locus-tag class description RPIC_RS00005 PF00308 Bacterial dnaA protein RPIC_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix RPIC_RS00005 PF11638 DnaA N-terminal domain RPIC_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain RPIC_RS00010 PF02767 DNA polymerase III beta subunit, central domain RPIC_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain RPIC_RS00015 PF00204 DNA gyrase B RPIC_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus RPIC_RS00015 PF18053 DNA gyrase B subunit insert domain RPIC_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS00015 PF01751 Toprim domain RPIC_RS00020 PF02384 N-6 DNA Methylase RPIC_RS00020 PF12161 HsdM N-terminal domain RPIC_RS00035 PF13333 Integrase core domain RPIC_RS00035 PF00665 Integrase core domain RPIC_RS00035 PF13276 HTH-like domain RPIC_RS00040 PF01527 Transposase RPIC_RS00055 PF17287 POTRA domain RPIC_RS00055 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RPIC_RS00055 PF08479 POTRA domain, ShlB-type RPIC_RS00065 PF00392 Bacterial regulatory proteins, gntR family RPIC_RS00065 PF07729 FCD domain RPIC_RS00075 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS00080 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS00085 PF00005 ABC transporter RPIC_RS00090 PF01062 Bestrophin, RFP-TM, chloride channel RPIC_RS00105 PF00501 AMP-binding enzyme RPIC_RS00105 PF13193 AMP-binding enzyme C-terminal domain RPIC_RS00115 PF00583 Acetyltransferase (GNAT) family RPIC_RS00120 PF02627 Carboxymuconolactone decarboxylase family RPIC_RS00125 PF04542 Sigma-70 region 2 RPIC_RS00125 PF12680 SnoaL-like domain RPIC_RS00125 PF08281 Sigma-70, region 4 RPIC_RS00130 PF13426 PAS domain RPIC_RS00130 PF00072 Response regulator receiver domain RPIC_RS00130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS00140 PF00571 CBS domain RPIC_RS00140 PF00478 IMP dehydrogenase / GMP reductase domain RPIC_RS00155 PF06445 GyrI-like small molecule binding domain RPIC_RS00165 PF02773 S-adenosylmethionine synthetase, C-terminal domain RPIC_RS00165 PF02772 S-adenosylmethionine synthetase, central domain RPIC_RS00165 PF00438 S-adenosylmethionine synthetase, N-terminal domain RPIC_RS00175 PF03279 Bacterial lipid A biosynthesis acyltransferase RPIC_RS00180 PF01678 Diaminopimelate epimerase RPIC_RS00185 PF03976 Polyphosphate kinase 2 (PPK2) RPIC_RS00190 PF00156 Phosphoribosyl transferase domain RPIC_RS00195 PF03372 Endonuclease/Exonuclease/phosphatase family RPIC_RS00200 PF01118 Semialdehyde dehydrogenase, NAD binding domain RPIC_RS00210 PF02698 DUF218 domain RPIC_RS00220 PF07690 Major Facilitator Superfamily RPIC_RS00230 PF00106 short chain dehydrogenase RPIC_RS00240 PF00491 Arginase family RPIC_RS00245 PF00202 Aminotransferase class-III RPIC_RS00250 PF03466 LysR substrate binding domain RPIC_RS00250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS00260 PF13533 Biotin-lipoyl like RPIC_RS00265 PF00005 ABC transporter RPIC_RS00275 PF02321 Outer membrane efflux protein RPIC_RS00280 PF02558 Ketopantoate reductase PanE/ApbA RPIC_RS00280 PF08546 Ketopantoate reductase PanE/ApbA C terminal RPIC_RS00285 PF01171 PP-loop family RPIC_RS00290 PF14602 Hexapeptide repeat of succinyl-transferase RPIC_RS00290 PF12804 MobA-like NTP transferase domain RPIC_RS00290 PF00132 Bacterial transferase hexapeptide (six repeats) RPIC_RS00295 PF01380 SIS domain RPIC_RS00315 PF08240 Alcohol dehydrogenase GroES-like domain RPIC_RS00315 PF00107 Zinc-binding dehydrogenase RPIC_RS00320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS00320 PF03466 LysR substrate binding domain RPIC_RS00325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPIC_RS00325 PF00205 Thiamine pyrophosphate enzyme, central domain RPIC_RS00325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPIC_RS00350 PF00155 Aminotransferase class I and II RPIC_RS00355 PF12833 Helix-turn-helix domain RPIC_RS00355 PF01965 DJ-1/PfpI family RPIC_RS00360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPIC_RS00370 PF07690 Major Facilitator Superfamily RPIC_RS00375 PF02798 Glutathione S-transferase, N-terminal domain RPIC_RS00375 PF00043 Glutathione S-transferase, C-terminal domain RPIC_RS00380 PF06772 Bacterial low temperature requirement A protein (LtrA) RPIC_RS00420 PF00909 Ammonium Transporter Family RPIC_RS00430 PF02310 B12 binding domain RPIC_RS00430 PF01642 Methylmalonyl-CoA mutase RPIC_RS00435 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RPIC_RS00435 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RPIC_RS00440 PF02567 Phenazine biosynthesis-like protein RPIC_RS00460 PF01965 DJ-1/PfpI family RPIC_RS00465 PF00561 alpha/beta hydrolase fold RPIC_RS00470 PF13640 2OG-Fe(II) oxygenase superfamily RPIC_RS00470 PF18331 PKHD-type hydroxylase C-terminal domain RPIC_RS00480 PF07715 TonB-dependent Receptor Plug Domain RPIC_RS00480 PF00593 TonB dependent receptor RPIC_RS00485 PF00378 Enoyl-CoA hydratase/isomerase RPIC_RS00495 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC_RS00495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC_RS00495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC_RS00510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC_RS00510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC_RS00510 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC_RS00515 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPIC_RS00515 PF00364 Biotin-requiring enzyme RPIC_RS00515 PF00289 Biotin carboxylase, N-terminal domain RPIC_RS00515 PF02785 Biotin carboxylase C-terminal domain RPIC_RS00520 PF13193 AMP-binding enzyme C-terminal domain RPIC_RS00520 PF00501 AMP-binding enzyme RPIC_RS00545 PF00682 HMGL-like RPIC_RS00550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RPIC_RS00555 PF18140 Propionyl-coenzyme A carboxylase BT domain RPIC_RS00555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPIC_RS00555 PF00364 Biotin-requiring enzyme RPIC_RS00555 PF00289 Biotin carboxylase, N-terminal domain RPIC_RS00555 PF02785 Biotin carboxylase C-terminal domain RPIC_RS00560 PF04055 Radical SAM superfamily RPIC_RS00560 PF06968 Biotin and Thiamin Synthesis associated domain RPIC_RS00565 PF00378 Enoyl-CoA hydratase/isomerase RPIC_RS00575 PF01039 Carboxyl transferase domain RPIC_RS00585 PF13419 Haloacid dehalogenase-like hydrolase RPIC_RS00595 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC_RS00595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC_RS00595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC_RS00605 PF02803 Thiolase, C-terminal domain RPIC_RS00605 PF00108 Thiolase, N-terminal domain RPIC_RS00610 PF00484 Carbonic anhydrase RPIC_RS00615 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) RPIC_RS00620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC_RS00620 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC_RS00620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC_RS00625 PF13411 MerR HTH family regulatory protein RPIC_RS00635 PF03992 Antibiotic biosynthesis monooxygenase RPIC_RS00645 PF00106 short chain dehydrogenase RPIC_RS00650 PF13462 Thioredoxin RPIC_RS00660 PF00750 tRNA synthetases class I (R) RPIC_RS00660 PF05746 DALR anticodon binding domain RPIC_RS00660 PF03485 Arginyl tRNA synthetase N terminal domain RPIC_RS00685 PF17200 Single Cache domain 2 RPIC_RS00685 PF07730 Histidine kinase RPIC_RS00695 PF00072 Response regulator receiver domain RPIC_RS00695 PF04397 LytTr DNA-binding domain RPIC_RS00700 PF00072 Response regulator receiver domain RPIC_RS00700 PF00196 Bacterial regulatory proteins, luxR family RPIC_RS00710 PF00809 Pterin binding enzyme RPIC_RS00710 PF02965 Vitamin B12 dependent methionine synthase, activation domain RPIC_RS00710 PF02607 B12 binding domain RPIC_RS00710 PF02310 B12 binding domain RPIC_RS00710 PF02574 Homocysteine S-methyltransferase RPIC_RS00720 PF02965 Vitamin B12 dependent methionine synthase, activation domain RPIC_RS00720 PF02607 B12 binding domain RPIC_RS00720 PF00809 Pterin binding enzyme RPIC_RS00720 PF02574 Homocysteine S-methyltransferase RPIC_RS00720 PF02310 B12 binding domain RPIC_RS00730 PF12091 Protein of unknown function (DUF3567) RPIC_RS00735 PF00561 alpha/beta hydrolase fold RPIC_RS00755 PF09339 IclR helix-turn-helix domain RPIC_RS00755 PF01614 Bacterial transcriptional regulator RPIC_RS00760 PF00296 Luciferase-like monooxygenase RPIC_RS00770 PF00378 Enoyl-CoA hydratase/isomerase RPIC_RS00785 PF00255 Glutathione peroxidase RPIC_RS00795 PF01467 Cytidylyltransferase-like RPIC_RS00805 PF03309 Type III pantothenate kinase RPIC_RS00810 PF02237 Biotin protein ligase C terminal domain RPIC_RS00810 PF03099 Biotin/lipoate A/B protein ligase family RPIC_RS00810 PF08279 HTH domain RPIC_RS00815 PF02405 Permease MlaE RPIC_RS00820 PF09383 NIL domain RPIC_RS00820 PF00005 ABC transporter RPIC_RS00840 PF07690 Major Facilitator Superfamily RPIC_RS00845 PF06276 Ferric iron reductase FhuF-like transporter RPIC_RS00845 PF04183 IucA / IucC family RPIC_RS00850 PF04185 Phosphoesterase family RPIC_RS00850 PF05506 Domain of unknown function (DUF756) RPIC_RS00860 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RPIC_RS00860 PF04055 Radical SAM superfamily RPIC_RS00865 PF03099 Biotin/lipoate A/B protein ligase family RPIC_RS00875 PF03466 LysR substrate binding domain RPIC_RS00875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS00880 PF04359 Protein of unknown function (DUF493) RPIC_RS00885 PF00768 D-alanyl-D-alanine carboxypeptidase RPIC_RS00885 PF07943 Penicillin-binding protein 5, C-terminal domain RPIC_RS00890 PF02129 X-Pro dipeptidyl-peptidase (S15 family) RPIC_RS00900 PF00375 Sodium:dicarboxylate symporter family RPIC_RS00905 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS00905 PF02743 Cache domain RPIC_RS00910 PF00158 Sigma-54 interaction domain RPIC_RS00910 PF00072 Response regulator receiver domain RPIC_RS00910 PF02954 Bacterial regulatory protein, Fis family RPIC_RS00920 PF00578 AhpC/TSA family RPIC_RS00925 PF01661 Macro domain RPIC_RS00935 PF01810 LysE type translocator RPIC_RS00940 PF01078 Magnesium chelatase, subunit ChlI RPIC_RS00940 PF13335 Magnesium chelatase, subunit ChlI C-terminal RPIC_RS00950 PF04380 Membrane fusogenic activity RPIC_RS00960 PF00543 Nitrogen regulatory protein P-II RPIC_RS00965 PF00909 Ammonium Transporter Family RPIC_RS00975 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RPIC_RS00975 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RPIC_RS00985 PF00381 PTS HPr component phosphorylation site RPIC_RS00990 PF05524 PEP-utilising enzyme, N-terminal RPIC_RS00990 PF00391 PEP-utilising enzyme, mobile domain RPIC_RS00990 PF02896 PEP-utilising enzyme, TIM barrel domain RPIC_RS01000 PF00210 Ferritin-like domain RPIC_RS01005 PF00899 ThiF family RPIC_RS01010 PF13180 PDZ domain RPIC_RS01010 PF03572 Peptidase family S41 RPIC_RS01015 PF00300 Histidine phosphatase superfamily (branch 1) RPIC_RS01020 PF00581 Rhodanese-like domain RPIC_RS01025 PF00462 Glutaredoxin RPIC_RS01030 PF02556 Preprotein translocase subunit SecB RPIC_RS01035 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RPIC_RS01035 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RPIC_RS01040 PF00588 SpoU rRNA Methylase family RPIC_RS01045 PF00156 Phosphoribosyl transferase domain RPIC_RS01050 PF08241 Methyltransferase domain RPIC_RS01060 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RPIC_RS01060 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RPIC_RS01065 PF00115 Cytochrome C and Quinol oxidase polypeptide I RPIC_RS01070 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 RPIC_RS01080 PF00510 Cytochrome c oxidase subunit III RPIC_RS01100 PF02628 Cytochrome oxidase assembly protein RPIC_RS01105 PF01040 UbiA prenyltransferase family RPIC_RS01110 PF02630 SCO1/SenC RPIC_RS01115 PF04545 Sigma-70, region 4 RPIC_RS01115 PF04542 Sigma-70 region 2 RPIC_RS01115 PF00140 Sigma-70 factor, region 1.2 RPIC_RS01120 PF03707 Bacterial signalling protein N terminal repeat RPIC_RS01120 PF00563 EAL domain RPIC_RS01120 PF00990 Diguanylate cyclase, GGDEF domain RPIC_RS01130 PF05726 Pirin C-terminal cupin domain RPIC_RS01130 PF02678 Pirin RPIC_RS01135 PF02885 Glycosyl transferase family, helical bundle domain RPIC_RS01140 PF00005 ABC transporter RPIC_RS01145 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS01155 PF03861 ANTAR domain RPIC_RS01155 PF08376 Nitrate and nitrite sensing RPIC_RS01160 PF01557 Fumarylacetoacetate (FAA) hydrolase family RPIC_RS01165 PF14497 Glutathione S-transferase, C-terminal domain RPIC_RS01165 PF02798 Glutathione S-transferase, N-terminal domain RPIC_RS01170 PF00448 SRP54-type protein, GTPase domain RPIC_RS01170 PF02881 SRP54-type protein, helical bundle domain RPIC_RS01175 PF00675 Insulinase (Peptidase family M16) RPIC_RS01175 PF05193 Peptidase M16 inactive domain RPIC_RS01180 PF05193 Peptidase M16 inactive domain RPIC_RS01190 PF01467 Cytidylyltransferase-like RPIC_RS01195 PF00037 4Fe-4S binding domain RPIC_RS01205 PF01195 Peptidyl-tRNA hydrolase RPIC_RS01210 PF01386 Ribosomal L25p family RPIC_RS01210 PF14693 Ribosomal protein TL5, C-terminal domain RPIC_RS01215 PF14572 Phosphoribosyl synthetase-associated domain RPIC_RS01215 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RPIC_RS01225 PF08544 GHMP kinases C terminal RPIC_RS01225 PF00288 GHMP kinases N terminal domain RPIC_RS01230 PF03550 Outer membrane lipoprotein LolB RPIC_RS01240 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RPIC_RS01240 PF06827 Zinc finger found in FPG and IleRS RPIC_RS01240 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RPIC_RS01250 PF00633 Helix-hairpin-helix motif RPIC_RS01250 PF14815 NUDIX domain RPIC_RS01250 PF00730 HhH-GPD superfamily base excision DNA repair protein RPIC_RS01250 PF10576 Iron-sulfur binding domain of endonuclease III RPIC_RS01260 PF03668 P-loop ATPase protein family RPIC_RS01270 PF07475 HPr Serine kinase C-terminal domain RPIC_RS01270 PF02603 HPr Serine kinase N terminus RPIC_RS01275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RPIC_RS01280 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RPIC_RS01285 PF04963 Sigma-54 factor, core binding domain RPIC_RS01285 PF00309 Sigma-54 factor, Activator interacting domain (AID) RPIC_RS01285 PF04552 Sigma-54, DNA binding domain RPIC_RS01290 PF00005 ABC transporter RPIC_RS01310 PF01380 SIS domain RPIC_RS01310 PF00571 CBS domain RPIC_RS01315 PF00999 Sodium/hydrogen exchanger family RPIC_RS01315 PF02080 TrkA-C domain RPIC_RS01315 PF02254 TrkA-N domain RPIC_RS01325 PF01965 DJ-1/PfpI family RPIC_RS01330 PF00156 Phosphoribosyl transferase domain RPIC_RS01335 PF01810 LysE type translocator RPIC_RS01345 PF17760 UvrA interaction domain RPIC_RS01345 PF17755 UvrA DNA-binding domain RPIC_RS01350 PF07690 Major Facilitator Superfamily RPIC_RS01355 PF00436 Single-strand binding protein family RPIC_RS01375 PF00990 Diguanylate cyclase, GGDEF domain RPIC_RS01375 PF00563 EAL domain RPIC_RS01375 PF13426 PAS domain RPIC_RS01390 PF08448 PAS fold RPIC_RS01390 PF00563 EAL domain RPIC_RS01390 PF08447 PAS fold RPIC_RS01390 PF00990 Diguanylate cyclase, GGDEF domain RPIC_RS01395 PF00158 Sigma-54 interaction domain RPIC_RS01395 PF02954 Bacterial regulatory protein, Fis family RPIC_RS01395 PF01590 GAF domain RPIC_RS01400 PF07995 Glucose / Sorbosone dehydrogenase RPIC_RS01410 PF12706 Beta-lactamase superfamily domain RPIC_RS01415 PF03070 TENA/THI-4/PQQC family RPIC_RS01420 PF05402 Coenzyme PQQ synthesis protein D (PqqD) RPIC_RS01425 PF04055 Radical SAM superfamily RPIC_RS01425 PF13186 Iron-sulfur cluster-binding domain RPIC_RS01430 PF00672 HAMP domain RPIC_RS01430 PF00989 PAS fold RPIC_RS01430 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS01430 PF18698 Histidine kinase sensor domain RPIC_RS01430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS01435 PF00072 Response regulator receiver domain RPIC_RS01435 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS01440 PF01292 Prokaryotic cytochrome b561 RPIC_RS01445 PF00174 Oxidoreductase molybdopterin binding domain RPIC_RS01455 PF02683 Cytochrome C biogenesis protein transmembrane region RPIC_RS01455 PF00578 AhpC/TSA family RPIC_RS01455 PF17991 Thioredoxin like C-terminal domain RPIC_RS01475 PF02801 Beta-ketoacyl synthase, C-terminal domain RPIC_RS01475 PF00109 Beta-ketoacyl synthase, N-terminal domain RPIC_RS01480 PF01522 Polysaccharide deacetylase RPIC_RS01485 PF03176 MMPL family RPIC_RS01500 PF07977 FabA-like domain RPIC_RS01540 PF07859 alpha/beta hydrolase fold RPIC_RS01550 PF01202 Shikimate kinase RPIC_RS01555 PF13193 AMP-binding enzyme C-terminal domain RPIC_RS01555 PF00501 AMP-binding enzyme RPIC_RS01585 PF14489 QueF-like protein RPIC_RS01585 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term RPIC_RS01590 PF00585 C-terminal regulatory domain of Threonine dehydratase RPIC_RS01590 PF00291 Pyridoxal-phosphate dependent enzyme RPIC_RS01595 PF07885 Ion channel RPIC_RS01595 PF17655 Inward rectifier potassium channel C-terminal domain RPIC_RS01600 PF07670 Nucleoside recognition RPIC_RS01605 PF09335 SNARE associated Golgi protein RPIC_RS01620 PF00005 ABC transporter RPIC_RS01620 PF06472 ABC transporter transmembrane region 2 RPIC_RS01630 PF01209 ubiE/COQ5 methyltransferase family RPIC_RS01645 PF03109 ABC1 family RPIC_RS01655 PF00474 Sodium:solute symporter family RPIC_RS01670 PF00152 tRNA synthetases class II (D, K and N) RPIC_RS01670 PF01336 OB-fold nucleic acid binding domain RPIC_RS01670 PF02938 GAD domain RPIC_RS01680 PF00293 NUDIX domain RPIC_RS01685 PF03372 Endonuclease/Exonuclease/phosphatase family RPIC_RS01690 PF13091 PLD-like domain RPIC_RS01695 PF01144 Coenzyme A transferase RPIC_RS01705 PF12806 Acetyl-CoA dehydrogenase C-terminal like RPIC_RS01705 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC_RS01705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC_RS01705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC_RS01710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RPIC_RS01710 PF00378 Enoyl-CoA hydratase/isomerase RPIC_RS01710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RPIC_RS01715 PF02803 Thiolase, C-terminal domain RPIC_RS01715 PF00108 Thiolase, N-terminal domain RPIC_RS01725 PF00378 Enoyl-CoA hydratase/isomerase RPIC_RS01730 PF03061 Thioesterase superfamily RPIC_RS01735 PF00005 ABC transporter RPIC_RS01735 PF00664 ABC transporter transmembrane region RPIC_RS01745 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RPIC_RS01745 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RPIC_RS01750 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC_RS01755 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS01760 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS01765 PF00005 ABC transporter RPIC_RS01770 PF13230 Glutamine amidotransferases class-II RPIC_RS01775 PF05161 MOFRL family RPIC_RS01775 PF13660 Domain of unknown function (DUF4147) RPIC_RS01780 PF01979 Amidohydrolase family RPIC_RS01795 PF00572 Ribosomal protein L13 RPIC_RS01800 PF00380 Ribosomal protein S9/S16 RPIC_RS01815 PF01521 Iron-sulphur cluster biosynthesis RPIC_RS01820 PF03702 Anhydro-N-acetylmuramic acid kinase RPIC_RS01825 PF00579 tRNA synthetases class I (W and Y) RPIC_RS01825 PF01479 S4 domain RPIC_RS01830 PF02580 D-Tyr-tRNA(Tyr) deacylase RPIC_RS01835 PF00300 Histidine phosphatase superfamily (branch 1) RPIC_RS01845 PF05496 Holliday junction DNA helicase RuvB P-loop domain RPIC_RS01845 PF05491 RuvB C-terminal winged helix domain RPIC_RS01845 PF17864 RuvB AAA lid domain RPIC_RS01850 PF07499 RuvA, C-terminal domain RPIC_RS01850 PF01330 RuvA N terminal domain RPIC_RS01855 PF03009 Glycerophosphoryl diester phosphodiesterase family RPIC_RS01860 PF02075 Crossover junction endodeoxyribonuclease RuvC RPIC_RS01865 PF02142 MGS-like domain RPIC_RS01865 PF01808 AICARFT/IMPCHase bienzyme RPIC_RS01870 PF02954 Bacterial regulatory protein, Fis family RPIC_RS01875 PF01207 Dihydrouridine synthase (Dus) RPIC_RS01880 PF01266 FAD dependent oxidoreductase RPIC_RS01885 PF01494 FAD binding domain RPIC_RS01890 PF05195 Aminopeptidase P, N-terminal domain RPIC_RS01890 PF00557 Metallopeptidase family M24 RPIC_RS01895 PF00563 EAL domain RPIC_RS01895 PF00990 Diguanylate cyclase, GGDEF domain RPIC_RS01895 PF03707 Bacterial signalling protein N terminal repeat RPIC_RS01900 PF00483 Nucleotidyl transferase RPIC_RS01915 PF01636 Phosphotransferase enzyme family RPIC_RS01920 PF04453 LPS transport system D RPIC_RS01925 PF09312 SurA N-terminal domain RPIC_RS01930 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RPIC_RS01935 PF00398 Ribosomal RNA adenine dimethylase RPIC_RS01945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPIC_RS01955 PF01553 Acyltransferase RPIC_RS01965 PF02092 Glycyl-tRNA synthetase beta subunit RPIC_RS01965 PF05746 DALR anticodon binding domain RPIC_RS01975 PF02091 Glycyl-tRNA synthetase alpha subunit RPIC_RS01980 PF00795 Carbon-nitrogen hydrolase RPIC_RS01985 PF00571 CBS domain RPIC_RS01985 PF03471 Transporter associated domain RPIC_RS01995 PF02130 Uncharacterized protein family UPF0054 RPIC_RS02000 PF02562 PhoH-like protein RPIC_RS02005 PF04055 Radical SAM superfamily RPIC_RS02005 PF00919 Uncharacterized protein family UPF0004 RPIC_RS02005 PF01938 TRAM domain RPIC_RS02030 PF13193 AMP-binding enzyme C-terminal domain RPIC_RS02030 PF00501 AMP-binding enzyme RPIC_RS02035 PF02803 Thiolase, C-terminal domain RPIC_RS02035 PF00108 Thiolase, N-terminal domain RPIC_RS02050 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC_RS02050 PF09317 Domain of unknown function (DUF1974) RPIC_RS02050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC_RS02050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC_RS02055 PF00440 Bacterial regulatory proteins, tetR family RPIC_RS02060 PF00270 DEAD/DEAH box helicase RPIC_RS02060 PF00271 Helicase conserved C-terminal domain RPIC_RS02065 PF01636 Phosphotransferase enzyme family RPIC_RS02070 PF05726 Pirin C-terminal cupin domain RPIC_RS02070 PF02678 Pirin RPIC_RS02075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS02075 PF03466 LysR substrate binding domain RPIC_RS02080 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS02080 PF00072 Response regulator receiver domain RPIC_RS02095 PF01494 FAD binding domain RPIC_RS02100 PF03466 LysR substrate binding domain RPIC_RS02100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS02110 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RPIC_RS02120 PF00743 Flavin-binding monooxygenase-like RPIC_RS02125 PF12697 Alpha/beta hydrolase family RPIC_RS02185 PF18766 SWI2/SNF2 ATPase RPIC_RS02185 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) RPIC_RS02185 PF12008 Type I restriction and modification enzyme - subunit R C terminal RPIC_RS02200 PF12161 HsdM N-terminal domain RPIC_RS02200 PF02384 N-6 DNA Methylase RPIC_RS02210 PF03432 Relaxase/Mobilisation nuclease domain RPIC_RS02250 PF03472 Autoinducer binding domain RPIC_RS02250 PF00196 Bacterial regulatory proteins, luxR family RPIC_RS02270 PF08946 Osmosensory transporter coiled coil RPIC_RS02270 PF00083 Sugar (and other) transporter RPIC_RS02275 PF04341 Protein of unknown function, DUF485 RPIC_RS02280 PF00474 Sodium:solute symporter family RPIC_RS02290 PF00929 Exonuclease RPIC_RS02300 PF08521 Two-component sensor kinase N-terminal RPIC_RS02300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS02300 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS02305 PF00072 Response regulator receiver domain RPIC_RS02305 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS02310 