436deea07e26d6c1871df1735fcc0ab8 567 Gene3D G3DSA:3.30.2010.10 122 210 6.4E-17 T 22-04-2016 RPIC12D_RS02340 436deea07e26d6c1871df1735fcc0ab8 567 SUPERFAMILY SSF48452 377 502 8.99E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS02340 436deea07e26d6c1871df1735fcc0ab8 567 Gene3D G3DSA:1.25.40.10 229 252 2.1E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS02340 436deea07e26d6c1871df1735fcc0ab8 567 Gene3D G3DSA:1.25.40.10 375 530 2.1E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC12D_RS02340 436deea07e26d6c1871df1735fcc0ab8 567 PANTHER PTHR22726 86 419 2.3E-67 T 22-04-2016 RPIC12D_RS02340 436deea07e26d6c1871df1735fcc0ab8 567 Pfam PF01435 Peptidase family M48 146 322 6.7E-30 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RPIC12D_RS02020 0e8b1a23a160c26be51d3d2f733c3067 813 Gene3D G3DSA:2.60.450.10 98 246 5.0E-13 T 22-04-2016 RPIC12D_RS02020 0e8b1a23a160c26be51d3d2f733c3067 813 Pfam PF04453 Organic solvent tolerance protein 343 719 2.6E-103 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 RPIC12D_RS02020 0e8b1a23a160c26be51d3d2f733c3067 813 Pfam PF03968 OstA-like protein 136 238 1.5E-4 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal RPIC12D_RS02020 0e8b1a23a160c26be51d3d2f733c3067 813 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 66 780 20.308 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 RPIC12D_RS02020 0e8b1a23a160c26be51d3d2f733c3067 813 PANTHER PTHR30189 104 775 8.4E-68 T 22-04-2016 RPIC12D_RS16375 73a71ef82ea2bfb8a2ec5f6a966d4310 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 29 8.1E-11 T 22-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 RPIC12D_RS16375 73a71ef82ea2bfb8a2ec5f6a966d4310 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 7 29 3.0E-11 T 22-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 RPIC12D_RS02380 961f86ce4c9b95c5550c2b2f5e29bfe5 298 PANTHER PTHR22911 6 293 1.3E-128 T 22-04-2016 RPIC12D_RS02380 961f86ce4c9b95c5550c2b2f5e29bfe5 298 TIGRFAM TIGR00688 rarD: protein RarD 7 260 3.0E-72 T 22-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 RPIC12D_RS02380 961f86ce4c9b95c5550c2b2f5e29bfe5 298 PANTHER PTHR22911:SF41 6 293 1.3E-128 T 22-04-2016 RPIC12D_RS02380 961f86ce4c9b95c5550c2b2f5e29bfe5 298 SUPERFAMILY SSF103481 47 145 5.95E-12 T 22-04-2016 RPIC12D_RS02380 961f86ce4c9b95c5550c2b2f5e29bfe5 298 SUPERFAMILY SSF103481 189 286 1.57E-9 T 22-04-2016 RPIC12D_RS02380 961f86ce4c9b95c5550c2b2f5e29bfe5 298 Pfam PF00892 EamA-like transporter family 8 143 1.4E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS05870 77a4e7f8df4e5a129087d68eb17190de 249 PANTHER PTHR11085 3 248 2.7E-84 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 RPIC12D_RS05870 77a4e7f8df4e5a129087d68eb17190de 249 Gene3D G3DSA:3.30.1600.10 130 173 1.2E-22 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain RPIC12D_RS05870 77a4e7f8df4e5a129087d68eb17190de 249 Gene3D G3DSA:3.30.1600.10 41 81 1.2E-22 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain RPIC12D_RS05870 77a4e7f8df4e5a129087d68eb17190de 249 SUPERFAMILY SSF52467 6 248 5.01E-82 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC12D_RS05870 77a4e7f8df4e5a129087d68eb17190de 249 Gene3D G3DSA:3.40.50.1220 14 40 1.3E-45 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC12D_RS05870 77a4e7f8df4e5a129087d68eb17190de 249 Gene3D G3DSA:3.40.50.1220 182 247 1.3E-45 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC12D_RS05870 77a4e7f8df4e5a129087d68eb17190de 249 Gene3D G3DSA:3.40.50.1220 89 129 1.3E-45 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC12D_RS05870 77a4e7f8df4e5a129087d68eb17190de 249 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 25 249 60.408 T 22-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 RPIC12D_RS05870 77a4e7f8df4e5a129087d68eb17190de 249 Pfam PF02146 Sir2 family 32 203 8.0E-46 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 RPIC12D_RS05375 8b47e88198afcbc453b30989ae5b9ff5 175 Gene3D G3DSA:2.160.10.10 6 169 2.9E-46 T 22-04-2016 RPIC12D_RS05375 8b47e88198afcbc453b30989ae5b9ff5 175 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 4.8E-8 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC12D_RS05375 8b47e88198afcbc453b30989ae5b9ff5 175 SUPERFAMILY SSF51161 4 170 1.94E-45 T 22-04-2016 IPR011004 Trimeric LpxA-like RPIC12D_RS05375 8b47e88198afcbc453b30989ae5b9ff5 175 PANTHER PTHR13061 1 159 1.4E-64 T 22-04-2016 RPIC12D_RS01215 416bdc83b563bef1caab12a69fc1955c 363 PANTHER PTHR35457:SF1 256 363 1.9E-55 T 22-04-2016 RPIC12D_RS01215 416bdc83b563bef1caab12a69fc1955c 363 PANTHER PTHR35457:SF1 29 70 1.9E-55 T 22-04-2016 RPIC12D_RS01215 416bdc83b563bef1caab12a69fc1955c 363 PANTHER PTHR35457:SF1 86 233 1.9E-55 T 22-04-2016 RPIC12D_RS01215 416bdc83b563bef1caab12a69fc1955c 363 Pfam PF02628 Cytochrome oxidase assembly protein 31 341 2.6E-87 T 22-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 RPIC12D_RS01215 416bdc83b563bef1caab12a69fc1955c 363 PANTHER PTHR35457 256 363 1.9E-55 T 22-04-2016 RPIC12D_RS01215 416bdc83b563bef1caab12a69fc1955c 363 PANTHER PTHR35457 29 70 1.9E-55 T 22-04-2016 RPIC12D_RS01215 416bdc83b563bef1caab12a69fc1955c 363 PANTHER PTHR35457 86 233 1.9E-55 T 22-04-2016 RPIC12D_RS06720 a10ca5e1a53eb7eaf3d2bfa58fcc9656 373 SUPERFAMILY SSF53474 31 232 1.54E-10 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS06720 a10ca5e1a53eb7eaf3d2bfa58fcc9656 373 SUPERFAMILY SSF53474 273 289 1.54E-10 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS06720 a10ca5e1a53eb7eaf3d2bfa58fcc9656 373 PANTHER PTHR35560 79 365 3.9E-55 T 22-04-2016 RPIC12D_RS06720 a10ca5e1a53eb7eaf3d2bfa58fcc9656 373 Gene3D G3DSA:3.40.50.1820 18 363 1.2E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS06720 a10ca5e1a53eb7eaf3d2bfa58fcc9656 373 PANTHER PTHR35560:SF1 79 365 3.9E-55 T 22-04-2016 RPIC12D_RS07540 e5ce31a9fde873d5b8edb7115833eaa0 302 PANTHER PTHR32196:SF27 1 293 7.2E-130 T 22-04-2016 RPIC12D_RS07540 e5ce31a9fde873d5b8edb7115833eaa0 302 PANTHER PTHR32196 1 293 7.2E-130 T 22-04-2016 RPIC12D_RS07540 e5ce31a9fde873d5b8edb7115833eaa0 302 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 280 7.1E-32 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS24375 9347a9e1841cff4f693ee5aba25111e6 308 PANTHER PTHR11958:SF49 1 308 1.2E-176 T 22-04-2016 RPIC12D_RS24375 9347a9e1841cff4f693ee5aba25111e6 308 Pfam PF00375 Sodium:dicarboxylate symporter family 2 308 6.6E-86 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS24375 9347a9e1841cff4f693ee5aba25111e6 308 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 29 44 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS24375 9347a9e1841cff4f693ee5aba25111e6 308 PANTHER PTHR11958 1 308 1.2E-176 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS24375 9347a9e1841cff4f693ee5aba25111e6 308 PRINTS PR00173 Glutamate-aspartate symporter signature 138 160 7.5E-20 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS24375 9347a9e1841cff4f693ee5aba25111e6 308 PRINTS PR00173 Glutamate-aspartate symporter signature 285 308 7.5E-20 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS24375 9347a9e1841cff4f693ee5aba25111e6 308 PRINTS PR00173 Glutamate-aspartate symporter signature 37 57 7.5E-20 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS24375 9347a9e1841cff4f693ee5aba25111e6 308 PRINTS PR00173 Glutamate-aspartate symporter signature 67 92 7.5E-20 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS24375 9347a9e1841cff4f693ee5aba25111e6 308 SUPERFAMILY SSF118215 2 308 2.35E-93 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS24375 9347a9e1841cff4f693ee5aba25111e6 308 Gene3D G3DSA:1.10.3860.10 2 308 7.5E-86 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC12D_RS00070 5c9a54041d5cfd582ca7db541e6fbac0 217 Gene3D G3DSA:1.10.3720.10 15 213 1.6E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS00070 5c9a54041d5cfd582ca7db541e6fbac0 217 PANTHER PTHR30614 7 217 5.2E-83 T 22-04-2016 RPIC12D_RS00070 5c9a54041d5cfd582ca7db541e6fbac0 217 SUPERFAMILY SSF161098 15 202 1.96E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS00070 5c9a54041d5cfd582ca7db541e6fbac0 217 PANTHER PTHR30614:SF8 7 217 5.2E-83 T 22-04-2016 RPIC12D_RS00070 5c9a54041d5cfd582ca7db541e6fbac0 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 108 1.6E-28 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS00070 5c9a54041d5cfd582ca7db541e6fbac0 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 198 3.4E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS07130 637df8f2b0be129b936ab8ed74632bf1 517 Gene3D G3DSA:1.20.1250.20 40 216 1.1E-18 T 22-04-2016 RPIC12D_RS07130 637df8f2b0be129b936ab8ed74632bf1 517 SUPERFAMILY SSF103473 272 445 2.09E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS07130 637df8f2b0be129b936ab8ed74632bf1 517 SUPERFAMILY SSF103473 17 216 2.09E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS07130 637df8f2b0be129b936ab8ed74632bf1 517 SUPERFAMILY SSF103473 490 513 2.09E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS07130 637df8f2b0be129b936ab8ed74632bf1 517 PANTHER PTHR23501 12 517 2.1E-44 T 22-04-2016 RPIC12D_RS07130 637df8f2b0be129b936ab8ed74632bf1 517 Gene3D G3DSA:1.20.1250.20 288 446 3.1E-7 T 22-04-2016 RPIC12D_RS07130 637df8f2b0be129b936ab8ed74632bf1 517 Pfam PF07690 Major Facilitator Superfamily 40 435 3.2E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS03340 a0b8cc1ca13330f731858ed3ea3034b4 240 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 44 238 3.5E-87 T 22-04-2016 IPR022293 Integrating conjugative element protein, PFL4693 RPIC12D_RS02930 7f0f6909a39e4ec0709fb9f99dd09309 496 SUPERFAMILY SSF53756 106 386 4.5E-9 T 22-04-2016 RPIC12D_RS20525 ec566454a07bcb7d28b3fbcd584e6e10 213 SUPERFAMILY SSF52540 85 209 4.83E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS20525 ec566454a07bcb7d28b3fbcd584e6e10 213 Gene3D G3DSA:3.40.50.300 130 171 4.8E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS15950 4341600a8e6fe4a00505840bc8bd54a3 315 Pfam PF07859 alpha/beta hydrolase fold 79 288 7.1E-61 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RPIC12D_RS15950 4341600a8e6fe4a00505840bc8bd54a3 315 PANTHER PTHR23024 67 305 1.3E-58 T 22-04-2016 RPIC12D_RS15950 4341600a8e6fe4a00505840bc8bd54a3 315 SUPERFAMILY SSF53474 22 308 4.16E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS15950 4341600a8e6fe4a00505840bc8bd54a3 315 Gene3D G3DSA:3.40.50.1820 2 308 1.9E-71 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS07360 05f2884b238d0aa96c5cc7b09bbb0c38 332 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 4 328 4.4E-85 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like RPIC12D_RS07360 05f2884b238d0aa96c5cc7b09bbb0c38 332 PANTHER PTHR30518:SF2 8 329 1.8E-90 T 22-04-2016 RPIC12D_RS07360 05f2884b238d0aa96c5cc7b09bbb0c38 332 PANTHER PTHR30518 8 329 1.8E-90 T 22-04-2016 RPIC12D_RS07360 05f2884b238d0aa96c5cc7b09bbb0c38 332 Pfam PF02618 YceG-like family 40 326 1.6E-83 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like RPIC12D_RS07360 05f2884b238d0aa96c5cc7b09bbb0c38 332 Gene3D G3DSA:3.30.160.60 299 329 6.7E-17 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 RPIC12D_RS04425 302acb92e3923f5c7e2adc0a4ce8485f 457 PANTHER PTHR30624 12 457 2.6E-143 T 22-04-2016 RPIC12D_RS04425 302acb92e3923f5c7e2adc0a4ce8485f 457 Pfam PF01523 Putative modulator of DNA gyrase 43 330 4.7E-55 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC12D_RS04425 302acb92e3923f5c7e2adc0a4ce8485f 457 SUPERFAMILY SSF111283 18 457 1.44E-123 T 22-04-2016 RPIC12D_RS04425 302acb92e3923f5c7e2adc0a4ce8485f 457 PANTHER PTHR30624:SF1 12 457 2.6E-143 T 22-04-2016 RPIC12D_RS02295 2c462006ca7e32f15eb38c5db970afc7 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.3E-159 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RPIC12D_RS02295 2c462006ca7e32f15eb38c5db970afc7 388 Pfam PF08442 ATP-grasp domain 2 202 6.1E-80 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RPIC12D_RS02295 2c462006ca7e32f15eb38c5db970afc7 388 SUPERFAMILY SSF56059 1 238 1.73E-85 T 22-04-2016 RPIC12D_RS02295 2c462006ca7e32f15eb38c5db970afc7 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RPIC12D_RS02295 2c462006ca7e32f15eb38c5db970afc7 388 Gene3D G3DSA:3.30.1490.20 22 95 2.3E-35 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC12D_RS02295 2c462006ca7e32f15eb38c5db970afc7 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.059 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RPIC12D_RS02295 2c462006ca7e32f15eb38c5db970afc7 388 Pfam PF00549 CoA-ligase 262 382 4.0E-26 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RPIC12D_RS02295 2c462006ca7e32f15eb38c5db970afc7 388 Gene3D G3DSA:3.30.470.20 96 239 7.6E-59 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC12D_RS02295 2c462006ca7e32f15eb38c5db970afc7 388 PIRSF PIRSF001554 1 388 3.8E-153 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RPIC12D_RS02295 2c462006ca7e32f15eb38c5db970afc7 388 PANTHER PTHR11815 1 388 4.1E-233 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RPIC12D_RS02295 2c462006ca7e32f15eb38c5db970afc7 388 SUPERFAMILY SSF52210 239 384 1.96E-54 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RPIC12D_RS02295 2c462006ca7e32f15eb38c5db970afc7 388 Gene3D G3DSA:3.40.50.261 241 383 1.1E-64 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RPIC12D_RS16480 3472a7019ce7a26a71bc4ac5d30797e7 404 Pfam PF05940 NnrS protein 25 398 6.3E-104 T 22-04-2016 IPR010266 NnrS RPIC12D_RS14470 53c90ce725b7be73e0548eab6a40f01d 255 Pfam PF02405 Permease MlaE 41 252 1.2E-75 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RPIC12D_RS14470 53c90ce725b7be73e0548eab6a40f01d 255 PANTHER PTHR30188:SF4 1 254 2.7E-97 T 22-04-2016 RPIC12D_RS14470 53c90ce725b7be73e0548eab6a40f01d 255 PANTHER PTHR30188 1 254 2.7E-97 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RPIC12D_RS14470 53c90ce725b7be73e0548eab6a40f01d 255 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 34 254 2.3E-80 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RPIC12D_RS01885 922d88bb0af38ab58738f8a32ae65df8 267 Pfam PF11227 Protein of unknown function (DUF3025) 57 259 1.9E-77 T 22-04-2016 IPR021390 Protein of unknown function DUF3025 RPIC12D_RS10110 42e1f3532a36ebc86233c737cf7b2d11 257 PANTHER PTHR10859:SF99 4 147 1.9E-31 T 22-04-2016 RPIC12D_RS10110 42e1f3532a36ebc86233c737cf7b2d11 257 Gene3D G3DSA:3.90.550.10 9 145 5.8E-17 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS10110 42e1f3532a36ebc86233c737cf7b2d11 257 Pfam PF00535 Glycosyl transferase family 2 11 147 5.6E-21 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RPIC12D_RS10110 42e1f3532a36ebc86233c737cf7b2d11 257 PANTHER PTHR10859 4 147 1.9E-31 T 22-04-2016 RPIC12D_RS10110 42e1f3532a36ebc86233c737cf7b2d11 257 SUPERFAMILY SSF53448 4 152 3.56E-29 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC12D_RS09930 5f04df8eb6112f4066d8d89b9d566446 341 PANTHER PTHR33376 4 339 1.4E-44 T 22-04-2016 RPIC12D_RS09930 5f04df8eb6112f4066d8d89b9d566446 341 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 50 299 2.2E-32 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 RPIC12D_RS12460 b77fecb13bee19866ccc56c276f116ed 1426 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 56 1414 1.8E-204 T 22-04-2016 IPR011836 Conserved hypothetical protein CHP02099 RPIC12D_RS12460 b77fecb13bee19866ccc56c276f116ed 1426 PANTHER PTHR38690 50 362 1.5E-117 T 22-04-2016 RPIC12D_RS12460 b77fecb13bee19866ccc56c276f116ed 1426 PANTHER PTHR38690 388 685 1.5E-117 T 22-04-2016 RPIC12D_RS12460 b77fecb13bee19866ccc56c276f116ed 1426 PANTHER PTHR38690 702 1426 1.5E-117 T 22-04-2016 RPIC12D_RS12460 b77fecb13bee19866ccc56c276f116ed 1426 Pfam PF13116 Protein of unknown function 616 911 3.4E-60 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 RPIC12D_RS12460 b77fecb13bee19866ccc56c276f116ed 1426 Pfam PF13502 AsmA-like C-terminal region 1155 1407 2.8E-57 T 22-04-2016 IPR032712 AsmA-like, C-terminal RPIC12D_RS07520 afe4f47c21fcc58d0a37350d3edaf969 190 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 175 1.2E-61 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RPIC12D_RS07520 afe4f47c21fcc58d0a37350d3edaf969 190 PANTHER PTHR36917 1 186 2.0E-65 T 22-04-2016 RPIC12D_RS07520 afe4f47c21fcc58d0a37350d3edaf969 190 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.673 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RPIC12D_RS07520 afe4f47c21fcc58d0a37350d3edaf969 190 Pfam PF04279 Intracellular septation protein A 1 175 4.5E-72 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RPIC12D_RS07520 afe4f47c21fcc58d0a37350d3edaf969 190 PANTHER PTHR36917:SF1 1 186 2.0E-65 T 22-04-2016 RPIC12D_RS05080 d041c2a109f879b8330499c7697590ef 803 SUPERFAMILY SSF51011 602 682 6.62E-19 T 22-04-2016 RPIC12D_RS05080 d041c2a109f879b8330499c7697590ef 803 Pfam PF01055 Glycosyl hydrolases family 31 243 687 3.5E-115 T 22-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 RPIC12D_RS05080 d041c2a109f879b8330499c7697590ef 803 SUPERFAMILY SSF74650 10 249 2.29E-47 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RPIC12D_RS05080 d041c2a109f879b8330499c7697590ef 803 Pfam PF13802 Galactose mutarotase-like 149 218 1.4E-21 T 22-04-2016 IPR025887 Glycoside hydrolase family 31, N-terminal domain RPIC12D_RS05080 d041c2a109f879b8330499c7697590ef 803 SUPERFAMILY SSF51445 254 597 2.91E-68 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RPIC12D_RS05080 d041c2a109f879b8330499c7697590ef 803 PANTHER PTHR22762:SF7 137 780 1.9E-212 T 22-04-2016 RPIC12D_RS05080 d041c2a109f879b8330499c7697590ef 803 PANTHER PTHR22762 137 780 1.9E-212 T 22-04-2016 RPIC12D_RS09690 a4e2b9575e5ae637f2aa2466c4e0d147 344 Gene3D G3DSA:3.40.50.720 169 252 6.1E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS09690 a4e2b9575e5ae637f2aa2466c4e0d147 344 Pfam PF13478 XdhC Rossmann domain 173 316 6.6E-35 T 22-04-2016 IPR027051 XdhC Rossmann domain RPIC12D_RS09690 a4e2b9575e5ae637f2aa2466c4e0d147 