PF00154 recA bacterial DNA recombination protein RPIC_RS02315 PF02631 RecX family RPIC_RS02325 PF08442 ATP-grasp domain RPIC_RS02325 PF00549 CoA-ligase RPIC_RS02330 PF02629 CoA binding domain RPIC_RS02330 PF00549 CoA-ligase RPIC_RS02335 PF03741 Integral membrane protein TerC family RPIC_RS02340 PF00114 Pilin (bacterial filament) RPIC_RS02340 PF07963 Prokaryotic N-terminal methylation motif RPIC_RS02345 PF00114 Pilin (bacterial filament) RPIC_RS02345 PF07963 Prokaryotic N-terminal methylation motif RPIC_RS02350 PF11846 Virulence factor membrane-bound polymerase, C-terminal RPIC_RS02350 PF04932 O-Antigen ligase RPIC_RS02350 PF15864 Protein glycosylation ligase RPIC_RS02355 PF07963 Prokaryotic N-terminal methylation motif RPIC_RS02355 PF00114 Pilin (bacterial filament) RPIC_RS02360 PF01967 MoaC family RPIC_RS02365 PF01435 Peptidase family M48 RPIC_RS02375 PF00561 alpha/beta hydrolase fold RPIC_RS02385 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RPIC_RS02405 PF00892 EamA-like transporter family RPIC_RS02410 PF00162 Phosphoglycerate kinase RPIC_RS02415 PF00224 Pyruvate kinase, barrel domain RPIC_RS02415 PF02887 Pyruvate kinase, alpha/beta domain RPIC_RS02420 PF01116 Fructose-bisphosphate aldolase class-II RPIC_RS02425 PF01259 SAICAR synthetase RPIC_RS02430 PF00731 AIR carboxylase RPIC_RS02435 PF02222 ATP-grasp domain RPIC_RS02435 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RPIC_RS02440 PF01300 Telomere recombination RPIC_RS02440 PF03481 Putative GTP-binding controlling metal-binding RPIC_RS02445 PF03797 Autotransporter beta-domain RPIC_RS02445 PF00657 GDSL-like Lipase/Acylhydrolase RPIC_RS02450 PF03205 Molybdopterin guanine dinucleotide synthesis protein B RPIC_RS02455 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RPIC_RS02460 PF01068 ATP dependent DNA ligase domain RPIC_RS02460 PF04679 ATP dependent DNA ligase C terminal region RPIC_RS02460 PF13298 DNA polymerase Ligase (LigD) RPIC_RS02465 PF02735 Ku70/Ku80 beta-barrel domain RPIC_RS02470 PF07690 Major Facilitator Superfamily RPIC_RS02485 PF06299 Protein of unknown function (DUF1045) RPIC_RS02490 PF01979 Amidohydrolase family RPIC_RS02490 PF13382 Adenine deaminase C-terminal domain RPIC_RS02495 PF00990 Diguanylate cyclase, GGDEF domain RPIC_RS02495 PF03707 Bacterial signalling protein N terminal repeat RPIC_RS02495 PF00563 EAL domain RPIC_RS02500 PF17200 Single Cache domain 2 RPIC_RS02500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC_RS02500 PF00672 HAMP domain RPIC_RS02505 PF07690 Major Facilitator Superfamily RPIC_RS02510 PF01425 Amidase RPIC_RS02520 PF07729 FCD domain RPIC_RS02520 PF00392 Bacterial regulatory proteins, gntR family RPIC_RS02525 PF01494 FAD binding domain RPIC_RS02530 PF13458 Periplasmic binding protein RPIC_RS02545 PF01966 HD domain RPIC_RS02545 PF11871 Domain of unknown function (DUF3391) RPIC_RS02590 PF00155 Aminotransferase class I and II RPIC_RS02590 PF00392 Bacterial regulatory proteins, gntR family RPIC_RS02600 PF02470 MlaD protein RPIC_RS02605 PF04403 Paraquat-inducible protein A RPIC_RS02610 PF04403 Paraquat-inducible protein A RPIC_RS02620 PF00756 Putative esterase RPIC_RS02625 PF08240 Alcohol dehydrogenase GroES-like domain RPIC_RS02625 PF00107 Zinc-binding dehydrogenase RPIC_RS02630 PF02203 Tar ligand binding domain homologue RPIC_RS02630 PF00672 HAMP domain RPIC_RS02630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC_RS02640 PF00990 Diguanylate cyclase, GGDEF domain RPIC_RS02645 PF03992 Antibiotic biosynthesis monooxygenase RPIC_RS02650 PF01594 AI-2E family transporter RPIC_RS02655 PF03435 Saccharopine dehydrogenase NADP binding domain RPIC_RS02660 PF00463 Isocitrate lyase family RPIC_RS02665 PF07690 Major Facilitator Superfamily RPIC_RS02675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS02675 PF03466 LysR substrate binding domain RPIC_RS02680 PF01590 GAF domain RPIC_RS02680 PF00990 Diguanylate cyclase, GGDEF domain RPIC_RS02680 PF00360 Phytochrome region RPIC_RS02680 PF00563 EAL domain RPIC_RS02685 PF13460 NAD(P)H-binding RPIC_RS02690 PF03466 LysR substrate binding domain RPIC_RS02690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS02725 PF03466 LysR substrate binding domain RPIC_RS02725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS02745 PF00474 Sodium:solute symporter family RPIC_RS02750 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RPIC_RS02755 PF00465 Iron-containing alcohol dehydrogenase RPIC_RS02760 PF00701 Dihydrodipicolinate synthetase family RPIC_RS02770 PF01545 Cation efflux family RPIC_RS02780 PF09086 Domain of unknown function (DUF1924) RPIC_RS02795 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS02795 PF00072 Response regulator receiver domain RPIC_RS02800 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS02800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS02805 PF01545 Cation efflux family RPIC_RS02805 PF16916 Dimerisation domain of Zinc Transporter RPIC_RS02810 PF00166 Chaperonin 10 Kd subunit RPIC_RS02815 PF00118 TCP-1/cpn60 chaperonin family RPIC_RS02820 PF05987 Bacterial protein of unknown function (DUF898) RPIC_RS02860 PF00437 Type II/IV secretion system protein RPIC_RS02875 PF13629 Pilus formation protein N terminal region RPIC_RS02875 PF04972 BON domain RPIC_RS02875 PF00263 Bacterial type II and III secretion system protein RPIC_RS02920 PF00535 Glycosyl transferase family 2 RPIC_RS02940 PF02954 Bacterial regulatory protein, Fis family RPIC_RS02940 PF00158 Sigma-54 interaction domain RPIC_RS02940 PF00072 Response regulator receiver domain RPIC_RS02955 PF04011 LemA family RPIC_RS02965 PF00701 Dihydrodipicolinate synthetase family RPIC_RS02970 PF00202 Aminotransferase class-III RPIC_RS02975 PF00301 Rubredoxin RPIC_RS02980 PF00072 Response regulator receiver domain RPIC_RS02985 PF00072 Response regulator receiver domain RPIC_RS02995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC_RS02995 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term RPIC_RS03000 PF01584 CheW-like domain RPIC_RS03000 PF02895 Signal transducing histidine kinase, homodimeric domain RPIC_RS03000 PF01627 Hpt domain RPIC_RS03000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS03005 PF00875 DNA photolyase RPIC_RS03005 PF03441 FAD binding domain of DNA photolyase RPIC_RS03010 PF01479 S4 domain RPIC_RS03010 PF00849 RNA pseudouridylate synthase RPIC_RS03015 PF02622 Uncharacterized ACR, COG1678 RPIC_RS03020 PF03652 Holliday junction resolvase RPIC_RS03025 PF00156 Phosphoribosyl transferase domain RPIC_RS03030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RPIC_RS03030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RPIC_RS03035 PF01979 Amidohydrolase family RPIC_RS03040 PF01553 Acyltransferase RPIC_RS03045 PF00149 Calcineurin-like phosphoesterase RPIC_RS03055 PF00953 Glycosyl transferase family 4 RPIC_RS03065 PF00535 Glycosyl transferase family 2 RPIC_RS03080 PF00535 Glycosyl transferase family 2 RPIC_RS03090 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RPIC_RS03095 PF00132 Bacterial transferase hexapeptide (six repeats) RPIC_RS03105 PF04321 RmlD substrate binding domain RPIC_RS03110 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RPIC_RS03115 PF00483 Nucleotidyl transferase RPIC_RS03120 PF16363 GDP-mannose 4,6 dehydratase RPIC_RS03125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RPIC_RS03125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RPIC_RS03125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RPIC_RS03125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RPIC_RS03130 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RPIC_RS03135 PF00534 Glycosyl transferases group 1 RPIC_RS03135 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RPIC_RS03145 PF02321 Outer membrane efflux protein RPIC_RS03150 PF00899 ThiF family RPIC_RS03150 PF00581 Rhodanese-like domain RPIC_RS03160 PF08361 MAATS-type transcriptional repressor, C-terminal region RPIC_RS03160 PF00440 Bacterial regulatory proteins, tetR family RPIC_RS03165 PF03692 Putative zinc- or iron-chelating domain RPIC_RS03175 PF02673 Bacitracin resistance protein BacA RPIC_RS03180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RPIC_RS03185 PF02390 Putative methyltransferase RPIC_RS03200 PF00501 AMP-binding enzyme RPIC_RS03200 PF13193 AMP-binding enzyme C-terminal domain RPIC_RS03205 PF00171 Aldehyde dehydrogenase family RPIC_RS03210 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RPIC_RS03215 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain RPIC_RS03215 PF01464 Transglycosylase SLT domain RPIC_RS03220 PF00155 Aminotransferase class I and II RPIC_RS03225 PF01029 NusB family RPIC_RS03230 PF00885 6,7-dimethyl-8-ribityllumazine synthase RPIC_RS03235 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RPIC_RS03235 PF00925 GTP cyclohydrolase II RPIC_RS03240 PF00677 Lumazine binding domain RPIC_RS03245 PF01872 RibD C-terminal domain RPIC_RS03245 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RPIC_RS03290 PF05567 Neisseria PilC beta-propeller domain RPIC_RS03300 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor RPIC_RS03300 PF07963 Prokaryotic N-terminal methylation motif RPIC_RS03305 PF03477 ATP cone domain RPIC_RS03310 PF00464 Serine hydroxymethyltransferase RPIC_RS03315 PF00106 short chain dehydrogenase RPIC_RS03320 PF03061 Thioesterase superfamily RPIC_RS03325 PF01618 MotA/TolQ/ExbB proton channel family RPIC_RS03330 PF02472 Biopolymer transport protein ExbD/TolR RPIC_RS03340 PF07676 WD40-like Beta Propeller Repeat RPIC_RS03340 PF04052 TolB amino-terminal domain RPIC_RS03345 PF00691 OmpA family RPIC_RS03355 PF06508 Queuosine biosynthesis protein QueC RPIC_RS03360 PF04143 Sulphur transport RPIC_RS03375 PF00294 pfkB family carbohydrate kinase RPIC_RS03380 PF07690 Major Facilitator Superfamily RPIC_RS03385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RPIC_RS03385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RPIC_RS03390 PF00356 Bacterial regulatory proteins, lacI family RPIC_RS03400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC_RS03400 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RPIC_RS03405 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RPIC_RS03410 PF00293 NUDIX domain RPIC_RS03415 PF03649 Uncharacterised protein family (UPF0014) RPIC_RS03420 PF00005 ABC transporter RPIC_RS03440 PF05957 Bacterial protein of unknown function (DUF883) RPIC_RS03445 PF10417 C-terminal domain of 1-Cys peroxiredoxin RPIC_RS03445 PF00578 AhpC/TSA family RPIC_RS03450 PF00860 Permease family RPIC_RS03455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC_RS03455 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC_RS03455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC_RS03460 PF09339 IclR helix-turn-helix domain RPIC_RS03465 PF03301 Tryptophan 2,3-dioxygenase RPIC_RS03470 PF00266 Aminotransferase class-V RPIC_RS03475 PF04199 Putative cyclase RPIC_RS03480 PF01037 Lrp/AsnC ligand binding domain RPIC_RS03490 PF01613 Flavin reductase like domain RPIC_RS03495 PF01625 Peptide methionine sulfoxide reductase RPIC_RS03510 PF01243 Pyridoxamine 5'-phosphate oxidase RPIC_RS03510 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RPIC_RS03515 PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase RPIC_RS03520 PF00732 GMC oxidoreductase RPIC_RS03520 PF05199 GMC oxidoreductase RPIC_RS03525 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPIC_RS03525 PF00034 Cytochrome c RPIC_RS03530 PF05170 AsmA family RPIC_RS03535 PF00899 ThiF family RPIC_RS03545 PF01814 Hemerythrin HHE cation binding domain RPIC_RS03555 PF00085 Thioredoxin RPIC_RS03560 PF13193 AMP-binding enzyme C-terminal domain RPIC_RS03560 PF00501 AMP-binding enzyme RPIC_RS03570 PF04752 ChaC-like protein RPIC_RS03580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RPIC_RS03585 PF07152 YaeQ protein RPIC_RS03610 PF04264 YceI-like domain RPIC_RS03615 PF00749 tRNA synthetases class I (E and Q), catalytic domain RPIC_RS03615 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RPIC_RS03620 PF03280 Proteobacterial lipase chaperone protein RPIC_RS03625 PF00561 alpha/beta hydrolase fold RPIC_RS03630 PF01970 Tripartite tricarboxylate transporter TctA family RPIC_RS03635 PF07331 Tripartite tricarboxylate transporter TctB family RPIC_RS03645 PF02515 CoA-transferase family III RPIC_RS03650 PF02272 DHHA1 domain RPIC_RS03650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RPIC_RS03650 PF01411 tRNA synthetases class II (A) RPIC_RS03665 PF00593 TonB dependent receptor RPIC_RS03665 PF07715 TonB-dependent Receptor Plug Domain RPIC_RS03670 PF01145 SPFH domain / Band 7 family RPIC_RS03680 PF03466 LysR substrate binding domain RPIC_RS03680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS03685 PF06779 Uncharacterised MFS-type transporter YbfB RPIC_RS03690 PF00596 Class II Aldolase and Adducin N-terminal domain RPIC_RS03695 PF01361 Tautomerase enzyme RPIC_RS03700 PF01212 Beta-eliminating lyase RPIC_RS03705 PF00293 NUDIX domain RPIC_RS03705 PF13344 Haloacid dehalogenase-like hydrolase RPIC_RS03710 PF01206 Sulfurtransferase TusA RPIC_RS03715 PF01810 LysE type translocator RPIC_RS03725 PF00989 PAS fold RPIC_RS03725 PF00072 Response regulator receiver domain RPIC_RS03725 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC_RS03725 PF01627 Hpt domain RPIC_RS03725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS03725 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS03735 PF02753 Pili assembly chaperone PapD, C-terminal domain RPIC_RS03735 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RPIC_RS03740 PF00577 Outer membrane usher protein RPIC_RS03740 PF13953 PapC C-terminal domain RPIC_RS03740 PF13954 PapC N-terminal domain RPIC_RS03755 PF13419 Haloacid dehalogenase-like hydrolase RPIC_RS03770 PF00691 OmpA family RPIC_RS03775 PF03989 DNA gyrase C-terminal domain, beta-propeller RPIC_RS03775 PF00521 DNA gyrase/topoisomerase IV, subunit A RPIC_RS03785 PF00266 Aminotransferase class-V RPIC_RS03790 PF00800 Prephenate dehydratase RPIC_RS03790 PF01842 ACT domain RPIC_RS03790 PF01817 Chorismate mutase type II RPIC_RS03795 PF00155 Aminotransferase class I and II RPIC_RS03800 PF01842 ACT domain RPIC_RS03800 PF02153 Prephenate dehydrogenase RPIC_RS03805 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RPIC_RS03810 PF02224 Cytidylate kinase RPIC_RS03815 PF00575 S1 RNA binding domain RPIC_RS03820 PF00216 Bacterial DNA-binding protein RPIC_RS03830 PF18073 Rubredoxin metal binding domain RPIC_RS03835 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RPIC_RS03835 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RPIC_RS03835 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RPIC_RS03840 PF00294 pfkB family carbohydrate kinase RPIC_RS03845 PF01370 NAD dependent epimerase/dehydratase family RPIC_RS03855 PF00291 Pyridoxal-phosphate dependent enzyme RPIC_RS03860 PF13406 Transglycosylase SLT domain RPIC_RS03865 PF00850 Histone deacetylase domain RPIC_RS03870 PF09383 NIL domain RPIC_RS03870 PF00005 ABC transporter RPIC_RS03875 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS03880 PF03180 NLPA lipoprotein RPIC_RS03885 PF01012 Electron transfer flavoprotein domain RPIC_RS03890 PF00766 Electron transfer flavoprotein FAD-binding domain RPIC_RS03890 PF01012 Electron transfer flavoprotein domain RPIC_RS03895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC_RS03895 PF12806 Acetyl-CoA dehydrogenase C-terminal like RPIC_RS03895 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC_RS03895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC_RS03900 PF01266 FAD dependent oxidoreductase RPIC_RS03905 PF01037 Lrp/AsnC ligand binding domain RPIC_RS03915 PF04055 Radical SAM superfamily RPIC_RS03940 PF00886 Ribosomal protein S16 RPIC_RS03945 PF05239 PRC-barrel domain RPIC_RS03945 PF01782 RimM N-terminal domain RPIC_RS03950 PF01746 tRNA (Guanine-1)-methyltransferase RPIC_RS03955 PF01245 Ribosomal protein L19 RPIC_RS03960 PF00293 NUDIX domain RPIC_RS03965 PF03186 CobD/Cbib protein RPIC_RS03965 PF17113 Regulatory signalling modulator protein AmpE RPIC_RS03975 PF03193 RsgA GTPase RPIC_RS03980 PF01435 Peptidase family M48 RPIC_RS03985 PF00929 Exonuclease RPIC_RS03990 PF00994 Probable molybdopterin binding domain RPIC_RS03995 PF04751 Protein of unknown function (DUF615) RPIC_RS04000 PF01523 Putative modulator of DNA gyrase RPIC_RS04005 PF00186 Dihydrofolate reductase RPIC_RS04010 PF00303 Thymidylate synthase RPIC_RS04015 PF00291 Pyridoxal-phosphate dependent enzyme RPIC_RS04020 PF03741 Integral membrane protein TerC family RPIC_RS04025 PF10017 Histidine-specific methyltransferase, SAM-dependent RPIC_RS04030 PF03781 Sulfatase-modifying factor enzyme 1 RPIC_RS04030 PF12867 DinB superfamily RPIC_RS04035 PF00270 DEAD/DEAH box helicase RPIC_RS04035 PF00271 Helicase conserved C-terminal domain RPIC_RS04055 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC_RS04065 PF00005 ABC transporter RPIC_RS04065 PF16326 ABC transporter C-terminal domain RPIC_RS04065 PF12848 ABC transporter RPIC_RS04070 PF01751 Toprim domain RPIC_RS04070 PF00204 DNA gyrase B RPIC_RS04070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS04070 PF00986 DNA gyrase B subunit, carboxyl terminus RPIC_RS04075 PF01464 Transglycosylase SLT domain RPIC_RS04080 PF00521 DNA gyrase/topoisomerase IV, subunit A RPIC_RS04095 PF00324 Amino acid permease RPIC_RS04100 PF07690 Major Facilitator Superfamily RPIC_RS04105 PF00005 ABC transporter RPIC_RS04105 PF00664 ABC transporter transmembrane region RPIC_RS04110 PF02652 L-lactate permease RPIC_RS04115 PF01734 Patatin-like phospholipase RPIC_RS04130 PF00529 HlyD membrane-fusion protein of T1SS RPIC_RS04130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RPIC_RS04135 PF00873 AcrB/AcrD/AcrF family RPIC_RS04150 PF13417 Glutathione S-transferase, N-terminal domain RPIC_RS04150 PF00043 Glutathione S-transferase, C-terminal domain RPIC_RS04155 PF00155 Aminotransferase class I and II RPIC_RS04165 PF00892 EamA-like transporter family RPIC_RS04170 PF02272 DHHA1 domain RPIC_RS04170 PF01411 tRNA synthetases class II (A) RPIC_RS04170 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RPIC_RS04175 PF00155 Aminotransferase class I and II RPIC_RS04175 PF00392 Bacterial regulatory proteins, gntR family RPIC_RS04180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS04180 PF00183 Hsp90 protein RPIC_RS04210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC_RS04210 PF00672 HAMP domain RPIC_RS04210 PF02743 Cache domain RPIC_RS04240 PF13302 Acetyltransferase (GNAT) domain RPIC_RS04245 PF17862 AAA+ lid domain RPIC_RS04245 PF01434 Peptidase family M41 RPIC_RS04245 PF00004 ATPase family associated with various cellular activities (AAA) RPIC_RS04250 PF00034 Cytochrome c RPIC_RS04255 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPIC_RS04275 PF00881 Nitroreductase family RPIC_RS04280 PF00633 Helix-hairpin-helix motif RPIC_RS04280 PF10576 Iron-sulfur binding domain of endonuclease III RPIC_RS04280 PF00730 HhH-GPD superfamily base excision DNA repair protein RPIC_RS04285 PF04060 Putative Fe-S cluster RPIC_RS04290 PF00440 Bacterial regulatory proteins, tetR family RPIC_RS04290 PF17938 Tetracyclin repressor-like, C-terminal domain RPIC_RS04300 PF00155 Aminotransferase class I and II RPIC_RS04305 PF12344 Ultra-violet resistance protein B RPIC_RS04305 PF02151 UvrB/uvrC motif RPIC_RS04305 PF04851 Type III restriction enzyme, res subunit RPIC_RS04305 PF00271 Helicase conserved C-terminal domain RPIC_RS04305 PF17757 UvrB interaction domain RPIC_RS04315 PF00294 pfkB family carbohydrate kinase RPIC_RS04320 PF00356 Bacterial regulatory proteins, lacI family RPIC_RS04325 PF02653 Branched-chain amino acid transport system / permease component RPIC_RS04330 PF00005 ABC transporter RPIC_RS04335 PF13407 Periplasmic binding protein domain RPIC_RS04340 PF02082 Transcriptional regulator RPIC_RS04345 PF00266 Aminotransferase class-V RPIC_RS04350 PF01592 NifU-like N terminal domain RPIC_RS04355 PF01521 Iron-sulphur cluster biosynthesis RPIC_RS04365 PF07743 HSCB C-terminal oligomerisation domain RPIC_RS04365 PF00226 DnaJ domain RPIC_RS04370 PF00012 Hsp70 protein RPIC_RS04375 PF00111 2Fe-2S iron-sulfur cluster binding domain RPIC_RS04380 PF04384 Iron-sulphur cluster assembly RPIC_RS04390 PF00152 tRNA synthetases class II (D, K and N) RPIC_RS04390 PF01336 OB-fold nucleic acid binding domain RPIC_RS04395 PF00106 short chain dehydrogenase RPIC_RS04400 PF03462 PCRF domain RPIC_RS04400 PF00472 RF-1 domain RPIC_RS04405 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RPIC_RS04405 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RPIC_RS04410 PF02589 LUD domain RPIC_RS04420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RPIC_RS04420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RPIC_RS04425 PF02646 RmuC family RPIC_RS04435 PF03453 MoeA N-terminal region (domain I and II) RPIC_RS04435 PF00994 Probable molybdopterin binding domain RPIC_RS04435 PF03454 MoeA C-terminal region (domain IV) RPIC_RS04440 PF12804 MobA-like NTP transferase domain RPIC_RS04445 PF06463 Molybdenum Cofactor Synthesis C RPIC_RS04445 PF04055 Radical SAM superfamily RPIC_RS04450 PF00575 S1 RNA binding domain RPIC_RS04450 PF10150 Ribonuclease E/G family RPIC_RS04450 PF12111 Polyribonucleotide phosphorylase C terminal RPIC_RS04455 PF00849 RNA pseudouridylate synthase RPIC_RS04455 PF01479 S4 domain RPIC_RS04460 PF13419 Haloacid dehalogenase-like hydrolase RPIC_RS04470 PF06965 Na+/H+ antiporter 1 RPIC_RS04470 PF01343 Peptidase family S49 RPIC_RS04475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPIC_RS04480 PF02545 Maf-like protein RPIC_RS04490 PF01783 Ribosomal L32p protein family RPIC_RS04495 PF02504 Fatty acid synthesis protein RPIC_RS04500 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RPIC_RS04500 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RPIC_RS04505 PF00698 Acyl transferase domain RPIC_RS04515 PF00550 Phosphopantetheine attachment site RPIC_RS04520 PF00109 Beta-ketoacyl synthase, N-terminal domain RPIC_RS04520 PF02801 Beta-ketoacyl synthase, C-terminal domain RPIC_RS04525 PF08281 Sigma-70, region 4 RPIC_RS04525 PF04542 Sigma-70 region 2 RPIC_RS04540 PF13180 PDZ domain RPIC_RS04540 PF17820 PDZ domain RPIC_RS04550 PF00679 Elongation factor G C-terminus RPIC_RS04550 PF00009 Elongation factor Tu GTP binding domain RPIC_RS04550 PF03144 Elongation factor Tu domain 2 RPIC_RS04550 PF06421 GTP-binding protein LepA C-terminus RPIC_RS04555 PF10502 Signal peptidase, peptidase S26 RPIC_RS04565 PF00035 Double-stranded RNA binding motif RPIC_RS04565 PF14622 Ribonuclease-III-like RPIC_RS04570 PF01926 50S ribosome-binding GTPase RPIC_RS04570 PF07650 KH domain RPIC_RS04575 PF02565 Recombination protein O C terminal RPIC_RS04575 PF11967 Recombination protein O N terminal RPIC_RS04580 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RPIC_RS04585 PF01648 4'-phosphopantetheinyl transferase superfamily RPIC_RS04590 PF00933 Glycosyl hydrolase family 3 N terminal domain RPIC_RS04595 PF01132 Elongation factor P (EF-P) OB domain RPIC_RS04595 PF08207 Elongation factor P (EF-P) KOW-like domain RPIC_RS04595 PF09285 Elongation factor P, C-terminal RPIC_RS04605 PF08459 UvrC Helix-hairpin-helix N-terminal RPIC_RS04605 PF02151 UvrB/uvrC motif RPIC_RS04605 PF01541 GIY-YIG catalytic domain RPIC_RS04610 PF01066 CDP-alcohol phosphatidyltransferase RPIC_RS04635 PF00072 Response regulator receiver domain RPIC_RS04635 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS04645 PF00360 Phytochrome region RPIC_RS04645 PF08446 PAS fold RPIC_RS04645 PF01590 GAF domain RPIC_RS04645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS04655 PF00072 Response regulator receiver domain RPIC_RS04655 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS04665 PF07729 FCD domain RPIC_RS04665 PF00392 Bacterial regulatory proteins, gntR family RPIC_RS04670 PF13378 Enolase C-terminal domain-like RPIC_RS04670 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RPIC_RS04675 PF07690 Major Facilitator Superfamily RPIC_RS04680 PF16338 Domain of unknown function (DUF4968) RPIC_RS04680 PF17137 Domain of unknown function (DUF5110) RPIC_RS04680 PF13802 Galactose mutarotase-like RPIC_RS04680 PF01055 Glycosyl hydrolases family 31 RPIC_RS04685 PF13609 Gram-negative porin RPIC_RS04700 PF03466 LysR substrate binding domain RPIC_RS04700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS04705 PF03601 Conserved hypothetical protein 698 RPIC_RS04725 PF11953 Domain of unknown function (DUF3470) RPIC_RS04725 PF00037 4Fe-4S binding domain RPIC_RS04730 PF01368 DHH family RPIC_RS04730 PF17768 RecJ OB domain RPIC_RS04730 PF02272 DHHA1 domain RPIC_RS04740 PF12704 MacB-like periplasmic core domain RPIC_RS04740 PF02687 FtsX-like permease family RPIC_RS04745 PF00005 ABC transporter RPIC_RS04750 PF01026 TatD related DNase RPIC_RS04755 PF03772 Competence protein RPIC_RS04755 PF00753 Metallo-beta-lactamase superfamily RPIC_RS04760 PF14403 Circularly permuted ATP-grasp type 2 RPIC_RS04770 PF01841 Transglutaminase-like superfamily RPIC_RS04770 PF08379 Bacterial transglutaminase-like N-terminal region RPIC_RS04780 PF08386 TAP-like protein RPIC_RS04780 PF00561 alpha/beta hydrolase fold RPIC_RS04785 PF00117 Glutamine amidotransferase class-I RPIC_RS04785 PF06418 CTP synthase N-terminus RPIC_RS04790 PF00793 DAHP synthetase I family RPIC_RS04800 PF03952 Enolase, N-terminal domain RPIC_RS04800 PF00113 Enolase, C-terminal TIM barrel domain RPIC_RS04805 PF04977 Septum formation initiator RPIC_RS04815 PF01430 Hsp33 protein RPIC_RS04820 PF00132 Bacterial transferase hexapeptide (six repeats) RPIC_RS04825 PF04305 Protein of unknown function (DUF455) RPIC_RS04830 PF00561 alpha/beta hydrolase fold RPIC_RS04835 PF04134 Protein of unknown function, DUF393 RPIC_RS04845 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC_RS04850 PF02811 PHP domain RPIC_RS04855 PF01300 Telomere recombination RPIC_RS04860 PF02163 Peptidase family M50 RPIC_RS04865 PF00579 tRNA synthetases class I (W and Y) RPIC_RS04875 PF00701 Dihydrodipicolinate synthetase family RPIC_RS04880 PF06804 NlpB/DapX lipoprotein RPIC_RS04895 PF08007 Cupin superfamily protein RPIC_RS04900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RPIC_RS04910 PF05188 MutS domain II RPIC_RS04910 PF00488 MutS domain V RPIC_RS04910 PF05190 MutS family domain IV RPIC_RS04910 PF05192 MutS domain III RPIC_RS04910 PF01624 MutS domain I RPIC_RS04915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS04915 PF03466 LysR substrate binding domain RPIC_RS04920 PF00672 HAMP domain RPIC_RS04920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC_RS04920 PF17200 Single Cache domain 2 RPIC_RS04925 PF02203 Tar ligand binding domain homologue RPIC_RS04925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC_RS04925 PF00672 HAMP domain RPIC_RS04930 PF03475 3-alpha domain RPIC_RS04930 PF03473 MOSC domain RPIC_RS04935 PF00117 Glutamine amidotransferase class-I RPIC_RS04950 PF00459 Inositol monophosphatase family RPIC_RS04955 PF00588 SpoU rRNA Methylase family RPIC_RS04960 PF00132 Bacterial transferase hexapeptide (six repeats) RPIC_RS04965 PF00149 Calcineurin-like phosphoesterase RPIC_RS04970 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RPIC_RS04975 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RPIC_RS04985 PF09190 DALR domain RPIC_RS04985 PF01406 tRNA synthetases class I (C) catalytic domain RPIC_RS04990 PF00730 HhH-GPD superfamily base excision DNA repair protein RPIC_RS04995 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RPIC_RS05000 PF01171 PP-loop family RPIC_RS05000 PF09179 TilS substrate binding domain RPIC_RS05000 PF11734 TilS substrate C-terminal domain RPIC_RS05005 PF13840 ACT domain RPIC_RS05005 PF00696 Amino acid kinase family RPIC_RS05005 PF01842 ACT domain RPIC_RS05020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RPIC_RS05025 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS05030 PF12911 N-terminal TM domain of oligopeptide transport permease C RPIC_RS05030 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS05035 PF00005 ABC transporter RPIC_RS05035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RPIC_RS05040 PF00877 NlpC/P60 family RPIC_RS05050 PF13276 HTH-like domain RPIC_RS05050 PF13333 Integrase core domain RPIC_RS05050 PF00665 Integrase core domain RPIC_RS05055 PF01734 Patatin-like phospholipase RPIC_RS05060 PF00749 tRNA synthetases class I (E and Q), catalytic domain RPIC_RS05080 PF01554 MatE RPIC_RS05090 PF01197 Ribosomal protein L31 RPIC_RS05100 PF06167 Glucose-regulated metallo-peptidase M90 RPIC_RS05105 PF00072 Response regulator receiver domain RPIC_RS05105 PF00196 Bacterial regulatory proteins, luxR family RPIC_RS05115 PF00158 Sigma-54 interaction domain RPIC_RS05115 PF02954 Bacterial regulatory protein, Fis family RPIC_RS05115 PF00072 Response regulator receiver domain RPIC_RS05120 PF07497 Rho termination factor, RNA-binding domain RPIC_RS05120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RPIC_RS05120 PF07498 Rho termination factor, N-terminal domain RPIC_RS05125 PF00085 Thioredoxin RPIC_RS05135 PF13361 UvrD-like helicase C-terminal domain RPIC_RS05135 PF00580 UvrD/REP helicase N-terminal domain RPIC_RS05135 PF12705 PD-(D/E)XK nuclease superfamily RPIC_RS05140 PF12170 DNA polymerase III tau subunit V interacting with alpha RPIC_RS05140 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding RPIC_RS05140 PF12169 DNA polymerase III subunits gamma and tau domain III RPIC_RS05145 PF02575 YbaB/EbfC DNA-binding family RPIC_RS05150 PF03992 Antibiotic biosynthesis monooxygenase RPIC_RS05155 PF02132 RecR protein RPIC_RS05155 PF13662 Toprim domain RPIC_RS05170 PF02515 CoA-transferase family III RPIC_RS05180 PF00005 ABC transporter RPIC_RS05185 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS05190 PF00440 Bacterial regulatory proteins, tetR family RPIC_RS05190 PF16925 Tetracyclin repressor-like, C-terminal domain RPIC_RS05195 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RPIC_RS05200 PF00550 Phosphopantetheine attachment site RPIC_RS05200 PF14765 Polyketide synthase dehydratase RPIC_RS05200 PF02801 Beta-ketoacyl synthase, C-terminal domain RPIC_RS05200 PF08659 KR domain RPIC_RS05200 PF00107 Zinc-binding dehydrogenase RPIC_RS05200 PF00109 Beta-ketoacyl synthase, N-terminal domain RPIC_RS05200 PF08240 Alcohol dehydrogenase GroES-like domain RPIC_RS05200 PF00698 Acyl transferase domain RPIC_RS05200 PF16197 Ketoacyl-synthetase C-terminal extension RPIC_RS05205 PF01975 Survival protein SurE RPIC_RS05215 PF01476 LysM domain RPIC_RS05215 PF01551 Peptidase family M23 RPIC_RS05220 PF00140 Sigma-70 factor, region 1.2 RPIC_RS05220 PF04545 Sigma-70, region 4 RPIC_RS05220 PF04542 Sigma-70 region 2 RPIC_RS05220 PF04539 Sigma-70 region 3 RPIC_RS05230 PF05958 tRNA (Uracil-5-)-methyltransferase RPIC_RS05235 PF01027 Inhibitor of apoptosis-promoting Bax1 RPIC_RS05240 PF00334 Nucleoside diphosphate kinase RPIC_RS05245 PF04055 Radical SAM superfamily RPIC_RS05260 PF04551 GcpE protein RPIC_RS05265 PF13393 Histidyl-tRNA synthetase RPIC_RS05265 PF03129 Anticodon binding domain RPIC_RS05270 PF09976 Tetratricopeptide repeat-like domain RPIC_RS05275 PF13360 PQQ-like domain RPIC_RS05280 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RPIC_RS05280 PF01926 50S ribosome-binding GTPase RPIC_RS05285 PF17209 Hfq protein RPIC_RS05290 PF16360 GTP-binding GTPase Middle Region RPIC_RS05290 PF13167 GTP-binding GTPase N-terminal RPIC_RS05290 PF01926 50S ribosome-binding GTPase RPIC_RS05295 PF01145 SPFH domain / Band 7 family RPIC_RS05295 PF12221 Bacterial membrane protein N terminal RPIC_RS05300 PF01145 SPFH domain / Band 7 family RPIC_RS05310 PF13393 Histidyl-tRNA synthetase RPIC_RS05315 PF00709 Adenylosuccinate synthetase RPIC_RS05320 PF00156 Phosphoribosyl transferase domain RPIC_RS05330 PF17876 Cold shock domain RPIC_RS05330 PF08461 Ribonuclease R winged-helix domain RPIC_RS05330 PF08206 Ribonuclease B OB domain RPIC_RS05330 PF00575 S1 RNA binding domain RPIC_RS05330 PF00773 RNB domain RPIC_RS05335 PF00588 SpoU rRNA Methylase family RPIC_RS05335 PF08032 RNA 2'-O ribose methyltransferase substrate binding RPIC_RS05340 PF02146 Sir2 family RPIC_RS05345 PF00923 Transaldolase/Fructose-6-phosphate aldolase RPIC_RS05350 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RPIC_RS05355 PF04362 Bacterial Fe(2+) trafficking RPIC_RS05360 PF00696 Amino acid kinase family RPIC_RS05360 PF00583 Acetyltransferase (GNAT) family RPIC_RS05365 PF00270 DEAD/DEAH box helicase RPIC_RS05365 PF04408 Helicase associated domain (HA2) RPIC_RS05365 PF00271 Helicase conserved C-terminal domain RPIC_RS05365 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RPIC_RS05365 PF11898 Domain of unknown function (DUF3418) RPIC_RS05390 PF18146 Damage-inducible protein CinA KH domain RPIC_RS05390 PF02464 Competence-damaged protein RPIC_RS05390 PF00994 Probable molybdopterin binding domain RPIC_RS05400 PF00120 Glutamine synthetase, catalytic domain RPIC_RS05400 PF03951 Glutamine synthetase, beta-Grasp domain RPIC_RS05410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS05410 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS05410 PF00989 PAS fold RPIC_RS05415 PF00158 Sigma-54 interaction domain RPIC_RS05415 PF00072 Response regulator receiver domain RPIC_RS05415 PF02954 Bacterial regulatory protein, Fis family RPIC_RS05430 PF13416 Bacterial extracellular solute-binding protein RPIC_RS05435 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS05440 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS05445 PF00005 ABC transporter RPIC_RS05445 PF17912 MalK OB fold domain RPIC_RS05450 PF03009 Glycerophosphoryl diester phosphodiesterase family RPIC_RS05455 PF16078 2-oxoglutarate dehydrogenase N-terminus RPIC_RS05455 PF16870 2-oxoglutarate dehydrogenase C-terminal RPIC_RS05455 PF00676 Dehydrogenase E1 component RPIC_RS05455 PF02779 Transketolase, pyrimidine binding domain RPIC_RS05460 PF02817 e3 binding domain RPIC_RS05460 PF00364 Biotin-requiring enzyme RPIC_RS05460 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RPIC_RS05465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RPIC_RS05465 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC_RS05470 PF03969 AFG1-like ATPase RPIC_RS05480 PF00403 Heavy-metal-associated domain RPIC_RS05490 PF00115 Cytochrome C and Quinol oxidase polypeptide I RPIC_RS05505 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP RPIC_RS05505 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPIC_RS05510 PF12801 4Fe-4S binding domain RPIC_RS05510 PF13746 4Fe-4S dicluster domain RPIC_RS05510 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase RPIC_RS05525 PF00027 Cyclic nucleotide-binding domain RPIC_RS05525 PF13545 Crp-like helix-turn-helix domain RPIC_RS05535 PF04079 Segregation and condensation complex subunit ScpB RPIC_RS05540 PF01479 S4 domain RPIC_RS05540 PF00849 RNA pseudouridylate synthase RPIC_RS05545 PF17384 RimP C-terminal SH3 domain RPIC_RS05545 PF02576 RimP N-terminal domain RPIC_RS05550 PF13184 NusA-like KH domain RPIC_RS05550 PF08529 NusA N-terminal domain RPIC_RS05555 PF08364 Bacterial translation initiation factor IF-2 associated region RPIC_RS05555 PF04760 Translation initiation factor IF-2, N-terminal region RPIC_RS05555 PF00009 Elongation factor Tu GTP binding domain RPIC_RS05555 PF11987 Translation-initiation factor 2 RPIC_RS05560 PF02033 Ribosome-binding factor A RPIC_RS05565 PF16198 tRNA pseudouridylate synthase B C-terminal domain RPIC_RS05565 PF09157 Pseudouridine synthase II TruB, C-terminal RPIC_RS05565 PF01509 TruB family pseudouridylate synthase (N terminal domain) RPIC_RS05575 PF13276 HTH-like domain RPIC_RS05575 PF13333 Integrase core domain RPIC_RS05575 PF00665 Integrase core domain RPIC_RS05580 PF07690 Major Facilitator Superfamily RPIC_RS05585 PF00529 HlyD membrane-fusion protein of T1SS RPIC_RS05585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RPIC_RS05590 PF02321 Outer membrane efflux protein RPIC_RS05595 PF01047 MarR family RPIC_RS05600 PF00009 Elongation factor Tu GTP binding domain RPIC_RS05600 PF00679 Elongation factor G C-terminus RPIC_RS05600 PF03144 Elongation factor Tu domain 2 RPIC_RS05610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS05610 PF03466 LysR substrate binding domain RPIC_RS05615 PF04116 Fatty acid hydroxylase superfamily RPIC_RS05620 PF00378 Enoyl-CoA hydratase/isomerase RPIC_RS05660 PF02798 Glutathione S-transferase, N-terminal domain RPIC_RS05660 PF00043 Glutathione S-transferase, C-terminal domain RPIC_RS05665 PF01527 Transposase RPIC_RS05670 PF13333 Integrase core domain RPIC_RS05670 PF00665 Integrase core domain RPIC_RS05670 PF13276 HTH-like domain RPIC_RS05680 PF00155 Aminotransferase class I and II RPIC_RS05685 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RPIC_RS05690 PF00109 Beta-ketoacyl synthase, N-terminal domain RPIC_RS05690 PF16197 Ketoacyl-synthetase C-terminal extension RPIC_RS05690 PF00698 Acyl transferase domain RPIC_RS05690 PF14765 Polyketide synthase dehydratase RPIC_RS05690 PF08659 KR domain RPIC_RS05690 PF00550 Phosphopantetheine attachment site RPIC_RS05690 PF02801 Beta-ketoacyl synthase, C-terminal domain RPIC_RS05690 PF08240 Alcohol dehydrogenase GroES-like domain RPIC_RS05695 PF00884 Sulfatase RPIC_RS05700 PF00106 short chain dehydrogenase RPIC_RS05705 PF05159 Capsule polysaccharide biosynthesis protein RPIC_RS05715 PF01061 ABC-2 type transporter RPIC_RS05720 PF00005 ABC transporter RPIC_RS05735 PF00534 Glycosyl transferases group 1 RPIC_RS05740 PF16363 GDP-mannose 4,6 dehydratase RPIC_RS05745 PF16363 GDP-mannose 4,6 dehydratase RPIC_RS05760 PF02563 Polysaccharide biosynthesis/export protein RPIC_RS05770 PF05159 Capsule polysaccharide biosynthesis protein RPIC_RS05775 PF00483 Nucleotidyl transferase RPIC_RS05775 PF01050 Mannose-6-phosphate isomerase RPIC_RS05790 PF12680 SnoaL-like domain RPIC_RS05790 PF08281 Sigma-70, region 4 RPIC_RS05790 PF04542 Sigma-70 region 2 RPIC_RS05805 PF13007 Transposase C of IS166 homeodomain RPIC_RS05805 PF13817 IS66 C-terminal element RPIC_RS05805 PF03050 Transposase IS66 family RPIC_RS05805 PF13005 zinc-finger binding domain of transposase IS66 RPIC_RS05810 PF00990 Diguanylate cyclase, GGDEF domain RPIC_RS05815 PF17154 Gammaproteobacterial periplasmic sensor domain RPIC_RS05815 PF00672 HAMP domain RPIC_RS05815 PF00990 Diguanylate cyclase, GGDEF domain RPIC_RS05815 PF00563 EAL domain RPIC_RS05825 PF01207 Dihydrouridine synthase (Dus) RPIC_RS05840 PF01546 Peptidase family M20/M25/M40 RPIC_RS05855 PF00717 Peptidase S24-like RPIC_RS05855 PF01726 LexA DNA binding domain RPIC_RS05860 PF00970 Oxidoreductase FAD-binding domain RPIC_RS05860 PF00175 Oxidoreductase NAD-binding domain RPIC_RS05865 PF17763 Glutaminase/Asparaginase C-terminal domain RPIC_RS05865 PF00710 Asparaginase, N-terminal RPIC_RS05870 PF01250 Ribosomal protein S6 RPIC_RS05880 PF01084 Ribosomal protein S18 RPIC_RS05885 PF01281 Ribosomal protein L9, N-terminal domain RPIC_RS05885 PF03948 Ribosomal protein L9, C-terminal domain RPIC_RS05890 PF03796 DnaB-like helicase C terminal domain RPIC_RS05890 PF00772 DnaB-like helicase N terminal domain RPIC_RS05900 PF01384 Phosphate transporter family RPIC_RS05905 PF00877 NlpC/P60 family RPIC_RS05915 PF13638 PIN domain RPIC_RS05915 PF02562 PhoH-like protein RPIC_RS05920 PF00578 AhpC/TSA family RPIC_RS05925 PF01522 Polysaccharide deacetylase RPIC_RS05930 PF01370 NAD dependent epimerase/dehydratase family RPIC_RS05930 PF02911 Formyl transferase, C-terminal domain RPIC_RS05930 PF00551 Formyl transferase RPIC_RS05935 PF00551 Formyl transferase RPIC_RS05935 PF02911 Formyl transferase, C-terminal domain RPIC_RS05935 PF01370 NAD dependent epimerase/dehydratase family RPIC_RS05940 PF00535 Glycosyl transferase family 2 RPIC_RS05945 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RPIC_RS05950 PF00892 EamA-like transporter family RPIC_RS05955 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase RPIC_RS05965 PF00155 Aminotransferase class I and II RPIC_RS05970 PF00742 Homoserine dehydrogenase RPIC_RS05970 PF01842 ACT domain RPIC_RS05970 PF03447 Homoserine dehydrogenase, NAD binding domain RPIC_RS05975 PF14821 Threonine synthase N terminus RPIC_RS05975 PF00291 Pyridoxal-phosphate dependent enzyme RPIC_RS05980 PF03167 Uracil DNA glycosylase superfamily RPIC_RS05985 PF00994 Probable molybdopterin binding domain RPIC_RS05985 PF03453 MoeA N-terminal region (domain I and II) RPIC_RS05985 PF03454 MoeA C-terminal region (domain IV) RPIC_RS05990 PF02597 ThiS family RPIC_RS05995 PF02391 MoaE protein RPIC_RS06000 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RPIC_RS06005 PF10605 3HB-oligomer hydrolase (3HBOH) RPIC_RS06010 PF00004 ATPase family associated with various cellular activities (AAA) RPIC_RS06010 PF02861 Clp amino terminal domain, pathogenicity island component RPIC_RS06010 PF17871 AAA lid domain RPIC_RS06010 PF07724 AAA domain (Cdc48 subfamily) RPIC_RS06010 PF10431 C-terminal, D2-small domain, of ClpB protein RPIC_RS06020 PF03358 NADPH-dependent FMN reductase RPIC_RS06025 PF09084 NMT1/THI5 like RPIC_RS06030 PF09084 NMT1/THI5 like RPIC_RS06035 PF00296 Luciferase-like monooxygenase RPIC_RS06040 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS06045 PF00005 ABC transporter RPIC_RS06065 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS06070 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS06075 PF17850 CysA C-terminal regulatory domain RPIC_RS06075 PF00005 ABC transporter RPIC_RS06075 PF12857 TOBE-like domain RPIC_RS06080 PF03466 LysR substrate binding domain RPIC_RS06080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS06090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS06090 PF06580 Histidine kinase RPIC_RS06090 PF02743 Cache domain RPIC_RS06090 PF00672 HAMP domain RPIC_RS06095 PF00072 Response regulator receiver domain RPIC_RS06095 PF04397 LytTr DNA-binding domain RPIC_RS06100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPIC_RS06100 PF00205 Thiamine pyrophosphate enzyme, central domain RPIC_RS06100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPIC_RS06105 PF03737 Aldolase/RraA RPIC_RS06120 PF00463 Isocitrate lyase family RPIC_RS06130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS06130 PF03466 LysR substrate binding domain RPIC_RS06140 PF01274 Malate synthase RPIC_RS06150 PF07690 Major Facilitator Superfamily RPIC_RS06160 PF00814 Glycoprotease family RPIC_RS06165 PF00583 Acetyltransferase (GNAT) family RPIC_RS06170 PF03167 Uracil DNA glycosylase superfamily RPIC_RS06175 PF07690 Major Facilitator Superfamily RPIC_RS06180 PF00842 Alanine racemase, C-terminal domain RPIC_RS06180 PF01168 Alanine racemase, N-terminal domain RPIC_RS06185 PF18073 Rubredoxin metal binding domain RPIC_RS06190 PF02600 Disulfide bond formation protein DsbB RPIC_RS06200 PF02515 CoA-transferase family III RPIC_RS06205 PF00005 ABC transporter RPIC_RS06205 PF12848 ABC transporter RPIC_RS06215 PF01112 Asparaginase RPIC_RS06220 PF00005 ABC transporter RPIC_RS06220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RPIC_RS06225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RPIC_RS06230 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS06235 PF12911 N-terminal TM domain of oligopeptide transport permease C RPIC_RS06235 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS06240 PF03576 Peptidase family S58 RPIC_RS06265 PF05175 Methyltransferase small domain RPIC_RS06275 PF07687 Peptidase dimerisation domain RPIC_RS06275 PF01546 Peptidase family M20/M25/M40 RPIC_RS06280 PF03960 ArsC family RPIC_RS06290 PF00132 Bacterial transferase hexapeptide (six repeats) RPIC_RS06290 PF14602 Hexapeptide repeat of succinyl-transferase RPIC_RS06290 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RPIC_RS06295 PF00155 Aminotransferase class I and II RPIC_RS06305 PF00561 alpha/beta hydrolase fold RPIC_RS06310 PF06470 SMC proteins Flexible Hinge Domain RPIC_RS06310 PF02463 RecF/RecN/SMC N terminal domain RPIC_RS06320 PF12826 Helix-hairpin-helix motif RPIC_RS06320 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RPIC_RS06320 PF03120 NAD-dependent DNA ligase OB-fold domain RPIC_RS06320 PF01653 NAD-dependent DNA ligase adenylation domain RPIC_RS06320 PF00533 BRCA1 C Terminus (BRCT) domain RPIC_RS06325 PF01327 Polypeptide deformylase RPIC_RS06335 PF01479 S4 domain RPIC_RS06335 PF00849 RNA pseudouridylate synthase RPIC_RS06340 PF01909 Nucleotidyltransferase domain RPIC_RS06340 PF08335 GlnD PII-uridylyltransferase RPIC_RS06340 PF01966 HD domain RPIC_RS06345 PF00557 Metallopeptidase family M24 RPIC_RS06350 PF00318 Ribosomal protein S2 RPIC_RS06355 PF00889 Elongation factor TS RPIC_RS06360 PF00696 Amino acid kinase family RPIC_RS06365 PF01765 Ribosome recycling factor RPIC_RS06370 PF01255 Putative undecaprenyl diphosphate synthase RPIC_RS06380 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RPIC_RS06380 PF13288 DXP reductoisomerase C-terminal domain RPIC_RS06380 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RPIC_RS06385 PF02163 Peptidase family M50 RPIC_RS06385 PF17820 PDZ domain RPIC_RS06390 PF07244 Surface antigen variable number repeat RPIC_RS06390 PF01103 Surface antigen RPIC_RS06395 PF03938 Outer membrane protein (OmpH-like) RPIC_RS06400 PF00132 Bacterial transferase hexapeptide (six repeats) RPIC_RS06400 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RPIC_RS06405 PF07977 FabA-like domain RPIC_RS06410 PF00132 Bacterial transferase hexapeptide (six repeats) RPIC_RS06410 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RPIC_RS06415 PF02684 Lipid-A-disaccharide synthetase RPIC_RS06420 PF01351 Ribonuclease HII RPIC_RS06425 PF00588 SpoU rRNA Methylase family RPIC_RS06425 PF08032 RNA 2'-O ribose methyltransferase substrate binding RPIC_RS06435 PF00561 alpha/beta hydrolase fold RPIC_RS06435 PF00106 short chain dehydrogenase RPIC_RS06445 PF03618 Kinase/pyrophosphorylase RPIC_RS06450 PF00391 PEP-utilising enzyme, mobile domain RPIC_RS06450 PF02896 PEP-utilising enzyme, TIM barrel domain RPIC_RS06450 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RPIC_RS06460 PF16200 C-terminal region of band_7 RPIC_RS06460 PF01145 SPFH domain / Band 7 family RPIC_RS06465 PF01668 SmpB protein RPIC_RS06470 PF03364 Polyketide cyclase / dehydrase and lipid transport RPIC_RS06475 PF03658 RnfH family Ubiquitin RPIC_RS06485 PF00892 EamA-like transporter family RPIC_RS06490 PF00478 IMP dehydrogenase / GMP reductase domain RPIC_RS06490 PF00571 CBS domain RPIC_RS06500 PF00958 GMP synthase C terminal domain RPIC_RS06500 PF00117 Glutamine amidotransferase class-I RPIC_RS06500 PF02540 NAD synthase RPIC_RS06505 PF00313 'Cold-shock' DNA-binding domain RPIC_RS06535 PF00375 Sodium:dicarboxylate symporter family RPIC_RS06540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS06540 PF03466 LysR substrate binding domain RPIC_RS06545 PF00775 Dioxygenase RPIC_RS06545 