344 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 25 317 5.3E-101 T 22-04-2016 IPR014308 Xanthine dehydrogenase accessory protein XdhC RPIC12D_RS09690 a4e2b9575e5ae637f2aa2466c4e0d147 344 SUPERFAMILY SSF51735 167 248 5.25E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS09690 a4e2b9575e5ae637f2aa2466c4e0d147 344 Pfam PF02625 XdhC and CoxI family 19 75 8.8E-19 T 22-04-2016 IPR003777 XdhC- CoxI RPIC12D_RS09690 a4e2b9575e5ae637f2aa2466c4e0d147 344 PANTHER PTHR30388:SF5 8 319 1.1E-69 T 22-04-2016 RPIC12D_RS09690 a4e2b9575e5ae637f2aa2466c4e0d147 344 PANTHER PTHR30388 8 319 1.1E-69 T 22-04-2016 RPIC12D_RS13455 761f606ff4b3149f36616d42814ed9ac 385 Gene3D G3DSA:1.10.260.40 263 297 9.9E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC12D_RS14555 f9a4a7c82e3506dd8c419c22c858f1f2 77 Pfam PF13627 Prokaryotic lipoprotein-attachment site 10 32 6.2E-9 T 22-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site RPIC12D_RS01725 002b6e7d378d822be91c56a8650c9517 138 Pfam PF06155 Protein of unknown function (DUF971) 14 98 3.1E-30 T 22-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 RPIC12D_RS01725 002b6e7d378d822be91c56a8650c9517 138 PANTHER PTHR35303 1 129 4.1E-44 T 22-04-2016 RPIC12D_RS01725 002b6e7d378d822be91c56a8650c9517 138 PANTHER PTHR35303:SF1 1 129 4.1E-44 T 22-04-2016 RPIC12D_RS08935 25f0316baa3227c805f2748b72dca4d4 267 Pfam PF14023 Protein of unknown function (DUF4239) 52 247 8.5E-19 T 22-04-2016 IPR025333 Protein of unknown function DUF4239 RPIC12D_RS12610 2c360f5a3946d1e09a3a5aca96d5f9d5 284 TIGRFAM TIGR04474 tcm_partner: three-Cys-motif partner protein 35 274 2.2E-34 T 22-04-2016 IPR031009 Three-Cys-motif partner protein RPIC12D_RS04300 3850d359089606b7242b91296996ee30 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 215 1.3E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS04300 3850d359089606b7242b91296996ee30 217 PANTHER PTHR30450 1 217 4.7E-114 T 22-04-2016 RPIC12D_RS04300 3850d359089606b7242b91296996ee30 217 PANTHER PTHR30450:SF1 1 217 4.7E-114 T 22-04-2016 RPIC12D_RS04300 3850d359089606b7242b91296996ee30 217 SUPERFAMILY SSF161098 7 211 3.27E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS04300 3850d359089606b7242b91296996ee30 217 Gene3D G3DSA:1.10.3720.10 7 215 2.2E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS03215 0d0a82fcfe0afb3e42654223f3aa8fb7 118 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 60 94 1.0E-13 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 RPIC12D_RS03215 0d0a82fcfe0afb3e42654223f3aa8fb7 118 SUPERFAMILY SSF57783 57 94 9.01E-13 T 22-04-2016 RPIC12D_RS03215 0d0a82fcfe0afb3e42654223f3aa8fb7 118 PANTHER PTHR11390 5 95 2.9E-15 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC12D_RS03215 0d0a82fcfe0afb3e42654223f3aa8fb7 118 Gene3D G3DSA:3.30.65.10 63 94 3.0E-13 T 22-04-2016 RPIC12D_RS03215 0d0a82fcfe0afb3e42654223f3aa8fb7 118 Gene3D G3DSA:1.10.460.10 5 62 5.7E-5 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RPIC12D_RS03215 0d0a82fcfe0afb3e42654223f3aa8fb7 118 SUPERFAMILY SSF56712 4 70 1.03E-8 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain RPIC12D_RS01800 64afc9e0ac9624088356441411e38160 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 5.4E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS01800 64afc9e0ac9624088356441411e38160 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 5.4E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS01800 64afc9e0ac9624088356441411e38160 196 Gene3D G3DSA:1.10.10.60 2 56 1.8E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS01800 64afc9e0ac9624088356441411e38160 196 PANTHER PTHR30055 2 191 4.7E-23 T 22-04-2016 RPIC12D_RS01800 64afc9e0ac9624088356441411e38160 196 SUPERFAMILY SSF48498 77 191 5.09E-20 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC12D_RS01800 64afc9e0ac9624088356441411e38160 196 Gene3D G3DSA:1.10.357.10 57 194 8.7E-56 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC12D_RS01800 64afc9e0ac9624088356441411e38160 196 SUPERFAMILY SSF46689 2 69 2.67E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC12D_RS01800 64afc9e0ac9624088356441411e38160 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 55 5.2E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC12D_RS04720 9b9d6a4ab12c09af92803a5354ecceac 335 PANTHER PTHR32196 30 331 2.0E-97 T 22-04-2016 RPIC12D_RS04720 9b9d6a4ab12c09af92803a5354ecceac 335 PANTHER PTHR32196:SF35 30 331 2.0E-97 T 22-04-2016 RPIC12D_RS04720 9b9d6a4ab12c09af92803a5354ecceac 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 320 1.6E-46 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS10490 5221468d1ea0d89e1cd54d820b01b2a2 156 PANTHER PTHR33570 17 143 1.7E-40 T 22-04-2016 RPIC12D_RS10490 5221468d1ea0d89e1cd54d820b01b2a2 156 Gene3D G3DSA:1.20.1290.10 17 141 1.9E-42 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS10490 5221468d1ea0d89e1cd54d820b01b2a2 156 SUPERFAMILY SSF69118 17 138 1.35E-34 T 22-04-2016 IPR029032 AhpD-like RPIC12D_RS10490 5221468d1ea0d89e1cd54d820b01b2a2 156 Pfam PF02627 Carboxymuconolactone decarboxylase family 48 133 1.3E-21 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS10490 5221468d1ea0d89e1cd54d820b01b2a2 156 PANTHER PTHR33570:SF4 17 143 1.7E-40 T 22-04-2016 RPIC12D_RS11685 1ba98d3bc237c891c7de80ac8d748a08 189 Pfam PF13091 PLD-like domain 52 178 1.5E-22 T 22-04-2016 IPR025202 Phospholipase D-like domain RPIC12D_RS11685 1ba98d3bc237c891c7de80ac8d748a08 189 Gene3D G3DSA:3.30.870.10 36 180 5.5E-30 T 22-04-2016 RPIC12D_RS11685 1ba98d3bc237c891c7de80ac8d748a08 189 PANTHER PTHR21248 41 178 7.5E-31 T 22-04-2016 RPIC12D_RS11685 1ba98d3bc237c891c7de80ac8d748a08 189 SUPERFAMILY SSF56024 40 184 2.47E-29 T 22-04-2016 RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 263 273 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 SUPERFAMILY SSF49299 513 606 9.81E-6 T 22-04-2016 IPR000601 PKD domain RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 Gene3D G3DSA:3.40.50.200 113 509 9.0E-68 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 PANTHER PTHR10795 262 413 4.8E-44 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 PANTHER PTHR10795 616 624 4.8E-44 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 PANTHER PTHR10795 435 522 4.8E-44 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 PANTHER PTHR10795 184 246 4.8E-44 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 PANTHER PTHR10795 1 155 4.8E-44 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 PRINTS PR00723 Subtilisin serine protease family (S8) signature 259 272 9.9E-12 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 PRINTS PR00723 Subtilisin serine protease family (S8) signature 190 209 9.9E-12 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 PRINTS PR00723 Subtilisin serine protease family (S8) signature 443 459 9.9E-12 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 195 205 - T 22-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 SUPERFAMILY SSF52743 256 511 3.8E-57 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 SUPERFAMILY SSF52743 176 226 3.8E-57 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 Pfam PF00082 Subtilase family 192 482 4.6E-35 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 444 454 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 PANTHER PTHR10795:SF419 262 413 4.8E-44 T 22-04-2016 RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 PANTHER PTHR10795:SF419 616 624 4.8E-44 T 22-04-2016 RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 PANTHER PTHR10795:SF419 435 522 4.8E-44 T 22-04-2016 RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 PANTHER PTHR10795:SF419 184 246 4.8E-44 T 22-04-2016 RPIC12D_RS12445 205ddb20baa279070b9b298cd9e4b82c 650 PANTHER PTHR10795:SF419 1 155 4.8E-44 T 22-04-2016 RPIC12D_RS10370 9c9ba20293e2fb9f5e601a3bd87d951f 344 PANTHER PTHR30482 24 324 1.4E-81 T 22-04-2016 RPIC12D_RS10370 9c9ba20293e2fb9f5e601a3bd87d951f 344 PANTHER PTHR30482:SF2 24 324 1.4E-81 T 22-04-2016 RPIC12D_RS10370 9c9ba20293e2fb9f5e601a3bd87d951f 344 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 315 5.7E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS07800 7aa7d22601467690efd125dd4c0507d4 250 PIRSF PIRSF015736 1 249 6.7E-59 T 22-04-2016 IPR026286 Maleate isomerase/Arylmalonate decarboxylase RPIC12D_RS07800 7aa7d22601467690efd125dd4c0507d4 250 PANTHER PTHR40267 1 246 1.3E-27 T 22-04-2016 RPIC12D_RS07800 7aa7d22601467690efd125dd4c0507d4 250 Hamap MF_00943 Maleate isomerase [maiA]. 4 250 48.797 T 22-04-2016 IPR028615 Maleate isomerase GO:0050076 KEGG: 00650+5.2.1.1|KEGG: 00760+5.2.1.1|MetaCyc: PWY-5033|MetaCyc: PWY-6993|MetaCyc: PWY-7128|MetaCyc: PWY-722 RPIC12D_RS10530 76b164c7d12cf95ddcce8aefd6e76fd9 161 Gene3D G3DSA:1.10.760.10 58 158 4.7E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS10530 76b164c7d12cf95ddcce8aefd6e76fd9 161 TIGRFAM TIGR04494 c550_PedF: cytochrome c-550 PedF 13 159 7.6E-64 T 22-04-2016 IPR030991 Cytochrome c-550 PedF RPIC12D_RS10530 76b164c7d12cf95ddcce8aefd6e76fd9 161 SUPERFAMILY SSF46626 5 156 7.76E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS10530 76b164c7d12cf95ddcce8aefd6e76fd9 161 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 63 154 5.3E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS16210 5af6728489bce42eb4120e86eb1490f8 274 PANTHER PTHR10672 26 274 1.2E-75 T 22-04-2016 RPIC12D_RS16210 5af6728489bce42eb4120e86eb1490f8 274 SUPERFAMILY SSF53639 24 240 1.59E-58 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS16210 5af6728489bce42eb4120e86eb1490f8 274 Gene3D G3DSA:3.40.225.10 26 242 2.9E-58 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS16210 5af6728489bce42eb4120e86eb1490f8 274 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 32 221 1.0E-42 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS16210 5af6728489bce42eb4120e86eb1490f8 274 SMART SM01007 31 221 1.6E-58 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC12D_RS05295 eb1609b3a67a666235e20c2a68a14a6e 416 Pfam PF12704 MacB-like periplasmic core domain 30 244 2.2E-20 T 22-04-2016 IPR025857 MacB-like periplasmic core domain RPIC12D_RS05295 eb1609b3a67a666235e20c2a68a14a6e 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 6 416 4.3E-147 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 RPIC12D_RS05295 eb1609b3a67a666235e20c2a68a14a6e 416 PANTHER PTHR30489:SF8 9 416 6.9E-100 T 22-04-2016 RPIC12D_RS05295 eb1609b3a67a666235e20c2a68a14a6e 416 PANTHER PTHR30489 9 416 6.9E-100 T 22-04-2016 RPIC12D_RS05295 eb1609b3a67a666235e20c2a68a14a6e 416 Pfam PF02687 FtsX-like permease family 276 409 8.3E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RPIC12D_RS03440 ba64010f5d91bf2bc6f997b5e003ef9a 505 Pfam PF07916 TraG-like protein, N-terminal region 10 487 4.1E-98 T 22-04-2016 IPR012931 TraG-like, N-terminal RPIC12D_RS08115 31f20bd90d4c208a7a3f3edcb60e4777 193 Pfam PF09361 Phasin protein 5 103 6.8E-31 T 22-04-2016 IPR018968 Phasin RPIC12D_RS08115 31f20bd90d4c208a7a3f3edcb60e4777 193 TIGRFAM TIGR01841 phasin: phasin family protein 25 112 7.1E-29 T 22-04-2016 IPR010127 Phasin, subfamily 1 RPIC12D_RS03495 ac03abc1d18667f7a78dda11f408916f 503 Pfam PF00171 Aldehyde dehydrogenase family 34 496 3.3E-171 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS03495 ac03abc1d18667f7a78dda11f408916f 503 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 45 496 2.9E-217 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 RPIC12D_RS03495 ac03abc1d18667f7a78dda11f408916f 503 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 300 311 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS03495 ac03abc1d18667f7a78dda11f408916f 503 Gene3D G3DSA:3.40.605.10 25 286 1.9E-101 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS03495 ac03abc1d18667f7a78dda11f408916f 503 PANTHER PTHR11699:SF49 6 500 9.8E-293 T 22-04-2016 RPIC12D_RS03495 ac03abc1d18667f7a78dda11f408916f 503 SUPERFAMILY SSF53720 17 500 1.31E-174 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS03495 ac03abc1d18667f7a78dda11f408916f 503 Gene3D G3DSA:3.40.309.10 287 473 3.9E-71 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RPIC12D_RS03495 ac03abc1d18667f7a78dda11f408916f 503 PANTHER PTHR11699 6 500 9.8E-293 T 22-04-2016 RPIC12D_RS14025 61ea4773b5060fa40e7b9e420cacb076 103 PIRSF PIRSF005894 1 103 1.4E-49 T 22-04-2016 IPR014434 Monothiol glutaredoxin RPIC12D_RS14025 61ea4773b5060fa40e7b9e420cacb076 103 SUPERFAMILY SSF52833 2 102 2.18E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS14025 61ea4773b5060fa40e7b9e420cacb076 103 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 102 4.8E-46 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related RPIC12D_RS14025 61ea4773b5060fa40e7b9e420cacb076 103 Gene3D G3DSA:3.40.30.10 8 102 3.5E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS14025 61ea4773b5060fa40e7b9e420cacb076 103 PANTHER PTHR10293 2 102 3.5E-65 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related RPIC12D_RS14025 61ea4773b5060fa40e7b9e420cacb076 103 Pfam PF00462 Glutaredoxin 17 82 1.7E-19 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 RPIC12D_RS08700 c5e658b9943d966d189e0c9806fced3e 224 Pfam PF01810 LysE type translocator 22 220 4.5E-48 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS08700 c5e658b9943d966d189e0c9806fced3e 224 PANTHER PTHR30086 9 219 2.4E-88 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS08700 c5e658b9943d966d189e0c9806fced3e 224 PANTHER PTHR30086:SF15 9 219 2.4E-88 T 22-04-2016 RPIC12D_RS08700 c5e658b9943d966d189e0c9806fced3e 224 PIRSF PIRSF006324 8 223 1.2E-54 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC12D_RS24200 fa8ac6ccf2076316c1cffc1547061039 69 PANTHER PTHR30137:SF2 1 69 7.2E-26 T 22-04-2016 RPIC12D_RS24200 fa8ac6ccf2076316c1cffc1547061039 69 PANTHER PTHR30137 1 69 7.2E-26 T 22-04-2016 RPIC12D_RS24200 fa8ac6ccf2076316c1cffc1547061039 69 Pfam PF00296 Luciferase-like monooxygenase 1 69 1.5E-22 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC12D_RS24200 fa8ac6ccf2076316c1cffc1547061039 69 SUPERFAMILY SSF51679 1 69 6.06E-28 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC12D_RS24200 fa8ac6ccf2076316c1cffc1547061039 69 Gene3D G3DSA:3.20.20.30 1 69 3.3E-30 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC12D_RS03855 c56b1739e927cd58940143cfa32576b4 275 PANTHER PTHR30136 1 260 3.2E-64 T 22-04-2016 RPIC12D_RS03855 c56b1739e927cd58940143cfa32576b4 275 PANTHER PTHR30136:SF4 1 260 3.2E-64 T 22-04-2016 RPIC12D_RS03855 c56b1739e927cd58940143cfa32576b4 275 SUPERFAMILY SSF46785 24 97 2.07E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS03855 c56b1739e927cd58940143cfa32576b4 275 SMART SM00346 24 114 1.2E-18 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC12D_RS03855 c56b1739e927cd58940143cfa32576b4 275 Gene3D G3DSA:1.10.10.10 17 94 1.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS03855 c56b1739e927cd58940143cfa32576b4 275 SUPERFAMILY SSF55781 91 269 2.09E-34 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS03855 c56b1739e927cd58940143cfa32576b4 275 Pfam PF09339 IclR helix-turn-helix domain 26 77 3.0E-13 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC12D_RS03855 c56b1739e927cd58940143cfa32576b4 275 Gene3D G3DSA:3.30.450.40 95 269 8.6E-38 T 22-04-2016 IPR029016 GAF domain-like RPIC12D_RS03855 c56b1739e927cd58940143cfa32576b4 275 Pfam PF01614 Bacterial transcriptional regulator 149 267 1.2E-12 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RPIC12D_RS16905 5ce7d9f2642f4f951b0d090f84c700d2 320 Gene3D G3DSA:3.40.50.1820 69 316 1.6E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS16905 5ce7d9f2642f4f951b0d090f84c700d2 320 SUPERFAMILY SSF53474 69 316 1.93E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS16905 5ce7d9f2642f4f951b0d090f84c700d2 320 Pfam PF01738 Dienelactone hydrolase family 78 315 2.9E-16 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 RPIC12D_RS02570 db54e16b1cce8b65ee962c8bbae5b556 222 Gene3D G3DSA:3.40.50.10610 25 209 8.3E-16 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RPIC12D_RS02570 db54e16b1cce8b65ee962c8bbae5b556 222 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 37 205 1.2E-27 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RPIC12D_RS02570 db54e16b1cce8b65ee962c8bbae5b556 222 SUPERFAMILY SSF159594 34 211 1.2E-21 T 22-04-2016 RPIC12D_RS04580 2c5d7d19ff006fdeb348a0490ecb5db0 312 PANTHER PTHR12715:SF9 17 307 7.2E-73 T 22-04-2016 RPIC12D_RS04580 2c5d7d19ff006fdeb348a0490ecb5db0 312 SUPERFAMILY SSF103481 60 148 3.4E-9 T 22-04-2016 RPIC12D_RS04580 2c5d7d19ff006fdeb348a0490ecb5db0 312 Pfam PF00892 EamA-like transporter family 165 302 2.0E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS04580 2c5d7d19ff006fdeb348a0490ecb5db0 312 Pfam PF00892 EamA-like transporter family 18 145 5.5E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS04580 2c5d7d19ff006fdeb348a0490ecb5db0 312 SUPERFAMILY SSF103481 199 304 3.01E-11 T 22-04-2016 RPIC12D_RS04580 2c5d7d19ff006fdeb348a0490ecb5db0 312 PANTHER PTHR12715 17 307 7.2E-73 T 22-04-2016 RPIC12D_RS00390 92229630afed10a3eea89df8efa4d92a 402 PANTHER PTHR11751:SF294 15 398 3.3E-115 T 22-04-2016 RPIC12D_RS00390 92229630afed10a3eea89df8efa4d92a 402 PANTHER PTHR11751 15 398 3.3E-115 T 22-04-2016 RPIC12D_RS00390 92229630afed10a3eea89df8efa4d92a 402 SUPERFAMILY SSF53383 6 398 3.06E-106 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC12D_RS00390 92229630afed10a3eea89df8efa4d92a 402 Pfam PF00155 Aminotransferase class I and II 51 392 2.4E-41 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC12D_RS00390 92229630afed10a3eea89df8efa4d92a 402 Gene3D G3DSA:3.90.1150.10 282 398 2.1E-11 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC12D_RS00390 92229630afed10a3eea89df8efa4d92a 402 Gene3D G3DSA:3.40.640.10 59 281 5.7E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC12D_RS07960 e9b7444b3f866b8674840135958e2a85 184 Pfam PF05233 PHB