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal RPIC_RS06550 PF00775 Dioxygenase RPIC_RS06570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS06570 PF03466 LysR substrate binding domain RPIC_RS06585 PF01323 DSBA-like thioredoxin domain RPIC_RS06590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS06590 PF03466 LysR substrate binding domain RPIC_RS06595 PF07690 Major Facilitator Superfamily RPIC_RS06605 PF01242 6-pyruvoyl tetrahydropterin synthase RPIC_RS06610 PF14437 MafB19-like deaminase RPIC_RS06615 PF17676 LD-carboxypeptidase C-terminal domain RPIC_RS06615 PF02016 LD-carboxypeptidase N-terminal domain RPIC_RS06620 PF00005 ABC transporter RPIC_RS06620 PF12848 ABC transporter RPIC_RS06630 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RPIC_RS06630 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RPIC_RS06635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS06635 PF03466 LysR substrate binding domain RPIC_RS06645 PF00171 Aldehyde dehydrogenase family RPIC_RS06655 PF00723 Glycosyl hydrolases family 15 RPIC_RS06665 PF00793 DAHP synthetase I family RPIC_RS06685 PF02308 MgtC family RPIC_RS06695 PF02625 XdhC and CoxI family RPIC_RS06695 PF13478 XdhC Rossmann domain RPIC_RS06720 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RPIC_RS06720 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPIC_RS06725 PF00111 2Fe-2S iron-sulfur cluster binding domain RPIC_RS06725 PF01799 [2Fe-2S] binding domain RPIC_RS06730 PF05981 CreA protein RPIC_RS06735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS06735 PF03466 LysR substrate binding domain RPIC_RS06740 PF07690 Major Facilitator Superfamily RPIC_RS06750 PF03466 LysR substrate binding domain RPIC_RS06750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS06755 PF13378 Enolase C-terminal domain-like RPIC_RS06755 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RPIC_RS06760 PF02426 Muconolactone delta-isomerase RPIC_RS06765 PF00775 Dioxygenase RPIC_RS06765 PF04444 Catechol dioxygenase N terminus RPIC_RS06770 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RPIC_RS06770 PF00355 Rieske [2Fe-2S] domain RPIC_RS06775 PF00866 Ring hydroxylating beta subunit RPIC_RS06780 PF00970 Oxidoreductase FAD-binding domain RPIC_RS06780 PF00175 Oxidoreductase NAD-binding domain RPIC_RS06780 PF00111 2Fe-2S iron-sulfur cluster binding domain RPIC_RS06785 PF00106 short chain dehydrogenase RPIC_RS06790 PF07690 Major Facilitator Superfamily RPIC_RS06795 PF03594 Benzoate membrane transport protein RPIC_RS06800 PF00202 Aminotransferase class-III RPIC_RS06805 PF00155 Aminotransferase class I and II RPIC_RS06835 PF00682 HMGL-like RPIC_RS06840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS06840 PF03466 LysR substrate binding domain RPIC_RS06845 PF02515 CoA-transferase family III RPIC_RS06850 PF00330 Aconitase family (aconitate hydratase) RPIC_RS06855 PF00694 Aconitase C-terminal domain RPIC_RS06860 PF07690 Major Facilitator Superfamily RPIC_RS06960 PF07690 Major Facilitator Superfamily RPIC_RS06970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS06970 PF03466 LysR substrate binding domain RPIC_RS06975 PF07690 Major Facilitator Superfamily RPIC_RS06980 PF01546 Peptidase family M20/M25/M40 RPIC_RS06980 PF07687 Peptidase dimerisation domain RPIC_RS06985 PF01425 Amidase RPIC_RS07000 PF00149 Calcineurin-like phosphoesterase RPIC_RS07005 PF08402 TOBE domain RPIC_RS07005 PF00005 ABC transporter RPIC_RS07010 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS07015 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS07020 PF01547 Bacterial extracellular solute-binding protein RPIC_RS07025 PF00356 Bacterial regulatory proteins, lacI family RPIC_RS07030 PF03781 Sulfatase-modifying factor enzyme 1 RPIC_RS07030 PF12867 DinB superfamily RPIC_RS07040 PF01026 TatD related DNase RPIC_RS07050 PF09115 DNA polymerase III, delta subunit, C terminal RPIC_RS07055 PF02223 Thymidylate kinase RPIC_RS07060 PF02618 YceG-like family RPIC_RS07065 PF01571 Aminomethyltransferase folate-binding domain RPIC_RS07085 PF03466 LysR substrate binding domain RPIC_RS07085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS07100 PF07859 alpha/beta hydrolase fold RPIC_RS07105 PF00465 Iron-containing alcohol dehydrogenase RPIC_RS07110 PF00561 alpha/beta hydrolase fold RPIC_RS07115 PF00106 short chain dehydrogenase RPIC_RS07125 PF00596 Class II Aldolase and Adducin N-terminal domain RPIC_RS07130 PF00107 Zinc-binding dehydrogenase RPIC_RS07130 PF16884 N-terminal domain of oxidoreductase RPIC_RS07135 PF00144 Beta-lactamase RPIC_RS07150 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC_RS07150 PF12806 Acetyl-CoA dehydrogenase C-terminal like RPIC_RS07150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC_RS07150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC_RS07155 PF02803 Thiolase, C-terminal domain RPIC_RS07155 PF00108 Thiolase, N-terminal domain RPIC_RS07160 PF00857 Isochorismatase family RPIC_RS07165 PF00378 Enoyl-CoA hydratase/isomerase RPIC_RS07165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RPIC_RS07165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RPIC_RS07170 PF00324 Amino acid permease RPIC_RS07175 PF00324 Amino acid permease RPIC_RS07180 PF00005 ABC transporter RPIC_RS07185 PF00005 ABC transporter RPIC_RS07185 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPIC_RS07195 PF02653 Branched-chain amino acid transport system / permease component RPIC_RS07200 PF13458 Periplasmic binding protein RPIC_RS07205 PF13193 AMP-binding enzyme C-terminal domain RPIC_RS07205 PF00501 AMP-binding enzyme RPIC_RS07210 PF02696 Uncharacterized ACR, YdiU/UPF0061 family RPIC_RS07215 PF01641 SelR domain RPIC_RS07220 PF04279 Intracellular septation protein A RPIC_RS07245 PF00005 ABC transporter RPIC_RS07265 PF08402 TOBE domain RPIC_RS07265 PF00005 ABC transporter RPIC_RS07275 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS07280 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS07295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS07295 PF03466 LysR substrate binding domain RPIC_RS07300 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC_RS07310 PF02796 Helix-turn-helix domain of resolvase RPIC_RS07310 PF00239 Resolvase, N terminal domain RPIC_RS07325 PF06778 Chlorite dismutase RPIC_RS07345 PF13817 IS66 C-terminal element RPIC_RS07345 PF03050 Transposase IS66 family RPIC_RS07345 PF13007 Transposase C of IS166 homeodomain RPIC_RS07345 PF13005 zinc-finger binding domain of transposase IS66 RPIC_RS07380 PF03466 LysR substrate binding domain RPIC_RS07380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS07405 PF11740 Plasmid replication region DNA-binding N-term RPIC_RS07455 PF02899 Phage integrase, N-terminal SAM-like domain RPIC_RS07455 PF00589 Phage integrase family RPIC_RS07460 PF13614 AAA domain RPIC_RS07465 PF17762 HTH domain found in ParB protein RPIC_RS07465 PF02195 ParB-like nuclease domain RPIC_RS07475 PF00580 UvrD/REP helicase N-terminal domain RPIC_RS07475 PF13361 UvrD-like helicase C-terminal domain RPIC_RS07485 PF05247 Flagellar transcriptional activator (FlhD) RPIC_RS07545 PF00437 Type II/IV secretion system protein RPIC_RS07555 PF03524 Conjugal transfer protein RPIC_RS07560 PF03743 Bacterial conjugation TrbI-like protein RPIC_RS07600 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RPIC_RS07600 PF00437 Type II/IV secretion system protein RPIC_RS07665 PF00436 Single-strand binding protein family RPIC_RS07745 PF13361 UvrD-like helicase C-terminal domain RPIC_RS07745 PF00580 UvrD/REP helicase N-terminal domain RPIC_RS07760 PF02190 ATP-dependent protease La (LON) substrate-binding domain RPIC_RS07760 PF00004 ATPase family associated with various cellular activities (AAA) RPIC_RS07760 PF05362 Lon protease (S16) C-terminal proteolytic domain RPIC_RS07820 PF02583 Metal-sensitive transcriptional repressor RPIC_RS07825 PF01545 Cation efflux family RPIC_RS07835 PF01545 Cation efflux family RPIC_RS07835 PF16916 Dimerisation domain of Zinc Transporter RPIC_RS07875 PF17762 HTH domain found in ParB protein RPIC_RS07875 PF02195 ParB-like nuclease domain RPIC_RS08055 PF01526 Tn3 transposase DDE domain RPIC_RS08055 PF13700 Domain of unknown function (DUF4158) RPIC_RS08065 PF03239 Iron permease FTR1 family RPIC_RS08070 PF13411 MerR HTH family regulatory protein RPIC_RS08075 PF00403 Heavy-metal-associated domain RPIC_RS08090 PF00873 AcrB/AcrD/AcrF family RPIC_RS08095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RPIC_RS08095 PF00529 HlyD membrane-fusion protein of T1SS RPIC_RS08125 PF00403 Heavy-metal-associated domain RPIC_RS08150 PF11339 Protein of unknown function (DUF3141) RPIC_RS08170 PF00005 ABC transporter RPIC_RS08175 PF02687 FtsX-like permease family RPIC_RS08175 PF12704 MacB-like periplasmic core domain RPIC_RS08210 PF02321 Outer membrane efflux protein RPIC_RS08215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RPIC_RS08220 PF00873 AcrB/AcrD/AcrF family RPIC_RS08225 PF00072 Response regulator receiver domain RPIC_RS08225 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS08230 PF11808 Phosphate regulon sensor protein PhoR RPIC_RS08230 PF00989 PAS fold RPIC_RS08230 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS08230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS08235 PF16916 Dimerisation domain of Zinc Transporter RPIC_RS08235 PF01545 Cation efflux family RPIC_RS08245 PF01545 Cation efflux family RPIC_RS08250 PF02583 Metal-sensitive transcriptional repressor RPIC_RS08305 PF00004 ATPase family associated with various cellular activities (AAA) RPIC_RS08305 PF05362 Lon protease (S16) C-terminal proteolytic domain RPIC_RS08305 PF02190 ATP-dependent protease La (LON) substrate-binding domain RPIC_RS08310 PF02687 FtsX-like permease family RPIC_RS08310 PF12704 MacB-like periplasmic core domain RPIC_RS08320 PF03109 ABC1 family RPIC_RS08325 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) RPIC_RS08330 PF04011 LemA family RPIC_RS08335 PF04536 TPM domain RPIC_RS08355 PF03976 Polyphosphate kinase 2 (PPK2) RPIC_RS08365 PF00004 ATPase family associated with various cellular activities (AAA) RPIC_RS08365 PF17862 AAA+ lid domain RPIC_RS08365 PF01434 Peptidase family M41 RPIC_RS08370 PF06100 MCRA family RPIC_RS08390 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RPIC_RS08390 PF00753 Metallo-beta-lactamase superfamily RPIC_RS08390 PF10996 Beta-Casp domain RPIC_RS08395 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RPIC_RS08395 PF02885 Glycosyl transferase family, helical bundle domain RPIC_RS08395 PF00591 Glycosyl transferase family, a/b domain RPIC_RS08400 PF14572 Phosphoribosyl synthetase-associated domain RPIC_RS08400 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RPIC_RS08415 PF00403 Heavy-metal-associated domain RPIC_RS08425 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS08425 PF00672 HAMP domain RPIC_RS08425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS08430 PF00072 Response regulator receiver domain RPIC_RS08430 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS08435 PF00394 Multicopper oxidase RPIC_RS08435 PF07732 Multicopper oxidase RPIC_RS08435 PF07731 Multicopper oxidase RPIC_RS08440 PF05275 Copper resistance protein B precursor (CopB) RPIC_RS08445 PF04234 CopC domain RPIC_RS08450 PF05425 Copper resistance protein D RPIC_RS08485 PF02899 Phage integrase, N-terminal SAM-like domain RPIC_RS08485 PF00589 Phage integrase family RPIC_RS08495 PF13700 Domain of unknown function (DUF4158) RPIC_RS08495 PF01526 Tn3 transposase DDE domain RPIC_RS08505 PF18644 Phage integrase SAM-like domain RPIC_RS08505 PF00589 Phage integrase family RPIC_RS08520 PF01402 Ribbon-helix-helix protein, copG family RPIC_RS08545 PF00672 HAMP domain RPIC_RS08545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS08545 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS08550 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS08550 PF00072 Response regulator receiver domain RPIC_RS08555 PF01266 FAD dependent oxidoreductase RPIC_RS08580 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase RPIC_RS08590 PF00535 Glycosyl transferase family 2 RPIC_RS08600 PF00403 Heavy-metal-associated domain RPIC_RS08610 PF00460 Flagella basal body rod protein RPIC_RS08615 PF13609 Gram-negative porin RPIC_RS08630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS08630 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS08630 PF00672 HAMP domain RPIC_RS08635 PF00072 Response regulator receiver domain RPIC_RS08635 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS08640 PF01545 Cation efflux family RPIC_RS08645 PF00873 AcrB/AcrD/AcrF family RPIC_RS08650 PF00529 HlyD membrane-fusion protein of T1SS RPIC_RS08650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RPIC_RS08655 PF02321 Outer membrane efflux protein RPIC_RS08670 PF04191 Phospholipid methyltransferase RPIC_RS08675 PF02308 MgtC family RPIC_RS08710 PF05425 Copper resistance protein D RPIC_RS08715 PF04234 CopC domain RPIC_RS08720 PF05275 Copper resistance protein B precursor (CopB) RPIC_RS08725 PF07732 Multicopper oxidase RPIC_RS08725 PF07731 Multicopper oxidase RPIC_RS08725 PF00394 Multicopper oxidase RPIC_RS08730 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS08730 PF00072 Response regulator receiver domain RPIC_RS08735 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS08735 PF00672 HAMP domain RPIC_RS08735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS08745 PF09278 MerR, DNA binding RPIC_RS08745 PF00376 MerR family regulatory protein RPIC_RS08750 PF02411 MerT mercuric transport protein RPIC_RS08755 PF00403 Heavy-metal-associated domain RPIC_RS08760 PF03203 MerC mercury resistance protein RPIC_RS08765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RPIC_RS08765 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC_RS08765 PF00403 Heavy-metal-associated domain RPIC_RS08770 PF13411 MerR HTH family regulatory protein RPIC_RS08785 PF00034 Cytochrome c RPIC_RS08790 PF11412 Disulphide bond corrector protein DsbC RPIC_RS08790 PF02683 Cytochrome C biogenesis protein transmembrane region RPIC_RS08800 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal RPIC_RS08800 PF00355 Rieske [2Fe-2S] domain RPIC_RS08850 PF04945 YHS domain RPIC_RS08855 PF09278 MerR, DNA binding RPIC_RS08855 PF00376 MerR family regulatory protein RPIC_RS08870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RPIC_RS08870 PF00529 HlyD membrane-fusion protein of T1SS RPIC_RS08875 PF00873 AcrB/AcrD/AcrF family RPIC_RS08895 PF01252 Signal peptidase (SPase) II RPIC_RS08900 PF00403 Heavy-metal-associated domain RPIC_RS08905 PF13411 MerR HTH family regulatory protein RPIC_RS08910 PF03239 Iron permease FTR1 family RPIC_RS08915 PF00696 Amino acid kinase family RPIC_RS08915 PF00583 Acetyltransferase (GNAT) family RPIC_RS08920 PF00230 Major intrinsic protein RPIC_RS08925 PF01451 Low molecular weight phosphotyrosine protein phosphatase RPIC_RS08935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPIC_RS08945 PF02899 Phage integrase, N-terminal SAM-like domain RPIC_RS08945 PF00589 Phage integrase family RPIC_RS08950 PF13276 HTH-like domain RPIC_RS08950 PF00665 Integrase core domain RPIC_RS08950 PF13333 Integrase core domain RPIC_RS08955 PF01527 Transposase RPIC_RS09005 PF05425 Copper resistance protein D RPIC_RS09010 PF04234 CopC domain RPIC_RS09015 PF05275 Copper resistance protein B precursor (CopB) RPIC_RS09020 PF00394 Multicopper oxidase RPIC_RS09020 PF07731 Multicopper oxidase RPIC_RS09020 PF07732 Multicopper oxidase RPIC_RS09025 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS09025 PF00072 Response regulator receiver domain RPIC_RS09030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS09030 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS09030 PF00672 HAMP domain RPIC_RS09065 PF04945 YHS domain RPIC_RS09070 PF00394 Multicopper oxidase RPIC_RS09070 PF07732 Multicopper oxidase RPIC_RS09070 PF07731 Multicopper oxidase RPIC_RS09080 PF00239 Resolvase, N terminal domain RPIC_RS09080 PF02796 Helix-turn-helix domain of resolvase RPIC_RS09095 PF06778 Chlorite dismutase RPIC_RS09105 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RPIC_RS09105 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal RPIC_RS09105 PF02769 AIR synthase related protein, C-terminal domain RPIC_RS09115 PF01256 Carbohydrate kinase RPIC_RS09115 PF03853 YjeF-related protein N-terminus RPIC_RS09120 PF00342 Phosphoglucose isomerase RPIC_RS09125 PF00005 ABC transporter RPIC_RS09130 PF13472 GDSL-like Lipase/Acylhydrolase family RPIC_RS09135 PF10502 Signal peptidase, peptidase S26 RPIC_RS09140 PF05698 Bacterial trigger factor protein (TF) C-terminus RPIC_RS09155 PF00216 Bacterial DNA-binding protein RPIC_RS09160 PF00004 ATPase family associated with various cellular activities (AAA) RPIC_RS09160 PF02190 ATP-dependent protease La (LON) substrate-binding domain RPIC_RS09160 PF05362 Lon protease (S16) C-terminal proteolytic domain RPIC_RS09165 PF06689 ClpX C4-type zinc finger RPIC_RS09165 PF07724 AAA domain (Cdc48 subfamily) RPIC_RS09165 PF10431 C-terminal, D2-small domain, of ClpB protein RPIC_RS09170 PF00574 Clp protease RPIC_RS09175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RPIC_RS09175 PF05698 Bacterial trigger factor protein (TF) C-terminus RPIC_RS09175 PF05697 Bacterial trigger factor protein (TF) RPIC_RS09180 PF01266 FAD dependent oxidoreductase RPIC_RS09180 PF05430 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS09195 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RPIC_RS09200 PF00510 Cytochrome c oxidase subunit III RPIC_RS09205 PF00115 Cytochrome C and Quinol oxidase polypeptide I RPIC_RS09210 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RPIC_RS09210 PF06481 COX Aromatic Rich Motif RPIC_RS09215 PF07690 Major Facilitator Superfamily RPIC_RS09215 PF00083 Sugar (and other) transporter RPIC_RS09230 PF17645 Arylmalonate decarboxylase RPIC_RS09235 PF07690 Major Facilitator Superfamily RPIC_RS09240 PF03466 LysR substrate binding domain RPIC_RS09240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS09270 PF03150 Di-haem cytochrome c peroxidase RPIC_RS09280 PF00873 AcrB/AcrD/AcrF family RPIC_RS09285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RPIC_RS09310 PF00072 Response regulator receiver domain RPIC_RS09310 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS09315 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS09315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS09315 PF00672 HAMP domain RPIC_RS09320 PF00578 AhpC/TSA family RPIC_RS09325 PF02627 Carboxymuconolactone decarboxylase family RPIC_RS09330 PF02542 YgbB family RPIC_RS09335 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RPIC_RS09340 PF17757 UvrB interaction domain RPIC_RS09340 PF03461 TRCF domain RPIC_RS09340 PF00270 DEAD/DEAH box helicase RPIC_RS09340 PF02559 CarD-like/TRCF domain RPIC_RS09340 PF00271 Helicase conserved C-terminal domain RPIC_RS09345 PF07687 Peptidase dimerisation domain RPIC_RS09345 PF01546 Peptidase family M20/M25/M40 RPIC_RS09355 PF06250 YhcG PDDEXK nuclease domain RPIC_RS09355 PF17761 DUF1016 N-terminal domain RPIC_RS09360 PF01053 Cys/Met metabolism PLP-dependent enzyme RPIC_RS09370 PF00108 Thiolase, N-terminal domain RPIC_RS09370 PF02803 Thiolase, C-terminal domain RPIC_RS09375 PF04055 Radical SAM superfamily RPIC_RS09375 PF18693 TRAM domain RPIC_RS09375 PF00919 Uncharacterized protein family UPF0004 RPIC_RS09380 PF01207 Dihydrouridine synthase (Dus) RPIC_RS09385 PF07879 PHB/PHA accumulation regulator DNA-binding domain RPIC_RS09385 PF05233 PHB accumulation regulatory domain RPIC_RS09390 PF00106 short chain dehydrogenase RPIC_RS09395 PF02803 Thiolase, C-terminal domain RPIC_RS09395 PF00108 Thiolase, N-terminal domain RPIC_RS09400 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus RPIC_RS09410 PF02578 Multi-copper polyphenol oxidoreductase laccase RPIC_RS09415 PF00849 RNA pseudouridylate synthase RPIC_RS09415 PF01479 S4 domain RPIC_RS09420 PF13525 Outer membrane lipoprotein RPIC_RS09425 PF04851 Type III restriction enzyme, res subunit RPIC_RS09425 PF13307 Helicase C-terminal domain RPIC_RS09440 PF09371 Tex-like protein N-terminal domain RPIC_RS09440 PF17674 HHH domain RPIC_RS09440 PF00575 S1 RNA binding domain RPIC_RS09440 PF16921 Tex protein YqgF-like domain RPIC_RS09450 PF02705 K+ potassium transporter RPIC_RS09460 PF01180 Dihydroorotate dehydrogenase RPIC_RS09475 PF03099 Biotin/lipoate A/B protein ligase family RPIC_RS09475 PF00293 NUDIX domain RPIC_RS09480 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RPIC_RS09485 PF04376 Arginine-tRNA-protein transferase, N terminus RPIC_RS09485 PF04377 Arginine-tRNA-protein transferase, C terminus RPIC_RS09500 PF11870 Domain of unknown function (DUF3390) RPIC_RS09500 PF02589 LUD domain RPIC_RS09500 PF13183 4Fe-4S dicluster domain RPIC_RS09505 PF02754 Cysteine-rich domain RPIC_RS09510 PF01614 Bacterial transcriptional regulator RPIC_RS09510 PF09339 IclR helix-turn-helix domain RPIC_RS09515 PF00768 D-alanyl-D-alanine carboxypeptidase RPIC_RS09520 PF00881 Nitroreductase family RPIC_RS09525 PF03061 Thioesterase superfamily RPIC_RS09535 PF00850 Histone deacetylase domain RPIC_RS09540 PF09361 Phasin protein RPIC_RS09550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RPIC_RS09550 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC_RS09560 PF02817 e3 binding domain RPIC_RS09560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RPIC_RS09560 PF00364 Biotin-requiring enzyme RPIC_RS09565 PF17831 Pyruvate dehydrogenase E1 component middle domain RPIC_RS09565 PF00456 Transketolase, thiamine diphosphate binding domain RPIC_RS09570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS09570 PF00989 PAS fold RPIC_RS09570 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS09575 PF00072 Response regulator receiver domain RPIC_RS09575 PF00196 Bacterial regulatory proteins, luxR family RPIC_RS09580 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RPIC_RS09580 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RPIC_RS09585 PF01432 Peptidase family M3 RPIC_RS09595 PF01047 MarR family RPIC_RS09600 PF03328 HpcH/HpaI aldolase/citrate lyase family RPIC_RS09605 PF01557 Fumarylacetoacetate (FAA) hydrolase family RPIC_RS09615 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RPIC_RS09620 PF00171 Aldehyde dehydrogenase family RPIC_RS09625 PF01557 Fumarylacetoacetate (FAA) hydrolase family RPIC_RS09630 PF01557 Fumarylacetoacetate (FAA) hydrolase family RPIC_RS09640 PF13520 Amino acid permease RPIC_RS09645 PF11799 impB/mucB/samB family C-terminal domain RPIC_RS09645 PF00817 impB/mucB/samB family RPIC_RS09660 PF02627 Carboxymuconolactone decarboxylase family RPIC_RS09665 PF12852 Cupin RPIC_RS09665 PF12833 Helix-turn-helix domain RPIC_RS09690 PF00216 Bacterial DNA-binding protein RPIC_RS09695 PF03147 Ferredoxin-fold anticodon binding domain RPIC_RS09695 PF03483 B3/4 domain RPIC_RS09695 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RPIC_RS09695 PF01588 Putative tRNA binding domain RPIC_RS09695 PF03484 tRNA synthetase B5 domain RPIC_RS09700 PF01409 tRNA synthetases class II core domain (F) RPIC_RS09700 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RPIC_RS09705 PF00453 Ribosomal protein L20 RPIC_RS09710 PF01632 Ribosomal protein L35 RPIC_RS09715 PF00707 Translation initiation factor IF-3, C-terminal domain RPIC_RS09715 PF05198 Translation initiation factor IF-3, N-terminal domain