accumulation regulatory domain 126 165 1.9E-17 T 22-04-2016 IPR007897 PHB accumulation regulatory RPIC12D_RS07960 e9b7444b3f866b8674840135958e2a85 184 Pfam PF05233 PHB accumulation regulatory domain 75 113 1.4E-18 T 22-04-2016 IPR007897 PHB accumulation regulatory RPIC12D_RS07960 e9b7444b3f866b8674840135958e2a85 184 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 10 115 2.3E-46 T 22-04-2016 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR RPIC12D_RS07960 e9b7444b3f866b8674840135958e2a85 184 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 11 70 7.5E-32 T 22-04-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal RPIC12D_RS16945 c48a0ac1436073ce776aad23580484f6 175 Pfam PF01475 Ferric uptake regulator family 30 122 9.2E-10 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 RPIC12D_RS16945 c48a0ac1436073ce776aad23580484f6 175 Gene3D G3DSA:1.10.10.10 21 98 5.6E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS16945 c48a0ac1436073ce776aad23580484f6 175 PANTHER PTHR33202 19 160 2.8E-14 T 22-04-2016 RPIC12D_RS16945 c48a0ac1436073ce776aad23580484f6 175 SUPERFAMILY SSF46785 21 158 3.41E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC12D_RS14105 107e6d76a7d33b72c73b1d3eb6747608 102 Pfam PF04966 Carbohydrate-selective porin, OprB family 1 102 4.0E-22 T 22-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS10675 9ab0b47e7c31b1c23850ddc1121cbfc8 202 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 23 55 5.1E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RPIC12D_RS11420 e4fa34c590c3b7efe03488d707a8c44c 173 Pfam PF07105 Protein of unknown function (DUF1367) 88 141 3.0E-6 T 22-04-2016 IPR009797 Protein of unknown function DUF1367 RPIC12D_RS08525 6a5994bdb3760ecfdc4589ddfdbcd5f9 91 SUPERFAMILY SSF55073 3 71 4.79E-9 T 22-04-2016 IPR029787 Nucleotide cyclase RPIC12D_RS08525 6a5994bdb3760ecfdc4589ddfdbcd5f9 91 Pfam PF00990 Diguanylate cyclase, GGDEF domain 11 66 6.0E-5 T 22-04-2016 IPR000160 GGDEF domain RPIC12D_RS08525 6a5994bdb3760ecfdc4589ddfdbcd5f9 91 Gene3D G3DSA:3.30.70.270 3 73 2.4E-10 T 22-04-2016 RPIC12D_RS12995 3b3688eac9f5112876ca59a94af44aeb 578 Pfam PF00920 Dehydratase family 41 560 1.4E-174 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS12995 3b3688eac9f5112876ca59a94af44aeb 578 PANTHER PTHR21000:SF14 3 578 5.5E-273 T 22-04-2016 RPIC12D_RS12995 3b3688eac9f5112876ca59a94af44aeb 578 SUPERFAMILY SSF52016 379 565 5.26E-56 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RPIC12D_RS12995 3b3688eac9f5112876ca59a94af44aeb 578 PANTHER PTHR21000 3 578 5.5E-273 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS12995 3b3688eac9f5112876ca59a94af44aeb 578 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 124 134 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC12D_RS12995 3b3688eac9f5112876ca59a94af44aeb 578 SUPERFAMILY SSF143975 5 378 7.19E-124 T 22-04-2016 RPIC12D_RS16660 80f114add7a5d6e58490b510ddbd9d36 797 Pfam PF11678 Protein of unknown function (DUF3274) 665 721 3.2E-5 T 22-04-2016 IPR021692 Protein of unknown function DUF3274 RPIC12D_RS15045 f99fa719e2bbfde123767391f1ad12ce 254 Pfam PF16357 Putative PepSY_TM-like 37 250 1.5E-14 T 22-04-2016 IPR032307 Putative PepSY TM-like protein RPIC12D_RS12530 12a68c5caae679066cc0522605c18abf 159 Pfam PF07883 Cupin domain 49 117 3.2E-18 T 22-04-2016 IPR013096 Cupin 2, conserved barrel RPIC12D_RS12530 12a68c5caae679066cc0522605c18abf 159 PANTHER PTHR35848 35 158 1.2E-17 T 22-04-2016 RPIC12D_RS12530 12a68c5caae679066cc0522605c18abf 159 SUPERFAMILY SSF51182 6 147 1.75E-27 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS12530 12a68c5caae679066cc0522605c18abf 159 Gene3D G3DSA:2.60.120.10 29 117 1.9E-25 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS12985 5965da6bf6d258a844504c21fb8af9cc 199 Gene3D G3DSA:1.10.10.690 78 198 1.1E-23 T 22-04-2016 IPR027405 YidB-like RPIC12D_RS12985 5965da6bf6d258a844504c21fb8af9cc 199 SUPERFAMILY SSF140804 90 197 6.93E-21 T 22-04-2016 IPR027405 YidB-like RPIC12D_RS12985 5965da6bf6d258a844504c21fb8af9cc 199 Pfam PF06078 Bacterial protein of unknown function (DUF937) 47 193 2.8E-10 T 22-04-2016 IPR009282 Protein of unknown function DUF937 RPIC12D_RS15730 c6ed3fd253f70673f86f727d26ca1966 239 Gene3D G3DSA:3.30.420.10 39 225 7.3E-11 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS15730 c6ed3fd253f70673f86f727d26ca1966 239 SUPERFAMILY SSF53098 39 222 7.59E-25 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS02970 eccc924cf094d7874a8d9ff6860a2c58 197 PANTHER PTHR30576 1 196 5.3E-81 T 22-04-2016 RPIC12D_RS02970 eccc924cf094d7874a8d9ff6860a2c58 197 Pfam PF02397 Bacterial sugar transferase 3 196 5.3E-54 T 22-04-2016 IPR003362 Bacterial sugar transferase RPIC12D_RS03845 069c9c1be19eea827523b28a13f1cb09 460 PANTHER PTHR11119:SF43 22 455 9.5E-228 T 22-04-2016 RPIC12D_RS03845 069c9c1be19eea827523b28a13f1cb09 460 PANTHER PTHR11119 22 455 9.5E-228 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC12D_RS03845 069c9c1be19eea827523b28a13f1cb09 460 Pfam PF00860 Permease family 39 420 3.7E-69 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC12D_RS09045 0d942cd745443e50ad00b1516de5175d 93 Pfam PF10636 Hemin uptake protein hemP 58 93 1.2E-17 T 22-04-2016 IPR019600 Hemin uptake protein HemP RPIC12D_RS09045 0d942cd745443e50ad00b1516de5175d 93 Gene3D G3DSA:2.10.70.10 55 93 5.0E-20 T 22-04-2016 RPIC12D_RS13390 a5eb473be7b8d28a337a5f695affb024 147 Gene3D G3DSA:1.10.443.10 5 124 1.0E-7 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC12D_RS13390 a5eb473be7b8d28a337a5f695affb024 147 SUPERFAMILY SSF56349 5 127 8.54E-8 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC12D_RS07160 70869f31220edf8003bbaabce8855a54 452 Gene3D G3DSA:3.90.380.10 149 448 2.7E-87 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RPIC12D_RS07160 70869f31220edf8003bbaabce8855a54 452 SUPERFAMILY SSF55961 171 447 6.36E-65 T 22-04-2016 RPIC12D_RS07160 70869f31220edf8003bbaabce8855a54 452 Pfam PF00355 Rieske [2Fe-2S] domain 52 136 5.2E-21 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC12D_RS07160 70869f31220edf8003bbaabce8855a54 452 PANTHER PTHR21266 1 382 1.0E-112 T 22-04-2016 RPIC12D_RS07160 70869f31220edf8003bbaabce8855a54 452 PANTHER PTHR21266:SF30 1 382 1.0E-112 T 22-04-2016 RPIC12D_RS07160 70869f31220edf8003bbaabce8855a54 452 SUPERFAMILY SSF50022 19 170 3.27E-44 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC12D_RS07160 70869f31220edf8003bbaabce8855a54 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 88 108 9.0E-45 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RPIC12D_RS07160 70869f31220edf8003bbaabce8855a54 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 37 62 9.0E-45 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RPIC12D_RS07160 70869f31220edf8003bbaabce8855a54 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 109 129 9.0E-45 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RPIC12D_RS07160 70869f31220edf8003bbaabce8855a54 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 67 82 9.0E-45 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RPIC12D_RS07160 70869f31220edf8003bbaabce8855a54 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 155 181 9.0E-45 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RPIC12D_RS07160 70869f31220edf8003bbaabce8855a54 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 196 218 9.0E-45 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RPIC12D_RS07160 70869f31220edf8003bbaabce8855a54 452 Gene3D G3DSA:2.102.10.10 52 142 4.8E-24 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC12D_RS07160 70869f31220edf8003bbaabce8855a54 452 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 203 411 1.3E-19 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RPIC12D_RS12935 4231bf8dac5d9393994c661da0be5644 294 PANTHER PTHR10091:SF5 3 292 1.4E-24 T 22-04-2016 RPIC12D_RS12935 4231bf8dac5d9393994c661da0be5644 294 PANTHER PTHR10091 3 292 1.4E-24 T 22-04-2016 RPIC12D_RS12935 4231bf8dac5d9393994c661da0be5644 294 Pfam PF01263 Aldose 1-epimerase 3 282 4.0E-31 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RPIC12D_RS12935 4231bf8dac5d9393994c661da0be5644 294 Gene3D G3DSA:2.70.98.10 4 289 9.7E-20 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 RPIC12D_RS12935 4231bf8dac5d9393994c661da0be5644 294 SUPERFAMILY SSF74650 3 289 1.88E-49 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RPIC12D_RS16585 e9a5ac2eb79e738ae7a761a254f1fc10 191 Pfam PF05488 PAAR motif 8 78 7.7E-8 T 22-04-2016 IPR008727 PAAR motif RPIC12D_RS12880 16cf69786e9ed92d9ea7d5ce8503fc7c 174 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 14 172 26.115 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 RPIC12D_RS12880 16cf69786e9ed92d9ea7d5ce8503fc7c 174 PANTHER PTHR38098 10 173 1.7E-16 T 22-04-2016 RPIC12D_RS12880 16cf69786e9ed92d9ea7d5ce8503fc7c 174 Pfam PF04390 Lipopolysaccharide-assembly 21 167 1.7E-21 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 RPIC12D_RS12880 16cf69786e9ed92d9ea7d5ce8503fc7c 174 PANTHER PTHR38098:SF1 10 173 1.7E-16 T 22-04-2016 RPIC12D_RS12880 16cf69786e9ed92d9ea7d5ce8503fc7c 174 Gene3D G3DSA:3.30.160.150 29 172 5.0E-44 T 22-04-2016 RPIC12D_RS01755 631974db7c5d26c43e4e52373bfcbe91 479 Pfam PF00474 Sodium:solute symporter family 30 426 5.1E-37 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC12D_RS01755 631974db7c5d26c43e4e52373bfcbe91 479 PANTHER PTHR11819:SF141 1 461 5.8E-100 T 22-04-2016 RPIC12D_RS01755 631974db7c5d26c43e4e52373bfcbe91 479 PANTHER PTHR11819 1 461 5.8E-100 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC12D_RS11440 59216835c0e6b1c5837f13d143e6cc0c 99 SUPERFAMILY SSF52980 21 87 3.54E-5 T 22-04-2016 IPR011335 Restriction endonuclease type II-like RPIC12D_RS08445 1784b32b0b1ca3e6a9248731fc15a444 91 Pfam PF05488 PAAR motif 8 84 1.8E-18 T 22-04-2016 IPR008727 PAAR motif RPIC12D_RS06295 c989210172641727f68797e2985faa0b 154 Gene3D G3DSA:3.40.30.10 2 154 2.4E-46 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS06295 c989210172641727f68797e2985faa0b 154 PANTHER PTHR10681 3 154 2.7E-41 T 22-04-2016 RPIC12D_RS06295 c989210172641727f68797e2985faa0b 154 SUPERFAMILY SSF52833 3 154 3.19E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS06295 c989210172641727f68797e2985faa0b 154 PIRSF PIRSF000239 1 154 1.3E-27 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 RPIC12D_RS06295 c989210172641727f68797e2985faa0b 154 Pfam PF00578 AhpC/TSA family 5 133 6.0E-32 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RPIC12D_RS02490 03d14e2228a08ed4f68eaa2cc32e42c9 225 Pfam PF11010 Protein of unknown function (DUF2848) 24 216 5.6E-79 T 22-04-2016 IPR021269 Protein of unknown function DUF2848 RPIC12D_RS02490 03d14e2228a08ed4f68eaa2cc32e42c9 225 SUPERFAMILY SSF56529 36 201 3.66E-10 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC12D_RS05395 c14686c983ea3edff7eaa4423be8417c 181 Pfam PF13761 Domain of unknown function (DUF4166) 18 173 7.1E-38 T 22-04-2016 IPR025311 Domain of unknown function DUF4166 RPIC12D_RS03885 46a97b053a97a9e091fcc38ab9ae825f 192 PANTHER PTHR30466 1 189 3.4E-35 T 22-04-2016 RPIC12D_RS03885 46a97b053a97a9e091fcc38ab9ae825f 192 Gene3D G3DSA:2.30.110.10 24 185 3.2E-56 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RPIC12D_RS03885 46a97b053a97a9e091fcc38ab9ae825f 192 PANTHER PTHR30466:SF1 1 189 3.4E-35 T 22-04-2016 RPIC12D_RS03885 46a97b053a97a9e091fcc38ab9ae825f 192 SUPERFAMILY SSF50475 28 185 4.76E-46 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RPIC12D_RS03885 46a97b053a97a9e091fcc38ab9ae825f 192 Pfam PF01613 Flavin reductase like domain 38 187 2.9E-35 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RPIC12D_RS03885 46a97b053a97a9e091fcc38ab9ae825f 192 SMART SM00903 37 186 3.2E-60 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RPIC12D_RS00885 69db4af9feeef6775398836d623b37f8 421 Pfam PF04892 VanZ like family 59 164 2.1E-10 T 22-04-2016 IPR006976 VanZ-like RPIC12D_RS08985 7c4498d66e553c65bdb8011bffccc0dd 58 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 20 52 2.0E-8 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 RPIC12D_RS07355 602ac3468f52dfe821731466f4174cf0 205 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 197 3.1E-48 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 RPIC12D_RS07355 602ac3468f52dfe821731466f4174cf0 205 Pfam PF02223 Thymidylate kinase 8 197 4.1E-44 T 22-04-2016 RPIC12D_RS07355 602ac3468f52dfe821731466f4174cf0 205 PANTHER PTHR10344 1 202 1.5E-55 T 22-04-2016 RPIC12D_RS07355 602ac3468f52dfe821731466f4174cf0 205 PANTHER PTHR10344:SF0 1 202 1.5E-55 T 22-04-2016 RPIC12D_RS07355 602ac3468f52dfe821731466f4174cf0 205 SUPERFAMILY SSF52540 1 201 2.71E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS07355 602ac3468f52dfe821731466f4174cf0 205 Hamap MF_00165 Thymidylate kinase [tmk]. 4 205 27.487 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 RPIC12D_RS07355 602ac3468f52dfe821731466f4174cf0 205 Gene3D G3DSA:3.40.50.300 2 203 1.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS12705 cc3bdd1ee5fcc00458abcd7b61c346b4 498 Pfam PF04966 Carbohydrate-selective porin, OprB family 115 498 5.7E-67 T 22-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS06920 42832bef3866ea4b41316e5267cf50eb 257 Pfam PF09948 Predicted metal-binding integral membrane protein (DUF2182) 70 249 1.9E-46 T 22-04-2016 IPR018688 Protein of unknown function DUF2182, transmembrane, metal-binding RPIC12D_RS01250 f29ec9e076d0c3919b1a10086f3e09ad 336 Gene3D G3DSA:1.20.970.10 26 90 1.7E-16 T 22-04-2016 RPIC12D_RS01250 f29ec9e076d0c3919b1a10086f3e09ad 336 SUPERFAMILY SSF47648 27 93 1.13E-14 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RPIC12D_RS01250 f29ec9e076d0c3919b1a10086f3e09ad 336 SUPERFAMILY SSF52418 98 329 7.38E-42 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RPIC12D_RS01250 f29ec9e076d0c3919b1a10086f3e09ad 336 Gene3D G3DSA:3.40.1030.10 103 326 3.2E-26 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RPIC12D_RS01250 f29ec9e076d0c3919b1a10086f3e09ad 336 Pfam PF02885 Glycosyl transferase family, helical bundle domain 35 86 2.4E-11 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RPIC12D_RS15690 8cf9f731364d04031dca61e1539eadf5 295 SUPERFAMILY SSF103481 200 287 1.44E-9 T 22-04-2016 RPIC12D_RS15690 8cf9f731364d04031dca61e1539eadf5 295 PANTHER PTHR32322:SF9 3 295 3.5E-88 T 22-04-2016 RPIC12D_RS15690 8cf9f731364d04031dca61e1539eadf5 295 Pfam PF00892 EamA-like transporter family 145 283 1.1E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS15690 8cf9f731364d04031dca61e1539eadf5 295 Pfam PF00892 EamA-like transporter family 6 130 1.6E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS15690 8cf9f731364d04031dca61e1539eadf5 295 PANTHER PTHR32322 3 295 3.5E-88 T 22-04-2016 RPIC12D_RS15690 8cf9f731364d04031dca61e1539eadf5 295 SUPERFAMILY SSF103481 42 134 2.35E-9 T 22-04-2016 RPIC12D_RS02575 8981e2be68161ba23125ee8149f5b389 547 Pfam PF02470 MlaD protein 49 139 3.1E-10 T 22-04-2016 IPR003399 Mce/MlaD RPIC12D_RS02575 8981e2be68161ba23125ee8149f5b389 547 Pfam PF02470 MlaD protein 164 224 2.2E-9 T 22-04-2016 IPR003399 Mce/MlaD RPIC12D_RS02575 8981e2be68161ba23125ee8149f5b389 547 Pfam PF02470 MlaD protein 292 396 1.9E-17 T 22-04-2016 IPR003399 Mce/MlaD RPIC12D_RS02575 8981e2be68161ba23125ee8149f5b389 547 PANTHER PTHR30462 1 324 3.6E-83 T 22-04-2016 RPIC12D_RS02575 8981e2be68161ba23125ee8149f5b389 547 PANTHER PTHR30462:SF0 1 324 3.6E-83 T 22-04-2016 RPIC12D_RS07055 2ad394f32e171b37fa2955b356cb2c9d 408 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 15 397 1.3E-84 T 22-04-2016 IPR018721 Protein of unknown function DUF2252 RPIC12D_RS07055 2ad394f32e171b37fa2955b356cb2c9d 408 PANTHER PTHR39441 3 295 1.9E-32 T 22-04-2016 RPIC12D_RS07055 2ad394f32e171b37fa2955b356cb2c9d 408 Gene3D G3DSA:3.90.1200.10 50 171 4.5E-6 T 22-04-2016 RPIC12D_RS07055 2ad394f32e171b37fa2955b356cb2c9d 408 SUPERFAMILY SSF56112 19 162 3.88E-6 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC12D_RS09070 d087b6f51ac700981517f5843204c4a3 169 TIGRFAM TIGR01841 phasin: phasin family protein 25 111 4.4E-25 T 22-04-2016 IPR010127 Phasin, subfamily 1 RPIC12D_RS09070 d087b6f51ac700981517f5843204c4a3 169 Pfam PF09361 Phasin protein 5 102 1.1E-16 T 22-04-2016 IPR018968 Phasin RPIC12D_RS08870 8b86c9aa9d567bdac5797139b08f5ae7 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 308 2.8E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS08870 8b86c9aa9d567bdac5797139b08f5ae7 309 SUPERFAMILY SSF161098 100 296 2.35E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS08870 8b86c9aa9d567bdac5797139b08f5ae7 309 Gene3D G3DSA:1.10.3720.10 100 305 9.6E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS08870 8b86c9aa9d567bdac5797139b08f5ae7 309 PANTHER PTHR30465 15 309 2.4E-100 T 22-04-2016 RPIC12D_RS08870 8b86c9aa9d567bdac5797139b08f5ae7 309 PANTHER PTHR30465:SF2 15 309 2.4E-100 T 22-04-2016 RPIC12D_RS08870 8b86c9aa9d567bdac5797139b08f5ae7 309 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 21 76 4.1E-11 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RPIC12D_RS01210 b94312cbeb290aafa701e5a7341eab96 218 Gene3D G3DSA:3.40.30.10 72 213 7.6E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS01210 b94312cbeb290aafa701e5a7341eab96 218 SUPERFAMILY SSF52833 76 213 5.14E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS08750 1f418d392a0cffb83c1d62e8a0a82e62 222 ProDom PD104924 XAC1607 AF0417 13 186 4.0E-83 T 22-04-2016 RPIC12D_RS08750 1f418d392a0cffb83c1d62e8a0a82e62 222 Pfam PF11655 Protein of unknown function (DUF2589) 14 176 7.5E-39 T 22-04-2016 IPR024510 Protein of unknown function DUF2589 RPIC12D_RS08750 1f418d392a0cffb83c1d62e8a0a82e62 222 Gene3D G3DSA:2.60.120.240 95 157 8.6E-4 T 22-04-2016 IPR027439 Protective antigen, heptamerisation domain GO:0051260 RPIC12D_RS06785 2bc1dbb234ae5b793c5677bfe8a59c48 183 PANTHER PTHR35089:SF1 19 183 2.9E-36 T 22-04-2016 RPIC12D_RS06785 2bc1dbb234ae5b793c5677bfe8a59c48 183 Gene3D G3DSA:3.30.910.20 113 178 7.5E-34 T 22-04-2016 RPIC12D_RS06785 2bc1dbb234ae5b793c5677bfe8a59c48 183 Gene3D G3DSA:3.30.910.20 28 75 7.5E-34 T 22-04-2016 RPIC12D_RS06785 2bc1dbb234ae5b793c5677bfe8a59c48 183 PANTHER PTHR35089 19 183 2.9E-36 T 22-04-2016 RPIC12D_RS06785 2bc1dbb234ae5b793c5677bfe8a59c48 183 PIRSF PIRSF002094 13 181 3.2E-50 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 RPIC12D_RS06785 2bc1dbb234ae5b793c5677bfe8a59c48 183 SMART SM00935 26 178 3.1E-59 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 RPIC12D_RS06785 2bc1dbb234ae5b793c5677bfe8a59c48 183 Pfam PF03938 Outer membrane protein (OmpH-like) 25 177 2.2E-36 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 RPIC12D_RS06785 2bc1dbb234ae5b793c5677bfe8a59c48 183 SUPERFAMILY SSF111384 37 178 2.62E-36 T 22-04-2016 IPR024930 Skp domain RPIC12D_RS15630 b82bdc67b922966a13f9985382e01afa 86 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 27 77 8.6E-19 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) RPIC12D_RS16540 32a55af556b05bc54bd56a5eff74d663 287 PANTHER PTHR32322 1 287 3.4E-33 T 22-04-2016 RPIC12D_RS16540 32a55af556b05bc54bd56a5eff74d663 287 SUPERFAMILY SSF103481 189 284 7.45E-14 T 22-04-2016 RPIC12D_RS16540 32a55af556b05bc54bd56a5eff74d663 287 SUPERFAMILY SSF103481 44 140 1.57E-6 T 22-04-2016 RPIC12D_RS16540 32a55af556b05bc54bd56a5eff74d663 287 Pfam PF00892 EamA-like transporter family 150 283 7.2E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC12D_RS07395 7caf98a81045300a4578a6ac153612b8 149 PIRSF PIRSF003230 2 145 6.2E-24 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RPIC12D_RS07395 7caf98a81045300a4578a6ac153612b8 149 PANTHER PTHR31793 1 143 6.9E-26 T 22-04-2016 RPIC12D_RS07395 7caf98a81045300a4578a6ac153612b8 149 SUPERFAMILY SSF54637 2 142 5.34E-39 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS07395 7caf98a81045300a4578a6ac153612b8 149 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 11 122 5.8E-30 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RPIC12D_RS07395 7caf98a81045300a4578a6ac153612b8 149 Pfam PF03061 Thioesterase superfamily 22 108 1.7E-17 T 22-04-2016 IPR006683 Thioesterase domain RPIC12D_RS07395 7caf98a81045300a4578a6ac153612b8 149 Gene3D G3DSA:3.10.129.10 3 143 9.1E-44 T 22-04-2016 IPR029069 HotDog domain RPIC12D_RS07395 7caf98a81045300a4578a6ac153612b8 149 PANTHER PTHR31793:SF9 1 143 6.9E-26 T 22-04-2016 RPIC12D_RS03085 d6f62e18a6788d7832d9be9e9b0f9a2a 203 Pfam PF03729 Short repeat of unknown function (DUF308) 88 161 1.1E-8 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane RPIC12D_RS03085 d6f62e18a6788d7832d9be9e9b0f9a2a 203 Pfam PF03729 Short repeat of unknown function (DUF308) 30 101 3.6E-13 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane RPIC12D_RS09340 aa17b79ce84e0f6b41c80989dc6693c7 219 Pfam PF04191 Phospholipid methyltransferase 105 204 4.0E-15 T 22-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 RPIC12D_RS09340 aa17b79ce84e0f6b41c80989dc6693c7 219 PANTHER PTHR12714 76 219 2.9E-25 T 22-04-2016 RPIC12D_RS01460 97e669f5a14e602f9d2c34f4b170d449 210 PANTHER PTHR37481:SF1 16 208 1.6E-22 T 22-04-2016 RPIC12D_RS01460 97e669f5a14e602f9d2c34f4b170d449 210 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 24 203 3.1E-45 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related RPIC12D_RS01460 97e669f5a14e602f9d2c34f4b170d449 210 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 20 202 7.8E-49 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 RPIC12D_RS01460 97e669f5a14e602f9d2c34f4b170d449 210 PANTHER PTHR37481 16 208 1.6E-22 T 22-04-2016 RPIC12D_RS11735 b1dba898feb7c4a5e1ef56c9745698c9 348 Gene3D G3DSA:3.20.20.30 7 331 9.8E-79 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC12D_RS11735 b1dba898feb7c4a5e1ef56c9745698c9 348 SUPERFAMILY SSF51679 6 331 6.01E-71 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC12D_RS11735 b1dba898feb7c4a5e1ef56c9745698c9 348 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 8 332 1.1E-116 T 22-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 RPIC12D_RS11735 b1dba898feb7c4a5e1ef56c9745698c9 348 PANTHER PTHR30137 1 348 3.7E-109 T 22-04-2016 RPIC12D_RS11735 b1dba898feb7c4a5e1ef56c9745698c9 348 PANTHER PTHR30137:SF7 1 348 3.7E-109 T 22-04-2016 RPIC12D_RS11735 b1dba898feb7c4a5e1ef56c9745698c9 348 Pfam PF00296 Luciferase-like monooxygenase 21 304 1.5E-29 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC12D_RS00100 53f2a011da466a3452e24c0eddb6465c 521 Gene3D G3DSA:2.130.10.10 177 273 7.7E-16 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RPIC12D_RS00100 53f2a011da466a3452e24c0eddb6465c 521 Gene3D G3DSA:2.130.10.10 274 518 9.3E-42 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RPIC12D_RS00100 53f2a011da466a3452e24c0eddb6465c 521 PANTHER PTHR30344:SF1 194 476 1.5E-28 T 22-04-2016 RPIC12D_RS00100 53f2a011da466a3452e24c0eddb6465c 521 PANTHER PTHR30344 194 476 1.5E-28 T 22-04-2016 RPIC12D_RS00100 53f2a011da466a3452e24c0eddb6465c 521 Pfam PF10282 Lactonase, 7-bladed beta-propeller 421 503 4.4E-14 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 RPIC12D_RS00100 53f2a011da466a3452e24c0eddb6465c 521 Pfam PF10282 Lactonase, 7-bladed beta-propeller 194 304 5.1E-15 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 RPIC12D_RS00100 53f2a011da466a3452e24c0eddb6465c 521 SUPERFAMILY SSF51004 181 501 4.45E-46 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain RPIC12D_RS10075 34a8219704f6d880d073730d04261566 494 Gene3D G3DSA:3.40.605.10 14 276 2.3E-83 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS10075 34a8219704f6d880d073730d04261566 494 PANTHER PTHR11699 2 494 7.6E-238 T 22-04-2016 RPIC12D_RS10075 34a8219704f6d880d073730d04261566 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS10075 34a8219704f6d880d073730d04261566 494 PANTHER PTHR11699:SF155 2 494 7.6E-238 T 22-04-2016 RPIC12D_RS10075 34a8219704f6d880d073730d04261566 494 Pfam PF00171 Aldehyde dehydrogenase family 30 482 8.0E-148 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS10075 34a8219704f6d880d073730d04261566 494 Gene3D G3DSA:3.40.309.10 277 459 5.5E-62 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RPIC12D_RS10075 34a8219704f6d880d073730d04261566 494 SUPERFAMILY SSF53720 12 490 1.07E-150 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC12D_RS03195 c12384f7d90a0b12b77cbce4cab550c8 183 Pfam PF11358 Protein of unknown function (DUF3158) 15 167 1.1E-75 T 22-04-2016 IPR021502 Protein of unknown function DUF3158 RPIC12D_RS06810 ba02b94ea59d141fef7c748cf0801935 232 Gene3D G3DSA:3.30.420.10 27 170 2.4E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS06810 ba02b94ea59d141fef7c748cf0801935 232 PANTHER PTHR10954 13 232 2.8E-76 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 RPIC12D_RS06810 ba02b94ea59d141fef7c748cf0801935 232 SUPERFAMILY SSF53098 25 217 4.1E-67 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC12D_RS06810 ba02b94ea59d141fef7c748cf0801935 232 Hamap MF_00052_B Ribonuclease HII [rnhB]. 27 209 36.443 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 RPIC12D_RS06810 ba02b94ea59d141fef7c748cf0801935 232 Pfam PF01351 Ribonuclease HII 29 208 6.8E-37 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain RPIC12D_RS02595 611ba93119ff26991384cc83bad3b2c4 287 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 9 286 3.0E-129 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 RPIC12D_RS02595 611ba93119ff26991384cc83bad3b2c4 287 SUPERFAMILY SSF53474 8 286 6.23E-84 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS02595 611ba93119ff26991384cc83bad3b2c4 287 PANTHER PTHR10061 7 287 3.6E-154 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 RPIC12D_RS02595 611ba93119ff26991384cc83bad3b2c4 287 Gene3D G3DSA:3.40.50.1820 8 286 2.0E-76 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS02595 611ba93119ff26991384cc83bad3b2c4 287 Pfam PF00756 Putative esterase 28 279 1.9E-50 T 22-04-2016 IPR000801 Putative esterase RPIC12D_RS11385 039286d28f61a1dd34dafe0ce7d29707 447 TIGRFAM TIGR01555 phge_rel_HI1409: phage-associated protein, HI1409 family 13 412 1.5E-79 T 22-04-2016 IPR006445 Phage-associated protein HI1409 RPIC12D_RS11385 039286d28f61a1dd34dafe0ce7d29707 447 Pfam PF06381 Protein of unknown function (DUF1073) 37 390 2.7E-118 T 22-04-2016 IPR024459 Protein of unknown function DUF1073 RPIC12D_RS14095 853f43c005e3962ebbbb38175a1077c3 547 PANTHER PTHR11706:SF33 3 26 2.3E-15 T 22-04-2016 RPIC12D_RS14095 853f43c005e3962ebbbb38175a1077c3 547 PANTHER PTHR11706:SF33 43 327 2.3E-15 T 22-04-2016 RPIC12D_RS14095 853f43c005e3962ebbbb38175a1077c3 547 Pfam PF01566 Natural resistance-associated macrophage protein 71 425 3.0E-85 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RPIC12D_RS14095 853f43c005e3962ebbbb38175a1077c3 547 PANTHER PTHR11706 3 26 2.3E-15 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RPIC12D_RS14095 853f43c005e3962ebbbb38175a1077c3 547 PANTHER PTHR11706 43 327 2.3E-15 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RPIC12D_RS12770 854279cce13c0cadf4b47553ccafd351 323 Gene3D G3DSA:1.20.1640.10 127 306 3.3E-27 T 22-04-2016 RPIC12D_RS12770 854279cce13c0cadf4b47553ccafd351 323 Pfam PF02355 Protein export membrane protein 112 296 1.3E-63 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RPIC12D_RS12770 854279cce13c0cadf4b47553ccafd351 323 Pfam PF07549 SecD/SecF GG Motif 32 59 2.7E-8 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RPIC12D_RS12770 854279cce13c0cadf4b47553ccafd351 323 SUPERFAMILY SSF82866 71 299 1.44E-39 T 22-04-2016 RPIC12D_RS12770 854279cce13c0cadf4b47553ccafd351 323 PRINTS PR01755 Bacterial translocase SecF protein signature 236 251 6.3E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RPIC12D_RS12770 854279cce13c0cadf4b47553ccafd351 323 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 6.3E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RPIC12D_RS12770 854279cce13c0cadf4b47553ccafd351 323 PRINTS PR01755 Bacterial translocase SecF protein signature 204 222 6.3E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RPIC12D_RS12770 854279cce13c0cadf4b47553ccafd351 323 PRINTS PR01755 Bacterial translocase SecF protein signature 156 170 6.3E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RPIC12D_RS12770 854279cce13c0cadf4b47553ccafd351 323 PANTHER PTHR30081 7 318 3.1E-74 T 22-04-2016 RPIC12D_RS12770 854279cce13c0cadf4b47553ccafd351 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 288 8.9E-72 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RPIC12D_RS12770 854279cce13c0cadf4b47553ccafd351 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 299 28.45 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RPIC12D_RS12770 854279cce13c0cadf4b47553ccafd351 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 106 285 4.9E-48 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RPIC12D_RS07580 4a7c9be21ed0d0dff46941605b760dfc 217 Pfam PF11745 Protein of unknown function (DUF3304) 17 147 5.7E-28 T 22-04-2016 IPR021733 Protein of unknown function DUF3304 RPIC12D_RS16070 976cf98c6546b6b6df07e4e43c0a5c1d 125 SUPERFAMILY SSF51182 6 112 7.36E-24 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS16070 976cf98c6546b6b6df07e4e43c0a5c1d 125 PANTHER PTHR36114 12 121 6.2E-19 T 22-04-2016 RPIC12D_RS16070 976cf98c6546b6b6df07e4e43c0a5c1d 125 Gene3D G3DSA:2.60.120.10 7 109 1.5E-35 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS16070 976cf98c6546b6b6df07e4e43c0a5c1d 125 Pfam PF07883 Cupin domain 41 92 1.9E-10 T 22-04-2016 IPR013096 Cupin 2, conserved barrel RPIC12D_RS08745 fc5885fa7017d54d3e0283066780c6f8 252 Pfam PF11655 Protein of unknown function (DUF2589) 81 222 1.8E-20 T 22-04-2016 IPR024510 Protein of unknown function DUF2589 RPIC12D_RS03790 ab6de3c0c0ae1dd7a11dca20bd8f55c2 161 Gene3D G3DSA:3.40.50.1810 3 141 2.5E-22 T 22-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 RPIC12D_RS03790 ab6de3c0c0ae1dd7a11dca20bd8f55c2 161 SUPERFAMILY SSF52309 3 159 2.98E-45 T 22-04-2016 RPIC12D_RS03790 ab6de3c0c0ae1dd7a11dca20bd8f55c2 161 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 5 137 2.7E-43 T 22-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 RPIC12D_RS03790 ab6de3c0c0ae1dd7a11dca20bd8f55c2 161 PANTHER PTHR15364:SF1 4 151 2.6E-47 T 22-04-2016 RPIC12D_RS03790 ab6de3c0c0ae1dd7a11dca20bd8f55c2 161 PANTHER PTHR15364 4 151 2.6E-47 T 22-04-2016 RPIC12D_RS03350 3e4673dd4c0f7eee3ee848e00ab4a33f 184 Pfam PF11072 Protein of unknown function (DUF2859) 36 182 5.1E-56 T 22-04-2016 IPR021300 Integrating conjugative element protein, PFL4695 RPIC12D_RS03350 3e4673dd4c0f7eee3ee848e00ab4a33f 184 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 80 183 7.1E-42 T 22-04-2016 IPR021300 Integrating conjugative element protein, PFL4695 RPIC12D_RS00555 6bc5919f27e46ffa1003f090591ae3be 295 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 253 1.3E-52 T 22-04-2016 RPIC12D_RS00555 6bc5919f27e46ffa1003f090591ae3be 295 PANTHER PTHR24317:SF5 1 289 1.4E-118 T 22-04-2016 RPIC12D_RS00555 6bc5919f27e46ffa1003f090591ae3be 295 SUPERFAMILY SSF51735 12 254 1.1E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS00555 6bc5919f27e46ffa1003f090591ae3be 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 2.3E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00555 6bc5919f27e46ffa1003f090591ae3be 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 2.3E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00555 6bc5919f27e46ffa1003f090591ae3be 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 2.3E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00555 6bc5919f27e46ffa1003f090591ae3be 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 8.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00555 6bc5919f27e46ffa1003f090591ae3be 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 8.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00555 6bc5919f27e46ffa1003f090591ae3be 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 8.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00555 6bc5919f27e46ffa1003f090591ae3be 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 8.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00555 6bc5919f27e46ffa1003f090591ae3be 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 8.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00555 6bc5919f27e46ffa1003f090591ae3be 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 8.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS00555 6bc5919f27e46ffa1003f090591ae3be 295 Gene3D G3DSA:3.40.50.720 3 254 6.6E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS00555 6bc5919f27e46ffa1003f090591ae3be 295 PANTHER PTHR24317 1 289 1.4E-118 T 22-04-2016 RPIC12D_RS27105 69a85d674e9b17c9ff7288065791375e 97 SUPERFAMILY SSF56801 2 87 7.59E-10 T 22-04-2016 RPIC12D_RS27105 69a85d674e9b17c9ff7288065791375e 97 Gene3D G3DSA:3.40.50.980 2 93 6.4E-6 T 22-04-2016 RPIC12D_RS27105 69a85d674e9b17c9ff7288065791375e 97 Pfam PF00501 AMP-binding enzyme 2 86 4.7E-5 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC12D_RS05460 45439eab2f322c962f7bfe574ec49d20 358 Gene3D G3DSA:3.60.21.10 58 117 7.9E-12 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS05460 45439eab2f322c962f7bfe574ec49d20 358 Gene3D G3DSA:3.60.21.10 196 287 7.9E-12 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS05460 45439eab2f322c962f7bfe574ec49d20 358 SUPERFAMILY SSF56300 153 286 1.25E-12 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS05460 45439eab2f322c962f7bfe574ec49d20 358 SUPERFAMILY SSF56300 58 123 1.25E-12 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS27110 7279cc65dc07be4b3d34a6c4e60418af 78 Gene3D G3DSA:3.40.50.300 1 77 1.4E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS05755 0cf956ccef1fa968f527a0030104bc4c 287 SUPERFAMILY SSF56219 5 285 2.49E-32 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC12D_RS05755 0cf956ccef1fa968f527a0030104bc4c 287 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 277 2.0E-19 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC12D_RS05755 0cf956ccef1fa968f527a0030104bc4c 287 Gene3D G3DSA:3.60.10.10 5 285 2.8E-22 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC12D_RS04250 12fdf6c7acaebf51ac6425037abf0579 107 Pfam PF06305 Protein of unknown function (DUF1049) 23 83 1.0E-14 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 RPIC12D_RS04780 f590e8afbaa18a490c4fe7c5565f076e 247 PANTHER PTHR35603 91 239 2.2E-15 T 22-04-2016 RPIC12D_RS04780 f590e8afbaa18a490c4fe7c5565f076e 247 Pfam PF05433 Glycine zipper 2TM domain 160 198 1.3E-8 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 RPIC12D_RS10680 de7042de3d7a1484b68618fda7933c08 113 SUPERFAMILY SSF46626 33 107 2.07E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS10680 de7042de3d7a1484b68618fda7933c08 113 Gene3D G3DSA:1.10.760.10 32 107 2.1E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC12D_RS10680 de7042de3d7a1484b68618fda7933c08 113 PRINTS PR00606 Class ID cytochrome C signature 50 63 1.6E-13 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC12D_RS10680 de7042de3d7a1484b68618fda7933c08 113 PRINTS PR00606 Class ID cytochrome C signature 98 108 1.6E-13 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC12D_RS10680 de7042de3d7a1484b68618fda7933c08 113 PRINTS PR00606 Class ID cytochrome C signature 86 96 1.6E-13 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC12D_RS10680 de7042de3d7a1484b68618fda7933c08 113 PRINTS PR00606 Class ID cytochrome C signature 35 48 1.6E-13 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC12D_RS15525 b772a90610fdecb0a0260049699d1715 108 Pfam PF07110 EthD domain 18 91 4.8E-10 T 22-04-2016 IPR009799 EthD domain RPIC12D_RS15525 b772a90610fdecb0a0260049699d1715 108 Gene3D G3DSA:3.30.70.900 2 100 4.9E-44 T 22-04-2016 RPIC12D_RS15525 