RPIC_RS09720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RPIC_RS09720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RPIC_RS09720 PF02824 TGS domain RPIC_RS09720 PF03129 Anticodon binding domain RPIC_RS09730 PF04607 Region found in RelA / SpoT proteins RPIC_RS09730 PF02824 TGS domain RPIC_RS09730 PF13291 ACT domain RPIC_RS09735 PF01042 Endoribonuclease L-PSP RPIC_RS09745 PF00106 short chain dehydrogenase RPIC_RS09750 PF01144 Coenzyme A transferase RPIC_RS09755 PF01144 Coenzyme A transferase RPIC_RS09760 PF00196 Bacterial regulatory proteins, luxR family RPIC_RS09760 PF00072 Response regulator receiver domain RPIC_RS09775 PF01264 Chorismate synthase RPIC_RS09780 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RPIC_RS09780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RPIC_RS09785 PF07690 Major Facilitator Superfamily RPIC_RS09790 PF00571 CBS domain RPIC_RS09790 PF00478 IMP dehydrogenase / GMP reductase domain RPIC_RS09795 PF01053 Cys/Met metabolism PLP-dependent enzyme RPIC_RS09800 PF00561 alpha/beta hydrolase fold RPIC_RS09800 PF00364 Biotin-requiring enzyme RPIC_RS09810 PF03631 Virulence factor BrkB RPIC_RS09815 PF03358 NADPH-dependent FMN reductase RPIC_RS09825 PF01565 FAD binding domain RPIC_RS09825 PF02913 FAD linked oxidases, C-terminal domain RPIC_RS09840 PF00691 OmpA family RPIC_RS09845 PF01037 Lrp/AsnC ligand binding domain RPIC_RS09845 PF13404 AsnC-type helix-turn-helix domain RPIC_RS09850 PF00266 Aminotransferase class-V RPIC_RS09855 PF01037 Lrp/AsnC ligand binding domain RPIC_RS09860 PF00291 Pyridoxal-phosphate dependent enzyme RPIC_RS09875 PF00248 Aldo/keto reductase family RPIC_RS09880 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC_RS09880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RPIC_RS09895 PF01810 LysE type translocator RPIC_RS09900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS09900 PF03466 LysR substrate binding domain RPIC_RS09905 PF00753 Metallo-beta-lactamase superfamily RPIC_RS09915 PF01925 Sulfite exporter TauE/SafE RPIC_RS09935 PF02541 Ppx/GppA phosphatase family RPIC_RS09940 PF17941 Polyphosphate kinase C-terminal domain 1 RPIC_RS09940 PF02503 Polyphosphate kinase middle domain RPIC_RS09940 PF13090 Polyphosphate kinase C-terminal domain 2 RPIC_RS09940 PF13089 Polyphosphate kinase N-terminal domain RPIC_RS09945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS09945 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS09945 PF11808 Phosphate regulon sensor protein PhoR RPIC_RS09945 PF00989 PAS fold RPIC_RS09950 PF00072 Response regulator receiver domain RPIC_RS09950 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS09955 PF01895 PhoU domain RPIC_RS09960 PF00005 ABC transporter RPIC_RS09965 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS09970 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS09975 PF12849 PBP superfamily domain RPIC_RS09980 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RPIC_RS09980 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RPIC_RS09980 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RPIC_RS09980 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RPIC_RS09985 PF00809 Pterin binding enzyme RPIC_RS09990 PF00004 ATPase family associated with various cellular activities (AAA) RPIC_RS09990 PF17862 AAA+ lid domain RPIC_RS09990 PF06480 FtsH Extracellular RPIC_RS09990 PF01434 Peptidase family M41 RPIC_RS09995 PF01728 FtsJ-like methyltransferase RPIC_RS10000 PF01985 CRS1 / YhbY (CRM) domain RPIC_RS10010 PF01272 Transcription elongation factor, GreA/GreB, C-term RPIC_RS10010 PF03449 Transcription elongation factor, N-terminal RPIC_RS10015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPIC_RS10015 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RPIC_RS10015 PF02142 MGS-like domain RPIC_RS10020 PF01810 LysE type translocator RPIC_RS10025 PF00117 Glutamine amidotransferase class-I RPIC_RS10025 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RPIC_RS10030 PF00501 AMP-binding enzyme RPIC_RS10030 PF16177 Acetyl-coenzyme A synthetase N-terminus RPIC_RS10030 PF13193 AMP-binding enzyme C-terminal domain RPIC_RS10035 PF01464 Transglycosylase SLT domain RPIC_RS10035 PF01476 LysM domain RPIC_RS10040 PF16123 Hydroxyacylglutathione hydrolase C-terminus RPIC_RS10040 PF00753 Metallo-beta-lactamase superfamily RPIC_RS10045 PF08241 Methyltransferase domain RPIC_RS10050 PF00075 RNase H RPIC_RS10060 PF00959 Phage lysozyme RPIC_RS10075 PF00072 Response regulator receiver domain RPIC_RS10075 PF00196 Bacterial regulatory proteins, luxR family RPIC_RS10085 PF04293 SpoVR like protein RPIC_RS10090 PF04285 Protein of unknown function (DUF444) RPIC_RS10095 PF06798 PrkA serine protein kinase C-terminal domain RPIC_RS10095 PF08298 PrkA AAA domain RPIC_RS10100 PF03466 LysR substrate binding domain RPIC_RS10100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS10105 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPIC_RS10105 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RPIC_RS10110 PF00941 FAD binding domain in molybdopterin dehydrogenase RPIC_RS10110 PF03450 CO dehydrogenase flavoprotein C-terminal domain RPIC_RS10115 PF00111 2Fe-2S iron-sulfur cluster binding domain RPIC_RS10115 PF01799 [2Fe-2S] binding domain RPIC_RS10120 PF13193 AMP-binding enzyme C-terminal domain RPIC_RS10120 PF00501 AMP-binding enzyme RPIC_RS10135 PF00132 Bacterial transferase hexapeptide (six repeats) RPIC_RS10140 PF13609 Gram-negative porin RPIC_RS10145 PF02515 CoA-transferase family III RPIC_RS10150 PF00682 HMGL-like RPIC_RS10160 PF07690 Major Facilitator Superfamily RPIC_RS10175 PF01527 Transposase RPIC_RS10185 PF00589 Phage integrase family RPIC_RS10185 PF13356 Arm DNA-binding domain RPIC_RS10195 PF00929 Exonuclease RPIC_RS10200 PF00551 Formyl transferase RPIC_RS10235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS10235 PF03466 LysR substrate binding domain RPIC_RS10240 PF13454 FAD-NAD(P)-binding RPIC_RS10245 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS10250 PF12911 N-terminal TM domain of oligopeptide transport permease C RPIC_RS10250 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS10255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RPIC_RS10255 PF00005 ABC transporter RPIC_RS10260 PF00005 ABC transporter RPIC_RS10260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RPIC_RS10265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RPIC_RS10280 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RPIC_RS10285 PF01799 [2Fe-2S] binding domain RPIC_RS10285 PF00111 2Fe-2S iron-sulfur cluster binding domain RPIC_RS10300 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain RPIC_RS10300 PF02129 X-Pro dipeptidyl-peptidase (S15 family) RPIC_RS10305 PF02203 Tar ligand binding domain homologue RPIC_RS10305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC_RS10305 PF00672 HAMP domain RPIC_RS10320 PF00474 Sodium:solute symporter family RPIC_RS10325 PF16177 Acetyl-coenzyme A synthetase N-terminus RPIC_RS10325 PF00501 AMP-binding enzyme RPIC_RS10325 PF13193 AMP-binding enzyme C-terminal domain RPIC_RS10330 PF00892 EamA-like transporter family RPIC_RS10335 PF03350 Uncharacterized protein family, UPF0114 RPIC_RS10345 PF01177 Asp/Glu/Hydantoin racemase RPIC_RS10350 PF00375 Sodium:dicarboxylate symporter family RPIC_RS10375 PF00027 Cyclic nucleotide-binding domain RPIC_RS10375 PF13545 Crp-like helix-turn-helix domain RPIC_RS10380 PF08859 DGC domain RPIC_RS10385 PF02036 SCP-2 sterol transfer family RPIC_RS10390 PF01136 Peptidase family U32 RPIC_RS10395 PF01136 Peptidase family U32 RPIC_RS10405 PF00004 ATPase family associated with various cellular activities (AAA) RPIC_RS10405 PF17862 AAA+ lid domain RPIC_RS10405 PF06480 FtsH Extracellular RPIC_RS10405 PF01434 Peptidase family M41 RPIC_RS10415 PF01618 MotA/TolQ/ExbB proton channel family RPIC_RS10420 PF02472 Biopolymer transport protein ExbD/TolR RPIC_RS10430 PF03928 Haem-degrading RPIC_RS10465 PF00005 ABC transporter RPIC_RS10470 PF01061 ABC-2 type transporter RPIC_RS10475 PF00156 Phosphoribosyl transferase domain RPIC_RS10490 PF02875 Mur ligase family, glutamate ligase domain RPIC_RS10490 PF08245 Mur ligase middle domain RPIC_RS10495 PF01039 Carboxyl transferase domain RPIC_RS10495 PF17848 Acetyl-coA carboxylase zinc finger domain RPIC_RS10500 PF00290 Tryptophan synthase alpha chain RPIC_RS10505 PF01555 DNA methylase RPIC_RS10510 PF00291 Pyridoxal-phosphate dependent enzyme RPIC_RS10515 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RPIC_RS10520 PF01416 tRNA pseudouridine synthase RPIC_RS10530 PF02774 Semialdehyde dehydrogenase, dimerisation domain RPIC_RS10530 PF01118 Semialdehyde dehydrogenase, NAD binding domain RPIC_RS10535 PF00180 Isocitrate/isopropylmalate dehydrogenase RPIC_RS10540 PF00694 Aconitase C-terminal domain RPIC_RS10545 PF00330 Aconitase family (aconitate hydratase) RPIC_RS10550 PF00285 Citrate synthase, C-terminal domain RPIC_RS10555 PF03937 Flavinator of succinate dehydrogenase RPIC_RS10560 PF13085 2Fe-2S iron-sulfur cluster binding domain RPIC_RS10565 PF02910 Fumarate reductase flavoprotein C-term RPIC_RS10565 PF00890 FAD binding domain RPIC_RS10570 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RPIC_RS10580 PF00155 Aminotransferase class I and II RPIC_RS10580 PF00392 Bacterial regulatory proteins, gntR family RPIC_RS10585 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RPIC_RS10585 PF00056 lactate/malate dehydrogenase, NAD binding domain RPIC_RS10610 PF00694 Aconitase C-terminal domain RPIC_RS10610 PF00330 Aconitase family (aconitate hydratase) RPIC_RS10620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RPIC_RS10630 PF00246 Zinc carboxypeptidase RPIC_RS10630 PF18027 Cytosolic carboxypeptidase N-terminal domain RPIC_RS10635 PF03883 Peroxide stress protein YaaA RPIC_RS10645 PF00155 Aminotransferase class I and II RPIC_RS10650 PF13417 Glutathione S-transferase, N-terminal domain RPIC_RS10650 PF14497 Glutathione S-transferase, C-terminal domain RPIC_RS10655 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RPIC_RS10655 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain RPIC_RS10655 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RPIC_RS10660 PF00378 Enoyl-CoA hydratase/isomerase RPIC_RS10685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS10685 PF03466 LysR substrate binding domain RPIC_RS10690 PF03466 LysR substrate binding domain RPIC_RS10690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS10700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC_RS10700 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC_RS10700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC_RS10705 PF00043 Glutathione S-transferase, C-terminal domain RPIC_RS10705 PF02798 Glutathione S-transferase, N-terminal domain RPIC_RS10720 PF02492 CobW/HypB/UreG, nucleotide-binding domain RPIC_RS10725 PF01730 UreF RPIC_RS10730 PF02814 UreE urease accessory protein, N-terminal domain RPIC_RS10730 PF05194 UreE urease accessory protein, C-terminal domain RPIC_RS10735 PF01979 Amidohydrolase family RPIC_RS10735 PF00449 Urease alpha-subunit, N-terminal domain RPIC_RS10740 PF00699 Urease beta subunit RPIC_RS10750 PF00547 Urease, gamma subunit RPIC_RS10755 PF01774 UreD urease accessory protein RPIC_RS10760 PF00005 ABC transporter RPIC_RS10765 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPIC_RS10765 PF00005 ABC transporter RPIC_RS10770 PF02653 Branched-chain amino acid transport system / permease component RPIC_RS10775 PF02653 Branched-chain amino acid transport system / permease component RPIC_RS10785 PF01575 MaoC like domain RPIC_RS10790 PF00171 Aldehyde dehydrogenase family RPIC_RS10790 PF01575 MaoC like domain RPIC_RS10795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC_RS10795 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC_RS10795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC_RS10800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC_RS10800 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC_RS10800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC_RS10810 PF00293 NUDIX domain RPIC_RS10820 PF00361 Proton-conducting membrane transporter RPIC_RS10825 PF00361 Proton-conducting membrane transporter RPIC_RS10825 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus RPIC_RS10830 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RPIC_RS10830 PF00361 Proton-conducting membrane transporter RPIC_RS10835 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RPIC_RS10840 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RPIC_RS10845 PF12838 4Fe-4S dicluster domain RPIC_RS10850 PF00146 NADH dehydrogenase RPIC_RS10855 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal RPIC_RS10855 PF00384 Molybdopterin oxidoreductase RPIC_RS10855 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RPIC_RS10860 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RPIC_RS10860 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RPIC_RS10860 PF10531 SLBB domain RPIC_RS10870 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RPIC_RS10875 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RPIC_RS10880 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RPIC_RS10885 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RPIC_RS10895 PF03840 Preprotein translocase SecG subunit RPIC_RS10900 PF00121 Triosephosphate isomerase RPIC_RS10915 PF03725 3' exoribonuclease family, domain 2 RPIC_RS10915 PF00575 S1 RNA binding domain RPIC_RS10915 PF00013 KH domain RPIC_RS10915 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RPIC_RS10915 PF01138 3' exoribonuclease family, domain 1 RPIC_RS10920 PF00312 Ribosomal protein S15 RPIC_RS10925 PF13458 Periplasmic binding protein RPIC_RS10935 PF00682 HMGL-like RPIC_RS10935 PF08502 LeuA allosteric (dimerisation) domain RPIC_RS10940 PF01066 CDP-alcohol phosphatidyltransferase RPIC_RS10945 PF02666 Phosphatidylserine decarboxylase RPIC_RS10950 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RPIC_RS10950 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RPIC_RS10955 PF10369 Small subunit of acetolactate synthase RPIC_RS10960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPIC_RS10960 PF00205 Thiamine pyrophosphate enzyme, central domain RPIC_RS10960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPIC_RS10995 PF13439 Glycosyltransferase Family 4 RPIC_RS10995 PF00534 Glycosyl transferases group 1 RPIC_RS11000 PF01219 Prokaryotic diacylglycerol kinase RPIC_RS11005 PF08359 YsiA-like protein, C-terminal region RPIC_RS11005 PF00440 Bacterial regulatory proteins, tetR family RPIC_RS11010 PF03641 Possible lysine decarboxylase RPIC_RS11040 PF12849 PBP superfamily domain RPIC_RS11045 PF03466 LysR substrate binding domain RPIC_RS11045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS11050 PF00111 2Fe-2S iron-sulfur cluster binding domain RPIC_RS11050 PF01799 [2Fe-2S] binding domain RPIC_RS11055 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPIC_RS11055 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RPIC_RS11065 PF00962 Adenosine/AMP deaminase RPIC_RS11070 PF01979 Amidohydrolase family RPIC_RS11075 PF01169 Uncharacterized protein family UPF0016 RPIC_RS11090 PF13296 Putative type VI secretion system Rhs element Vgr RPIC_RS11090 PF04717 Type VI secretion system, phage-baseplate injector RPIC_RS11090 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) RPIC_RS11105 PF00576 HIUase/Transthyretin family RPIC_RS11110 PF07729 FCD domain RPIC_RS11110 PF00392 Bacterial regulatory proteins, gntR family RPIC_RS11115 PF00860 Permease family RPIC_RS11120 PF01979 Amidohydrolase family RPIC_RS11130 PF09349 OHCU decarboxylase RPIC_RS11130 PF01014 Uricase RPIC_RS11135 PF13609 Gram-negative porin RPIC_RS11140 PF01515 Phosphate acetyl/butaryl transferase RPIC_RS11140 PF03949 Malic enzyme, NAD binding domain RPIC_RS11140 PF00390 Malic enzyme, N-terminal domain RPIC_RS11150 PF01433 Peptidase family M1 domain RPIC_RS11150 PF11940 Domain of unknown function (DUF3458) Ig-like fold RPIC_RS11150 PF17432 Domain of unknown function (DUF3458_C) ARM repeats RPIC_RS11155 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain RPIC_RS11165 PF01476 LysM domain RPIC_RS11165 PF04972 BON domain RPIC_RS11170 PF10503 Esterase PHB depolymerase RPIC_RS11185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS11185 PF03466 LysR substrate binding domain RPIC_RS11195 PF03449 Transcription elongation factor, N-terminal RPIC_RS11195 PF01272 Transcription elongation factor, GreA/GreB, C-term RPIC_RS11205 PF13291 ACT domain RPIC_RS11205 PF04607 Region found in RelA / SpoT proteins RPIC_RS11205 PF02824 TGS domain RPIC_RS11210 PF01192 RNA polymerase Rpb6 RPIC_RS11215 PF00625 Guanylate kinase RPIC_RS11220 PF08340 Domain of unknown function (DUF1732) RPIC_RS11220 PF03755 YicC-like family, N-terminal region RPIC_RS11225 PF00069 Protein kinase domain RPIC_RS11225 PF08239 Bacterial SH3 domain RPIC_RS11235 PF01138 3' exoribonuclease family, domain 1 RPIC_RS11235 PF03725 3' exoribonuclease family, domain 2 RPIC_RS11240 PF01725 Ham1 family RPIC_RS11245 PF04055 Radical SAM superfamily RPIC_RS11245 PF06969 HemN C-terminal domain RPIC_RS11275 PF00684 DnaJ central domain RPIC_RS11275 PF01556 DnaJ C terminal domain RPIC_RS11275 PF00226 DnaJ domain RPIC_RS11280 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RPIC_RS11280 PF10135 Rod binding protein RPIC_RS11470 PF03796 DnaB-like helicase C terminal domain RPIC_RS11470 PF00772 DnaB-like helicase N terminal domain RPIC_RS11665 PF01470 Pyroglutamyl peptidase RPIC_RS11685 PF03746 LamB/YcsF family RPIC_RS11690 PF02626 Carboxyltransferase domain, subdomain A and B RPIC_RS11695 PF02682 Carboxyltransferase domain, subdomain C and D RPIC_RS11700 PF07690 Major Facilitator Superfamily RPIC_RS11705 PF00005 ABC transporter RPIC_RS11710 PF02653 Branched-chain amino acid transport system / permease component RPIC_RS11715 PF02653 Branched-chain amino acid transport system / permease component RPIC_RS11720 PF02608 ABC transporter substrate-binding protein PnrA-like RPIC_RS11730 PF00107 Zinc-binding dehydrogenase RPIC_RS11730 PF08240 Alcohol dehydrogenase GroES-like domain RPIC_RS11735 PF02142 MGS-like domain RPIC_RS11745 PF00892 EamA-like transporter family RPIC_RS11750 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RPIC_RS11760 PF05872 Bacterial protein of unknown function (DUF853) RPIC_RS11765 PF01709 Transcriptional regulator RPIC_RS11770 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RPIC_RS11770 PF02843 Phosphoribosylglycinamide synthetase, C domain RPIC_RS11770 PF02844 Phosphoribosylglycinamide synthetase, N domain RPIC_RS11775 PF01218 Coproporphyrinogen III oxidase RPIC_RS11780 PF01467 Cytidylyltransferase-like RPIC_RS11790 PF02590 Predicted SPOUT methyltransferase RPIC_RS11795 PF02545 Maf-like protein RPIC_RS11800 PF00575 S1 RNA binding domain RPIC_RS11800 PF10150 Ribonuclease E/G family RPIC_RS11810 PF00005 ABC transporter RPIC_RS11810 PF00664 ABC transporter transmembrane region RPIC_RS11820 PF00535 Glycosyl transferase family 2 RPIC_RS11825 PF00535 Glycosyl transferase family 2 RPIC_RS11835 PF13439 Glycosyltransferase Family 4 RPIC_RS11835 PF00534 Glycosyl transferases group 1 RPIC_RS11840 PF01336 OB-fold nucleic acid binding domain RPIC_RS11840 PF02811 PHP domain RPIC_RS11840 PF14579 Helix-hairpin-helix motif RPIC_RS11840 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RPIC_RS11840 PF07733 Bacterial DNA polymerase III alpha NTPase domain RPIC_RS11845 PF17773 UPF0176 acylphosphatase like domain RPIC_RS11850 PF03358 NADPH-dependent FMN reductase RPIC_RS11855 PF17954 Quercetinase C-terminal cupin domain RPIC_RS11855 PF02678 Pirin RPIC_RS11860 PF03466 LysR substrate binding domain RPIC_RS11860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS11865 PF00749 tRNA synthetases class I (E and Q), catalytic domain RPIC_RS11870 PF00271 Helicase conserved C-terminal domain RPIC_RS11870 PF00270 DEAD/DEAH box helicase RPIC_RS11875 PF01613 Flavin reductase like domain RPIC_RS11875 PF00258 Flavodoxin RPIC_RS11885 PF13193 AMP-binding enzyme C-terminal domain RPIC_RS11885 PF00501 AMP-binding enzyme RPIC_RS11890 PF02785 Biotin carboxylase C-terminal domain RPIC_RS11890 PF00289 Biotin carboxylase, N-terminal domain RPIC_RS11890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPIC_RS11895 PF13458 Periplasmic binding protein RPIC_RS11900 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RPIC_RS11900 PF00753 Metallo-beta-lactamase superfamily RPIC_RS11900 PF10996 Beta-Casp domain RPIC_RS11910 PF03922 OmpW family RPIC_RS11930 PF00140 Sigma-70 factor, region 1.2 RPIC_RS11930 PF03979 Sigma-70 factor, region 1.1 RPIC_RS11930 PF04539 Sigma-70 region 3 RPIC_RS11930 PF04545 Sigma-70, region 4 RPIC_RS11930 PF04542 Sigma-70 region 2 RPIC_RS11930 PF04546 Sigma-70, non-essential region RPIC_RS11935 PF10410 DnaB-helicase binding domain of primase RPIC_RS11935 PF08275 DNA primase catalytic core, N-terminal domain RPIC_RS11935 PF01807 CHC2 zinc finger RPIC_RS11935 PF08278 DNA primase DnaG DnaB-binding RPIC_RS11950 PF00814 Glycoprotease family RPIC_RS11955 PF02649 Type I GTP cyclohydrolase folE2 RPIC_RS11960 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RPIC_RS11960 PF02779 Transketolase, pyrimidine binding domain RPIC_RS11960 PF02780 Transketolase, C-terminal domain RPIC_RS11965 PF00348 Polyprenyl synthetase RPIC_RS11970 PF02609 Exonuclease VII small subunit RPIC_RS11985 PF00581 Rhodanese-like domain RPIC_RS11995 PF01738 Dienelactone hydrolase family RPIC_RS12000 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC_RS12005 PF01367 5'-3' exonuclease, C-terminal SAM fold RPIC_RS12005 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RPIC_RS12005 PF00476 DNA polymerase family A RPIC_RS12005 PF01612 3'-5' exonuclease RPIC_RS12010 PF03641 Possible lysine decarboxylase RPIC_RS12020 PF01636 Phosphotransferase enzyme family RPIC_RS12030 PF00580 UvrD/REP helicase N-terminal domain RPIC_RS12030 PF13361 UvrD-like helicase C-terminal domain RPIC_RS12035 PF10458 Valyl tRNA synthetase tRNA binding arm RPIC_RS12035 PF00133 tRNA synthetases class I (I, L, M and V) RPIC_RS12035 PF08264 Anticodon-binding domain of tRNA RPIC_RS12040 PF00483 Nucleotidyl transferase RPIC_RS12050 PF01176 Translation initiation factor 1A / IF-1 RPIC_RS12060 PF03537 Glycoside-hydrolase family GH114 RPIC_RS12065 PF01494 FAD binding domain RPIC_RS12070 PF03466 LysR substrate binding domain RPIC_RS12070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS12075 PF13458 Periplasmic binding protein RPIC_RS12080 PF00005 ABC transporter RPIC_RS12085 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPIC_RS12085 PF00005 ABC transporter RPIC_RS12100 PF02627 Carboxymuconolactone decarboxylase family RPIC_RS12105 PF12146 Serine aminopeptidase, S33 RPIC_RS12110 PF10397 Adenylosuccinate lyase C-terminus RPIC_RS12110 PF00206 Lyase RPIC_RS12115 PF00108 Thiolase, N-terminal domain RPIC_RS12115 PF02803 Thiolase, C-terminal domain RPIC_RS12120 PF01144 Coenzyme A transferase RPIC_RS12125 PF01144 Coenzyme A transferase RPIC_RS12130 PF01614 Bacterial transcriptional regulator RPIC_RS12130 PF09339 IclR helix-turn-helix domain RPIC_RS12140 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC_RS12145 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS12150 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS12155 PF00005 ABC transporter RPIC_RS12160 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC_RS12165 PF01266 FAD dependent oxidoreductase RPIC_RS12205 PF01595 Cyclin M transmembrane N-terminal domain RPIC_RS12205 PF00571 CBS domain RPIC_RS12205 PF03471 Transporter associated domain RPIC_RS12210 PF02627 Carboxymuconolactone decarboxylase family RPIC_RS12215 PF13411 MerR HTH family regulatory protein RPIC_RS12250 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPIC_RS12255 PF02954 Bacterial regulatory protein, Fis family RPIC_RS12255 PF00158 Sigma-54 interaction domain RPIC_RS12255 PF01590 GAF domain RPIC_RS12260 PF00561 alpha/beta hydrolase fold RPIC_RS12265 PF08042 PqqA family RPIC_RS12270 PF12706 Beta-lactamase superfamily domain RPIC_RS12275 PF03070 TENA/THI-4/PQQC family RPIC_RS12280 PF05402 Coenzyme PQQ synthesis protein D (PqqD) RPIC_RS12285 PF13186 Iron-sulfur cluster-binding domain RPIC_RS12285 PF04055 Radical SAM superfamily RPIC_RS12290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPIC_RS12295 PF13360 PQQ-like domain RPIC_RS12295 PF01011 PQQ enzyme repeat RPIC_RS12315 PF00171 Aldehyde dehydrogenase family RPIC_RS12335 PF13609 Gram-negative porin RPIC_RS12340 PF01553 Acyltransferase RPIC_RS12375 PF13545 Crp-like helix-turn-helix domain RPIC_RS12375 PF00027 Cyclic nucleotide-binding domain RPIC_RS12385 PF13085 2Fe-2S iron-sulfur cluster binding domain RPIC_RS12395 PF07690 Major Facilitator Superfamily RPIC_RS12405 PF02665 Nitrate reductase gamma subunit RPIC_RS12410 PF02613 Nitrate reductase delta subunit RPIC_RS12415 PF13247 4Fe-4S dicluster domain RPIC_RS12415 PF14711 Respiratory nitrate reductase beta C-terminal RPIC_RS12420 PF00384 Molybdopterin oxidoreductase RPIC_RS12420 PF01568 Molydopterin dinucleotide binding domain RPIC_RS12420 PF14710 Respiratory nitrate reductase alpha N-terminal RPIC_RS12425 PF13276 HTH-like domain RPIC_RS12425 PF13683 Integrase core domain RPIC_RS12430 PF03458 UPF0126 domain RPIC_RS12435 PF07687 Peptidase dimerisation domain RPIC_RS12435 PF01546 Peptidase family M20/M25/M40 RPIC_RS12455 PF08534 Redoxin RPIC_RS12465 PF16123 Hydroxyacylglutathione hydrolase C-terminus RPIC_RS12465 PF00753 Metallo-beta-lactamase superfamily RPIC_RS12475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPIC_RS12485 PF05199 GMC oxidoreductase RPIC_RS12485 PF00732 GMC oxidoreductase RPIC_RS12495 PF00034 Cytochrome c RPIC_RS12550 PF00239 Resolvase, N terminal domain RPIC_RS12550 PF02796 Helix-turn-helix domain of resolvase RPIC_RS12560 PF02403 Seryl-tRNA synthetase N-terminal domain RPIC_RS12560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RPIC_RS12565 PF16193 AAA C-terminal domain RPIC_RS12565 PF00004 ATPase family associated with various cellular activities (AAA) RPIC_RS12565 PF12002 MgsA AAA+ ATPase C terminal RPIC_RS12570 PF03466 LysR substrate binding domain RPIC_RS12570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS12580 PF03548 Outer membrane lipoprotein carrier protein LolA RPIC_RS12585 PF09397 Ftsk gamma domain RPIC_RS12585 PF01580 FtsK/SpoIIIE family RPIC_RS12585 PF17854 FtsK alpha domain RPIC_RS12585 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RPIC_RS12590 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC_RS12595 PF00488 MutS domain V RPIC_RS12595 PF01713 Smr domain RPIC_RS12600 PF03458 UPF0126 domain RPIC_RS12605 PF00543 Nitrogen regulatory protein P-II RPIC_RS12615 PF00795 Carbon-nitrogen hydrolase RPIC_RS12615 PF02540 NAD synthase RPIC_RS12630 PF00719 Inorganic pyrophosphatase RPIC_RS12635 PF00171 Aldehyde dehydrogenase family RPIC_RS12645 PF07690 Major Facilitator Superfamily RPIC_RS12655 PF02602 Uroporphyrinogen-III synthase HemD RPIC_RS12660 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RPIC_RS12660 PF03900 Porphobilinogen deaminase, C-terminal domain RPIC_RS12665 PF00311 Phosphoenolpyruvate carboxylase RPIC_RS12680 PF04542 Sigma-70 region 2 RPIC_RS12680 PF08281 Sigma-70, region 4 RPIC_RS12690 PF14698 Argininosuccinate lyase C-terminal RPIC_RS12690 PF00206 Lyase RPIC_RS12695 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RPIC_RS12695 PF01276 Orn/Lys/Arg decarboxylase, major domain RPIC_RS12695 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RPIC_RS12700 PF00692 dUTPase RPIC_RS12705 PF02634 FdhD/NarQ family RPIC_RS12710 PF00080 Copper/zinc superoxide dismutase (SODC) RPIC_RS12730 PF13247 4Fe-4S dicluster domain RPIC_RS12735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RPIC_RS12735 PF01568 Molydopterin dinucleotide binding domain RPIC_RS12735 PF00384 Molybdopterin oxidoreductase RPIC_RS12765 PF10609 NUBPL iron-transfer P-loop NTPase RPIC_RS12770 PF00691 OmpA family RPIC_RS12770 PF05736 OprF membrane domain RPIC_RS12775 PF09334 tRNA synthetases class I (M) RPIC_RS12775 PF01588 Putative tRNA binding domain RPIC_RS12785 PF04357 TamB, inner membrane protein subunit of TAM complex RPIC_RS12790 PF17243 POTRA domain TamA domain 1 RPIC_RS12790 PF01103 Surface antigen RPIC_RS12790 PF07244 Surface antigen variable number repeat RPIC_RS12800 PF02616 Segregation and condensation protein ScpA RPIC_RS12805 PF02569 Pantoate-beta-alanine ligase RPIC_RS12815 PF06250 YhcG PDDEXK nuclease domain RPIC_RS12815 PF17761 DUF1016 N-terminal domain RPIC_RS12860 PF06067 Domain of unknown function (DUF932) RPIC_RS12865 PF02195 ParB-like nuclease domain RPIC_RS12880 PF05284 Protein of unknown function (DUF736) RPIC_RS12910 PF13614 AAA domain RPIC_RS12925 PF10502 Signal peptidase, peptidase S26 RPIC_RS12940 PF00106 short chain dehydrogenase RPIC_RS12945 PF00378 Enoyl-CoA hydratase/isomerase RPIC_RS12950 PF00108 Thiolase, N-terminal domain RPIC_RS12950 PF02803 Thiolase, C-terminal domain RPIC_RS12955 PF13193 AMP-binding enzyme C-terminal domain RPIC_RS12955 PF00501 AMP-binding enzyme RPIC_RS12960 PF02515 CoA-transferase family III RPIC_RS12965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC_RS12965 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC_RS12965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC_RS12985 PF07690 Major Facilitator Superfamily RPIC_RS12990 PF12806 Acetyl-CoA dehydrogenase C-terminal like RPIC_RS12990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC_RS12990 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC_RS12990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC_RS12995 PF01012 Electron transfer flavoprotein domain RPIC_RS13000 PF01012 Electron transfer flavoprotein domain RPIC_RS13000 PF00766 Electron transfer flavoprotein FAD-binding domain RPIC_RS13005 PF03466 LysR substrate binding domain RPIC_RS13005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS13015 PF02534 Type IV secretory system Conjugative DNA transfer RPIC_RS13025 PF00437 Type II/IV secretion system protein RPIC_RS13030 PF04956 TrbC/VIRB2 family RPIC_RS13040 PF03135 CagE, TrbE, VirB family, component of type IV transporter system RPIC_RS13060 PF03524 Conjugal transfer protein RPIC_RS13065 PF03743 Bacterial conjugation TrbI-like protein RPIC_RS13080 PF07685 CobB/CobQ-like glutamine amidotransferase domain RPIC_RS13080 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RPIC_RS13085 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RPIC_RS13090 PF03186 CobD/Cbib protein RPIC_RS13090 PF17113 Regulatory signalling modulator protein AmpE RPIC_RS13095 PF00155 Aminotransferase class I and II RPIC_RS13100 PF01497 Periplasmic binding protein RPIC_RS13105 PF13456 Reverse transcriptase-like RPIC_RS13105 PF00300 Histidine phosphatase superfamily (branch 1) RPIC_RS13110 PF02654 Cobalamin-5-phosphate synthase RPIC_RS13115 PF02277 Phosphoribosyltransferase RPIC_RS13120 PF12557 Cob(I)alamin adenosyltransferase N terminal RPIC_RS13120 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RPIC_RS13125 PF00005 ABC transporter RPIC_RS13130 PF01032 FecCD transport family RPIC_RS13135 PF07715 TonB-dependent Receptor Plug Domain RPIC_RS13135 PF00593 TonB dependent receptor RPIC_RS13160 PF13276 HTH-like domain RPIC_RS13160 PF13333 Integrase core domain RPIC_RS13160 PF00665 Integrase core domain RPIC_RS13170 PF01790 Prolipoprotein diacylglyceryl transferase RPIC_RS13175 PF03466 LysR substrate binding domain RPIC_RS13175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS13180 PF00920 Dehydratase family RPIC_RS13190 PF04364 DNA polymerase III chi subunit, HolC RPIC_RS13195 PF00883 Cytosol aminopeptidase family, catalytic domain RPIC_RS13195 PF02789 Cytosol aminopeptidase family, N-terminal domain RPIC_RS13220 PF14824 Sirohaem biosynthesis protein central RPIC_RS13220 PF10414 Sirohaem synthase dimerisation region RPIC_RS13220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPIC_RS13225 PF00009 Elongation factor Tu GTP binding domain RPIC_RS13230 PF01507 Phosphoadenosine phosphosulfate reductase family RPIC_RS13235 PF01507 Phosphoadenosine phosphosulfate reductase family RPIC_RS13245 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RPIC_RS13245 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RPIC_RS13250 PF01925 Sulfite exporter TauE/SafE RPIC_RS13255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS13255 PF03466 LysR substrate binding domain RPIC_RS13265 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RPIC_RS13265 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RPIC_RS13275 PF00920 Dehydratase family RPIC_RS13280 PF00248 Aldo/keto reductase family RPIC_RS13285 PF07690 Major Facilitator Superfamily RPIC_RS13300 PF00072 Response regulator receiver domain RPIC_RS13300 PF00990 Diguanylate cyclase, GGDEF domain RPIC_RS13310 PF00970 Oxidoreductase FAD-binding domain RPIC_RS13310 PF00111 2Fe-2S iron-sulfur cluster binding domain RPIC_RS13310 PF00175 Oxidoreductase NAD-binding domain RPIC_RS13315 PF00202 Aminotransferase class-III RPIC_RS13325 PF00005 ABC transporter RPIC_RS13330 PF00005 ABC transporter RPIC_RS13330 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPIC_RS13335 PF11862 Domain of unknown function (DUF3382) RPIC_RS13335 PF02653 Branched-chain amino acid transport system / permease component RPIC_RS13340 PF02653 Branched-chain amino acid transport system / permease component RPIC_RS13345 PF13458 Periplasmic binding protein RPIC_RS13350 PF02401 LytB protein RPIC_RS13355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RPIC_RS13360 PF04002 RadC-like JAB domain RPIC_RS13365 PF00830 Ribosomal L28 family RPIC_RS13370 PF00471 Ribosomal protein L33 RPIC_RS13375 PF02910 Fumarate reductase flavoprotein C-term RPIC_RS13375 PF00890 FAD binding domain RPIC_RS13380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RPIC_RS13380 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RPIC_RS13385 PF02445 Quinolinate synthetase A protein RPIC_RS13395 PF00924 Mechanosensitive ion channel RPIC_RS13395 PF12795 Mechanosensitive ion channel porin domain RPIC_RS13395 PF12794 Mechanosensitive ion channel inner membrane domain 1 RPIC_RS13400 PF13091 PLD-like domain RPIC_RS13405 PF01189 16S rRNA methyltransferase RsmB/F RPIC_RS13405 PF01029 NusB family RPIC_RS13410 PF00551 Formyl transferase RPIC_RS13415 PF00196 Bacterial regulatory proteins, luxR family RPIC_RS13415 PF00072 Response regulator receiver domain RPIC_RS13420 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS13420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS13420 PF18415 Histidine kinase receptor ArcB trans-membrane domain RPIC_RS13425 PF01687 Riboflavin kinase RPIC_RS13425 PF06574 FAD synthetase RPIC_RS13430 PF08264 Anticodon-binding domain of tRNA RPIC_RS13430 PF00133 tRNA synthetases class I (I, L, M and V) RPIC_RS13430 PF06827 Zinc finger found in FPG and IleRS RPIC_RS13435 PF01252 Signal peptidase (SPase) II RPIC_RS13450 PF04127 DNA / pantothenate metabolism flavoprotein RPIC_RS13450 PF02441 Flavoprotein RPIC_RS13455 PF00296 Luciferase-like monooxygenase RPIC_RS13460 PF00692 dUTPase RPIC_RS13465 PF10431 C-terminal, D2-small domain, of ClpB protein RPIC_RS13465 PF17871 AAA lid domain RPIC_RS13465 PF00004 ATPase family associated with various cellular activities (AAA) RPIC_RS13465 PF02861 Clp amino terminal domain, pathogenicity island component RPIC_RS13465 PF07724 AAA domain (Cdc48 subfamily) RPIC_RS13470 PF02617 ATP-dependent Clp protease adaptor protein ClpS RPIC_RS13475 PF00313 'Cold-shock' DNA-binding domain RPIC_RS13550 PF13356 Arm DNA-binding domain RPIC_RS13550 PF00589 Phage integrase family RPIC_RS13555 PF00180 Isocitrate/isopropylmalate dehydrogenase RPIC_RS13575 PF00034 Cytochrome c RPIC_RS13575 PF03150 Di-haem cytochrome c peroxidase RPIC_RS13585 PF12706 Beta-lactamase superfamily domain RPIC_RS13590 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme RPIC_RS13595 PF03466 LysR substrate binding domain RPIC_RS13595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS13600 PF03466 LysR substrate binding domain RPIC_RS13600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS13610 PF07690 Major Facilitator Superfamily RPIC_RS13615 PF07681 DoxX RPIC_RS13620 PF03466 LysR substrate binding domain RPIC_RS13620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS13630 PF07690 Major Facilitator Superfamily RPIC_RS13640 PF00701 Dihydrodipicolinate synthetase family RPIC_RS13650 PF04228 Putative neutral zinc metallopeptidase RPIC_RS13660 PF02805 Metal binding domain of Ada RPIC_RS13660 PF06029 AlkA N-terminal domain RPIC_RS13660 PF12833 Helix-turn-helix domain RPIC_RS13660 PF00730 HhH-GPD superfamily base excision DNA repair protein RPIC_RS13665 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RPIC_RS13665 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RPIC_RS13685 PF07687 Peptidase dimerisation domain RPIC_RS13685 PF01546 Peptidase family M20/M25/M40 RPIC_RS13690 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC_RS13710 PF11871 Domain of unknown function (DUF3391) RPIC_RS13710 PF01966 HD domain RPIC_RS13715 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS13730 PF13333 Integrase core domain RPIC_RS13730 PF00665 Integrase core domain RPIC_RS13730 PF13276 HTH-like domain RPIC_RS13745 PF07690 Major Facilitator Superfamily RPIC_RS13755 PF00216 Bacterial DNA-binding protein RPIC_RS13765 PF00491 Arginase family RPIC_RS13770 PF00005 ABC transporter RPIC_RS13775 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS13780 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC_RS13805 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RPIC_RS13805 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RPIC_RS13810 PF02601 Exonuclease VII, large subunit RPIC_RS13810 PF13742 OB-fold nucleic acid binding domain RPIC_RS13815 PF01618 MotA/TolQ/ExbB proton channel family RPIC_RS13825 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RPIC_RS13830 PF03966 Trm112p-like protein RPIC_RS13835 PF02348 Cytidylyltransferase RPIC_RS13840 PF05191 Adenylate kinase, active site lid RPIC_RS13845 PF00106 short chain dehydrogenase RPIC_RS13850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS13850 PF03466 LysR substrate binding domain RPIC_RS13855 PF13593 SBF-like CPA transporter family (DUF4137) RPIC_RS13865 PF11741 AMIN domain RPIC_RS13865 PF01520 N-acetylmuramoyl-L-alanine amidase RPIC_RS13870 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RPIC_RS13875 PF08331 Domain of unknown function (DUF1730) RPIC_RS13890 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RPIC_RS13890 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RPIC_RS13895 PF00589 Phage integrase family RPIC_RS13895 PF02899 Phage integrase, N-terminal SAM-like domain RPIC_RS13900 PF04073 Aminoacyl-tRNA editing domain RPIC_RS13905 PF02660 Glycerol-3-phosphate acyltransferase RPIC_RS13915 PF01804 Penicillin amidase RPIC_RS13920 PF04461 Protein of unknown function (DUF520) RPIC_RS13925 PF01565 FAD binding domain RPIC_RS13925 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RPIC_RS13930 PF06865 Pyrimidine/purine nucleoside phosphorylase RPIC_RS13935 PF00764 Arginosuccinate synthase RPIC_RS13940 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RPIC_RS13940 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RPIC_RS13950 PF01649 Ribosomal protein S20 RPIC_RS13955 PF03023 Lipid II flippase MurJ RPIC_RS13960 PF13369 Transglutaminase-like superfamily RPIC_RS13965 PF09335 SNARE associated Golgi protein RPIC_RS13970 PF01119 DNA mismatch repair protein, C-terminal domain RPIC_RS13970 PF08676 MutL C terminal dimerisation domain RPIC_RS13980 PF00583 Acetyltransferase (GNAT) family RPIC_RS13985 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA RPIC_RS13990 PF13532 2OG-Fe(II) oxygenase superfamily RPIC_RS14010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RPIC_RS14010 PF01568 Molydopterin dinucleotide binding domain RPIC_RS14010 PF00384 Molybdopterin oxidoreductase RPIC_RS14015 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) RPIC_RS14020 PF03264 NapC/NirT cytochrome c family, N-terminal region RPIC_RS14025 PF00005 ABC transporter RPIC_RS14030 PF03379 CcmB protein RPIC_RS14035 PF01578 Cytochrome C assembly protein RPIC_RS14040 PF03100 CcmE RPIC_RS14045 PF01578 Cytochrome C assembly protein RPIC_RS14045 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal RPIC_RS14050 PF08534 Redoxin RPIC_RS14055 PF03918 Cytochrome C biogenesis protein RPIC_RS14065 PF12833 Helix-turn-helix domain RPIC_RS14065 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RPIC_RS14065 PF02805 Metal binding domain of Ada RPIC_RS14065 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RPIC_RS14080 PF02769 AIR synthase related protein, C-terminal domain RPIC_RS14080 PF00586 AIR synthase related protein, N-terminal domain RPIC_RS14085 PF01594 AI-2E family transporter RPIC_RS14090 PF00308 Bacterial dnaA protein RPIC_RS14100 PF12626 Polymerase A arginine-rich C-terminus RPIC_RS14100 PF12627 Probable RNA and SrmB- binding site of polymerase A RPIC_RS14100 PF01743 Poly A polymerase head domain RPIC_RS14105 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RPIC_RS14115 PF02548 Ketopantoate hydroxymethyltransferase RPIC_RS14120 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS14125 PF08402 TOBE domain RPIC_RS14125 PF00005 ABC transporter RPIC_RS14130 PF04715 Anthranilate synthase component I, N terminal region RPIC_RS14130 PF00117 Glutamine amidotransferase class-I RPIC_RS14130 PF00425 chorismate binding enzyme RPIC_RS14135 PF00684 DnaJ central domain RPIC_RS14135 PF00226 DnaJ domain RPIC_RS14135 PF01556 DnaJ C terminal domain RPIC_RS14140 PF00012 Hsp70 protein RPIC_RS14145 PF02253 Phospholipase A1 RPIC_RS14150 PF14760 Rnk N-terminus RPIC_RS14150 PF01272 Transcription elongation factor, GreA/GreB, C-term RPIC_RS14160 PF01025 GrpE RPIC_RS14170 PF01479 S4 domain RPIC_RS14175 PF00762 Ferrochelatase RPIC_RS14180 PF01979 Amidohydrolase family RPIC_RS14185 PF00491 Arginase family RPIC_RS14190 PF00221 Aromatic amino acid lyase RPIC_RS14195 PF17392 Urocanase C-terminal domain RPIC_RS14195 PF01175 Urocanase Rossmann-like domain RPIC_RS14195 PF17391 Urocanase N-terminal domain RPIC_RS14200 PF07702 UTRA domain RPIC_RS14200 PF00392 Bacterial regulatory proteins, gntR family RPIC_RS14205 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS14210 PF00005 ABC transporter RPIC_RS14215 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RPIC_RS14220 PF01628 HrcA protein C terminal domain RPIC_RS14225 PF01513 ATP-NAD kinase RPIC_RS14230 PF02463 RecF/RecN/SMC N terminal domain RPIC_RS14240 PF04151 Bacterial pre-peptidase C-terminal domain RPIC_RS14240 PF00082 Subtilase family RPIC_RS14245 PF04151 Bacterial pre-peptidase C-terminal domain RPIC_RS14245 PF00082 Subtilase family RPIC_RS14255 PF03710 Glutamate-ammonia ligase adenylyltransferase RPIC_RS14255 PF08335 GlnD PII-uridylyltransferase RPIC_RS14265 PF00795 Carbon-nitrogen hydrolase RPIC_RS14270 PF01523 Putative modulator of DNA gyrase RPIC_RS14275 PF00793 DAHP synthetase I family RPIC_RS14280 PF00924 Mechanosensitive ion channel RPIC_RS14280 PF05552 Conserved TM helix RPIC_RS14285 PF01923 Cobalamin adenosyltransferase RPIC_RS14290 PF02913 FAD linked oxidases, C-terminal domain RPIC_RS14290 PF01565 FAD binding domain RPIC_RS14295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS14295 PF03466 LysR substrate binding domain RPIC_RS14300 PF01565 FAD binding domain RPIC_RS14300 PF02913 FAD linked oxidases, C-terminal domain RPIC_RS14305 PF01565 FAD binding domain RPIC_RS14310 PF02754 Cysteine-rich domain RPIC_RS14310 PF13183 4Fe-4S dicluster domain RPIC_RS14315 PF03788 LrgA family RPIC_RS14320 PF04172 LrgB-like family RPIC_RS14330 PF07883 Cupin domain RPIC_RS14340 PF00255 Glutathione peroxidase RPIC_RS14375 PF00437 Type II/IV secretion system protein RPIC_RS14380 PF00437 Type II/IV secretion system protein RPIC_RS14385 PF01168 Alanine racemase, N-terminal domain RPIC_RS14390 PF14748 Pyrroline-5-carboxylate reductase dimerisation RPIC_RS14390 PF03807 NADP oxidoreductase coenzyme F420-dependent RPIC_RS14395 PF01040 UbiA prenyltransferase family RPIC_RS14400 PF00141 Peroxidase RPIC_RS14405 PF00210 Ferritin-like domain RPIC_RS14415 PF05362 Lon protease (S16) C-terminal proteolytic domain RPIC_RS14415 PF02190 ATP-dependent protease La (LON) substrate-binding domain RPIC_RS14415 PF00004 ATPase family associated with various cellular activities (AAA) RPIC_RS14465 PF02583 Metal-sensitive transcriptional repressor RPIC_RS14470 PF01545 Cation efflux family RPIC_RS14480 PF01545 Cation efflux family RPIC_RS14480 PF16916 Dimerisation domain of Zinc Transporter RPIC_RS14485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS14485 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS14485 PF00989 PAS fold RPIC_RS14485 PF11808 Phosphate regulon sensor protein PhoR RPIC_RS14490 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS14490 PF00072 Response regulator receiver domain RPIC_RS14495 PF00873 AcrB/AcrD/AcrF family RPIC_RS14500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RPIC_RS14505 PF02321 Outer membrane efflux protein RPIC_RS14540 PF03466 LysR substrate binding domain RPIC_RS14540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS14545 PF00149 Calcineurin-like phosphoesterase RPIC_RS14550 PF00271 Helicase conserved C-terminal domain RPIC_RS14550 PF17191 RecG wedge domain RPIC_RS14550 PF00270 DEAD/DEAH box helicase RPIC_RS14555 PF02547 Queuosine biosynthesis protein RPIC_RS14560 PF01702 Queuine tRNA-ribosyltransferase RPIC_RS14565 PF02699 Preprotein translocase subunit RPIC_RS14570 PF07549 SecD/SecF GG Motif RPIC_RS14570 PF13721 SecD export protein N-terminal TM region RPIC_RS14570 PF02355 Protein export membrane protein RPIC_RS14575 PF07549 SecD/SecF GG Motif RPIC_RS14575 PF02355 Protein export membrane protein RPIC_RS14585 PF04264 YceI-like domain RPIC_RS14590 PF01292 Prokaryotic cytochrome b561 RPIC_RS14595 PF00206 Lyase RPIC_RS14595 PF08328 Adenylosuccinate lyase C-terminal RPIC_RS14600 PF00043 Glutathione S-transferase, C-terminal domain RPIC_RS14600 PF13417 Glutathione S-transferase, N-terminal domain RPIC_RS14605 PF01645 Conserved region in glutamate synthase RPIC_RS14615 PF00293 NUDIX domain RPIC_RS14620 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RPIC_RS14620 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RPIC_RS14625 PF02261 Aspartate decarboxylase RPIC_RS14630 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch RPIC_RS14635 PF02233 NAD(P) transhydrogenase beta subunit RPIC_RS14640 PF00072 Response regulator receiver domain RPIC_RS14650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS14650 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS14655 PF00989 PAS fold RPIC_RS14655 