b772a90610fdecb0a0260049699d1715 108 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 1 103 4.5E-32 T 22-04-2016 IPR009799 EthD domain RPIC12D_RS15525 b772a90610fdecb0a0260049699d1715 108 SUPERFAMILY SSF54909 1 102 6.17E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC12D_RS15525 b772a90610fdecb0a0260049699d1715 108 PANTHER PTHR40260 1 106 4.5E-22 T 22-04-2016 RPIC12D_RS06825 5e08f4796c47fb876b7e75646dea77d3 602 Gene3D G3DSA:3.40.50.1820 24 304 2.1E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS06825 5e08f4796c47fb876b7e75646dea77d3 602 SUPERFAMILY SSF53474 22 308 2.07E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS06825 5e08f4796c47fb876b7e75646dea77d3 602 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 471 499 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC12D_RS06825 5e08f4796c47fb876b7e75646dea77d3 602 SUPERFAMILY SSF51735 330 589 1.33E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS06825 5e08f4796c47fb876b7e75646dea77d3 602 PANTHER PTHR24322 339 468 4.0E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS06825 5e08f4796c47fb876b7e75646dea77d3 602 PANTHER PTHR24322 484 516 4.0E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS06825 5e08f4796c47fb876b7e75646dea77d3 602 Pfam PF00561 alpha/beta hydrolase fold 47 155 1.8E-19 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS06825 5e08f4796c47fb876b7e75646dea77d3 602 Gene3D G3DSA:3.40.50.720 333 569 3.2E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS06825 5e08f4796c47fb876b7e75646dea77d3 602 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 410 421 4.2E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS06825 5e08f4796c47fb876b7e75646dea77d3 602 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 505 522 4.2E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS06825 5e08f4796c47fb876b7e75646dea77d3 602 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 458 474 4.2E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS06825 5e08f4796c47fb876b7e75646dea77d3 602 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 336 353 4.2E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS06825 5e08f4796c47fb876b7e75646dea77d3 602 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 484 503 4.2E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS06825 5e08f4796c47fb876b7e75646dea77d3 602 Pfam PF00106 short chain dehydrogenase 335 524 2.6E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS06825 5e08f4796c47fb876b7e75646dea77d3 602 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 464 472 1.0E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS06825 5e08f4796c47fb876b7e75646dea77d3 602 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 484 503 1.0E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS06825 5e08f4796c47fb876b7e75646dea77d3 602 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 410 421 1.0E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC12D_RS08520 27d564d319fee8b41c5339049b7b6866 360 Pfam PF06812 ImpA, N-terminal, type VI secretion system 28 150 9.7E-30 T 22-04-2016 IPR010657 ImpA, N-terminal RPIC12D_RS08520 27d564d319fee8b41c5339049b7b6866 360 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 21 347 1.5E-50 T 22-04-2016 IPR017740 Type VI secretion system-associated, ImpA RPIC12D_RS08520 27d564d319fee8b41c5339049b7b6866 360 PANTHER PTHR37951:SF2 12 356 3.6E-80 T 22-04-2016 RPIC12D_RS08520 27d564d319fee8b41c5339049b7b6866 360 PANTHER PTHR37951 12 356 3.6E-80 T 22-04-2016 RPIC12D_RS05385 64b43f5e78aba33b4d70f27e5921968f 305 Pfam PF12697 Alpha/beta hydrolase family 38 296 3.1E-23 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC12D_RS05385 64b43f5e78aba33b4d70f27e5921968f 305 PANTHER PTHR10992 14 304 5.0E-40 T 22-04-2016 RPIC12D_RS05385 64b43f5e78aba33b4d70f27e5921968f 305 Gene3D G3DSA:3.40.50.1820 13 302 8.7E-64 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS05385 64b43f5e78aba33b4d70f27e5921968f 305 SUPERFAMILY SSF53474 14 302 1.86E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS03345 dcc9d5b15f6f8376766a9cdced7e3e65 194 SUPERFAMILY SSF53955 104 177 2.55E-14 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC12D_RS03345 dcc9d5b15f6f8376766a9cdced7e3e65 194 SUPERFAMILY SSF53955 34 76 2.55E-14 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC12D_RS03345 dcc9d5b15f6f8376766a9cdced7e3e65 194 Gene3D G3DSA:1.10.530.10 35 166 2.2E-10 T 22-04-2016 RPIC12D_RS03345 dcc9d5b15f6f8376766a9cdced7e3e65 194 Pfam PF01464 Transglycosylase SLT domain 37 158 2.7E-5 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RPIC12D_RS11055 a4e8ff900fc2b5b0b696a402a255a299 191 PIRSF PIRSF006135 4 185 3.8E-55 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 RPIC12D_RS11055 a4e8ff900fc2b5b0b696a402a255a299 191 SUPERFAMILY SSF52540 5 183 3.24E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11055 a4e8ff900fc2b5b0b696a402a255a299 191 Gene3D G3DSA:3.40.50.300 5 183 4.6E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS11055 a4e8ff900fc2b5b0b696a402a255a299 191 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 6 181 1.7E-61 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 RPIC12D_RS11055 a4e8ff900fc2b5b0b696a402a255a299 191 PANTHER PTHR34848 4 185 4.9E-74 T 22-04-2016 RPIC12D_RS02760 19cc64448f789cf8482daddc2069395c 287 PANTHER PTHR30373 3 287 1.8E-51 T 22-04-2016 RPIC12D_RS02760 19cc64448f789cf8482daddc2069395c 287 PANTHER PTHR30373:SF2 3 287 1.8E-51 T 22-04-2016 RPIC12D_RS02760 19cc64448f789cf8482daddc2069395c 287 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 41 168 8.2E-35 T 22-04-2016 IPR007621 TPM domain RPIC12D_RS06645 3f4a33a535654dd6b1ca5cab0daad1ca 271 PIRSF PIRSF015853 1 271 1.5E-103 T 22-04-2016 IPR007035 Peptidase M55, D-aminopeptidase RPIC12D_RS06645 3f4a33a535654dd6b1ca5cab0daad1ca 271 Gene3D G3DSA:3.40.50.10780 1 210 1.9E-78 T 22-04-2016 IPR027476 D-aminopeptidase, N-terminal RPIC12D_RS06645 3f4a33a535654dd6b1ca5cab0daad1ca 271 Pfam PF04951 D-aminopeptidase 1 261 5.4E-96 T 22-04-2016 IPR007035 Peptidase M55, D-aminopeptidase RPIC12D_RS06645 3f4a33a535654dd6b1ca5cab0daad1ca 271 SUPERFAMILY SSF63992 1 271 1.83E-101 T 22-04-2016 IPR007035 Peptidase M55, D-aminopeptidase RPIC12D_RS11885 43378dc60baebbaf8c807162ac9a934a 91 Gene3D G3DSA:1.10.357.10 18 69 7.0E-4 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC12D_RS07185 201e4394d983e03859e9c3fc58fa48e5 84 PANTHER PTHR30199 9 84 3.3E-14 T 22-04-2016 RPIC12D_RS07185 201e4394d983e03859e9c3fc58fa48e5 84 PANTHER PTHR30199:SF0 9 84 3.3E-14 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 RPIC12D_RS07185 201e4394d983e03859e9c3fc58fa48e5 84 Pfam PF03594 Benzoate membrane transport protein 13 77 2.4E-19 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 RPIC12D_RS06905 7c221efa6456c1ce7f25df578a264adc 214 Gene3D G3DSA:2.130.10.10 15 205 4.1E-20 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RPIC12D_RS06905 7c221efa6456c1ce7f25df578a264adc 214 SUPERFAMILY SSF50969 16 209 3.14E-26 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like RPIC12D_RS00080 1a2ecfdb4153bca7b2c554209a9d6ff3 315 PANTHER PTHR33281:SF3 1 305 3.3E-75 T 22-04-2016 RPIC12D_RS00080 1a2ecfdb4153bca7b2c554209a9d6ff3 315 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 290 2.0E-66 T 22-04-2016 IPR021134 Bestrophin/UPF0187 RPIC12D_RS00080 1a2ecfdb4153bca7b2c554209a9d6ff3 315 PANTHER PTHR33281 1 305 3.3E-75 T 22-04-2016 RPIC12D_RS02375 d018ee87011cc08fd827995cf5d483d7 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 104 7.4E-29 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD RPIC12D_RS05405 9de8fe52c8a5e77d57380ff461157f58 286 Gene3D G3DSA:3.20.20.140 12 95 9.3E-37 T 22-04-2016 RPIC12D_RS05405 9de8fe52c8a5e77d57380ff461157f58 286 Gene3D G3DSA:3.20.20.140 165 262 9.3E-37 T 22-04-2016 RPIC12D_RS05405 9de8fe52c8a5e77d57380ff461157f58 286 PANTHER PTHR30007 13 286 2.2E-67 T 22-04-2016 RPIC12D_RS05405 9de8fe52c8a5e77d57380ff461157f58 286 Pfam PF02811 PHP domain 13 93 3.8E-7 T 22-04-2016 IPR004013 PHP domain GO:0003824 RPIC12D_RS05405 9de8fe52c8a5e77d57380ff461157f58 286 SMART SM00481 12 77 5.9E-12 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RPIC12D_RS05405 9de8fe52c8a5e77d57380ff461157f58 286 PANTHER PTHR30007:SF4 13 286 2.2E-67 T 22-04-2016 RPIC12D_RS05405 9de8fe52c8a5e77d57380ff461157f58 286 SUPERFAMILY SSF89550 12 90 8.63E-49 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RPIC12D_RS05405 9de8fe52c8a5e77d57380ff461157f58 286 SUPERFAMILY SSF89550 173 284 8.63E-49 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RPIC12D_RS00145 300cb2d53d5b9ebea6fbb7087e70fa18 97 Pfam PF08734 GYD domain 4 92 8.1E-32 T 22-04-2016 IPR014845 Uncharacterised protein GYD RPIC12D_RS16300 243ce72d9a9813825988d5c50cecf0fe 390 PIRSF PIRSF004810 3 388 2.2E-88 T 22-04-2016 IPR014047 Chromate transporter, long chain RPIC12D_RS16300 243ce72d9a9813825988d5c50cecf0fe 390 Pfam PF02417 Chromate transporter 218 381 2.4E-34 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 RPIC12D_RS16300 243ce72d9a9813825988d5c50cecf0fe 390 Pfam PF02417 Chromate transporter 14 178 2.8E-34 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 RPIC12D_RS16300 243ce72d9a9813825988d5c50cecf0fe 390 TIGRFAM TIGR00937 2A51: chromate efflux transporter 19 381 2.7E-139 T 22-04-2016 IPR014047 Chromate transporter, long chain RPIC12D_RS16300 243ce72d9a9813825988d5c50cecf0fe 390 PANTHER PTHR33567 1 390 4.4E-63 T 22-04-2016 RPIC12D_RS02010 7e6353743827e642fa21c489a48766f3 242 PANTHER PTHR34979 1 240 2.3E-39 T 22-04-2016 RPIC12D_RS02010 7e6353743827e642fa21c489a48766f3 242 Pfam PF03591 AzlC protein 18 163 2.9E-42 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease RPIC12D_RS01225 578241234978364c5aa1ac40ebd007ee 201 PANTHER PTHR12151 43 201 5.1E-61 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC RPIC12D_RS01225 578241234978364c5aa1ac40ebd007ee 201 Gene3D G3DSA:3.40.30.10 14 201 2.1E-63 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS01225 578241234978364c5aa1ac40ebd007ee 201 Pfam PF02630 SCO1/SenC 20 178 2.2E-40 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC RPIC12D_RS01225 578241234978364c5aa1ac40ebd007ee 201 SUPERFAMILY SSF52833 42 199 8.69E-53 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS06445 061e044ea5fec054e3a3d79c95d2079b 224 SUPERFAMILY SSF53474 22 193 5.57E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS06445 061e044ea5fec054e3a3d79c95d2079b 224 Gene3D G3DSA:3.40.50.1820 21 196 2.2E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC12D_RS06445 061e044ea5fec054e3a3d79c95d2079b 224 Pfam PF06821 Serine hydrolase 23 194 6.1E-59 T 22-04-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- RPIC12D_RS05190 5531dcd538a1ba76ce33f75f586b0f62 345 Gene3D G3DSA:1.10.150.320 211 255 8.3E-5 T 22-04-2016 RPIC12D_RS05190 5531dcd538a1ba76ce33f75f586b0f62 345 Pfam PF01548 Transposase 6 143 8.4E-14 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS05190 5531dcd538a1ba76ce33f75f586b0f62 345 PANTHER PTHR33055:SF2 2 338 1.6E-139 T 22-04-2016 RPIC12D_RS05190 5531dcd538a1ba76ce33f75f586b0f62 345 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 286 2.4E-25 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RPIC12D_RS05190 5531dcd538a1ba76ce33f75f586b0f62 345 PANTHER PTHR33055 2 338 1.6E-139 T 22-04-2016 RPIC12D_RS01070 e21f5a13ece898de839c8b3bb3c34d8b 271 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 39 270 7.4E-68 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 RPIC12D_RS01070 e21f5a13ece898de839c8b3bb3c34d8b 271 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 15 270 6.2E-78 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 RPIC12D_RS02785 89b2fb202c2bc3ab3af800bd3a899b02 60 ProSitePatterns PS00202 Rubredoxin signature. 39 49 - T 22-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 RPIC12D_RS02785 89b2fb202c2bc3ab3af800bd3a899b02 60 Pfam PF00301 Rubredoxin 10 55 9.3E-23 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 RPIC12D_RS02785 89b2fb202c2bc3ab3af800bd3a899b02 60 PRINTS PR00163 Rubredoxin signature 39 55 3.7E-8 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 RPIC12D_RS02785 89b2fb202c2bc3ab3af800bd3a899b02 60 PRINTS PR00163 Rubredoxin signature 9 25 3.7E-8 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 RPIC12D_RS02785 89b2fb202c2bc3ab3af800bd3a899b02 60 SUPERFAMILY SSF57802 5 59 1.85E-23 T 22-04-2016 RPIC12D_RS02785 89b2fb202c2bc3ab3af800bd3a899b02 60 PIRSF PIRSF000071 1 60 4.8E-26 T 22-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 RPIC12D_RS02785 89b2fb202c2bc3ab3af800bd3a899b02 60 Gene3D G3DSA:2.20.28.10 5 59 2.5E-26 T 22-04-2016 IPR004039 Rubredoxin-type fold RPIC12D_RS07080 a709a18a23fba093369eb839d2da00d4 367 Gene3D G3DSA:3.40.50.720 1 275 3.2E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS07080 a709a18a23fba093369eb839d2da00d4 367 Gene3D G3DSA:3.40.50.720 316 349 3.2E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS07080 a709a18a23fba093369eb839d2da00d4 367 Pfam PF07993 Male sterility protein 5 233 2.9E-26 T 22-04-2016 IPR013120 Male sterility, NAD-binding Reactome: REACT_22258 RPIC12D_RS07080 a709a18a23fba093369eb839d2da00d4 367 PANTHER PTHR10366:SF382 2 289 1.5E-55 T 22-04-2016 RPIC12D_RS07080 a709a18a23fba093369eb839d2da00d4 367 PANTHER PTHR10366:SF382 314 351 1.5E-55 T 22-04-2016 RPIC12D_RS07080 a709a18a23fba093369eb839d2da00d4 367 PANTHER PTHR10366 2 289 1.5E-55 T 22-04-2016 RPIC12D_RS07080 a709a18a23fba093369eb839d2da00d4 367 PANTHER PTHR10366 314 351 1.5E-55 T 22-04-2016 RPIC12D_RS07080 a709a18a23fba093369eb839d2da00d4 367 SUPERFAMILY SSF51735 1 267 1.32E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS07080 a709a18a23fba093369eb839d2da00d4 367 SUPERFAMILY SSF51735 316 351 1.32E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC12D_RS08005 cc2266cb9dd64c908860b2516fb53a25 67 Pfam PF04325 Protein of unknown function (DUF465) 14 57 1.3E-10 T 22-04-2016 IPR007420 Protein of unknown function DUF465 RPIC12D_RS03540 cce412b1b20d28cdf1c32e68bdef3537 190 SUPERFAMILY SSF54523 10 93 4.79E-13 T 22-04-2016 RPIC12D_RS03540 cce412b1b20d28cdf1c32e68bdef3537 190 Gene3D G3DSA:3.30.700.10 10 47 1.3E-4 T 22-04-2016 RPIC12D_RS03540 cce412b1b20d28cdf1c32e68bdef3537 190 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 30 1.4E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC12D_RS03540 cce412b1b20d28cdf1c32e68bdef3537 190 Pfam PF12019 Type II transport protein GspH 46 167 4.1E-9 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RPIC12D_RS00170 d376a873a65630d1c6d27db0a029995c 275 PIRSF PIRSF028756 12 268 1.4E-76 T 22-04-2016 IPR016898 Polyphosphate kinase 2 RPIC12D_RS00170 d376a873a65630d1c6d27db0a029995c 275 SUPERFAMILY SSF52540 67 256 1.92E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS00170 d376a873a65630d1c6d27db0a029995c 275 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 40 258 2.8E-72 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related RPIC12D_RS00170 d376a873a65630d1c6d27db0a029995c 275 Gene3D G3DSA:3.40.50.300 10 264 1.6E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS00170 d376a873a65630d1c6d27db0a029995c 275 PANTHER PTHR34383 36 263 2.0E-107 T 22-04-2016 RPIC12D_RS00170 d376a873a65630d1c6d27db0a029995c 275 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 12 265 7.1E-110 T 22-04-2016 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 RPIC12D_RS12185 0cfc1f5f5b545b1cd339feb4c3480be8 246 Pfam PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA 74 245 8.0E-91 T 22-04-2016 IPR018655 Protein of unknown function DUF2086 RPIC12D_RS01825 b9db9b799dc562edce6767d9b7a4aec9 254 PANTHER PTHR11941:SF17 3 250 2.7E-85 T 22-04-2016 RPIC12D_RS01825 b9db9b799dc562edce6767d9b7a4aec9 254 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 251 1.4E-52 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC12D_RS01825 b9db9b799dc562edce6767d9b7a4aec9 254 PANTHER PTHR11941 3 250 2.7E-85 T 22-04-2016 RPIC12D_RS01825 b9db9b799dc562edce6767d9b7a4aec9 254 Gene3D G3DSA:3.90.226.10 2 250 1.0E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS01825 b9db9b799dc562edce6767d9b7a4aec9 254 SUPERFAMILY SSF52096 3 252 1.44E-75 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC12D_RS10975 b2504a7f7d1224b8b5df2bb4b0cccb59 83 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 15 81 2.7E-17 T 22-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing RPIC12D_RS10975 b2504a7f7d1224b8b5df2bb4b0cccb59 83 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 22 47 0.0012 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RPIC12D_RS16175 28bce904cf96fed41c40d79a263c15a0 99 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 95 24.833 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RPIC12D_RS16175 28bce904cf96fed41c40d79a263c15a0 99 PANTHER PTHR12599:SF7 2 96 1.9E-51 T 22-04-2016 RPIC12D_RS16175 28bce904cf96fed41c40d79a263c15a0 99 SUPERFAMILY SSF55248 1 95 9.94E-37 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RPIC12D_RS16175 28bce904cf96fed41c40d79a263c15a0 99 Gene3D G3DSA:3.30.1360.20 1 96 2.1E-38 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RPIC12D_RS16175 28bce904cf96fed41c40d79a263c15a0 99 PANTHER PTHR12599 2 96 1.9E-51 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RPIC12D_RS16175 28bce904cf96fed41c40d79a263c15a0 99 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 5 93 2.4E-32 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RPIC12D_RS02980 50e7f575d767ae0cc49fb2fc407fe754 266 Pfam PF02706 Chain length determinant protein 7 126 4.4E-6 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 RPIC12D_RS07315 3b0905be4e7948ff7407aedab44791ca 283 PANTHER PTHR30193 17 276 8.4E-40 T 22-04-2016 RPIC12D_RS07315 3b0905be4e7948ff7407aedab44791ca 283 SUPERFAMILY SSF161098 18 272 2.15E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS07315 3b0905be4e7948ff7407aedab44791ca 