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS14655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS14660 PF00158 Sigma-54 interaction domain RPIC_RS14660 PF02954 Bacterial regulatory protein, Fis family RPIC_RS14660 PF00072 Response regulator receiver domain RPIC_RS14665 PF02926 THUMP domain RPIC_RS14665 PF01170 Putative RNA methylase family UPF0020 RPIC_RS14670 PF03653 Uncharacterised protein family (UPF0093) RPIC_RS14675 PF00171 Aldehyde dehydrogenase family RPIC_RS14690 PF08264 Anticodon-binding domain of tRNA RPIC_RS14690 PF00133 tRNA synthetases class I (I, L, M and V) RPIC_RS14690 PF13603 Leucyl-tRNA synthetase, Domain 2 RPIC_RS14690 PF09334 tRNA synthetases class I (M) RPIC_RS14695 PF01113 Dihydrodipicolinate reductase, N-terminus RPIC_RS14695 PF05173 Dihydrodipicolinate reductase, C-terminus RPIC_RS14700 PF04355 SmpA / OmlA family RPIC_RS14705 PF01475 Ferric uptake regulator family RPIC_RS14710 PF03466 LysR substrate binding domain RPIC_RS14710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS14715 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RPIC_RS14715 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RPIC_RS14720 PF02779 Transketolase, pyrimidine binding domain RPIC_RS14720 PF02780 Transketolase, C-terminal domain RPIC_RS14720 PF00456 Transketolase, thiamine diphosphate binding domain RPIC_RS14725 PF13378 Enolase C-terminal domain-like RPIC_RS14725 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RPIC_RS14730 PF01081 KDPG and KHG aldolase RPIC_RS14745 PF08450 SMP-30/Gluconolactonase/LRE-like region RPIC_RS14750 PF02653 Branched-chain amino acid transport system / permease component RPIC_RS14755 PF00005 ABC transporter RPIC_RS14760 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RPIC_RS14770 PF13609 Gram-negative porin RPIC_RS14775 PF03466 LysR substrate binding domain RPIC_RS14775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS14785 PF04452 RNA methyltransferase RPIC_RS14795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS14795 PF03466 LysR substrate binding domain RPIC_RS14800 PF00920 Dehydratase family RPIC_RS14805 PF00701 Dihydrodipicolinate synthetase family RPIC_RS14810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RPIC_RS14815 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RPIC_RS14820 PF00005 ABC transporter RPIC_RS14825 PF02653 Branched-chain amino acid transport system / permease component RPIC_RS14840 PF00390 Malic enzyme, N-terminal domain RPIC_RS14840 PF01515 Phosphate acetyl/butaryl transferase RPIC_RS14840 PF03949 Malic enzyme, NAD binding domain RPIC_RS14845 PF00586 AIR synthase related protein, N-terminal domain RPIC_RS14845 PF02769 AIR synthase related protein, C-terminal domain RPIC_RS14850 PF04608 Phosphatidylglycerophosphatase A RPIC_RS14855 PF18146 Damage-inducible protein CinA KH domain RPIC_RS14855 PF00994 Probable molybdopterin binding domain RPIC_RS14855 PF02464 Competence-damaged protein RPIC_RS14865 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RPIC_RS14870 PF01544 CorA-like Mg2+ transporter protein RPIC_RS14875 PF00912 Transglycosylase RPIC_RS14880 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RPIC_RS14880 PF01488 Shikimate / quinate 5-dehydrogenase RPIC_RS14880 PF08501 Shikimate dehydrogenase substrate binding domain RPIC_RS14890 PF00773 RNB domain RPIC_RS14895 PF04345 Chorismate lyase RPIC_RS14900 PF05728 Uncharacterised protein family (UPF0227) RPIC_RS14905 PF01225 Mur ligase family, catalytic domain RPIC_RS14905 PF02875 Mur ligase family, glutamate ligase domain RPIC_RS14905 PF08245 Mur ligase middle domain RPIC_RS14915 PF00085 Thioredoxin RPIC_RS14920 PF01220 Dehydroquinase class II RPIC_RS14925 PF00364 Biotin-requiring enzyme RPIC_RS14930 PF00289 Biotin carboxylase, N-terminal domain RPIC_RS14930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPIC_RS14930 PF02785 Biotin carboxylase C-terminal domain RPIC_RS14945 PF08534 Redoxin RPIC_RS14950 PF00294 pfkB family carbohydrate kinase RPIC_RS14985 PF02203 Tar ligand binding domain homologue RPIC_RS14985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC_RS14985 PF00672 HAMP domain RPIC_RS14995 PF00892 EamA-like transporter family RPIC_RS15005 PF00268 Ribonucleotide reductase, small chain RPIC_RS15010 PF00317 Ribonucleotide reductase, all-alpha domain RPIC_RS15010 PF03477 ATP cone domain RPIC_RS15010 PF02867 Ribonucleotide reductase, barrel domain RPIC_RS15025 PF05506 Domain of unknown function (DUF756) RPIC_RS15025 PF04185 Phosphoesterase family RPIC_RS15030 PF01510 N-acetylmuramoyl-L-alanine amidase RPIC_RS15035 PF02954 Bacterial regulatory protein, Fis family RPIC_RS15035 PF00072 Response regulator receiver domain RPIC_RS15035 PF00158 Sigma-54 interaction domain RPIC_RS15040 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS15040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS15055 PF00448 SRP54-type protein, GTPase domain RPIC_RS15055 PF02881 SRP54-type protein, helical bundle domain RPIC_RS15055 PF02978 Signal peptide binding domain RPIC_RS15060 PF00156 Phosphoribosyl transferase domain RPIC_RS15065 PF01914 MarC family integral membrane protein RPIC_RS15075 PF01464 Transglycosylase SLT domain RPIC_RS15080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RPIC_RS15080 PF04073 Aminoacyl-tRNA editing domain RPIC_RS15080 PF03129 Anticodon binding domain RPIC_RS15085 PF00293 NUDIX domain RPIC_RS15095 PF00696 Amino acid kinase family RPIC_RS15095 PF01472 PUA domain RPIC_RS15100 PF01018 GTP1/OBG RPIC_RS15100 PF01926 50S ribosome-binding GTPase RPIC_RS15105 PF01016 Ribosomal L27 protein RPIC_RS15110 PF00829 Ribosomal prokaryotic L21 protein RPIC_RS15115 PF00348 Polyprenyl synthetase RPIC_RS15125 PF03471 Transporter associated domain RPIC_RS15125 PF00571 CBS domain RPIC_RS15125 PF01595 Cyclin M transmembrane N-terminal domain RPIC_RS15130 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RPIC_RS15130 PF00437 Type II/IV secretion system protein RPIC_RS15135 PF00482 Type II secretion system (T2SS), protein F RPIC_RS15140 PF01478 Type IV leader peptidase family RPIC_RS15140 PF06750 Bacterial Peptidase A24 N-terminal domain RPIC_RS15145 PF01121 Dephospho-CoA kinase RPIC_RS15150 PF07072 Cell division protein RPIC_RS15155 PF03884 DNA gyrase inhibitor YacG RPIC_RS15160 PF00293 NUDIX domain RPIC_RS15170 PF01960 ArgJ family RPIC_RS15175 PF07517 SecA DEAD-like domain RPIC_RS15175 PF02810 SEC-C motif RPIC_RS15175 PF07516 SecA Wing and Scaffold domain RPIC_RS15175 PF01043 SecA preprotein cross-linking domain RPIC_RS15180 PF01551 Peptidase family M23 RPIC_RS15180 PF08525 Opacity-associated protein A N-terminal motif RPIC_RS15180 PF01476 LysM domain RPIC_RS15190 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RPIC_RS15195 PF08534 Redoxin RPIC_RS15200 PF00091 Tubulin/FtsZ family, GTPase domain RPIC_RS15200 PF12327 FtsZ family, C-terminal domain RPIC_RS15205 PF02491 SHS2 domain inserted in FTSA RPIC_RS15210 PF03799 Cell division protein FtsQ RPIC_RS15210 PF08478 POTRA domain, FtsQ-type RPIC_RS15215 PF07478 D-ala D-ala ligase C-terminus RPIC_RS15215 PF01820 D-ala D-ala ligase N-terminus RPIC_RS15220 PF08245 Mur ligase middle domain RPIC_RS15220 PF01225 Mur ligase family, catalytic domain RPIC_RS15220 PF02875 Mur ligase family, glutamate ligase domain RPIC_RS15225 PF03033 Glycosyltransferase family 28 N-terminal domain RPIC_RS15225 PF04101 Glycosyltransferase family 28 C-terminal domain RPIC_RS15230 PF01098 Cell cycle protein RPIC_RS15235 PF02875 Mur ligase family, glutamate ligase domain RPIC_RS15235 PF08245 Mur ligase middle domain RPIC_RS15240 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RPIC_RS15240 PF00953 Glycosyl transferase family 4 RPIC_RS15245 PF02875 Mur ligase family, glutamate ligase domain RPIC_RS15245 PF08245 Mur ligase middle domain RPIC_RS15245 PF01225 Mur ligase family, catalytic domain RPIC_RS15250 PF08245 Mur ligase middle domain RPIC_RS15250 PF02875 Mur ligase family, glutamate ligase domain RPIC_RS15255 PF00905 Penicillin binding protein transpeptidase domain RPIC_RS15255 PF03717 Penicillin-binding Protein dimerisation domain RPIC_RS15260 PF04999 Cell division protein FtsL RPIC_RS15265 PF01795 MraW methylase family RPIC_RS15270 PF02381 MraZ protein, putative antitoxin-like RPIC_RS15275 PF03232 Ubiquinone biosynthesis protein COQ7 RPIC_RS15280 PF13609 Gram-negative porin RPIC_RS15285 PF07690 Major Facilitator Superfamily RPIC_RS15285 PF00083 Sugar (and other) transporter RPIC_RS15290 PF00472 RF-1 domain RPIC_RS15295 PF03006 Haemolysin-III related RPIC_RS15300 PF13193 AMP-binding enzyme C-terminal domain RPIC_RS15300 PF00501 AMP-binding enzyme RPIC_RS15310 PF00384 Molybdopterin oxidoreductase RPIC_RS15310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RPIC_RS15310 PF01568 Molydopterin dinucleotide binding domain RPIC_RS15315 PF00356 Bacterial regulatory proteins, lacI family RPIC_RS15320 PF02896 PEP-utilising enzyme, TIM barrel domain RPIC_RS15320 PF00381 PTS HPr component phosphorylation site RPIC_RS15320 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RPIC_RS15320 PF05524 PEP-utilising enzyme, N-terminal RPIC_RS15320 PF00391 PEP-utilising enzyme, mobile domain RPIC_RS15325 PF00294 pfkB family carbohydrate kinase RPIC_RS15330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RPIC_RS15340 PF07687 Peptidase dimerisation domain RPIC_RS15340 PF01546 Peptidase family M20/M25/M40 RPIC_RS15345 PF01546 Peptidase family M20/M25/M40 RPIC_RS15345 PF07687 Peptidase dimerisation domain RPIC_RS15375 PF00378 Enoyl-CoA hydratase/isomerase RPIC_RS15380 PF00378 Enoyl-CoA hydratase/isomerase RPIC_RS15385 PF03061 Thioesterase superfamily RPIC_RS15390 PF00501 AMP-binding enzyme RPIC_RS15390 PF14535 AMP-binding enzyme C-terminal domain RPIC_RS15405 PF04379 ApaG domain RPIC_RS15410 PF00834 Ribulose-phosphate 3 epimerase family RPIC_RS15415 PF13419 Haloacid dehalogenase-like hydrolase RPIC_RS15420 PF04715 Anthranilate synthase component I, N terminal region RPIC_RS15420 PF00425 chorismate binding enzyme RPIC_RS15425 PF00117 Glutamine amidotransferase class-I RPIC_RS15435 PF00591 Glycosyl transferase family, a/b domain RPIC_RS15435 PF02885 Glycosyl transferase family, helical bundle domain RPIC_RS15440 PF00218 Indole-3-glycerol phosphate synthase RPIC_RS15450 PF03167 Uracil DNA glycosylase superfamily RPIC_RS15455 PF12805 FUSC-like inner membrane protein yccS RPIC_RS15460 PF13180 PDZ domain RPIC_RS15465 PF08240 Alcohol dehydrogenase GroES-like domain RPIC_RS15465 PF00107 Zinc-binding dehydrogenase RPIC_RS15470 PF13098 Thioredoxin-like domain RPIC_RS15470 PF10411 Disulfide bond isomerase protein N-terminus RPIC_RS15475 PF01494 FAD binding domain RPIC_RS15490 PF01464 Transglycosylase SLT domain RPIC_RS15500 PF01926 50S ribosome-binding GTPase RPIC_RS15500 PF06071 Protein of unknown function (DUF933) RPIC_RS15505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS15505 PF00360 Phytochrome region RPIC_RS15505 PF01590 GAF domain RPIC_RS15505 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS15505 PF08446 PAS fold RPIC_RS15510 PF00072 Response regulator receiver domain RPIC_RS15515 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS15515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS15515 PF01627 Hpt domain RPIC_RS15515 PF00072 Response regulator receiver domain RPIC_RS15515 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RPIC_RS15515 PF00672 HAMP domain RPIC_RS15525 PF01488 Shikimate / quinate 5-dehydrogenase RPIC_RS15525 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RPIC_RS15525 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RPIC_RS15530 PF03462 PCRF domain RPIC_RS15530 PF00472 RF-1 domain RPIC_RS15540 PF17827 PrmC N-terminal domain RPIC_RS15540 PF05175 Methyltransferase small domain RPIC_RS15545 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RPIC_RS15545 PF01348 Type II intron maturase RPIC_RS15550 PF00462 Glutaredoxin RPIC_RS15555 PF02441 Flavoprotein RPIC_RS15565 PF04349 Periplasmic glucan biosynthesis protein, MdoG RPIC_RS15570 PF00535 Glycosyl transferase family 2 RPIC_RS15590 PF12848 ABC transporter RPIC_RS15590 PF00005 ABC transporter RPIC_RS15595 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RPIC_RS15600 PF00510 Cytochrome c oxidase subunit III RPIC_RS15605 PF00115 Cytochrome C and Quinol oxidase polypeptide I RPIC_RS15610 PF06481 COX Aromatic Rich Motif RPIC_RS15610 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RPIC_RS15640 PF01381 Helix-turn-helix RPIC_RS15650 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) RPIC_RS15650 PF18766 SWI2/SNF2 ATPase RPIC_RS15650 PF11867 Domain of unknown function (DUF3387) RPIC_RS15655 PF01420 Type I restriction modification DNA specificity domain RPIC_RS15660 PF00580 UvrD/REP helicase N-terminal domain RPIC_RS15660 PF13361 UvrD-like helicase C-terminal domain RPIC_RS15670 PF02384 N-6 DNA Methylase RPIC_RS15670 PF12161 HsdM N-terminal domain RPIC_RS15680 PF02384 N-6 DNA Methylase RPIC_RS15790 PF00589 Phage integrase family RPIC_RS15800 PF04386 Stringent starvation protein B RPIC_RS15805 PF00043 Glutathione S-transferase, C-terminal domain RPIC_RS15805 PF02798 Glutathione S-transferase, N-terminal domain RPIC_RS15810 PF02167 Cytochrome C1 family RPIC_RS15815 PF00032 Cytochrome b(C-terminal)/b6/petD RPIC_RS15815 PF00033 Cytochrome b/b6/petB RPIC_RS15820 PF00355 Rieske [2Fe-2S] domain RPIC_RS15820 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal RPIC_RS15825 PF01741 Large-conductance mechanosensitive channel, MscL RPIC_RS15830 PF01784 NIF3 (NGG1p interacting factor 3) RPIC_RS15835 PF13180 PDZ domain RPIC_RS15845 PF13609 Gram-negative porin RPIC_RS15855 PF00072 Response regulator receiver domain RPIC_RS15855 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS15860 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS15860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS15860 PF08521 Two-component sensor kinase N-terminal RPIC_RS15870 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS15875 PF00005 ABC transporter RPIC_RS15875 PF08402 TOBE domain RPIC_RS15880 PF00902 Sec-independent protein translocase protein (TatC) RPIC_RS15885 PF02416 mttA/Hcf106 family RPIC_RS15890 PF02416 mttA/Hcf106 family RPIC_RS15900 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RPIC_RS15905 PF01502 Phosphoribosyl-AMP cyclohydrolase RPIC_RS15910 PF00977 Histidine biosynthesis protein RPIC_RS15915 PF00977 Histidine biosynthesis protein RPIC_RS15920 PF00117 Glutamine amidotransferase class-I RPIC_RS15925 PF01914 MarC family integral membrane protein RPIC_RS15930 PF00475 Imidazoleglycerol-phosphate dehydratase RPIC_RS15935 PF00155 Aminotransferase class I and II RPIC_RS15940 PF00815 Histidinol dehydrogenase RPIC_RS15945 PF01634 ATP phosphoribosyltransferase RPIC_RS15950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RPIC_RS15960 PF01061 ABC-2 type transporter RPIC_RS15965 PF00005 ABC transporter RPIC_RS15980 PF04333 MlaA lipoprotein RPIC_RS15985 PF02470 MlaD protein RPIC_RS15990 PF02405 Permease MlaE RPIC_RS15995 PF00005 ABC transporter RPIC_RS16000 PF03401 Tripartite tricarboxylate transporter family receptor RPIC_RS16005 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RPIC_RS16005 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC_RS16010 PF01645 Conserved region in glutamate synthase RPIC_RS16010 PF01493 GXGXG motif RPIC_RS16010 PF04898 Glutamate synthase central domain RPIC_RS16010 PF00310 Glutamine amidotransferases class-II RPIC_RS16020 PF03922 OmpW family RPIC_RS16025 PF13286 Phosphohydrolase-associated domain RPIC_RS16025 PF01966 HD domain RPIC_RS16030 PF01761 3-dehydroquinate synthase RPIC_RS16035 PF01202 Shikimate kinase RPIC_RS16040 PF00263 Bacterial type II and III secretion system protein RPIC_RS16040 PF03958 Bacterial type II/III secretion system short domain RPIC_RS16040 PF07660 Secretin and TonB N terminus short domain RPIC_RS16040 PF11741 AMIN domain RPIC_RS16055 PF05137 Fimbrial assembly protein (PilN) RPIC_RS16060 PF11104 Type IV pilus assembly protein PilM; RPIC_RS16065 PF00912 Transglycosylase RPIC_RS16065 PF00905 Penicillin binding protein transpeptidase domain RPIC_RS16065 PF17092 Penicillin-binding protein OB-like domain RPIC_RS16070 PF01491 Frataxin-like domain RPIC_RS16080 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RPIC_RS16080 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RPIC_RS16085 PF01794 Ferric reductase like transmembrane component RPIC_RS16090 PF00174 Oxidoreductase molybdopterin binding domain RPIC_RS16100 PF08281 Sigma-70, region 4 RPIC_RS16100 PF04542 Sigma-70 region 2 RPIC_RS16110 PF01578 Cytochrome C assembly protein RPIC_RS16115 PF05140 ResB-like family RPIC_RS16120 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPIC_RS16125 PF01926 50S ribosome-binding GTPase RPIC_RS16130 PF00490 Delta-aminolevulinic acid dehydratase RPIC_RS16135 PF02683 Cytochrome C biogenesis protein transmembrane region RPIC_RS16135 PF11412 Disulphide bond corrector protein DsbC RPIC_RS16145 PF01196 Ribosomal protein L17 RPIC_RS16150 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RPIC_RS16150 PF01000 RNA polymerase Rpb3/RpoA insert domain RPIC_RS16150 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RPIC_RS16155 PF00163 Ribosomal protein S4/S9 N-terminal domain RPIC_RS16155 PF01479 S4 domain RPIC_RS16160 PF00411 Ribosomal protein S11 RPIC_RS16165 PF00416 Ribosomal protein S13/S18 RPIC_RS16170 PF00444 Ribosomal protein L36 RPIC_RS16175 PF01176 Translation initiation factor 1A / IF-1 RPIC_RS16180 PF00344 SecY translocase RPIC_RS16185 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RPIC_RS16190 PF00327 Ribosomal protein L30p/L7e RPIC_RS16195 PF00333 Ribosomal protein S5, N-terminal domain RPIC_RS16195 PF03719 Ribosomal protein S5, C-terminal domain RPIC_RS16200 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RPIC_RS16205 PF00347 Ribosomal protein L6 RPIC_RS16210 PF00410 Ribosomal protein S8 RPIC_RS16215 PF00253 Ribosomal protein S14p/S29e RPIC_RS16220 PF00281 Ribosomal protein L5 RPIC_RS16220 PF00673 ribosomal L5P family C-terminus RPIC_RS16225 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RPIC_RS16230 PF00238 Ribosomal protein L14p/L23e RPIC_RS16235 PF00366 Ribosomal protein S17 RPIC_RS16240 PF00831 Ribosomal L29 protein RPIC_RS16245 PF00252 Ribosomal protein L16p/L10e RPIC_RS16250 PF00189 Ribosomal protein S3, C-terminal domain RPIC_RS16250 PF07650 KH domain RPIC_RS16255 PF00237 Ribosomal protein L22p/L17e RPIC_RS16260 PF00203 Ribosomal protein S19 RPIC_RS16265 PF00181 Ribosomal Proteins L2, RNA binding domain RPIC_RS16265 PF03947 Ribosomal Proteins L2, C-terminal domain RPIC_RS16270 PF00276 Ribosomal protein L23 RPIC_RS16275 PF00573 Ribosomal protein L4/L1 family RPIC_RS16280 PF00297 Ribosomal protein L3 RPIC_RS16285 PF00338 Ribosomal protein S10p/S20e RPIC_RS16290 PF00009 Elongation factor Tu GTP binding domain RPIC_RS16290 PF03143 Elongation factor Tu C-terminal domain RPIC_RS16290 PF03144 Elongation factor Tu domain 2 RPIC_RS16295 PF03144 Elongation factor Tu domain 2 RPIC_RS16295 PF00679 Elongation factor G C-terminus RPIC_RS16295 PF14492 Elongation Factor G, domain II RPIC_RS16295 PF03764 Elongation factor G, domain IV RPIC_RS16295 PF00009 Elongation factor Tu GTP binding domain RPIC_RS16300 PF00177 Ribosomal protein S7p/S5e RPIC_RS16305 PF00164 Ribosomal protein S12/S23 RPIC_RS16310 PF07690 Major Facilitator Superfamily RPIC_RS16315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS16315 PF03466 LysR substrate binding domain RPIC_RS16320 PF00270 DEAD/DEAH box helicase RPIC_RS16320 PF00271 Helicase conserved C-terminal domain RPIC_RS16320 PF16124 RecQ zinc-binding RPIC_RS16320 PF09382 RQC domain RPIC_RS16320 PF00570 HRDC domain RPIC_RS16330 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) RPIC_RS16335 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) RPIC_RS16340 PF08486 Stage II sporulation protein RPIC_RS16340 PF10062 Predicted secreted protein (DUF2300) RPIC_RS16345 PF01835 MG2 domain RPIC_RS16345 PF07703 Alpha-2-macroglobulin bait region domain RPIC_RS16345 PF00207 Alpha-2-macroglobulin family RPIC_RS16350 PF06672 Protein of unknown function (DUF1175) RPIC_RS16355 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) RPIC_RS16360 PF05000 RNA polymerase Rpb1, domain 4 RPIC_RS16360 PF04997 RNA polymerase Rpb1, domain 1 RPIC_RS16360 PF00623 RNA polymerase Rpb1, domain 2 RPIC_RS16360 PF04998 RNA polymerase Rpb1, domain 5 RPIC_RS16360 PF04983 RNA polymerase Rpb1, domain 3 RPIC_RS16365 PF04563 RNA polymerase beta subunit RPIC_RS16365 PF00562 RNA polymerase Rpb2, domain 6 RPIC_RS16365 PF04560 RNA polymerase Rpb2, domain 7 RPIC_RS16365 PF10385 RNA polymerase beta subunit external 1 domain RPIC_RS16365 PF04565 RNA polymerase Rpb2, domain 3 RPIC_RS16365 PF04561 RNA polymerase Rpb2, domain 2 RPIC_RS16370 PF16320 Ribosomal protein L7/L12 dimerisation domain RPIC_RS16370 PF00542 Ribosomal protein L7/L12 C-terminal domain RPIC_RS16375 PF00466 Ribosomal protein L10 RPIC_RS16380 PF00687 Ribosomal protein L1p/L10e family RPIC_RS16385 PF00298 Ribosomal protein L11, RNA binding domain RPIC_RS16385 PF03946 Ribosomal protein L11, N-terminal domain RPIC_RS16390 PF00467 KOW motif RPIC_RS16390 PF02357 Transcription termination factor nusG RPIC_RS16405 PF03143 Elongation factor Tu C-terminal domain RPIC_RS16405 PF03144 Elongation factor Tu domain 2 RPIC_RS16405 PF00009 Elongation factor Tu GTP binding domain RPIC_RS16425 PF13007 Transposase C of IS166 homeodomain RPIC_RS16425 PF03050 Transposase IS66 family RPIC_RS16425 PF13817 IS66 C-terminal element RPIC_RS16425 PF13005 zinc-finger binding domain of transposase IS66 RPIC_RS16470 PF00455 DeoR C terminal sensor domain RPIC_RS16470 PF08220 DeoR-like helix-turn-helix domain RPIC_RS16475 PF01266 FAD dependent oxidoreductase RPIC_RS16475 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RPIC_RS16480 PF08402 TOBE domain RPIC_RS16480 PF00005 ABC transporter RPIC_RS16485 PF17912 MalK OB fold domain RPIC_RS16485 PF00005 ABC transporter RPIC_RS16490 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS16495 PF00528 Binding-protein-dependent transport system inner membrane component RPIC_RS16510 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RPIC_RS16510 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RPIC_RS16525 PF04349 Periplasmic glucan biosynthesis protein, MdoG RPIC_RS16535 PF07690 Major Facilitator Superfamily RPIC_RS16570 PF01418 Helix-turn-helix domain, rpiR family RPIC_RS16570 PF01380 SIS domain RPIC_RS16575 PF13609 Gram-negative porin RPIC_RS16580 PF00924 Mechanosensitive ion channel RPIC_RS16585 PF07690 Major Facilitator Superfamily RPIC_RS16620 PF01545 Cation efflux family RPIC_RS16620 PF16916 Dimerisation domain of Zinc Transporter RPIC_RS16625 PF00072 Response regulator receiver domain RPIC_RS16625 PF00196 Bacterial regulatory proteins, luxR family RPIC_RS16630 PF09456 RcsC Alpha-Beta-Loop (ABL) RPIC_RS16630 PF00072 Response regulator receiver domain RPIC_RS16630 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS16630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS16635 PF00743 Flavin-binding monooxygenase-like RPIC_RS16640 PF00106 short chain dehydrogenase RPIC_RS16645 PF00561 alpha/beta hydrolase fold RPIC_RS16655 PF13411 MerR HTH family regulatory protein RPIC_RS16675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RPIC_RS16685 PF00155 Aminotransferase class I and II RPIC_RS16690 