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 271 5.5E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS07315 3b0905be4e7948ff7407aedab44791ca 283 Gene3D G3DSA:1.10.3720.10 23 273 8.3E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC12D_RS10450 78271e3842b4bccca30d4710719607c7 456 Pfam PF16933 Putative exopolysaccharide Exporter (EPS-E) 1 453 1.8E-170 T 22-04-2016 IPR031617 Putative exopolysaccharide exporter RPIC12D_RS14465 a064a5f93d00fa667a7ce66fdc69832b 175 Pfam PF02470 MlaD protein 39 116 1.5E-21 T 22-04-2016 IPR003399 Mce/MlaD RPIC12D_RS14465 a064a5f93d00fa667a7ce66fdc69832b 175 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 147 2.9E-60 T 22-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 RPIC12D_RS14465 a064a5f93d00fa667a7ce66fdc69832b 175 PANTHER PTHR33371 1 146 8.9E-42 T 22-04-2016 RPIC12D_RS16825 169ecba18256eaf04eb66200a4acfd30 674 PANTHER PTHR33908 183 551 3.6E-14 T 22-04-2016 RPIC12D_RS16825 169ecba18256eaf04eb66200a4acfd30 674 PANTHER PTHR33908 21 146 3.6E-14 T 22-04-2016 RPIC12D_RS05680 0aafa3677d5586952c90c9be9c41abb2 99 Gene3D G3DSA:3.30.70.900 1 96 1.6E-16 T 22-04-2016 RPIC12D_RS05680 0aafa3677d5586952c90c9be9c41abb2 99 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 77 1.4E-12 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain RPIC12D_RS05680 0aafa3677d5586952c90c9be9c41abb2 99 SUPERFAMILY SSF54909 1 97 4.98E-24 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC12D_RS03065 9264f38b6147770e7203594f87dd2f46 165 Pfam PF06146 Phosphate-starvation-inducible E 73 141 8.1E-17 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like RPIC12D_RS11520 4386da50e1e109de2efb69035d918d01 518 Pfam PF09588 YqaJ-like viral recombinase domain 12 145 2.9E-9 T 22-04-2016 IPR019080 YqaJ viral recombinase RPIC12D_RS11520 4386da50e1e109de2efb69035d918d01 518 SUPERFAMILY SSF52980 1 185 5.36E-22 T 22-04-2016 IPR011335 Restriction endonuclease type II-like RPIC12D_RS11520 4386da50e1e109de2efb69035d918d01 518 Gene3D G3DSA:3.90.320.10 1 188 2.5E-25 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 RPIC12D_RS12785 aa110f6034d78e86789946626884f749 193 PANTHER PTHR30529 12 193 2.5E-56 T 22-04-2016 RPIC12D_RS12785 aa110f6034d78e86789946626884f749 193 PANTHER PTHR30529:SF5 12 193 2.5E-56 T 22-04-2016 RPIC12D_RS12785 aa110f6034d78e86789946626884f749 193 Pfam PF01292 Prokaryotic cytochrome b561 20 190 4.1E-30 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RPIC12D_RS12785 aa110f6034d78e86789946626884f749 193 SUPERFAMILY SSF81342 20 190 2.75E-37 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RPIC12D_RS11940 f45d77bf9d0f7ede4cf7983fe4a8c1dc 443 ProSitePatterns PS00217 Sugar transport proteins signature 2. 136 161 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS11940 f45d77bf9d0f7ede4cf7983fe4a8c1dc 443 PANTHER PTHR23508 23 433 1.0E-157 T 22-04-2016 RPIC12D_RS11940 f45d77bf9d0f7ede4cf7983fe4a8c1dc 443 Pfam PF07690 Major Facilitator Superfamily 39 319 5.9E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS11940 f45d77bf9d0f7ede4cf7983fe4a8c1dc 443 Gene3D G3DSA:1.20.1250.20 252 437 5.0E-24 T 22-04-2016 RPIC12D_RS11940 f45d77bf9d0f7ede4cf7983fe4a8c1dc 443 Gene3D G3DSA:1.20.1250.20 23 231 1.8E-27 T 22-04-2016 RPIC12D_RS11940 f45d77bf9d0f7ede4cf7983fe4a8c1dc 443 PANTHER PTHR23508:SF11 23 433 1.0E-157 T 22-04-2016 RPIC12D_RS11940 f45d77bf9d0f7ede4cf7983fe4a8c1dc 443 SUPERFAMILY SSF103473 23 436 1.09E-70 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS11940 f45d77bf9d0f7ede4cf7983fe4a8c1dc 443 ProSitePatterns PS00216 Sugar transport proteins signature 1. 308 325 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS11940 f45d77bf9d0f7ede4cf7983fe4a8c1dc 443 ProSitePatterns PS00216 Sugar transport proteins signature 1. 86 102 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC12D_RS00400 be71ca9c881828bbadd3e1820f6d198b 138 PANTHER PTHR36437 1 135 1.7E-23 T 22-04-2016 RPIC12D_RS00400 be71ca9c881828bbadd3e1820f6d198b 138 Gene3D G3DSA:3.10.180.10 1 132 1.2E-22 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS00400 be71ca9c881828bbadd3e1820f6d198b 138 SUPERFAMILY SSF54593 3 135 2.01E-25 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC12D_RS00400 be71ca9c881828bbadd3e1820f6d198b 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 128 2.1E-13 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC12D_RS06275 e5830f0368d0ea1da00b32ae1a23c588 336 PANTHER PTHR11101 1 336 7.9E-101 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RPIC12D_RS06275 e5830f0368d0ea1da00b32ae1a23c588 336 Pfam PF01384 Phosphate transporter family 25 166 3.8E-36 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RPIC12D_RS06275 e5830f0368d0ea1da00b32ae1a23c588 336 Pfam PF01384 Phosphate transporter family 170 325 6.6E-55 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RPIC12D_RS05900 3748fc133d28270b8fea3060402eb98e 331 PANTHER PTHR13833 47 238 8.5E-17 T 22-04-2016 RPIC12D_RS05900 3748fc133d28270b8fea3060402eb98e 331 PANTHER PTHR13833 282 323 8.5E-17 T 22-04-2016 RPIC12D_RS05900 3748fc133d28270b8fea3060402eb98e 331 Pfam PF10282 Lactonase, 7-bladed beta-propeller 94 304 1.2E-11 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 RPIC12D_RS05900 3748fc133d28270b8fea3060402eb98e 331 Gene3D G3DSA:2.130.10.10 25 324 2.8E-53 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RPIC12D_RS05900 3748fc133d28270b8fea3060402eb98e 331 SUPERFAMILY SSF50974 10 324 1.15E-72 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal RPIC12D_RS02345 10801acaf700147c27c12b1218e5d3ca 193 Pfam PF11161 Protein of unknown function (DUF2946) 1 192 2.3E-71 T 22-04-2016 IPR021332 Protein of unknown function DUF2944 RPIC12D_RS06470 2553a1d29412260ec1586ee1192c18f1 103 Pfam PF13239 2TM domain 21 77 6.8E-16 T 22-04-2016 IPR025698 2TM domain RPIC12D_RS07765 6cdc96de16512ccc4175d0356ca8946f 141 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 34 107 2.1E-17 T 22-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 RPIC12D_RS07765 6cdc96de16512ccc4175d0356ca8946f 141 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 28 123 8.6E-33 T 22-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 RPIC12D_RS07765 6cdc96de16512ccc4175d0356ca8946f 141 PANTHER PTHR36835 15 126 3.7E-30 T 22-04-2016 RPIC12D_RS17300 ae07a9e414e17d7bc70b6fd681c87944 76 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 21 67 2.2E-9 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) RPIC12D_RS04655 8dd59738c0d706edb7c86a67c7b94beb 144 Pfam PF08897 Domain of unknown function (DUF1841) 5 139 3.2E-63 T 22-04-2016 IPR014993 Protein of unknown function DUF1841 RPIC12D_RS05980 5bfb58399ce30d59b3afe03f0af58f5b 250 SUPERFAMILY SSF51695 11 247 8.89E-64 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RPIC12D_RS05980 5bfb58399ce30d59b3afe03f0af58f5b 250 PANTHER PTHR23344:SF20 8 247 5.5E-59 T 22-04-2016 RPIC12D_RS05980 5bfb58399ce30d59b3afe03f0af58f5b 250 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 18 245 4.8E-39 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RPIC12D_RS05980 5bfb58399ce30d59b3afe03f0af58f5b 250 Gene3D G3DSA:3.20.20.190 8 247 7.6E-63 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RPIC12D_RS05980 5bfb58399ce30d59b3afe03f0af58f5b 250 PANTHER PTHR23344 8 247 5.5E-59 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 RPIC12D_RS03710 8db0647413079d5c9ae90a4685b84a73 221 SUPERFAMILY SSF56300 53 211 1.33E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS03710 8db0647413079d5c9ae90a4685b84a73 221 Gene3D G3DSA:3.60.21.10 54 213 1.3E-15 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC12D_RS14830 009b098a839ccb1c5164f2959250ce93 234 Pfam PF06672 Protein of unknown function (DUF1175) 28 233 7.7E-85 T 22-04-2016 IPR009558 Protein of unknown function DUF1175 RPIC12D_RS14830 009b098a839ccb1c5164f2959250ce93 234 Gene3D G3DSA:3.90.1720.10 156 207 2.8E-5 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC12D_RS05690 5888ff934c56ac93a8e0e1d2645ae74a 446 Pfam PF04966 Carbohydrate-selective porin, OprB family 63 446 1.2E-70 T 22-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS10860 44c00deadef8a053ef54b2012b961023 175 PANTHER PTHR10286 3 175 1.6E-68 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RPIC12D_RS10860 44c00deadef8a053ef54b2012b961023 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RPIC12D_RS10860 44c00deadef8a053ef54b2012b961023 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.619 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RPIC12D_RS10860 44c00deadef8a053ef54b2012b961023 175 SUPERFAMILY SSF50324 3 175 2.35E-68 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RPIC12D_RS10860 44c00deadef8a053ef54b2012b961023 175 Gene3D G3DSA:3.90.80.10 3 175 3.9E-61 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RPIC12D_RS10860 44c00deadef8a053ef54b2012b961023 175 Pfam PF00719 Inorganic pyrophosphatase 18 174 4.3E-52 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RPIC12D_RS10665 478f0138deef4480118f45261231d2e3 115 Pfam PF13467 Ribbon-helix-helix domain 16 83 5.6E-24 T 22-04-2016 IPR027373 Ribbon-helix-helix domain RPIC12D_RS11510 477ae49f98c45114c93001860f000c9e 87 Pfam PF13619 KTSC domain 11 71 1.4E-19 T 22-04-2016 IPR025309 KTSC domain RPIC12D_RS20665 02d765eb851727dc6da088b438b5f748 254 Gene3D G3DSA:3.90.870.10 1 196 1.7E-95 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RPIC12D_RS20665 02d765eb851727dc6da088b438b5f748 254 SUPERFAMILY SSF55821 1 187 1.6E-83 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RPIC12D_RS20665 02d765eb851727dc6da088b438b5f748 254 PANTHER PTHR21327 1 252 4.6E-123 T 22-04-2016 RPIC12D_RS20665 02d765eb851727dc6da088b438b5f748 254 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 1 183 2.7E-81 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC12D_RS20665 02d765eb851727dc6da088b438b5f748 254 PANTHER PTHR21327:SF6 1 252 4.6E-123 T 22-04-2016 RPIC12D_RS20665 02d765eb851727dc6da088b438b5f748 254 Pfam PF00925 GTP cyclohydrolase II 192 252 8.9E-11 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RPIC12D_RS20665 02d765eb851727dc6da088b438b5f748 254 SUPERFAMILY SSF142695 189 252 2.22E-16 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RPIC12D_RS20665 02d765eb851727dc6da088b438b5f748 254 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 1 184 2.2E-74 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC12D_RS10560 fd6644a7d0d9e43a0e2f3f142085372d 90 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 28 89 1.7E-13 T 22-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 RPIC12D_RS10560 fd6644a7d0d9e43a0e2f3f142085372d 90 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 11 89 9.8E-30 T 22-04-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 RPIC12D_RS03505 fdd11dec6cf478599e351bc9140f6028 394 Gene3D G3DSA:1.10.530.10 221 311 5.9E-20 T 22-04-2016 RPIC12D_RS03505 fdd11dec6cf478599e351bc9140f6028 394 SUPERFAMILY SSF53955 213 309 3.18E-20 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC12D_RS03505 fdd11dec6cf478599e351bc9140f6028 394 PANTHER PTHR21666 201 313 2.2E-16 T 22-04-2016 RPIC12D_RS03505 fdd11dec6cf478599e351bc9140f6028 394 Pfam PF01464 Transglycosylase SLT domain 224 301 2.7E-14 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RPIC12D_RS09940 e82043e569c0ec7f3af4faa6f45a005a 241 PANTHER PTHR41293 2 241 6.9E-94 T 22-04-2016 RPIC12D_RS09940 e82043e569c0ec7f3af4faa6f45a005a 241 Pfam PF06149 Protein of unknown function (DUF969) 7 223 8.0E-85 T 22-04-2016 IPR010374 Protein of unknown function DUF969 RPIC12D_RS09940 e82043e569c0ec7f3af4faa6f45a005a 241 PANTHER PTHR41293:SF1 2 241 6.9E-94 T 22-04-2016 RPIC12D_RS02935 91ecfc55d2e8d93b54e2ec50aadd346d 312 SUPERFAMILY SSF51197 132 298 4.81E-10 T 22-04-2016 RPIC12D_RS02935 91ecfc55d2e8d93b54e2ec50aadd346d 312 Gene3D G3DSA:2.60.120.620 86 278 1.6E-4 T 22-04-2016 RPIC12D_RS03300 4375591166c6440d3655bbbb8aca2fbd 184 Pfam PF12101 Protein of unknown function (DUF3577) 4 132 4.5E-59 T 22-04-2016 IPR021960 Protein of unknown function DUF3577 RPIC12D_RS00995 5b7d6fe578a534bc087c9a526553d598 223 Pfam PF08722 TnsA endonuclease N terminal 45 130 9.7E-20 T 22-04-2016 IPR014833 TnsA endonuclease, N-terminal RPIC12D_RS00995 5b7d6fe578a534bc087c9a526553d598 223 Gene3D G3DSA:3.40.1350.10 15 132 7.1E-4 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 RPIC12D_RS00995 5b7d6fe578a534bc087c9a526553d598 223 Pfam PF08721 TnsA endonuclease C terminal 133 206 1.2E-6 T 22-04-2016 IPR014832 TnsA endonuclease C-terminal RPIC12D_RS17070 1317a1936df4343402bb2575382fd4f9 64 PANTHER PTHR38453 1 64 9.5E-30 T 22-04-2016 RPIC12D_RS17070 1317a1936df4343402bb2575382fd4f9 64 Pfam PF04328 Protein of unknown function (DUF466) 5 64 3.7E-29 T 22-04-2016 IPR007423 Protein of unknown function DUF466 RPIC12D_RS17070 1317a1936df4343402bb2575382fd4f9 64 PANTHER PTHR38453:SF1 1 64 9.5E-30 T 22-04-2016 RPIC12D_RS04825 575216d3c9647cc35a871a6a1f7c9a64 490 Pfam PF02646 RmuC family 180 471 7.3E-83 T 22-04-2016 IPR003798 DNA recombination RmuC RPIC12D_RS04825 575216d3c9647cc35a871a6a1f7c9a64 490 SUPERFAMILY SSF58113 33 187 3.2E-8 T 22-04-2016 RPIC12D_RS04825 575216d3c9647cc35a871a6a1f7c9a64 490 PANTHER PTHR30563 1 475 2.9E-93 T 22-04-2016 RPIC12D_RS03370 006780e7fea4c162fcdf2ac78ec71490 79 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 4 79 5.2E-30 T 22-04-2016 IPR021676 Protein of unknown function DUF3262 RPIC12D_RS03370 006780e7fea4c162fcdf2ac78ec71490 79 Pfam PF11660 Protein of unknown function (DUF3262) 4 78 6.6E-25 T 22-04-2016 IPR021676 Protein of unknown function DUF3262 RPIC12D_RS15305 bc87b4113bff1431b6e5fa60350db813 189 SUPERFAMILY SSF103054 108 183 4.71E-18 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain RPIC12D_RS15305 bc87b4113bff1431b6e5fa60350db813 189 Pfam PF04612 Type II secretion system (T2SS), protein M 27 183 2.7E-47 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 RPIC12D_RS15305 bc87b4113bff1431b6e5fa60350db813 189 Gene3D G3DSA:3.30.1360.100 108 184 1.1E-18 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain RPIC12D_RS09080 511264b40aaaf66e22dbe4d28d2a6909 66 Pfam PF05433 Glycine zipper 2TM domain 29 64 1.6E-6 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 RPIC12D_RS08595 09f5f8b4c1ec6bb27738346a94a0a791 273 Pfam PF01925 Sulfite exporter TauE/SafE 13 267 5.5E-48 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIC12D_RS08595 09f5f8b4c1ec6bb27738346a94a0a791 273 PANTHER PTHR30269 4 272 2.2E-52 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIC12D_RS08595 09f5f8b4c1ec6bb27738346a94a0a791 273 PANTHER PTHR30269:SF14 4 272 2.2E-52 T 22-04-2016 RPIC12D_RS16095 d033eba6f9b2182ef7c9751c831d1d51 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 16 282 3.3E-38 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS16095 d033eba6f9b2182ef7c9751c831d1d51 294 PANTHER PTHR11795 1 293 8.6E-115 T 22-04-2016 RPIC12D_RS16095 d033eba6f9b2182ef7c9751c831d1d51 294 PANTHER PTHR11795:SF379 1 293 8.6E-115 T 22-04-2016 RPIC12D_RS11110 8204608cf64fdff8edda4e2d2c923e8b 106 Gene3D G3DSA:1.20.5.170 15 44 8.7E-4 T 22-04-2016 RPIC12D_RS18800 b71ff07b1afe87226ba1cd066959c4d8 121 PANTHER PTHR32282:SF2 1 121 2.2E-77 T 22-04-2016 RPIC12D_RS18800 b71ff07b1afe87226ba1cd066959c4d8 121 SUPERFAMILY SSF52540 5 111 1.51E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS18800 b71ff07b1afe87226ba1cd066959c4d8 121 Gene3D G3DSA:3.40.50.300 10 121 4.6E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS18800 b71ff07b1afe87226ba1cd066959c4d8 121 PANTHER PTHR32282 1 121 2.2E-77 T 22-04-2016 RPIC12D_RS14805 58815de21752953d65ed1daf6563144d 196 SUPERFAMILY SSF53335 7 147 3.56E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS14805 58815de21752953d65ed1daf6563144d 196 Gene3D G3DSA:3.40.50.150 4 149 1.2E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC12D_RS14805 58815de21752953d65ed1daf6563144d 196 Pfam PF08241 Methyltransferase domain 45 137 8.4E-13 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RPIC12D_RS07275 1414e5c0ddf5e10915851eb17c94f5a1 434 PANTHER PTHR23508 26 429 5.1E-116 T 22-04-2016 RPIC12D_RS07275 1414e5c0ddf5e10915851eb17c94f5a1 434 PANTHER PTHR23508:SF13 26 429 5.1E-116 T 22-04-2016 RPIC12D_RS07275 1414e5c0ddf5e10915851eb17c94f5a1 434 SUPERFAMILY SSF103473 26 427 3.92E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC12D_RS07275 1414e5c0ddf5e10915851eb17c94f5a1 434 Gene3D G3DSA:1.20.1250.20 28 227 1.4E-21 T 22-04-2016 RPIC12D_RS07275 1414e5c0ddf5e10915851eb17c94f5a1 434 Gene3D G3DSA:1.20.1250.20 252 425 6.9E-16 T 22-04-2016 RPIC12D_RS07275 1414e5c0ddf5e10915851eb17c94f5a1 434 Pfam PF07690 Major Facilitator Superfamily 33 383 5.5E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC12D_RS10830 ed53af2ec5189b619c20adbd924d659c 207 Pfam PF03458 UPF0126 domain 100 173 3.1E-20 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 RPIC12D_RS10830 ed53af2ec5189b619c20adbd924d659c 207 Pfam PF03458 UPF0126 domain 12 82 1.5E-18 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 RPIC12D_RS10830 ed53af2ec5189b619c20adbd924d659c 207 PANTHER PTHR30506:SF3 4 207 1.9E-52 T 22-04-2016 RPIC12D_RS10830 ed53af2ec5189b619c20adbd924d659c 207 PANTHER PTHR30506 4 207 1.9E-52 T 22-04-2016 RPIC12D_RS10375 b609785349f5f916a639344c6f8d59c2 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 277 1.1E-38 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS10375 b609785349f5f916a639344c6f8d59c2 289 PANTHER PTHR11795 8 289 1.5E-70 T 22-04-2016 RPIC12D_RS10375 b609785349f5f916a639344c6f8d59c2 289 PANTHER PTHR11795:SF396 8 289 1.5E-70 T 22-04-2016 RPIC12D_RS10325 f1be4fe643b0d6e020b1e6444985a210 331 SUPERFAMILY SSF51445 74 322 3.21E-18 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RPIC12D_RS10325 f1be4fe643b0d6e020b1e6444985a210 331 Gene3D G3DSA:3.20.20.80 54 305 5.6E-9 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RPIC12D_RS10340 d2b1e761b0159e1db6d389081e971b46 368 SUPERFAMILY SSF51445 66 367 3.42E-42 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RPIC12D_RS10340 d2b1e761b0159e1db6d389081e971b46 368 Pfam PF03537 Glycoside-hydrolase family GH114 69 359 1.4E-34 T 22-04-2016 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain RPIC12D_RS06300 ded83d65efb5414da1d333a5b943b18f 297 Pfam PF01522 Polysaccharide deacetylase 15 170 7.1E-7 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIC12D_RS06300 ded83d65efb5414da1d333a5b943b18f 297 Gene3D G3DSA:3.20.20.370 86 268 5.3E-22 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIC12D_RS06300 ded83d65efb5414da1d333a5b943b18f 297 Gene3D G3DSA:3.20.20.370 14 38 5.3E-22 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIC12D_RS06300 ded83d65efb5414da1d333a5b943b18f 297 SUPERFAMILY SSF88713 15 41 4.77E-21 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIC12D_RS06300 ded83d65efb5414da1d333a5b943b18f 297 SUPERFAMILY SSF88713 86 256 4.77E-21 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIC12D_RS15360 450dca7142ec2164979191ac4e9a99f7 209 Pfam PF01966 HD domain 60 123 1.2E-4 T 22-04-2016 IPR006674 HD domain RPIC12D_RS15360 450dca7142ec2164979191ac4e9a99f7 209 PANTHER PTHR40202:SF1 24 198 7.4E-22 T 22-04-2016 RPIC12D_RS15360 450dca7142ec2164979191ac4e9a99f7 209 PANTHER PTHR40202 24 198 7.4E-22 T 22-04-2016 RPIC12D_RS15360 450dca7142ec2164979191ac4e9a99f7 209 SUPERFAMILY SSF109604 11 137 8.05E-29 T 22-04-2016 RPIC12D_RS10115 ea15e54c4efe91d6cb04632efb24f5bc 426 Pfam PF04932 O-Antigen ligase 199 346 1.0E-17 T 22-04-2016 IPR007016 O-antigen ligase-related RPIC12D_RS10115 ea15e54c4efe91d6cb04632efb24f5bc 426 PANTHER PTHR37422 2 420 1.7E-24 T 22-04-2016 RPIC12D_RS12145 e5657ba8f8f62badb4a7ff463ca71e00 107 Pfam PF12112 Protein of unknown function (DUF3579) 5 94 3.1E-38 T 22-04-2016 IPR021969 Protein of unknown function DUF3579 RPIC12D_RS15095 f632037175ee6fb76c3d22828b74c650 404 SUPERFAMILY SSF50998 115 334 6.54E-5 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RPIC12D_RS05765 2e55ceea9bec1f78fa23d27036a8a050 233 PANTHER PTHR23291 22 233 3.7E-40 T 22-04-2016 IPR006214 Bax inhibitor 1-related RPIC12D_RS05765 2e55ceea9bec1f78fa23d27036a8a050 233 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 24 225 6.9E-44 T 22-04-2016 RPIC12D_RS16800 2a4bfa801b3ebd72f339993e7a998fad 256 Pfam PF14334 Domain of unknown function (DUF4390) 41 197 1.4E-60 T 22-04-2016 IPR025500 Protein of unknown function DUF4390 RPIC12D_RS15000 33f2101c89a67078405a93241d9a85ca 208 Pfam PF07209 Protein of unknown function (DUF1415) 30 195 1.4E-62 T 22-04-2016 IPR009858 Protein of unknown function DUF1415 RPIC12D_RS01340 df518ba8be38e363a8213fbc2ad98cab 450 Pfam PF05193 Peptidase M16 inactive domain 198 377 2.4E-33 T 22-04-2016 IPR007863 Peptidase M16, C-terminal RPIC12D_RS01340 df518ba8be38e363a8213fbc2ad98cab 450 PANTHER PTHR11851:SF140 21 447 2.8E-76 T 22-04-2016 RPIC12D_RS01340 df518ba8be38e363a8213fbc2ad98cab 450 SUPERFAMILY SSF63411 262 448 3.83E-47 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RPIC12D_RS01340 df518ba8be38e363a8213fbc2ad98cab 450 Gene3D G3DSA:3.30.830.10 264 442 2.8E-33 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RPIC12D_RS01340 df518ba8be38e363a8213fbc2ad98cab 450 Gene3D G3DSA:3.30.830.10 32 225 5.7E-33 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RPIC12D_RS01340 df518ba8be38e363a8213fbc2ad98cab 450 SUPERFAMILY SSF63411 27 237 8.56E-39 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RPIC12D_RS01340 df518ba8be38e363a8213fbc2ad98cab 450 PANTHER PTHR11851 21 447 2.8E-76 T 22-04-2016 RPIC12D_RS22680 f1a0900a8fc6eed3a5cd64ec50b99f08 227 SUPERFAMILY SSF52540 2 187 2.74E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS22680 f1a0900a8fc6eed3a5cd64ec50b99f08 227 Gene3D G3DSA:3.40.50.300 160 185 6.9E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS22680 f1a0900a8fc6eed3a5cd64ec50b99f08 227 Gene3D G3DSA:1.10.486.10 2 123 2.3E-5 T 22-04-2016 RPIC12D_RS04120 84c417c5b333934dd38d947e965d1e9c 75 PANTHER PTHR33279 1 75 1.1E-21 T 22-04-2016 RPIC12D_RS04120 84c417c5b333934dd38d947e965d1e9c 75 Gene3D G3DSA:3.30.110.40 1 74 8.8E-32 T 22-04-2016 IPR001455 TusA-like domain RPIC12D_RS04120 84c417c5b333934dd38d947e965d1e9c 75 Pfam PF01206 Sulfurtransferase TusA 5 74 7.2E-26 T 22-04-2016 IPR001455 TusA-like domain RPIC12D_RS04120 84c417c5b333934dd38d947e965d1e9c 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 22-04-2016 IPR001455 TusA-like domain RPIC12D_RS04120 84c417c5b333934dd38d947e965d1e9c 75 SUPERFAMILY SSF64307 3 74 9.29E-26 T 22-04-2016 IPR001455 TusA-like domain RPIC12D_RS03375 b92555b2bb5787593ed8b54e8d32e16f 121 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 21 121 6.4E-45 T 22-04-2016 IPR021356 Integrating conjugative element protein PFL4702 RPIC12D_RS03375 b92555b2bb5787593ed8b54e8d32e16f 121 Pfam PF11190 Protein of unknown function (DUF2976) 34 120 1.9E-32 T 22-04-2016 IPR021356 Integrating conjugative element protein PFL4702 RPIC12D_RS04630 7a48fe7748155ec79639f022bb872802 391 Pfam PF05762 VWA domain containing CoxE-like protein 185 273 1.8E-7 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like RPIC12D_RS06870 71da895b7c4071855707330b2f8c97f1 179 Pfam PF13511 Domain of unknown function (DUF4124) 16 62 2.3E-5 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 RPIC12D_RS01540 449a93016b0f465c7cc6a5bcbc26fb32 109 TIGRFAM TIGR02953 penta_MxKDx: pentapeptide MXKDX repeat protein 55 107 7.9E-19 T 22-04-2016 IPR014299 Pentapeptide MXKDX repeat protein RPIC12D_RS01540 449a93016b0f465c7cc6a5bcbc26fb32 109 TIGRFAM TIGR02953 penta_MxKDx: pentapeptide MXKDX repeat protein 5 77 1.1E-23 T 22-04-2016 IPR014299 Pentapeptide MXKDX repeat protein RPIC12D_RS06495 def4754462fc02cc2545c9ff364212e1 139 SUPERFAMILY SSF110857 7 137 5.36E-28 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like RPIC12D_RS06495 def4754462fc02cc2545c9ff364212e1 139 Gene3D G3DSA:3.10.490.10 8 135 1.5E-28 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like RPIC12D_RS06495 def4754462fc02cc2545c9ff364212e1 139 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 9 132 1.1E-20 T 22-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like RPIC12D_RS12200 fdf02981a5159e797d07ddfb6ad57a75 54 TIGRFAM TIGR02973 nitrate_rd_NapE: periplasmic nitrate reductase, NapE protein 12 53 3.4E-23 T 22-04-2016 IPR004448 Nitrate reductas, NapE, periplasmic RPIC12D_RS12200 fdf02981a5159e797d07ddfb6ad57a75 54 Pfam PF06796 Periplasmic nitrate reductase protein NapE 3 54 2.4E-24 T 22-04-2016 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE RPIC12D_RS07560 0e1306d71b1cca8983d17ad7eb896fdd 285 Pfam PF13503 Domain of unknown function (DUF4123) 11 123 1.6E-16 T 22-04-2016 IPR025391 Domain of unknown function DUF4123 RPIC12D_RS09615 9b5ffa9f22b1499e6a087053b1d75258 174 Pfam PF06271 RDD family 20 168 3.6E-25 T 22-04-2016 IPR010432 RDD RPIC12D_RS00590 7a1c1ff8e0845be114ad44d2dda9dd1d 88 Pfam PF06945 Protein of unknown function (DUF1289) 31 77 2.9E-22 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 RPIC12D_RS00590 7a1c1ff8e0845be114ad44d2dda9dd1d 88 PANTHER PTHR35175:SF2 2 78 4.2E-20 T 22-04-2016 RPIC12D_RS00590 7a1c1ff8e0845be114ad44d2dda9dd1d 88 PANTHER PTHR35175 2 78 4.2E-20 T 22-04-2016 RPIC12D_RS11365 2bfc7879a6ad9403e17e326e8f6b4fe5 344 PIRSF PIRSF029202 30 344 1.0E-76 T 22-04-2016 IPR020049 Protein of unknown function DUF2184 RPIC12D_RS11365 2bfc7879a6ad9403e17e326e8f6b4fe5 344 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 101 344 2.0E-78 T 22-04-2016 IPR020049 Protein of unknown function DUF2184 RPIC12D_RS06915 5ee51cdeb186d6651d6826b337a255be 256 Pfam PF05988 Bacterial protein of unknown function (DUF899) 3 252 6.6E-95 T 22-04-2016 IPR010296 Protein of unknown function DUF899, thioredoxin-like RPIC12D_RS06915 5ee51cdeb186d6651d6826b337a255be 256 SUPERFAMILY SSF52833 52 153 9.51E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS06915 5ee51cdeb186d6651d6826b337a255be 256 Gene3D G3DSA:3.40.30.10 84 173 3.8E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC12D_RS16930 6905ec000e0533758390245badb5d2f7 172 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 4 124 2.0E-7 T 22-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase RPIC12D_RS17125 d41a182368b079a1647dc0fcdb6498e1 153 Pfam PF12276 Protein of unknown function (DUF3617) 6 152 1.0E-19 T 22-04-2016 IPR022061 Protein of unknown function DUF3617 RPIC12D_RS12000 1850e8b92b8f8ac505869b9b0e5c53c4 239 PANTHER PTHR39188 22 226 1.1E-16 T 22-04-2016 RPIC12D_RS12000 1850e8b92b8f8ac505869b9b0e5c53c4 239 PANTHER PTHR39188:SF1 22 226 1.1E-16 T 22-04-2016 RPIC12D_RS13105 a966726e924661421ba8706405995573 224 Gene3D G3DSA:3.30.460.10 78 127 7.7E-4 T 22-04-2016 RPIC12D_RS10510 b8c748bf979ab75fa130668b454ddf7f 577 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 40 400 2.2E-23 T 22-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 RPIC12D_RS10510 b8c748bf979ab75fa130668b454ddf7f 577 SUPERFAMILY SSF53649 189 289 8.88E-38 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RPIC12D_RS10510 b8c748bf979ab75fa130668b454ddf7f 577 SUPERFAMILY SSF53649 341 556 8.88E-38 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RPIC12D_RS10510 b8c748bf979ab75fa130668b454ddf7f 577 SUPERFAMILY SSF53649 33 114 8.88E-38 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RPIC12D_RS10510 b8c748bf979ab75fa130668b454ddf7f 577 Gene3D G3DSA:3.40.720.10 38 113 5.3E-23 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RPIC12D_RS10510 b8c748bf979ab75fa130668b454ddf7f 577 Gene3D G3DSA:3.40.720.10 504 576 5.3E-23 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RPIC12D_RS10510 b8c748bf979ab75fa130668b454ddf7f 577 Gene3D G3DSA:3.40.720.10 188 375 5.3E-23 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RPIC12D_RS14145 c836ed615996fc1538312cc111b3bda7 244 Gene3D G3DSA:3.40.50.1010 1 88 2.0E-39 T 22-04-2016 IPR029060 PIN domain-like RPIC12D_RS14145 c836ed615996fc1538312cc111b3bda7 244 Gene3D G3DSA:3.40.50.1010 138 227 2.0E-39 T 22-04-2016 IPR029060 PIN domain-like RPIC12D_RS14145 c836ed615996fc1538312cc111b3bda7 244 Pfam PF01936 NYN domain 153 208 1.4E-10 T 22-04-2016 IPR021139 NYN domain, limkain-b1-type RPIC12D_RS09985 5b5a68780647d0a191900291afc852d0 98 Pfam PF06803 Protein of unknown function (DUF1232) 36 68 7.2E-12 T 22-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 RPIC12D_RS15965 7b75695938ebf1603aa49f695ab725bc 799 Pfam PF04773 FecR protein 85 174 2.5E-4 T 22-04-2016 IPR006860 FecR protein RPIC12D_RS02690 b03ca9b5237b451598ea7665a1521a93 432 Pfam PF09594 Protein of unknown function (DUF2029) 103 331 1.9E-38 T 22-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 RPIC12D_RS01065 cb44ebc2ba1b045179ddb457aa008738 85 Pfam PF04380 Membrane fusogenic activity 1 75 1.4E-30 T 22-04-2016 IPR007475 Membrane fusogenic activity RPIC12D_RS01065 cb44ebc2ba1b045179ddb457aa008738 85 PANTHER PTHR38040 1 84 6.1E-21 T 22-04-2016 RPIC12D_RS01065 cb44ebc2ba1b045179ddb457aa008738 85 PANTHER PTHR38040:SF1 1 84 6.1E-21 T 22-04-2016 RPIC12D_RS15055 b71c1ea9f999ef4dfeb388ee0b28c058 348 Gene3D G3DSA:2.40.160.10 27 348 6.3E-76 T 22-04-2016 IPR023614 Porin domain RPIC12D_RS15055 b71c1ea9f999ef4dfeb388ee0b28c058 348 Pfam PF13609 Gram-negative porin 14 323 4.0E-43 T 22-04-2016 RPIC12D_RS15055 b71c1ea9f999ef4dfeb388ee0b28c058 348 SUPERFAMILY SSF56935 27 348 3.97E-68 T 22-04-2016 RPIC12D_RS15055 b71c1ea9f999ef4dfeb388ee0b28c058 348 PRINTS PR00184 Neisseria sp. porin signature 61 86 1.0E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS15055 b71c1ea9f999ef4dfeb388ee0b28c058 348 PRINTS PR00184 Neisseria sp. porin signature 262 286 1.0E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC12D_RS05435 2b39d3537ab2f96626511f2546e1030b 398 Pfam PF06804 NlpB/DapX lipoprotein 47 392 9.1E-52 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein RPIC12D_RS01055 e9613d1138ab52a5a2f13c0d5c8f55e3 292 Pfam PF01078 Magnesium chelatase, subunit ChlI 200 292 7.2E-37 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain RPIC12D_RS01055 e9613d1138ab52a5a2f13c0d5c8f55e3 292 SUPERFAMILY SSF52540 197 291 2.75E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01055 e9613d1138ab52a5a2f13c0d5c8f55e3 292 SUPERFAMILY SSF54211 10 177 2.12E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC12D_RS01055 e9613d1138ab52a5a2f13c0d5c8f55e3 292 PANTHER PTHR32039:SF7 1 291 4.8E-124 T 22-04-2016 IPR004482 Mg chelatase-related protein RPIC12D_RS01055 e9613d1138ab52a5a2f13c0d5c8f55e3 292 Gene3D G3DSA:3.30.230.10 9 177 6.3E-28 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC12D_RS01055 e9613d1138ab52a5a2f13c0d5c8f55e3 292 Gene3D G3DSA:3.40.50.300 199 292 6.0E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS01055 e9613d1138ab52a5a2f13c0d5c8f55e3 292 PANTHER PTHR32039 1 291 4.8E-124 T 22-04-2016 RPIC12D_RS01055 e9613d1138ab52a5a2f13c0d5c8f55e3 292 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 132 1.3E-44 T 22-04-2016 RPIC12D_RS11145 cf32827c0fc9adab35e7bc61b8fdcbc0 141 Pfam PF10667 Protein of unknown function (DUF2486) 29 135 8.0E-5 T 22-04-2016 IPR018924 Protein of unknown function DUF2486 RPIC12D_RS02195 f1c83ddbc5f7d05fce381c4f401ace93 110 SUPERFAMILY SSF51182 13 110 1.57E-16 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC12D_RS02195 f1c83ddbc5f7d05fce381c4f401ace93 110 Pfam PF07883 Cupin domain 49 110 6.2E-12 T 22-04-2016 IPR013096 Cupin 2, conserved barrel RPIC12D_RS02195 f1c83ddbc5f7d05fce381c4f401ace93 110 Gene3D G3DSA:2.60.120.10 16 107 9.1E-16 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC12D_RS10640 cce65d44332b31be0f0ea1fc76a55ef1 252 Pfam PF03988 Repeat of Unknown Function (DUF347) 18 67 2.0E-17 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RPIC12D_RS10640 cce65d44332b31be0f0ea1fc76a55ef1 252 Pfam PF03988 Repeat of Unknown Function (DUF347) 138 188 9.3E-16 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RPIC12D_RS10640 cce65d44332b31be0f0ea1fc76a55ef1 252 Pfam PF03988 Repeat of Unknown Function (DUF347) 193 238 1.4E-9 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RPIC12D_RS10640 cce65d44332b31be0f0ea1fc76a55ef1 252 Pfam PF03988 Repeat of Unknown Function (DUF347) 73 121 2.0E-14 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RPIC12D_RS06280 767c7f8345d913a9afa9d255a0b19272 248 Pfam PF00877 NlpC/P60 family 70 177 1.7E-27 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC12D_RS06280 767c7f8345d913a9afa9d255a0b19272 248 Gene3D G3DSA:3.90.1720.10 59 181 1.7E-42 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC12D_RS06280 767c7f8345d913a9afa9d255a0b19272 248 PANTHER PTHR21666 65 186 7.9E-37 T 22-04-2016 RPIC12D_RS06280 767c7f8345d913a9afa9d255a0b19272 248 SUPERFAMILY SSF54001 56 179 3.92E-40 T 22-04-2016 RPIC12D_RS12520 5c022a8e619eaba3ffea24277e4bab78 243 PANTHER PTHR30249 1 241 1.1E-92 T 22-04-2016 RPIC12D_RS12520 5c022a8e619eaba3ffea24277e4bab78 243 PANTHER PTHR30249:SF5 1 241 1.1E-92 T 22-04-2016 RPIC12D_RS12520 5c022a8e619eaba3ffea24277e4bab78 243 Pfam PF04172 LrgB-like family 26 238 5.7E-81 T 22-04-2016 IPR007300 CidB/LrgB family RPIC12D_RS13265 9529933c80011a827a0de3c33b9653c3 288 PANTHER PTHR10869 96 286 5.6E-81 T 22-04-2016 RPIC12D_RS13265 9529933c80011a827a0de3c33b9653c3 288 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 176 280 9.0E-17 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 RPIC12D_RS13265 9529933c80011a827a0de3c33b9653c3 288 SMART SM00702 96 280 2.7E-49 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 RPIC12D_RS07375 de483566c07ccb85bd7aaafb916ae4c9 271 PANTHER PTHR17985:SF8 2 249 1.6E-72 T 22-04-2016 RPIC12D_RS07375 de483566c07ccb85bd7aaafb916ae4c9 271 PANTHER PTHR17985 2 249 1.6E-72 T 22-04-2016 IPR008551 Transport and Golgi organisation protein 2 RPIC12D_RS07375 de483566c07ccb85bd7aaafb916ae4c9 271 Pfam PF05742 Transport and Golgi organisation 2 1 249 1.4E-68 T 22-04-2016 IPR008551 Transport and Golgi organisation protein 2 RPIC12D_RS04960 4d68066f492cb655b3a9a3c4e518afbe 122 Pfam PF16137 Domain of unknown function (DUF4845) 36 117 1.5E-20 T 22-04-2016 IPR032314 Protein of unknown function DUF4845 RPIC12D_RS06005 090338f77b2c8715b82504f4cb6f9555 280 Gene3D G3DSA:3.90.1560.10 14 247 4.3E-57 T 22-04-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 RPIC12D_RS06005 090338f77b2c8715b82504f4cb6f9555 280 SUPERFAMILY SSF142823 8 244 1.12E-47 T 22-04-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 RPIC12D_RS06005 090338f77b2c8715b82504f4cb6f9555 280 Pfam PF04029 2-phosphosulpholactate phosphatase 27 241 4.3E-24 T 22-04-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 RPIC12D_RS15960 26462dc92acbb67b8ab94138755a828b 380 Pfam PF11738 Protein of unknown function (DUF3298) 292 368 4.0E-10 T 22-04-2016 IPR021729 Domain of unknown function DUF3298 RPIC12D_RS15960 26462dc92acbb67b8ab94138755a828b 380 Gene3D G3DSA:3.90.640.20 293 377 6.9E-12 T 22-04-2016 IPR021729 Domain of unknown function DUF3298 RPIC12D_RS14065 70ce7144438982574eed7c41088b98c6 74 Pfam PF09360 Iron-binding zinc finger CDGSH type 12 57 1.3E-17 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 RPIC12D_RS14065 70ce7144438982574eed7c41088b98c6 74 SMART SM00704 26 62 3.6E-11 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 RPIC12D_RS07370 e8341ee57c5e9edd64c57ca03c8de2c8 96 Pfam PF16290 Domain of unknown function (DUF4936) 6 91 1.8E-30 T 22-04-2016 IPR032556 Protein of unknown function DUF4936 RPIC12D_RS11405 18a1eb49cbb396dfbd2f2b03e407e630 116 Pfam PF10765 Protein of unknown function (DUF2591) 2 106 1.3E-22 T 22-04-2016 IPR019701 Bacteriophage P22, NinX RPIC12D_RS12710 ecd81e49c5757f0b5e0c73af40c5a21a 92 Pfam PF02583 Metal-sensitive transcriptional repressor 7 87 1.1E-21 T 22-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 RPIC12D_RS12710 ecd81e49c5757f0b5e0c73af40c5a21a 92 PANTHER PTHR33677 1 