PF01355 High potential iron-sulfur protein RPIC_RS16695 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS16695 PF00072 Response regulator receiver domain RPIC_RS16700 PF03401 Tripartite tricarboxylate transporter family receptor RPIC_RS16705 PF13609 Gram-negative porin RPIC_RS16715 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RPIC_RS16715 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RPIC_RS16720 PF00941 FAD binding domain in molybdopterin dehydrogenase RPIC_RS16720 PF03450 CO dehydrogenase flavoprotein C-terminal domain RPIC_RS16725 PF01799 [2Fe-2S] binding domain RPIC_RS16725 PF00111 2Fe-2S iron-sulfur cluster binding domain RPIC_RS16730 PF07687 Peptidase dimerisation domain RPIC_RS16730 PF01546 Peptidase family M20/M25/M40 RPIC_RS16740 PF02254 TrkA-N domain RPIC_RS16740 PF00999 Sodium/hydrogen exchanger family RPIC_RS16745 PF02525 Flavodoxin-like fold RPIC_RS16770 PF01037 Lrp/AsnC ligand binding domain RPIC_RS16775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPIC_RS16790 PF08334 Type II secretion system (T2SS), protein G RPIC_RS16790 PF07963 Prokaryotic N-terminal methylation motif RPIC_RS16800 PF02501 Type II secretion system (T2SS), protein I RPIC_RS16800 PF07963 Prokaryotic N-terminal methylation motif RPIC_RS16805 PF07963 Prokaryotic N-terminal methylation motif RPIC_RS16805 PF11612 Type II secretion system (T2SS), protein J RPIC_RS16830 PF00263 Bacterial type II and III secretion system protein RPIC_RS16830 PF03958 Bacterial type II/III secretion system short domain RPIC_RS16835 PF00437 Type II/IV secretion system protein RPIC_RS16840 PF00482 Type II secretion system (T2SS), protein F RPIC_RS16850 PF00392 Bacterial regulatory proteins, gntR family RPIC_RS16850 PF00155 Aminotransferase class I and II RPIC_RS16860 PF00929 Exonuclease RPIC_RS16860 PF08411 Exonuclease C-terminal RPIC_RS16865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RPIC_RS16865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RPIC_RS16875 PF13545 Crp-like helix-turn-helix domain RPIC_RS16875 PF00027 Cyclic nucleotide-binding domain RPIC_RS16885 PF13609 Gram-negative porin RPIC_RS16890 PF00196 Bacterial regulatory proteins, luxR family RPIC_RS16890 PF00072 Response regulator receiver domain RPIC_RS16895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC_RS16895 PF00672 HAMP domain RPIC_RS16895 PF02203 Tar ligand binding domain homologue RPIC_RS16910 PF00106 short chain dehydrogenase RPIC_RS16920 PF00196 Bacterial regulatory proteins, luxR family RPIC_RS16920 PF00072 Response regulator receiver domain RPIC_RS16925 PF13180 PDZ domain RPIC_RS16940 PF07690 Major Facilitator Superfamily RPIC_RS16945 PF01569 PAP2 superfamily RPIC_RS16955 PF07730 Histidine kinase RPIC_RS16955 PF17200 Single Cache domain 2 RPIC_RS16970 PF00118 TCP-1/cpn60 chaperonin family RPIC_RS16975 PF00166 Chaperonin 10 Kd subunit RPIC_RS16985 PF00011 Hsp20/alpha crystallin family RPIC_RS16990 PF00011 Hsp20/alpha crystallin family RPIC_RS17030 PF07859 alpha/beta hydrolase fold RPIC_RS17050 PF01047 MarR family RPIC_RS17055 PF02566 OsmC-like protein RPIC_RS17060 PF07859 alpha/beta hydrolase fold RPIC_RS17065 PF00012 Hsp70 protein RPIC_RS17085 PF12008 Type I restriction and modification enzyme - subunit R C terminal RPIC_RS17085 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) RPIC_RS17085 PF18766 SWI2/SNF2 ATPase RPIC_RS17095 PF00149 Calcineurin-like phosphoesterase RPIC_RS17095 PF02872 5'-nucleotidase, C-terminal domain RPIC_RS17100 PF08534 Redoxin RPIC_RS17135 PF00892 EamA-like transporter family RPIC_RS17140 PF10518 TAT (twin-arginine translocation) pathway signal sequence RPIC_RS17140 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC_RS17140 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding RPIC_RS17150 PF04972 BON domain RPIC_RS17155 PF02021 Uncharacterised protein family UPF0102 RPIC_RS17160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RPIC_RS17165 PF03330 Lytic transglycolase RPIC_RS17165 PF05036 Sporulation related domain RPIC_RS17170 PF00753 Metallo-beta-lactamase superfamily RPIC_RS17185 PF03960 ArsC family RPIC_RS17190 PF01546 Peptidase family M20/M25/M40 RPIC_RS17190 PF07687 Peptidase dimerisation domain RPIC_RS17195 PF04115 Ureidoglycolate lyase RPIC_RS17200 PF03561 Allantoicase repeat RPIC_RS17205 PF00375 Sodium:dicarboxylate symporter family RPIC_RS17215 PF01205 Uncharacterized protein family UPF0029 RPIC_RS17215 PF09186 Domain of unknown function (DUF1949) RPIC_RS17225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS17225 PF03466 LysR substrate binding domain RPIC_RS17230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RPIC_RS17230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RPIC_RS17230 PF00205 Thiamine pyrophosphate enzyme, central domain RPIC_RS17235 PF01261 Xylose isomerase-like TIM barrel RPIC_RS17245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RPIC_RS17245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RPIC_RS17250 PF13660 Domain of unknown function (DUF4147) RPIC_RS17250 PF05161 MOFRL family RPIC_RS17255 PF00224 Pyruvate kinase, barrel domain RPIC_RS17255 PF02887 Pyruvate kinase, alpha/beta domain RPIC_RS17260 PF04055 Radical SAM superfamily RPIC_RS17260 PF06969 HemN C-terminal domain RPIC_RS17270 PF00580 UvrD/REP helicase N-terminal domain RPIC_RS17270 PF13361 UvrD-like helicase C-terminal domain RPIC_RS17280 PF08669 Glycine cleavage T-protein C-terminal barrel domain RPIC_RS17280 PF01571 Aminomethyltransferase folate-binding domain RPIC_RS17285 PF01597 Glycine cleavage H-protein RPIC_RS17290 PF02347 Glycine cleavage system P-protein RPIC_RS17295 PF03315 Serine dehydratase beta chain RPIC_RS17295 PF03313 Serine dehydratase alpha chain RPIC_RS17300 PF03169 OPT oligopeptide transporter protein RPIC_RS17310 PF04107 Glutamate-cysteine ligase family 2(GCS2) RPIC_RS17320 PF13458 Periplasmic binding protein RPIC_RS17325 PF14850 DNA-binding domain of Proline dehydrogenase RPIC_RS17325 PF00171 Aldehyde dehydrogenase family RPIC_RS17325 PF18327 Proline utilization A proline dehydrogenase N-terminal domain RPIC_RS17325 PF01619 Proline dehydrogenase RPIC_RS17330 PF00270 DEAD/DEAH box helicase RPIC_RS17330 PF00271 Helicase conserved C-terminal domain RPIC_RS17330 PF17764 3′ DNA-binding domain (3′BD) RPIC_RS17330 PF18074 Primosomal protein N C-terminal domain RPIC_RS17330 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RPIC_RS17335 PF01208 Uroporphyrinogen decarboxylase (URO-D) RPIC_RS17350 PF02743 Cache domain RPIC_RS17350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RPIC_RS17350 PF00672 HAMP domain RPIC_RS17355 PF04116 Fatty acid hydroxylase superfamily RPIC_RS17370 PF12849 PBP superfamily domain RPIC_RS17380 PF07859 alpha/beta hydrolase fold RPIC_RS17385 PF13380 CoA binding domain RPIC_RS17400 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain RPIC_RS17400 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RPIC_RS17405 PF02874 ATP synthase alpha/beta family, beta-barrel domain RPIC_RS17405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RPIC_RS17410 PF00231 ATP synthase RPIC_RS17415 PF02874 ATP synthase alpha/beta family, beta-barrel domain RPIC_RS17415 PF00306 ATP synthase alpha/beta chain, C terminal domain RPIC_RS17415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RPIC_RS17420 PF00213 ATP synthase delta (OSCP) subunit RPIC_RS17425 PF00430 ATP synthase B/B' CF(0) RPIC_RS17430 PF00137 ATP synthase subunit C RPIC_RS17435 PF00119 ATP synthase A chain RPIC_RS17445 PF02195 ParB-like nuclease domain RPIC_RS17445 PF17762 HTH domain found in ParB protein RPIC_RS17450 PF13614 AAA domain RPIC_RS17455 PF02527 rRNA small subunit methyltransferase G RPIC_RS17460 PF13932 GidA associated domain RPIC_RS17460 PF01134 Glucose inhibited division protein A RPIC_RS17485 PF12843 Putative quorum-sensing-regulated virulence factor RPIC_RS17490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS17490 PF03466 LysR substrate binding domain RPIC_RS17495 PF00106 short chain dehydrogenase RPIC_RS17505 PF03079 ARD/ARD' family RPIC_RS17510 PF01925 Sulfite exporter TauE/SafE RPIC_RS17530 PF02653 Branched-chain amino acid transport system / permease component RPIC_RS17540 PF00005 ABC transporter RPIC_RS17545 PF00005 ABC transporter RPIC_RS17545 PF12399 Branched-chain amino acid ATP-binding cassette transporter RPIC_RS17550 PF00732 GMC oxidoreductase RPIC_RS17550 PF05199 GMC oxidoreductase RPIC_RS17555 PF12146 Serine aminopeptidase, S33 RPIC_RS17555 PF12147 Putative methyltransferase RPIC_RS17560 PF00376 MerR family regulatory protein RPIC_RS17560 PF09278 MerR, DNA binding RPIC_RS17565 PF00403 Heavy-metal-associated domain RPIC_RS17575 PF03922 OmpW family RPIC_RS17580 PF02423 Ornithine cyclodeaminase/mu-crystallin family RPIC_RS17585 PF07947 YhhN family RPIC_RS17590 PF01037 Lrp/AsnC ligand binding domain RPIC_RS17595 PF00351 Biopterin-dependent aromatic amino acid hydroxylase RPIC_RS17600 PF01329 Pterin 4 alpha carbinolamine dehydratase RPIC_RS17610 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS17610 PF00072 Response regulator receiver domain RPIC_RS17615 PF08521 Two-component sensor kinase N-terminal RPIC_RS17615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS17615 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS17625 PF00216 Bacterial DNA-binding protein RPIC_RS17635 PF00596 Class II Aldolase and Adducin N-terminal domain RPIC_RS17640 PF02558 Ketopantoate reductase PanE/ApbA RPIC_RS17640 PF08546 Ketopantoate reductase PanE/ApbA C terminal RPIC_RS17645 PF08238 Sel1 repeat RPIC_RS17650 PF02872 5'-nucleotidase, C-terminal domain RPIC_RS17650 PF00149 Calcineurin-like phosphoesterase RPIC_RS17655 PF03775 Septum formation inhibitor MinC, C-terminal domain RPIC_RS17655 PF05209 Septum formation inhibitor MinC, N-terminal domain RPIC_RS17660 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RPIC_RS17665 PF03776 Septum formation topological specificity factor MinE RPIC_RS17670 PF00285 Citrate synthase, C-terminal domain RPIC_RS17675 PF02515 CoA-transferase family III RPIC_RS17680 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ RPIC_RS17685 PF03976 Polyphosphate kinase 2 (PPK2) RPIC_RS17690 PF00708 Acylphosphatase RPIC_RS17700 PF00005 ABC transporter RPIC_RS17705 PF05426 Alginate lyase RPIC_RS17715 PF09828 Chromate resistance exported protein RPIC_RS17720 PF02417 Chromate transporter RPIC_RS17740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RPIC_RS17745 PF01451 Low molecular weight phosphotyrosine protein phosphatase RPIC_RS17750 PF00230 Major intrinsic protein RPIC_RS17755 PF00561 alpha/beta hydrolase fold RPIC_RS17780 PF04607 Region found in RelA / SpoT proteins RPIC_RS17800 PF03814 Potassium-transporting ATPase A subunit RPIC_RS17810 PF02669 K+-transporting ATPase, c chain RPIC_RS17815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS17815 PF13493 Domain of unknown function (DUF4118) RPIC_RS17815 PF02702 Osmosensitive K+ channel His kinase sensor domain RPIC_RS17815 PF13492 GAF domain RPIC_RS17815 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS17820 PF03180 NLPA lipoprotein RPIC_RS17825 PF00672 HAMP domain RPIC_RS17825 PF00563 EAL domain RPIC_RS17825 PF17154 Gammaproteobacterial periplasmic sensor domain RPIC_RS17825 PF00990 Diguanylate cyclase, GGDEF domain RPIC_RS17830 PF00196 Bacterial regulatory proteins, luxR family RPIC_RS17830 PF00072 Response regulator receiver domain RPIC_RS17835 PF00230 Major intrinsic protein RPIC_RS17840 PF07690 Major Facilitator Superfamily RPIC_RS17850 PF00857 Isochorismatase family RPIC_RS17870 PF00072 Response regulator receiver domain RPIC_RS17870 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS17875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS17875 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS17890 PF02082 Transcriptional regulator RPIC_RS17895 PF00042 Globin RPIC_RS17895 PF00970 Oxidoreductase FAD-binding domain RPIC_RS17895 PF00175 Oxidoreductase NAD-binding domain RPIC_RS17905 PF00155 Aminotransferase class I and II RPIC_RS17905 PF00392 Bacterial regulatory proteins, gntR family RPIC_RS17910 PF02627 Carboxymuconolactone decarboxylase family RPIC_RS17925 PF03466 LysR substrate binding domain RPIC_RS17925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS17930 PF01118 Semialdehyde dehydrogenase, NAD binding domain RPIC_RS17935 PF05899 Protein of unknown function (DUF861) RPIC_RS17935 PF07883 Cupin domain RPIC_RS17945 PF00665 Integrase core domain RPIC_RS17945 PF13333 Integrase core domain RPIC_RS17945 PF13276 HTH-like domain RPIC_RS17970 PF08521 Two-component sensor kinase N-terminal RPIC_RS17970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS17970 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS17975 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS17975 PF00072 Response regulator receiver domain RPIC_RS18025 PF03466 LysR substrate binding domain RPIC_RS18025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS18030 PF00732 GMC oxidoreductase RPIC_RS18030 PF05199 GMC oxidoreductase RPIC_RS18035 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC_RS18040 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC_RS18040 PF18158 Adaptive response protein AidB N-terminal domain RPIC_RS18040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC_RS18050 PF03060 Nitronate monooxygenase RPIC_RS18055 PF13667 ThiC-associated domain RPIC_RS18055 PF01964 Radical SAM ThiC family RPIC_RS18060 PF01266 FAD dependent oxidoreductase RPIC_RS18070 PF05690 Thiazole biosynthesis protein ThiG RPIC_RS18075 PF02581 Thiamine monophosphate synthase RPIC_RS18080 PF06983 3-demethylubiquinone-9 3-methyltransferase RPIC_RS18100 PF08543 Phosphomethylpyrimidine kinase RPIC_RS18115 PF00245 Alkaline phosphatase RPIC_RS18120 PF00245 Alkaline phosphatase RPIC_RS18130 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RPIC_RS18130 PF05221 S-adenosyl-L-homocysteine hydrolase RPIC_RS18135 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV RPIC_RS18140 PF02219 Methylenetetrahydrofolate reductase RPIC_RS18155 PF01812 5-formyltetrahydrofolate cyclo-ligase family RPIC_RS18160 PF01464 Transglycosylase SLT domain RPIC_RS18160 PF14718 Soluble lytic murein transglycosylase L domain RPIC_RS18170 PF00043 Glutathione S-transferase, C-terminal domain RPIC_RS18170 PF13417 Glutathione S-transferase, N-terminal domain RPIC_RS18175 PF01743 Poly A polymerase head domain RPIC_RS18175 PF01966 HD domain RPIC_RS18175 PF12627 Probable RNA and SrmB- binding site of polymerase A RPIC_RS18180 PF00497 Bacterial extracellular solute-binding proteins, family 3 RPIC_RS18185 PF05853 beta-keto acid cleavage enzyme RPIC_RS18190 PF00202 Aminotransferase class-III RPIC_RS18210 PF00158 Sigma-54 interaction domain RPIC_RS18210 PF00072 Response regulator receiver domain RPIC_RS18210 PF02954 Bacterial regulatory protein, Fis family RPIC_RS18215 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS18215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS18215 PF00672 HAMP domain RPIC_RS18215 PF00989 PAS fold RPIC_RS18225 PF01029 NusB family RPIC_RS18225 PF01189 16S rRNA methyltransferase RsmB/F RPIC_RS18230 PF01435 Peptidase family M48 RPIC_RS18235 PF01810 LysE type translocator RPIC_RS18240 PF02911 Formyl transferase, C-terminal domain RPIC_RS18240 PF00551 Formyl transferase RPIC_RS18250 PF01327 Polypeptide deformylase RPIC_RS18255 PF01476 LysM domain RPIC_RS18260 PF17782 DprA winged helix domain RPIC_RS18260 PF02481 DNA recombination-mediator protein A RPIC_RS18270 PF01131 DNA topoisomerase RPIC_RS18270 PF01751 Toprim domain RPIC_RS18275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RPIC_RS18275 PF03466 LysR substrate binding domain RPIC_RS18280 PF00501 AMP-binding enzyme RPIC_RS18280 PF13193 AMP-binding enzyme C-terminal domain RPIC_RS18285 PF01098 Cell cycle protein RPIC_RS18290 PF03717 Penicillin-binding Protein dimerisation domain RPIC_RS18290 PF00905 Penicillin binding protein transpeptidase domain RPIC_RS18300 PF04085 rod shape-determining protein MreC RPIC_RS18310 PF02686 Glu-tRNAGln amidotransferase C subunit RPIC_RS18315 PF01425 Amidase RPIC_RS18330 PF02637 GatB domain RPIC_RS18330 PF02934 GatB/GatE catalytic domain RPIC_RS18340 PF00589 Phage integrase family RPIC_RS18340 PF02899 Phage integrase, N-terminal SAM-like domain RPIC_RS18345 PF10672 S-adenosylmethionine-dependent methyltransferase RPIC_RS18345 PF17785 PUA-like domain RPIC_RS18355 PF08031 Berberine and berberine like RPIC_RS18355 PF01565 FAD binding domain RPIC_RS18360 PF10282 Lactonase, 7-bladed beta-propeller RPIC_RS18370 PF07683 Cobalamin synthesis protein cobW C-terminal domain RPIC_RS18370 PF02492 CobW/HypB/UreG, nucleotide-binding domain RPIC_RS18375 PF01258 Prokaryotic dksA/traR C4-type zinc finger RPIC_RS18380 PF02492 CobW/HypB/UreG, nucleotide-binding domain RPIC_RS18380 PF07683 Cobalamin synthesis protein cobW C-terminal domain RPIC_RS18385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RPIC_RS18390 PF00227 Proteasome subunit RPIC_RS18395 PF00004 ATPase family associated with various cellular activities (AAA) RPIC_RS18395 PF07724 AAA domain (Cdc48 subfamily) RPIC_RS18410 PF00072 Response regulator receiver domain RPIC_RS18415 PF00512 His Kinase A (phospho-acceptor) domain RPIC_RS18415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RPIC_RS18435 PF04542 Sigma-70 region 2 RPIC_RS18435 PF08281 Sigma-70, region 4 RPIC_RS18440 PF00696 Amino acid kinase family RPIC_RS18450 PF00440 Bacterial regulatory proteins, tetR family RPIC_RS18455 PF00392 Bacterial regulatory proteins, gntR family RPIC_RS18455 PF00155 Aminotransferase class I and II RPIC_RS18460 PF00202 Aminotransferase class-III RPIC_RS18465 PF00171 Aldehyde dehydrogenase family RPIC_RS18470 PF00561 alpha/beta hydrolase fold RPIC_RS18485 PF04328 Selenoprotein, putative RPIC_RS18490 PF13722 5TM C-terminal transporter carbon starvation CstA RPIC_RS18490 PF02554 Carbon starvation protein CstA RPIC_RS18495 PF07730 Histidine kinase RPIC_RS18495 PF17200 Single Cache domain 2 RPIC_RS18500 PF00072 Response regulator receiver domain RPIC_RS18500 PF00196 Bacterial regulatory proteins, luxR family RPIC_RS18505 PF01370 NAD dependent epimerase/dehydratase family RPIC_RS18510 PF00392 Bacterial regulatory proteins, gntR family RPIC_RS18510 PF07729 FCD domain RPIC_RS18515 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RPIC_RS18515 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RPIC_RS18520 PF17042 Nucleotide-binding C-terminal domain RPIC_RS18520 PF07005 Sugar-binding N-terminal domain RPIC_RS18525 PF00596 Class II Aldolase and Adducin N-terminal domain RPIC_RS18530 PF07690 Major Facilitator Superfamily RPIC_RS18535 PF01261 Xylose isomerase-like TIM barrel RPIC_RS18540 PF00486 Transcriptional regulatory protein, C terminal RPIC_RS18540 PF00072 Response regulator receiver domain RPIC_RS18545 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain RPIC_RS18545 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain RPIC_RS18550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RPIC_RS18550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RPIC_RS18555 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RPIC_RS18560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RPIC_RS18560 PF07992 Pyridine nucleotide-disulphide oxidoreductase RPIC_RS18570 PF00440 Bacterial regulatory proteins, tetR family RPIC_RS18570 PF08361 MAATS-type transcriptional repressor, C-terminal region RPIC_RS18575 PF00529 HlyD membrane-fusion protein of T1SS RPIC_RS18575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RPIC_RS18580 PF00873 AcrB/AcrD/AcrF family RPIC_RS18585 PF02321 Outer membrane efflux protein RPIC_RS18595 PF01165 Ribosomal protein S21 RPIC_RS18615 PF00293 NUDIX domain RPIC_RS18620 PF10396 GTP-binding protein TrmE N-terminus RPIC_RS18620 PF12631 MnmE helical domain RPIC_RS18620 PF01926 50S ribosome-binding GTPase RPIC_RS18630 PF14849 YidC periplasmic domain RPIC_RS18630 PF02096 60Kd inner membrane protein RPIC_RS18635 PF00825 Ribonuclease P RPIC_RS18640 PF00468 Ribosomal protein L34 RPIC_RS19010 PF00107 Zinc-binding dehydrogenase RPIC_RS19010 PF08240 Alcohol dehydrogenase GroES-like domain RPIC_RS19205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RPIC_RS19205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RPIC_RS19205 PF02770 Acyl-CoA dehydrogenase, middle domain RPIC_RS19250 PF18140 Propionyl-coenzyme A carboxylase BT domain RPIC_RS19250 PF00364 Biotin-requiring enzyme RPIC_RS19250 PF02785 Biotin carboxylase C-terminal domain RPIC_RS19250 PF00289 Biotin carboxylase, N-terminal domain RPIC_RS19250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RPIC_RS20015 PF04055 Radical SAM superfamily RPIC_RS20015 PF13186 Iron-sulfur cluster-binding domain RPIC_RS20185 PF06472 ABC transporter transmembrane region 2 RPIC_RS20185 PF00005 ABC transporter RPIC_RS20335 PF00664 ABC transporter transmembrane region RPIC_RS20335 PF00005 ABC transporter RPIC_RS20535 PF09312 SurA N-terminal domain RPIC_RS20580 PF02092 Glycyl-tRNA synthetase beta subunit RPIC_RS20580 PF05746 DALR anticodon binding domain RPIC_RS20675 PF00270 DEAD/DEAH box helicase RPIC_RS20675 PF00271 Helicase conserved C-terminal domain RPIC_RS20970 PF00892 EamA-like transporter family RPIC_RS20975 PF00162 Phosphoglycerate kinase RPIC_RS21065 PF00990 Diguanylate cyclase, GGDEF domain RPIC_RS21065 PF00563 EAL domain RPIC_RS21065 PF03707 Bacterial signalling protein N terminal repeat RPIC_RS21305 PF17042 Nucleotide-binding C-terminal domain RPIC_RS21305 PF07005 Sugar-binding N-terminal domain RPIC_RS21500 PF00072 Response regulator receiver domain RPIC_RS21625 PF00535 Glycosyl transferase family 2 RPIC_RS22040 PF00749 tRNA synthetases class I (E and Q), catalytic domain RPIC_RS22040 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RPIC_RS22055 PF00561 alpha/beta hydrolase fold RPIC_RS22170 PF00577 Outer membrane usher protein RPIC_RS22170 PF13954 PapC N-terminal domain RPIC_RS22170 PF13953 PapC C-terminal domain RPIC_RS22445 PF00303 Thymidylate synthase RPIC_RS23010 PF02151 UvrB/uvrC motif RPIC_RS23010 PF01541 GIY-YIG catalytic domain RPIC_RS23010 PF08459 UvrC Helix-hairpin-helix N-terminal RPIC_RS23075 PF17137 Domain of unknown function (DUF5110) RPIC_RS23075 PF16338 Domain of unknown function (DUF4968) RPIC_RS23075 PF13802 Galactose mutarotase-like RPIC_RS23075 PF01055 Glycosyl hydrolases family 31 RPIC_RS23310 PF00149 Calcineurin-like phosphoesterase RPIC_RS23330 PF09190 DALR domain RPIC_RS23330 PF01406 tRNA synthetases class I (C) catalytic domain RPIC_RS23665 PF13360 PQQ-like domain RPIC_RS23670 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RPIC_RS23670 PF01926 50S ribosome-binding GTPase RPIC_RS23730 PF00923 Transaldolase/Fructose-6-phosphate aldolase RPIC_RS23845 PF17912 MalK OB fold domain RPIC_RS23845 PF00005 ABC transporter RPIC_RS23975 PF07690 Major Facilitator Superfamily RPIC_RS24160 PF16363 GDP-mannose 4,6 dehydratase RPIC_RS24270 PF01546 Peptidase family M20/M25/M40 RPIC_RS24310 PF01384 Phosphate transporter family RPIC_RS24400 PF10605 3HB-oligomer hydrolase (3HBOH) RPIC_RS24455 PF11638 DnaA N-terminal domain RPIC_RS24455 PF08299 Bacterial dnaA protein helix-turn-helix RPIC_RS24455 PF00308 Bacterial dnaA protein RPIC_RS24770 PF00202 Aminotransferase class-III RPIC_RS24940 PF03466 LysR substrate binding domain RPIC_RS24940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family