92 1.1E-22 T 22-04-2016 RPIC12D_RS09175 bddfdb1f13a3b050b2ce3cd490049417 95 Pfam PF03937 Flavinator of succinate dehydrogenase 18 79 4.0E-21 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase RPIC12D_RS09175 bddfdb1f13a3b050b2ce3cd490049417 95 Gene3D G3DSA:1.10.150.250 12 92 1.1E-23 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase RPIC12D_RS09175 bddfdb1f13a3b050b2ce3cd490049417 95 SUPERFAMILY SSF109910 11 89 4.32E-20 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase RPIC12D_RS15270 e9472979e90da5314a8af437ac239576 227 Pfam PF11356 Type II secretion system protein C 69 128 5.5E-7 T 22-04-2016 IPR024961 Type II secretion system protein C, N-terminal RPIC12D_RS05290 f4b0ff104e7167362b919b5f4f168f22 359 PIRSF PIRSF015283 1 353 6.1E-116 T 22-04-2016 IPR016631 Regulatory, RpfE RPIC12D_RS20235 258ced7461a372544128f2e220dfbc6e 187 PANTHER PTHR36931 145 187 3.4E-19 T 22-04-2016 RPIC12D_RS11415 bac149e81aad2c928ead49c75edd2f23 91 Pfam PF16786 Recombination enhancement, RecA-dependent nuclease 2 69 5.9E-11 T 22-04-2016 IPR031875 Recombination enhancement, RecA-dependent nuclease RPIC12D_RS15500 8ed91d4bf229095e9c1db1a3f0826afd 238 Gene3D G3DSA:3.90.70.10 80 191 1.3E-8 T 22-04-2016 RPIC12D_RS15500 8ed91d4bf229095e9c1db1a3f0826afd 238 Pfam PF03412 Peptidase C39 family 58 189 8.8E-23 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 RPIC12D_RS10195 5f26d62372ebe94f5c60fbaeedce9736 419 Pfam PF11170 Protein of unknown function (DUF2957) 65 416 3.6E-145 T 22-04-2016 IPR021340 Protein of unknown function DUF2957 RPIC12D_RS04005 c58bd5b779214103e5cb339b031f030d 440 Pfam PF13163 Protein of unknown function (DUF3999) 19 428 1.2E-116 T 22-04-2016 IPR025060 Protein of unknown function DUF3999 RPIC12D_RS03940 2e19e3d411555cf4e96911cc8cddab8b 765 Pfam PF05170 AsmA family 1 603 3.8E-110 T 22-04-2016 IPR007844 AsmA RPIC12D_RS03940 2e19e3d411555cf4e96911cc8cddab8b 765 PANTHER PTHR30441 6 729 3.5E-102 T 22-04-2016 RPIC12D_RS03940 2e19e3d411555cf4e96911cc8cddab8b 765 PANTHER PTHR30441:SF2 6 729 3.5E-102 T 22-04-2016 RPIC12D_RS26900 b09c52e97a55a03a8ea10c5421407475 107 Pfam PF04982 HPP family 1 70 2.2E-17 T 22-04-2016 IPR007065 HPP RPIC12D_RS00310 e2f72e7bdc0f2ef326212166686cc7a2 300 Pfam PF13503 Domain of unknown function (DUF4123) 57 147 2.9E-8 T 22-04-2016 IPR025391 Domain of unknown function DUF4123 RPIC12D_RS10685 473959452b8e190895a60325b186d4e8 371 Gene3D G3DSA:2.120.10.30 331 356 9.2E-4 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like RPIC12D_RS10685 473959452b8e190895a60325b186d4e8 371 Gene3D G3DSA:2.120.10.30 229 260 9.2E-4 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like RPIC12D_RS10685 473959452b8e190895a60325b186d4e8 371 Gene3D G3DSA:2.120.10.30 91 150 9.2E-4 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like RPIC12D_RS10685 473959452b8e190895a60325b186d4e8 371 SUPERFAMILY SSF63829 89 207 6.41E-6 T 22-04-2016 RPIC12D_RS10685 473959452b8e190895a60325b186d4e8 371 SUPERFAMILY SSF63829 237 323 6.41E-6 T 22-04-2016 RPIC12D_RS09225 485e64e41b1434ff87c367a6b5bdd14f 132 SUPERFAMILY SSF103378 45 121 1.7E-5 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 RPIC12D_RS09225 485e64e41b1434ff87c367a6b5bdd14f 132 Gene3D G3DSA:3.30.1330.120 47 117 2.8E-5 T 22-04-2016 RPIC12D_RS09915 e57ae3da0337a88d46da04490b03e045 210 Pfam PF11180 Protein of unknown function (DUF2968) 26 202 2.7E-60 T 22-04-2016 IPR021350 Protein of unknown function DUF2968 RPIC12D_RS11625 b9dfa35a09252cf3620e3827ec23a785 311 PANTHER PTHR11795 1 310 1.2E-119 T 22-04-2016 RPIC12D_RS11625 b9dfa35a09252cf3620e3827ec23a785 311 PANTHER PTHR11795:SF371 1 310 1.2E-119 T 22-04-2016 RPIC12D_RS11625 b9dfa35a09252cf3620e3827ec23a785 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 295 6.6E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS03825 8acc90cbeb07f51905bb27f2db49d2b6 175 Pfam PF11780 Protein of unknown function (DUF3318) 34 162 3.5E-27 T 22-04-2016 IPR021751 Protein of unknown function DUF3318 RPIC12D_RS01670 88d9e2bff4aad183f67ccafa8b781a2d 227 Pfam PF03412 Peptidase C39 family 49 184 6.4E-24 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 RPIC12D_RS01670 88d9e2bff4aad183f67ccafa8b781a2d 227 Gene3D G3DSA:3.90.70.10 92 183 2.5E-13 T 22-04-2016 RPIC12D_RS06615 f03b356f74950f4e1f885a64754cbbc2 320 Pfam PF01112 Asparaginase 4 319 2.3E-119 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 RPIC12D_RS06615 f03b356f74950f4e1f885a64754cbbc2 320 PANTHER PTHR10188 1 320 1.1E-135 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 RPIC12D_RS06615 f03b356f74950f4e1f885a64754cbbc2 320 SUPERFAMILY SSF56235 185 318 2.5E-96 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS06615 f03b356f74950f4e1f885a64754cbbc2 320 SUPERFAMILY SSF56235 3 155 2.5E-96 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC12D_RS06615 f03b356f74950f4e1f885a64754cbbc2 320 PANTHER PTHR10188:SF22 1 320 1.1E-135 T 22-04-2016 RPIC12D_RS07565 8a14d3f56b8f5f4be0a666b16729c1f4 217 Pfam PF11745 Protein of unknown function (DUF3304) 17 147 1.1E-27 T 22-04-2016 IPR021733 Protein of unknown function DUF3304 RPIC12D_RS13170 a0bffc01ee0ed260906992994c00d233 385 Pfam PF15984 Bacterial collagen, middle region 98 294 9.3E-60 T 22-04-2016 IPR031929 Bacterial collagen-like protein, middle domain RPIC12D_RS14835 729890c488d81e2789f9014e2d13bff2 617 Pfam PF09909 Uncharacterized protein conserved in bacteria (DUF2138) 7 570 5.3E-234 T 22-04-2016 IPR018671 Protein of unknown function DUF2138 RPIC12D_RS09100 9a790040d2df7492630746be69f70993 165 Pfam PF02674 Colicin V production protein 6 148 1.8E-33 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 RPIC12D_RS09100 9a790040d2df7492630746be69f70993 165 PANTHER PTHR36926:SF1 4 142 1.1E-23 T 22-04-2016 RPIC12D_RS09100 9a790040d2df7492630746be69f70993 165 PANTHER PTHR36926 4 142 1.1E-23 T 22-04-2016 RPIC12D_RS04930 5e717eea27f71896172f5f74dd83690d 210 PANTHER PTHR38104 6 139 5.7E-12 T 22-04-2016 RPIC12D_RS04930 5e717eea27f71896172f5f74dd83690d 210 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 15 99 1.6E-18 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 RPIC12D_RS04930 5e717eea27f71896172f5f74dd83690d 210 SUPERFAMILY SSF89069 15 81 2.48E-13 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 RPIC12D_RS01425 fe4286c51dd8f2024b899062b720d6fe 109 Pfam PF07769 psiF repeat 37 67 1.3E-14 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat RPIC12D_RS01425 fe4286c51dd8f2024b899062b720d6fe 109 Pfam PF07769 psiF repeat 76 107 5.2E-12 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat RPIC12D_RS04045 737a293a62fb55f696010f7e980675b6 161 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 18 153 3.8E-19 T 22-04-2016 IPR009936 Protein of unknown function DUF1468 RPIC12D_RS03830 e68f27c5db0a75d4ea0e0404e37a8d31 125 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 12 124 2.3E-20 T 22-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III RPIC12D_RS06150 09a2607c5d3e67650396c6915902426c 77 Gene3D G3DSA:2.60.40.1120 40 75 9.3E-4 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain RPIC12D_RS13135 188c8a9d9a3f871378cf8190e8134ab2 372 Pfam PF11906 Protein of unknown function (DUF3426) 222 368 1.1E-39 T 22-04-2016 IPR021834 Protein of unknown function DUF3426 RPIC12D_RS10630 ac22a2776b16986cc2aa445e0c8e11bd 257 Pfam PF03988 Repeat of Unknown Function (DUF347) 74 124 1.8E-11 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RPIC12D_RS10630 ac22a2776b16986cc2aa445e0c8e11bd 257 Pfam PF03988 Repeat of Unknown Function (DUF347) 139 184 1.3E-9 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RPIC12D_RS10630 ac22a2776b16986cc2aa445e0c8e11bd 257 Pfam PF03988 Repeat of Unknown Function (DUF347) 20 70 2.5E-16 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RPIC12D_RS10630 ac22a2776b16986cc2aa445e0c8e11bd 257 Pfam PF03988 Repeat of Unknown Function (DUF347) 193 241 1.3E-11 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RPIC12D_RS14980 8f8f256cca63df31adc5702dd2808cb9 93 Pfam PF09928 Predicted small integral membrane protein (DUF2160) 4 92 6.1E-38 T 22-04-2016 IPR018678 Protein of unknown function DUF2160, transmembrane RPIC12D_RS12635 48c7ee0e7cd0678b102b2b6c75cd6ecf 357 Pfam PF06527 TniQ 13 155 9.9E-30 T 22-04-2016 IPR009492 TniQ RPIC12D_RS04175 9d9bedd26f0e4e40da3f6e8dba10845c 1260 Gene3D G3DSA:3.30.1330.60 1085 1127 1.6E-8 T 22-04-2016 IPR006665 OmpA-like domain RPIC12D_RS04175 9d9bedd26f0e4e40da3f6e8dba10845c 1260 Gene3D G3DSA:3.30.1330.60 1206 1237 1.6E-8 T 22-04-2016 IPR006665 OmpA-like domain RPIC12D_RS04175 9d9bedd26f0e4e40da3f6e8dba10845c 1260 Pfam PF05359 Domain of Unknown Function (DUF748) 617 768 2.2E-34 T 22-04-2016 IPR008023 Protein of unknown function DUF748 RPIC12D_RS04175 9d9bedd26f0e4e40da3f6e8dba10845c 1260 Pfam PF05359 Domain of Unknown Function (DUF748) 870 1016 1.7E-39 T 22-04-2016 IPR008023 Protein of unknown function DUF748 RPIC12D_RS04175 9d9bedd26f0e4e40da3f6e8dba10845c 1260 Pfam PF05359 Domain of Unknown Function (DUF748) 182 331 5.0E-24 T 22-04-2016 IPR008023 Protein of unknown function DUF748 RPIC12D_RS04175 9d9bedd26f0e4e40da3f6e8dba10845c 1260 Pfam PF05359 Domain of Unknown Function (DUF748) 400 544 1.9E-20 T 22-04-2016 IPR008023 Protein of unknown function DUF748 RPIC12D_RS17295 fd9826f257ee637b48ad53db8e12ddc7 79 Pfam PF14090 Helix-turn-helix domain 9 74 1.6E-23 T 22-04-2016 RPIC12D_RS12285 a94d301621e05d1a53914aabe1ff1d71 356 Pfam PF01594 Domain of unknown function DUF20 17 339 1.8E-53 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like RPIC12D_RS12285 a94d301621e05d1a53914aabe1ff1d71 356 PANTHER PTHR21716 14 356 5.0E-54 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like RPIC12D_RS08850 e8598bba7afc41b4589f0b67920bd2c6 205 Pfam PF04366 Las17-binding protein actin regulator 118 204 3.1E-14 T 22-04-2016 IPR007461 Ysc84 actin-binding domain RPIC12D_RS07490 936c7a564d0f59bf81fcb0afd94269e7 444 PANTHER PTHR30482 4 372 5.9E-57 T 22-04-2016 RPIC12D_RS07490 936c7a564d0f59bf81fcb0afd94269e7 444 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 332 2.7E-30 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC12D_RS14175 fd568c1273cfc1ea3d877a60064df46e 240 Pfam PF16473 3' exoribonuclease, RNase T-like 94 238 1.7E-7 T 22-04-2016 IPR033390 3'-5' exoribonuclease Rv2179c-like domain RPIC12D_RS16365 3b3426656e3176ff97c4e04e000df2a9 268 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 24 268 1.0E-77 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 RPIC12D_RS16365 3b3426656e3176ff97c4e04e000df2a9 268 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 44 268 1.1E-70 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 RPIC12D_RS13285 5d5623a2816e6dc583285bb29e75de49 210 Pfam PF08750 CNP1-like family 44 200 4.8E-49 T 22-04-2016 IPR014861 Uncharacterised domain CNP1 RPIC12D_RS03425 c3bebde015b408085233b80f5f476dbc 316 Pfam PF06834 TraU protein 35 304 3.6E-74 T 22-04-2016 IPR009649 TraU RPIC12D_RS03425 c3bebde015b408085233b80f5f476dbc 316 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 30 314 4.7E-136 T 22-04-2016 IPR026331 Integrating conjugative element protein PFL_4710 RPIC12D_RS03545 d2bb32939c8e7eed624c6774174b0ae3 134 SUPERFAMILY SSF54523 8 117 4.55E-13 T 22-04-2016 RPIC12D_RS09810 64df725e43d4013a3f7ce56a4ce251de 145 Pfam PF12779 YXWGXW repeat (2 copies) 54 76 3.4E-6 T 22-04-2016 IPR024447 YXWGXW repeat RPIC12D_RS03290 1cc693cea3bf62eb8237e52dbcca3eac 121 Pfam PF11284 Protein of unknown function (DUF3085) 22 112 7.7E-35 T 22-04-2016 IPR021436 Protein of unknown function DUF3085 RPIC12D_RS26905 36141668adbab3089c2c9ee77b8a9178 70 Pfam PF04982 HPP family 33 70 1.1E-13 T 22-04-2016 IPR007065 HPP RPIC12D_RS26960 e5b57b2dca7a112235af7756aac82720 145 Pfam PF01145 SPFH domain / Band 7 family 1 78 8.4E-9 T 22-04-2016 IPR001107 Band 7 domain RPIC12D_RS11375 070591613626a8a2c4ba442d79e74798 434 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 13 176 1.7E-51 T 22-04-2016 IPR016913 Uncharacterised conserved protein UCP029215 RPIC12D_RS16295 1ce7bb1ebe7ce2937ed093bb0594ef4c 320 Pfam PF09828 Chromate resistance exported protein 185 313 2.0E-45 T 22-04-2016 IPR018634 Chromate resistance exported protein RPIC12D_RS16295 1ce7bb1ebe7ce2937ed093bb0594ef4c 320 Pfam PF08223 PaaX-like protein C-terminal domain 6 109 1.7E-5 T 22-04-2016 IPR013225 PaaX-like, C-terminal UniPathway: UPA00930 RPIC12D_RS22700 72a6caed20a319bba76a981f858a15fc 361 Pfam PF04966 Carbohydrate-selective porin, OprB family 71 361 2.0E-42 T 22-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS11355 d2f45b8db0195ae43e3445dee77c3d10 128 Pfam PF13262 Protein of unknown function (DUF4054) 7 119 1.8E-31 T 22-04-2016 IPR025127 Protein of unknown function DUF4054 RPIC12D_RS02245 ff0a06e7b964fce6078fca07821c3d5a 102 Pfam PF04341 Protein of unknown function, DUF485 11 97 1.6E-34 T 22-04-2016 IPR007436 Protein of unknown function DUF485 RPIC12D_RS02245 ff0a06e7b964fce6078fca07821c3d5a 102 PANTHER PTHR38598 2 102 4.1E-38 T 22-04-2016 RPIC12D_RS12595 67a9e2e0897c49b7fe4e6ba5920ce8e6 420 TIGRFAM TIGR04474 tcm_partner: three-Cys-motif partner protein 18 293 2.5E-67 T 22-04-2016 IPR031009 Three-Cys-motif partner protein RPIC12D_RS27040 630b0eab427e705f9291cfb9cd3d0356 203 Pfam PF05488 PAAR motif 11 73 2.2E-6 T 22-04-2016 IPR008727 PAAR motif RPIC12D_RS24905 47284efaf37ec4438a0af2cecc4d1b8b 126 Pfam PF00350 Dynamin family 25 75 7.3E-7 T 22-04-2016 IPR022812 Dynamin superfamily RPIC12D_RS24905 47284efaf37ec4438a0af2cecc4d1b8b 126 SUPERFAMILY SSF52540 2 84 5.13E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS24905 47284efaf37ec4438a0af2cecc4d1b8b 126 Gene3D G3DSA:3.40.50.300 20 71 1.3E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC12D_RS16915 0cb34e63f46adaa5140ec1d534918a67 229 PANTHER PTHR38765 1 227 1.0E-25 T 22-04-2016 RPIC12D_RS16915 0cb34e63f46adaa5140ec1d534918a67 229 Pfam PF04340 Protein of unknown function, DUF484 2 227 1.9E-32 T 22-04-2016 IPR007435 Protein of unknown function DUF484 RPIC12D_RS03095 279edb51b9fd9cb88dde0e456ca84939 304 Pfam PF10938 YfdX protein 73 211 3.4E-36 T 22-04-2016 IPR021236 Uncharacterised protein family YfdX RPIC12D_RS02695 be68de4896a870cf4216a2d91d776d4c 344 Pfam PF09977 Putative Tad-like Flp pilus-assembly 58 163 8.9E-13 T 22-04-2016 IPR018705 Domain of unknown function DUF2134, membrane RPIC12D_RS09610 06470460d8ab73b5115c1768b4c007aa 282 Pfam PF11304 Protein of unknown function (DUF3106) 79 178 1.3E-31 T 22-04-2016 IPR021455 Protein of unknown function DUF3106 RPIC12D_RS07575 96b5635f2155a9159c8730f97ff86325 217 Pfam PF11745 Protein of unknown function (DUF3304) 17 148 1.8E-31 T 22-04-2016 IPR021733 Protein of unknown function DUF3304 RPIC12D_RS13150 6187253b442d8b066addc289eddb2749 155 PANTHER PTHR35603 4 153 1.3E-17 T 22-04-2016 RPIC12D_RS20490 2908422e7a74a956d4bb6e22cbf35d65 64 Pfam PF11072 Protein of unknown function (DUF2859) 1 64 2.9E-12 T 22-04-2016 IPR021300 Integrating conjugative element protein, PFL4695 RPIC12D_RS14120 6efed79198ffc243bd09376dbad07990 372 Pfam PF04966 Carbohydrate-selective porin, OprB family 100 371 2.6E-21 T 22-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 RPIC12D_RS02680 0239f47e9e73ee7d1e323958f9caba29 142 Pfam PF04138 GtrA-like protein 29 141 4.1E-18 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 RPIC12D_RS17610 15c41f45e0eb10007b1aac40af1ab22e 65 Pfam PF01061 ABC-2 type transporter 7 65 1.2E-8 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RPIC12D_RS13430 2187d7abd69fdd0e868f32f0387e02e9 183 Pfam PF07285 Protein of unknown function (DUF1444) 15 155 2.0E-6 T 22-04-2016 IPR010838 Protein of unknown unction DUF1444 RPIC12D_RS03925 5521cb605d7e45e29eb5f59aedf9129a 161 Pfam PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase 14 156 4.6E-36 T 22-04-2016 IPR024651 FAD-containing D-sorbitol dehydrogenase small subunit RPIC12D_RS16350 ebd52a13bd44a77bde707fe88866faa1 151 Pfam PF12883 Protein of unknown function (DUF3828) 32 146 9.3E-12 T 22-04-2016 IPR024289 Domain of unknown function DUF3828 RPIC12D_RS01190 975147d6348b1c08f12563bfe57656af 70 Pfam PF11174 Protein of unknown function (DUF2970) 14 69 1.6E-25 T 22-04-2016 IPR021344 Protein of unknown function DUF2970 RPIC12D_RS03880 292ed6218185dbba8892ab7de50a870a 68 Pfam PF11278 Protein of unknown function (DUF3079) 1 51 1.8E-34 T 22-04-2016 IPR021430 Protein of unknown function DUF3079 RPIC12D_RS02460 31393e717206d62ce495e1e0971dc5a4 262 Pfam PF06299 Protein of unknown function (DUF1045) 80 238 8.1E-49 T 22-04-2016 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 RPIC12D_RS17010 784fddc45f9be5fc5d8d8cbec696f25e 71 Pfam PF14375 Cysteine-rich CWC 10 58 3.7E-6 T 22-04-2016 IPR032720 Cysteine-rich CWC RPIC12D_RS01360 77ee199aa5c2b7e9efd54cf4c3fd8d38 212 Pfam PF13511 Domain of unknown function (DUF4124) 20 72 1.6E-5 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 RPIC12D_RS11285 c69c7c405308023af181351742d463a2 219 Pfam PF11041 Protein of unknown function (DUF2612) 7 187 4.3E-57 T 22-04-2016 IPR021283 Protein of unknown function DUF2612 RPIC12D_RS15590 18d394628fa95e81aea1fe36fa9839d2 602 Pfam PF13910 Domain of unknown function (DUF4209) 531 593 1.3E-8 T 22-04-2016 IPR025209 Domain of unknown function DUF4209 RPIC12D_RS03310 9e7673a63e270bcf7853f12eefb254e6 275 Pfam PF06067 Domain of unknown function (DUF932) 37 264 7.3E-61 T 22-04-2016 IPR026325 Protein of unknown function DUF932 RPIC12D_RS02135 b7deb31e9d83baa6c1c35f89538abc1f 305 Pfam PF07608 Protein of unknown function (DUF1571) 104 305 5.6E-48 T 22-04-2016 IPR011465 Protein of unknown function DUF1571 RPIC12D_RS14055 55552a49bf60b01b91f9298ade6b5016 107 Pfam PF12778 PXPV repeat (3 copies) 47 65 0.005 T 22-04-2016 IPR024446 PXPV repeat RPIC12D_RS14055 55552a49bf60b01b91f9298ade6b5016 107 Pfam PF12778 PXPV repeat (3 copies) 32 52 1.2E-4 T 22-04-2016 IPR024446 PXPV repeat